-- dump date 20140619_102555 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_001228792.1 148262086 5163840 46..1395 1 NC_009483.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1395 dnaA 5163840 dnaA Geobacter uraniireducens Rf4 chromosomal replication initiation protein YP_001228792.1 46 D 351605 CDS YP_001228793.1 148262087 5166118 1611..2729 1 NC_009483.1 TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain; DNA polymerase III subunit beta 2729 5166118 Gura_0002 Geobacter uraniireducens Rf4 DNA polymerase III subunit beta YP_001228793.1 1611 D 351605 CDS YP_001228794.1 148262088 5164517 2810..3904 1 NC_009483.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 3904 recF 5164517 recF Geobacter uraniireducens Rf4 recombination protein F YP_001228794.1 2810 D 351605 CDS YP_001228795.1 148262089 5164518 3913..6297 1 NC_009483.1 TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein; TOPRIM domain protein; DNA topoisomerase, type IIA, subunit B, region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B 6297 5164518 Gura_0004 Geobacter uraniireducens Rf4 DNA gyrase subunit B YP_001228795.1 3913 D 351605 CDS YP_001228796.1 148262090 5164519 6355..8853 1 NC_009483.1 TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; DNA gyrase subunit A 8853 5164519 Gura_0005 Geobacter uraniireducens Rf4 DNA gyrase subunit A YP_001228796.1 6355 D 351605 CDS YP_001228797.1 148262091 5164520 8937..10517 1 NC_009483.1 hypothetical protein 10517 5164520 Gura_0006 Geobacter uraniireducens Rf4 hypothetical protein YP_001228797.1 8937 D 351605 CDS YP_001228798.1 148262092 5163642 10587..11600 1 NC_009483.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 11600 gpsA 5163642 gpsA Geobacter uraniireducens Rf4 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_001228798.1 10587 D 351605 CDS YP_001228799.1 148262093 5163643 11698..13974 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 13974 5163643 Gura_0008 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001228799.1 11698 D 351605 CDS YP_001228800.1 148262094 5163644 13961..15487 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 15487 5163644 Gura_0009 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001228800.1 13961 D 351605 CDS YP_001228801.1 148262095 5163645 15519..17333 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 17333 5163645 Gura_0010 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001228801.1 15519 D 351605 CDS YP_001228802.1 148262096 5164066 17330..19510 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 19510 5164066 Gura_0011 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001228802.1 17330 D 351605 CDS YP_001228803.1 148262097 5164067 19507..20433 1 NC_009483.1 TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; daunorubicin resistance ABC transporter ATPase 20433 5164067 Gura_0012 Geobacter uraniireducens Rf4 daunorubicin resistance ABC transporter ATPase YP_001228803.1 19507 D 351605 CDS YP_001228804.1 148262098 5164068 20508..21263 1 NC_009483.1 PFAM: ABC-2 type transporter; ABC-2 type transporter 21263 5164068 Gura_0013 Geobacter uraniireducens Rf4 ABC-2 type transporter YP_001228804.1 20508 D 351605 CDS YP_001228805.1 148262099 5164069 21393..22466 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 22466 5164069 Gura_0014 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001228805.1 21393 D 351605 CDS YP_001228806.1 148262100 5164073 22609..23628 1 NC_009483.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 23628 hemE 5164073 hemE Geobacter uraniireducens Rf4 uroporphyrinogen decarboxylase YP_001228806.1 22609 D 351605 CDS YP_001228807.1 148262101 5164074 23781..24599 1 NC_009483.1 hypothetical protein 24599 5164074 Gura_0016 Geobacter uraniireducens Rf4 hypothetical protein YP_001228807.1 23781 D 351605 CDS YP_001228808.1 148262102 5164075 complement(24612..26720) 1 NC_009483.1 PFAM: protein of unknown function DUF323; Methyltransferase type 11; Methyltransferase type 12; hypothetical protein 26720 5164075 Gura_0017 Geobacter uraniireducens Rf4 hypothetical protein YP_001228808.1 24612 R 351605 CDS YP_001228809.1 148262103 5164076 complement(26740..27750) 1 NC_009483.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 27750 5164076 Gura_0018 Geobacter uraniireducens Rf4 alcohol dehydrogenase YP_001228809.1 26740 R 351605 CDS YP_001228810.1 148262104 5165249 27963..28475 1 NC_009483.1 hypothetical protein 28475 5165249 Gura_0019 Geobacter uraniireducens Rf4 hypothetical protein YP_001228810.1 27963 D 351605 CDS YP_001228811.1 148262105 5165250 complement(28392..29837) 1 NC_009483.1 PFAM: heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein 29837 5165250 Gura_0020 Geobacter uraniireducens Rf4 heat shock protein DnaJ domain-containing protein YP_001228811.1 28392 R 351605 CDS YP_001228812.1 148262106 5165251 29988..30263 1 NC_009483.1 hypothetical protein 30263 5165251 Gura_0021 Geobacter uraniireducens Rf4 hypothetical protein YP_001228812.1 29988 D 351605 CDS YP_001228813.1 148262107 5165252 complement(30334..31056) 1 NC_009483.1 PFAM: Hsp33 protein; Hsp33 protein 31056 5165252 Gura_0022 Geobacter uraniireducens Rf4 Hsp33 protein YP_001228813.1 30334 R 351605 CDS YP_001228814.1 148262108 5166084 complement(31207..31740) 1 NC_009483.1 hypothetical protein 31740 5166084 Gura_0023 Geobacter uraniireducens Rf4 hypothetical protein YP_001228814.1 31207 R 351605 CDS YP_001228815.1 148262109 5166085 complement(31893..34271) 1 NC_009483.1 PFAM: peptidase U32; peptidase U32 34271 5166085 Gura_0024 Geobacter uraniireducens Rf4 peptidase U32 YP_001228815.1 31893 R 351605 CDS YP_001228816.1 148262110 5166086 34313..34756 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase 34756 5166086 Gura_0025 Geobacter uraniireducens Rf4 histidine kinase YP_001228816.1 34313 D 351605 CDS YP_001228817.1 148262111 5166087 complement(34799..35287) 1 NC_009483.1 hypothetical protein 35287 5166087 Gura_0026 Geobacter uraniireducens Rf4 hypothetical protein YP_001228817.1 34799 R 351605 CDS YP_001228818.1 148262112 5163991 complement(35537..36556) 1 NC_009483.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 36556 5163991 Gura_0027 Geobacter uraniireducens Rf4 3-deoxy-7-phosphoheptulonate synthase YP_001228818.1 35537 R 351605 CDS YP_001228819.1 148262113 5163992 37020..37580 1 NC_009483.1 PFAM: protein of unknown function DUF882; Peptidase M15A; hypothetical protein 37580 5163992 Gura_0028 Geobacter uraniireducens Rf4 hypothetical protein YP_001228819.1 37020 D 351605 CDS YP_001228820.1 148262114 5163993 37784..38554 1 NC_009483.1 PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; OB-fold tRNA/helicase-type nucleic acid binding protein 38554 5163993 Gura_0029 Geobacter uraniireducens Rf4 OB-fold tRNA/helicase-type nucleic acid binding protein YP_001228820.1 37784 D 351605 CDS YP_001228821.1 148262115 5166428 38797..39258 1 NC_009483.1 hypothetical protein 39258 5166428 Gura_0030 Geobacter uraniireducens Rf4 hypothetical protein YP_001228821.1 38797 D 351605 CDS YP_001228822.1 148262116 5166429 39277..40569 1 NC_009483.1 PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein 40569 5166429 Gura_0031 Geobacter uraniireducens Rf4 peptidase M16 domain-containing protein YP_001228822.1 39277 D 351605 CDS YP_001228823.1 148262117 5166430 40640..41023 1 NC_009483.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; cobalamin (vitamin B12) biosynthesis CbiX protein 41023 5166430 Gura_0032 Geobacter uraniireducens Rf4 cobalamin (vitamin B12) biosynthesis CbiX protein YP_001228823.1 40640 D 351605 CDS YP_001228824.1 148262118 5166431 41023..41664 1 NC_009483.1 PFAM: Precorrin-8X methylmutase CbiC/CobH; precorrin-8X methylmutase CbiC/CobH 41664 5166431 Gura_0033 Geobacter uraniireducens Rf4 precorrin-8X methylmutase CbiC/CobH YP_001228824.1 41023 D 351605 CDS YP_001228825.1 148262119 5164756 41685..42794 1 NC_009483.1 TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; cobalamin biosynthesis protein CbiD 42794 5164756 Gura_0034 Geobacter uraniireducens Rf4 cobalamin biosynthesis protein CbiD YP_001228825.1 41685 D 351605 CDS YP_001228826.1 148262120 5164757 42881..44098 1 NC_009483.1 TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase subuit CbiE 44098 5164757 Gura_0035 Geobacter uraniireducens Rf4 precorrin-6y C5,15-methyltransferase subuit CbiE YP_001228826.1 42881 D 351605 CDS YP_001228827.1 148262121 5164758 44215..44949 1 NC_009483.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-2 C(20)-methyltransferase 44949 5164758 Gura_0036 Geobacter uraniireducens Rf4 precorrin-2 C(20)-methyltransferase YP_001228827.1 44215 D 351605 CDS YP_001228828.1 148262122 5164759 45042..45308 1 NC_009483.1 TIGRFAM: prevent-host-death family protein; prevent-host-death family protein 45308 5164759 Gura_0037 Geobacter uraniireducens Rf4 prevent-host-death family protein YP_001228828.1 45042 D 351605 CDS YP_001228829.1 148262123 5166744 45296..45736 1 NC_009483.1 PFAM: PilT protein domain protein; PilT domain-containing protein 45736 5166744 Gura_0038 Geobacter uraniireducens Rf4 PilT domain-containing protein YP_001228829.1 45296 D 351605 CDS YP_001228830.1 148262124 5166745 45854..46630 1 NC_009483.1 TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-4 C(11)-methyltransferase 46630 5166745 Gura_0039 Geobacter uraniireducens Rf4 precorrin-4 C(11)-methyltransferase YP_001228830.1 45854 D 351605 CDS YP_001228831.1 148262125 5166746 46804..47865 1 NC_009483.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; cobalamin (vitamin B12) biosynthesis protein CbiG 47865 5166746 Gura_0040 Geobacter uraniireducens Rf4 cobalamin (vitamin B12) biosynthesis protein CbiG YP_001228831.1 46804 D 351605 CDS YP_001228832.1 148262126 5166747 47902..50265 1 NC_009483.1 TIGRFAM: cobyric acid synthase CobQ; precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Cobyrinic acid a,c-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; cobyric acid synthase CobQ 50265 5166747 Gura_0041 Geobacter uraniireducens Rf4 cobyric acid synthase CobQ YP_001228832.1 47902 D 351605 CDS YP_001228833.1 148262127 5163635 50335..51321 1 NC_009483.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; cobalamin biosynthesis protein CobD 51321 5163635 Gura_0042 Geobacter uraniireducens Rf4 cobalamin biosynthesis protein CobD YP_001228833.1 50335 D 351605 CDS YP_001228834.1 148262128 5163636 51562..52635 1 NC_009483.1 TIGRFAM: putative L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase, class I and II; aminotransferase class-III; putative L-threonine-O-3-phosphate decarboxylase 52635 5163636 Gura_0043 Geobacter uraniireducens Rf4 putative L-threonine-O-3-phosphate decarboxylase YP_001228834.1 51562 D 351605 CDS YP_001228835.1 148262129 5163637 complement(52662..53492) 1 NC_009483.1 PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ 53492 5163637 Gura_0044 Geobacter uraniireducens Rf4 type IV pilus assembly PilZ YP_001228835.1 52662 R 351605 CDS YP_001228836.1 148262130 5163638 54023..54451 1 NC_009483.1 PFAM: ferric-uptake regulator; ferric uptake regulator family protein 54451 5163638 Gura_0045 Geobacter uraniireducens Rf4 ferric uptake regulator family protein YP_001228836.1 54023 D 351605 CDS YP_001228837.1 148262131 5164368 54448..55398 1 NC_009483.1 PFAM: periplasmic solute binding protein; periplasmic solute binding protein 55398 5164368 Gura_0046 Geobacter uraniireducens Rf4 periplasmic solute binding protein YP_001228837.1 54448 D 351605 CDS YP_001228838.1 148262132 5164369 55389..56141 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 56141 5164369 Gura_0047 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001228838.1 55389 D 351605 CDS YP_001228839.1 148262133 5164370 56242..57060 1 NC_009483.1 PFAM: ABC-3 protein; ABC-3 protein 57060 5164370 Gura_0048 Geobacter uraniireducens Rf4 ABC-3 protein YP_001228839.1 56242 D 351605 CDS YP_001228840.1 148262134 5164371 57308..57751 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 57751 5164371 Gura_0049 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001228840.1 57308 D 351605 CDS YP_001228841.1 148262135 5164897 57841..59163 1 NC_009483.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor 59163 5164897 Gura_0050 Geobacter uraniireducens Rf4 response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor YP_001228841.1 57841 D 351605 CDS YP_001228842.1 148262136 5164898 59228..61183 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 61183 5164898 Gura_0051 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001228842.1 59228 D 351605 CDS YP_001228843.1 148262137 5164899 61234..62064 1 NC_009483.1 PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein 62064 5164899 Gura_0052 Geobacter uraniireducens Rf4 extracellular solute-binding protein YP_001228843.1 61234 D 351605 CDS YP_001228844.1 148262138 5165019 62244..63578 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 63578 5165019 Gura_0053 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001228844.1 62244 D 351605 CDS YP_001228845.1 148262139 5165020 63613..65016 1 NC_009483.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor 65016 5165020 Gura_0054 Geobacter uraniireducens Rf4 response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor YP_001228845.1 63613 D 351605 CDS YP_001228846.1 148262140 5165021 65073..65603 1 NC_009483.1 PFAM: CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase 65603 5165021 Gura_0055 Geobacter uraniireducens Rf4 zinc-binding CMP/dCMP deaminase YP_001228846.1 65073 D 351605 CDS YP_001228847.1 148262141 5164256 66502..71754 1 NC_009483.1 hypothetical protein 71754 5164256 Gura_0056 Geobacter uraniireducens Rf4 hypothetical protein YP_001228847.1 66502 D 351605 CDS YP_001228848.1 148262142 5164257 71880..72314 1 NC_009483.1 hypothetical protein 72314 5164257 Gura_0057 Geobacter uraniireducens Rf4 hypothetical protein YP_001228848.1 71880 D 351605 CDS YP_001228849.1 148262143 5164258 72314..73312 1 NC_009483.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 73312 5164258 Gura_0058 Geobacter uraniireducens Rf4 integrase catalytic subunit YP_001228849.1 72314 D 351605 CDS YP_001228850.1 148262144 5164446 73425..74018 1 NC_009483.1 hypothetical protein 74018 5164446 Gura_0059 Geobacter uraniireducens Rf4 hypothetical protein YP_001228850.1 73425 D 351605 CDS YP_001228851.1 148262145 5164447 74015..74977 1 NC_009483.1 hypothetical protein 74977 5164447 Gura_0060 Geobacter uraniireducens Rf4 hypothetical protein YP_001228851.1 74015 D 351605 CDS YP_001228852.1 148262146 5164448 75182..75952 1 NC_009483.1 hypothetical protein 75952 5164448 Gura_0061 Geobacter uraniireducens Rf4 hypothetical protein YP_001228852.1 75182 D 351605 CDS YP_001228853.1 148262147 5164449 76021..76662 1 NC_009483.1 hypothetical protein 76662 5164449 Gura_0062 Geobacter uraniireducens Rf4 hypothetical protein YP_001228853.1 76021 D 351605 CDS YP_001228854.1 148262148 5164752 complement(76777..77028) 1 NC_009483.1 hypothetical protein 77028 5164752 Gura_0063 Geobacter uraniireducens Rf4 hypothetical protein YP_001228854.1 76777 R 351605 CDS YP_001228855.1 148262149 5164753 complement(77043..77855) 1 NC_009483.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; IstB ATP binding domain-containing protein 77855 5164753 Gura_0064 Geobacter uraniireducens Rf4 IstB ATP binding domain-containing protein YP_001228855.1 77043 R 351605 CDS YP_001228856.1 148262150 5164754 complement(77845..79293) 1 NC_009483.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 79293 5164754 Gura_0065 Geobacter uraniireducens Rf4 integrase catalytic subunit YP_001228856.1 77845 R 351605 CDS YP_001228857.1 148262151 5163317 80297..85384 1 NC_009483.1 PFAM: coagulation factor 5/8 type domain protein; Fibronectin, type III domain protein; fibronectin I domain-containing protein 85384 5163317 Gura_0068 Geobacter uraniireducens Rf4 fibronectin I domain-containing protein YP_001228857.1 80297 D 351605 CDS YP_001228858.1 148262152 5163318 85416..86372 1 NC_009483.1 hypothetical protein 86372 5163318 Gura_0069 Geobacter uraniireducens Rf4 hypothetical protein YP_001228858.1 85416 D 351605 CDS YP_001228859.1 148262153 5163319 86378..92233 1 NC_009483.1 PFAM: APHP domain protein; WD40 domain protein beta Propeller; APHP domain-containing protein 92233 5163319 Gura_0070 Geobacter uraniireducens Rf4 APHP domain-containing protein YP_001228859.1 86378 D 351605 CDS YP_001228860.1 148262154 5164038 92423..93313 1 NC_009483.1 catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 93313 prpB 5164038 prpB Geobacter uraniireducens Rf4 2-methylisocitrate lyase YP_001228860.1 92423 D 351605 CDS YP_001228861.1 148262155 5164039 93310..94428 1 NC_009483.1 TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; 2-methylcitrate synthase/citrate synthase II 94428 5164039 Gura_0072 Geobacter uraniireducens Rf4 2-methylcitrate synthase/citrate synthase II YP_001228861.1 93310 D 351605 CDS YP_001228862.1 148262156 5164040 94436..95881 1 NC_009483.1 functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; 2-methylcitrate dehydratase 95881 prpD 5164040 prpD Geobacter uraniireducens Rf4 2-methylcitrate dehydratase YP_001228862.1 94436 D 351605 CDS YP_001228863.1 148262157 5163021 complement(96022..96603) 1 NC_009483.1 PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 96603 5163021 Gura_0074 Geobacter uraniireducens Rf4 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_001228863.1 96022 R 351605 CDS YP_001228864.1 148262158 5163022 97075..103743 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 103743 5163022 Gura_0075 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001228864.1 97075 D 351605 CDS YP_001228865.1 148262159 5163023 103752..108068 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 108068 5163023 Gura_0076 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001228865.1 103752 D 351605 CDS YP_001228866.1 148262160 5163024 108130..115629 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 115629 5163024 Gura_0077 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001228866.1 108130 D 351605 CDS YP_001228867.1 148262161 5164966 complement(115981..116289) 1 NC_009483.1 hypothetical protein 116289 5164966 Gura_0078 Geobacter uraniireducens Rf4 hypothetical protein YP_001228867.1 115981 R 351605 CDS YP_001228868.1 148262162 5164967 116557..117519 1 NC_009483.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 117519 5164967 Gura_0079 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001228868.1 116557 D 351605 CDS YP_001228869.1 148262163 5164968 117731..118162 1 NC_009483.1 PFAM: Heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 118162 5164968 Gura_0080 Geobacter uraniireducens Rf4 heavy metal transport/detoxification protein YP_001228869.1 117731 D 351605 CDS YP_001228870.1 148262164 5164969 118220..118684 1 NC_009483.1 hypothetical protein 118684 5164969 Gura_0081 Geobacter uraniireducens Rf4 hypothetical protein YP_001228870.1 118220 D 351605 CDS YP_001228871.1 148262165 5164677 118684..119844 1 NC_009483.1 PFAM: protein of unknown function DUF214; hypothetical protein 119844 5164677 Gura_0082 Geobacter uraniireducens Rf4 hypothetical protein YP_001228871.1 118684 D 351605 CDS YP_001228872.1 148262166 5164678 119949..120635 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 120635 5164678 Gura_0083 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001228872.1 119949 D 351605 CDS YP_001228873.1 148262167 5164679 120705..121823 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 121823 5164679 Gura_0084 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001228873.1 120705 D 351605 CDS YP_001228874.1 148262168 5164680 121820..123178 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 123178 5164680 Gura_0085 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001228874.1 121820 D 351605 CDS YP_001228875.1 148262169 5163681 complement(123752..124279) 1 NC_009483.1 hypothetical protein 124279 5163681 Gura_0086 Geobacter uraniireducens Rf4 hypothetical protein YP_001228875.1 123752 R 351605 CDS YP_001228876.1 148262170 5163682 124889..126163 1 NC_009483.1 PFAM: outer membrane efflux protein; outer membrane efflux protein 126163 5163682 Gura_0087 Geobacter uraniireducens Rf4 outer membrane efflux protein YP_001228876.1 124889 D 351605 CDS YP_001228877.1 148262171 5163683 126274..127680 1 NC_009483.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 127680 5163683 Gura_0088 Geobacter uraniireducens Rf4 RND family efflux transporter MFP subunit YP_001228877.1 126274 D 351605 CDS YP_001228878.1 148262172 5163684 127924..131070 1 NC_009483.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux protein 131070 5163684 Gura_0089 Geobacter uraniireducens Rf4 CzcA family heavy metal efflux protein YP_001228878.1 127924 D 351605 CDS YP_001228879.1 148262173 5166911 131158..131634 1 NC_009483.1 hypothetical protein 131634 5166911 Gura_0090 Geobacter uraniireducens Rf4 hypothetical protein YP_001228879.1 131158 D 351605 CDS YP_001228880.1 148262174 5166912 131727..132635 1 NC_009483.1 hypothetical protein 132635 5166912 Gura_0091 Geobacter uraniireducens Rf4 hypothetical protein YP_001228880.1 131727 D 351605 CDS YP_001228881.1 148262175 5166913 132648..133082 1 NC_009483.1 hypothetical protein 133082 5166913 Gura_0092 Geobacter uraniireducens Rf4 hypothetical protein YP_001228881.1 132648 D 351605 CDS YP_001228882.1 148262176 5165679 133160..133672 1 NC_009483.1 hypothetical protein 133672 5165679 Gura_0093 Geobacter uraniireducens Rf4 hypothetical protein YP_001228882.1 133160 D 351605 CDS YP_001228883.1 148262177 5165680 134192..134974 1 NC_009483.1 PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 134974 5165680 Gura_0094 Geobacter uraniireducens Rf4 ECF subfamily RNA polymerase sigma-24 factor YP_001228883.1 134192 D 351605 CDS YP_001228884.1 148262178 5165681 135043..135960 1 NC_009483.1 PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 135960 5165681 Gura_0095 Geobacter uraniireducens Rf4 alpha/beta hydrolase fold protein YP_001228884.1 135043 D 351605 CDS YP_001228885.1 148262179 5165041 136135..136734 1 NC_009483.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone) 136734 5165041 Gura_0096 Geobacter uraniireducens Rf4 NAD(P)H dehydrogenase (quinone) YP_001228885.1 136135 D 351605 CDS YP_001228886.1 148262180 5165042 136843..137520 1 NC_009483.1 hypothetical protein 137520 5165042 Gura_0097 Geobacter uraniireducens Rf4 hypothetical protein YP_001228886.1 136843 D 351605 CDS YP_001228887.1 148262181 5165043 complement(137542..138237) 1 NC_009483.1 protein-disulfide isomerase-like protein 138237 5165043 Gura_0098 Geobacter uraniireducens Rf4 protein-disulfide isomerase-like protein YP_001228887.1 137542 R 351605 CDS YP_001228888.1 148262182 5166617 138711..139319 1 NC_009483.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 139319 5166617 Gura_0099 Geobacter uraniireducens Rf4 ECF subfamily RNA polymerase sigma-24 factor YP_001228888.1 138711 D 351605 CDS YP_001228889.1 148262183 5166618 139319..140434 1 NC_009483.1 putative transmembrane anti-sigma factor 140434 5166618 Gura_0100 Geobacter uraniireducens Rf4 putative transmembrane anti-sigma factor YP_001228889.1 139319 D 351605 CDS YP_001228890.1 148262184 5166619 140569..141348 1 NC_009483.1 hypothetical protein 141348 5166619 Gura_0101 Geobacter uraniireducens Rf4 hypothetical protein YP_001228890.1 140569 D 351605 CDS YP_001228891.1 148262185 5164766 141537..141914 1 NC_009483.1 hypothetical protein 141914 5164766 Gura_0102 Geobacter uraniireducens Rf4 hypothetical protein YP_001228891.1 141537 D 351605 CDS YP_001228892.1 148262186 5164767 141911..142402 1 NC_009483.1 hypothetical protein 142402 5164767 Gura_0103 Geobacter uraniireducens Rf4 hypothetical protein YP_001228892.1 141911 D 351605 CDS YP_001228893.1 148262187 5164768 142485..142940 1 NC_009483.1 PFAM: Ankyrin; ankyrin 142940 5164768 Gura_0104 Geobacter uraniireducens Rf4 ankyrin YP_001228893.1 142485 D 351605 CDS YP_001228894.1 148262188 5165165 143224..143916 1 NC_009483.1 PFAM: TPR repeat-containing protein; Sel1 domain protein repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 143916 5165165 Gura_0105 Geobacter uraniireducens Rf4 hypothetical protein YP_001228894.1 143224 D 351605 CDS YP_001228895.1 148262189 5165166 144043..145224 1 NC_009483.1 PFAM: transposase, mutator type; transposase, mutator type 145224 5165166 Gura_0106 Geobacter uraniireducens Rf4 transposase, mutator type YP_001228895.1 144043 D 351605 CDS YP_001228896.1 148262190 5165167 complement(145190..146431) 1 NC_009483.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 146431 5165167 Gura_0107 Geobacter uraniireducens Rf4 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001228896.1 145190 R 351605 CDS YP_001228897.1 148262191 5164806 146737..147951 1 NC_009483.1 PFAM: transposase, mutator type; transposase, mutator type 147951 5164806 Gura_0108 Geobacter uraniireducens Rf4 transposase, mutator type YP_001228897.1 146737 D 351605 CDS YP_001228898.1 148262192 5164807 complement(148033..148311) 1 NC_009483.1 hypothetical protein 148311 5164807 Gura_0109 Geobacter uraniireducens Rf4 hypothetical protein YP_001228898.1 148033 R 351605 CDS YP_001228899.1 148262193 5164808 complement(148427..149791) 1 NC_009483.1 hypothetical protein 149791 5164808 Gura_0110 Geobacter uraniireducens Rf4 hypothetical protein YP_001228899.1 148427 R 351605 CDS YP_001228900.1 148262194 5166971 complement(150012..153026) 1 NC_009483.1 PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase 153026 5166971 Gura_0111 Geobacter uraniireducens Rf4 Glu/Leu/Phe/Val dehydrogenase YP_001228900.1 150012 R 351605 CDS YP_001228901.1 148262195 5166972 complement(153044..154498) 1 NC_009483.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; succinate-semialdehyde dehydrogenase 154498 5166972 Gura_0112 Geobacter uraniireducens Rf4 succinate-semialdehyde dehydrogenase YP_001228901.1 153044 R 351605 CDS YP_001228902.1 148262196 5166973 complement(154603..155313) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 155313 5166973 Gura_0113 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001228902.1 154603 R 351605 CDS YP_001228903.1 148262197 5164483 complement(155310..156035) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 156035 5164483 Gura_0114 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001228903.1 155310 R 351605 CDS YP_001228904.1 148262198 5164484 complement(156038..157015) 1 NC_009483.1 PFAM: inner-membrane translocator; inner-membrane translocator 157015 5164484 Gura_0115 Geobacter uraniireducens Rf4 inner-membrane translocator YP_001228904.1 156038 R 351605 CDS YP_001228905.1 148262199 5164485 complement(157018..157902) 1 NC_009483.1 PFAM: inner-membrane translocator; inner-membrane translocator 157902 5164485 Gura_0116 Geobacter uraniireducens Rf4 inner-membrane translocator YP_001228905.1 157018 R 351605 CDS YP_001228906.1 148262200 5163756 complement(158018..159262) 1 NC_009483.1 PFAM: Extracellular ligand-binding receptor; extracellular ligand-binding receptor 159262 5163756 Gura_0117 Geobacter uraniireducens Rf4 extracellular ligand-binding receptor YP_001228906.1 158018 R 351605 CDS YP_001228907.1 148262201 5163757 complement(159658..161433) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; sigma-54 dependent trancsriptional regulator 161433 5163757 Gura_0118 Geobacter uraniireducens Rf4 sigma-54 dependent trancsriptional regulator YP_001228907.1 159658 R 351605 CDS YP_001228908.1 148262202 5162616 161855..163171 1 NC_009483.1 TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; 4-aminobutyrate aminotransferase 163171 5162616 Gura_0119 Geobacter uraniireducens Rf4 4-aminobutyrate aminotransferase YP_001228908.1 161855 D 351605 CDS YP_001228909.1 148262203 5162617 complement(163494..169574) 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 169574 5162617 Gura_0120 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001228909.1 163494 R 351605 CDS YP_001228910.1 148262204 5162618 complement(169899..171728) 1 NC_009483.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 171728 5162618 Gura_0121 Geobacter uraniireducens Rf4 glucosamine--fructose-6-phosphate aminotransferase YP_001228910.1 169899 R 351605 CDS YP_001228911.1 148262205 5166393 complement(171794..173167) 1 NC_009483.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 173167 glmU 5166393 glmU Geobacter uraniireducens Rf4 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_001228911.1 171794 R 351605 CDS YP_001228912.1 148262206 5166394 173374..173928 1 NC_009483.1 hypothetical protein 173928 5166394 Gura_0123 Geobacter uraniireducens Rf4 hypothetical protein YP_001228912.1 173374 D 351605 CDS YP_001228913.1 148262207 5166395 173965..175842 1 NC_009483.1 PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 175842 5166395 Gura_0124 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001228913.1 173965 D 351605 CDS YP_001228914.1 148262208 5162763 176170..178026 1 NC_009483.1 hypothetical protein 178026 5162763 Gura_0125 Geobacter uraniireducens Rf4 hypothetical protein YP_001228914.1 176170 D 351605 CDS YP_001228915.1 148262209 5162764 complement(178140..179504) 1 NC_009483.1 hypothetical protein 179504 5162764 Gura_0126 Geobacter uraniireducens Rf4 hypothetical protein YP_001228915.1 178140 R 351605 CDS YP_001228916.1 148262210 5162765 complement(179620..179790) 1 NC_009483.1 hypothetical protein 179790 5162765 Gura_0127 Geobacter uraniireducens Rf4 hypothetical protein YP_001228916.1 179620 R 351605 CDS YP_001228917.1 148262211 5165918 complement(180118..182460) 1 NC_009483.1 PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; GAF sensor signal transduction histidine kinase 182460 5165918 Gura_0128 Geobacter uraniireducens Rf4 GAF sensor signal transduction histidine kinase YP_001228917.1 180118 R 351605 CDS YP_001228918.1 148262212 5162781 complement(182520..182876) 1 NC_009483.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger, DksA/TraR C4-type; TraR/DksA family transcriptional regulator 182876 5162781 Gura_0129 Geobacter uraniireducens Rf4 TraR/DksA family transcriptional regulator YP_001228918.1 182520 R 351605 CDS YP_001228919.1 148262213 5162782 complement(182970..184331) 1 NC_009483.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 184331 5162782 Gura_0130 Geobacter uraniireducens Rf4 DNA repair protein RadA YP_001228919.1 182970 R 351605 CDS YP_001228920.1 148262214 5162783 184480..186123 1 NC_009483.1 PFAM: PBS lyase HEAT domain protein repeat-containing protein; HEAT repeat-containing PBS lyase 186123 5162783 Gura_0131 Geobacter uraniireducens Rf4 HEAT repeat-containing PBS lyase YP_001228920.1 184480 D 351605 CDS YP_001228921.1 148262215 5162903 186120..187493 1 NC_009483.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 187493 5162903 Gura_0132 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001228921.1 186120 D 351605 CDS YP_001228922.1 148262216 5162904 complement(187500..188093) 1 NC_009483.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; HEAT repeat-containing PBS lyase 188093 5162904 Gura_0133 Geobacter uraniireducens Rf4 HEAT repeat-containing PBS lyase YP_001228922.1 187500 R 351605 CDS YP_001228923.1 148262217 5162905 188155..188478 1 NC_009483.1 hypothetical protein 188478 5162905 Gura_0134 Geobacter uraniireducens Rf4 hypothetical protein YP_001228923.1 188155 D 351605 CDS YP_001228924.1 148262218 5163375 188642..189622 1 NC_009483.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 189622 5163375 Gura_0135 Geobacter uraniireducens Rf4 3-oxoacyl-(acyl-carrier-protein) synthase III YP_001228924.1 188642 D 351605 CDS YP_001228925.1 148262219 5163376 complement(189546..190673) 1 NC_009483.1 hypothetical protein 190673 5163376 Gura_0136 Geobacter uraniireducens Rf4 hypothetical protein YP_001228925.1 189546 R 351605 CDS YP_001228926.1 148262220 5163377 complement(190762..191088) 1 NC_009483.1 hypothetical protein 191088 5163377 Gura_0137 Geobacter uraniireducens Rf4 hypothetical protein YP_001228926.1 190762 R 351605 CDS YP_001228927.1 148262221 5167087 complement(191092..191301) 1 NC_009483.1 hypothetical protein 191301 5167087 Gura_0138 Geobacter uraniireducens Rf4 hypothetical protein YP_001228927.1 191092 R 351605 CDS YP_001228928.1 148262222 5167088 191373..192548 1 NC_009483.1 PFAM: transposase, IS4 family protein; transposase, IS4 family protein 192548 5167088 Gura_0139 Geobacter uraniireducens Rf4 transposase, IS4 family protein YP_001228928.1 191373 D 351605 CDS YP_001228929.1 148262223 5167089 192799..196278 1 NC_009483.1 TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; transcription-repair coupling factor 196278 5167089 Gura_0140 Geobacter uraniireducens Rf4 transcription-repair coupling factor YP_001228929.1 192799 D 351605 CDS YP_001228930.1 148262224 5165029 196333..197265 1 NC_009483.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 197265 5165029 Gura_0141 Geobacter uraniireducens Rf4 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001228930.1 196333 D 351605 CDS YP_001228931.1 148262225 5165030 197280..198317 1 NC_009483.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 198317 5165030 Gura_0142 Geobacter uraniireducens Rf4 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001228931.1 197280 D 351605 CDS YP_001228932.1 148262226 5165031 complement(198394..199287) 1 NC_009483.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; chaperone DnaJ domain-containing protein 199287 5165031 Gura_0143 Geobacter uraniireducens Rf4 chaperone DnaJ domain-containing protein YP_001228932.1 198394 R 351605 CDS YP_001228933.1 148262227 5163186 199443..200858 1 NC_009483.1 TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase; FAD dependent oxidoreductase; protoporphyrinogen oxidase 200858 5163186 Gura_0144 Geobacter uraniireducens Rf4 protoporphyrinogen oxidase YP_001228933.1 199443 D 351605 CDS YP_001228934.1 148262228 5163187 complement(200916..201758) 1 NC_009483.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding subunit 201758 5163187 Gura_0145 Geobacter uraniireducens Rf4 oxidoreductase FAD/NAD(P)-binding subunit YP_001228934.1 200916 R 351605 CDS YP_001228935.1 148262229 5165937 complement(201839..202843) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 202843 5165937 Gura_0146 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001228935.1 201839 R 351605 CDS YP_001228936.1 148262230 5165938 complement(203013..203960) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 203960 5165938 Gura_0147 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001228936.1 203013 R 351605 CDS YP_001228937.1 148262231 5165939 complement(204078..204563) 1 NC_009483.1 PFAM: methyl-viologen-reducing hydrogenase, delta subunit; methyl-viologen-reducing hydrogenase subunit delta 204563 5165939 Gura_0148 Geobacter uraniireducens Rf4 methyl-viologen-reducing hydrogenase subunit delta YP_001228937.1 204078 R 351605 CDS YP_001228938.1 148262232 5165067 complement(204697..206694) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 206694 5165067 Gura_0149 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001228938.1 204697 R 351605 CDS YP_001228939.1 148262233 5165068 complement(206845..207732) 1 NC_009483.1 PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; CoB--CoM heterodisulfide reductase 207732 5165068 Gura_0150 Geobacter uraniireducens Rf4 CoB--CoM heterodisulfide reductase YP_001228939.1 206845 R 351605 CDS YP_001228940.1 148262234 5165069 complement(207868..208446) 1 NC_009483.1 heterodisulfide reductase subunit C-like protein 208446 5165069 Gura_0151 Geobacter uraniireducens Rf4 heterodisulfide reductase subunit C-like protein YP_001228940.1 207868 R 351605 CDS YP_001228941.1 148262235 5166566 complement(208788..210923) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF162; protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 210923 5166566 Gura_0152 Geobacter uraniireducens Rf4 hypothetical protein YP_001228941.1 208788 R 351605 CDS YP_001228942.1 148262236 5166567 complement(210920..211474) 1 NC_009483.1 PFAM: protein of unknown function DUF162; hypothetical protein 211474 5166567 Gura_0153 Geobacter uraniireducens Rf4 hypothetical protein YP_001228942.1 210920 R 351605 CDS YP_001228943.1 148262237 5166568 211922..213871 1 NC_009483.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; L-lactate transport 213871 5166568 Gura_0154 Geobacter uraniireducens Rf4 L-lactate transport YP_001228943.1 211922 D 351605 CDS YP_001228944.1 148262238 5163367 214188..215354 1 NC_009483.1 TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; succinyl-CoA synthetase subunit beta 215354 5163367 Gura_0155 Geobacter uraniireducens Rf4 succinyl-CoA synthetase subunit beta YP_001228944.1 214188 D 351605 CDS YP_001228945.1 148262239 5163368 215367..216239 1 NC_009483.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit alpha 216239 5163368 Gura_0156 Geobacter uraniireducens Rf4 succinyl-CoA synthetase subunit alpha YP_001228945.1 215367 D 351605 CDS YP_001228946.1 148262240 5163369 216299..216475 1 NC_009483.1 hypothetical protein 216475 5163369 Gura_0157 Geobacter uraniireducens Rf4 hypothetical protein YP_001228946.1 216299 D 351605 CDS YP_001228947.1 148262241 5166735 216717..217436 1 NC_009483.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; GntR family transcriptional regulator 217436 5166735 Gura_0158 Geobacter uraniireducens Rf4 GntR family transcriptional regulator YP_001228947.1 216717 D 351605 CDS YP_001228948.1 148262242 5166736 217612..219237 1 NC_009483.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 219237 5166736 Gura_0159 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001228948.1 217612 D 351605 CDS YP_001228949.1 148262243 5166737 219238..221088 1 NC_009483.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 221088 5166737 Gura_0160 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001228949.1 219238 D 351605 CDS YP_001228950.1 148262244 5163218 221329..221607 1 NC_009483.1 hypothetical protein 221607 5163218 Gura_0161 Geobacter uraniireducens Rf4 hypothetical protein YP_001228950.1 221329 D 351605 CDS YP_001228951.1 148262245 5163219 221951..225001 1 NC_009483.1 hypothetical protein 225001 5163219 Gura_0162 Geobacter uraniireducens Rf4 hypothetical protein YP_001228951.1 221951 D 351605 CDS YP_001228952.1 148262246 5163220 225065..225661 1 NC_009483.1 hypothetical protein 225661 5163220 Gura_0163 Geobacter uraniireducens Rf4 hypothetical protein YP_001228952.1 225065 D 351605 CDS YP_001228953.1 148262247 5165432 225746..227656 1 NC_009483.1 TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; small GTP-binding protein domain; selenocysteine-specific translation elongation factor 227656 5165432 Gura_0164 Geobacter uraniireducens Rf4 selenocysteine-specific translation elongation factor YP_001228953.1 225746 D 351605 CDS YP_001228954.1 148262248 5165433 227809..229515 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 229515 5165433 Gura_0165 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001228954.1 227809 D 351605 CDS YP_001228955.1 148262249 5165434 229710..230123 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 230123 5165434 Gura_0166 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001228955.1 229710 D 351605 CDS YP_001228956.1 148262250 5165801 complement(230111..232084) 1 NC_009483.1 hypothetical protein 232084 5165801 Gura_0167 Geobacter uraniireducens Rf4 hypothetical protein YP_001228956.1 230111 R 351605 CDS YP_001228957.1 148262251 5165802 complement(232155..232826) 1 NC_009483.1 PFAM: isochorismatase hydrolase; isochorismatase hydrolase 232826 5165802 Gura_0168 Geobacter uraniireducens Rf4 isochorismatase hydrolase YP_001228957.1 232155 R 351605 CDS YP_001228958.1 148262252 5165803 complement(232962..233360) 1 NC_009483.1 PFAM: PilT protein domain protein; PilT domain-containing protein 233360 5165803 Gura_0169 Geobacter uraniireducens Rf4 PilT domain-containing protein YP_001228958.1 232962 R 351605 CDS YP_001228959.1 148262253 5165056 complement(233353..233670) 1 NC_009483.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; AbrB family transcriptional regulator 233670 5165056 Gura_0170 Geobacter uraniireducens Rf4 AbrB family transcriptional regulator YP_001228959.1 233353 R 351605 CDS YP_001228960.1 148262254 5165057 complement(233785..234603) 1 NC_009483.1 PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATPase 234603 5165057 Gura_0171 Geobacter uraniireducens Rf4 ATPase YP_001228960.1 233785 R 351605 CDS YP_001228961.1 148262255 5165058 complement(234804..234986) 1 NC_009483.1 hypothetical protein 234986 5165058 Gura_0172 Geobacter uraniireducens Rf4 hypothetical protein YP_001228961.1 234804 R 351605 CDS YP_001228962.1 148262256 5166416 complement(235035..235994) 1 NC_009483.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 235994 hemH 5166416 hemH Geobacter uraniireducens Rf4 ferrochelatase YP_001228962.1 235035 R 351605 CDS YP_001228963.1 148262257 5166417 236166..236879 1 NC_009483.1 PFAM: cyclase family protein; cyclase family protein 236879 5166417 Gura_0174 Geobacter uraniireducens Rf4 cyclase family protein YP_001228963.1 236166 D 351605 CDS YP_001228964.1 148262258 5166418 complement(236924..237814) 1 NC_009483.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 237814 5166418 Gura_0175 Geobacter uraniireducens Rf4 RluA family pseudouridine synthase YP_001228964.1 236924 R 351605 CDS YP_001228965.1 148262259 5164359 complement(237811..238332) 1 NC_009483.1 PFAM: NUDIX hydrolase; NUDIX hydrolase 238332 5164359 Gura_0176 Geobacter uraniireducens Rf4 NUDIX hydrolase YP_001228965.1 237811 R 351605 CDS YP_001228966.1 148262260 5164360 238494..238712 1 NC_009483.1 PFAM: protein of unknown function DUF1458; hypothetical protein 238712 5164360 Gura_0177 Geobacter uraniireducens Rf4 hypothetical protein YP_001228966.1 238494 D 351605 CDS YP_001228967.1 148262261 5164361 238749..239270 1 NC_009483.1 PFAM: peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 239270 5164361 Gura_0178 Geobacter uraniireducens Rf4 FKBP-type peptidylprolyl isomerase YP_001228967.1 238749 D 351605 CDS YP_001228968.1 148262262 5163562 complement(239361..239837) 1 NC_009483.1 PFAM: Rubrerythrin; rubrerythrin 239837 5163562 Gura_0179 Geobacter uraniireducens Rf4 rubrerythrin YP_001228968.1 239361 R 351605 CDS YP_001228969.1 148262263 5163563 240169..241158 1 NC_009483.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 241158 5163563 Gura_0180 Geobacter uraniireducens Rf4 alcohol dehydrogenase YP_001228969.1 240169 D 351605 CDS YP_001228970.1 148262264 5163335 241233..241901 1 NC_009483.1 hypothetical protein 241901 5163335 Gura_0181 Geobacter uraniireducens Rf4 hypothetical protein YP_001228970.1 241233 D 351605 CDS YP_001228971.1 148262265 5163336 241936..242418 1 NC_009483.1 PFAM: SEC-C motif domain protein; SecC motif-containing protein 242418 5163336 Gura_0182 Geobacter uraniireducens Rf4 SecC motif-containing protein YP_001228971.1 241936 D 351605 CDS YP_001228972.1 148262266 5163337 242924..244327 1 NC_009483.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 244327 5163337 Gura_0183 Geobacter uraniireducens Rf4 RNA-directed DNA polymerase YP_001228972.1 242924 D 351605 CDS YP_001228973.1 148262267 5162703 244487..245377 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 245377 5162703 Gura_0184 Geobacter uraniireducens Rf4 NAD-dependent epimerase/dehydratase YP_001228973.1 244487 D 351605 CDS YP_001228974.1 148262268 5162704 245649..247346 1 NC_009483.1 TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit, N terminal domain protein; ribonucleoside-diphosphate reductase 247346 5162704 Gura_0185 Geobacter uraniireducens Rf4 ribonucleoside-diphosphate reductase YP_001228974.1 245649 D 351605 CDS YP_001228975.1 148262269 5162705 247776..248738 1 NC_009483.1 hypothetical protein 248738 5162705 Gura_0186 Geobacter uraniireducens Rf4 hypothetical protein YP_001228975.1 247776 D 351605 CDS YP_001228976.1 148262270 5164729 248807..249748 1 NC_009483.1 PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; ATPase 249748 5164729 Gura_0187 Geobacter uraniireducens Rf4 ATPase YP_001228976.1 248807 D 351605 CDS YP_001228977.1 148262271 5164730 249745..250983 1 NC_009483.1 PFAM: protein of unknown function DUF58; hypothetical protein 250983 5164730 Gura_0188 Geobacter uraniireducens Rf4 hypothetical protein YP_001228977.1 249745 D 351605 CDS YP_001228978.1 148262272 5164731 250980..253271 1 NC_009483.1 PFAM: transglutaminase domain protein; transglutaminase domain-containing protein 253271 5164731 Gura_0189 Geobacter uraniireducens Rf4 transglutaminase domain-containing protein YP_001228978.1 250980 D 351605 CDS YP_001228979.1 148262273 5166007 253550..254416 1 NC_009483.1 TIGRFAM: MJ0042 family finger-like protein; Zinc finger-domain-containing protein 254416 5166007 Gura_0190 Geobacter uraniireducens Rf4 Zinc finger-domain-containing protein YP_001228979.1 253550 D 351605 CDS YP_001228980.1 148262274 5166008 complement(254568..256004) 1 NC_009483.1 PFAM: phospholipase D/Transphosphatidylase; phospholipase D/transphosphatidylase 256004 5166008 Gura_0191 Geobacter uraniireducens Rf4 phospholipase D/transphosphatidylase YP_001228980.1 254568 R 351605 CDS YP_001228981.1 148262275 5166009 complement(256100..256552) 1 NC_009483.1 hypothetical protein 256552 5166009 Gura_0192 Geobacter uraniireducens Rf4 hypothetical protein YP_001228981.1 256100 R 351605 CDS YP_001228982.1 148262276 5165217 257008..258354 1 NC_009483.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; sun protein 258354 5165217 Gura_0193 Geobacter uraniireducens Rf4 sun protein YP_001228982.1 257008 D 351605 CDS YP_001228983.1 148262277 5165218 258384..259049 1 NC_009483.1 PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 259049 5165218 Gura_0194 Geobacter uraniireducens Rf4 ribulose-phosphate 3-epimerase YP_001228983.1 258384 D 351605 CDS YP_001228984.1 148262278 5165219 259281..260210 1 NC_009483.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; response regulator receiver modulated diguanylate cyclase 260210 5165219 Gura_0195 Geobacter uraniireducens Rf4 response regulator receiver modulated diguanylate cyclase YP_001228984.1 259281 D 351605 CDS YP_001228985.1 148262279 5165189 complement(260193..260879) 1 NC_009483.1 PFAM: HhH-GPD family protein; HhH-GPD family protein 260879 5165189 Gura_0196 Geobacter uraniireducens Rf4 HhH-GPD family protein YP_001228985.1 260193 R 351605 CDS YP_001228986.1 148262280 5165190 complement(260864..261220) 1 NC_009483.1 hypothetical protein 261220 5165190 Gura_0197 Geobacter uraniireducens Rf4 hypothetical protein YP_001228986.1 260864 R 351605 CDS YP_001228987.1 148262281 5165191 complement(261236..261769) 1 NC_009483.1 carbonic anhydrase 261769 5165191 Gura_0198 Geobacter uraniireducens Rf4 carbonic anhydrase YP_001228987.1 261236 R 351605 CDS YP_001228988.1 148262282 5163277 complement(261833..262747) 1 NC_009483.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 262747 5163277 Gura_0199 Geobacter uraniireducens Rf4 quinolinate synthetase YP_001228988.1 261833 R 351605 CDS YP_001228989.1 148262283 5163278 262973..263239 1 NC_009483.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 263239 tatA 5163278 tatA Geobacter uraniireducens Rf4 twin arginine translocase protein A YP_001228989.1 262973 D 351605 CDS YP_001228990.1 148262284 5163279 complement(263294..264121) 1 NC_009483.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein 264121 5163279 Gura_0201 Geobacter uraniireducens Rf4 TPR repeat-containing protein YP_001228990.1 263294 R 351605 CDS YP_001228991.1 148262285 5163608 complement(264266..264850) 1 NC_009483.1 PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein 264850 5163608 Gura_0202 Geobacter uraniireducens Rf4 OmpA/MotB domain-containing protein YP_001228991.1 264266 R 351605 CDS YP_001228992.1 148262286 5163609 complement(264985..266268) 1 NC_009483.1 PFAM: WD40 domain protein beta Propeller; WD40 domain-containing protein 266268 5163609 Gura_0203 Geobacter uraniireducens Rf4 WD40 domain-containing protein YP_001228992.1 264985 R 351605 CDS YP_001228993.1 148262287 5163610 complement(266265..267002) 1 NC_009483.1 TIGRFAM: TonB family protein; TonB family protein 267002 5163610 Gura_0204 Geobacter uraniireducens Rf4 TonB family protein YP_001228993.1 266265 R 351605 CDS YP_001228994.1 148262288 5165156 complement(267041..267460) 1 NC_009483.1 PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 267460 5165156 Gura_0205 Geobacter uraniireducens Rf4 biopolymer transport protein ExbD/TolR YP_001228994.1 267041 R 351605 CDS YP_001228995.1 148262289 5165157 complement(267470..268144) 1 NC_009483.1 PFAM: MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 268144 5165157 Gura_0206 Geobacter uraniireducens Rf4 MotA/TolQ/ExbB proton channel YP_001228995.1 267470 R 351605 CDS YP_001228996.1 148262290 5165158 complement(268274..269053) 1 NC_009483.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 269053 5165158 Gura_0207 Geobacter uraniireducens Rf4 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001228996.1 268274 R 351605 CDS YP_001228997.1 148262291 5166690 269180..270325 1 NC_009483.1 TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; putative oxygen-independent coproporphyrinogen III oxidase 270325 5166690 Gura_0208 Geobacter uraniireducens Rf4 putative oxygen-independent coproporphyrinogen III oxidase YP_001228997.1 269180 D 351605 CDS YP_001228998.1 148262292 5166691 270445..271476 1 NC_009483.1 TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; heat-inducible transcription repressor HrcA 271476 5166691 Gura_0209 Geobacter uraniireducens Rf4 heat-inducible transcription repressor HrcA YP_001228998.1 270445 D 351605 CDS YP_001228999.1 148262293 5166692 271541..272140 1 NC_009483.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 272140 5166692 Gura_0210 Geobacter uraniireducens Rf4 heat shock protein GrpE YP_001228999.1 271541 D 351605 CDS YP_001229000.1 148262294 5162885 272329..274236 1 NC_009483.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 274236 dnaK 5162885 dnaK Geobacter uraniireducens Rf4 molecular chaperone DnaK YP_001229000.1 272329 D 351605 CDS YP_001229001.1 148262295 5162886 274376..275494 1 NC_009483.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 275494 5162886 Gura_0212 Geobacter uraniireducens Rf4 chaperone protein DnaJ YP_001229001.1 274376 D 351605 CDS YP_001229002.1 148262296 5162887 275491..276069 1 NC_009483.1 PFAM: phospholipase D/Transphosphatidylase; phospholipase D/transphosphatidylase 276069 5162887 Gura_0213 Geobacter uraniireducens Rf4 phospholipase D/transphosphatidylase YP_001229002.1 275491 D 351605 CDS YP_001229003.1 148262297 5162790 276246..276995 1 NC_009483.1 NCAIR mutase (PurE)-like protein 276995 5162790 Gura_0214 Geobacter uraniireducens Rf4 NCAIR mutase (PurE)-like protein YP_001229003.1 276246 D 351605 CDS YP_001229004.1 148262298 5162791 277074..278246 1 NC_009483.1 PFAM: protein of unknown function DUF111; hypothetical protein 278246 5162791 Gura_0215 Geobacter uraniireducens Rf4 hypothetical protein YP_001229004.1 277074 D 351605 CDS YP_001229005.1 148262299 5164211 278243..278692 1 NC_009483.1 PFAM: phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A 278692 5164211 Gura_0216 Geobacter uraniireducens Rf4 phosphatidylglycerophosphatase A YP_001229005.1 278243 D 351605 CDS YP_001229006.1 148262300 5164212 278689..279951 1 NC_009483.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; competence/damage-inducible protein CinA 279951 5164212 Gura_0217 Geobacter uraniireducens Rf4 competence/damage-inducible protein CinA YP_001229006.1 278689 D 351605 CDS YP_001229007.1 148262301 5164213 279986..282073 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 282073 5164213 Gura_0218 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001229007.1 279986 D 351605 CDS YP_001229008.1 148262302 5164387 282254..283255 1 NC_009483.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 283255 recA 5164387 recA Geobacter uraniireducens Rf4 recombinase A YP_001229008.1 282254 D 351605 CDS YP_001229009.1 148262303 5164388 283260..284411 1 NC_009483.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; twitching motility protein 284411 5164388 Gura_0220 Geobacter uraniireducens Rf4 twitching motility protein YP_001229009.1 283260 D 351605 CDS YP_001229010.1 148262304 5164389 284413..284871 1 NC_009483.1 PFAM: regulatory protein RecX; regulatory protein RecX 284871 5164389 Gura_0221 Geobacter uraniireducens Rf4 regulatory protein RecX YP_001229010.1 284413 D 351605 CDS YP_001229011.1 148262305 5164193 285046..287676 1 NC_009483.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 287676 alaS 5164193 alaS Geobacter uraniireducens Rf4 alanyl-tRNA synthetase YP_001229011.1 285046 D 351605 CDS YP_001229012.1 148262306 5164194 287688..288032 1 NC_009483.1 PFAM: Cupin 2, conserved barrel domain protein; cupin 288032 5164194 Gura_0223 Geobacter uraniireducens Rf4 cupin YP_001229012.1 287688 D 351605 CDS YP_001229013.1 148262307 5164195 288058..289197 1 NC_009483.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; response regulator receiver sensor signal transduction histidine kinase 289197 5164195 Gura_0224 Geobacter uraniireducens Rf4 response regulator receiver sensor signal transduction histidine kinase YP_001229013.1 288058 D 351605 CDS YP_001229014.1 148262308 5165004 289511..290389 1 NC_009483.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 290389 5165004 Gura_0225 Geobacter uraniireducens Rf4 acetylglutamate kinase YP_001229014.1 289511 D 351605 CDS YP_001229015.1 148262309 5165005 290456..291646 1 NC_009483.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 291646 5165005 Gura_0226 Geobacter uraniireducens Rf4 acetylornithine aminotransferase YP_001229015.1 290456 D 351605 CDS YP_001229016.1 148262310 5165006 291701..292618 1 NC_009483.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 292618 5165006 Gura_0227 Geobacter uraniireducens Rf4 ornithine carbamoyltransferase YP_001229016.1 291701 D 351605 CDS YP_001229017.1 148262311 5163805 292767..293987 1 NC_009483.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 293987 5163805 Gura_0228 Geobacter uraniireducens Rf4 argininosuccinate synthase YP_001229017.1 292767 D 351605 CDS YP_001229018.1 148262312 5163806 294059..294520 1 NC_009483.1 PFAM: NUDIX hydrolase; NUDIX hydrolase 294520 5163806 Gura_0229 Geobacter uraniireducens Rf4 NUDIX hydrolase YP_001229018.1 294059 D 351605 CDS YP_001229019.1 148262313 5163807 294581..295771 1 NC_009483.1 hypothetical protein 295771 5163807 Gura_0230 Geobacter uraniireducens Rf4 hypothetical protein YP_001229019.1 294581 D 351605 CDS YP_001229020.1 148262314 5166052 295857..297233 1 NC_009483.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 297233 5166052 Gura_0231 Geobacter uraniireducens Rf4 argininosuccinate lyase YP_001229020.1 295857 D 351605 CDS YP_001229021.1 148262315 5166053 297334..298107 1 NC_009483.1 PFAM: Fibronectin, type III domain protein; fibronectin I domain-containing protein 298107 5166053 Gura_0232 Geobacter uraniireducens Rf4 fibronectin I domain-containing protein YP_001229021.1 297334 D 351605 CDS YP_001229022.1 148262316 5166054 298305..299558 1 NC_009483.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase 299558 5166054 Gura_0233 Geobacter uraniireducens Rf4 diaminopimelate decarboxylase YP_001229022.1 298305 D 351605 CDS YP_001229023.1 148262317 5164772 299631..300503 1 NC_009483.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 300503 5164772 Gura_0234 Geobacter uraniireducens Rf4 dihydrodipicolinate synthase YP_001229023.1 299631 D 351605 CDS YP_001229024.1 148262318 5164773 300687..301490 1 NC_009483.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 301490 5164773 Gura_0235 Geobacter uraniireducens Rf4 dihydrodipicolinate reductase YP_001229024.1 300687 D 351605 CDS YP_001229025.1 148262319 5164774 301511..301822 1 NC_009483.1 PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 301822 5164774 Gura_0236 Geobacter uraniireducens Rf4 DNA polymerase subunit beta YP_001229025.1 301511 D 351605 CDS YP_001229026.1 148262320 5163688 301815..302210 1 NC_009483.1 PFAM: HEPN domain protein; HEPN domain-containing protein 302210 5163688 Gura_0237 Geobacter uraniireducens Rf4 HEPN domain-containing protein YP_001229026.1 301815 D 351605 CDS YP_001229027.1 148262321 5163689 302239..303471 1 NC_009483.1 catalyzes the interconversion of tetrahydrodipicolinate and L,L-diaminopimelate in lysine biosynthesis; L,L-diaminopimelate aminotransferase 303471 5163689 Gura_0238 Geobacter uraniireducens Rf4 L,L-diaminopimelate aminotransferase YP_001229027.1 302239 D 351605 CDS YP_001229028.1 148262322 5163690 303582..303842 1 NC_009483.1 hypothetical protein 303842 5163690 Gura_0239 Geobacter uraniireducens Rf4 hypothetical protein YP_001229028.1 303582 D 351605 CDS YP_001229029.1 148262323 5166112 303852..304136 1 NC_009483.1 hypothetical protein 304136 5166112 Gura_0240 Geobacter uraniireducens Rf4 hypothetical protein YP_001229029.1 303852 D 351605 CDS YP_001229030.1 148262324 5166113 304309..304608 1 NC_009483.1 PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 304608 5166113 Gura_0241 Geobacter uraniireducens Rf4 DNA polymerase subunit beta YP_001229030.1 304309 D 351605 CDS YP_001229031.1 148262325 5166114 304805..305407 1 NC_009483.1 hypothetical protein 305407 5166114 Gura_0242 Geobacter uraniireducens Rf4 hypothetical protein YP_001229031.1 304805 D 351605 CDS YP_001229032.1 148262326 5164833 305400..306557 1 NC_009483.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal-dependent phosphohydrolase 306557 5164833 Gura_0243 Geobacter uraniireducens Rf4 metal-dependent phosphohydrolase YP_001229032.1 305400 D 351605 CDS YP_001229033.1 148262327 5164834 306760..307974 1 NC_009483.1 PFAM: transposase, mutator type; transposase, mutator type 307974 5164834 Gura_0244 Geobacter uraniireducens Rf4 transposase, mutator type YP_001229033.1 306760 D 351605 CDS YP_001229034.1 148262328 5164835 complement(308233..309408) 1 NC_009483.1 PFAM: transposase, IS4 family protein; transposase, IS4 family protein 309408 5164835 Gura_0245 Geobacter uraniireducens Rf4 transposase, IS4 family protein YP_001229034.1 308233 R 351605 CDS YP_001229035.1 148262329 5163564 309609..310118 1 NC_009483.1 PFAM: protein of unknown function UPF0153; hypothetical protein 310118 5163564 Gura_0246 Geobacter uraniireducens Rf4 hypothetical protein YP_001229035.1 309609 D 351605 CDS YP_001229036.1 148262330 5163565 310246..310443 1 NC_009483.1 hypothetical protein 310443 5163565 Gura_0247 Geobacter uraniireducens Rf4 hypothetical protein YP_001229036.1 310246 D 351605 CDS YP_001229037.1 148262331 5163566 310526..310786 1 NC_009483.1 hypothetical protein 310786 5163566 Gura_0248 Geobacter uraniireducens Rf4 hypothetical protein YP_001229037.1 310526 D 351605 CDS YP_001229038.1 148262332 5166221 complement(310892..312091) 1 NC_009483.1 PFAM: major facilitator superfamily MFS_1; major facilitator transporter 312091 5166221 Gura_0249 Geobacter uraniireducens Rf4 major facilitator transporter YP_001229038.1 310892 R 351605 CDS YP_001229039.1 148262333 5166222 312256..312774 1 NC_009483.1 PFAM: protein of unknown function DUF45; hypothetical protein 312774 5166222 Gura_0250 Geobacter uraniireducens Rf4 hypothetical protein YP_001229039.1 312256 D 351605 CDS YP_001229040.1 148262334 5164229 312820..313587 1 NC_009483.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 313587 5164229 Gura_0251 Geobacter uraniireducens Rf4 short-chain dehydrogenase/reductase SDR YP_001229040.1 312820 D 351605 CDS YP_001229041.1 148262335 5164230 314214..315617 1 NC_009483.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 315617 5164230 Gura_0252 Geobacter uraniireducens Rf4 RNA-directed DNA polymerase YP_001229041.1 314214 D 351605 CDS YP_001229042.1 148262336 5164231 315934..316149 1 NC_009483.1 hypothetical protein 316149 5164231 Gura_0253 Geobacter uraniireducens Rf4 hypothetical protein YP_001229042.1 315934 D 351605 CDS YP_001229043.1 148262337 5164611 complement(316283..316564) 1 NC_009483.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 316564 5164611 Gura_0254 Geobacter uraniireducens Rf4 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001229043.1 316283 R 351605 CDS YP_001229044.1 148262338 5164612 complement(316697..317167) 1 NC_009483.1 hypothetical protein 317167 5164612 Gura_0255 Geobacter uraniireducens Rf4 hypothetical protein YP_001229044.1 316697 R 351605 CDS YP_001229045.1 148262339 5164613 complement(317415..318689) 1 NC_009483.1 PFAM: major facilitator superfamily MFS_1; major facilitator transporter 318689 5164613 Gura_0256 Geobacter uraniireducens Rf4 major facilitator transporter YP_001229045.1 317415 R 351605 CDS YP_001229046.1 148262340 5166399 318864..319745 1 NC_009483.1 PFAM: pseudouridine synthase; pseudouridine synthase 319745 5166399 Gura_0257 Geobacter uraniireducens Rf4 pseudouridine synthase YP_001229046.1 318864 D 351605 CDS YP_001229047.1 148262341 5166400 319942..320367 1 NC_009483.1 hypothetical protein 320367 5166400 Gura_0258 Geobacter uraniireducens Rf4 hypothetical protein YP_001229047.1 319942 D 351605 CDS YP_001229048.1 148262342 5166401 320455..320763 1 NC_009483.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 320763 5166401 Gura_0259 Geobacter uraniireducens Rf4 XRE family transcriptional regulator YP_001229048.1 320455 D 351605 CDS YP_001229049.1 148262343 5162697 complement(321169..321657) 1 NC_009483.1 PFAM: thioesterase superfamily protein; thioesterase superfamily protein 321657 5162697 Gura_0260 Geobacter uraniireducens Rf4 thioesterase superfamily protein YP_001229049.1 321169 R 351605 CDS YP_001229050.1 148262344 5162698 complement(322274..322978) 1 NC_009483.1 PFAM: Endonuclease V; deoxyribonuclease V 322978 5162698 Gura_0261 Geobacter uraniireducens Rf4 deoxyribonuclease V YP_001229050.1 322274 R 351605 CDS YP_001229051.1 148262345 5162699 323548..323763 1 NC_009483.1 PFAM: protein of unknown function DUF1653; hypothetical protein 323763 5162699 Gura_0262 Geobacter uraniireducens Rf4 hypothetical protein YP_001229051.1 323548 D 351605 CDS YP_001229052.1 148262346 5166049 complement(323849..324469) 1 NC_009483.1 PFAM: protein of unknown function UPF0126; hypothetical protein 324469 5166049 Gura_0263 Geobacter uraniireducens Rf4 hypothetical protein YP_001229052.1 323849 R 351605 CDS YP_001229053.1 148262347 5166050 complement(324641..325297) 1 NC_009483.1 hypothetical protein 325297 5166050 Gura_0264 Geobacter uraniireducens Rf4 hypothetical protein YP_001229053.1 324641 R 351605 CDS YP_001229054.1 148262348 5166051 complement(325479..326765) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: CHASE4 domain protein; PAS fold-4 domain protein; PAS fold domain protein; putative PAS/PAC sensor protein 326765 5166051 Gura_0265 Geobacter uraniireducens Rf4 putative PAS/PAC sensor protein YP_001229054.1 325479 R 351605 CDS YP_001229055.1 148262349 5166838 complement(326885..327805) 1 NC_009483.1 PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 327805 5166838 Gura_0266 Geobacter uraniireducens Rf4 beta-lactamase domain-containing protein YP_001229055.1 326885 R 351605 CDS YP_001229056.1 148262350 5166839 327983..328444 1 NC_009483.1 PFAM: PEBP family protein; PEBP family protein 328444 5166839 Gura_0267 Geobacter uraniireducens Rf4 PEBP family protein YP_001229056.1 327983 D 351605 CDS YP_001229057.1 148262351 5166840 328619..329605 1 NC_009483.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 329605 5166840 Gura_0268 Geobacter uraniireducens Rf4 serine/threonine protein kinase YP_001229057.1 328619 D 351605 CDS YP_001229058.1 148262352 5163200 329821..332478 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 332478 5163200 Gura_0269 Geobacter uraniireducens Rf4 multi-sensor hybrid histidine kinase YP_001229058.1 329821 D 351605 CDS YP_001229059.1 148262353 5163201 332823..334076 1 NC_009483.1 hypothetical protein 334076 5163201 Gura_0270 Geobacter uraniireducens Rf4 hypothetical protein YP_001229059.1 332823 D 351605 CDS YP_001229060.1 148262354 5163202 334206..335462 1 NC_009483.1 PFAM: major facilitator superfamily MFS_1; major facilitator transporter 335462 5163202 Gura_0271 Geobacter uraniireducens Rf4 major facilitator transporter YP_001229060.1 334206 D 351605 CDS YP_001229061.1 148262355 5162939 complement(335543..335767) 1 NC_009483.1 hypothetical protein 335767 5162939 Gura_0272 Geobacter uraniireducens Rf4 hypothetical protein YP_001229061.1 335543 R 351605 CDS YP_001229062.1 148262356 5162940 complement(335771..336772) 1 NC_009483.1 PFAM: dihydrouridine synthase, DuS; dihydrouridine synthase, DuS 336772 5162940 Gura_0273 Geobacter uraniireducens Rf4 dihydrouridine synthase, DuS YP_001229062.1 335771 R 351605 CDS YP_001229063.1 148262357 5162941 complement(336936..337442) 1 NC_009483.1 PFAM: peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 337442 5162941 Gura_0274 Geobacter uraniireducens Rf4 FKBP-type peptidylprolyl isomerase YP_001229063.1 336936 R 351605 CDS YP_001229064.1 148262358 5165700 complement(337714..338139) 1 NC_009483.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 338139 5165700 Gura_0275 Geobacter uraniireducens Rf4 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001229064.1 337714 R 351605 CDS YP_001229065.1 148262359 5165701 complement(338347..339222) 1 NC_009483.1 PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 339222 5165701 Gura_0276 Geobacter uraniireducens Rf4 helix-turn-helix domain-containing protein YP_001229065.1 338347 R 351605 CDS YP_001229066.1 148262360 5165702 339489..340148 1 NC_009483.1 PFAM: protein of unknown function DUF480; hypothetical protein 340148 5165702 Gura_0277 Geobacter uraniireducens Rf4 hypothetical protein YP_001229066.1 339489 D 351605 CDS YP_001229067.1 148262361 5164777 340360..341580 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase 341580 5164777 Gura_0278 Geobacter uraniireducens Rf4 histidine kinase YP_001229067.1 340360 D 351605 CDS YP_001229068.1 148262362 5164778 341624..342214 1 NC_009483.1 PFAM: NUDIX hydrolase; NUDIX hydrolase 342214 5164778 Gura_0279 Geobacter uraniireducens Rf4 NUDIX hydrolase YP_001229068.1 341624 D 351605 CDS YP_001229069.1 148262363 5164779 342343..342684 1 NC_009483.1 hypothetical protein 342684 5164779 Gura_0280 Geobacter uraniireducens Rf4 hypothetical protein YP_001229069.1 342343 D 351605 CDS YP_001229070.1 148262364 5163307 342665..343519 1 NC_009483.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; HDOD; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 343519 5163307 Gura_0281 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001229070.1 342665 D 351605 CDS YP_001229071.1 148262365 5163308 343509..344429 1 NC_009483.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver modulated diguanylate cyclase 344429 5163308 Gura_0282 Geobacter uraniireducens Rf4 response regulator receiver modulated diguanylate cyclase YP_001229071.1 343509 D 351605 CDS YP_001229072.1 148262366 5163309 344512..344814 1 NC_009483.1 hypothetical protein 344814 5163309 Gura_0283 Geobacter uraniireducens Rf4 hypothetical protein YP_001229072.1 344512 D 351605 CDS YP_001229073.1 148262367 5165059 344828..345559 1 NC_009483.1 hypothetical protein 345559 5165059 Gura_0284 Geobacter uraniireducens Rf4 hypothetical protein YP_001229073.1 344828 D 351605 CDS YP_001229074.1 148262368 5165060 complement(345574..346122) 1 NC_009483.1 TIGRFAM: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase; 2'-5' RNA ligase 346122 5165060 Gura_0285 Geobacter uraniireducens Rf4 2'-5' RNA ligase YP_001229074.1 345574 R 351605 CDS YP_001229075.1 148262369 5166480 complement(346133..347179) 1 NC_009483.1 poly-gamma-glutamate biosynthesis protein 347179 5166480 Gura_0286 Geobacter uraniireducens Rf4 poly-gamma-glutamate biosynthesis protein YP_001229075.1 346133 R 351605 CDS YP_001229076.1 148262370 5166481 347287..348555 1 NC_009483.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 348555 5166481 Gura_0287 Geobacter uraniireducens Rf4 seryl-tRNA synthetase YP_001229076.1 347287 D 351605 CDS YP_001229077.1 148262371 5164540 348877..349350 1 NC_009483.1 hypothetical protein 349350 5164540 Gura_0288 Geobacter uraniireducens Rf4 hypothetical protein YP_001229077.1 348877 D 351605 CDS YP_001229078.1 148262372 5163384 complement(349797..349988) 1 NC_009483.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 349988 tatA 5163384 tatA Geobacter uraniireducens Rf4 twin arginine translocase protein A YP_001229078.1 349797 R 351605 CDS YP_001229079.1 148262373 5164044 350304..350759 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 350759 5164044 Gura_0290 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001229079.1 350304 D 351605 CDS YP_001229080.1 148262374 5164045 350843..352837 1 NC_009483.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 352837 5164045 Gura_0291 Geobacter uraniireducens Rf4 excinuclease ABC subunit B YP_001229080.1 350843 D 351605 CDS YP_001229081.1 148262375 5165757 complement(352859..354223) 1 NC_009483.1 TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase 354223 5165757 Gura_0292 Geobacter uraniireducens Rf4 poly(A) polymerase YP_001229081.1 352859 R 351605 CDS YP_001229082.1 148262376 5165758 354339..354698 1 NC_009483.1 hypothetical protein 354698 5165758 Gura_0293 Geobacter uraniireducens Rf4 hypothetical protein YP_001229082.1 354339 D 351605 CDS YP_001229083.1 148262377 5165759 354770..355495 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 355495 5165759 Gura_0294 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001229083.1 354770 D 351605 CDS YP_001229084.1 148262378 5164591 355627..356226 1 NC_009483.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase 356226 5164591 Gura_0295 Geobacter uraniireducens Rf4 alkyl hydroperoxide reductase YP_001229084.1 355627 D 351605 CDS YP_001229085.1 148262379 5164592 356302..358533 1 NC_009483.1 PFAM: DNA polymerase B, exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; DNA polymerase B region 358533 5164592 Gura_0296 Geobacter uraniireducens Rf4 DNA polymerase B region YP_001229085.1 356302 D 351605 CDS YP_001229086.1 148262380 5164593 358623..359033 1 NC_009483.1 hypothetical protein 359033 5164593 Gura_0297 Geobacter uraniireducens Rf4 hypothetical protein YP_001229086.1 358623 D 351605 CDS YP_001229087.1 148262381 5166325 359035..359415 1 NC_009483.1 hypothetical protein 359415 5166325 Gura_0298 Geobacter uraniireducens Rf4 hypothetical protein YP_001229087.1 359035 D 351605 CDS YP_001229088.1 148262382 5166326 complement(359528..359767) 1 NC_009483.1 hypothetical protein 359767 5166326 Gura_0299 Geobacter uraniireducens Rf4 hypothetical protein YP_001229088.1 359528 R 351605 CDS YP_001229089.1 148262383 5166327 360110..362638 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 362638 5166327 Gura_0300 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001229089.1 360110 D 351605 CDS YP_001229090.1 148262384 5165970 362694..364205 1 NC_009483.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; ribonuclease 364205 5165970 Gura_0301 Geobacter uraniireducens Rf4 ribonuclease YP_001229090.1 362694 D 351605 CDS YP_001229091.1 148262385 5165971 364362..365540 1 NC_009483.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 365540 purT 5165971 purT Geobacter uraniireducens Rf4 phosphoribosylglycinamide formyltransferase 2 YP_001229091.1 364362 D 351605 CDS YP_001229092.1 148262386 5165972 365565..365867 1 NC_009483.1 PFAM: Rieske [2Fe-2S] domain protein; Rieske (2Fe-2S) domain-containing protein 365867 5165972 Gura_0303 Geobacter uraniireducens Rf4 Rieske (2Fe-2S) domain-containing protein YP_001229092.1 365565 D 351605 CDS YP_001229093.1 148262387 5164315 365958..366266 1 NC_009483.1 PFAM: ribosomal protein L21; 50S ribosomal protein L21 366266 rplU 5164315 rplU Geobacter uraniireducens Rf4 50S ribosomal protein L21 YP_001229093.1 365958 D 351605 CDS YP_001229094.1 148262388 5164316 366353..366610 1 NC_009483.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 366610 rpmA 5164316 rpmA Geobacter uraniireducens Rf4 50S ribosomal protein L27 YP_001229094.1 366353 D 351605 CDS YP_001229095.1 148262389 5164317 366690..367706 1 NC_009483.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 367706 obgE 5164317 obgE Geobacter uraniireducens Rf4 GTPase ObgE YP_001229095.1 366690 D 351605 CDS YP_001229096.1 148262390 5164989 complement(367816..371634) 1 NC_009483.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Ig family protein; peptidase S8/S53 subtilisin kexin sedolisin 371634 5164989 Gura_0307 Geobacter uraniireducens Rf4 peptidase S8/S53 subtilisin kexin sedolisin YP_001229096.1 367816 R 351605 CDS YP_001229097.1 148262391 5164990 complement(371853..372284) 1 NC_009483.1 PFAM: PilT protein domain protein; SMART: Nucleotide binding protein, PINc; PilT domain-containing protein 372284 5164990 Gura_0308 Geobacter uraniireducens Rf4 PilT domain-containing protein YP_001229097.1 371853 R 351605 CDS YP_001229098.1 148262392 5164991 complement(372260..372499) 1 NC_009483.1 hypothetical protein 372499 5164991 Gura_0309 Geobacter uraniireducens Rf4 hypothetical protein YP_001229098.1 372260 R 351605 CDS YP_001229099.1 148262393 5164145 complement(372624..373025) 1 NC_009483.1 hypothetical protein 373025 5164145 Gura_0310 Geobacter uraniireducens Rf4 hypothetical protein YP_001229099.1 372624 R 351605 CDS YP_001229100.1 148262394 5164146 373154..373408 1 NC_009483.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein 373408 5164146 Gura_0311 Geobacter uraniireducens Rf4 prevent-host-death family protein YP_001229100.1 373154 D 351605 CDS YP_001229101.1 148262395 5164147 373405..373659 1 NC_009483.1 TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin, Txe/YoeB; addiction module antitoxin 373659 5164147 Gura_0312 Geobacter uraniireducens Rf4 addiction module antitoxin YP_001229101.1 373405 D 351605 CDS YP_001229102.1 148262396 5164023 complement(373808..375217) 1 NC_009483.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N 375217 5164023 Gura_0313 Geobacter uraniireducens Rf4 proton-translocating NADH-quinone oxidoreductase subunit N YP_001229102.1 373808 R 351605 CDS YP_001229103.1 148262397 5164024 complement(375468..376949) 1 NC_009483.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 376949 5164024 Gura_0314 Geobacter uraniireducens Rf4 proton-translocating NADH-quinone oxidoreductase subunit M YP_001229103.1 375468 R 351605 CDS YP_001229104.1 148262398 5164025 complement(377033..377626) 1 NC_009483.1 hypothetical protein 377626 5164025 Gura_0315 Geobacter uraniireducens Rf4 hypothetical protein YP_001229104.1 377033 R 351605 CDS YP_001229105.1 148262399 5163247 complement(377742..378122) 1 NC_009483.1 hypothetical protein 378122 5163247 Gura_0316 Geobacter uraniireducens Rf4 hypothetical protein YP_001229105.1 377742 R 351605 CDS YP_001229106.1 148262400 5163248 378414..378947 1 NC_009483.1 hypothetical protein 378947 5163248 Gura_0317 Geobacter uraniireducens Rf4 hypothetical protein YP_001229106.1 378414 D 351605 CDS YP_001229107.1 148262401 5163249 378944..379969 1 NC_009483.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 379969 5163249 Gura_0318 Geobacter uraniireducens Rf4 integrase catalytic subunit YP_001229107.1 378944 D 351605 CDS YP_001229108.1 148262402 5166962 380169..381410 1 NC_009483.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 381410 5166962 Gura_0319 Geobacter uraniireducens Rf4 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001229108.1 380169 D 351605 CDS YP_001229109.1 148262403 5166963 complement(382413..384413) 1 NC_009483.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L 384413 5166963 Gura_0320 Geobacter uraniireducens Rf4 proton-translocating NADH-quinone oxidoreductase subunit L YP_001229109.1 382413 R 351605 CDS YP_001229110.1 148262404 5166964 complement(384563..384871) 1 NC_009483.1 PFAM: NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase subunit 4L 384871 5166964 Gura_0321 Geobacter uraniireducens Rf4 NADH-ubiquinone oxidoreductase subunit 4L YP_001229110.1 384563 R 351605 CDS YP_001229111.1 148262405 5162712 complement(385212..385697) 1 NC_009483.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 385697 5162712 Gura_0322 Geobacter uraniireducens Rf4 NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 YP_001229111.1 385212 R 351605 CDS YP_001229112.1 148262406 5162713 complement(385785..386315) 1 NC_009483.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 386315 5162713 Gura_0323 Geobacter uraniireducens Rf4 NADH dehydrogenase subunit I YP_001229112.1 385785 R 351605 CDS YP_001229113.1 148262407 5162714 complement(386355..386783) 1 NC_009483.1 ankyrin repeat-containing protein 386783 5162714 Gura_0324 Geobacter uraniireducens Rf4 ankyrin repeat-containing protein YP_001229113.1 386355 R 351605 CDS YP_001229114.1 148262408 5165847 complement(386837..387826) 1 NC_009483.1 PFAM: respiratory-chain NADH dehydrogenase, subunit 1; NADH dehydrogenase (quinone) 387826 5165847 Gura_0325 Geobacter uraniireducens Rf4 NADH dehydrogenase (quinone) YP_001229114.1 386837 R 351605 CDS YP_001229115.1 148262409 5165848 complement(387823..389718) 1 NC_009483.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 389718 5165848 Gura_0326 Geobacter uraniireducens Rf4 NADH dehydrogenase subunit G YP_001229115.1 387823 R 351605 CDS YP_001229116.1 148262410 5164924 complement(389737..390624) 1 NC_009483.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase 390624 5164924 Gura_0327 Geobacter uraniireducens Rf4 diguanylate cyclase YP_001229116.1 389737 R 351605 CDS YP_001229117.1 148262411 5164925 complement(390626..391159) 1 NC_009483.1 PFAM: 4-vinyl reductase, 4VR; 4-vinyl reductase, 4VR 391159 5164925 Gura_0328 Geobacter uraniireducens Rf4 4-vinyl reductase, 4VR YP_001229117.1 390626 R 351605 CDS YP_001229118.1 148262412 5164926 complement(391190..392491) 1 NC_009483.1 PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; NADH dehydrogenase (quinone) 392491 5164926 Gura_0329 Geobacter uraniireducens Rf4 NADH dehydrogenase (quinone) YP_001229118.1 391190 R 351605 CDS YP_001229119.1 148262413 5164696 complement(392501..392839) 1 NC_009483.1 PFAM: protein of unknown function DUF488; hypothetical protein 392839 5164696 Gura_0330 Geobacter uraniireducens Rf4 hypothetical protein YP_001229119.1 392501 R 351605 CDS YP_001229120.1 148262414 5164697 complement(392896..393258) 1 NC_009483.1 PFAM: cytochrome c, class I; cytochrome c, class I 393258 5164697 Gura_0331 Geobacter uraniireducens Rf4 cytochrome c, class I YP_001229120.1 392896 R 351605 CDS YP_001229121.1 148262415 5164698 complement(393318..393791) 1 NC_009483.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 393791 5164698 Gura_0332 Geobacter uraniireducens Rf4 NADH dehydrogenase subunit E YP_001229121.1 393318 R 351605 CDS YP_001229122.1 148262416 5164573 complement(393908..396289) 1 NC_009483.1 NuoBCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; trifunctional NADH dehydrogenase I subunit B/C/D 396289 5164573 Gura_0333 Geobacter uraniireducens Rf4 trifunctional NADH dehydrogenase I subunit B/C/D YP_001229122.1 393908 R 351605 CDS YP_001229123.1 148262417 5164574 complement(396334..396771) 1 NC_009483.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 396771 5164574 Gura_0334 Geobacter uraniireducens Rf4 NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 YP_001229123.1 396334 R 351605 CDS YP_001229124.1 148262418 5164575 complement(396877..397329) 1 NC_009483.1 PFAM: Thioredoxin domain; Contains selenocysteine; thioredoxin domain-containing protein 397329 5164575 Gura_0335 Geobacter uraniireducens Rf4 thioredoxin domain-containing protein YP_001229124.1 396877 R 351605 CDS YP_001229125.1 148262419 5165878 complement(397429..398874) 1 NC_009483.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 398874 5165878 Gura_0336 Geobacter uraniireducens Rf4 glycine dehydrogenase subunit 2 YP_001229125.1 397429 R 351605 CDS YP_001229126.1 148262420 5165879 complement(398871..400199) 1 NC_009483.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 400199 5165879 Gura_0337 Geobacter uraniireducens Rf4 glycine dehydrogenase subunit 1 YP_001229126.1 398871 R 351605 CDS YP_001229127.1 148262421 5165880 complement(400199..400576) 1 NC_009483.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; glycine cleavage system H protein 400576 5165880 Gura_0338 Geobacter uraniireducens Rf4 glycine cleavage system H protein YP_001229127.1 400199 R 351605 CDS YP_001229128.1 148262422 5163623 complement(400640..401731) 1 NC_009483.1 TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; glycine cleavage system T protein 401731 5163623 Gura_0339 Geobacter uraniireducens Rf4 glycine cleavage system T protein YP_001229128.1 400640 R 351605 CDS YP_001229129.1 148262423 5163624 complement(402047..402637) 1 NC_009483.1 PFAM: CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase 402637 5163624 Gura_0340 Geobacter uraniireducens Rf4 zinc-binding CMP/dCMP deaminase YP_001229129.1 402047 R 351605 CDS YP_001229130.1 148262424 5164750 complement(403051..403614) 1 NC_009483.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 403614 5164750 Gura_0341 Geobacter uraniireducens Rf4 elongation factor P YP_001229130.1 403051 R 351605 CDS YP_001229131.1 148262425 5164751 403766..403963 1 NC_009483.1 PFAM: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 403963 5164751 Gura_0342 Geobacter uraniireducens Rf4 RNA-binding S4 domain-containing protein YP_001229131.1 403766 D 351605 CDS YP_001229132.1 148262426 5166215 complement(403972..404337) 1 NC_009483.1 involved in start site selection during the initiation of translation; translation initiation factor Sui1 404337 5166215 Gura_0343 Geobacter uraniireducens Rf4 translation initiation factor Sui1 YP_001229132.1 403972 R 351605 CDS YP_001229133.1 148262427 5166216 404514..406706 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 406706 5166216 Gura_0344 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001229133.1 404514 D 351605 CDS YP_001229134.1 148262428 5166217 complement(406803..407888) 1 NC_009483.1 member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 407888 5166217 Gura_0345 Geobacter uraniireducens Rf4 ribonuclease Z YP_001229134.1 406803 R 351605 CDS YP_001229135.1 148262429 5164786 408183..408515 1 NC_009483.1 PFAM: Cupin 2, conserved barrel domain protein; cupin 408515 5164786 Gura_0346 Geobacter uraniireducens Rf4 cupin YP_001229135.1 408183 D 351605 CDS YP_001229136.1 148262430 5164787 complement(408587..409600) 1 NC_009483.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 409600 5164787 Gura_0347 Geobacter uraniireducens Rf4 delta-aminolevulinic acid dehydratase YP_001229136.1 408587 R 351605 CDS YP_001229137.1 148262431 5164788 complement(409735..410253) 1 NC_009483.1 hypothetical protein 410253 5164788 Gura_0348 Geobacter uraniireducens Rf4 hypothetical protein YP_001229137.1 409735 R 351605 CDS YP_001229138.1 148262432 5163526 complement(410477..412564) 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 412564 5163526 Gura_0349 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001229138.1 410477 R 351605 CDS YP_001229139.1 148262433 5163527 complement(412674..413531) 1 NC_009483.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein 413531 5163527 Gura_0350 Geobacter uraniireducens Rf4 phosphonate ABC transporter periplasmic phosphonate-binding protein YP_001229139.1 412674 R 351605 CDS YP_001229140.1 148262434 5163528 413959..414960 1 NC_009483.1 PFAM: protein of unknown function DUF362; hypothetical protein 414960 5163528 Gura_0351 Geobacter uraniireducens Rf4 hypothetical protein YP_001229140.1 413959 D 351605 CDS YP_001229141.1 148262435 5164089 complement(415197..415511) 1 NC_009483.1 PFAM: plasmid stabilization system; plasmid stabilization system protein 415511 5164089 Gura_0352 Geobacter uraniireducens Rf4 plasmid stabilization system protein YP_001229141.1 415197 R 351605 CDS YP_001229142.1 148262436 5164090 complement(415508..415726) 1 NC_009483.1 TIGRFAM: putative addiction module component, TIGR02574 family; addiction module proein 415726 5164090 Gura_0353 Geobacter uraniireducens Rf4 addiction module proein YP_001229142.1 415508 R 351605 CDS YP_001229143.1 148262437 5164091 complement(415908..416225) 1 NC_009483.1 PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 416225 5164091 Gura_0354 Geobacter uraniireducens Rf4 DNA polymerase subunit beta YP_001229143.1 415908 R 351605 CDS YP_001229144.1 148262438 5166733 416558..416800 1 NC_009483.1 hypothetical protein 416800 5166733 Gura_0355 Geobacter uraniireducens Rf4 hypothetical protein YP_001229144.1 416558 D 351605 CDS YP_001229145.1 148262439 5166734 complement(417350..417658) 1 NC_009483.1 hypothetical protein 417658 5166734 Gura_0356 Geobacter uraniireducens Rf4 hypothetical protein YP_001229145.1 417350 R 351605 CDS YP_001229146.1 148262440 5164238 complement(417664..418053) 1 NC_009483.1 hypothetical protein 418053 5164238 Gura_0357 Geobacter uraniireducens Rf4 hypothetical protein YP_001229146.1 417664 R 351605 CDS YP_001229147.1 148262441 5164239 complement(418085..419617) 1 NC_009483.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; uroporphyrin-III C-methyltransferase 419617 5164239 Gura_0358 Geobacter uraniireducens Rf4 uroporphyrin-III C-methyltransferase YP_001229147.1 418085 R 351605 CDS YP_001229148.1 148262442 5164240 complement(419732..420688) 1 NC_009483.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 420688 hemC 5164240 hemC Geobacter uraniireducens Rf4 porphobilinogen deaminase YP_001229148.1 419732 R 351605 CDS YP_001229149.1 148262443 5164597 complement(420733..422037) 1 NC_009483.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 422037 hemA 5164597 hemA Geobacter uraniireducens Rf4 glutamyl-tRNA reductase YP_001229149.1 420733 R 351605 CDS YP_001229150.1 148262444 5164598 complement(422062..422877) 1 NC_009483.1 PFAM: cytochrome c assembly protein; cytochrome c assembly protein 422877 5164598 Gura_0361 Geobacter uraniireducens Rf4 cytochrome c assembly protein YP_001229150.1 422062 R 351605 CDS YP_001229151.1 148262445 5164599 complement(422874..423623) 1 NC_009483.1 TIGRFAM: siroheme synthase; siroheme synthase 423623 5164599 Gura_0362 Geobacter uraniireducens Rf4 siroheme synthase YP_001229151.1 422874 R 351605 CDS YP_001229152.1 148262446 5165949 423806..424135 1 NC_009483.1 TIGRFAM: thioredoxin; PFAM: Redoxin domain protein; Thioredoxin domain; thioredoxin 424135 5165949 Gura_0363 Geobacter uraniireducens Rf4 thioredoxin YP_001229152.1 423806 D 351605 CDS YP_001229153.1 148262447 5165950 424150..424662 1 NC_009483.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 424662 5165950 Gura_0364 Geobacter uraniireducens Rf4 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_001229153.1 424150 D 351605 CDS YP_001229154.1 148262448 5165951 complement(424699..426609) 1 NC_009483.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 426609 uvrC 5165951 uvrC Geobacter uraniireducens Rf4 excinuclease ABC subunit C YP_001229154.1 424699 R 351605 CDS YP_001229155.1 148262449 5163985 426784..429876 1 NC_009483.1 chromosome segregation ATPase-like protein 429876 5163985 Gura_0366 Geobacter uraniireducens Rf4 chromosome segregation ATPase-like protein YP_001229155.1 426784 D 351605 CDS YP_001229156.1 148262450 5163986 429878..430480 1 NC_009483.1 PFAM: Peptidoglycan-binding LysM; peptidoglycan-binding LysM 430480 5163986 Gura_0367 Geobacter uraniireducens Rf4 peptidoglycan-binding LysM YP_001229156.1 429878 D 351605 CDS YP_001229157.1 148262451 5163987 complement(430537..431595) 1 NC_009483.1 hypothetical protein 431595 5163987 Gura_0368 Geobacter uraniireducens Rf4 hypothetical protein YP_001229157.1 430537 R 351605 CDS YP_001229158.1 148262452 5163761 complement(431645..432841) 1 NC_009483.1 hypothetical protein 432841 5163761 Gura_0369 Geobacter uraniireducens Rf4 hypothetical protein YP_001229158.1 431645 R 351605 CDS YP_001229159.1 148262453 5163762 433315..434676 1 NC_009483.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase 434676 5163762 Gura_0370 Geobacter uraniireducens Rf4 DEAD/DEAH box helicase YP_001229159.1 433315 D 351605 CDS YP_001229160.1 148262454 5163763 434825..436012 1 NC_009483.1 PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; beta-lactamase domain-containing protein 436012 5163763 Gura_0371 Geobacter uraniireducens Rf4 beta-lactamase domain-containing protein YP_001229160.1 434825 D 351605 CDS YP_001229161.1 148262455 5166343 436158..436583 1 NC_009483.1 PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 436583 5166343 Gura_0372 Geobacter uraniireducens Rf4 DNA polymerase subunit beta YP_001229161.1 436158 D 351605 CDS YP_001229162.1 148262456 5166344 437335..438258 1 NC_009483.1 alpha-tubulin suppressor domain-containing protein 438258 5166344 Gura_0373 Geobacter uraniireducens Rf4 alpha-tubulin suppressor domain-containing protein YP_001229162.1 437335 D 351605 CDS YP_001229163.1 148262457 5166345 438582..440846 1 NC_009483.1 TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; primosomal protein N' 440846 5166345 Gura_0374 Geobacter uraniireducens Rf4 primosomal protein N' YP_001229163.1 438582 D 351605 CDS YP_001229164.1 148262458 5165604 complement(440919..442943) 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 442943 5165604 Gura_0375 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001229164.1 440919 R 351605 CDS YP_001229165.1 148262459 5165605 complement(443131..444432) 1 NC_009483.1 PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 444432 5165605 Gura_0376 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001229165.1 443131 R 351605 CDS YP_001229166.1 148262460 5165606 444626..445459 1 NC_009483.1 exonuclease-like protein 445459 5165606 Gura_0377 Geobacter uraniireducens Rf4 exonuclease-like protein YP_001229166.1 444626 D 351605 CDS YP_001229167.1 148262461 5165418 445541..446809 1 NC_009483.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase 446809 5165418 Gura_0378 Geobacter uraniireducens Rf4 diguanylate cyclase YP_001229167.1 445541 D 351605 CDS YP_001229168.1 148262462 5165419 complement(446856..447371) 1 NC_009483.1 hypothetical protein 447371 5165419 Gura_0379 Geobacter uraniireducens Rf4 hypothetical protein YP_001229168.1 446856 R 351605 CDS YP_001229169.1 148262463 5165420 447525..448286 1 NC_009483.1 hypothetical protein 448286 5165420 Gura_0380 Geobacter uraniireducens Rf4 hypothetical protein YP_001229169.1 447525 D 351605 CDS YP_001229170.1 148262464 5162727 448641..449954 1 NC_009483.1 PFAM: sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 449954 5162727 Gura_0381 Geobacter uraniireducens Rf4 sodium:dicarboxylate symporter YP_001229170.1 448641 D 351605 CDS YP_001229171.1 148262465 5162728 complement(450488..451168) 1 NC_009483.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Contains selenocysteine; alkyl hydroperoxide reductase 451168 5162728 Gura_0382 Geobacter uraniireducens Rf4 alkyl hydroperoxide reductase YP_001229171.1 450488 R 351605 CDS YP_001229172.1 148262466 5162729 complement(451529..456709) 1 NC_009483.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Fibronectin, type III domain protein; Cna B domain protein; APHP domain protein; SMART: Immunoglobulin subtype; peptidase S8/S53 subtilisin kexin sedolisin 456709 5162729 Gura_0383 Geobacter uraniireducens Rf4 peptidase S8/S53 subtilisin kexin sedolisin YP_001229172.1 451529 R 351605 CDS YP_001229173.1 148262467 5165500 complement(457429..458037) 1 NC_009483.1 hypothetical protein 458037 5165500 Gura_0384 Geobacter uraniireducens Rf4 hypothetical protein YP_001229173.1 457429 R 351605 CDS YP_001229174.1 148262468 5165501 complement(458438..458860) 1 NC_009483.1 hypothetical protein 458860 5165501 Gura_0385 Geobacter uraniireducens Rf4 hypothetical protein YP_001229174.1 458438 R 351605 CDS YP_001229175.1 148262469 5165502 459212..460033 1 NC_009483.1 SMART: PAS domain containing protein; putative PAS/PAC sensor protein 460033 5165502 Gura_0386 Geobacter uraniireducens Rf4 putative PAS/PAC sensor protein YP_001229175.1 459212 D 351605 CDS YP_001229176.1 148262470 5164671 460264..461334 1 NC_009483.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase 461334 5164671 Gura_0387 Geobacter uraniireducens Rf4 histidine kinase YP_001229176.1 460264 D 351605 CDS YP_001229177.1 148262471 5164672 complement(461404..461817) 1 NC_009483.1 hypothetical protein 461817 5164672 Gura_0388 Geobacter uraniireducens Rf4 hypothetical protein YP_001229177.1 461404 R 351605 CDS YP_001229178.1 148262472 5164673 complement(462248..463483) 1 NC_009483.1 hypothetical protein 463483 5164673 Gura_0389 Geobacter uraniireducens Rf4 hypothetical protein YP_001229178.1 462248 R 351605 CDS YP_001229179.1 148262473 5162801 complement(463724..464395) 1 NC_009483.1 hypothetical protein 464395 5162801 Gura_0390 Geobacter uraniireducens Rf4 hypothetical protein YP_001229179.1 463724 R 351605 CDS YP_001229180.1 148262474 5162802 complement(464388..464975) 1 NC_009483.1 hypothetical protein 464975 5162802 Gura_0391 Geobacter uraniireducens Rf4 hypothetical protein YP_001229180.1 464388 R 351605 CDS YP_001229181.1 148262475 5162803 complement(465148..465660) 1 NC_009483.1 hypothetical protein 465660 5162803 Gura_0392 Geobacter uraniireducens Rf4 hypothetical protein YP_001229181.1 465148 R 351605 CDS YP_001229182.1 148262476 5165413 465850..470373 1 NC_009483.1 PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase 470373 5165413 Gura_0393 Geobacter uraniireducens Rf4 glutamate synthase YP_001229182.1 465850 D 351605 CDS YP_001229183.1 148262477 5165414 470633..471892 1 NC_009483.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; acetate kinase 471892 5165414 Gura_0394 Geobacter uraniireducens Rf4 acetate kinase YP_001229183.1 470633 D 351605 CDS YP_001229184.1 148262478 5164157 471937..472407 1 NC_009483.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase 472407 5164157 Gura_0395 Geobacter uraniireducens Rf4 alkyl hydroperoxide reductase YP_001229184.1 471937 D 351605 CDS YP_001229185.1 148262479 5164158 472424..473251 1 NC_009483.1 PFAM: biotin/lipoate A/B protein ligase; biotin/lipoate A/B protein ligase 473251 5164158 Gura_0396 Geobacter uraniireducens Rf4 biotin/lipoate A/B protein ligase YP_001229185.1 472424 D 351605 CDS YP_001229186.1 148262480 5164159 complement(473424..473780) 1 NC_009483.1 hypothetical protein 473780 5164159 Gura_0397 Geobacter uraniireducens Rf4 hypothetical protein YP_001229186.1 473424 R 351605 CDS YP_001229187.1 148262481 5166370 complement(473857..475875) 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 475875 5166370 Gura_0398 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001229187.1 473857 R 351605 CDS YP_001229188.1 148262482 5166371 476403..477254 1 NC_009483.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 477254 5166371 Gura_0399 Geobacter uraniireducens Rf4 lipoyl synthase YP_001229188.1 476403 D 351605 CDS YP_001229189.1 148262483 5166372 477364..477960 1 NC_009483.1 PFAM: peptidase M23B; peptidase M23B 477960 5166372 Gura_0400 Geobacter uraniireducens Rf4 peptidase M23B YP_001229189.1 477364 D 351605 CDS YP_001229190.1 148262484 5163672 complement(477984..478406) 1 NC_009483.1 PFAM: protein of unknown function DUF309; hypothetical protein 478406 5163672 Gura_0401 Geobacter uraniireducens Rf4 hypothetical protein YP_001229190.1 477984 R 351605 CDS YP_001229191.1 148262485 5163673 complement(478421..478798) 1 NC_009483.1 hypothetical protein 478798 5163673 Gura_0402 Geobacter uraniireducens Rf4 hypothetical protein YP_001229191.1 478421 R 351605 CDS YP_001229192.1 148262486 5163674 479200..479862 1 NC_009483.1 hypothetical protein 479862 5163674 Gura_0403 Geobacter uraniireducens Rf4 hypothetical protein YP_001229192.1 479200 D 351605 CDS YP_001229193.1 148262487 5163490 complement(479859..480638) 1 NC_009483.1 PFAM: UbiA prenyltransferase; UbiA prenyltransferase 480638 5163490 Gura_0404 Geobacter uraniireducens Rf4 UbiA prenyltransferase YP_001229193.1 479859 R 351605 CDS YP_001229194.1 148262488 5163491 complement(480792..481652) 1 NC_009483.1 PFAM: cytochrome oxidase assembly; cytochrome oxidase assembly 481652 5163491 Gura_0405 Geobacter uraniireducens Rf4 cytochrome oxidase assembly YP_001229194.1 480792 R 351605 CDS YP_001229195.1 148262489 5163492 complement(481782..482045) 1 NC_009483.1 TIGRFAM: caa(3)-type oxidase, subunit IV; caa(3)-type oxidase subunit IV 482045 5163492 Gura_0406 Geobacter uraniireducens Rf4 caa(3)-type oxidase subunit IV YP_001229195.1 481782 R 351605 CDS YP_001229196.1 148262490 5163262 complement(482160..482750) 1 NC_009483.1 PFAM: cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 482750 5163262 Gura_0407 Geobacter uraniireducens Rf4 cytochrome c oxidase subunit III YP_001229196.1 482160 R 351605 CDS YP_001229197.1 148262491 5163263 complement(482841..484469) 1 NC_009483.1 PFAM: cytochrome c oxidase, subunit I; cytochrome-c oxidase 484469 5163263 Gura_0408 Geobacter uraniireducens Rf4 cytochrome-c oxidase YP_001229197.1 482841 R 351605 CDS YP_001229198.1 148262492 5163264 484657..484947 1 NC_009483.1 PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 484947 5163264 Gura_0409 Geobacter uraniireducens Rf4 DNA polymerase subunit beta YP_001229198.1 484657 D 351605 CDS YP_001229199.1 148262493 5164720 484940..485188 1 NC_009483.1 hypothetical protein 485188 5164720 Gura_0410 Geobacter uraniireducens Rf4 hypothetical protein YP_001229199.1 484940 D 351605 CDS YP_001229200.1 148262494 5164721 485354..485692 1 NC_009483.1 TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein-like; alkylphosphonate utilization operon protein PhnA 485692 5164721 Gura_0411 Geobacter uraniireducens Rf4 alkylphosphonate utilization operon protein PhnA YP_001229200.1 485354 D 351605 CDS YP_001229201.1 148262495 5164722 complement(485747..486049) 1 NC_009483.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; XRE family plasmid maintenance system antidote protein 486049 5164722 Gura_0412 Geobacter uraniireducens Rf4 XRE family plasmid maintenance system antidote protein YP_001229201.1 485747 R 351605 CDS YP_001229202.1 148262496 5166823 complement(486061..486342) 1 NC_009483.1 PFAM: plasmid maintenance system killer; plasmid maintenance system killer protein 486342 5166823 Gura_0413 Geobacter uraniireducens Rf4 plasmid maintenance system killer protein YP_001229202.1 486061 R 351605 CDS YP_001229203.1 148262497 5166824 complement(486460..487395) 1 NC_009483.1 TIGRFAM: cytochrome C oxidase subunit II, transmembrane region; PFAM: cytochrome c oxidase, subunit II; cytochrome c, class I; cytochrome C oxidase subunit II, transmembrane region 487395 5166824 Gura_0414 Geobacter uraniireducens Rf4 cytochrome C oxidase subunit II, transmembrane region YP_001229203.1 486460 R 351605 CDS YP_001229204.1 148262498 5166825 complement(487402..488301) 1 NC_009483.1 hypothetical protein 488301 5166825 Gura_0415 Geobacter uraniireducens Rf4 hypothetical protein YP_001229204.1 487402 R 351605 CDS YP_001229205.1 148262499 5163738 488500..488685 1 NC_009483.1 hypothetical protein 488685 5163738 Gura_0416 Geobacter uraniireducens Rf4 hypothetical protein YP_001229205.1 488500 D 351605 CDS YP_001229206.1 148262500 5163739 488703..489047 1 NC_009483.1 hypothetical protein 489047 5163739 Gura_0417 Geobacter uraniireducens Rf4 hypothetical protein YP_001229206.1 488703 D 351605 CDS YP_001229207.1 148262501 5163740 489034..490905 1 NC_009483.1 PFAM: V-type ATPase, 116 kDa subunit; H(+)-transporting two-sector ATPase 490905 5163740 Gura_0418 Geobacter uraniireducens Rf4 H(+)-transporting two-sector ATPase YP_001229207.1 489034 D 351605 CDS YP_001229208.1 148262502 5164440 490920..491132 1 NC_009483.1 PFAM: H+-transporting two-sector ATPase, C subunit; H+-transporting two-sector ATPase subunit C 491132 5164440 Gura_0419 Geobacter uraniireducens Rf4 H+-transporting two-sector ATPase subunit C YP_001229208.1 490920 D 351605 CDS YP_001229209.1 148262503 5164441 491145..491708 1 NC_009483.1 PFAM: H+-transporting two-sector ATPase, E subunit; H+-transporting two-sector ATPase subunit E 491708 5164441 Gura_0420 Geobacter uraniireducens Rf4 H+-transporting two-sector ATPase subunit E YP_001229209.1 491145 D 351605 CDS YP_001229210.1 148262504 5164442 492675..492995 1 NC_009483.1 PFAM: Vacuolar H+-transporting two-sector ATPase, F subunit; vacuolar H+-transporting two-sector ATPase F 492995 5164442 Gura_0421 Geobacter uraniireducens Rf4 vacuolar H+-transporting two-sector ATPase F YP_001229210.1 492675 D 351605 CDS YP_001229211.1 148262505 5166432 493028..494602 1 NC_009483.1 PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; H+-transporting two-sector ATPase subunit alpha/beta, central region 494602 5166432 Gura_0422 Geobacter uraniireducens Rf4 H+-transporting two-sector ATPase subunit alpha/beta, central region YP_001229211.1 493028 D 351605 CDS YP_001229212.1 148262506 5166433 494674..496206 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 496206 5166433 Gura_0423 Geobacter uraniireducens Rf4 PAS/PAC sensor signal transduction histidine kinase YP_001229212.1 494674 D 351605 CDS YP_001229213.1 148262507 5166434 496447..497769 1 NC_009483.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit B 497769 5166434 Gura_0424 Geobacter uraniireducens Rf4 V-type ATP synthase subunit B YP_001229213.1 496447 D 351605 CDS YP_001229214.1 148262508 5163535 497766..498389 1 NC_009483.1 TIGRFAM: V-type ATPase, D subunit; PFAM: H+-transporting two-sector ATPase, D subunit; V-type ATPase subunit D 498389 5163535 Gura_0425 Geobacter uraniireducens Rf4 V-type ATPase subunit D YP_001229214.1 497766 D 351605 CDS YP_001229215.1 148262509 5163536 498649..499902 1 NC_009483.1 PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 499902 5163536 Gura_0426 Geobacter uraniireducens Rf4 filamentation induced by cAMP protein fic YP_001229215.1 498649 D 351605 CDS YP_001229216.1 148262510 5163537 500043..500909 1 NC_009483.1 PFAM: MscS Mechanosensitive ion channel; mechanosensitive ion channel MscS 500909 5163537 Gura_0427 Geobacter uraniireducens Rf4 mechanosensitive ion channel MscS YP_001229216.1 500043 D 351605 CDS YP_001229217.1 148262511 5166820 complement(501004..501507) 1 NC_009483.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; molybdopterin-guanine dinucleotide biosynthesis protein B 501507 5166820 Gura_0428 Geobacter uraniireducens Rf4 molybdopterin-guanine dinucleotide biosynthesis protein B YP_001229217.1 501004 R 351605 CDS YP_001229218.1 148262512 5166821 501792..501986 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 501986 5166821 Gura_0429 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001229218.1 501792 D 351605 CDS YP_001229219.1 148262513 5166822 502225..502710 1 NC_009483.1 PFAM: Rubrerythrin; rubrerythrin 502710 5166822 Gura_0430 Geobacter uraniireducens Rf4 rubrerythrin YP_001229219.1 502225 D 351605 CDS YP_001229220.1 148262514 5163502 502718..502921 1 NC_009483.1 SMART: PAS domain containing protein; putative PAS/PAC sensor protein 502921 5163502 Gura_0431 Geobacter uraniireducens Rf4 putative PAS/PAC sensor protein YP_001229220.1 502718 D 351605 CDS YP_001229221.1 148262515 5163503 complement(502918..503628) 1 NC_009483.1 PFAM: protein of unknown function DUF542, ScdA domain protein; Hemerythrin HHE cation binding domain protein; hypothetical protein 503628 5163503 Gura_0432 Geobacter uraniireducens Rf4 hypothetical protein YP_001229221.1 502918 R 351605 CDS YP_001229222.1 148262516 5163504 504512..505813 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 505813 5163504 Gura_0433 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001229222.1 504512 D 351605 CDS YP_001229223.1 148262517 5166269 complement(505869..506555) 1 NC_009483.1 PFAM: cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis transmembrane protein 506555 5166269 Gura_0434 Geobacter uraniireducens Rf4 cytochrome c biogenesis transmembrane protein YP_001229223.1 505869 R 351605 CDS YP_001229224.1 148262518 5166270 complement(506552..506929) 1 NC_009483.1 PFAM: Thioredoxin domain; thioredoxin domain-containing protein 506929 5166270 Gura_0435 Geobacter uraniireducens Rf4 thioredoxin domain-containing protein YP_001229224.1 506552 R 351605 CDS YP_001229225.1 148262519 5166271 complement(506926..507156) 1 NC_009483.1 TIGRFAM: redox-active disulfide protein 2; redox-active disulfide protein 2 507156 5166271 Gura_0436 Geobacter uraniireducens Rf4 redox-active disulfide protein 2 YP_001229225.1 506926 R 351605 CDS YP_001229226.1 148262520 5166796 complement(507194..507637) 1 NC_009483.1 SMART: Rhodanese domain protein; rhodanese domain-containing protein 507637 5166796 Gura_0437 Geobacter uraniireducens Rf4 rhodanese domain-containing protein YP_001229226.1 507194 R 351605 CDS YP_001229227.1 148262521 5166797 complement(507676..508623) 1 NC_009483.1 PFAM: permease; permease 508623 5166797 Gura_0438 Geobacter uraniireducens Rf4 permease YP_001229227.1 507676 R 351605 CDS YP_001229228.1 148262522 5166798 complement(508689..509003) 1 NC_009483.1 PFAM: regulatory protein, ArsR; regulatory protein ArsR 509003 5166798 Gura_0439 Geobacter uraniireducens Rf4 regulatory protein ArsR YP_001229228.1 508689 R 351605 CDS YP_001229229.1 148262523 5162819 complement(509073..509345) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 509345 5162819 Gura_0440 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001229229.1 509073 R 351605 CDS YP_001229230.1 148262524 5162820 complement(509359..509718) 1 NC_009483.1 heterodisulfide reductase subunit A-like protein 509718 5162820 Gura_0441 Geobacter uraniireducens Rf4 heterodisulfide reductase subunit A-like protein YP_001229230.1 509359 R 351605 CDS YP_001229231.1 148262525 5162821 complement(509814..510764) 1 NC_009483.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator 510764 5162821 Gura_0442 Geobacter uraniireducens Rf4 LysR family transcriptional regulator YP_001229231.1 509814 R 351605 CDS YP_001229232.1 148262526 5163588 complement(510843..512018) 1 NC_009483.1 PFAM: transposase, IS4 family protein; transposase, IS4 family protein 512018 5163588 Gura_0443 Geobacter uraniireducens Rf4 transposase, IS4 family protein YP_001229232.1 510843 R 351605 CDS YP_001229233.1 148262527 5163589 512289..514214 1 NC_009483.1 SMART: Rhodanese domain protein; rhodanese domain-containing protein 514214 5163589 Gura_0444 Geobacter uraniireducens Rf4 rhodanese domain-containing protein YP_001229233.1 512289 D 351605 CDS YP_001229234.1 148262528 5162936 514299..515504 1 NC_009483.1 PFAM: phosphate-selective porin O and P; phosphate-selective porin O and P 515504 5162936 Gura_0445 Geobacter uraniireducens Rf4 phosphate-selective porin O and P YP_001229234.1 514299 D 351605 CDS YP_001229235.1 148262529 5162937 515542..515859 1 NC_009483.1 hypothetical protein 515859 5162937 Gura_0446 Geobacter uraniireducens Rf4 hypothetical protein YP_001229235.1 515542 D 351605 CDS YP_001229236.1 148262530 5162938 515915..516886 1 NC_009483.1 hypothetical protein 516886 5162938 Gura_0447 Geobacter uraniireducens Rf4 hypothetical protein YP_001229236.1 515915 D 351605 CDS YP_001229237.1 148262531 5163880 516944..517273 1 NC_009483.1 hypothetical protein 517273 5163880 Gura_0448 Geobacter uraniireducens Rf4 hypothetical protein YP_001229237.1 516944 D 351605 CDS YP_001229238.1 148262532 5163881 complement(517345..518325) 1 NC_009483.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator 518325 5163881 Gura_0449 Geobacter uraniireducens Rf4 LysR family transcriptional regulator YP_001229238.1 517345 R 351605 CDS YP_001229239.1 148262533 5163882 518519..519895 1 NC_009483.1 SMART: Rhodanese domain protein; rhodanese domain-containing protein 519895 5163882 Gura_0450 Geobacter uraniireducens Rf4 rhodanese domain-containing protein YP_001229239.1 518519 D 351605 CDS YP_001229240.1 148262534 5166707 519972..521177 1 NC_009483.1 PFAM: phosphate-selective porin O and P; phosphate-selective porin O and P 521177 5166707 Gura_0451 Geobacter uraniireducens Rf4 phosphate-selective porin O and P YP_001229240.1 519972 D 351605 CDS YP_001229241.1 148262535 5166708 521226..521546 1 NC_009483.1 hypothetical protein 521546 5166708 Gura_0452 Geobacter uraniireducens Rf4 hypothetical protein YP_001229241.1 521226 D 351605 CDS YP_001229242.1 148262536 5166709 521603..522577 1 NC_009483.1 hypothetical protein 522577 5166709 Gura_0453 Geobacter uraniireducens Rf4 hypothetical protein YP_001229242.1 521603 D 351605 CDS YP_001229243.1 148262537 5166829 522635..522955 1 NC_009483.1 hypothetical protein 522955 5166829 Gura_0454 Geobacter uraniireducens Rf4 hypothetical protein YP_001229243.1 522635 D 351605 CDS YP_001229244.1 148262538 5166830 523111..524973 1 NC_009483.1 hypothetical protein 524973 5166830 Gura_0455 Geobacter uraniireducens Rf4 hypothetical protein YP_001229244.1 523111 D 351605 CDS YP_001229245.1 148262539 5166831 524939..526177 1 NC_009483.1 hypothetical protein 526177 5166831 Gura_0456 Geobacter uraniireducens Rf4 hypothetical protein YP_001229245.1 524939 D 351605 CDS YP_001229246.1 148262540 5165884 526132..526524 1 NC_009483.1 PFAM: Rieske [2Fe-2S] domain protein; Rieske (2Fe-2S) domain-containing protein 526524 5165884 Gura_0457 Geobacter uraniireducens Rf4 Rieske (2Fe-2S) domain-containing protein YP_001229246.1 526132 D 351605 CDS YP_001229247.1 148262541 5165885 526546..527166 1 NC_009483.1 PFAM: Cytochrome b/b6, N-terminal domain; cytochrome b/b6 domain-containing protein 527166 5165885 Gura_0458 Geobacter uraniireducens Rf4 cytochrome b/b6 domain-containing protein YP_001229247.1 526546 D 351605 CDS YP_001229248.1 148262542 5165886 527163..527579 1 NC_009483.1 hypothetical protein 527579 5165886 Gura_0459 Geobacter uraniireducens Rf4 hypothetical protein YP_001229248.1 527163 D 351605 CDS YP_001229249.1 148262543 5163111 527579..528361 1 NC_009483.1 hypothetical protein 528361 5163111 Gura_0460 Geobacter uraniireducens Rf4 hypothetical protein YP_001229249.1 527579 D 351605 CDS YP_001229250.1 148262544 5163112 528400..528711 1 NC_009483.1 hypothetical protein 528711 5163112 Gura_0461 Geobacter uraniireducens Rf4 hypothetical protein YP_001229250.1 528400 D 351605 CDS YP_001229251.1 148262545 5163113 complement(528784..529998) 1 NC_009483.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; molybdenum cofactor synthesis domain-containing protein 529998 5163113 Gura_0462 Geobacter uraniireducens Rf4 molybdenum cofactor synthesis domain-containing protein YP_001229251.1 528784 R 351605 CDS YP_001229252.1 148262546 5162807 complement(530094..530597) 1 NC_009483.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; molybdopterin-guanine dinucleotide biosynthesis protein B 530597 5162807 Gura_0463 Geobacter uraniireducens Rf4 molybdopterin-guanine dinucleotide biosynthesis protein B YP_001229252.1 530094 R 351605 CDS YP_001229253.1 148262547 5162808 complement(530594..531190) 1 NC_009483.1 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein 531190 5162808 Gura_0464 Geobacter uraniireducens Rf4 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein YP_001229253.1 530594 R 351605 CDS YP_001229254.1 148262548 5162809 complement(531564..532067) 1 NC_009483.1 hypothetical protein 532067 5162809 Gura_0465 Geobacter uraniireducens Rf4 hypothetical protein YP_001229254.1 531564 R 351605 CDS YP_001229255.1 148262549 5163230 complement(532149..532715) 1 NC_009483.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 532715 5163230 Gura_0466 Geobacter uraniireducens Rf4 ECF subfamily RNA polymerase sigma-24 factor YP_001229255.1 532149 R 351605 CDS YP_001229256.1 148262550 5163231 complement(532712..533764) 1 NC_009483.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; arsenical-resistance protein 533764 5163231 Gura_0467 Geobacter uraniireducens Rf4 arsenical-resistance protein YP_001229256.1 532712 R 351605 CDS YP_001229257.1 148262551 5163232 complement(533922..534263) 1 NC_009483.1 PFAM: regulatory protein, ArsR; regulatory protein ArsR 534263 5163232 Gura_0468 Geobacter uraniireducens Rf4 regulatory protein ArsR YP_001229257.1 533922 R 351605 CDS YP_001229258.1 148262552 5163439 534546..534854 1 NC_009483.1 hypothetical protein 534854 5163439 Gura_0469 Geobacter uraniireducens Rf4 hypothetical protein YP_001229258.1 534546 D 351605 CDS YP_001229259.1 148262553 5163440 534865..537432 1 NC_009483.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase 537432 5163440 Gura_0470 Geobacter uraniireducens Rf4 molybdopterin oxidoreductase YP_001229259.1 534865 D 351605 CDS YP_001229260.1 148262554 5163332 538376..539017 1 NC_009483.1 PFAM: cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 539017 5163332 Gura_0472 Geobacter uraniireducens Rf4 cytoplasmic chaperone TorD family protein YP_001229260.1 538376 D 351605 CDS YP_001229261.1 148262555 5163333 539010..539954 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 539954 5163333 Gura_0473 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001229261.1 539010 D 351605 CDS YP_001229262.1 148262556 5163334 540129..540887 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 540887 5163334 Gura_0474 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001229262.1 540129 D 351605 CDS YP_001229263.1 148262557 5164662 541145..541936 1 NC_009483.1 phosphate ABC transporter periplasmic component-like protein 541936 5164662 Gura_0475 Geobacter uraniireducens Rf4 phosphate ABC transporter periplasmic component-like protein YP_001229263.1 541145 D 351605 CDS YP_001229264.1 148262558 5164663 542030..544522 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 544522 5164663 Gura_0476 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001229264.1 542030 D 351605 CDS YP_001229265.1 148262559 5164664 544705..547929 1 NC_009483.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase 547929 5164664 Gura_0477 Geobacter uraniireducens Rf4 molybdopterin oxidoreductase YP_001229265.1 544705 D 351605 CDS YP_001229266.1 148262560 5165035 548132..549832 1 NC_009483.1 PFAM: adenosine/AMP deaminase; adenosine/AMP deaminase 549832 5165035 Gura_0478 Geobacter uraniireducens Rf4 adenosine/AMP deaminase YP_001229266.1 548132 D 351605 CDS YP_001229267.1 148262561 5165036 550285..550752 1 NC_009483.1 PFAM: regulatory protein, MarR; MarR family transcriptional regulator 550752 5165036 Gura_0479 Geobacter uraniireducens Rf4 MarR family transcriptional regulator YP_001229267.1 550285 D 351605 CDS YP_001229268.1 148262562 5165037 550973..551929 1 NC_009483.1 CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)-like protein 551929 5165037 Gura_0480 Geobacter uraniireducens Rf4 CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)-like protein YP_001229268.1 550973 D 351605 CDS YP_001229269.1 148262563 5163469 551947..552237 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 552237 5163469 Gura_0481 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001229269.1 551947 D 351605 CDS YP_001229270.1 148262564 5163470 complement(552250..552834) 1 NC_009483.1 hypothetical protein 552834 5163470 Gura_0482 Geobacter uraniireducens Rf4 hypothetical protein YP_001229270.1 552250 R 351605 CDS YP_001229271.1 148262565 5163471 complement(552894..553184) 1 NC_009483.1 hypothetical protein 553184 5163471 Gura_0483 Geobacter uraniireducens Rf4 hypothetical protein YP_001229271.1 552894 R 351605 CDS YP_001229272.1 148262566 5166043 complement(553432..554202) 1 NC_009483.1 TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; putative CoA-substrate-specific enzyme activase 554202 5166043 Gura_0484 Geobacter uraniireducens Rf4 putative CoA-substrate-specific enzyme activase YP_001229272.1 553432 R 351605 CDS YP_001229273.1 148262567 5166044 complement(554204..555205) 1 NC_009483.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; 2-hydroxyglutaryl-CoA dehydratase subunit D 555205 5166044 Gura_0485 Geobacter uraniireducens Rf4 2-hydroxyglutaryl-CoA dehydratase subunit D YP_001229273.1 554204 R 351605 CDS YP_001229274.1 148262568 5166045 complement(555212..555553) 1 NC_009483.1 hypothetical protein 555553 5166045 Gura_0486 Geobacter uraniireducens Rf4 hypothetical protein YP_001229274.1 555212 R 351605 CDS YP_001229275.1 148262569 5163559 555700..556566 1 NC_009483.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 556566 5163559 Gura_0487 Geobacter uraniireducens Rf4 glutamate racemase YP_001229275.1 555700 D 351605 CDS YP_001229276.1 148262570 5163560 556553..557125 1 NC_009483.1 hypothetical protein 557125 5163560 Gura_0488 Geobacter uraniireducens Rf4 hypothetical protein YP_001229276.1 556553 D 351605 CDS YP_001229277.1 148262571 5163561 557181..559595 1 NC_009483.1 PFAM: dihydropteroate synthase, DHPS; homocysteine S-methyltransferase; Methionine synthase, B12-binding module, cap domain protein; cobalamin B12-binding domain protein; homocysteine S-methyltransferase 559595 5163561 Gura_0489 Geobacter uraniireducens Rf4 homocysteine S-methyltransferase YP_001229277.1 557181 D 351605 CDS YP_001229278.1 148262572 5163883 559720..560115 1 NC_009483.1 hypothetical protein 560115 5163883 Gura_0490 Geobacter uraniireducens Rf4 hypothetical protein YP_001229278.1 559720 D 351605 CDS YP_001229279.1 148262573 5163884 560149..560979 1 NC_009483.1 PFAM: Transketolase domain protein; transketolase domain-containing protein 560979 5163884 Gura_0491 Geobacter uraniireducens Rf4 transketolase domain-containing protein YP_001229279.1 560149 D 351605 CDS YP_001229280.1 148262574 5163885 561079..562017 1 NC_009483.1 PFAM: Transketolase, central region; Transketolase domain protein; transketolase, central region 562017 5163885 Gura_0492 Geobacter uraniireducens Rf4 transketolase, central region YP_001229280.1 561079 D 351605 CDS YP_001229281.1 148262575 5164975 562018..562596 1 NC_009483.1 hypothetical protein 562596 5164975 Gura_0493 Geobacter uraniireducens Rf4 hypothetical protein YP_001229281.1 562018 D 351605 CDS YP_001229282.1 148262576 5164976 562644..564119 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 564119 5164976 Gura_0494 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001229282.1 562644 D 351605 CDS YP_001229283.1 148262577 5164309 564227..565597 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 565597 5164309 Gura_0495 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001229283.1 564227 D 351605 CDS YP_001229284.1 148262578 5164310 565937..568750 1 NC_009483.1 PFAM: NHL repeat containing protein; NHL repeat-containing protein 568750 5164310 Gura_0496 Geobacter uraniireducens Rf4 NHL repeat-containing protein YP_001229284.1 565937 D 351605 CDS YP_001229285.1 148262579 5164311 568844..572005 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 572005 5164311 Gura_0497 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001229285.1 568844 D 351605 CDS YP_001229286.1 148262580 5162867 572750..576595 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 576595 5162867 Gura_0498 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001229286.1 572750 D 351605 CDS YP_001229287.1 148262581 5162868 576692..580831 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 580831 5162868 Gura_0499 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001229287.1 576692 D 351605 CDS YP_001229288.1 148262582 5162869 580928..585418 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 585418 5162869 Gura_0500 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001229288.1 580928 D 351605 CDS YP_001229289.1 148262583 5164041 585534..586907 1 NC_009483.1 hypothetical protein 586907 5164041 Gura_0501 Geobacter uraniireducens Rf4 hypothetical protein YP_001229289.1 585534 D 351605 CDS YP_001229290.1 148262584 5164042 587090..588334 1 NC_009483.1 PFAM: glycosyl transferase, family 39; glycosyl transferase family protein 588334 5164042 Gura_0502 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001229290.1 587090 D 351605 CDS YP_001229291.1 148262585 5164043 588520..588939 1 NC_009483.1 hypothetical protein 588939 5164043 Gura_0503 Geobacter uraniireducens Rf4 hypothetical protein YP_001229291.1 588520 D 351605 CDS YP_001229292.1 148262586 5164809 complement(588988..590403) 1 NC_009483.1 PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 590403 5164809 Gura_0504 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001229292.1 588988 R 351605 CDS YP_001229293.1 148262587 5164810 complement(590455..591558) 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 591558 5164810 Gura_0505 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001229293.1 590455 R 351605 CDS YP_001229294.1 148262588 5164811 complement(591555..592622) 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 592622 5164811 Gura_0506 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001229294.1 591555 R 351605 CDS YP_001229295.1 148262589 5163078 complement(592619..593839) 1 NC_009483.1 PFAM: glycosyl transferase, family 9; glycosyl transferase family protein 593839 5163078 Gura_0507 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001229295.1 592619 R 351605 CDS YP_001229296.1 148262590 5163079 complement(593836..594891) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 594891 5163079 Gura_0508 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001229296.1 593836 R 351605 CDS YP_001229297.1 148262591 5163080 complement(594888..595967) 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 595967 5163080 Gura_0509 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001229297.1 594888 R 351605 CDS YP_001229298.1 148262592 5166896 596161..597324 1 NC_009483.1 hypothetical protein 597324 5166896 Gura_0510 Geobacter uraniireducens Rf4 hypothetical protein YP_001229298.1 596161 D 351605 CDS YP_001229299.1 148262593 5166897 597562..598389 1 NC_009483.1 PFAM: cytochrome c assembly protein; cytochrome c assembly protein 598389 5166897 Gura_0511 Geobacter uraniireducens Rf4 cytochrome c assembly protein YP_001229299.1 597562 D 351605 CDS YP_001229300.1 148262594 5166898 598446..598928 1 NC_009483.1 hypothetical protein 598928 5166898 Gura_0512 Geobacter uraniireducens Rf4 hypothetical protein YP_001229300.1 598446 D 351605 CDS YP_001229301.1 148262595 5164437 598929..600266 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 600266 5164437 Gura_0513 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001229301.1 598929 D 351605 CDS YP_001229302.1 148262596 5164438 600610..602088 1 NC_009483.1 hypothetical protein 602088 5164438 Gura_0514 Geobacter uraniireducens Rf4 hypothetical protein YP_001229302.1 600610 D 351605 CDS YP_001229303.1 148262597 5164439 602447..602797 1 NC_009483.1 hypothetical protein 602797 5164439 Gura_0515 Geobacter uraniireducens Rf4 hypothetical protein YP_001229303.1 602447 D 351605 CDS YP_001229304.1 148262598 5165262 603129..604634 1 NC_009483.1 PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 604634 5165262 Gura_0516 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001229304.1 603129 D 351605 CDS YP_001229305.1 148262599 5165263 complement(604800..606026) 1 NC_009483.1 hypothetical protein 606026 5165263 Gura_0517 Geobacter uraniireducens Rf4 hypothetical protein YP_001229305.1 604800 R 351605 CDS YP_001229306.1 148262600 5163886 complement(606719..607318) 1 NC_009483.1 PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein 607318 5163886 Gura_0519 Geobacter uraniireducens Rf4 OmpA/MotB domain-containing protein YP_001229306.1 606719 R 351605 CDS YP_001229307.1 148262601 5163887 complement(607519..607830) 1 NC_009483.1 hypothetical protein 607830 5163887 Gura_0520 Geobacter uraniireducens Rf4 hypothetical protein YP_001229307.1 607519 R 351605 CDS YP_001229308.1 148262602 5163888 608028..609179 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 609179 5163888 Gura_0521 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001229308.1 608028 D 351605 CDS YP_001229309.1 148262603 5165404 609362..610675 1 NC_009483.1 ResB protein required for cytochrome c biosynthesis-like protein 610675 5165404 Gura_0522 Geobacter uraniireducens Rf4 ResB protein required for cytochrome c biosynthesis-like protein YP_001229309.1 609362 D 351605 CDS YP_001229310.1 148262604 5165405 610672..611502 1 NC_009483.1 PFAM: cytochrome c assembly protein; cytochrome c assembly protein 611502 5165405 Gura_0523 Geobacter uraniireducens Rf4 cytochrome c assembly protein YP_001229310.1 610672 D 351605 CDS YP_001229311.1 148262605 5165406 complement(611566..612672) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 612672 5165406 Gura_0524 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001229311.1 611566 R 351605 CDS YP_001229312.1 148262606 5165327 612897..613631 1 NC_009483.1 response regulator receiver protein 613631 5165327 Gura_0525 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001229312.1 612897 D 351605 CDS YP_001229313.1 148262607 5165328 614257..615789 1 NC_009483.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein 615789 5165328 Gura_0526 Geobacter uraniireducens Rf4 RND efflux system outer membrane lipoprotein YP_001229313.1 614257 D 351605 CDS YP_001229314.1 148262608 5165329 615909..617039 1 NC_009483.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 617039 5165329 Gura_0527 Geobacter uraniireducens Rf4 RND family efflux transporter MFP subunit YP_001229314.1 615909 D 351605 CDS YP_001229315.1 148262609 5164769 617238..620318 1 NC_009483.1 PFAM: acriflavin resistance protein; acriflavin resistance protein 620318 5164769 Gura_0528 Geobacter uraniireducens Rf4 acriflavin resistance protein YP_001229315.1 617238 D 351605 CDS YP_001229316.1 148262610 5164770 620320..621345 1 NC_009483.1 hypothetical protein 621345 5164770 Gura_0529 Geobacter uraniireducens Rf4 hypothetical protein YP_001229316.1 620320 D 351605 CDS YP_001229317.1 148262611 5164771 complement(621360..622157) 1 NC_009483.1 PFAM: regulatory protein, IclR; regulatory protein IclR 622157 5164771 Gura_0530 Geobacter uraniireducens Rf4 regulatory protein IclR YP_001229317.1 621360 R 351605 CDS YP_001229318.1 148262612 5165330 622464..622640 1 NC_009483.1 hypothetical protein 622640 5165330 Gura_0531 Geobacter uraniireducens Rf4 hypothetical protein YP_001229318.1 622464 D 351605 CDS YP_001229319.1 148262613 5165331 622711..623082 1 NC_009483.1 PFAM: regulatory protein, IclR; regulatory protein IclR 623082 5165331 Gura_0532 Geobacter uraniireducens Rf4 regulatory protein IclR YP_001229319.1 622711 D 351605 CDS YP_001229320.1 148262614 5165332 complement(623107..625395) 1 NC_009483.1 PFAM: outer membrane efflux protein; Sporulation domain protein; outer membrane efflux protein 625395 5165332 Gura_0533 Geobacter uraniireducens Rf4 outer membrane efflux protein YP_001229320.1 623107 R 351605 CDS YP_001229321.1 148262615 5165091 complement(625517..626065) 1 NC_009483.1 hypothetical protein 626065 5165091 Gura_0534 Geobacter uraniireducens Rf4 hypothetical protein YP_001229321.1 625517 R 351605 CDS YP_001229322.1 148262616 5165092 626723..627712 1 NC_009483.1 TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; putative ribonuclease BN 627712 5165092 Gura_0535 Geobacter uraniireducens Rf4 putative ribonuclease BN YP_001229322.1 626723 D 351605 CDS YP_001229323.1 148262617 5165093 627749..628741 1 NC_009483.1 PFAM: purine or other phosphorylase, family 1; purine phosphorylase family 1 628741 5165093 Gura_0536 Geobacter uraniireducens Rf4 purine phosphorylase family 1 YP_001229323.1 627749 D 351605 CDS YP_001229324.1 148262618 5163040 complement(628707..629951) 1 NC_009483.1 PFAM: amidohydrolase 2; amidohydrolase 2 629951 5163040 Gura_0537 Geobacter uraniireducens Rf4 amidohydrolase 2 YP_001229324.1 628707 R 351605 CDS YP_001229325.1 148262619 5163041 complement(630033..630488) 1 NC_009483.1 hypothetical protein 630488 5163041 Gura_0538 Geobacter uraniireducens Rf4 hypothetical protein YP_001229325.1 630033 R 351605 CDS YP_001229326.1 148262620 5163042 complement(630750..631673) 1 NC_009483.1 hypothetical protein 631673 5163042 Gura_0539 Geobacter uraniireducens Rf4 hypothetical protein YP_001229326.1 630750 R 351605 CDS YP_001229327.1 148262621 5166066 complement(632075..633361) 1 NC_009483.1 hypothetical protein 633361 5166066 Gura_0540 Geobacter uraniireducens Rf4 hypothetical protein YP_001229327.1 632075 R 351605 CDS YP_001229328.1 148262622 5166067 633551..635314 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 635314 5166067 Gura_0541 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001229328.1 633551 D 351605 CDS YP_001229329.1 148262623 5166068 complement(635374..635883) 1 NC_009483.1 TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; hydrogenase maturation peptidase superfamily; PFAM: peptidase M52, hydrogen uptake protein; hydrogenase expression/formation protein 635883 5166068 Gura_0542 Geobacter uraniireducens Rf4 hydrogenase expression/formation protein YP_001229329.1 635374 R 351605 CDS YP_001229330.1 148262624 5163160 complement(635890..636546) 1 NC_009483.1 TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; Ni/Fe-hydrogenase, b-type cytochrome subunit 636546 5163160 Gura_0543 Geobacter uraniireducens Rf4 Ni/Fe-hydrogenase, b-type cytochrome subunit YP_001229330.1 635890 R 351605 CDS YP_001229331.1 148262625 5163161 complement(636557..638257) 1 NC_009483.1 PFAM: nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase, large subunit 638257 5163161 Gura_0544 Geobacter uraniireducens Rf4 nickel-dependent hydrogenase, large subunit YP_001229331.1 636557 R 351605 CDS YP_001229332.1 148262626 5165525 complement(638262..639383) 1 NC_009483.1 TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein; hydrogenase (NiFe) small subunit HydA 639383 5165525 Gura_0545 Geobacter uraniireducens Rf4 hydrogenase (NiFe) small subunit HydA YP_001229332.1 638262 R 351605 CDS YP_001229333.1 148262627 5165526 complement(639679..640479) 1 NC_009483.1 hypothetical protein 640479 5165526 Gura_0546 Geobacter uraniireducens Rf4 hypothetical protein YP_001229333.1 639679 R 351605 CDS YP_001229334.1 148262628 5165527 640745..643831 1 NC_009483.1 PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; hypothetical protein 643831 5165527 Gura_0547 Geobacter uraniireducens Rf4 hypothetical protein YP_001229334.1 640745 D 351605 CDS YP_001229335.1 148262629 5165026 643825..645450 1 NC_009483.1 PFAM: N-6 DNA methylase; N-6 DNA methylase 645450 5165026 Gura_0548 Geobacter uraniireducens Rf4 N-6 DNA methylase YP_001229335.1 643825 D 351605 CDS YP_001229336.1 148262630 5165027 645443..646600 1 NC_009483.1 PFAM: restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit 646600 5165027 Gura_0549 Geobacter uraniireducens Rf4 restriction modification system DNA specificity subunit YP_001229336.1 645443 D 351605 CDS YP_001229337.1 148262631 5165028 646648..648261 1 NC_009483.1 hypothetical protein 648261 5165028 Gura_0550 Geobacter uraniireducens Rf4 hypothetical protein YP_001229337.1 646648 D 351605 CDS YP_001229338.1 148262632 5163675 complement(648468..651281) 1 NC_009483.1 PFAM: sigma-54 factor, interaction domain-containing protein; GAF domain protein; putative GAF sensor protein 651281 5163675 Gura_0551 Geobacter uraniireducens Rf4 putative GAF sensor protein YP_001229338.1 648468 R 351605 CDS YP_001229339.1 148262633 5163676 complement(651449..653302) 1 NC_009483.1 hypothetical protein 653302 5163676 Gura_0552 Geobacter uraniireducens Rf4 hypothetical protein YP_001229339.1 651449 R 351605 CDS YP_001229340.1 148262634 5163677 complement(653360..654115) 1 NC_009483.1 PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 654115 5163677 Gura_0553 Geobacter uraniireducens Rf4 beta-lactamase domain-containing protein YP_001229340.1 653360 R 351605 CDS YP_001229341.1 148262635 5163934 654954..655163 1 NC_009483.1 PFAM: protein of unknown function UPF0150; hypothetical protein 655163 5163934 Gura_0554 Geobacter uraniireducens Rf4 hypothetical protein YP_001229341.1 654954 D 351605 CDS YP_001229342.1 148262636 5163935 655160..655402 1 NC_009483.1 PFAM: YcfA family protein; hypothetical protein 655402 5163935 Gura_0555 Geobacter uraniireducens Rf4 hypothetical protein YP_001229342.1 655160 D 351605 CDS YP_001229343.1 148262637 5163936 655860..656687 1 NC_009483.1 hypothetical protein 656687 5163936 Gura_0556 Geobacter uraniireducens Rf4 hypothetical protein YP_001229343.1 655860 D 351605 CDS YP_001229344.1 148262638 5162715 656940..657470 1 NC_009483.1 hypothetical protein 657470 5162715 Gura_0557 Geobacter uraniireducens Rf4 hypothetical protein YP_001229344.1 656940 D 351605 CDS YP_001229345.1 148262639 5162716 complement(658178..658918) 1 NC_009483.1 PFAM: IstB domain protein ATP-binding protein; IstB ATP binding N-terminal domain protein; SMART: AAA ATPase; IstB ATP binding domain-containing protein 658918 5162716 Gura_0558 Geobacter uraniireducens Rf4 IstB ATP binding domain-containing protein YP_001229345.1 658178 R 351605 CDS YP_001229346.1 148262640 5162717 complement(658915..660468) 1 NC_009483.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 660468 5162717 Gura_0559 Geobacter uraniireducens Rf4 integrase catalytic subunit YP_001229346.1 658915 R 351605 CDS YP_001229347.1 148262641 5164226 660617..661381 1 NC_009483.1 PFAM: putative transposase; putative transposase 661381 5164226 Gura_0560 Geobacter uraniireducens Rf4 putative transposase YP_001229347.1 660617 D 351605 CDS YP_001229348.1 148262642 5164227 661998..663239 1 NC_009483.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 663239 5164227 Gura_0561 Geobacter uraniireducens Rf4 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001229348.1 661998 D 351605 CDS YP_001229349.1 148262643 5164228 663976..664266 1 NC_009483.1 hypothetical protein 664266 5164228 Gura_0562 Geobacter uraniireducens Rf4 hypothetical protein YP_001229349.1 663976 D 351605 CDS YP_001229350.1 148262644 5165243 664256..664594 1 NC_009483.1 hypothetical protein 664594 5165243 Gura_0563 Geobacter uraniireducens Rf4 hypothetical protein YP_001229350.1 664256 D 351605 CDS YP_001229351.1 148262645 5165244 664629..665042 1 NC_009483.1 hypothetical protein 665042 5165244 Gura_0564 Geobacter uraniireducens Rf4 hypothetical protein YP_001229351.1 664629 D 351605 CDS YP_001229352.1 148262646 5165743 666130..666456 1 NC_009483.1 hypothetical protein 666456 5165743 Gura_0567 Geobacter uraniireducens Rf4 hypothetical protein YP_001229352.1 666130 D 351605 CDS YP_001229353.1 148262647 5165744 666526..666954 1 NC_009483.1 hypothetical protein 666954 5165744 Gura_0568 Geobacter uraniireducens Rf4 hypothetical protein YP_001229353.1 666526 D 351605 CDS YP_001229354.1 148262648 5166203 666983..667270 1 NC_009483.1 PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 667270 5166203 Gura_0569 Geobacter uraniireducens Rf4 antibiotic biosynthesis monooxygenase YP_001229354.1 666983 D 351605 CDS YP_001229355.1 148262649 5166204 667301..667696 1 NC_009483.1 hypothetical protein 667696 5166204 Gura_0570 Geobacter uraniireducens Rf4 hypothetical protein YP_001229355.1 667301 D 351605 CDS YP_001229356.1 148262650 5166205 complement(667757..669268) 1 NC_009483.1 PFAM: protein of unknown function DUF195; hypothetical protein 669268 5166205 Gura_0571 Geobacter uraniireducens Rf4 hypothetical protein YP_001229356.1 667757 R 351605 CDS YP_001229357.1 148262651 5165715 complement(669302..670102) 1 NC_009483.1 PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 670102 5165715 Gura_0572 Geobacter uraniireducens Rf4 alpha/beta hydrolase fold protein YP_001229357.1 669302 R 351605 CDS YP_001229358.1 148262652 5165716 670510..675528 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 675528 5165716 Gura_0573 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001229358.1 670510 D 351605 CDS YP_001229359.1 148262653 5165717 675531..688832 1 NC_009483.1 PFAM: Fibronectin, type III domain protein; SMART: LamG domain protein jellyroll fold domain protein; fibronectin I domain-containing protein 688832 5165717 Gura_0574 Geobacter uraniireducens Rf4 fibronectin I domain-containing protein YP_001229359.1 675531 D 351605 CDS YP_001229360.1 148262654 5166844 689187..691196 1 NC_009483.1 hypothetical protein 691196 5166844 Gura_0575 Geobacter uraniireducens Rf4 hypothetical protein YP_001229360.1 689187 D 351605 CDS YP_001229361.1 148262655 5166845 691198..691992 1 NC_009483.1 hypothetical protein 691992 5166845 Gura_0576 Geobacter uraniireducens Rf4 hypothetical protein YP_001229361.1 691198 D 351605 CDS YP_001229362.1 148262656 5166846 complement(692257..692661) 1 NC_009483.1 PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ 692661 5166846 Gura_0577 Geobacter uraniireducens Rf4 type IV pilus assembly PilZ YP_001229362.1 692257 R 351605 CDS YP_001229363.1 148262657 5164259 complement(692778..694583) 1 NC_009483.1 TIGRFAM: exodeoxyribonuclease V, alpha subunit; exodeoxyribonuclease V subunit alpha 694583 5164259 Gura_0578 Geobacter uraniireducens Rf4 exodeoxyribonuclease V subunit alpha YP_001229363.1 692778 R 351605 CDS YP_001229364.1 148262658 5164260 complement(694745..698002) 1 NC_009483.1 TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; exodeoxyribonuclease V subunit beta 698002 5164260 Gura_0579 Geobacter uraniireducens Rf4 exodeoxyribonuclease V subunit beta YP_001229364.1 694745 R 351605 CDS YP_001229365.1 148262659 5164261 complement(698148..698372) 1 NC_009483.1 hypothetical protein 698372 5164261 Gura_0580 Geobacter uraniireducens Rf4 hypothetical protein YP_001229365.1 698148 R 351605 CDS YP_001229366.1 148262660 5164708 complement(698362..698622) 1 NC_009483.1 PFAM: protein of unknown function DUF497; hypothetical protein 698622 5164708 Gura_0581 Geobacter uraniireducens Rf4 hypothetical protein YP_001229366.1 698362 R 351605 CDS YP_001229367.1 148262661 5164709 complement(698679..701954) 1 NC_009483.1 TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V, RecC subunit; exodeoxyribonuclease V subunit gamma 701954 5164709 Gura_0582 Geobacter uraniireducens Rf4 exodeoxyribonuclease V subunit gamma YP_001229367.1 698679 R 351605 CDS YP_001229368.1 148262662 5164710 complement(701989..703101) 1 NC_009483.1 TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; homoserine O-acetyltransferase 703101 5164710 Gura_0583 Geobacter uraniireducens Rf4 homoserine O-acetyltransferase YP_001229368.1 701989 R 351605 CDS YP_001229369.1 148262663 5162958 complement(703114..703431) 1 NC_009483.1 hypothetical protein 703431 5162958 Gura_0584 Geobacter uraniireducens Rf4 hypothetical protein YP_001229369.1 703114 R 351605 CDS YP_001229370.1 148262664 5162959 703493..703804 1 NC_009483.1 hypothetical protein 703804 5162959 Gura_0585 Geobacter uraniireducens Rf4 hypothetical protein YP_001229370.1 703493 D 351605 CDS YP_001229371.1 148262665 5162960 703788..704174 1 NC_009483.1 PFAM: HEPN domain protein; HEPN domain-containing protein 704174 5162960 Gura_0586 Geobacter uraniireducens Rf4 HEPN domain-containing protein YP_001229371.1 703788 D 351605 CDS YP_001229372.1 148262666 5165205 complement(704345..704515) 1 NC_009483.1 hypothetical protein 704515 5165205 Gura_0587 Geobacter uraniireducens Rf4 hypothetical protein YP_001229372.1 704345 R 351605 CDS YP_001229373.1 148262667 5165206 complement(704512..705375) 1 NC_009483.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; 2-hydroxy-3-oxopropionate reductase 705375 5165206 Gura_0588 Geobacter uraniireducens Rf4 2-hydroxy-3-oxopropionate reductase YP_001229373.1 704512 R 351605 CDS YP_001229374.1 148262668 5165207 complement(705409..706146) 1 NC_009483.1 hypothetical protein 706146 5165207 Gura_0589 Geobacter uraniireducens Rf4 hypothetical protein YP_001229374.1 705409 R 351605 CDS YP_001229375.1 148262669 5165392 complement(706106..706489) 1 NC_009483.1 hypothetical protein 706489 5165392 Gura_0590 Geobacter uraniireducens Rf4 hypothetical protein YP_001229375.1 706106 R 351605 CDS YP_001229376.1 148262670 5165393 complement(706786..707127) 1 NC_009483.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 707127 5165393 Gura_0591 Geobacter uraniireducens Rf4 XRE family transcriptional regulator YP_001229376.1 706786 R 351605 CDS YP_001229377.1 148262671 5165394 707242..710109 1 NC_009483.1 PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases-like; helicase domain-containing protein 710109 5165394 Gura_0592 Geobacter uraniireducens Rf4 helicase domain-containing protein YP_001229377.1 707242 D 351605 CDS YP_001229378.1 148262672 5165241 710157..713378 1 NC_009483.1 PFAM: DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 713378 5165241 Gura_0593 Geobacter uraniireducens Rf4 DNA methylase N-4/N-6 domain-containing protein YP_001229378.1 710157 D 351605 CDS YP_001229379.1 148262673 5165242 713383..716673 1 NC_009483.1 hypothetical protein 716673 5165242 Gura_0594 Geobacter uraniireducens Rf4 hypothetical protein YP_001229379.1 713383 D 351605 CDS YP_001229380.1 148262674 5163326 complement(716800..717216) 1 NC_009483.1 PFAM: PilT protein domain protein; PilT domain-containing protein 717216 5163326 Gura_0595 Geobacter uraniireducens Rf4 PilT domain-containing protein YP_001229380.1 716800 R 351605 CDS YP_001229381.1 148262675 5163327 complement(717206..717436) 1 NC_009483.1 hypothetical protein 717436 5163327 Gura_0596 Geobacter uraniireducens Rf4 hypothetical protein YP_001229381.1 717206 R 351605 CDS YP_001229382.1 148262676 5163328 718655..720193 1 NC_009483.1 PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 720193 5163328 Gura_0597 Geobacter uraniireducens Rf4 filamentation induced by cAMP protein fic YP_001229382.1 718655 D 351605 CDS YP_001229383.1 148262677 5163138 720376..723072 1 NC_009483.1 PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases-like; non-specific serine/threonine protein kinase 723072 5163138 Gura_0598 Geobacter uraniireducens Rf4 non-specific serine/threonine protein kinase YP_001229383.1 720376 D 351605 CDS YP_001229384.1 148262678 5163139 723431..724573 1 NC_009483.1 ATPase AAA 724573 5163139 Gura_0599 Geobacter uraniireducens Rf4 ATPase AAA YP_001229384.1 723431 D 351605 CDS YP_001229385.1 148262679 5163140 complement(725017..725229) 1 NC_009483.1 PFAM: protein of unknown function UPF0150; hypothetical protein 725229 5163140 Gura_0600 Geobacter uraniireducens Rf4 hypothetical protein YP_001229385.1 725017 R 351605 CDS YP_001229386.1 148262680 5163850 complement(725232..725402) 1 NC_009483.1 PFAM: YcfA family protein; hypothetical protein 725402 5163850 Gura_0601 Geobacter uraniireducens Rf4 hypothetical protein YP_001229386.1 725232 R 351605 CDS YP_001229387.1 148262681 5163851 725576..725989 1 NC_009483.1 hypothetical protein 725989 5163851 Gura_0602 Geobacter uraniireducens Rf4 hypothetical protein YP_001229387.1 725576 D 351605 CDS YP_001229388.1 148262682 5163852 726169..726627 1 NC_009483.1 PFAM: Activator of Hsp90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein 726627 5163852 Gura_0603 Geobacter uraniireducens Rf4 activator of Hsp90 ATPase 1 family protein YP_001229388.1 726169 D 351605 CDS YP_001229389.1 148262683 5165841 726859..727275 1 NC_009483.1 hypothetical protein 727275 5165841 Gura_0604 Geobacter uraniireducens Rf4 hypothetical protein YP_001229389.1 726859 D 351605 CDS YP_001229390.1 148262684 5165842 727272..727514 1 NC_009483.1 hypothetical protein 727514 5165842 Gura_0605 Geobacter uraniireducens Rf4 hypothetical protein YP_001229390.1 727272 D 351605 CDS YP_001229391.1 148262685 5165843 727560..728639 1 NC_009483.1 PFAM: zinc finger, SWIM domain protein; zinc finger SWIM domain-containing protein 728639 5165843 Gura_0606 Geobacter uraniireducens Rf4 zinc finger SWIM domain-containing protein YP_001229391.1 727560 D 351605 CDS YP_001229392.1 148262686 5163970 complement(728869..730593) 1 NC_009483.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; para-aminobenzoate synthase subunit I 730593 5163970 Gura_0607 Geobacter uraniireducens Rf4 para-aminobenzoate synthase subunit I YP_001229392.1 728869 R 351605 CDS YP_001229393.1 148262687 5163971 complement(730596..731453) 1 NC_009483.1 hypothetical protein 731453 5163971 Gura_0608 Geobacter uraniireducens Rf4 hypothetical protein YP_001229393.1 730596 R 351605 CDS YP_001229394.1 148262688 5163972 731548..731919 1 NC_009483.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 731919 5163972 Gura_0609 Geobacter uraniireducens Rf4 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001229394.1 731548 D 351605 CDS YP_001229395.1 148262689 5164623 complement(732030..732497) 1 NC_009483.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 732497 5164623 Gura_0610 Geobacter uraniireducens Rf4 D-tyrosyl-tRNA(Tyr) deacylase YP_001229395.1 732030 R 351605 CDS YP_001229396.1 148262690 5164624 complement(732494..733012) 1 NC_009483.1 PFAM: Appr-1-p processing domain protein; appr-1-p processing domain-containing protein 733012 5164624 Gura_0611 Geobacter uraniireducens Rf4 appr-1-p processing domain-containing protein YP_001229396.1 732494 R 351605 CDS YP_001229397.1 148262691 5164625 733461..735092 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 735092 5164625 Gura_0612 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001229397.1 733461 D 351605 CDS YP_001229398.1 148262692 5163361 complement(735125..735466) 1 NC_009483.1 hypothetical protein 735466 5163361 Gura_0613 Geobacter uraniireducens Rf4 hypothetical protein YP_001229398.1 735125 R 351605 CDS YP_001229399.1 148262693 5163362 complement(735468..735749) 1 NC_009483.1 hypothetical protein 735749 5163362 Gura_0614 Geobacter uraniireducens Rf4 hypothetical protein YP_001229399.1 735468 R 351605 CDS YP_001229400.1 148262694 5163363 complement(735896..737128) 1 NC_009483.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 737128 5163363 Gura_0615 Geobacter uraniireducens Rf4 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001229400.1 735896 R 351605 CDS YP_001229401.1 148262695 5163191 complement(737128..737721) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 737721 5163191 Gura_0616 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001229401.1 737128 R 351605 CDS YP_001229402.1 148262696 5163192 complement(738123..738995) 1 NC_009483.1 CO dehydrogenase maturation factor-like protein 738995 5163192 Gura_0617 Geobacter uraniireducens Rf4 CO dehydrogenase maturation factor-like protein YP_001229402.1 738123 R 351605 CDS YP_001229403.1 148262697 5163193 complement(739010..740935) 1 NC_009483.1 TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; carbon-monoxide dehydrogenase, catalytic subunit 740935 5163193 Gura_0618 Geobacter uraniireducens Rf4 carbon-monoxide dehydrogenase, catalytic subunit YP_001229403.1 739010 R 351605 CDS YP_001229404.1 148262698 5164986 complement(741242..741946) 1 NC_009483.1 PFAM: LytTr DNA-binding region; response regulator receiver protein 741946 5164986 Gura_0619 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001229404.1 741242 R 351605 CDS YP_001229405.1 148262699 5164987 complement(742050..743732) 1 NC_009483.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; acetolactate synthase, large subunit type 743732 5164987 Gura_0620 Geobacter uraniireducens Rf4 acetolactate synthase, large subunit type YP_001229405.1 742050 R 351605 CDS YP_001229406.1 148262700 5164988 complement(744186..745904) 1 NC_009483.1 hypothetical protein 745904 5164988 Gura_0621 Geobacter uraniireducens Rf4 hypothetical protein YP_001229406.1 744186 R 351605 CDS YP_001229407.1 148262701 5165400 746242..747525 1 NC_009483.1 PFAM: regulatory protein, LuxR; response regulator receiver protein 747525 5165400 Gura_0622 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001229407.1 746242 D 351605 CDS YP_001229408.1 148262702 5165401 complement(747653..748099) 1 NC_009483.1 PFAM: Cupin 2, conserved barrel domain protein; cupin 2 domain-containing protein 748099 5165401 Gura_0623 Geobacter uraniireducens Rf4 cupin 2 domain-containing protein YP_001229408.1 747653 R 351605 CDS YP_001229409.1 148262703 5165402 complement(748173..749021) 1 NC_009483.1 PFAM: protein of unknown function DUF161; hypothetical protein 749021 5165402 Gura_0624 Geobacter uraniireducens Rf4 hypothetical protein YP_001229409.1 748173 R 351605 CDS YP_001229410.1 148262704 5166543 complement(749029..749529) 1 NC_009483.1 hypothetical protein 749529 5166543 Gura_0625 Geobacter uraniireducens Rf4 hypothetical protein YP_001229410.1 749029 R 351605 CDS YP_001229411.1 148262705 5166544 complement(749601..750401) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 750401 5166544 Gura_0626 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001229411.1 749601 R 351605 CDS YP_001229412.1 148262706 5166545 complement(750485..750991) 1 NC_009483.1 hypothetical protein 750991 5166545 Gura_0627 Geobacter uraniireducens Rf4 hypothetical protein YP_001229412.1 750485 R 351605 CDS YP_001229413.1 148262707 5165616 complement(751016..751822) 1 NC_009483.1 PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 751822 5165616 Gura_0628 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001229413.1 751016 R 351605 CDS YP_001229414.1 148262708 5165617 complement(751838..752260) 1 NC_009483.1 nucleic acid binding protein 752260 5165617 Gura_0629 Geobacter uraniireducens Rf4 nucleic acid binding protein YP_001229414.1 751838 R 351605 CDS YP_001229415.1 148262709 5165618 complement(752257..752550) 1 NC_009483.1 TIGRFAM: prevent-host-death family protein; prevent-host-death family protein 752550 5165618 Gura_0630 Geobacter uraniireducens Rf4 prevent-host-death family protein YP_001229415.1 752257 R 351605 CDS YP_001229416.1 148262710 5166402 complement(752792..754306) 1 NC_009483.1 ankyrin repeat-containing protein 754306 5166402 Gura_0631 Geobacter uraniireducens Rf4 ankyrin repeat-containing protein YP_001229416.1 752792 R 351605 CDS YP_001229417.1 148262711 5166403 complement(754528..755574) 1 NC_009483.1 PFAM: protein of unknown function UPF0118; hypothetical protein 755574 5166403 Gura_0632 Geobacter uraniireducens Rf4 hypothetical protein YP_001229417.1 754528 R 351605 CDS YP_001229418.1 148262712 5166404 complement(755578..756624) 1 NC_009483.1 PFAM: protein of unknown function UPF0118; hypothetical protein 756624 5166404 Gura_0633 Geobacter uraniireducens Rf4 hypothetical protein YP_001229418.1 755578 R 351605 CDS YP_001229419.1 148262713 5166983 complement(756681..757118) 1 NC_009483.1 hypothetical protein 757118 5166983 Gura_0634 Geobacter uraniireducens Rf4 hypothetical protein YP_001229419.1 756681 R 351605 CDS YP_001229420.1 148262714 5166984 757254..757979 1 NC_009483.1 PFAM: metallophosphoesterase; metallophosphoesterase 757979 5166984 Gura_0635 Geobacter uraniireducens Rf4 metallophosphoesterase YP_001229420.1 757254 D 351605 CDS YP_001229421.1 148262715 5166985 complement(757986..758219) 1 NC_009483.1 PFAM: protein of unknown function UPF0153; hypothetical protein 758219 5166985 Gura_0636 Geobacter uraniireducens Rf4 hypothetical protein YP_001229421.1 757986 R 351605 CDS YP_001229422.1 148262716 5163817 complement(758294..759643) 1 NC_009483.1 PFAM: penicillin-binding protein, transpeptidase; penicillin-binding protein, transpeptidase 759643 5163817 Gura_0637 Geobacter uraniireducens Rf4 penicillin-binding protein, transpeptidase YP_001229422.1 758294 R 351605 CDS YP_001229423.1 148262717 5163818 complement(759801..761150) 1 NC_009483.1 TIGRFAM: putative ribonuclease BN; PFAM: protein of unknown function UPF0074; ribonuclease BN; putative ribonuclease BN 761150 5163818 Gura_0638 Geobacter uraniireducens Rf4 putative ribonuclease BN YP_001229423.1 759801 R 351605 CDS YP_001229424.1 148262718 5163819 complement(761429..761743) 1 NC_009483.1 hypothetical protein 761743 5163819 Gura_0639 Geobacter uraniireducens Rf4 hypothetical protein YP_001229424.1 761429 R 351605 CDS YP_001229425.1 148262719 5162673 complement(761748..762137) 1 NC_009483.1 hypothetical protein 762137 5162673 Gura_0640 Geobacter uraniireducens Rf4 hypothetical protein YP_001229425.1 761748 R 351605 CDS YP_001229426.1 148262720 5162674 complement(762294..763160) 1 NC_009483.1 hypothetical protein 763160 5162674 Gura_0641 Geobacter uraniireducens Rf4 hypothetical protein YP_001229426.1 762294 R 351605 CDS YP_001229427.1 148262721 5162675 763466..765427 1 NC_009483.1 hypothetical protein 765427 5162675 Gura_0642 Geobacter uraniireducens Rf4 hypothetical protein YP_001229427.1 763466 D 351605 CDS YP_001229428.1 148262722 5163391 765525..765863 1 NC_009483.1 hypothetical protein 765863 5163391 Gura_0643 Geobacter uraniireducens Rf4 hypothetical protein YP_001229428.1 765525 D 351605 CDS YP_001229429.1 148262723 5163392 complement(765996..766628) 1 NC_009483.1 PFAM: multiple antibiotic resistance (MarC)-related protein; multiple antibiotic resistance (MarC)-like protein 766628 5163392 Gura_0644 Geobacter uraniireducens Rf4 multiple antibiotic resistance (MarC)-like protein YP_001229429.1 765996 R 351605 CDS YP_001229430.1 148262724 5165819 767599..769002 1 NC_009483.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 769002 5165819 Gura_0645 Geobacter uraniireducens Rf4 RNA-directed DNA polymerase YP_001229430.1 767599 D 351605 CDS YP_001229431.1 148262725 5165820 complement(769094..771139) 1 NC_009483.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 771139 hppA 5165820 hppA Geobacter uraniireducens Rf4 membrane-bound proton-translocating pyrophosphatase YP_001229431.1 769094 R 351605 CDS YP_001229432.1 148262726 5165821 771370..772629 1 NC_009483.1 hypothetical protein 772629 5165821 Gura_0647 Geobacter uraniireducens Rf4 hypothetical protein YP_001229432.1 771370 D 351605 CDS YP_001229433.1 148262727 5166346 772720..774099 1 NC_009483.1 PFAM: FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 774099 5166346 Gura_0648 Geobacter uraniireducens Rf4 FAD linked oxidase domain-containing protein YP_001229433.1 772720 D 351605 CDS YP_001229434.1 148262728 5166347 774201..775466 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 775466 5166347 Gura_0649 Geobacter uraniireducens Rf4 hypothetical protein YP_001229434.1 774201 D 351605 CDS YP_001229435.1 148262729 5166348 775634..776197 1 NC_009483.1 PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; XRE family transcriptional regulator 776197 5166348 Gura_0650 Geobacter uraniireducens Rf4 XRE family transcriptional regulator YP_001229435.1 775634 D 351605 CDS YP_001229436.1 148262730 5165568 776334..778058 1 NC_009483.1 PFAM: carboxyl transferase; propionyl-CoA carboxylase 778058 5165568 Gura_0651 Geobacter uraniireducens Rf4 propionyl-CoA carboxylase YP_001229436.1 776334 D 351605 CDS YP_001229437.1 148262731 5165569 778233..781121 1 NC_009483.1 PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; biotin/lipoyl attachment domain-containing protein 781121 5165569 Gura_0652 Geobacter uraniireducens Rf4 biotin/lipoyl attachment domain-containing protein YP_001229437.1 778233 D 351605 CDS YP_001229438.1 148262732 5165570 complement(781228..781437) 1 NC_009483.1 hypothetical protein 781437 5165570 Gura_0653 Geobacter uraniireducens Rf4 hypothetical protein YP_001229438.1 781228 R 351605 CDS YP_001229439.1 148262733 5163141 781975..783630 1 NC_009483.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase large subunit 783630 5163141 Gura_0654 Geobacter uraniireducens Rf4 methylmalonyl-CoA mutase large subunit YP_001229439.1 781975 D 351605 CDS YP_001229440.1 148262734 5163142 783698..784102 1 NC_009483.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 784102 5163142 Gura_0655 Geobacter uraniireducens Rf4 glyoxalase/bleomycin resistance protein/dioxygenase YP_001229440.1 783698 D 351605 CDS YP_001229441.1 148262735 5163143 784720..786108 1 NC_009483.1 hypothetical protein 786108 5163143 Gura_0656 Geobacter uraniireducens Rf4 hypothetical protein YP_001229441.1 784720 D 351605 CDS YP_001229442.1 148262736 5163194 786222..786509 1 NC_009483.1 hypothetical protein 786509 5163194 Gura_0657 Geobacter uraniireducens Rf4 hypothetical protein YP_001229442.1 786222 D 351605 CDS YP_001229443.1 148262737 5163195 786693..787106 1 NC_009483.1 PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 787106 5163195 Gura_0658 Geobacter uraniireducens Rf4 DNA polymerase subunit beta YP_001229443.1 786693 D 351605 CDS YP_001229444.1 148262738 5163196 787096..787518 1 NC_009483.1 PFAM: protein of unknown function DUF86; hypothetical protein 787518 5163196 Gura_0659 Geobacter uraniireducens Rf4 hypothetical protein YP_001229444.1 787096 D 351605 CDS YP_001229445.1 148262739 5165911 787734..789212 1 NC_009483.1 hypothetical protein 789212 5165911 Gura_0660 Geobacter uraniireducens Rf4 hypothetical protein YP_001229445.1 787734 D 351605 CDS YP_001229446.1 148262740 5165912 789381..790697 1 NC_009483.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 790697 hisZ 5165912 hisZ Geobacter uraniireducens Rf4 ATP phosphoribosyltransferase regulatory subunit YP_001229446.1 789381 D 351605 CDS YP_001229447.1 148262741 5165913 790708..792003 1 NC_009483.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 792003 5165913 Gura_0662 Geobacter uraniireducens Rf4 adenylosuccinate synthetase YP_001229447.1 790708 D 351605 CDS YP_001229448.2 161936190 5165824 792813..794438 1 NC_009483.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 794438 5165824 Gura_0663 Geobacter uraniireducens Rf4 hydroxylamine reductase YP_001229448.2 792813 D 351605 CDS YP_001229449.1 148262743 5165825 794539..795003 1 NC_009483.1 hypothetical protein 795003 5165825 Gura_0664 Geobacter uraniireducens Rf4 hypothetical protein YP_001229449.1 794539 D 351605 CDS YP_001229450.1 148262744 5166555 795032..796486 1 NC_009483.1 PFAM: cytochrome c552; nitrite reductase 796486 5166555 Gura_0665 Geobacter uraniireducens Rf4 nitrite reductase YP_001229450.1 795032 D 351605 CDS YP_001229451.1 148262745 5166556 796661..797185 1 NC_009483.1 PFAM: HPP family protein+B94; HPP family protein 797185 5166556 Gura_0666 Geobacter uraniireducens Rf4 HPP family protein YP_001229451.1 796661 D 351605 CDS YP_001229452.1 148262746 5166557 797346..798170 1 NC_009483.1 PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; OB-fold tRNA/helicase-type nucleic acid binding protein 798170 5166557 Gura_0667 Geobacter uraniireducens Rf4 OB-fold tRNA/helicase-type nucleic acid binding protein YP_001229452.1 797346 D 351605 CDS YP_001229453.1 148262747 5166712 798483..800588 1 NC_009483.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; putative adenylate/guanylate cyclase 800588 5166712 Gura_0668 Geobacter uraniireducens Rf4 putative adenylate/guanylate cyclase YP_001229453.1 798483 D 351605 CDS YP_001229454.1 148262748 5166713 800585..801055 1 NC_009483.1 hypothetical protein 801055 5166713 Gura_0669 Geobacter uraniireducens Rf4 hypothetical protein YP_001229454.1 800585 D 351605 CDS YP_001229455.1 148262749 5166714 801052..801918 1 NC_009483.1 PFAM: peptidase M48, Ste24p; peptidase M48, Ste24p 801918 5166714 Gura_0670 Geobacter uraniireducens Rf4 peptidase M48, Ste24p YP_001229455.1 801052 D 351605 CDS YP_001229456.1 148262750 5167013 801970..803244 1 NC_009483.1 PFAM: peptidase M48, Ste24p; Ste24 endopeptidase 803244 5167013 Gura_0671 Geobacter uraniireducens Rf4 Ste24 endopeptidase YP_001229456.1 801970 D 351605 CDS YP_001229457.1 148262751 5167014 803348..804757 1 NC_009483.1 hypothetical protein 804757 5167014 Gura_0672 Geobacter uraniireducens Rf4 hypothetical protein YP_001229457.1 803348 D 351605 CDS YP_001229458.1 148262752 5167015 complement(805165..806007) 1 NC_009483.1 hypothetical protein 806007 5167015 Gura_0673 Geobacter uraniireducens Rf4 hypothetical protein YP_001229458.1 805165 R 351605 CDS YP_001229459.1 148262753 5165315 complement(806004..806552) 1 NC_009483.1 hypothetical protein 806552 5165315 Gura_0674 Geobacter uraniireducens Rf4 hypothetical protein YP_001229459.1 806004 R 351605 CDS YP_001229460.1 148262754 5165316 complement(806549..807886) 1 NC_009483.1 TIGRFAM: general secretion pathway protein L; general secretion pathway protein L 807886 5165316 Gura_0675 Geobacter uraniireducens Rf4 general secretion pathway protein L YP_001229460.1 806549 R 351605 CDS YP_001229461.1 148262755 5165317 complement(807892..808797) 1 NC_009483.1 PFAM: General secretion pathway protein K; general secretion pathway protein K 808797 5165317 Gura_0676 Geobacter uraniireducens Rf4 general secretion pathway protein K YP_001229461.1 807892 R 351605 CDS YP_001229462.1 148262756 5163341 complement(808794..809366) 1 NC_009483.1 hypothetical protein 809366 5163341 Gura_0677 Geobacter uraniireducens Rf4 hypothetical protein YP_001229462.1 808794 R 351605 CDS YP_001229463.1 148262757 5163342 complement(809398..809733) 1 NC_009483.1 hypothetical protein 809733 5163342 Gura_0678 Geobacter uraniireducens Rf4 hypothetical protein YP_001229463.1 809398 R 351605 CDS YP_001229464.1 148262758 5162930 complement(809730..810317) 1 NC_009483.1 hypothetical protein 810317 5162930 Gura_0679 Geobacter uraniireducens Rf4 hypothetical protein YP_001229464.1 809730 R 351605 CDS YP_001229465.1 148262759 5162931 complement(810320..810763) 1 NC_009483.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; general secretion pathway protein G 810763 5162931 Gura_0680 Geobacter uraniireducens Rf4 general secretion pathway protein G YP_001229465.1 810320 R 351605 CDS YP_001229466.1 148262760 5162932 complement(810841..812052) 1 NC_009483.1 TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; general secretion pathway protein F 812052 5162932 Gura_0681 Geobacter uraniireducens Rf4 general secretion pathway protein F YP_001229466.1 810841 R 351605 CDS YP_001229467.1 148262761 5165061 complement(812033..813595) 1 NC_009483.1 TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase; general secretory pathway protein E 813595 5165061 Gura_0682 Geobacter uraniireducens Rf4 general secretory pathway protein E YP_001229467.1 812033 R 351605 CDS YP_001229468.1 148262762 5165062 complement(813614..815539) 1 NC_009483.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; general secretion pathway protein D 815539 5165062 Gura_0683 Geobacter uraniireducens Rf4 general secretion pathway protein D YP_001229468.1 813614 R 351605 CDS YP_001229469.1 148262763 5165063 complement(815660..816538) 1 NC_009483.1 Type II secretory pathway component PulC-like protein 816538 5165063 Gura_0684 Geobacter uraniireducens Rf4 Type II secretory pathway component PulC-like protein YP_001229469.1 815660 R 351605 CDS YP_001229470.1 148262764 5165371 816833..817552 1 NC_009483.1 PFAM: purine or other phosphorylase, family 1; purine phosphorylase family 1 817552 5165371 Gura_0685 Geobacter uraniireducens Rf4 purine phosphorylase family 1 YP_001229470.1 816833 D 351605 CDS YP_001229471.1 148262765 5165372 817594..818427 1 NC_009483.1 PFAM: protein of unknown function DUF191; hypothetical protein 818427 5165372 Gura_0686 Geobacter uraniireducens Rf4 hypothetical protein YP_001229471.1 817594 D 351605 CDS YP_001229472.1 148262766 5165373 818676..821420 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; putative PAS/PAC sensor protein 821420 5165373 Gura_0687 Geobacter uraniireducens Rf4 putative PAS/PAC sensor protein YP_001229472.1 818676 D 351605 CDS YP_001229473.1 148262767 5164594 821728..822153 1 NC_009483.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; rare lipoprotein A 822153 5164594 Gura_0688 Geobacter uraniireducens Rf4 rare lipoprotein A YP_001229473.1 821728 D 351605 CDS YP_001229474.1 148262768 5164595 complement(822257..824155) 1 NC_009483.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein 824155 5164595 Gura_0689 Geobacter uraniireducens Rf4 TPR repeat-containing protein YP_001229474.1 822257 R 351605 CDS YP_001229475.1 148262769 5164596 824449..824892 1 NC_009483.1 PFAM: heat shock protein Hsp20; heat shock protein Hsp20 824892 5164596 Gura_0690 Geobacter uraniireducens Rf4 heat shock protein Hsp20 YP_001229475.1 824449 D 351605 CDS YP_001229476.1 148262770 5164499 824904..827357 1 NC_009483.1 TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La 827357 5164499 Gura_0691 Geobacter uraniireducens Rf4 ATP-dependent protease La YP_001229476.1 824904 D 351605 CDS YP_001229477.1 148262771 5164500 827354..828337 1 NC_009483.1 TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; thiamine-monophosphate kinase 828337 5164500 Gura_0692 Geobacter uraniireducens Rf4 thiamine-monophosphate kinase YP_001229477.1 827354 D 351605 CDS YP_001229478.1 148262772 5164501 complement(828354..828755) 1 NC_009483.1 PFAM: protein of unknown function UPF0047; hypothetical protein 828755 5164501 Gura_0693 Geobacter uraniireducens Rf4 hypothetical protein YP_001229478.1 828354 R 351605 CDS YP_001229479.1 148262773 5165079 complement(828875..830206) 1 NC_009483.1 hypothetical protein 830206 5165079 Gura_0694 Geobacter uraniireducens Rf4 hypothetical protein YP_001229479.1 828875 R 351605 CDS YP_001229480.1 148262774 5165199 complement(831651..832892) 1 NC_009483.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 832892 5165199 Gura_0697 Geobacter uraniireducens Rf4 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001229480.1 831651 R 351605 CDS YP_001229481.1 148262775 5165200 833100..833783 1 NC_009483.1 hypothetical protein 833783 5165200 Gura_0698 Geobacter uraniireducens Rf4 hypothetical protein YP_001229481.1 833100 D 351605 CDS YP_001229482.1 148262776 5165201 833832..834947 1 NC_009483.1 PFAM: acyltransferase 3; acyltransferase 3 834947 5165201 Gura_0699 Geobacter uraniireducens Rf4 acyltransferase 3 YP_001229482.1 833832 D 351605 CDS YP_001229483.1 148262777 5166522 complement(834978..835370) 1 NC_009483.1 hypothetical protein 835370 5166522 Gura_0700 Geobacter uraniireducens Rf4 hypothetical protein YP_001229483.1 834978 R 351605 CDS YP_001229484.1 148262778 5166523 complement(835604..836047) 1 NC_009483.1 hypothetical protein 836047 5166523 Gura_0701 Geobacter uraniireducens Rf4 hypothetical protein YP_001229484.1 835604 R 351605 CDS YP_001229485.1 148262779 5166524 complement(836107..836586) 1 NC_009483.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; hypothetical protein 836586 5166524 Gura_0702 Geobacter uraniireducens Rf4 hypothetical protein YP_001229485.1 836107 R 351605 CDS YP_001229486.1 148262780 5163529 836776..837339 1 NC_009483.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 837339 5163529 Gura_0703 Geobacter uraniireducens Rf4 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_001229486.1 836776 D 351605 CDS YP_001229487.1 148262781 5163530 837425..837664 1 NC_009483.1 hypothetical protein 837664 5163530 Gura_0704 Geobacter uraniireducens Rf4 hypothetical protein YP_001229487.1 837425 D 351605 CDS YP_001229488.1 148262782 5163531 837692..838336 1 NC_009483.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; putative translaldolase 838336 5163531 Gura_0705 Geobacter uraniireducens Rf4 putative translaldolase YP_001229488.1 837692 D 351605 CDS YP_001229489.1 148262783 5163520 838933..840594 1 NC_009483.1 hypothetical protein 840594 5163520 Gura_0706 Geobacter uraniireducens Rf4 hypothetical protein YP_001229489.1 838933 D 351605 CDS YP_001229490.1 148262784 5163521 complement(840797..841429) 1 NC_009483.1 hypothetical protein 841429 5163521 Gura_0707 Geobacter uraniireducens Rf4 hypothetical protein YP_001229490.1 840797 R 351605 CDS YP_001229491.1 148262785 5163522 841534..843348 1 NC_009483.1 catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase 843348 5163522 Gura_0708 Geobacter uraniireducens Rf4 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase YP_001229491.1 841534 D 351605 CDS YP_001229492.1 148262786 5162882 843368..843781 1 NC_009483.1 hypothetical protein 843781 5162882 Gura_0709 Geobacter uraniireducens Rf4 hypothetical protein YP_001229492.1 843368 D 351605 CDS YP_001229493.1 148262787 5162883 843813..844487 1 NC_009483.1 PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; nitrite and sulfite reductase 4Fe-4S region 844487 5162883 Gura_0710 Geobacter uraniireducens Rf4 nitrite and sulfite reductase 4Fe-4S region YP_001229493.1 843813 D 351605 CDS YP_001229494.1 148262788 5162884 844575..845333 1 NC_009483.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 845333 5162884 Gura_0711 Geobacter uraniireducens Rf4 C32 tRNA thiolase YP_001229494.1 844575 D 351605 CDS YP_001229495.1 148262789 5165421 845685..846662 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 846662 5165421 Gura_0712 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001229495.1 845685 D 351605 CDS YP_001229496.1 148262790 5165422 complement(846758..847183) 1 NC_009483.1 PFAM: PilT protein domain protein; PilT domain-containing protein 847183 5165422 Gura_0713 Geobacter uraniireducens Rf4 PilT domain-containing protein YP_001229496.1 846758 R 351605 CDS YP_001229497.1 148262791 5165423 complement(847180..847461) 1 NC_009483.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein 847461 5165423 Gura_0714 Geobacter uraniireducens Rf4 prevent-host-death family protein YP_001229497.1 847180 R 351605 CDS YP_001229498.1 148262792 5162778 complement(847700..848119) 1 NC_009483.1 PFAM: zinc finger, DksA/TraR C4-type; TraR/DksA family transcriptional regulator 848119 5162778 Gura_0715 Geobacter uraniireducens Rf4 TraR/DksA family transcriptional regulator YP_001229498.1 847700 R 351605 CDS YP_001229499.1 148262793 5162779 complement(848231..849577) 1 NC_009483.1 TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying enzyme YliG 849577 5162779 Gura_0716 Geobacter uraniireducens Rf4 MiaB-like tRNA modifying enzyme YliG YP_001229499.1 848231 R 351605 CDS YP_001229500.1 148262794 5162780 complement(849691..850176) 1 NC_009483.1 putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein 850176 5162780 Gura_0717 Geobacter uraniireducens Rf4 putative nucleotide-binding protein YP_001229500.1 849691 R 351605 CDS YP_001229501.1 148262795 5165324 complement(850223..850948) 1 NC_009483.1 PFAM: outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 850948 5165324 Gura_0718 Geobacter uraniireducens Rf4 outer membrane lipoprotein carrier protein LolA YP_001229501.1 850223 R 351605 CDS YP_001229502.1 148262796 5165325 complement(851041..851874) 1 NC_009483.1 PFAM: outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 851874 5165325 Gura_0719 Geobacter uraniireducens Rf4 outer membrane lipoprotein carrier protein LolA YP_001229502.1 851041 R 351605 CDS YP_001229503.1 148262797 5165326 complement(851985..852593) 1 NC_009483.1 PFAM: CheC domain protein; CheC, inhibitor of MCP methylation 852593 5165326 Gura_0720 Geobacter uraniireducens Rf4 CheC, inhibitor of MCP methylation YP_001229503.1 851985 R 351605 CDS YP_001229504.1 148262798 5164605 complement(852623..854257) 1 NC_009483.1 PFAM: CheW domain protein; ATP-binding region, ATPase domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; CheA signal transduction histidine kinase 854257 5164605 Gura_0721 Geobacter uraniireducens Rf4 CheA signal transduction histidine kinase YP_001229504.1 852623 R 351605 CDS YP_001229505.1 148262799 5164606 complement(854261..854626) 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 854626 5164606 Gura_0722 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001229505.1 854261 R 351605 CDS YP_001229506.1 148262800 5164607 complement(854674..855102) 1 NC_009483.1 PFAM: CheW domain protein; putative CheW protein 855102 5164607 Gura_0723 Geobacter uraniireducens Rf4 putative CheW protein YP_001229506.1 854674 R 351605 CDS YP_001229507.1 148262801 5164396 complement(855099..856379) 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 856379 5164396 Gura_0724 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001229507.1 855099 R 351605 CDS YP_001229508.1 148262802 5164397 complement(856603..857478) 1 NC_009483.1 PFAM: MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase 857478 5164397 Gura_0725 Geobacter uraniireducens Rf4 protein-glutamate O-methyltransferase YP_001229508.1 856603 R 351605 CDS YP_001229509.1 148262803 5164398 complement(857721..858059) 1 NC_009483.1 PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ 858059 5164398 Gura_0726 Geobacter uraniireducens Rf4 type IV pilus assembly PilZ YP_001229509.1 857721 R 351605 CDS YP_001229510.1 148262804 5165560 complement(858203..858925) 1 NC_009483.1 PFAM: transport-associated protein; transport-associated protein 858925 5165560 Gura_0727 Geobacter uraniireducens Rf4 transport-associated protein YP_001229510.1 858203 R 351605 CDS YP_001229511.1 148262805 5165561 complement(859087..859524) 1 NC_009483.1 hypothetical protein 859524 5165561 Gura_0728 Geobacter uraniireducens Rf4 hypothetical protein YP_001229511.1 859087 R 351605 CDS YP_001229512.1 148262806 5165537 complement(859903..860271) 1 NC_009483.1 hypothetical protein 860271 5165537 Gura_0729 Geobacter uraniireducens Rf4 hypothetical protein YP_001229512.1 859903 R 351605 CDS YP_001229513.1 148262807 5165538 complement(860252..861556) 1 NC_009483.1 PFAM: aminotransferase, class I and II; aminotransferase 861556 5165538 Gura_0730 Geobacter uraniireducens Rf4 aminotransferase YP_001229513.1 860252 R 351605 CDS YP_001229514.1 148262808 5165539 complement(861787..862401) 1 NC_009483.1 hypothetical protein 862401 5165539 Gura_0731 Geobacter uraniireducens Rf4 hypothetical protein YP_001229514.1 861787 R 351605 CDS YP_001229515.1 148262809 5166772 complement(862408..862872) 1 NC_009483.1 hypothetical protein 862872 5166772 Gura_0732 Geobacter uraniireducens Rf4 hypothetical protein YP_001229515.1 862408 R 351605 CDS YP_001229516.1 148262810 5166773 complement(863006..863359) 1 NC_009483.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 863359 5166773 Gura_0733 Geobacter uraniireducens Rf4 glyoxalase/bleomycin resistance protein/dioxygenase YP_001229516.1 863006 R 351605 CDS YP_001229517.1 148262811 5166774 863526..865151 1 NC_009483.1 acetyl-CoA acetyltransferase-like protein 865151 5166774 Gura_0734 Geobacter uraniireducens Rf4 acetyl-CoA acetyltransferase-like protein YP_001229517.1 863526 D 351605 CDS YP_001229518.1 148262812 5166364 865175..865468 1 NC_009483.1 transcriptional regulator 865468 5166364 Gura_0735 Geobacter uraniireducens Rf4 transcriptional regulator YP_001229518.1 865175 D 351605 CDS YP_001229519.1 148262813 5166365 865782..867020 1 NC_009483.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase 867020 5166365 Gura_0736 Geobacter uraniireducens Rf4 diguanylate cyclase YP_001229519.1 865782 D 351605 CDS YP_001229520.1 148262814 5166366 867229..869163 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; integral membrane sensor signal transduction histidine kinase 869163 5166366 Gura_0737 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001229520.1 867229 D 351605 CDS YP_001229521.1 148262815 5162810 869278..869961 1 NC_009483.1 PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; response regulator receiver protein 869961 5162810 Gura_0738 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001229521.1 869278 D 351605 CDS YP_001229522.1 148262816 5162811 870137..871747 1 NC_009483.1 PFAM: Cna B domain protein; Cna B domain-containing protein 871747 5162811 Gura_0739 Geobacter uraniireducens Rf4 Cna B domain-containing protein YP_001229522.1 870137 D 351605 CDS YP_001229523.1 148262817 5162812 871760..872989 1 NC_009483.1 PFAM: Fibronectin, type III domain protein; protein of unknown function DUF1566; fibronectin I domain-containing protein 872989 5162812 Gura_0740 Geobacter uraniireducens Rf4 fibronectin I domain-containing protein YP_001229523.1 871760 D 351605 CDS YP_001229524.1 148262818 5166387 873179..874192 1 NC_009483.1 PFAM: protein of unknown function DUF1566; hypothetical protein 874192 5166387 Gura_0741 Geobacter uraniireducens Rf4 hypothetical protein YP_001229524.1 873179 D 351605 CDS YP_001229525.1 148262819 5166388 874212..875030 1 NC_009483.1 hypothetical protein 875030 5166388 Gura_0742 Geobacter uraniireducens Rf4 hypothetical protein YP_001229525.1 874212 D 351605 CDS YP_001229526.1 148262820 5163596 875426..877408 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; Diverse 7TM receptor, transmembrane region; histidine kinase, dimerisation and phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 877408 5163596 Gura_0744 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001229526.1 875426 D 351605 CDS YP_001229527.1 148262821 5163597 877398..878036 1 NC_009483.1 PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator 878036 5163597 Gura_0745 Geobacter uraniireducens Rf4 two component LuxR family transcriptional regulator YP_001229527.1 877398 D 351605 CDS YP_001229528.1 148262822 5163598 complement(878110..879300) 1 NC_009483.1 hypothetical protein 879300 5163598 Gura_0746 Geobacter uraniireducens Rf4 hypothetical protein YP_001229528.1 878110 R 351605 CDS YP_001229529.1 148262823 5164847 879664..883389 1 NC_009483.1 hypothetical protein 883389 5164847 Gura_0747 Geobacter uraniireducens Rf4 hypothetical protein YP_001229529.1 879664 D 351605 CDS YP_001229530.1 148262824 5164848 883430..884575 1 NC_009483.1 hypothetical protein 884575 5164848 Gura_0748 Geobacter uraniireducens Rf4 hypothetical protein YP_001229530.1 883430 D 351605 CDS YP_001229531.1 148262825 5164849 885248..886015 1 NC_009483.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 886015 5164849 Gura_0749 Geobacter uraniireducens Rf4 N-acetyltransferase GCN5 YP_001229531.1 885248 D 351605 CDS YP_001229532.1 148262826 5164399 886201..886710 1 NC_009483.1 hypothetical protein 886710 5164399 Gura_0750 Geobacter uraniireducens Rf4 hypothetical protein YP_001229532.1 886201 D 351605 CDS YP_001229533.1 148262827 5164400 886711..887031 1 NC_009483.1 hypothetical protein 887031 5164400 Gura_0751 Geobacter uraniireducens Rf4 hypothetical protein YP_001229533.1 886711 D 351605 CDS YP_001229534.1 148262828 5164401 887226..888086 1 NC_009483.1 hypothetical protein 888086 5164401 Gura_0752 Geobacter uraniireducens Rf4 hypothetical protein YP_001229534.1 887226 D 351605 CDS YP_001229535.1 148262829 5165476 888209..888457 1 NC_009483.1 PFAM: phage Tail Collar domain protein; phage tail collar domain-containing protein 888457 5165476 Gura_0753 Geobacter uraniireducens Rf4 phage tail collar domain-containing protein YP_001229535.1 888209 D 351605 CDS YP_001229536.1 148262830 5165477 888512..888754 1 NC_009483.1 PFAM: phage Tail Collar domain protein; phage tail collar domain-containing protein 888754 5165477 Gura_0754 Geobacter uraniireducens Rf4 phage tail collar domain-containing protein YP_001229536.1 888512 D 351605 CDS YP_001229537.1 148262831 5165478 888800..889834 1 NC_009483.1 PFAM: coagulation factor 5/8 type domain protein; coagulation factor 5/8 type domain-containing protein 889834 5165478 Gura_0755 Geobacter uraniireducens Rf4 coagulation factor 5/8 type domain-containing protein YP_001229537.1 888800 D 351605 CDS YP_001229538.1 148262832 5164362 890030..896158 1 NC_009483.1 TIGRFAM: polymorphic outer membrane protein; PFAM: cell surface receptor IPT/TIG domain protein; Polymorphic membrane protein, Chlamydia; Fibronectin, type III domain protein; polymorphic outer membrane protein 896158 5164362 Gura_0756 Geobacter uraniireducens Rf4 polymorphic outer membrane protein YP_001229538.1 890030 D 351605 CDS YP_001229539.1 148262833 5164363 896200..897360 1 NC_009483.1 hypothetical protein 897360 5164363 Gura_0757 Geobacter uraniireducens Rf4 hypothetical protein YP_001229539.1 896200 D 351605 CDS YP_001229540.1 148262834 5164364 897780..898301 1 NC_009483.1 hypothetical protein 898301 5164364 Gura_0758 Geobacter uraniireducens Rf4 hypothetical protein YP_001229540.1 897780 D 351605 CDS YP_001229541.1 148262835 5163099 898593..899246 1 NC_009483.1 PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator 899246 5163099 Gura_0759 Geobacter uraniireducens Rf4 two component LuxR family transcriptional regulator YP_001229541.1 898593 D 351605 CDS YP_001229542.1 148262836 5163100 899254..901086 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, dimerisation and phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 901086 5163100 Gura_0760 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001229542.1 899254 D 351605 CDS YP_001229543.1 148262837 5163101 901363..904938 1 NC_009483.1 PFAM: pentapeptide repeat protein; glycosyl hydrolase, BNR repeat-containing protein; pentapeptide repeat-containing protein 904938 5163101 Gura_0761 Geobacter uraniireducens Rf4 pentapeptide repeat-containing protein YP_001229543.1 901363 D 351605 CDS YP_001229544.1 148262838 5166537 905116..909435 1 NC_009483.1 hypothetical protein 909435 5166537 Gura_0762 Geobacter uraniireducens Rf4 hypothetical protein YP_001229544.1 905116 D 351605 CDS YP_001229545.1 148262839 5166538 909556..910068 1 NC_009483.1 hypothetical protein 910068 5166538 Gura_0763 Geobacter uraniireducens Rf4 hypothetical protein YP_001229545.1 909556 D 351605 CDS YP_001229546.1 148262840 5162976 910216..910641 1 NC_009483.1 hypothetical protein 910641 5162976 Gura_0765 Geobacter uraniireducens Rf4 hypothetical protein YP_001229546.1 910216 D 351605 CDS YP_001229547.1 148262841 5162977 910785..913787 1 NC_009483.1 PFAM: Tetratricopeptide TPR_4; hypothetical protein 913787 5162977 Gura_0766 Geobacter uraniireducens Rf4 hypothetical protein YP_001229547.1 910785 D 351605 CDS YP_001229548.1 148262842 5162978 913903..919317 1 NC_009483.1 hypothetical protein 919317 5162978 Gura_0767 Geobacter uraniireducens Rf4 hypothetical protein YP_001229548.1 913903 D 351605 CDS YP_001229549.1 148262843 5165130 919473..920630 1 NC_009483.1 hypothetical protein 920630 5165130 Gura_0768 Geobacter uraniireducens Rf4 hypothetical protein YP_001229549.1 919473 D 351605 CDS YP_001229550.1 148262844 5165131 920868..921083 1 NC_009483.1 hypothetical protein 921083 5165131 Gura_0769 Geobacter uraniireducens Rf4 hypothetical protein YP_001229550.1 920868 D 351605 CDS YP_001229551.1 148262845 5165132 921146..921601 1 NC_009483.1 hypothetical protein 921601 5165132 Gura_0770 Geobacter uraniireducens Rf4 hypothetical protein YP_001229551.1 921146 D 351605 CDS YP_001229552.1 148262846 5163114 921604..922161 1 NC_009483.1 PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin HHE cation binding domain-containing protein 922161 5163114 Gura_0771 Geobacter uraniireducens Rf4 hemerythrin HHE cation binding domain-containing protein YP_001229552.1 921604 D 351605 CDS YP_001229553.1 148262847 5163115 complement(922158..922577) 1 NC_009483.1 Inhibits transcription at high concentrations of nickel; nickel responsive regulator 922577 5163115 Gura_0772 Geobacter uraniireducens Rf4 nickel responsive regulator YP_001229553.1 922158 R 351605 CDS YP_001229554.1 148262848 5163116 complement(922840..923595) 1 NC_009483.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; TonB family protein 923595 5163116 Gura_0773 Geobacter uraniireducens Rf4 TonB family protein YP_001229554.1 922840 R 351605 CDS YP_001229555.1 148262849 5164800 complement(923612..927583) 1 NC_009483.1 PFAM: CobN/magnesium chelatase; cobaltochelatase 927583 5164800 Gura_0774 Geobacter uraniireducens Rf4 cobaltochelatase YP_001229555.1 923612 R 351605 CDS YP_001229556.1 148262850 5164801 complement(927570..927908) 1 NC_009483.1 hypothetical protein 927908 5164801 Gura_0775 Geobacter uraniireducens Rf4 hypothetical protein YP_001229556.1 927570 R 351605 CDS YP_001229557.1 148262851 5164802 complement(927895..928491) 1 NC_009483.1 biopolymer transport protein-like protein 928491 5164802 Gura_0776 Geobacter uraniireducens Rf4 biopolymer transport protein-like protein YP_001229557.1 927895 R 351605 CDS YP_001229558.1 148262852 5163727 complement(928488..929183) 1 NC_009483.1 hypothetical protein 929183 5163727 Gura_0777 Geobacter uraniireducens Rf4 hypothetical protein YP_001229558.1 928488 R 351605 CDS YP_001229559.1 148262853 5163728 complement(929197..931425) 1 NC_009483.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor 931425 5163728 Gura_0778 Geobacter uraniireducens Rf4 TonB-dependent receptor YP_001229559.1 929197 R 351605 CDS YP_001229560.1 148262854 5166590 complement(932031..933434) 1 NC_009483.1 PFAM: Carbohydrate-selective porin OprB; carbohydrate-selective porin OprB 933434 5166590 Gura_0779 Geobacter uraniireducens Rf4 carbohydrate-selective porin OprB YP_001229560.1 932031 R 351605 CDS YP_001229561.1 148262855 5163570 complement(933508..934554) 1 NC_009483.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; cobalamin (vitamin B12) biosynthesis CbiM protein 934554 5163570 Gura_0780 Geobacter uraniireducens Rf4 cobalamin (vitamin B12) biosynthesis CbiM protein YP_001229561.1 933508 R 351605 CDS YP_001229562.1 148262856 5163571 934808..935989 1 NC_009483.1 PFAM: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 935989 5163571 Gura_0781 Geobacter uraniireducens Rf4 Sel1 domain-containing protein YP_001229562.1 934808 D 351605 CDS YP_001229563.1 148262857 5163572 complement(936065..936490) 1 NC_009483.1 PFAM: thioesterase superfamily protein; thioesterase superfamily protein 936490 5163572 Gura_0782 Geobacter uraniireducens Rf4 thioesterase superfamily protein YP_001229563.1 936065 R 351605 CDS YP_001229564.1 148262858 5165277 complement(936621..937232) 1 NC_009483.1 hypothetical protein 937232 5165277 Gura_0783 Geobacter uraniireducens Rf4 hypothetical protein YP_001229564.1 936621 R 351605 CDS YP_001229565.1 148262859 5165278 complement(937489..938325) 1 NC_009483.1 PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein 938325 5165278 Gura_0784 Geobacter uraniireducens Rf4 helix-turn-helix domain-containing protein YP_001229565.1 937489 R 351605 CDS YP_001229566.1 148262860 5165279 938440..939243 1 NC_009483.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 939243 5165279 Gura_0785 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001229566.1 938440 D 351605 CDS YP_001229567.1 148262861 5164080 939563..939874 1 NC_009483.1 PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 939874 5164080 Gura_0786 Geobacter uraniireducens Rf4 helix-turn-helix domain-containing protein YP_001229567.1 939563 D 351605 CDS YP_001229568.1 148262862 5164081 complement(940066..940314) 1 NC_009483.1 PFAM: CopG domain protein DNA-binding domain protein; CopG/DNA-binding domain-containing protein 940314 5164081 Gura_0787 Geobacter uraniireducens Rf4 CopG/DNA-binding domain-containing protein YP_001229568.1 940066 R 351605 CDS YP_001229569.1 148262863 5164082 complement(940304..940570) 1 NC_009483.1 PFAM: protein of unknown function DUF497; hypothetical protein 940570 5164082 Gura_0788 Geobacter uraniireducens Rf4 hypothetical protein YP_001229569.1 940304 R 351605 CDS YP_001229570.1 148262864 5165297 complement(940606..941844) 1 NC_009483.1 PFAM: major facilitator superfamily MFS_1; major facilitator transporter 941844 5165297 Gura_0789 Geobacter uraniireducens Rf4 major facilitator transporter YP_001229570.1 940606 R 351605 CDS YP_001229571.1 148262865 5165298 complement(942134..943216) 1 NC_009483.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; ribosome small subunit-dependent GTPase A 943216 5165298 Gura_0790 Geobacter uraniireducens Rf4 ribosome small subunit-dependent GTPase A YP_001229571.1 942134 R 351605 CDS YP_001229572.1 148262866 5165299 complement(943324..943935) 1 NC_009483.1 hypothetical protein 943935 5165299 Gura_0791 Geobacter uraniireducens Rf4 hypothetical protein YP_001229572.1 943324 R 351605 CDS YP_001229573.1 148262867 5166884 complement(944024..945457) 1 NC_009483.1 hypothetical protein 945457 5166884 Gura_0792 Geobacter uraniireducens Rf4 hypothetical protein YP_001229573.1 944024 R 351605 CDS YP_001229574.1 148262868 5166885 complement(945580..946524) 1 NC_009483.1 PFAM: protein of unknown function DUF1568; SMART: Chromosomal replication initiator, DnaA C-terminal domain; hypothetical protein 946524 5166885 Gura_0793 Geobacter uraniireducens Rf4 hypothetical protein YP_001229574.1 945580 R 351605 CDS YP_001229575.1 148262869 5166886 complement(946894..948234) 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 948234 5166886 Gura_0794 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001229575.1 946894 R 351605 CDS YP_001229576.1 148262870 5166281 complement(948299..948646) 1 NC_009483.1 hypothetical protein 948646 5166281 Gura_0795 Geobacter uraniireducens Rf4 hypothetical protein YP_001229576.1 948299 R 351605 CDS YP_001229577.1 148262871 5166282 complement(948819..949388) 1 NC_009483.1 hypothetical protein 949388 5166282 Gura_0796 Geobacter uraniireducens Rf4 hypothetical protein YP_001229577.1 948819 R 351605 CDS YP_001229578.1 148262872 5166283 complement(949648..953070) 1 NC_009483.1 hypothetical protein 953070 5166283 Gura_0797 Geobacter uraniireducens Rf4 hypothetical protein YP_001229578.1 949648 R 351605 CDS YP_001229579.1 148262873 5164106 complement(953535..954458) 1 NC_009483.1 hypothetical protein 954458 5164106 Gura_0798 Geobacter uraniireducens Rf4 hypothetical protein YP_001229579.1 953535 R 351605 CDS YP_001229580.1 148262874 5164107 complement(954500..954913) 1 NC_009483.1 hypothetical protein 954913 5164107 Gura_0799 Geobacter uraniireducens Rf4 hypothetical protein YP_001229580.1 954500 R 351605 CDS YP_001229581.1 148262875 5164108 complement(955097..956020) 1 NC_009483.1 hypothetical protein 956020 5164108 Gura_0800 Geobacter uraniireducens Rf4 hypothetical protein YP_001229581.1 955097 R 351605 CDS YP_001229582.1 148262876 5166278 complement(956500..958296) 1 NC_009483.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 958296 5166278 Gura_0801 Geobacter uraniireducens Rf4 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_001229582.1 956500 R 351605 CDS YP_001229583.1 148262877 5166279 complement(958639..959070) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 959070 5166279 Gura_0802 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001229583.1 958639 R 351605 CDS YP_001229584.1 148262878 5166280 complement(959083..960162) 1 NC_009483.1 PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; NADH dehydrogenase (quinone) 960162 5166280 Gura_0803 Geobacter uraniireducens Rf4 NADH dehydrogenase (quinone) YP_001229584.1 959083 R 351605 CDS YP_001229585.1 148262879 5165333 complement(960167..960577) 1 NC_009483.1 hypothetical protein 960577 5165333 Gura_0804 Geobacter uraniireducens Rf4 hypothetical protein YP_001229585.1 960167 R 351605 CDS YP_001229586.1 148262880 5165334 complement(960776..962857) 1 NC_009483.1 TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycogen debranching protein GlgX 962857 5165334 Gura_0805 Geobacter uraniireducens Rf4 glycogen debranching protein GlgX YP_001229586.1 960776 R 351605 CDS YP_001229587.1 148262881 5165335 complement(962876..964525) 1 NC_009483.1 PFAM: MscS Mechanosensitive ion channel; mechanosensitive ion channel MscS 964525 5165335 Gura_0806 Geobacter uraniireducens Rf4 mechanosensitive ion channel MscS YP_001229587.1 962876 R 351605 CDS YP_001229588.1 148262882 5163532 complement(965384..965773) 1 NC_009483.1 hypothetical protein 965773 5163532 Gura_0807 Geobacter uraniireducens Rf4 hypothetical protein YP_001229588.1 965384 R 351605 CDS YP_001229589.1 148262883 5163533 complement(965807..966496) 1 NC_009483.1 PFAM: Paraquat-inducible protein A; paraquat-inducible protein A 966496 5163533 Gura_0808 Geobacter uraniireducens Rf4 paraquat-inducible protein A YP_001229589.1 965807 R 351605 CDS YP_001229590.1 148262884 5163534 complement(966559..967320) 1 NC_009483.1 hypothetical protein 967320 5163534 Gura_0809 Geobacter uraniireducens Rf4 hypothetical protein YP_001229590.1 966559 R 351605 CDS YP_001229591.1 148262885 5162643 complement(967380..967538) 1 NC_009483.1 hypothetical protein 967538 5162643 Gura_0810 Geobacter uraniireducens Rf4 hypothetical protein YP_001229591.1 967380 R 351605 CDS YP_001229592.1 148262886 5162644 complement(967677..967991) 1 NC_009483.1 hypothetical protein 967991 5162644 Gura_0811 Geobacter uraniireducens Rf4 hypothetical protein YP_001229592.1 967677 R 351605 CDS YP_001229593.1 148262887 5162645 complement(968096..968902) 1 NC_009483.1 PFAM: Carbohydrate-selective porin OprB; carbohydrate-selective porin OprB 968902 5162645 Gura_0812 Geobacter uraniireducens Rf4 carbohydrate-selective porin OprB YP_001229593.1 968096 R 351605 CDS YP_001229594.1 148262888 5162658 complement(968925..969446) 1 NC_009483.1 hypothetical protein 969446 5162658 Gura_0813 Geobacter uraniireducens Rf4 hypothetical protein YP_001229594.1 968925 R 351605 CDS YP_001229595.1 148262889 5162659 complement(970010..971392) 1 NC_009483.1 PFAM: outer membrane efflux protein; outer membrane efflux protein 971392 5162659 Gura_0814 Geobacter uraniireducens Rf4 outer membrane efflux protein YP_001229595.1 970010 R 351605 CDS YP_001229596.1 148262890 5162660 complement(971497..974607) 1 NC_009483.1 PFAM: acriflavin resistance protein; acriflavin resistance protein 974607 5162660 Gura_0815 Geobacter uraniireducens Rf4 acriflavin resistance protein YP_001229596.1 971497 R 351605 CDS YP_001229597.1 148262891 5163448 complement(974706..975863) 1 NC_009483.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 975863 5163448 Gura_0816 Geobacter uraniireducens Rf4 RND family efflux transporter MFP subunit YP_001229597.1 974706 R 351605 CDS YP_001229598.1 148262892 5163449 complement(975874..976512) 1 NC_009483.1 PFAM: regulatory protein, TetR; TetR family transcriptional regulator 976512 5163449 Gura_0817 Geobacter uraniireducens Rf4 TetR family transcriptional regulator YP_001229598.1 975874 R 351605 CDS YP_001229599.1 148262893 5163450 976684..977199 1 NC_009483.1 TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 977199 5163450 Gura_0818 Geobacter uraniireducens Rf4 peptide deformylase YP_001229599.1 976684 D 351605 CDS YP_001229600.1 148262894 5163750 977199..978140 1 NC_009483.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; methionyl-tRNA formyltransferase 978140 5163750 Gura_0819 Geobacter uraniireducens Rf4 methionyl-tRNA formyltransferase YP_001229600.1 977199 D 351605 CDS YP_001229601.1 148262895 5163751 978143..978913 1 NC_009483.1 PFAM: protein of unknown function DUF116; hypothetical protein 978913 5163751 Gura_0820 Geobacter uraniireducens Rf4 hypothetical protein YP_001229601.1 978143 D 351605 CDS YP_001229602.1 148262896 5163752 978941..979951 1 NC_009483.1 PFAM: polysaccharide deacetylase; polysaccharide deacetylase 979951 5163752 Gura_0821 Geobacter uraniireducens Rf4 polysaccharide deacetylase YP_001229602.1 978941 D 351605 CDS YP_001229603.1 148262897 5164494 979989..980912 1 NC_009483.1 TIGRFAM: cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; cysteine synthase 980912 5164494 Gura_0822 Geobacter uraniireducens Rf4 cysteine synthase YP_001229603.1 979989 D 351605 CDS YP_001229604.1 148262898 5164495 980947..981279 1 NC_009483.1 hypothetical protein 981279 5164495 Gura_0823 Geobacter uraniireducens Rf4 hypothetical protein YP_001229604.1 980947 D 351605 CDS YP_001229605.1 148262899 5165050 981288..982211 1 NC_009483.1 hypothetical protein 982211 5165050 Gura_0824 Geobacter uraniireducens Rf4 hypothetical protein YP_001229605.1 981288 D 351605 CDS YP_001229606.1 148262900 5165051 982488..983102 1 NC_009483.1 hypothetical protein 983102 5165051 Gura_0825 Geobacter uraniireducens Rf4 hypothetical protein YP_001229606.1 982488 D 351605 CDS YP_001229607.1 148262901 5165052 983284..985848 1 NC_009483.1 TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; SMART: DEAD-like helicases-like; CRISPR-associated helicase Cas3 985848 5165052 Gura_0826 Geobacter uraniireducens Rf4 CRISPR-associated helicase Cas3 YP_001229607.1 983284 D 351605 CDS YP_001229608.1 148262902 5165220 985845..987482 1 NC_009483.1 TIGRFAM: CRISPR-associated protein, Cse1 family; CRISPR-associated Cse1 family protein 987482 5165220 Gura_0827 Geobacter uraniireducens Rf4 CRISPR-associated Cse1 family protein YP_001229608.1 985845 D 351605 CDS YP_001229609.1 148262903 5165221 987479..987970 1 NC_009483.1 hypothetical protein 987970 5165221 Gura_0828 Geobacter uraniireducens Rf4 hypothetical protein YP_001229609.1 987479 D 351605 CDS YP_001229610.1 148262904 5165222 987967..988656 1 NC_009483.1 TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR-associated protein, CT1974; CRISPR-associated Cse3 family protein 988656 5165222 Gura_0829 Geobacter uraniireducens Rf4 CRISPR-associated Cse3 family protein YP_001229610.1 987967 D 351605 CDS YP_001229611.1 148262905 5165905 988690..989916 1 NC_009483.1 TIGRFAM: CRISPR-associated protein, Cse4 family; CRISPR-associated Cse4 family protein 989916 5165905 Gura_0830 Geobacter uraniireducens Rf4 CRISPR-associated Cse4 family protein YP_001229611.1 988690 D 351605 CDS YP_001229612.1 148262906 5165906 989891..990586 1 NC_009483.1 TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; CRISPR-associated Cas5 family protein 990586 5165906 Gura_0831 Geobacter uraniireducens Rf4 CRISPR-associated Cas5 family protein YP_001229612.1 989891 D 351605 CDS YP_001229613.1 148262907 5165907 complement(990752..991093) 1 NC_009483.1 PFAM: PemK family protein; transcriptional modulator of MazE/toxin MazF 991093 5165907 Gura_0832 Geobacter uraniireducens Rf4 transcriptional modulator of MazE/toxin MazF YP_001229613.1 990752 R 351605 CDS YP_001229614.1 148262908 5166019 complement(991093..991410) 1 NC_009483.1 PFAM: CopG domain protein DNA-binding domain protein; CopG/DNA-binding domain-containing protein 991410 5166019 Gura_0833 Geobacter uraniireducens Rf4 CopG/DNA-binding domain-containing protein YP_001229614.1 991093 R 351605 CDS YP_001229615.1 148262909 5166020 991566..991934 1 NC_009483.1 PFAM: S23 ribosomal protein; S23 ribosomal protein 991934 5166020 Gura_0834 Geobacter uraniireducens Rf4 S23 ribosomal protein YP_001229615.1 991566 D 351605 CDS YP_001229616.1 148262910 5166021 992075..992998 1 NC_009483.1 TIGRFAM: CRISPR-associated protein Cas1; CRISPR-associated Cas1 family protein 992998 5166021 Gura_0835 Geobacter uraniireducens Rf4 CRISPR-associated Cas1 family protein YP_001229616.1 992075 D 351605 CDS YP_001229617.1 148262911 5166191 993182..994564 1 NC_009483.1 PFAM: transposase, IS4 family protein; transposase, IS4 family protein 994564 5166191 Gura_0836 Geobacter uraniireducens Rf4 transposase, IS4 family protein YP_001229617.1 993182 D 351605 CDS YP_001229618.1 148262912 5166192 994670..994978 1 NC_009483.1 TIGRFAM: CRISPR-associated protein Cas2; hypothetical protein 994978 5166192 Gura_0837 Geobacter uraniireducens Rf4 hypothetical protein YP_001229618.1 994670 D 351605 CDS YP_001229619.1 148262913 5166193 996868..997323 1 NC_009483.1 hypothetical protein 997323 5166193 Gura_0838 Geobacter uraniireducens Rf4 hypothetical protein YP_001229619.1 996868 D 351605 CDS YP_001229620.1 148262914 5167046 complement(997355..998152) 1 NC_009483.1 hypothetical protein 998152 5167046 Gura_0839 Geobacter uraniireducens Rf4 hypothetical protein YP_001229620.1 997355 R 351605 CDS YP_001229621.1 148262915 5167047 complement(998290..999699) 1 NC_009483.1 TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; mercuric reductase 999699 5167047 Gura_0840 Geobacter uraniireducens Rf4 mercuric reductase YP_001229621.1 998290 R 351605 CDS YP_001229622.1 148262916 5164502 1000165..1002204 1 NC_009483.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; transketolase 1002204 5164502 Gura_0841 Geobacter uraniireducens Rf4 transketolase YP_001229622.1 1000165 D 351605 CDS YP_001229623.1 148262917 5164503 complement(1002266..1002673) 1 NC_009483.1 PFAM: protein of unknown function UPF0150; HicB family protein; hypothetical protein 1002673 5164503 Gura_0842 Geobacter uraniireducens Rf4 hypothetical protein YP_001229623.1 1002266 R 351605 CDS YP_001229624.1 148262918 5164504 complement(1002670..1002924) 1 NC_009483.1 hypothetical protein 1002924 5164504 Gura_0843 Geobacter uraniireducens Rf4 hypothetical protein YP_001229624.1 1002670 R 351605 CDS YP_001229625.1 148262919 5164131 complement(1003482..1004486) 1 NC_009483.1 PFAM: protein of unknown function DUF1568; SMART: Chromosomal replication initiator, DnaA C-terminal domain; hypothetical protein 1004486 5164131 Gura_0845 Geobacter uraniireducens Rf4 hypothetical protein YP_001229625.1 1003482 R 351605 CDS YP_001229626.1 148262920 5164132 complement(1004530..1005213) 1 NC_009483.1 retron-type reverse transcriptase-like protein 1005213 5164132 Gura_0846 Geobacter uraniireducens Rf4 retron-type reverse transcriptase-like protein YP_001229626.1 1004530 R 351605 CDS YP_001229627.1 148262921 5165494 complement(1005974..1006744) 1 NC_009483.1 hypothetical protein 1006744 5165494 Gura_0847 Geobacter uraniireducens Rf4 hypothetical protein YP_001229627.1 1005974 R 351605 CDS YP_001229628.1 148262922 5165495 complement(1006967..1007452) 1 NC_009483.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 1007452 5165495 Gura_0848 Geobacter uraniireducens Rf4 3-demethylubiquinone-9 3-methyltransferase YP_001229628.1 1006967 R 351605 CDS YP_001229629.1 148262923 5165496 complement(1007828..1008919) 1 NC_009483.1 PFAM: putative transposase; putative transposase 1008919 5165496 Gura_0849 Geobacter uraniireducens Rf4 putative transposase YP_001229629.1 1007828 R 351605 CDS YP_001229630.1 148262924 5165266 1009478..1010167 1 NC_009483.1 PFAM: cyclic nucleotide-binding; regulatory protein, Crp; CRP/FNR family transcriptional regulator 1010167 5165266 Gura_0851 Geobacter uraniireducens Rf4 CRP/FNR family transcriptional regulator YP_001229630.1 1009478 D 351605 CDS YP_001229631.1 148262925 5165267 complement(1010139..1010699) 1 NC_009483.1 PFAM: protein of unknown function DUF523; hypothetical protein 1010699 5165267 Gura_0852 Geobacter uraniireducens Rf4 hypothetical protein YP_001229631.1 1010139 R 351605 CDS YP_001229632.1 148262926 5163669 1010978..1012609 1 NC_009483.1 PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; GAF sensor signal transduction histidine kinase 1012609 5163669 Gura_0853 Geobacter uraniireducens Rf4 GAF sensor signal transduction histidine kinase YP_001229632.1 1010978 D 351605 CDS YP_001229633.1 148262927 5163670 1012602..1012976 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 1012976 5163670 Gura_0854 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001229633.1 1012602 D 351605 CDS YP_001229634.1 148262928 5163671 1013079..1015586 1 NC_009483.1 PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; nucleotidyl transferase 1015586 5163671 Gura_0855 Geobacter uraniireducens Rf4 nucleotidyl transferase YP_001229634.1 1013079 D 351605 CDS YP_001229635.1 148262929 5166097 1015687..1017885 1 NC_009483.1 PFAM: glycoside hydrolase, family 57; glycoside hydrolase family protein 1017885 5166097 Gura_0856 Geobacter uraniireducens Rf4 glycoside hydrolase family protein YP_001229635.1 1015687 D 351605 CDS YP_001229636.1 148262930 5166098 1018084..1019109 1 NC_009483.1 TIGRFAM: galactose-1-phosphate uridylyltransferase; galactose-1-phosphate uridylyltransferase 1019109 5166098 Gura_0857 Geobacter uraniireducens Rf4 galactose-1-phosphate uridylyltransferase YP_001229636.1 1018084 D 351605 CDS YP_001229637.1 148262931 5166099 1019133..1020587 1 NC_009483.1 TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: glycosyl transferase, group 1; Starch synthase catalytic domain protein; glycogen/starch synthase 1020587 5166099 Gura_0858 Geobacter uraniireducens Rf4 glycogen/starch synthase YP_001229637.1 1019133 D 351605 CDS YP_001229638.1 148262932 5163744 1020594..1020743 1 NC_009483.1 hypothetical protein 1020743 5163744 Gura_0859 Geobacter uraniireducens Rf4 hypothetical protein YP_001229638.1 1020594 D 351605 CDS YP_001229639.1 148262933 5163745 1020799..1021053 1 NC_009483.1 hypothetical protein 1021053 5163745 Gura_0860 Geobacter uraniireducens Rf4 hypothetical protein YP_001229639.1 1020799 D 351605 CDS YP_001229640.1 148262934 5163746 complement(1021153..1022676) 1 NC_009483.1 hypothetical protein 1022676 5163746 Gura_0861 Geobacter uraniireducens Rf4 hypothetical protein YP_001229640.1 1021153 R 351605 CDS YP_001229641.1 148262935 5163338 1022940..1023413 1 NC_009483.1 hypothetical protein 1023413 5163338 Gura_0862 Geobacter uraniireducens Rf4 hypothetical protein YP_001229641.1 1022940 D 351605 CDS YP_001229642.1 148262936 5163339 1023410..1024195 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1024195 5163339 Gura_0863 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_001229642.1 1023410 D 351605 CDS YP_001229643.1 148262937 5163340 1024198..1025445 1 NC_009483.1 PFAM: Polysulphide reductase, NrfD; polysulfide reductase NrfD 1025445 5163340 Gura_0864 Geobacter uraniireducens Rf4 polysulfide reductase NrfD YP_001229643.1 1024198 D 351605 CDS YP_001229644.1 148262938 5163961 1025591..1027432 1 NC_009483.1 hypothetical protein 1027432 5163961 Gura_0865 Geobacter uraniireducens Rf4 hypothetical protein YP_001229644.1 1025591 D 351605 CDS YP_001229645.1 148262939 5163962 1027662..1028735 1 NC_009483.1 PFAM: aminotransferase, class V; alanine--glyoxylate transaminase 1028735 5163962 Gura_0866 Geobacter uraniireducens Rf4 alanine--glyoxylate transaminase YP_001229645.1 1027662 D 351605 CDS YP_001229646.1 148262940 5163963 1028784..1029512 1 NC_009483.1 hypothetical protein 1029512 5163963 Gura_0867 Geobacter uraniireducens Rf4 hypothetical protein YP_001229646.1 1028784 D 351605 CDS YP_001229647.1 148262941 5165461 1029664..1029840 1 NC_009483.1 hypothetical protein 1029840 5165461 Gura_0868 Geobacter uraniireducens Rf4 hypothetical protein YP_001229647.1 1029664 D 351605 CDS YP_001229648.1 148262942 5165462 complement(1029909..1030067) 1 NC_009483.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 1030067 5165462 Gura_0869 Geobacter uraniireducens Rf4 rubredoxin-type Fe(Cys)4 protein YP_001229648.1 1029909 R 351605 CDS YP_001229649.1 148262943 5165463 1030628..1032481 1 NC_009483.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 1032481 5165463 Gura_0870 Geobacter uraniireducens Rf4 phosphoenolpyruvate carboxykinase YP_001229649.1 1030628 D 351605 CDS YP_001229650.1 148262944 5165867 1032647..1034239 1 NC_009483.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 1034239 5165867 Gura_0871 Geobacter uraniireducens Rf4 phosphoenolpyruvate carboxykinase YP_001229650.1 1032647 D 351605 CDS YP_001229651.1 148262945 5165868 1034453..1035586 1 NC_009483.1 TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein; hydrogenase (NiFe) small subunit HydA 1035586 5165868 Gura_0872 Geobacter uraniireducens Rf4 hydrogenase (NiFe) small subunit HydA YP_001229651.1 1034453 D 351605 CDS YP_001229652.1 148262946 5163165 1035587..1037296 1 NC_009483.1 PFAM: nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase, large subunit 1037296 5163165 Gura_0873 Geobacter uraniireducens Rf4 nickel-dependent hydrogenase, large subunit YP_001229652.1 1035587 D 351605 CDS YP_001229653.1 148262947 5163166 1037307..1037975 1 NC_009483.1 TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; Ni/Fe-hydrogenase, b-type cytochrome subunit 1037975 5163166 Gura_0874 Geobacter uraniireducens Rf4 Ni/Fe-hydrogenase, b-type cytochrome subunit YP_001229653.1 1037307 D 351605 CDS YP_001229654.1 148262948 5163167 complement(1038130..1040016) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 1040016 5163167 Gura_0875 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001229654.1 1038130 R 351605 CDS YP_001229655.1 148262949 5162742 complement(1040188..1042317) 1 NC_009483.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 1042317 5162742 Gura_0876 Geobacter uraniireducens Rf4 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) YP_001229655.1 1040188 R 351605 CDS YP_001229656.1 148262950 5162743 1042626..1042817 1 NC_009483.1 hypothetical protein 1042817 5162743 Gura_0877 Geobacter uraniireducens Rf4 hypothetical protein YP_001229656.1 1042626 D 351605 CDS YP_001229657.1 148262951 5162744 complement(1042847..1043437) 1 NC_009483.1 PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; cupin 1043437 5162744 Gura_0878 Geobacter uraniireducens Rf4 cupin YP_001229657.1 1042847 R 351605 CDS YP_001229658.1 148262952 5162652 1043702..1045132 1 NC_009483.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 1045132 5162652 Gura_0879 Geobacter uraniireducens Rf4 protease Do YP_001229658.1 1043702 D 351605 CDS YP_001229659.1 148262953 5162653 1045190..1045453 1 NC_009483.1 hypothetical protein 1045453 5162653 Gura_0880 Geobacter uraniireducens Rf4 hypothetical protein YP_001229659.1 1045190 D 351605 CDS YP_001229660.1 148262954 5162654 1045534..1046496 1 NC_009483.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 1046496 5162654 Gura_0881 Geobacter uraniireducens Rf4 RluA family pseudouridine synthase YP_001229660.1 1045534 D 351605 CDS YP_001229661.1 148262955 5166182 1046578..1047381 1 NC_009483.1 PFAM: protein of unknown function DUF152; hypothetical protein 1047381 5166182 Gura_0882 Geobacter uraniireducens Rf4 hypothetical protein YP_001229661.1 1046578 D 351605 CDS YP_001229662.1 148262956 5166183 1047523..1048377 1 NC_009483.1 hypothetical protein 1048377 5166183 Gura_0883 Geobacter uraniireducens Rf4 hypothetical protein YP_001229662.1 1047523 D 351605 CDS YP_001229663.1 148262957 5166184 complement(1048466..1048798) 1 NC_009483.1 hypothetical protein 1048798 5166184 Gura_0884 Geobacter uraniireducens Rf4 hypothetical protein YP_001229663.1 1048466 R 351605 CDS YP_001229664.1 148262958 5162900 1049041..1050132 1 NC_009483.1 hypothetical protein 1050132 5162900 Gura_0885 Geobacter uraniireducens Rf4 hypothetical protein YP_001229664.1 1049041 D 351605 CDS YP_001229665.1 148262959 5162901 complement(1050143..1050934) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase, 20 kDa subunit 1050934 5162901 Gura_0886 Geobacter uraniireducens Rf4 NADH ubiquinone oxidoreductase, 20 kDa subunit YP_001229665.1 1050143 R 351605 CDS YP_001229666.1 148262960 5162902 1051096..1052382 1 NC_009483.1 transposase 1052382 5162902 Gura_0887 Geobacter uraniireducens Rf4 transposase YP_001229666.1 1051096 D 351605 CDS YP_001229667.1 148262961 5163102 complement(1052589..1054112) 1 NC_009483.1 PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; NADH dehydrogenase (ubiquinone), 30 kDa subunit; NADH-ubiquinone oxidoreductase subunit 49kDa 1054112 5163102 Gura_0888 Geobacter uraniireducens Rf4 NADH-ubiquinone oxidoreductase subunit 49kDa YP_001229667.1 1052589 R 351605 CDS YP_001229668.1 148262962 5163103 complement(1054109..1055542) 1 NC_009483.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase (quinone) 1055542 5163103 Gura_0889 Geobacter uraniireducens Rf4 NADH dehydrogenase (quinone) YP_001229668.1 1054109 R 351605 CDS YP_001229669.1 148262963 5163104 complement(1055547..1056191) 1 NC_009483.1 hydrogenase 4 membrane component (E)-like protein 1056191 5163104 Gura_0890 Geobacter uraniireducens Rf4 hydrogenase 4 membrane component (E)-like protein YP_001229669.1 1055547 R 351605 CDS YP_001229670.1 148262964 5165763 complement(1056188..1057096) 1 NC_009483.1 formate hydrogenlyase subunit 4-like protein 1057096 5165763 Gura_0891 Geobacter uraniireducens Rf4 formate hydrogenlyase subunit 4-like protein YP_001229670.1 1056188 R 351605 CDS YP_001229671.1 148262965 5165764 complement(1057148..1059157) 1 NC_009483.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase (quinone) 1059157 5165764 Gura_0892 Geobacter uraniireducens Rf4 NADH dehydrogenase (quinone) YP_001229671.1 1057148 R 351605 CDS YP_001229672.1 148262966 5165765 complement(1059194..1059886) 1 NC_009483.1 TIGRFAM: DNA binding domain, excisionase family; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; putative PTS IIA-like nitrogen-regulatory protein PtsN 1059886 5165765 Gura_0893 Geobacter uraniireducens Rf4 putative PTS IIA-like nitrogen-regulatory protein PtsN YP_001229672.1 1059194 R 351605 CDS YP_001229673.1 148262967 5164178 complement(1060257..1060931) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1060931 5164178 Gura_0894 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001229673.1 1060257 R 351605 CDS YP_001229674.1 148262968 5164179 complement(1060924..1062087) 1 NC_009483.1 PFAM: protein of unknown function DUF214; hypothetical protein 1062087 5164179 Gura_0895 Geobacter uraniireducens Rf4 hypothetical protein YP_001229674.1 1060924 R 351605 CDS YP_001229675.1 148262969 5164180 complement(1062088..1062474) 1 NC_009483.1 hypothetical protein 1062474 5164180 Gura_0896 Geobacter uraniireducens Rf4 hypothetical protein YP_001229675.1 1062088 R 351605 CDS YP_001229676.1 148262970 5163117 complement(1062762..1063091) 1 NC_009483.1 hypothetical protein 1063091 5163117 Gura_0897 Geobacter uraniireducens Rf4 hypothetical protein YP_001229676.1 1062762 R 351605 CDS YP_001229677.1 148262971 5163118 1063406..1063630 1 NC_009483.1 PFAM: CopG domain protein DNA-binding domain protein; CopG/DNA-binding domain-containing protein 1063630 5163118 Gura_0898 Geobacter uraniireducens Rf4 CopG/DNA-binding domain-containing protein YP_001229677.1 1063406 D 351605 CDS YP_001229678.1 148262972 5163119 1063664..1064437 1 NC_009483.1 PFAM: Integral membrane protein TerC; integral membrane protein TerC 1064437 5163119 Gura_0899 Geobacter uraniireducens Rf4 integral membrane protein TerC YP_001229678.1 1063664 D 351605 CDS YP_001229679.1 148262973 5163304 1064455..1064769 1 NC_009483.1 hypothetical protein 1064769 5163304 Gura_0900 Geobacter uraniireducens Rf4 hypothetical protein YP_001229679.1 1064455 D 351605 CDS YP_001229680.1 148262974 5163305 1064794..1065738 1 NC_009483.1 PFAM: import inner membrane translocase, subunit Tim44; import inner membrane translocase subunit Tim44 1065738 5163305 Gura_0901 Geobacter uraniireducens Rf4 import inner membrane translocase subunit Tim44 YP_001229680.1 1064794 D 351605 CDS YP_001229681.1 148262975 5163306 1066037..1068715 1 NC_009483.1 PFAM: protein of unknown function UPF0182; hypothetical protein 1068715 5163306 Gura_0902 Geobacter uraniireducens Rf4 hypothetical protein YP_001229681.1 1066037 D 351605 CDS YP_001229682.1 148262976 5162840 complement(1069020..1069274) 1 NC_009483.1 hypothetical protein 1069274 5162840 Gura_0903 Geobacter uraniireducens Rf4 hypothetical protein YP_001229682.1 1069020 R 351605 CDS YP_001229683.1 148262977 5162841 complement(1069357..1069836) 1 NC_009483.1 hypothetical protein 1069836 5162841 Gura_0904 Geobacter uraniireducens Rf4 hypothetical protein YP_001229683.1 1069357 R 351605 CDS YP_001229684.1 148262978 5162842 complement(1069905..1071545) 1 NC_009483.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; small GTP-binding protein 1071545 5162842 Gura_0905 Geobacter uraniireducens Rf4 small GTP-binding protein YP_001229684.1 1069905 R 351605 CDS YP_001229685.1 148262979 5166569 complement(1071704..1072474) 1 NC_009483.1 PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1072474 5166569 Gura_0906 Geobacter uraniireducens Rf4 short-chain dehydrogenase/reductase SDR YP_001229685.1 1071704 R 351605 CDS YP_001229686.1 148262980 5166570 1072639..1074285 1 NC_009483.1 PFAM: GAF domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 1074285 5166570 Gura_0907 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001229686.1 1072639 D 351605 CDS YP_001229687.1 148262981 5166571 complement(1074328..1074594) 1 NC_009483.1 hypothetical protein 1074594 5166571 Gura_0908 Geobacter uraniireducens Rf4 hypothetical protein YP_001229687.1 1074328 R 351605 CDS YP_001229688.1 148262982 5162751 complement(1074607..1074852) 1 NC_009483.1 hypothetical protein 1074852 5162751 Gura_0909 Geobacter uraniireducens Rf4 hypothetical protein YP_001229688.1 1074607 R 351605 CDS YP_001229689.1 148262983 5162752 1075120..1075542 1 NC_009483.1 hypothetical protein 1075542 5162752 Gura_0910 Geobacter uraniireducens Rf4 hypothetical protein YP_001229689.1 1075120 D 351605 CDS YP_001229690.1 148262984 5162753 complement(1075570..1075965) 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 1075965 5162753 Gura_0911 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001229690.1 1075570 R 351605 CDS YP_001229691.1 148262985 5165712 1076179..1076661 1 NC_009483.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; ybaK/ebsC protein 1076661 5165712 Gura_0912 Geobacter uraniireducens Rf4 ybaK/ebsC protein YP_001229691.1 1076179 D 351605 CDS YP_001229692.1 148262986 5165713 1076750..1077574 1 NC_009483.1 PFAM: Silent information regulator protein Sir2; silent information regulator protein Sir2 1077574 5165713 Gura_0913 Geobacter uraniireducens Rf4 silent information regulator protein Sir2 YP_001229692.1 1076750 D 351605 CDS YP_001229693.1 148262987 5165714 1077609..1078652 1 NC_009483.1 TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; dihydroorotate dehydrogenase; nifR3 family TIM-barrel protein 1078652 5165714 Gura_0914 Geobacter uraniireducens Rf4 nifR3 family TIM-barrel protein YP_001229693.1 1077609 D 351605 CDS YP_001229694.1 148262988 5165964 1078642..1079730 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; nitrogen-specific signal transduction histidine kinase NtrB 1079730 5165964 Gura_0915 Geobacter uraniireducens Rf4 nitrogen-specific signal transduction histidine kinase NtrB YP_001229694.1 1078642 D 351605 CDS YP_001229695.1 148262989 5165965 1079840..1081282 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 1081282 5165965 Gura_0916 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001229695.1 1079840 D 351605 CDS YP_001229696.1 148262990 5165966 1081546..1082109 1 NC_009483.1 PFAM: isochorismatase hydrolase; isochorismatase hydrolase 1082109 5165966 Gura_0917 Geobacter uraniireducens Rf4 isochorismatase hydrolase YP_001229696.1 1081546 D 351605 CDS YP_001229697.1 148262991 5165838 1082450..1083391 1 NC_009483.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator 1083391 5165838 Gura_0918 Geobacter uraniireducens Rf4 LysR family transcriptional regulator YP_001229697.1 1082450 D 351605 CDS YP_001229698.1 148262992 5165839 complement(1083486..1086557) 1 NC_009483.1 PFAM: PKD domain containing protein; PKD domain-containing protein 1086557 5165839 Gura_0919 Geobacter uraniireducens Rf4 PKD domain-containing protein YP_001229698.1 1083486 R 351605 CDS YP_001229699.1 148262993 5165840 complement(1086576..1086983) 1 NC_009483.1 hypothetical protein 1086983 5165840 Gura_0920 Geobacter uraniireducens Rf4 hypothetical protein YP_001229699.1 1086576 R 351605 CDS YP_001229700.1 148262994 5166710 complement(1087566..1091048) 1 NC_009483.1 hypothetical protein 1091048 5166710 Gura_0921 Geobacter uraniireducens Rf4 hypothetical protein YP_001229700.1 1087566 R 351605 CDS YP_001229701.1 148262995 5166711 complement(1091079..1091543) 1 NC_009483.1 hypothetical protein 1091543 5166711 Gura_0922 Geobacter uraniireducens Rf4 hypothetical protein YP_001229701.1 1091079 R 351605 CDS YP_001229702.1 148262996 5166643 complement(1091905..1093044) 1 NC_009483.1 PFAM: NHL repeat containing protein; NHL repeat-containing protein 1093044 5166643 Gura_0923 Geobacter uraniireducens Rf4 NHL repeat-containing protein YP_001229702.1 1091905 R 351605 CDS YP_001229703.1 148262997 5166644 complement(1093175..1093966) 1 NC_009483.1 hypothetical protein 1093966 5166644 Gura_0924 Geobacter uraniireducens Rf4 hypothetical protein YP_001229703.1 1093175 R 351605 CDS YP_001229704.1 148262998 5166645 complement(1094386..1095888) 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 1095888 5166645 Gura_0925 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001229704.1 1094386 R 351605 CDS YP_001229705.1 148262999 5166176 complement(1096542..1097243) 1 NC_009483.1 PFAM: response regulator receiver; type IV pilus assembly PilZ; response regulator receiver modulated PilZ sensor protein 1097243 5166176 Gura_0926 Geobacter uraniireducens Rf4 response regulator receiver modulated PilZ sensor protein YP_001229705.1 1096542 R 351605 CDS YP_001229706.1 148263000 5166177 complement(1097418..1098716) 1 NC_009483.1 hypothetical protein 1098716 5166177 Gura_0927 Geobacter uraniireducens Rf4 hypothetical protein YP_001229706.1 1097418 R 351605 CDS YP_001229707.1 148263001 5166178 complement(1098783..1100132) 1 NC_009483.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; replicative DNA helicase 1100132 5166178 Gura_0928 Geobacter uraniireducens Rf4 replicative DNA helicase YP_001229707.1 1098783 R 351605 CDS YP_001229708.1 148263002 5166572 complement(1100257..1100991) 1 NC_009483.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O, RecO; DNA repair protein RecO 1100991 5166572 Gura_0929 Geobacter uraniireducens Rf4 DNA repair protein RecO YP_001229708.1 1100257 R 351605 CDS YP_001229709.1 148263003 5166573 1101316..1102575 1 NC_009483.1 hypothetical protein 1102575 5166573 Gura_0930 Geobacter uraniireducens Rf4 hypothetical protein YP_001229709.1 1101316 D 351605 CDS YP_001229710.1 148263004 5166574 complement(1102813..1103256) 1 NC_009483.1 hypothetical protein 1103256 5166574 Gura_0931 Geobacter uraniireducens Rf4 hypothetical protein YP_001229710.1 1102813 R 351605 CDS YP_001229711.1 148263005 5165682 complement(1103321..1103812) 1 NC_009483.1 PFAM: dihydrofolate reductase region; dihydrofolate reductase 1103812 5165682 Gura_0932 Geobacter uraniireducens Rf4 dihydrofolate reductase YP_001229711.1 1103321 R 351605 CDS YP_001229712.1 148263006 5165683 complement(1103841..1105043) 1 NC_009483.1 PFAM: amine oxidase; FAD dependent oxidoreductase; amine oxidase 1105043 5165683 Gura_0933 Geobacter uraniireducens Rf4 amine oxidase YP_001229712.1 1103841 R 351605 CDS YP_001229713.1 148263007 5165684 1105391..1106404 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 1106404 5165684 Gura_0934 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001229713.1 1105391 D 351605 CDS YP_001229714.1 148263008 5165893 complement(1106487..1108844) 1 NC_009483.1 TIGRFAM: MutS2 family protein; PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein; MutS2 family protein 1108844 5165893 Gura_0935 Geobacter uraniireducens Rf4 MutS2 family protein YP_001229714.1 1106487 R 351605 CDS YP_001229715.1 148263009 5165894 complement(1109043..1111448) 1 NC_009483.1 hypothetical protein 1111448 5165894 Gura_0936 Geobacter uraniireducens Rf4 hypothetical protein YP_001229715.1 1109043 R 351605 CDS YP_001229716.1 148263010 5165895 complement(1111742..1112932) 1 NC_009483.1 PFAM: phospholipase D/Transphosphatidylase; phospholipase D/transphosphatidylase 1112932 5165895 Gura_0937 Geobacter uraniireducens Rf4 phospholipase D/transphosphatidylase YP_001229716.1 1111742 R 351605 CDS YP_001229717.1 148263011 5164684 complement(1113069..1113269) 1 NC_009483.1 hypothetical protein 1113269 5164684 Gura_0938 Geobacter uraniireducens Rf4 hypothetical protein YP_001229717.1 1113069 R 351605 CDS YP_001229718.1 148263012 5164685 complement(1113349..1113570) 1 NC_009483.1 PFAM: nitrogen-fixing NifU domain protein; NifU domain-containing protein 1113570 5164685 Gura_0939 Geobacter uraniireducens Rf4 NifU domain-containing protein YP_001229718.1 1113349 R 351605 CDS YP_001229719.1 148263013 5164686 complement(1113686..1115089) 1 NC_009483.1 catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 1115089 aspA 5164686 aspA Geobacter uraniireducens Rf4 aspartate ammonia-lyase YP_001229719.1 1113686 R 351605 CDS YP_001229720.1 148263014 5163454 complement(1115227..1115688) 1 NC_009483.1 PFAM: Rubrerythrin; rubrerythrin 1115688 5163454 Gura_0941 Geobacter uraniireducens Rf4 rubrerythrin YP_001229720.1 1115227 R 351605 CDS YP_001229721.1 148263015 5163455 complement(1115685..1116323) 1 NC_009483.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase 1116323 5163455 Gura_0942 Geobacter uraniireducens Rf4 HAD family hydrolase YP_001229721.1 1115685 R 351605 CDS YP_001229722.1 148263016 5163456 complement(1116385..1117542) 1 NC_009483.1 PFAM: protein of unknown function DUF185; hypothetical protein 1117542 5163456 Gura_0943 Geobacter uraniireducens Rf4 hypothetical protein YP_001229722.1 1116385 R 351605 CDS YP_001229723.1 148263017 5163988 complement(1117836..1118828) 1 NC_009483.1 PFAM: Helix-turn-helix, type 11 domain protein; helix-turn-helix, type 11 domain-containing protein 1118828 5163988 Gura_0944 Geobacter uraniireducens Rf4 helix-turn-helix, type 11 domain-containing protein YP_001229723.1 1117836 R 351605 CDS YP_001229724.1 148263018 5163989 complement(1118831..1120186) 1 NC_009483.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase 1120186 5163989 Gura_0945 Geobacter uraniireducens Rf4 DEAD/DEAH box helicase YP_001229724.1 1118831 R 351605 CDS YP_001229725.1 148263019 5163990 complement(1121325..1121732) 1 NC_009483.1 PFAM: PilT protein domain protein; PilT domain-containing protein 1121732 5163990 Gura_0946 Geobacter uraniireducens Rf4 PilT domain-containing protein YP_001229725.1 1121325 R 351605 CDS YP_001229726.1 148263020 5166989 complement(1121729..1121929) 1 NC_009483.1 hypothetical protein 1121929 5166989 Gura_0947 Geobacter uraniireducens Rf4 hypothetical protein YP_001229726.1 1121729 R 351605 CDS YP_001229727.1 148263021 5166990 1122412..1122855 1 NC_009483.1 hypothetical protein 1122855 5166990 Gura_0948 Geobacter uraniireducens Rf4 hypothetical protein YP_001229727.1 1122412 D 351605 CDS YP_001229728.1 148263022 5166991 1122879..1123364 1 NC_009483.1 hypothetical protein 1123364 5166991 Gura_0949 Geobacter uraniireducens Rf4 hypothetical protein YP_001229728.1 1122879 D 351605 CDS YP_001229729.1 148263023 5166558 1123525..1124490 1 NC_009483.1 PFAM: protein of unknown function DUF1568; hypothetical protein 1124490 5166558 Gura_0950 Geobacter uraniireducens Rf4 hypothetical protein YP_001229729.1 1123525 D 351605 CDS YP_001229730.1 148263024 5166559 1124728..1128309 1 NC_009483.1 PFAM: peptidase S10, serine carboxypeptidase; Pyridoxal-dependent decarboxylase; peptidase S10, serine carboxypeptidase 1128309 5166559 Gura_0951 Geobacter uraniireducens Rf4 peptidase S10, serine carboxypeptidase YP_001229730.1 1124728 D 351605 CDS YP_001229731.1 148263025 5166560 complement(1128636..1128812) 1 NC_009483.1 hypothetical protein 1128812 5166560 Gura_0952 Geobacter uraniireducens Rf4 hypothetical protein YP_001229731.1 1128636 R 351605 CDS YP_001229732.1 148263026 5166232 complement(1128799..1129035) 1 NC_009483.1 hypothetical protein 1129035 5166232 Gura_0953 Geobacter uraniireducens Rf4 hypothetical protein YP_001229732.1 1128799 R 351605 CDS YP_001229733.1 148263027 5166233 1129587..1130888 1 NC_009483.1 PFAM: peptidase M23B; peptidase M23B 1130888 5166233 Gura_0954 Geobacter uraniireducens Rf4 peptidase M23B YP_001229733.1 1129587 D 351605 CDS YP_001229734.1 148263028 5166234 1131007..1131630 1 NC_009483.1 TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: putative methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 1131630 5166234 Gura_0955 Geobacter uraniireducens Rf4 tRNA (guanine-N(7)-)-methyltransferase YP_001229734.1 1131007 D 351605 CDS YP_001229735.1 148263029 5166850 complement(1131916..1134876) 1 NC_009483.1 PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase 1134876 5166850 Gura_0956 Geobacter uraniireducens Rf4 Glu/Leu/Phe/Val dehydrogenase YP_001229735.1 1131916 R 351605 CDS YP_001229736.1 148263030 5166851 complement(1135014..1135523) 1 NC_009483.1 PFAM: CheW domain protein; putative CheW protein 1135523 5166851 Gura_0957 Geobacter uraniireducens Rf4 putative CheW protein YP_001229736.1 1135014 R 351605 CDS YP_001229737.1 148263031 5166852 complement(1135831..1136037) 1 NC_009483.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 1136037 5166852 Gura_0958 Geobacter uraniireducens Rf4 cold-shock DNA-binding domain-containing protein YP_001229737.1 1135831 R 351605 CDS YP_001229738.1 148263032 5166450 complement(1136238..1136867) 1 NC_009483.1 hypothetical protein 1136867 5166450 Gura_0959 Geobacter uraniireducens Rf4 hypothetical protein YP_001229738.1 1136238 R 351605 CDS YP_001229739.1 148263033 5166451 1137271..1139271 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1139271 5166451 Gura_0960 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001229739.1 1137271 D 351605 CDS YP_001229740.1 148263034 5166452 1139443..1139793 1 NC_009483.1 hypothetical protein 1139793 5166452 Gura_0961 Geobacter uraniireducens Rf4 hypothetical protein YP_001229740.1 1139443 D 351605 CDS YP_001229741.1 148263035 5163579 1139961..1141244 1 NC_009483.1 hypothetical protein 1141244 5163579 Gura_0962 Geobacter uraniireducens Rf4 hypothetical protein YP_001229741.1 1139961 D 351605 CDS YP_001229742.1 148263036 5163580 complement(1141288..1141887) 1 NC_009483.1 PFAM: CheD family protein; CheD, stimulates methylation of MCP protein 1141887 5163580 Gura_0963 Geobacter uraniireducens Rf4 CheD, stimulates methylation of MCP protein YP_001229742.1 1141288 R 351605 CDS YP_001229743.1 148263037 5163581 complement(1142814..1143443) 1 NC_009483.1 PFAM: dienelactone hydrolase; dienelactone hydrolase 1143443 5163581 Gura_0964 Geobacter uraniireducens Rf4 dienelactone hydrolase YP_001229743.1 1142814 R 351605 CDS YP_001229744.1 148263038 5166754 complement(1143465..1144091) 1 NC_009483.1 PFAM: phosphoribosyltransferase; phosphoribosyltransferase 1144091 5166754 Gura_0965 Geobacter uraniireducens Rf4 phosphoribosyltransferase YP_001229744.1 1143465 R 351605 CDS YP_001229745.1 148263039 5166755 complement(1144550..1147480) 1 NC_009483.1 PFAM: peptidase S9B, dipeptidylpeptidase IV domain protein; WD40 domain protein beta Propeller; peptidase S9B dipeptidylpeptidase IV subunit 1147480 5166755 Gura_0966 Geobacter uraniireducens Rf4 peptidase S9B dipeptidylpeptidase IV subunit YP_001229745.1 1144550 R 351605 CDS YP_001229746.1 148263040 5166756 complement(1147769..1148728) 1 NC_009483.1 PFAM: Rhomboid family protein; rhomboid family protein 1148728 5166756 Gura_0967 Geobacter uraniireducens Rf4 rhomboid family protein YP_001229746.1 1147769 R 351605 CDS YP_001229747.1 148263041 5162894 complement(1148762..1149412) 1 NC_009483.1 PFAM: phosphoesterase, PA-phosphatase related; PA-phosphatase-like protein 1149412 5162894 Gura_0968 Geobacter uraniireducens Rf4 PA-phosphatase-like protein YP_001229747.1 1148762 R 351605 CDS YP_001229748.1 148263042 5162895 1149671..1150159 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 1150159 5162895 Gura_0969 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001229748.1 1149671 D 351605 CDS YP_001229749.1 148263043 5162896 complement(1150167..1152254) 1 NC_009483.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; transketolase 1152254 5162896 Gura_0970 Geobacter uraniireducens Rf4 transketolase YP_001229749.1 1150167 R 351605 CDS YP_001229750.1 148263044 5162933 1152744..1153943 1 NC_009483.1 PFAM: tRNA pseudouridine synthase D, TruD; tRNA pseudouridine synthase D 1153943 5162933 Gura_0971 Geobacter uraniireducens Rf4 tRNA pseudouridine synthase D YP_001229750.1 1152744 D 351605 CDS YP_001229751.1 148263045 5162934 1154002..1154325 1 NC_009483.1 hypothetical protein 1154325 5162934 Gura_0972 Geobacter uraniireducens Rf4 hypothetical protein YP_001229751.1 1154002 D 351605 CDS YP_001229752.1 148263046 5162935 1154318..1155847 1 NC_009483.1 PFAM: Na+/solute symporter; Na+/solute symporter 1155847 5162935 Gura_0973 Geobacter uraniireducens Rf4 Na+/solute symporter YP_001229752.1 1154318 D 351605 CDS YP_001229753.1 148263047 5166775 1156003..1157244 1 NC_009483.1 PFAM: protein of unknown function DUF294, nucleotidyltransferase putative; hypothetical protein 1157244 5166775 Gura_0974 Geobacter uraniireducens Rf4 hypothetical protein YP_001229753.1 1156003 D 351605 CDS YP_001229754.1 148263048 5166776 1157253..1158062 1 NC_009483.1 PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 1158062 5166776 Gura_0975 Geobacter uraniireducens Rf4 xylose isomerase domain-containing protein YP_001229754.1 1157253 D 351605 CDS YP_001229755.1 148263049 5166777 1158161..1158985 1 NC_009483.1 PFAM: polysaccharide deacetylase; polysaccharide deacetylase 1158985 5166777 Gura_0976 Geobacter uraniireducens Rf4 polysaccharide deacetylase YP_001229755.1 1158161 D 351605 CDS YP_001229756.1 148263050 5163028 1159150..1159332 1 NC_009483.1 hypothetical protein 1159332 5163028 Gura_0977 Geobacter uraniireducens Rf4 hypothetical protein YP_001229756.1 1159150 D 351605 CDS YP_001229757.1 148263051 5163029 1159468..1160310 1 NC_009483.1 PFAM: response regulator receiver; General secretory system II, protein E domain protein; response regulator receiver protein 1160310 5163029 Gura_0978 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001229757.1 1159468 D 351605 CDS YP_001229758.1 148263052 5163030 complement(1160419..1161231) 1 NC_009483.1 TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; pyrroline-5-carboxylate reductase 1161231 5163030 Gura_0979 Geobacter uraniireducens Rf4 pyrroline-5-carboxylate reductase YP_001229758.1 1160419 R 351605 CDS YP_001229759.1 148263053 5163227 1161676..1162221 1 NC_009483.1 PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; XRE family transcriptional regulator 1162221 5163227 Gura_0980 Geobacter uraniireducens Rf4 XRE family transcriptional regulator YP_001229759.1 1161676 D 351605 CDS YP_001229760.1 148263054 5163228 1162321..1163517 1 NC_009483.1 PFAM: Saccharopine dehydrogenase; saccharopine dehydrogenase 1163517 5163228 Gura_0981 Geobacter uraniireducens Rf4 saccharopine dehydrogenase YP_001229760.1 1162321 D 351605 CDS YP_001229761.1 148263055 5163229 1163610..1164764 1 NC_009483.1 TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; carboxynorspermidine decarboxylase 1164764 5163229 Gura_0982 Geobacter uraniireducens Rf4 carboxynorspermidine decarboxylase YP_001229761.1 1163610 D 351605 CDS YP_001229762.1 148263056 5163174 1164877..1166784 1 NC_009483.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 1166784 5163174 Gura_0983 Geobacter uraniireducens Rf4 arginine decarboxylase YP_001229762.1 1164877 D 351605 CDS YP_001229763.1 148263057 5163175 1166913..1168127 1 NC_009483.1 PFAM: major facilitator superfamily MFS_1; major facilitator transporter 1168127 5163175 Gura_0984 Geobacter uraniireducens Rf4 major facilitator transporter YP_001229763.1 1166913 D 351605 CDS YP_001229764.1 148263058 5163176 1168197..1168583 1 NC_009483.1 PFAM: Hpt domain protein; Hpt domain-containing protein 1168583 5163176 Gura_0985 Geobacter uraniireducens Rf4 Hpt domain-containing protein YP_001229764.1 1168197 D 351605 CDS YP_001229765.1 148263059 5163150 1169102..1169695 1 NC_009483.1 PFAM: regulatory protein, TetR; TetR family transcriptional regulator 1169695 5163150 Gura_0986 Geobacter uraniireducens Rf4 TetR family transcriptional regulator YP_001229765.1 1169102 D 351605 CDS YP_001229766.1 148263060 5163151 1169845..1171059 1 NC_009483.1 hypothetical protein 1171059 5163151 Gura_0987 Geobacter uraniireducens Rf4 hypothetical protein YP_001229766.1 1169845 D 351605 CDS YP_001229767.1 148263061 5163152 1171075..1171776 1 NC_009483.1 hypothetical protein 1171776 5163152 Gura_0988 Geobacter uraniireducens Rf4 hypothetical protein YP_001229767.1 1171075 D 351605 CDS YP_001229768.1 148263062 5163221 1171752..1173539 1 NC_009483.1 hypothetical protein 1173539 5163221 Gura_0989 Geobacter uraniireducens Rf4 hypothetical protein YP_001229768.1 1171752 D 351605 CDS YP_001229769.1 148263063 5163222 1173630..1174790 1 NC_009483.1 hypothetical protein 1174790 5163222 Gura_0990 Geobacter uraniireducens Rf4 hypothetical protein YP_001229769.1 1173630 D 351605 CDS YP_001229770.1 148263064 5163223 1175299..1176516 1 NC_009483.1 hypothetical protein 1176516 5163223 Gura_0991 Geobacter uraniireducens Rf4 hypothetical protein YP_001229770.1 1175299 D 351605 CDS YP_001229771.1 148263065 5163593 1176532..1177311 1 NC_009483.1 hypothetical protein 1177311 5163593 Gura_0992 Geobacter uraniireducens Rf4 hypothetical protein YP_001229771.1 1176532 D 351605 CDS YP_001229772.1 148263066 5163594 1177337..1179124 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 1179124 5163594 Gura_0993 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001229772.1 1177337 D 351605 CDS YP_001229773.1 148263067 5163595 1179201..1180805 1 NC_009483.1 hypothetical protein 1180805 5163595 Gura_0994 Geobacter uraniireducens Rf4 hypothetical protein YP_001229773.1 1179201 D 351605 CDS YP_001229774.1 148263068 5163922 1180946..1181521 1 NC_009483.1 hypothetical protein 1181521 5163922 Gura_0995 Geobacter uraniireducens Rf4 hypothetical protein YP_001229774.1 1180946 D 351605 CDS YP_001229775.1 148263069 5163923 1182540..1182947 1 NC_009483.1 hypothetical protein 1182947 5163923 Gura_0996 Geobacter uraniireducens Rf4 hypothetical protein YP_001229775.1 1182540 D 351605 CDS YP_001229776.1 148263070 5163924 1183241..1184263 1 NC_009483.1 PFAM: molybdopterin binding domain; molybdopterin binding domain-containing protein 1184263 5163924 Gura_0997 Geobacter uraniireducens Rf4 molybdopterin binding domain-containing protein YP_001229776.1 1183241 D 351605 CDS YP_001229777.1 148263071 5164049 1184516..1187311 1 NC_009483.1 PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 1187311 5164049 Gura_0998 Geobacter uraniireducens Rf4 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase YP_001229777.1 1184516 D 351605 CDS YP_001229778.1 148263072 5164050 1187510..1189825 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; 4Fe-4S ferredoxin 1189825 5164050 Gura_0999 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001229778.1 1187510 D 351605 CDS YP_001229779.1 148263073 5164300 1189822..1190025 1 NC_009483.1 hypothetical protein 1190025 5164300 Gura_1000 Geobacter uraniireducens Rf4 hypothetical protein YP_001229779.1 1189822 D 351605 CDS YP_001229780.1 148263074 5164301 1190106..1190819 1 NC_009483.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 1190819 5164301 Gura_1001 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001229780.1 1190106 D 351605 CDS YP_001229781.1 148263075 5164302 1190987..1191430 1 NC_009483.1 hypothetical protein 1191430 5164302 Gura_1002 Geobacter uraniireducens Rf4 hypothetical protein YP_001229781.1 1190987 D 351605 CDS YP_001229782.1 148263076 5164378 1191590..1192966 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 1192966 5164378 Gura_1003 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001229782.1 1191590 D 351605 CDS YP_001229783.1 148263077 5164379 1192957..1194285 1 NC_009483.1 coenzyme F390 synthetase-like protein 1194285 5164379 Gura_1004 Geobacter uraniireducens Rf4 coenzyme F390 synthetase-like protein YP_001229783.1 1192957 D 351605 CDS YP_001229784.1 148263078 5164380 1194279..1195334 1 NC_009483.1 PFAM: protein of unknown function DUF182; hypothetical protein 1195334 5164380 Gura_1005 Geobacter uraniireducens Rf4 hypothetical protein YP_001229784.1 1194279 D 351605 CDS YP_001229785.1 148263079 5164491 1195335..1196456 1 NC_009483.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; metal dependent phosphohydrolase 1196456 5164491 Gura_1006 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001229785.1 1195335 D 351605 CDS YP_001229786.1 148263080 5164492 1196453..1197178 1 NC_009483.1 PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 1197178 5164492 Gura_1007 Geobacter uraniireducens Rf4 phosphoglycerate mutase YP_001229786.1 1196453 D 351605 CDS YP_001229787.1 148263081 5164493 complement(1197201..1197452) 1 NC_009483.1 hypothetical protein 1197452 5164493 Gura_1008 Geobacter uraniireducens Rf4 hypothetical protein YP_001229787.1 1197201 R 351605 CDS YP_001229788.1 148263082 5164527 complement(1197436..1197711) 1 NC_009483.1 PFAM: protein of unknown function DUF497; hypothetical protein 1197711 5164527 Gura_1009 Geobacter uraniireducens Rf4 hypothetical protein YP_001229788.1 1197436 R 351605 CDS YP_001229789.1 148263083 5164528 complement(1197823..1198179) 1 NC_009483.1 hypothetical protein 1198179 5164528 Gura_1010 Geobacter uraniireducens Rf4 hypothetical protein YP_001229789.1 1197823 R 351605 CDS YP_001229790.1 148263084 5164529 complement(1198169..1199332) 1 NC_009483.1 PFAM: protein of unknown function DUF1016; hypothetical protein 1199332 5164529 Gura_1011 Geobacter uraniireducens Rf4 hypothetical protein YP_001229790.1 1198169 R 351605 CDS YP_001229791.1 148263085 5164717 complement(1199884..1200879) 1 NC_009483.1 hypothetical protein 1200879 5164717 Gura_1012 Geobacter uraniireducens Rf4 hypothetical protein YP_001229791.1 1199884 R 351605 CDS YP_001229792.1 148263086 5164718 complement(1200866..1205242) 1 NC_009483.1 chromosome segregation ATPase-like protein 1205242 5164718 Gura_1013 Geobacter uraniireducens Rf4 chromosome segregation ATPase-like protein YP_001229792.1 1200866 R 351605 CDS YP_001229793.1 148263087 5164719 complement(1205235..1205984) 1 NC_009483.1 hypothetical protein 1205984 5164719 Gura_1014 Geobacter uraniireducens Rf4 hypothetical protein YP_001229793.1 1205235 R 351605 CDS YP_001229794.1 148263088 5164862 complement(1205981..1207507) 1 NC_009483.1 hypothetical protein 1207507 5164862 Gura_1015 Geobacter uraniireducens Rf4 hypothetical protein YP_001229794.1 1205981 R 351605 CDS YP_001229795.1 148263089 5164863 complement(1207842..1208999) 1 NC_009483.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; XRE family plasmid maintenance system antidote protein 1208999 5164863 Gura_1016 Geobacter uraniireducens Rf4 XRE family plasmid maintenance system antidote protein YP_001229795.1 1207842 R 351605 CDS YP_001229796.1 148263090 5164864 complement(1209625..1210623) 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 1210623 5164864 Gura_1017 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001229796.1 1209625 R 351605 CDS YP_001229797.1 148263091 5164842 complement(1210853..1212766) 1 NC_009483.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1212766 5164842 Gura_1018 Geobacter uraniireducens Rf4 1-deoxy-D-xylulose-5-phosphate synthase YP_001229797.1 1210853 R 351605 CDS YP_001229798.1 148263092 5164843 complement(1212914..1213900) 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; NmrA family protein; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 1213900 5164843 Gura_1019 Geobacter uraniireducens Rf4 NAD-dependent epimerase/dehydratase YP_001229798.1 1212914 R 351605 CDS YP_001229799.1 148263093 5164844 complement(1213911..1215950) 1 NC_009483.1 TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; squalene-hopene cyclase 1215950 5164844 Gura_1020 Geobacter uraniireducens Rf4 squalene-hopene cyclase YP_001229799.1 1213911 R 351605 CDS YP_001229800.1 148263094 5165259 1216200..1218962 1 NC_009483.1 RND efflux transporter 1218962 5165259 Gura_1021 Geobacter uraniireducens Rf4 RND efflux transporter YP_001229800.1 1216200 D 351605 CDS YP_001229801.1 148263095 5165260 1219021..1219623 1 NC_009483.1 PFAM: putative rRNA methylase; putative rRNA methylase 1219623 5165260 Gura_1022 Geobacter uraniireducens Rf4 putative rRNA methylase YP_001229801.1 1219021 D 351605 CDS YP_001229802.1 148263096 5165261 1219921..1220730 1 NC_009483.1 PFAM: protein of unknown function DUF399; hypothetical protein 1220730 5165261 Gura_1023 Geobacter uraniireducens Rf4 hypothetical protein YP_001229802.1 1219921 D 351605 CDS YP_001229803.1 148263097 5164803 1220895..1222385 1 NC_009483.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; sigma-54 dependent trancsriptional regulator 1222385 5164803 Gura_1024 Geobacter uraniireducens Rf4 sigma-54 dependent trancsriptional regulator YP_001229803.1 1220895 D 351605 CDS YP_001229804.1 148263098 5164804 1222428..1224689 1 NC_009483.1 PFAM: helicase domain protein; type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; type III restriction enzyme, res subunit 1224689 5164804 Gura_1025 Geobacter uraniireducens Rf4 type III restriction enzyme, res subunit YP_001229804.1 1222428 D 351605 CDS YP_001229805.1 148263099 5164805 1224692..1226341 1 NC_009483.1 PFAM: N-6 DNA methylase; N-6 DNA methylase 1226341 5164805 Gura_1026 Geobacter uraniireducens Rf4 N-6 DNA methylase YP_001229805.1 1224692 D 351605 CDS YP_001229806.1 148263100 5165238 1226341..1227603 1 NC_009483.1 PFAM: restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit 1227603 5165238 Gura_1027 Geobacter uraniireducens Rf4 restriction modification system DNA specificity subunit YP_001229806.1 1226341 D 351605 CDS YP_001229807.1 148263101 5165239 1227621..1227872 1 NC_009483.1 hypothetical protein 1227872 5165239 Gura_1028 Geobacter uraniireducens Rf4 hypothetical protein YP_001229807.1 1227621 D 351605 CDS YP_001229808.1 148263102 5165240 1227882..1229579 1 NC_009483.1 hypothetical protein 1229579 5165240 Gura_1029 Geobacter uraniireducens Rf4 hypothetical protein YP_001229808.1 1227882 D 351605 CDS YP_001229809.1 148263103 5165377 1229572..1230501 1 NC_009483.1 hypothetical protein 1230501 5165377 Gura_1030 Geobacter uraniireducens Rf4 hypothetical protein YP_001229809.1 1229572 D 351605 CDS YP_001229810.1 148263104 5165378 1230542..1231756 1 NC_009483.1 ceramide glucosyltransferase 1231756 5165378 Gura_1031 Geobacter uraniireducens Rf4 ceramide glucosyltransferase YP_001229810.1 1230542 D 351605 CDS YP_001229811.1 148263105 5165379 1232056..1234122 1 NC_009483.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1234122 5165379 Gura_1032 Geobacter uraniireducens Rf4 elongation factor G YP_001229811.1 1232056 D 351605 CDS YP_001229812.1 148263106 5166784 1234570..1236195 1 NC_009483.1 PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase 1236195 5166784 Gura_1033 Geobacter uraniireducens Rf4 aldehyde dehydrogenase YP_001229812.1 1234570 D 351605 CDS YP_001229813.1 148263107 5166785 1236385..1236735 1 NC_009483.1 hypothetical protein 1236735 5166785 Gura_1034 Geobacter uraniireducens Rf4 hypothetical protein YP_001229813.1 1236385 D 351605 CDS YP_001229814.1 148263108 5166786 1236940..1237236 1 NC_009483.1 hypothetical protein 1237236 5166786 Gura_1035 Geobacter uraniireducens Rf4 hypothetical protein YP_001229814.1 1236940 D 351605 CDS YP_001229815.1 148263109 5165180 complement(1238065..1238637) 1 NC_009483.1 hypothetical protein 1238637 5165180 Gura_1036 Geobacter uraniireducens Rf4 hypothetical protein YP_001229815.1 1238065 R 351605 CDS YP_001229816.1 148263110 5165181 complement(1238983..1240140) 1 NC_009483.1 PFAM: General secretory system II, protein E domain protein; general secretion pathway protein E 1240140 5165181 Gura_1037 Geobacter uraniireducens Rf4 general secretion pathway protein E YP_001229816.1 1238983 R 351605 CDS YP_001229817.1 148263111 5165182 1240323..1241333 1 NC_009483.1 member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 1241333 5165182 Gura_1038 Geobacter uraniireducens Rf4 ribonuclease Z YP_001229817.1 1240323 D 351605 CDS YP_001229818.1 148263112 5165804 1241408..1242178 1 NC_009483.1 PFAM: protein of unknown function DUF140; hypothetical protein 1242178 5165804 Gura_1039 Geobacter uraniireducens Rf4 hypothetical protein YP_001229818.1 1241408 D 351605 CDS YP_001229819.1 148263113 5165805 1242275..1243021 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1243021 5165805 Gura_1040 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001229819.1 1242275 D 351605 CDS YP_001229820.1 148263114 5165806 1243168..1243620 1 NC_009483.1 PFAM: Mammalian cell entry related domain protein; hypothetical protein 1243620 5165806 Gura_1041 Geobacter uraniireducens Rf4 hypothetical protein YP_001229820.1 1243168 D 351605 CDS YP_001229821.1 148263115 5165826 1243740..1245101 1 NC_009483.1 PFAM: outer membrane efflux protein; outer membrane efflux protein 1245101 5165826 Gura_1042 Geobacter uraniireducens Rf4 outer membrane efflux protein YP_001229821.1 1243740 D 351605 CDS YP_001229822.1 148263116 5165827 1245138..1245746 1 NC_009483.1 PFAM: toluene tolerance family protein; toluene tolerance family protein 1245746 5165827 Gura_1043 Geobacter uraniireducens Rf4 toluene tolerance family protein YP_001229822.1 1245138 D 351605 CDS YP_001229823.1 148263117 5165828 1245774..1246409 1 NC_009483.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 1246409 5165828 Gura_1044 Geobacter uraniireducens Rf4 peptide methionine sulfoxide reductase YP_001229823.1 1245774 D 351605 CDS YP_001229824.1 148263118 5165807 1246595..1247683 1 NC_009483.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 1247683 5165807 Gura_1045 Geobacter uraniireducens Rf4 3-isopropylmalate dehydrogenase YP_001229824.1 1246595 D 351605 CDS YP_001229825.1 148263119 5165808 1247757..1248854 1 NC_009483.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 1248854 5165808 Gura_1046 Geobacter uraniireducens Rf4 aspartate-semialdehyde dehydrogenase YP_001229825.1 1247757 D 351605 CDS YP_001229826.1 148263120 5165809 1249100..1250119 1 NC_009483.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region; aspartate-semialdehyde dehydrogenase 1250119 5165809 Gura_1047 Geobacter uraniireducens Rf4 aspartate-semialdehyde dehydrogenase YP_001229826.1 1249100 D 351605 CDS YP_001229827.1 148263121 5166390 1250158..1250892 1 NC_009483.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1250892 truA 5166390 truA Geobacter uraniireducens Rf4 tRNA pseudouridine synthase A YP_001229827.1 1250158 D 351605 CDS YP_001229828.1 148263122 5166391 1250999..1251430 1 NC_009483.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1251430 rplM 5166391 rplM Geobacter uraniireducens Rf4 50S ribosomal protein L13 YP_001229828.1 1250999 D 351605 CDS YP_001229829.1 148263123 5166392 1251465..1251857 1 NC_009483.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1251857 rpsI 5166392 rpsI Geobacter uraniireducens Rf4 30S ribosomal protein S9 YP_001229829.1 1251465 D 351605 CDS YP_001229830.1 148263124 5165881 1252000..1253040 1 NC_009483.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 1253040 argC 5165881 argC Geobacter uraniireducens Rf4 N-acetyl-gamma-glutamyl-phosphate reductase YP_001229830.1 1252000 D 351605 CDS YP_001229831.1 148263125 5165882 1253077..1254894 1 NC_009483.1 PFAM: Radical SAM domain protein; Radical SAM N-terminal domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 1254894 5165882 Gura_1052 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001229831.1 1253077 D 351605 CDS YP_001229832.1 148263126 5166003 1255557..1256747 1 NC_009483.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1256747 5166003 Gura_1053 Geobacter uraniireducens Rf4 elongation factor Tu YP_001229832.1 1255557 D 351605 CDS YP_001229833.1 148263127 5165124 1256805..1256954 1 NC_009483.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 1256954 rpmG 5165124 rpmG Geobacter uraniireducens Rf4 50S ribosomal protein L33 YP_001229833.1 1256805 D 351605 CDS YP_001229834.1 148263128 5165126 1257096..1257290 1 NC_009483.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 1257290 secE 5165126 secE Geobacter uraniireducens Rf4 preprotein translocase subunit SecE YP_001229834.1 1257096 D 351605 CDS YP_001229835.1 148263129 5164775 1257301..1257828 1 NC_009483.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein; NusG antitermination factor 1257828 5164775 Gura_1056 Geobacter uraniireducens Rf4 NusG antitermination factor YP_001229835.1 1257301 D 351605 CDS YP_001229836.1 148263130 5164776 1257903..1258325 1 NC_009483.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 1258325 rplK 5164776 rplK Geobacter uraniireducens Rf4 50S ribosomal protein L11 YP_001229836.1 1257903 D 351605 CDS YP_001229837.1 148263131 5164568 1258347..1259048 1 NC_009483.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 1259048 rplA 5164568 rplA Geobacter uraniireducens Rf4 50S ribosomal protein L1 YP_001229837.1 1258347 D 351605 CDS YP_001229838.1 148263132 5164569 1259242..1259766 1 NC_009483.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 1259766 rplJ 5164569 rplJ Geobacter uraniireducens Rf4 50S ribosomal protein L10 YP_001229838.1 1259242 D 351605 CDS YP_001229839.1 148263133 5164570 1259817..1260197 1 NC_009483.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 1260197 rplL 5164570 rplL Geobacter uraniireducens Rf4 50S ribosomal protein L7/L12 YP_001229839.1 1259817 D 351605 CDS YP_001229840.1 148263134 5163414 1260357..1264469 1 NC_009483.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 1264469 rpoB 5163414 rpoB Geobacter uraniireducens Rf4 DNA-directed RNA polymerase subunit beta YP_001229840.1 1260357 D 351605 CDS YP_001229841.1 148263135 5163415 1264567..1268700 1 NC_009483.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 4; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' 1268700 5163415 Gura_1062 Geobacter uraniireducens Rf4 DNA-directed RNA polymerase subunit beta' YP_001229841.1 1264567 D 351605 CDS YP_001229842.1 148263136 5163416 1268830..1269201 1 NC_009483.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 1269201 rpsL 5163416 rpsL Geobacter uraniireducens Rf4 30S ribosomal protein S12 YP_001229842.1 1268830 D 351605 CDS YP_001229843.1 148263137 5162888 1269224..1269694 1 NC_009483.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 1269694 5162888 Gura_1064 Geobacter uraniireducens Rf4 30S ribosomal protein S7 YP_001229843.1 1269224 D 351605 CDS YP_001229844.1 148263138 5162889 1269727..1271805 1 NC_009483.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1271805 5162889 Gura_1065 Geobacter uraniireducens Rf4 elongation factor G YP_001229844.1 1269727 D 351605 CDS YP_001229845.1 148263139 5162890 1271835..1273025 1 NC_009483.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1273025 5162890 Gura_1066 Geobacter uraniireducens Rf4 elongation factor Tu YP_001229845.1 1271835 D 351605 CDS YP_001229846.1 148263140 5166004 1273383..1274018 1 NC_009483.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1274018 rplC 5166004 rplC Geobacter uraniireducens Rf4 50S ribosomal protein L3 YP_001229846.1 1273383 D 351605 CDS YP_001229847.1 148263141 5166005 1274040..1274663 1 NC_009483.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1274663 rplD 5166005 rplD Geobacter uraniireducens Rf4 50S ribosomal protein L4 YP_001229847.1 1274040 D 351605 CDS YP_001229848.1 148263142 5166006 1274660..1274944 1 NC_009483.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1274944 rplW 5166006 rplW Geobacter uraniireducens Rf4 50S ribosomal protein L23 YP_001229848.1 1274660 D 351605 CDS YP_001229849.1 148263143 5166040 1274967..1275791 1 NC_009483.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1275791 rplB 5166040 rplB Geobacter uraniireducens Rf4 50S ribosomal protein L2 YP_001229849.1 1274967 D 351605 CDS YP_001229850.1 148263144 5166041 1275822..1276103 1 NC_009483.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1276103 rpsS 5166041 rpsS Geobacter uraniireducens Rf4 30S ribosomal protein S19 YP_001229850.1 1275822 D 351605 CDS YP_001229851.1 148263145 5166042 1276123..1276458 1 NC_009483.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1276458 rplV 5166042 rplV Geobacter uraniireducens Rf4 50S ribosomal protein L22 YP_001229851.1 1276123 D 351605 CDS YP_001229852.1 148263146 5166037 1276482..1277114 1 NC_009483.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 1277114 rpsC 5166037 rpsC Geobacter uraniireducens Rf4 30S ribosomal protein S3 YP_001229852.1 1276482 D 351605 CDS YP_001229853.1 148263147 5166038 1277136..1277558 1 NC_009483.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1277558 rplP 5166038 rplP Geobacter uraniireducens Rf4 50S ribosomal protein L16 YP_001229853.1 1277136 D 351605 CDS YP_003856783.1 304359809 9711824 1277548..1277736 1 NC_009483.1 50S ribosomal protein L29 1277736 9711824 Gura_4500 Geobacter uraniireducens Rf4 50S ribosomal protein L29 YP_003856783.1 1277548 D 351605 CDS YP_001229854.1 148263148 5166039 1277696..1278004 1 NC_009483.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 1278004 rpsQ 5166039 rpsQ Geobacter uraniireducens Rf4 30S ribosomal protein S17 YP_001229854.1 1277696 D 351605 CDS YP_001229855.1 148263149 5166295 1278018..1278386 1 NC_009483.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 1278386 rplN 5166295 rplN Geobacter uraniireducens Rf4 50S ribosomal protein L14 YP_001229855.1 1278018 D 351605 CDS YP_001229856.1 148263150 5166296 1278404..1278733 1 NC_009483.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1278733 rplX 5166296 rplX Geobacter uraniireducens Rf4 50S ribosomal protein L24 YP_001229856.1 1278404 D 351605 CDS YP_001229857.1 148263151 5166297 1278747..1279286 1 NC_009483.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1279286 rplE 5166297 rplE Geobacter uraniireducens Rf4 50S ribosomal protein L5 YP_001229857.1 1278747 D 351605 CDS YP_001229858.1 148263152 5165694 1279305..1279490 1 NC_009483.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 1279490 rpsN 5165694 rpsN Geobacter uraniireducens Rf4 30S ribosomal protein S14 YP_001229858.1 1279305 D 351605 CDS YP_001229859.1 148263153 5165695 1279525..1279923 1 NC_009483.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1279923 rpsH 5165695 rpsH Geobacter uraniireducens Rf4 30S ribosomal protein S8 YP_001229859.1 1279525 D 351605 CDS YP_001229860.1 148263154 5165696 1279951..1280490 1 NC_009483.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1280490 rplF 5165696 rplF Geobacter uraniireducens Rf4 50S ribosomal protein L6 YP_001229860.1 1279951 D 351605 CDS YP_001229861.1 148263155 5165637 1280512..1280880 1 NC_009483.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1280880 rplR 5165637 rplR Geobacter uraniireducens Rf4 50S ribosomal protein L18 YP_001229861.1 1280512 D 351605 CDS YP_001229862.1 148263156 5165638 1280904..1281392 1 NC_009483.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1281392 rpsE 5165638 rpsE Geobacter uraniireducens Rf4 30S ribosomal protein S5 YP_001229862.1 1280904 D 351605 CDS YP_001229863.1 148263157 5165639 1281422..1281601 1 NC_009483.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 1281601 rpmD 5165639 rpmD Geobacter uraniireducens Rf4 50S ribosomal protein L30 YP_001229863.1 1281422 D 351605 CDS YP_001229864.1 148263158 5165380 1281619..1282059 1 NC_009483.1 late assembly protein; 50S ribosomal protein L15 1282059 rplO 5165380 rplO Geobacter uraniireducens Rf4 50S ribosomal protein L15 YP_001229864.1 1281619 D 351605 CDS YP_001229865.1 148263159 5165381 1282062..1283369 1 NC_009483.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1283369 secY 5165381 secY Geobacter uraniireducens Rf4 preprotein translocase subunit SecY YP_001229865.1 1282062 D 351605 CDS YP_001229866.1 148263160 5165382 1283388..1284041 1 NC_009483.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1284041 adk 5165382 adk Geobacter uraniireducens Rf4 adenylate kinase YP_001229866.1 1283388 D 351605 CDS YP_001229867.1 148263161 5163493 1284074..1284784 1 NC_009483.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase 1284784 5163493 Gura_1088 Geobacter uraniireducens Rf4 methionine aminopeptidase YP_001229867.1 1284074 D 351605 CDS YP_001229868.1 148263162 5163494 1284964..1285332 1 NC_009483.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1285332 rpsM 5163494 rpsM Geobacter uraniireducens Rf4 30S ribosomal protein S13 YP_001229868.1 1284964 D 351605 CDS YP_001229869.1 148263163 5163495 1285355..1285750 1 NC_009483.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1285750 5163495 Gura_1090 Geobacter uraniireducens Rf4 30S ribosomal protein S11 YP_001229869.1 1285355 D 351605 CDS YP_001229870.1 148263164 5162997 1285783..1286409 1 NC_009483.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1286409 rpsD 5162997 rpsD Geobacter uraniireducens Rf4 30S ribosomal protein S4 YP_001229870.1 1285783 D 351605 CDS YP_001229871.1 148263165 5162998 1286444..1287466 1 NC_009483.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1287466 5162998 Gura_1092 Geobacter uraniireducens Rf4 DNA-directed RNA polymerase subunit alpha YP_001229871.1 1286444 D 351605 CDS YP_001229872.1 148263166 5162999 1287502..1288056 1 NC_009483.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1288056 rplQ 5162999 rplQ Geobacter uraniireducens Rf4 50S ribosomal protein L17 YP_001229872.1 1287502 D 351605 CDS YP_001229873.1 148263167 5163292 1288230..1291760 1 NC_009483.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; chromosome segregation protein SMC 1291760 5163292 Gura_1094 Geobacter uraniireducens Rf4 chromosome segregation protein SMC YP_001229873.1 1288230 D 351605 CDS YP_001229874.1 148263168 5163293 1291829..1292188 1 NC_009483.1 PFAM: Roadblock/LC7 family protein; roadblock/LC7 family protein 1292188 5163293 Gura_1095 Geobacter uraniireducens Rf4 roadblock/LC7 family protein YP_001229874.1 1291829 D 351605 CDS YP_001229875.1 148263169 5163294 1292189..1293211 1 NC_009483.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 1293211 5163294 Gura_1096 Geobacter uraniireducens Rf4 signal recognition particle-docking protein FtsY YP_001229875.1 1292189 D 351605 CDS YP_001229876.1 148263170 5162921 1293230..1293466 1 NC_009483.1 hypothetical protein 1293466 5162921 Gura_1097 Geobacter uraniireducens Rf4 hypothetical protein YP_001229876.1 1293230 D 351605 CDS YP_001229877.1 148263171 5162922 1293463..1293744 1 NC_009483.1 hypothetical protein 1293744 5162922 Gura_1098 Geobacter uraniireducens Rf4 hypothetical protein YP_001229877.1 1293463 D 351605 CDS YP_001229878.1 148263172 5162923 1294078..1294635 1 NC_009483.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 1294635 5162923 Gura_1099 Geobacter uraniireducens Rf4 5-formyltetrahydrofolate cyclo-ligase YP_001229878.1 1294078 D 351605 CDS YP_001229879.1 148263173 5162991 1294667..1296232 1 NC_009483.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1296232 5162991 Gura_1100 Geobacter uraniireducens Rf4 phosphodiesterase YP_001229879.1 1294667 D 351605 CDS YP_001229880.1 148263174 5162992 1296222..1297010 1 NC_009483.1 PFAM: metallophosphoesterase; metallophosphoesterase 1297010 5162992 Gura_1101 Geobacter uraniireducens Rf4 metallophosphoesterase YP_001229880.1 1296222 D 351605 CDS YP_001229881.1 148263175 5162993 1297150..1298361 1 NC_009483.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 1298361 5162993 Gura_1102 Geobacter uraniireducens Rf4 tyrosyl-tRNA synthetase YP_001229881.1 1297150 D 351605 CDS YP_001229882.1 148263176 5162709 1298552..1298782 1 NC_009483.1 hypothetical protein 1298782 5162709 Gura_1103 Geobacter uraniireducens Rf4 hypothetical protein YP_001229882.1 1298552 D 351605 CDS YP_001229883.1 148263177 5162710 1299011..1299574 1 NC_009483.1 hypothetical protein 1299574 5162710 Gura_1104 Geobacter uraniireducens Rf4 hypothetical protein YP_001229883.1 1299011 D 351605 CDS YP_001229884.1 148263178 5162711 1299680..1300960 1 NC_009483.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 1300960 5162711 Gura_1105 Geobacter uraniireducens Rf4 integrase catalytic subunit YP_001229884.1 1299680 D 351605 CDS YP_001229885.1 148263179 5163156 1300960..1301787 1 NC_009483.1 SMART: AAA ATPase; ATPase AAA 1301787 5163156 Gura_1106 Geobacter uraniireducens Rf4 ATPase AAA YP_001229885.1 1300960 D 351605 CDS YP_001229886.1 148263180 5163157 1301784..1301954 1 NC_009483.1 hypothetical protein 1301954 5163157 Gura_1107 Geobacter uraniireducens Rf4 hypothetical protein YP_001229886.1 1301784 D 351605 CDS YP_001229887.1 148263181 5163620 1302185..1302478 1 NC_009483.1 hypothetical protein 1302478 5163620 Gura_1108 Geobacter uraniireducens Rf4 hypothetical protein YP_001229887.1 1302185 D 351605 CDS YP_001229888.1 148263182 5166865 1308144..1309169 1 NC_009483.1 hypothetical protein 1309169 5166865 Gura_1109 Geobacter uraniireducens Rf4 hypothetical protein YP_001229888.1 1308144 D 351605 CDS YP_001229889.1 148263183 5165479 1309377..1312625 1 NC_009483.1 PFAM: transcriptional activator domain; transcriptional activator domain-containing protein 1312625 5165479 Gura_1110 Geobacter uraniireducens Rf4 transcriptional activator domain-containing protein YP_001229889.1 1309377 D 351605 CDS YP_001229890.1 148263184 5165480 1312759..1313217 1 NC_009483.1 hypothetical protein 1313217 5165480 Gura_1111 Geobacter uraniireducens Rf4 hypothetical protein YP_001229890.1 1312759 D 351605 CDS YP_001229891.1 148263185 5165481 1313758..1315173 1 NC_009483.1 SMART: LamG domain protein jellyroll fold domain protein; LamG domain-containing protein 1315173 5165481 Gura_1112 Geobacter uraniireducens Rf4 LamG domain-containing protein YP_001229891.1 1313758 D 351605 CDS YP_001229892.1 148263186 5166140 1315233..1316135 1 NC_009483.1 hypothetical protein 1316135 5166140 Gura_1113 Geobacter uraniireducens Rf4 hypothetical protein YP_001229892.1 1315233 D 351605 CDS YP_001229893.1 148263187 5166141 1316270..1317241 1 NC_009483.1 hypothetical protein 1317241 5166141 Gura_1114 Geobacter uraniireducens Rf4 hypothetical protein YP_001229893.1 1316270 D 351605 CDS YP_001229894.1 148263188 5166142 1317243..1318916 1 NC_009483.1 hypothetical protein 1318916 5166142 Gura_1115 Geobacter uraniireducens Rf4 hypothetical protein YP_001229894.1 1317243 D 351605 CDS YP_001229895.1 148263189 5166180 1320634..1321191 1 NC_009483.1 hypothetical protein 1321191 5166180 Gura_1117 Geobacter uraniireducens Rf4 hypothetical protein YP_001229895.1 1320634 D 351605 CDS YP_001229896.1 148263190 5166181 1321262..1321453 1 NC_009483.1 hypothetical protein 1321453 5166181 Gura_1118 Geobacter uraniireducens Rf4 hypothetical protein YP_001229896.1 1321262 D 351605 CDS YP_001229897.1 148263191 5166367 1321688..1322518 1 NC_009483.1 hypothetical protein 1322518 5166367 Gura_1119 Geobacter uraniireducens Rf4 hypothetical protein YP_001229897.1 1321688 D 351605 CDS YP_001229898.1 148263192 5166368 complement(1322798..1323247) 1 NC_009483.1 hypothetical protein 1323247 5166368 Gura_1120 Geobacter uraniireducens Rf4 hypothetical protein YP_001229898.1 1322798 R 351605 CDS YP_001229899.1 148263193 5166369 complement(1323276..1323971) 1 NC_009483.1 PFAM: sugar fermentation stimulation protein; sugar fermentation stimulation protein 1323971 5166369 Gura_1121 Geobacter uraniireducens Rf4 sugar fermentation stimulation protein YP_001229899.1 1323276 R 351605 CDS YP_001229900.1 148263194 5166337 complement(1324027..1325304) 1 NC_009483.1 PFAM: nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase, large subunit 1325304 5166337 Gura_1122 Geobacter uraniireducens Rf4 nickel-dependent hydrogenase, large subunit YP_001229900.1 1324027 R 351605 CDS YP_001229901.1 148263195 5166338 complement(1325288..1326043) 1 NC_009483.1 PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase, 20 kDa subunit 1326043 5166338 Gura_1123 Geobacter uraniireducens Rf4 NADH ubiquinone oxidoreductase, 20 kDa subunit YP_001229901.1 1325288 R 351605 CDS YP_001229902.1 148263196 5166339 complement(1326040..1326888) 1 NC_009483.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD-binding subunit 1326888 5166339 Gura_1124 Geobacter uraniireducens Rf4 oxidoreductase FAD-binding subunit YP_001229902.1 1326040 R 351605 CDS YP_001229903.1 148263197 5166853 complement(1327093..1328076) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1328076 5166853 Gura_1125 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001229903.1 1327093 R 351605 CDS YP_001229904.1 148263198 5166854 complement(1328358..1329902) 1 NC_009483.1 PFAM: outer membrane efflux protein; outer membrane efflux protein 1329902 5166854 Gura_1126 Geobacter uraniireducens Rf4 outer membrane efflux protein YP_001229904.1 1328358 R 351605 CDS YP_001229905.1 148263199 5166855 complement(1329933..1331162) 1 NC_009483.1 PFAM: protein of unknown function DUF214; hypothetical protein 1331162 5166855 Gura_1127 Geobacter uraniireducens Rf4 hypothetical protein YP_001229905.1 1329933 R 351605 CDS YP_001229906.1 148263200 5166197 complement(1331159..1331884) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1331884 5166197 Gura_1128 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001229906.1 1331159 R 351605 CDS YP_001229907.1 148263201 5166198 complement(1331885..1333108) 1 NC_009483.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 1333108 5166198 Gura_1129 Geobacter uraniireducens Rf4 RND family efflux transporter MFP subunit YP_001229907.1 1331885 R 351605 CDS YP_001229908.1 148263202 5166199 complement(1333140..1333586) 1 NC_009483.1 PFAM: regulatory protein, MarR; MarR family transcriptional regulator 1333586 5166199 Gura_1130 Geobacter uraniireducens Rf4 MarR family transcriptional regulator YP_001229908.1 1333140 R 351605 CDS YP_001229909.1 148263203 5166155 1333806..1334402 1 NC_009483.1 PFAM: phosphoesterase, PA-phosphatase related; PA-phosphatase-like protein 1334402 5166155 Gura_1131 Geobacter uraniireducens Rf4 PA-phosphatase-like protein YP_001229909.1 1333806 D 351605 CDS YP_001229910.1 148263204 5166156 complement(1334448..1335674) 1 NC_009483.1 PFAM: UMUC domain protein DNA-repair protein; DNA-directed DNA polymerase 1335674 5166156 Gura_1132 Geobacter uraniireducens Rf4 DNA-directed DNA polymerase YP_001229910.1 1334448 R 351605 CDS YP_001229911.1 148263205 5166157 complement(1335679..1336050) 1 NC_009483.1 PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 1336050 5166157 Gura_1133 Geobacter uraniireducens Rf4 DNA polymerase subunit beta YP_001229911.1 1335679 R 351605 CDS YP_001229912.1 148263206 5165655 complement(1336040..1336459) 1 NC_009483.1 TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein, HI0074; nucleotidyltransferase substrate binding protein 1336459 5165655 Gura_1134 Geobacter uraniireducens Rf4 nucleotidyltransferase substrate binding protein YP_001229912.1 1336040 R 351605 CDS YP_001229913.1 148263207 5165657 1337269..1337502 1 NC_009483.1 PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 1337502 5165657 Gura_1136 Geobacter uraniireducens Rf4 helix-turn-helix domain-containing protein YP_001229913.1 1337269 D 351605 CDS YP_001229914.1 148263208 5165429 1337512..1337976 1 NC_009483.1 hypothetical protein 1337976 5165429 Gura_1137 Geobacter uraniireducens Rf4 hypothetical protein YP_001229914.1 1337512 D 351605 CDS YP_001229915.1 148263209 5165430 complement(1338288..1338689) 1 NC_009483.1 PFAM: PilT protein domain protein; PilT domain-containing protein 1338689 5165430 Gura_1138 Geobacter uraniireducens Rf4 PilT domain-containing protein YP_001229915.1 1338288 R 351605 CDS YP_001229916.1 148263210 5165431 complement(1339088..1339525) 1 NC_009483.1 SMART: Nucleotide binding protein, PINc; nucleotide binding protein, PINc 1339525 5165431 Gura_1139 Geobacter uraniireducens Rf4 nucleotide binding protein, PINc YP_001229916.1 1339088 R 351605 CDS YP_001229917.1 148263211 5165473 complement(1339529..1339795) 1 NC_009483.1 TIGRFAM: prevent-host-death family protein; prevent-host-death family protein 1339795 5165473 Gura_1140 Geobacter uraniireducens Rf4 prevent-host-death family protein YP_001229917.1 1339529 R 351605 CDS YP_001229918.1 148263212 5165474 complement(1339915..1340160) 1 NC_009483.1 hypothetical protein 1340160 5165474 Gura_1141 Geobacter uraniireducens Rf4 hypothetical protein YP_001229918.1 1339915 R 351605 CDS YP_001229919.1 148263213 5165475 complement(1340193..1340798) 1 NC_009483.1 TIGRFAM: LexA repressor; PFAM: peptidase S24, S26A and S26B; LexA DNA-binding domain protein; SOS-response transcriptional repressor LexA 1340798 5165475 Gura_1142 Geobacter uraniireducens Rf4 SOS-response transcriptional repressor LexA YP_001229919.1 1340193 R 351605 CDS YP_001229920.1 148263214 5165649 1340959..1342257 1 NC_009483.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; hypothetical protein 1342257 5165649 Gura_1143 Geobacter uraniireducens Rf4 hypothetical protein YP_001229920.1 1340959 D 351605 CDS YP_001229921.1 148263215 5165650 complement(1342349..1343281) 1 NC_009483.1 PFAM: Integral membrane protein TerC; integral membrane protein TerC 1343281 5165650 Gura_1144 Geobacter uraniireducens Rf4 integral membrane protein TerC YP_001229921.1 1342349 R 351605 CDS YP_001229922.1 148263216 5165651 complement(1343402..1344259) 1 NC_009483.1 PFAM: peptidase M48, Ste24p; peptidase M48, Ste24p 1344259 5165651 Gura_1145 Geobacter uraniireducens Rf4 peptidase M48, Ste24p YP_001229922.1 1343402 R 351605 CDS YP_001229923.1 148263217 5165183 complement(1344534..1345100) 1 NC_009483.1 PFAM: response regulator receiver; ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein 1345100 5165183 Gura_1146 Geobacter uraniireducens Rf4 response regulator receiver/ANTAR domain-containing protein YP_001229923.1 1344534 R 351605 CDS YP_001229924.1 148263218 5165184 1345234..1346220 1 NC_009483.1 PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein 1346220 5165184 Gura_1147 Geobacter uraniireducens Rf4 secretion protein HlyD family protein YP_001229924.1 1345234 D 351605 CDS YP_001229925.1 148263219 5165185 1346317..1347240 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1347240 5165185 Gura_1148 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001229925.1 1346317 D 351605 CDS YP_001229926.1 148263220 5164930 1347240..1348214 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1348214 5164930 Gura_1149 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001229926.1 1347240 D 351605 CDS YP_001229927.1 148263221 5164931 1348468..1349601 1 NC_009483.1 PFAM: ABC-2 type transporter; ABC-2 type transporter 1349601 5164931 Gura_1150 Geobacter uraniireducens Rf4 ABC-2 type transporter YP_001229927.1 1348468 D 351605 CDS YP_001229928.1 148263222 5164932 1349830..1350960 1 NC_009483.1 PFAM: ABC-2 type transporter; ABC-2 type transporter 1350960 5164932 Gura_1151 Geobacter uraniireducens Rf4 ABC-2 type transporter YP_001229928.1 1349830 D 351605 CDS YP_001229929.1 148263223 5164815 1351156..1352622 1 NC_009483.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; type IV pilus assembly PilZ; SMART: AAA ATPase; sigma-54 dependent trancsriptional regulator 1352622 5164815 Gura_1152 Geobacter uraniireducens Rf4 sigma-54 dependent trancsriptional regulator YP_001229929.1 1351156 D 351605 CDS YP_001229930.1 148263224 5164816 1352927..1353958 1 NC_009483.1 hypothetical protein 1353958 5164816 Gura_1153 Geobacter uraniireducens Rf4 hypothetical protein YP_001229930.1 1352927 D 351605 CDS YP_001229931.1 148263225 5164817 1354067..1354471 1 NC_009483.1 hypothetical protein 1354471 5164817 Gura_1154 Geobacter uraniireducens Rf4 hypothetical protein YP_001229931.1 1354067 D 351605 CDS YP_001229932.1 148263226 5164632 1354572..1355183 1 NC_009483.1 PFAM: peptidase C39, bacteriocin processing; peptidase C39, bacteriocin processing 1355183 5164632 Gura_1155 Geobacter uraniireducens Rf4 peptidase C39, bacteriocin processing YP_001229932.1 1354572 D 351605 CDS YP_001229933.1 148263227 5164633 1355180..1355695 1 NC_009483.1 hypothetical protein 1355695 5164633 Gura_1156 Geobacter uraniireducens Rf4 hypothetical protein YP_001229933.1 1355180 D 351605 CDS YP_001229934.1 148263228 5164634 complement(1355786..1356997) 1 NC_009483.1 hypothetical protein 1356997 5164634 Gura_1157 Geobacter uraniireducens Rf4 hypothetical protein YP_001229934.1 1355786 R 351605 CDS YP_001229935.1 148263229 5164723 1357708..1362261 1 NC_009483.1 TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; FG-GAP repeat protein; YD repeat-containing protein 1362261 5164723 Gura_1158 Geobacter uraniireducens Rf4 YD repeat-containing protein YP_001229935.1 1357708 D 351605 CDS YP_001229936.1 148263230 5164724 1362528..1363202 1 NC_009483.1 PFAM: OmpW family protein; OmpW family protein 1363202 5164724 Gura_1159 Geobacter uraniireducens Rf4 OmpW family protein YP_001229936.1 1362528 D 351605 CDS YP_001229937.1 148263231 5164725 1363840..1368813 1 NC_009483.1 hypothetical protein 1368813 5164725 Gura_1160 Geobacter uraniireducens Rf4 hypothetical protein YP_001229937.1 1363840 D 351605 CDS YP_001229938.1 148263232 5163511 1369345..1375053 1 NC_009483.1 hypothetical protein 1375053 5163511 Gura_1161 Geobacter uraniireducens Rf4 hypothetical protein YP_001229938.1 1369345 D 351605 CDS YP_001229939.1 148263233 5163512 1375162..1376469 1 NC_009483.1 hypothetical protein 1376469 5163512 Gura_1162 Geobacter uraniireducens Rf4 hypothetical protein YP_001229939.1 1375162 D 351605 CDS YP_001229940.1 148263234 5163513 complement(1376732..1377169) 1 NC_009483.1 hypothetical protein 1377169 5163513 Gura_1163 Geobacter uraniireducens Rf4 hypothetical protein YP_001229940.1 1376732 R 351605 CDS YP_001229941.1 148263235 5164951 complement(1377479..1377787) 1 NC_009483.1 hypothetical protein 1377787 5164951 Gura_1164 Geobacter uraniireducens Rf4 hypothetical protein YP_001229941.1 1377479 R 351605 CDS YP_001229942.1 148263236 5164952 1378008..1378325 1 NC_009483.1 PFAM: protein of unknown function YGGT; hypothetical protein 1378325 5164952 Gura_1165 Geobacter uraniireducens Rf4 hypothetical protein YP_001229942.1 1378008 D 351605 CDS YP_001229943.1 148263237 5164953 1378322..1378771 1 NC_009483.1 PFAM: DivIVA family protein; DivIVA family protein 1378771 5164953 Gura_1166 Geobacter uraniireducens Rf4 DivIVA family protein YP_001229943.1 1378322 D 351605 CDS YP_001229944.1 148263238 5164738 1378761..1379069 1 NC_009483.1 PFAM: protein of unknown function DUF167; hypothetical protein 1379069 5164738 Gura_1167 Geobacter uraniireducens Rf4 hypothetical protein YP_001229944.1 1378761 D 351605 CDS YP_001229945.1 148263239 5164739 1379244..1379492 1 NC_009483.1 TIGRFAM: putative regulatory protein, FmdB family; FmdB family regulatory protein 1379492 5164739 Gura_1168 Geobacter uraniireducens Rf4 FmdB family regulatory protein YP_001229945.1 1379244 D 351605 CDS YP_001229946.1 148263240 5164740 1379785..1380627 1 NC_009483.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; methylenetetrahydrofolate dehydrogenase 1380627 5164740 Gura_1169 Geobacter uraniireducens Rf4 methylenetetrahydrofolate dehydrogenase YP_001229946.1 1379785 D 351605 CDS YP_001229947.1 148263241 5164175 1380895..1381542 1 NC_009483.1 hypothetical protein 1381542 5164175 Gura_1170 Geobacter uraniireducens Rf4 hypothetical protein YP_001229947.1 1380895 D 351605 CDS YP_001229948.1 148263242 5164176 1381551..1382444 1 NC_009483.1 PFAM: methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase 1382444 5164176 Gura_1171 Geobacter uraniireducens Rf4 methylenetetrahydrofolate reductase YP_001229948.1 1381551 D 351605 CDS YP_001229949.1 148263243 5164177 1382577..1383458 1 NC_009483.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase GalU 1383458 5164177 Gura_1172 Geobacter uraniireducens Rf4 UTP-glucose-1-phosphate uridylyltransferase GalU YP_001229949.1 1382577 D 351605 CDS YP_001229950.1 148263244 5163058 complement(1383505..1384353) 1 NC_009483.1 TIGRFAM: TonB family protein; TonB family protein 1384353 5163058 Gura_1173 Geobacter uraniireducens Rf4 TonB family protein YP_001229950.1 1383505 R 351605 CDS YP_001229951.1 148263245 5163059 complement(1384443..1385033) 1 NC_009483.1 PFAM: protein of unknown function UPF0016; hypothetical protein 1385033 5163059 Gura_1174 Geobacter uraniireducens Rf4 hypothetical protein YP_001229951.1 1384443 R 351605 CDS YP_001229952.1 148263246 5163060 1385423..1386292 1 NC_009483.1 TIGRFAM: nitrogenase iron protein; PFAM: NifH/frxC-family protein; nitrogenase iron protein 1386292 5163060 Gura_1175 Geobacter uraniireducens Rf4 nitrogenase iron protein YP_001229952.1 1385423 D 351605 CDS YP_001229953.1 148263247 5163919 1386379..1387818 1 NC_009483.1 TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase, component 1; nitrogenase molybdenum-iron protein subunit alpha 1387818 5163919 Gura_1176 Geobacter uraniireducens Rf4 nitrogenase molybdenum-iron protein subunit alpha YP_001229953.1 1386379 D 351605 CDS YP_001229954.1 148263248 5163920 1387961..1389424 1 NC_009483.1 TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase, component 1; nitrogenase molybdenum-iron protein subunit beta 1389424 5163920 Gura_1177 Geobacter uraniireducens Rf4 nitrogenase molybdenum-iron protein subunit beta YP_001229954.1 1387961 D 351605 CDS YP_001229955.1 148263249 5164220 1389969..1390310 1 NC_009483.1 hypothetical protein 1390310 5164220 Gura_1178 Geobacter uraniireducens Rf4 hypothetical protein YP_001229955.1 1389969 D 351605 CDS YP_001229956.1 148263250 5164221 1390316..1391692 1 NC_009483.1 hypothetical protein 1391692 5164221 Gura_1179 Geobacter uraniireducens Rf4 hypothetical protein YP_001229956.1 1390316 D 351605 CDS YP_001229957.1 148263251 5164222 1391931..1392995 1 NC_009483.1 virulence protein-like protein 1392995 5164222 Gura_1180 Geobacter uraniireducens Rf4 virulence protein-like protein YP_001229957.1 1391931 D 351605 CDS YP_001229958.1 148263252 5163747 1393103..1393816 1 NC_009483.1 hypothetical protein 1393816 5163747 Gura_1181 Geobacter uraniireducens Rf4 hypothetical protein YP_001229958.1 1393103 D 351605 CDS YP_001229959.1 148263253 5163748 complement(1393923..1395458) 1 NC_009483.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA family drug resistance transporter 1395458 5163748 Gura_1182 Geobacter uraniireducens Rf4 EmrB/QacA family drug resistance transporter YP_001229959.1 1393923 R 351605 CDS YP_001229960.1 148263254 5163749 complement(1395467..1396531) 1 NC_009483.1 PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein 1396531 5163749 Gura_1183 Geobacter uraniireducens Rf4 secretion protein HlyD family protein YP_001229960.1 1395467 R 351605 CDS YP_001229961.1 148263255 5164160 complement(1396783..1397739) 1 NC_009483.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1397739 5164160 Gura_1184 Geobacter uraniireducens Rf4 oligopeptide/dipeptide ABC transporter ATPase YP_001229961.1 1396783 R 351605 CDS YP_001229962.1 148263256 5164161 complement(1397935..1398921) 1 NC_009483.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1398921 5164161 Gura_1185 Geobacter uraniireducens Rf4 oligopeptide/dipeptide ABC transporter ATPase YP_001229962.1 1397935 R 351605 CDS YP_001229963.1 148263257 5164162 complement(1398918..1399739) 1 NC_009483.1 PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 1399739 5164162 Gura_1186 Geobacter uraniireducens Rf4 binding-protein-dependent transport systems inner membrane component YP_001229963.1 1398918 R 351605 CDS YP_001229964.1 148263258 5163043 complement(1399732..1400685) 1 NC_009483.1 PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 1400685 5163043 Gura_1187 Geobacter uraniireducens Rf4 binding-protein-dependent transport systems inner membrane component YP_001229964.1 1399732 R 351605 CDS YP_001229965.1 148263259 5163044 complement(1401063..1401437) 1 NC_009483.1 PFAM: protein of unknown function DUF559; hypothetical protein 1401437 5163044 Gura_1188 Geobacter uraniireducens Rf4 hypothetical protein YP_001229965.1 1401063 R 351605 CDS YP_001229966.1 148263260 5163045 complement(1401617..1403188) 1 NC_009483.1 PFAM: extracellular solute-binding protein, family 5; 4-phytase 1403188 5163045 Gura_1189 Geobacter uraniireducens Rf4 4-phytase YP_001229966.1 1401617 R 351605 CDS YP_001229967.1 148263261 5163224 complement(1403276..1403887) 1 NC_009483.1 PFAM: regulatory protein, TetR; TetR family transcriptional regulator 1403887 5163224 Gura_1190 Geobacter uraniireducens Rf4 TetR family transcriptional regulator YP_001229967.1 1403276 R 351605 CDS YP_001229968.1 148263262 5163225 complement(1404295..1406835) 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; SMART: PAS domain containing protein; methyl-accepting chemotaxis sensory transducer 1406835 5163225 Gura_1191 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001229968.1 1404295 R 351605 CDS YP_001229969.1 148263263 5163226 complement(1407140..1407562) 1 NC_009483.1 PFAM: beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin 1407562 5163226 Gura_1192 Geobacter uraniireducens Rf4 beta-Ig-H3/fasciclin YP_001229969.1 1407140 R 351605 CDS YP_001229970.1 148263264 5163632 complement(1407611..1408456) 1 NC_009483.1 PFAM: UBA/THIF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 1408456 5163632 Gura_1193 Geobacter uraniireducens Rf4 UBA/THIF-type NAD/FAD binding protein YP_001229970.1 1407611 R 351605 CDS YP_001229971.1 148263265 5163633 complement(1408458..1408682) 1 NC_009483.1 PFAM: thiamineS protein; sulfur transfer protein ThiS 1408682 5163633 Gura_1194 Geobacter uraniireducens Rf4 sulfur transfer protein ThiS YP_001229971.1 1408458 R 351605 CDS YP_001229972.1 148263266 5163634 complement(1408698..1410428) 1 NC_009483.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase-like; aldehyde ferredoxin oxidoreductase 1410428 5163634 Gura_1195 Geobacter uraniireducens Rf4 aldehyde ferredoxin oxidoreductase YP_001229972.1 1408698 R 351605 CDS YP_001229973.1 148263267 5163209 complement(1410449..1411612) 1 NC_009483.1 PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1411612 5163209 Gura_1196 Geobacter uraniireducens Rf4 iron-containing alcohol dehydrogenase YP_001229973.1 1410449 R 351605 CDS YP_001229974.1 148263268 5163210 complement(1411953..1412576) 1 NC_009483.1 PFAM: isochorismatase hydrolase; isochorismatase hydrolase 1412576 5163210 Gura_1197 Geobacter uraniireducens Rf4 isochorismatase hydrolase YP_001229974.1 1411953 R 351605 CDS YP_001229975.1 148263269 5163211 1412746..1413636 1 NC_009483.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator 1413636 5163211 Gura_1198 Geobacter uraniireducens Rf4 LysR family transcriptional regulator YP_001229975.1 1412746 D 351605 CDS YP_001229976.1 148263270 5163244 complement(1413699..1414094) 1 NC_009483.1 PFAM: HEPN domain protein; HEPN domain-containing protein 1414094 5163244 Gura_1199 Geobacter uraniireducens Rf4 HEPN domain-containing protein YP_001229976.1 1413699 R 351605 CDS YP_001229977.1 148263271 5163245 complement(1414091..1414426) 1 NC_009483.1 PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 1414426 5163245 Gura_1200 Geobacter uraniireducens Rf4 DNA polymerase subunit beta YP_001229977.1 1414091 R 351605 CDS YP_001229978.1 148263272 5163246 1414832..1417585 1 NC_009483.1 in some organisms the NifE and NifN proteins are encoded separately; functions in assembly of FeMo cofactor; functions in assembly of nitrogenase MoFe; bifunctional nitrogenase molybdenum-cofactor biosynthesis protein NifE/NifN 1417585 5163246 Gura_1201 Geobacter uraniireducens Rf4 bifunctional nitrogenase molybdenum-cofactor biosynthesis protein NifE/NifN YP_001229978.1 1414832 D 351605 CDS YP_001229979.1 148263273 5163457 1417809..1418195 1 NC_009483.1 TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; nitrogen fixation protein NifX 1418195 5163457 Gura_1202 Geobacter uraniireducens Rf4 nitrogen fixation protein NifX YP_001229979.1 1417809 D 351605 CDS YP_001229980.1 148263274 5163458 1418263..1418526 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1418526 5163458 Gura_1203 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001229980.1 1418263 D 351605 CDS YP_001229981.1 148263275 5163459 1418680..1419009 1 NC_009483.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein 1419009 5163459 Gura_1204 Geobacter uraniireducens Rf4 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_001229981.1 1418680 D 351605 CDS YP_001229982.1 148263276 5162721 1419041..1419877 1 NC_009483.1 PFAM: Dinitrogenase reductase ADP-ribosyltransferase; NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase 1419877 5162721 Gura_1205 Geobacter uraniireducens Rf4 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase YP_001229982.1 1419041 D 351605 CDS YP_001229983.1 148263277 5162722 1420206..1420793 1 NC_009483.1 hypothetical protein 1420793 5162722 Gura_1206 Geobacter uraniireducens Rf4 hypothetical protein YP_001229983.1 1420206 D 351605 CDS YP_001229984.1 148263278 5162723 1421037..1422575 1 NC_009483.1 hypothetical protein 1422575 5162723 Gura_1207 Geobacter uraniireducens Rf4 hypothetical protein YP_001229984.1 1421037 D 351605 CDS YP_001229985.1 148263279 5164536 complement(1422627..1423658) 1 NC_009483.1 TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase; PFAM: ADP-ribosylation/Crystallin J1; ADP-ribosyl-(dinitrogen reductase) hydrolase 1423658 5164536 Gura_1208 Geobacter uraniireducens Rf4 ADP-ribosyl-(dinitrogen reductase) hydrolase YP_001229985.1 1422627 R 351605 CDS YP_001229986.1 148263280 5164537 1424064..1424930 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 1424930 5164537 Gura_1209 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001229986.1 1424064 D 351605 CDS YP_001229987.1 148263281 5164538 1425121..1425930 1 NC_009483.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1425930 5164538 Gura_1210 Geobacter uraniireducens Rf4 N-acetyltransferase GCN5 YP_001229987.1 1425121 D 351605 CDS YP_001229988.1 148263282 5162685 1426276..1427088 1 NC_009483.1 PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta 1427088 5162685 Gura_1211 Geobacter uraniireducens Rf4 electron transfer flavoprotein subunit beta YP_001229988.1 1426276 D 351605 CDS YP_001229989.1 148263283 5162686 1427264..1428589 1 NC_009483.1 PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; electron transfer flavoprotein subunit alpha 1428589 5162686 Gura_1212 Geobacter uraniireducens Rf4 electron transfer flavoprotein subunit alpha YP_001229989.1 1427264 D 351605 CDS YP_001229990.1 148263284 5162687 1428818..1430803 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 1430803 5162687 Gura_1213 Geobacter uraniireducens Rf4 hypothetical protein YP_001229990.1 1428818 D 351605 CDS YP_001229991.1 148263285 5166790 1430894..1431583 1 NC_009483.1 PFAM: glutamine amidotransferase class-I; glutamine amidotransferase 1431583 5166790 Gura_1214 Geobacter uraniireducens Rf4 glutamine amidotransferase YP_001229991.1 1430894 D 351605 CDS YP_001229992.1 148263286 5166791 1431721..1432002 1 NC_009483.1 PFAM: plasmid maintenance system killer; plasmid maintenance system killer protein 1432002 5166791 Gura_1215 Geobacter uraniireducens Rf4 plasmid maintenance system killer protein YP_001229992.1 1431721 D 351605 CDS YP_001229993.1 148263287 5166792 1432013..1432318 1 NC_009483.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; XRE family plasmid maintenance system antidote protein 1432318 5166792 Gura_1216 Geobacter uraniireducens Rf4 XRE family plasmid maintenance system antidote protein YP_001229993.1 1432013 D 351605 CDS YP_001229994.1 148263288 5163928 1434050..1434916 1 NC_009483.1 PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding; transcription activator, effector binding 1434916 5163928 Gura_1217 Geobacter uraniireducens Rf4 transcription activator, effector binding YP_001229994.1 1434050 D 351605 CDS YP_001229995.1 148263289 5163929 complement(1435232..1435633) 1 NC_009483.1 PFAM: CopG domain protein DNA-binding domain protein; protein of unknown function UPF0150; hypothetical protein 1435633 5163929 Gura_1218 Geobacter uraniireducens Rf4 hypothetical protein YP_001229995.1 1435232 R 351605 CDS YP_001229996.1 148263290 5163930 complement(1436011..1438290) 1 NC_009483.1 PFAM: glycosyl hydrolase, BNR repeat-containing protein; metallophosphoesterase; metallophosphoesterase 1438290 5163930 Gura_1219 Geobacter uraniireducens Rf4 metallophosphoesterase YP_001229996.1 1436011 R 351605 CDS YP_001229997.1 148263291 5164187 1438690..1440144 1 NC_009483.1 PFAM: ribonuclease H; 5'-3' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2; ribonuclease H 1440144 5164187 Gura_1220 Geobacter uraniireducens Rf4 ribonuclease H YP_001229997.1 1438690 D 351605 CDS YP_001229998.1 148263292 5164188 complement(1440161..1442074) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 1442074 5164188 Gura_1221 Geobacter uraniireducens Rf4 PAS/PAC sensor signal transduction histidine kinase YP_001229998.1 1440161 R 351605 CDS YP_001229999.1 148263293 5164189 complement(1442250..1442957) 1 NC_009483.1 PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 1442957 5164189 Gura_1222 Geobacter uraniireducens Rf4 two component transcriptional regulator YP_001229999.1 1442250 R 351605 CDS YP_001230000.1 148263294 5166034 1443673..1444977 1 NC_009483.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 1444977 5166034 Gura_1223 Geobacter uraniireducens Rf4 RNA-directed DNA polymerase YP_001230000.1 1443673 D 351605 CDS YP_001230001.1 148263295 5166035 complement(1445212..1447881) 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Osmosensitive K+ channel His kinase sensor; UspA domain protein; osmosensitive K+ channel signal transduction histidine kinase 1447881 5166035 Gura_1224 Geobacter uraniireducens Rf4 osmosensitive K+ channel signal transduction histidine kinase YP_001230001.1 1445212 R 351605 CDS YP_001230002.1 148263296 5166036 complement(1447878..1448447) 1 NC_009483.1 TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K+ transporting ATPase, KdpC subunit; potassium-transporting ATPase subunit C 1448447 5166036 Gura_1225 Geobacter uraniireducens Rf4 potassium-transporting ATPase subunit C YP_001230002.1 1447878 R 351605 CDS YP_001230003.1 148263297 5166238 complement(1448552..1450618) 1 NC_009483.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; K+-transporting ATPase B 1450618 5166238 Gura_1226 Geobacter uraniireducens Rf4 K+-transporting ATPase B YP_001230003.1 1448552 R 351605 CDS YP_001230004.1 148263298 5166239 complement(1450797..1452575) 1 NC_009483.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase A 1452575 5166239 Gura_1227 Geobacter uraniireducens Rf4 potassium-transporting ATPase A YP_001230004.1 1450797 R 351605 CDS YP_001230005.1 148263299 5166240 1452862..1453347 1 NC_009483.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Contains selenocysteine; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1453347 5166240 Gura_1228 Geobacter uraniireducens Rf4 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_001230005.1 1452862 D 351605 CDS YP_001230006.1 148263300 5166218 1453499..1454056 1 NC_009483.1 PFAM: DTW domain containing protein; DTW domain-containing protein 1454056 5166218 Gura_1229 Geobacter uraniireducens Rf4 DTW domain-containing protein YP_001230006.1 1453499 D 351605 CDS YP_001230007.1 148263301 5166219 1454988..1455401 1 NC_009483.1 hypothetical protein 1455401 5166219 Gura_1230 Geobacter uraniireducens Rf4 hypothetical protein YP_001230007.1 1454988 D 351605 CDS YP_001230008.1 148263302 5166220 1455720..1456154 1 NC_009483.1 hypothetical protein 1456154 5166220 Gura_1231 Geobacter uraniireducens Rf4 hypothetical protein YP_001230008.1 1455720 D 351605 CDS YP_001230009.1 148263303 5166760 1456154..1457152 1 NC_009483.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 1457152 5166760 Gura_1232 Geobacter uraniireducens Rf4 integrase catalytic subunit YP_001230009.1 1456154 D 351605 CDS YP_001230010.1 148263304 5166761 complement(1457523..1458152) 1 NC_009483.1 hypothetical protein 1458152 5166761 Gura_1233 Geobacter uraniireducens Rf4 hypothetical protein YP_001230010.1 1457523 R 351605 CDS YP_001230011.1 148263305 5166762 1459128..1460447 1 NC_009483.1 hypothetical protein 1460447 5166762 Gura_1234 Geobacter uraniireducens Rf4 hypothetical protein YP_001230011.1 1459128 D 351605 CDS YP_001230012.1 148263306 5165727 complement(1460969..1462564) 1 NC_009483.1 hypothetical protein 1462564 5165727 Gura_1235 Geobacter uraniireducens Rf4 hypothetical protein YP_001230012.1 1460969 R 351605 CDS YP_001230013.1 148263307 5165728 complement(1462589..1462915) 1 NC_009483.1 hypothetical protein 1462915 5165728 Gura_1236 Geobacter uraniireducens Rf4 hypothetical protein YP_001230013.1 1462589 R 351605 CDS YP_001230014.1 148263308 5165729 complement(1462966..1464852) 1 NC_009483.1 TIGRFAM: YD repeat protein; YD repeat-containing protein 1464852 5165729 Gura_1237 Geobacter uraniireducens Rf4 YD repeat-containing protein YP_001230014.1 1462966 R 351605 CDS YP_001230015.1 148263309 5165145 complement(1464976..1466001) 1 NC_009483.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 1466001 5165145 Gura_1238 Geobacter uraniireducens Rf4 integrase catalytic subunit YP_001230015.1 1464976 R 351605 CDS YP_001230016.1 148263310 5165146 complement(1465998..1466531) 1 NC_009483.1 hypothetical protein 1466531 5165146 Gura_1239 Geobacter uraniireducens Rf4 hypothetical protein YP_001230016.1 1465998 R 351605 CDS YP_001230017.1 148263311 5165147 complement(1466680..1470666) 1 NC_009483.1 TIGRFAM: YD repeat protein; YD repeat-containing protein 1470666 5165147 Gura_1240 Geobacter uraniireducens Rf4 YD repeat-containing protein YP_001230017.1 1466680 R 351605 CDS YP_001230018.1 148263312 5165733 complement(1471163..1471723) 1 NC_009483.1 PFAM: nitroreductase; nitroreductase 1471723 5165733 Gura_1241 Geobacter uraniireducens Rf4 nitroreductase YP_001230018.1 1471163 R 351605 CDS YP_001230019.1 148263313 5165734 complement(1471764..1472756) 1 NC_009483.1 hypothetical protein 1472756 5165734 Gura_1242 Geobacter uraniireducens Rf4 hypothetical protein YP_001230019.1 1471764 R 351605 CDS YP_001230020.1 148263314 5165735 complement(1472908..1473990) 1 NC_009483.1 PFAM: Mammalian cell entry related domain protein; hypothetical protein 1473990 5165735 Gura_1243 Geobacter uraniireducens Rf4 hypothetical protein YP_001230020.1 1472908 R 351605 CDS YP_001230021.1 148263315 5164687 complement(1473987..1474745) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1474745 5164687 Gura_1244 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001230021.1 1473987 R 351605 CDS YP_001230022.1 148263316 5164688 complement(1475010..1475783) 1 NC_009483.1 PFAM: protein of unknown function DUF140; hypothetical protein 1475783 5164688 Gura_1245 Geobacter uraniireducens Rf4 hypothetical protein YP_001230022.1 1475010 R 351605 CDS YP_001230023.1 148263317 5164689 complement(1475790..1478108) 1 NC_009483.1 TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La 1478108 5164689 Gura_1246 Geobacter uraniireducens Rf4 ATP-dependent protease La YP_001230023.1 1475790 R 351605 CDS YP_001230024.1 148263318 5165640 complement(1478178..1480115) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1480115 5165640 Gura_1247 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001230024.1 1478178 R 351605 CDS YP_001230025.1 148263319 5165641 complement(1480200..1480601) 1 NC_009483.1 PFAM: plasmid stabilization system; plasmid stabilization system protein 1480601 5165641 Gura_1248 Geobacter uraniireducens Rf4 plasmid stabilization system protein YP_001230025.1 1480200 R 351605 CDS YP_001230026.1 148263320 5165642 complement(1480592..1480957) 1 NC_009483.1 transcriptional regulator-like protein 1480957 5165642 Gura_1249 Geobacter uraniireducens Rf4 transcriptional regulator-like protein YP_001230026.1 1480592 R 351605 CDS YP_001230027.1 148263321 5165415 complement(1481220..1481558) 1 NC_009483.1 PFAM: HNH endonuclease; HNH endonuclease 1481558 5165415 Gura_1250 Geobacter uraniireducens Rf4 HNH endonuclease YP_001230027.1 1481220 R 351605 CDS YP_001230028.1 148263322 5165416 complement(1481585..1481899) 1 NC_009483.1 hypothetical protein 1481899 5165416 Gura_1251 Geobacter uraniireducens Rf4 hypothetical protein YP_001230028.1 1481585 R 351605 CDS YP_001230029.1 148263323 5165417 complement(1481899..1482180) 1 NC_009483.1 PFAM: Post-segregation antitoxin CcdA; post-segregation antitoxin CcdA 1482180 5165417 Gura_1252 Geobacter uraniireducens Rf4 post-segregation antitoxin CcdA YP_001230029.1 1481899 R 351605 CDS YP_001230030.1 148263324 5165395 complement(1482220..1482624) 1 NC_009483.1 PFAM: RNP-1 like RNA-binding protein; RNP-1 like RNA-binding protein 1482624 5165395 Gura_1253 Geobacter uraniireducens Rf4 RNP-1 like RNA-binding protein YP_001230030.1 1482220 R 351605 CDS YP_001230031.1 148263325 5165396 complement(1482685..1483170) 1 NC_009483.1 PFAM: DTW domain containing protein; DTW domain-containing protein 1483170 5165396 Gura_1254 Geobacter uraniireducens Rf4 DTW domain-containing protein YP_001230031.1 1482685 R 351605 CDS YP_001230032.1 148263326 5165318 complement(1483167..1483403) 1 NC_009483.1 hypothetical protein 1483403 5165318 Gura_1255 Geobacter uraniireducens Rf4 hypothetical protein YP_001230032.1 1483167 R 351605 CDS YP_001230033.1 148263327 5165319 1483775..1486153 1 NC_009483.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; ribonuclease 1486153 5165319 Gura_1256 Geobacter uraniireducens Rf4 ribonuclease YP_001230033.1 1483775 D 351605 CDS YP_001230034.1 148263328 5165320 1486200..1487027 1 NC_009483.1 hypothetical protein 1487027 5165320 Gura_1257 Geobacter uraniireducens Rf4 hypothetical protein YP_001230034.1 1486200 D 351605 CDS YP_001230035.1 148263329 5165202 1487045..1487419 1 NC_009483.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 1487419 5165202 Gura_1258 Geobacter uraniireducens Rf4 camphor resistance protein CrcB YP_001230035.1 1487045 D 351605 CDS YP_001230036.1 148263330 5165203 1487534..1487878 1 NC_009483.1 PFAM: protein of unknown function DUF190; hypothetical protein 1487878 5165203 Gura_1259 Geobacter uraniireducens Rf4 hypothetical protein YP_001230036.1 1487534 D 351605 CDS YP_001230037.1 148263331 5165204 1488022..1490718 1 NC_009483.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 1490718 sucA 5165204 sucA Geobacter uraniireducens Rf4 2-oxoglutarate dehydrogenase E1 component YP_001230037.1 1488022 D 351605 CDS YP_001230038.1 148263332 5164711 1490917..1492158 1 NC_009483.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 1492158 5164711 Gura_1261 Geobacter uraniireducens Rf4 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_001230038.1 1490917 D 351605 CDS YP_001230039.1 148263333 5164712 1492210..1492527 1 NC_009483.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein 1492527 5164712 Gura_1262 Geobacter uraniireducens Rf4 prevent-host-death family protein YP_001230039.1 1492210 D 351605 CDS YP_001230040.1 148263334 5164713 1492505..1492810 1 NC_009483.1 PFAM: plasmid stabilization system; plasmid stabilization system protein 1492810 5164713 Gura_1263 Geobacter uraniireducens Rf4 plasmid stabilization system protein YP_001230040.1 1492505 D 351605 CDS YP_001230041.1 148263335 5164508 1492857..1494275 1 NC_009483.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; FAD dependent oxidoreductase; dihydrolipoamide dehydrogenase 1494275 5164508 Gura_1264 Geobacter uraniireducens Rf4 dihydrolipoamide dehydrogenase YP_001230041.1 1492857 D 351605 CDS YP_001230042.1 148263336 5164509 1494435..1496369 1 NC_009483.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1496369 5164509 Gura_1265 Geobacter uraniireducens Rf4 aconitate hydratase YP_001230042.1 1494435 D 351605 CDS YP_001230043.1 148263337 5164510 1496550..1497527 1 NC_009483.1 PFAM: dehydrogenase, E1 component; pyruvate dehydrogenase 1497527 5164510 Gura_1266 Geobacter uraniireducens Rf4 pyruvate dehydrogenase YP_001230043.1 1496550 D 351605 CDS YP_001230044.1 148263338 5164163 1497781..1498767 1 NC_009483.1 PFAM: Transketolase, central region; Transketolase domain protein; transketolase, central region 1498767 5164163 Gura_1267 Geobacter uraniireducens Rf4 transketolase, central region YP_001230044.1 1497781 D 351605 CDS YP_001230045.1 148263339 5164164 1499070..1500329 1 NC_009483.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; branched-chain alpha-keto acid dehydrogenase subunit E2 1500329 5164164 Gura_1268 Geobacter uraniireducens Rf4 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_001230045.1 1499070 D 351605 CDS YP_001230046.1 148263340 5164165 1500559..1501203 1 NC_009483.1 TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; lipoate-protein ligase B 1501203 5164165 Gura_1269 Geobacter uraniireducens Rf4 lipoate-protein ligase B YP_001230046.1 1500559 D 351605 CDS YP_001230047.1 148263341 5164674 1501264..1503681 1 NC_009483.1 PFAM: peptidase S16, lon domain protein; peptidase S16, lon domain-containing protein 1503681 5164674 Gura_1270 Geobacter uraniireducens Rf4 peptidase S16, lon domain-containing protein YP_001230047.1 1501264 D 351605 CDS YP_001230048.1 148263342 5164675 complement(1504010..1504642) 1 NC_009483.1 PFAM: NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) 1504642 5164675 Gura_1271 Geobacter uraniireducens Rf4 NAD(P)H dehydrogenase (quinone) YP_001230048.1 1504010 R 351605 CDS YP_001230049.1 148263343 5164676 complement(1504960..1505937) 1 NC_009483.1 meta-pathway phenol degradation-like protein 1505937 5164676 Gura_1272 Geobacter uraniireducens Rf4 meta-pathway phenol degradation-like protein YP_001230049.1 1504960 R 351605 CDS YP_001230050.1 148263344 5162730 complement(1506010..1506921) 1 NC_009483.1 PFAM: DSBA oxidoreductase; DSBA oxidoreductase 1506921 5162730 Gura_1273 Geobacter uraniireducens Rf4 DSBA oxidoreductase YP_001230050.1 1506010 R 351605 CDS YP_001230051.1 148263345 5162731 complement(1507023..1507628) 1 NC_009483.1 PFAM: isochorismatase hydrolase; isochorismatase hydrolase 1507628 5162731 Gura_1274 Geobacter uraniireducens Rf4 isochorismatase hydrolase YP_001230051.1 1507023 R 351605 CDS YP_001230052.1 148263346 5162732 1508110..1508946 1 NC_009483.1 hypothetical protein 1508946 5162732 Gura_1275 Geobacter uraniireducens Rf4 hypothetical protein YP_001230052.1 1508110 D 351605 CDS YP_001230053.1 148263347 5163479 1509199..1509534 1 NC_009483.1 PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 1509534 5163479 Gura_1277 Geobacter uraniireducens Rf4 DNA polymerase subunit beta YP_001230053.1 1509199 D 351605 CDS YP_001230054.1 148263348 5163974 1510135..1510467 1 NC_009483.1 hypothetical protein 1510467 5163974 Gura_1280 Geobacter uraniireducens Rf4 hypothetical protein YP_001230054.1 1510135 D 351605 CDS YP_001230055.1 148263349 5163975 complement(1510507..1511556) 1 NC_009483.1 PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 1511556 5163975 Gura_1281 Geobacter uraniireducens Rf4 filamentation induced by cAMP protein fic YP_001230055.1 1510507 R 351605 CDS YP_001230056.1 148263350 5165813 1511781..1513310 1 NC_009483.1 PFAM: sigma-54 factor, interaction domain-containing protein; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; putative GAF sensor protein 1513310 5165813 Gura_1282 Geobacter uraniireducens Rf4 putative GAF sensor protein YP_001230056.1 1511781 D 351605 CDS YP_001230057.1 148263351 5165814 complement(1513486..1514616) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 1514616 5165814 Gura_1283 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001230057.1 1513486 R 351605 CDS YP_001230058.1 148263352 5165815 complement(1514627..1515571) 1 NC_009483.1 PFAM: response regulator receiver; CheW domain protein; putative CheW protein 1515571 5165815 Gura_1284 Geobacter uraniireducens Rf4 putative CheW protein YP_001230058.1 1514627 R 351605 CDS YP_001230059.1 148263353 5164250 complement(1515638..1517668) 1 NC_009483.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; formate dehydrogenase 1517668 5164250 Gura_1285 Geobacter uraniireducens Rf4 formate dehydrogenase YP_001230059.1 1515638 R 351605 CDS YP_001230060.1 148263354 5164251 1517926..1520505 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; Cache domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 1520505 5164251 Gura_1286 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001230060.1 1517926 D 351605 CDS YP_001230061.1 148263355 5164252 1520554..1521111 1 NC_009483.1 PFAM: Chromate transporter; chromate transporter 1521111 5164252 Gura_1287 Geobacter uraniireducens Rf4 chromate transporter YP_001230061.1 1520554 D 351605 CDS YP_001230062.1 148263356 5165365 1521111..1521635 1 NC_009483.1 PFAM: Chromate transporter; chromate transporter 1521635 5165365 Gura_1288 Geobacter uraniireducens Rf4 chromate transporter YP_001230062.1 1521111 D 351605 CDS YP_001230063.1 148263357 5165366 complement(1521996..1522151) 1 NC_009483.1 hypothetical protein 1522151 5165366 Gura_1289 Geobacter uraniireducens Rf4 hypothetical protein YP_001230063.1 1521996 R 351605 CDS YP_001230064.1 148263358 5165367 complement(1522184..1522576) 1 NC_009483.1 TraR/DksA family transcriptional regulator 1522576 5165367 Gura_1290 Geobacter uraniireducens Rf4 TraR/DksA family transcriptional regulator YP_001230064.1 1522184 R 351605 CDS YP_001230065.1 148263359 5165196 1522815..1525226 1 NC_009483.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 1525226 5165196 Gura_1291 Geobacter uraniireducens Rf4 phosphoenolpyruvate synthase YP_001230065.1 1522815 D 351605 CDS YP_001230066.1 148263360 5165197 1526137..1527441 1 NC_009483.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 1527441 5165197 Gura_1292 Geobacter uraniireducens Rf4 RNA-directed DNA polymerase YP_001230066.1 1526137 D 351605 CDS YP_001230067.1 148263361 5165198 1527676..1528830 1 NC_009483.1 PFAM: protein of unknown function DUF214; hypothetical protein 1528830 5165198 Gura_1293 Geobacter uraniireducens Rf4 hypothetical protein YP_001230067.1 1527676 D 351605 CDS YP_001230068.1 148263362 5166131 1528832..1529536 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1529536 5166131 Gura_1294 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001230068.1 1528832 D 351605 CDS YP_001230069.1 148263363 5166132 1529526..1530611 1 NC_009483.1 PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein 1530611 5166132 Gura_1295 Geobacter uraniireducens Rf4 secretion protein HlyD family protein YP_001230069.1 1529526 D 351605 CDS YP_001230070.1 148263364 5166133 1530707..1531042 1 NC_009483.1 PFAM: protein of unknown function DUF1622; hypothetical protein 1531042 5166133 Gura_1296 Geobacter uraniireducens Rf4 hypothetical protein YP_001230070.1 1530707 D 351605 CDS YP_001230071.1 148263365 5163831 1531060..1532631 1 NC_009483.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein 1532631 5163831 Gura_1297 Geobacter uraniireducens Rf4 RND efflux system outer membrane lipoprotein YP_001230071.1 1531060 D 351605 CDS YP_001230072.1 148263366 5163832 complement(1532734..1534536) 1 NC_009483.1 PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 1534536 5163832 Gura_1298 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001230072.1 1532734 R 351605 CDS YP_001230073.1 148263367 5163833 1534607..1534906 1 NC_009483.1 hypothetical protein 1534906 5163833 Gura_1299 Geobacter uraniireducens Rf4 hypothetical protein YP_001230073.1 1534607 D 351605 CDS YP_001230074.1 148263368 5164524 1534909..1535331 1 NC_009483.1 SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 1535331 5164524 Gura_1300 Geobacter uraniireducens Rf4 helix-turn-helix domain-containing protein YP_001230074.1 1534909 D 351605 CDS YP_001230075.1 148263369 5164525 1535433..1535555 1 NC_009483.1 hypothetical protein 1535555 5164525 Gura_1301 Geobacter uraniireducens Rf4 hypothetical protein YP_001230075.1 1535433 D 351605 CDS YP_001230076.1 148263370 5164526 1535762..1537099 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 1537099 5164526 Gura_1302 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001230076.1 1535762 D 351605 CDS YP_001230077.1 148263371 5164407 complement(1537395..1537664) 1 NC_009483.1 hypothetical protein 1537664 5164407 Gura_1303 Geobacter uraniireducens Rf4 hypothetical protein YP_001230077.1 1537395 R 351605 CDS YP_001230078.1 148263372 5164408 complement(1537927..1538202) 1 NC_009483.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 1538202 5164408 Gura_1304 Geobacter uraniireducens Rf4 acylphosphatase YP_001230078.1 1537927 R 351605 CDS YP_001230079.1 148263373 5164409 complement(1538363..1540381) 1 NC_009483.1 TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation; SMART: Helix-hairpin-helix DNA-binding, class 1; NAD-dependent DNA ligase-like; NAD-dependent DNA ligase 1540381 5164409 Gura_1305 Geobacter uraniireducens Rf4 NAD-dependent DNA ligase YP_001230079.1 1538363 R 351605 CDS YP_001230080.1 148263374 5164291 1540792..1541901 1 NC_009483.1 PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein 1541901 5164291 Gura_1306 Geobacter uraniireducens Rf4 extracellular solute-binding protein YP_001230080.1 1540792 D 351605 CDS YP_001230081.1 148263375 5164292 1541901..1543574 1 NC_009483.1 PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1543574 5164292 Gura_1307 Geobacter uraniireducens Rf4 binding-protein-dependent transport system inner membrane protein YP_001230081.1 1541901 D 351605 CDS YP_001230082.1 148263376 5164293 1543567..1544628 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1544628 5164293 Gura_1308 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001230082.1 1543567 D 351605 CDS YP_001230083.1 148263377 5164103 1545101..1546246 1 NC_009483.1 hypothetical protein 1546246 5164103 Gura_1309 Geobacter uraniireducens Rf4 hypothetical protein YP_001230083.1 1545101 D 351605 CDS YP_001230084.1 148263378 5164104 1546246..1547376 1 NC_009483.1 hypothetical protein 1547376 5164104 Gura_1310 Geobacter uraniireducens Rf4 hypothetical protein YP_001230084.1 1546246 D 351605 CDS YP_001230085.1 148263379 5164105 1547440..1547718 1 NC_009483.1 hypothetical protein 1547718 5164105 Gura_1311 Geobacter uraniireducens Rf4 hypothetical protein YP_001230085.1 1547440 D 351605 CDS YP_001230086.1 148263380 5163405 1547830..1549584 1 NC_009483.1 PFAM: extracellular solute-binding protein, family 3; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 1549584 5163405 Gura_1312 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001230086.1 1547830 D 351605 CDS YP_001230087.1 148263381 5163406 1549581..1550993 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 1550993 5163406 Gura_1313 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001230087.1 1549581 D 351605 CDS YP_001230088.1 148263382 5163407 complement(1551040..1552296) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 1552296 5163407 Gura_1314 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001230088.1 1551040 R 351605 CDS YP_001230089.1 148263383 5164148 complement(1552424..1552663) 1 NC_009483.1 hypothetical protein 1552663 5164148 Gura_1315 Geobacter uraniireducens Rf4 hypothetical protein YP_001230089.1 1552424 R 351605 CDS YP_001230090.1 148263384 5164149 1553192..1554232 1 NC_009483.1 PFAM: Di-haem cytochrome c peroxidase; cytochrome-c peroxidase 1554232 5164149 Gura_1316 Geobacter uraniireducens Rf4 cytochrome-c peroxidase YP_001230090.1 1553192 D 351605 CDS YP_001230091.1 148263385 5164150 1554323..1554799 1 NC_009483.1 hypothetical protein 1554799 5164150 Gura_1317 Geobacter uraniireducens Rf4 hypothetical protein YP_001230091.1 1554323 D 351605 CDS YP_001230092.1 148263386 5164335 complement(1555055..1555345) 1 NC_009483.1 PFAM: plasmid stabilization system; plasmid stabilization system protein 1555345 5164335 Gura_1318 Geobacter uraniireducens Rf4 plasmid stabilization system protein YP_001230092.1 1555055 R 351605 CDS YP_001230093.1 148263387 5164336 complement(1555352..1555636) 1 NC_009483.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein 1555636 5164336 Gura_1319 Geobacter uraniireducens Rf4 prevent-host-death family protein YP_001230093.1 1555352 R 351605 CDS YP_001230094.1 148263388 5164337 1556153..1558486 1 NC_009483.1 hypothetical protein 1558486 5164337 Gura_1320 Geobacter uraniireducens Rf4 hypothetical protein YP_001230094.1 1556153 D 351605 CDS YP_001230095.1 148263389 5163844 complement(1558733..1560649) 1 NC_009483.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 1560649 5163844 Gura_1321 Geobacter uraniireducens Rf4 hypothetical protein YP_001230095.1 1558733 R 351605 CDS YP_001230096.1 148263390 5163845 complement(1560767..1562062) 1 NC_009483.1 hypothetical protein 1562062 5163845 Gura_1322 Geobacter uraniireducens Rf4 hypothetical protein YP_001230096.1 1560767 R 351605 CDS YP_001230097.1 148263391 5163846 complement(1562178..1562921) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 1562921 5163846 Gura_1323 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001230097.1 1562178 R 351605 CDS YP_001230098.1 148263392 5163547 1563641..1564048 1 NC_009483.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin-like metal-binding protein 1564048 5163547 Gura_1324 Geobacter uraniireducens Rf4 hemerythrin-like metal-binding protein YP_001230098.1 1563641 D 351605 CDS YP_001230099.1 148263393 5163548 1564229..1566265 1 NC_009483.1 PFAM: UvrD/REP helicase; UvrD/REP helicase 1566265 5163548 Gura_1325 Geobacter uraniireducens Rf4 UvrD/REP helicase YP_001230099.1 1564229 D 351605 CDS YP_001230100.1 148263394 5163549 complement(1566455..1566823) 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 1566823 5163549 Gura_1326 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001230100.1 1566455 R 351605 CDS YP_001230101.1 148263395 5163180 complement(1566942..1567235) 1 NC_009483.1 hypothetical protein 1567235 5163180 Gura_1327 Geobacter uraniireducens Rf4 hypothetical protein YP_001230101.1 1566942 R 351605 CDS YP_001230102.1 148263396 5163181 1567320..1567844 1 NC_009483.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 1567844 5163181 Gura_1328 Geobacter uraniireducens Rf4 XRE family transcriptional regulator YP_001230102.1 1567320 D 351605 CDS YP_001230103.1 148263397 5163182 complement(1567937..1568836) 1 NC_009483.1 hypothetical protein 1568836 5163182 Gura_1329 Geobacter uraniireducens Rf4 hypothetical protein YP_001230103.1 1567937 R 351605 CDS YP_001230104.1 148263398 5162942 complement(1569007..1569678) 1 NC_009483.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1569678 5162942 Gura_1330 Geobacter uraniireducens Rf4 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_001230104.1 1569007 R 351605 CDS YP_001230105.1 148263399 5162943 1569850..1570365 1 NC_009483.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 1570365 5162943 Gura_1331 Geobacter uraniireducens Rf4 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001230105.1 1569850 D 351605 CDS YP_001230106.1 148263400 5162630 1570509..1571678 1 NC_009483.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 1571678 5162630 Gura_1332 Geobacter uraniireducens Rf4 S-adenosylmethionine synthetase YP_001230106.1 1570509 D 351605 CDS YP_001230107.1 148263401 5162631 1572272..1573675 1 NC_009483.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 1573675 5162631 Gura_1333 Geobacter uraniireducens Rf4 RNA-directed DNA polymerase YP_001230107.1 1572272 D 351605 CDS YP_001230108.1 148263402 5162632 complement(1573791..1574522) 1 NC_009483.1 PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 1574522 5162632 Gura_1334 Geobacter uraniireducens Rf4 two component transcriptional regulator YP_001230108.1 1573791 R 351605 CDS YP_001230109.1 148263403 5162912 complement(1574519..1575484) 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 1575484 5162912 Gura_1335 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001230109.1 1574519 R 351605 CDS YP_001230110.1 148263404 5162913 complement(1575631..1576035) 1 NC_009483.1 PFAM: regulatory protein, MerR; MerR family transcriptional regulator 1576035 5162913 Gura_1336 Geobacter uraniireducens Rf4 MerR family transcriptional regulator YP_001230110.1 1575631 R 351605 CDS YP_001230111.1 148263405 5162914 1576557..1578116 1 NC_009483.1 PFAM: acetyl-CoA hydrolase/transferase; acetyl-CoA hydrolase 1578116 5162914 Gura_1337 Geobacter uraniireducens Rf4 acetyl-CoA hydrolase YP_001230111.1 1576557 D 351605 CDS YP_001230112.1 148263406 5166334 1578120..1578428 1 NC_009483.1 SMART: regulatory protein, IclR; regulatory protein IclR 1578428 5166334 Gura_1338 Geobacter uraniireducens Rf4 regulatory protein IclR YP_001230112.1 1578120 D 351605 CDS YP_001230113.1 148263407 5166335 1578507..1578815 1 NC_009483.1 PFAM: protein of unknown function DUF485; hypothetical protein 1578815 5166335 Gura_1339 Geobacter uraniireducens Rf4 hypothetical protein YP_001230113.1 1578507 D 351605 CDS YP_001230114.1 148263408 5166336 1578827..1580794 1 NC_009483.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; SSS family solute/sodium (Na+) symporter 1580794 5166336 Gura_1340 Geobacter uraniireducens Rf4 SSS family solute/sodium (Na+) symporter YP_001230114.1 1578827 D 351605 CDS YP_001230115.1 148263409 5167051 1581224..1581790 1 NC_009483.1 hypothetical protein 1581790 5167051 Gura_1341 Geobacter uraniireducens Rf4 hypothetical protein YP_001230115.1 1581224 D 351605 CDS YP_001230116.1 148263410 5167052 1581908..1585255 1 NC_009483.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: ArgK protein; methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; methylmalonyl-CoA mutase large subunit 1585255 5167052 Gura_1342 Geobacter uraniireducens Rf4 methylmalonyl-CoA mutase large subunit YP_001230116.1 1581908 D 351605 CDS YP_001230117.1 148263411 5167053 1585381..1586427 1 NC_009483.1 PFAM: thioesterase superfamily protein; thioesterase superfamily protein 1586427 5167053 Gura_1343 Geobacter uraniireducens Rf4 thioesterase superfamily protein YP_001230117.1 1585381 D 351605 CDS YP_001230118.1 148263412 5163646 1586664..1587200 1 NC_009483.1 PFAM: nitroreductase; nitroreductase 1587200 5163646 Gura_1344 Geobacter uraniireducens Rf4 nitroreductase YP_001230118.1 1586664 D 351605 CDS YP_001230119.1 148263413 5163647 1587194..1588363 1 NC_009483.1 PFAM: creatinase; peptidase M24; peptidase M24 1588363 5163647 Gura_1345 Geobacter uraniireducens Rf4 peptidase M24 YP_001230119.1 1587194 D 351605 CDS YP_001230120.1 148263414 5163648 1588840..1590759 1 NC_009483.1 PFAM: asparagine synthase; asparagine synthase 1590759 5163648 Gura_1346 Geobacter uraniireducens Rf4 asparagine synthase YP_001230120.1 1588840 D 351605 CDS YP_001230121.1 148263415 5165844 1591050..1591583 1 NC_009483.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1591583 5165844 Gura_1347 Geobacter uraniireducens Rf4 N-acetyltransferase GCN5 YP_001230121.1 1591050 D 351605 CDS YP_001230122.1 148263416 5165845 1591761..1592378 1 NC_009483.1 PFAM: phage Tail Collar domain protein; phage tail collar domain-containing protein 1592378 5165845 Gura_1348 Geobacter uraniireducens Rf4 phage tail collar domain-containing protein YP_001230122.1 1591761 D 351605 CDS YP_001230123.1 148263417 5165846 1592395..1592940 1 NC_009483.1 PFAM: phage Tail Collar domain protein; phage tail collar domain-containing protein 1592940 5165846 Gura_1349 Geobacter uraniireducens Rf4 phage tail collar domain-containing protein YP_001230123.1 1592395 D 351605 CDS YP_001230124.1 148263418 5166672 1592958..1593491 1 NC_009483.1 PFAM: phage Tail Collar domain protein; phage tail collar domain-containing protein 1593491 5166672 Gura_1350 Geobacter uraniireducens Rf4 phage tail collar domain-containing protein YP_001230124.1 1592958 D 351605 CDS YP_001230125.1 148263419 5166673 1593860..1595782 1 NC_009483.1 PFAM: asparagine synthase; asparagine synthase 1595782 5166673 Gura_1351 Geobacter uraniireducens Rf4 asparagine synthase YP_001230125.1 1593860 D 351605 CDS YP_001230126.1 148263420 5166674 1595772..1596578 1 NC_009483.1 hypothetical protein 1596578 5166674 Gura_1352 Geobacter uraniireducens Rf4 hypothetical protein YP_001230126.1 1595772 D 351605 CDS YP_001230127.1 148263421 5166581 1596575..1597483 1 NC_009483.1 hypothetical protein 1597483 5166581 Gura_1353 Geobacter uraniireducens Rf4 hypothetical protein YP_001230127.1 1596575 D 351605 CDS YP_001230128.1 148263422 5166582 1597476..1598345 1 NC_009483.1 PFAM: sulfotransferase; sulfotransferase 1598345 5166582 Gura_1354 Geobacter uraniireducens Rf4 sulfotransferase YP_001230128.1 1597476 D 351605 CDS YP_001230129.1 148263423 5166583 1598335..1598631 1 NC_009483.1 hypothetical protein 1598631 5166583 Gura_1355 Geobacter uraniireducens Rf4 hypothetical protein YP_001230129.1 1598335 D 351605 CDS YP_001230130.1 148263424 5166914 1598603..1599067 1 NC_009483.1 hypothetical protein 1599067 5166914 Gura_1356 Geobacter uraniireducens Rf4 hypothetical protein YP_001230130.1 1598603 D 351605 CDS YP_001230131.1 148263425 5166915 1599111..1599548 1 NC_009483.1 PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 1599548 5166915 Gura_1357 Geobacter uraniireducens Rf4 hypothetical protein YP_001230131.1 1599111 D 351605 CDS YP_001230132.1 148263426 5166916 complement(1599611..1599895) 1 NC_009483.1 SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 1599895 5166916 Gura_1358 Geobacter uraniireducens Rf4 helix-turn-helix domain-containing protein YP_001230132.1 1599611 R 351605 CDS YP_001230133.1 148263427 5167031 complement(1599899..1600108) 1 NC_009483.1 PFAM: protein of unknown function DUF891; hypothetical protein 1600108 5167031 Gura_1359 Geobacter uraniireducens Rf4 hypothetical protein YP_001230133.1 1599899 R 351605 CDS YP_001230134.1 148263428 5167032 1600445..1600768 1 NC_009483.1 hypothetical protein 1600768 5167032 Gura_1360 Geobacter uraniireducens Rf4 hypothetical protein YP_001230134.1 1600445 D 351605 CDS YP_001230135.1 148263429 5167033 1600765..1600995 1 NC_009483.1 hypothetical protein 1600995 5167033 Gura_1361 Geobacter uraniireducens Rf4 hypothetical protein YP_001230135.1 1600765 D 351605 CDS YP_001230136.1 148263430 5167040 1601149..1601340 1 NC_009483.1 hypothetical protein 1601340 5167040 Gura_1362 Geobacter uraniireducens Rf4 hypothetical protein YP_001230136.1 1601149 D 351605 CDS YP_001230137.1 148263431 5167041 complement(1601618..1601926) 1 NC_009483.1 hypothetical protein 1601926 5167041 Gura_1363 Geobacter uraniireducens Rf4 hypothetical protein YP_001230137.1 1601618 R 351605 CDS YP_001230138.1 148263432 5167042 complement(1602836..1604485) 1 NC_009483.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 1604485 5167042 Gura_1364 Geobacter uraniireducens Rf4 hydroxylamine reductase YP_001230138.1 1602836 R 351605 CDS YP_001230139.1 148263433 5162706 1604811..1605380 1 NC_009483.1 PFAM: Tellurite resistance protein TehB; Methyltransferase type 11; Methyltransferase type 12; type 12 methyltransferase 1605380 5162706 Gura_1365 Geobacter uraniireducens Rf4 type 12 methyltransferase YP_001230139.1 1604811 D 351605 CDS YP_001230140.1 148263434 5162707 complement(1605407..1606114) 1 NC_009483.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; ubiquinone/menaquinone biosynthesis methyltransferase 1606114 5162707 Gura_1366 Geobacter uraniireducens Rf4 ubiquinone/menaquinone biosynthesis methyltransferase YP_001230140.1 1605407 R 351605 CDS YP_001230141.1 148263435 5162708 1606376..1607788 1 NC_009483.1 PFAM: protein of unknown function DUF147; YbbR family protein; hypothetical protein 1607788 5162708 Gura_1367 Geobacter uraniireducens Rf4 hypothetical protein YP_001230141.1 1606376 D 351605 CDS YP_001230142.1 148263436 5162858 1608138..1609178 1 NC_009483.1 PFAM: NLP/P60 protein; Peptidoglycan-binding LysM; NLP/P60 protein 1609178 5162858 Gura_1368 Geobacter uraniireducens Rf4 NLP/P60 protein YP_001230142.1 1608138 D 351605 CDS YP_001230143.1 148263437 5162859 1609266..1610936 1 NC_009483.1 PFAM: TPR repeat-containing protein; cobalamin B12-binding domain protein; Radical SAM domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Elongator protein 3/MiaB/NifB; Tetratricopeptide domain protein; radical SAM domain-containing protein 1610936 5162859 Gura_1369 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001230143.1 1609266 D 351605 CDS YP_001230144.1 148263438 5162860 complement(1611160..1611579) 1 NC_009483.1 hypothetical protein 1611579 5162860 Gura_1370 Geobacter uraniireducens Rf4 hypothetical protein YP_001230144.1 1611160 R 351605 CDS YP_001230145.1 148263439 5162909 complement(1611696..1615010) 1 NC_009483.1 PFAM: AsmA family protein; AsmA family protein 1615010 5162909 Gura_1371 Geobacter uraniireducens Rf4 AsmA family protein YP_001230145.1 1611696 R 351605 CDS YP_001230146.1 148263440 5162910 1615170..1615529 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 1615529 5162910 Gura_1372 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001230146.1 1615170 D 351605 CDS YP_001230147.1 148263441 5162911 1615575..1616441 1 NC_009483.1 hypothetical protein 1616441 5162911 Gura_1373 Geobacter uraniireducens Rf4 hypothetical protein YP_001230147.1 1615575 D 351605 CDS YP_001230148.1 148263442 5162952 complement(1616504..1618744) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 1618744 5162952 Gura_1374 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001230148.1 1616504 R 351605 CDS YP_001230149.1 148263443 5162953 complement(1618915..1619316) 1 NC_009483.1 PFAM: sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 1619316 5162953 Gura_1375 Geobacter uraniireducens Rf4 ECF subfamily RNA polymerase sigma-24 factor YP_001230149.1 1618915 R 351605 CDS YP_001230150.1 148263444 5162954 1619353..1619817 1 NC_009483.1 PFAM: regulatory protein, MarR; MarR family transcriptional regulator 1619817 5162954 Gura_1376 Geobacter uraniireducens Rf4 MarR family transcriptional regulator YP_001230150.1 1619353 D 351605 CDS YP_001230151.1 148263445 5162973 1620196..1620468 1 NC_009483.1 hypothetical protein 1620468 5162973 Gura_1377 Geobacter uraniireducens Rf4 hypothetical protein YP_001230151.1 1620196 D 351605 CDS YP_001230152.1 148263446 5162974 1620766..1621050 1 NC_009483.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase 1621050 5162974 Gura_1378 Geobacter uraniireducens Rf4 alkylhydroperoxidase YP_001230152.1 1620766 D 351605 CDS YP_001230153.1 148263447 5162975 complement(1621179..1622234) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1622234 5162975 Gura_1379 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001230153.1 1621179 R 351605 CDS YP_001230154.1 148263448 5163018 complement(1622639..1623880) 1 NC_009483.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 1623880 5163018 Gura_1380 Geobacter uraniireducens Rf4 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001230154.1 1622639 R 351605 CDS YP_001230155.1 148263449 5163019 1624256..1626007 1 NC_009483.1 TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: AAA ATPase; arsenite-activated ATPase ArsA 1626007 5163019 Gura_1381 Geobacter uraniireducens Rf4 arsenite-activated ATPase ArsA YP_001230155.1 1624256 D 351605 CDS YP_001230156.1 148263450 5163020 1626042..1626413 1 NC_009483.1 PFAM: Arsenical resistance operon trans-acting repressor ArsD; arsenical resistance operon trans-acting repressor ArsD 1626413 5163020 Gura_1382 Geobacter uraniireducens Rf4 arsenical resistance operon trans-acting repressor ArsD YP_001230156.1 1626042 D 351605 CDS YP_001230157.1 148263451 5163037 1626464..1627156 1 NC_009483.1 hypothetical protein 1627156 5163037 Gura_1383 Geobacter uraniireducens Rf4 hypothetical protein YP_001230157.1 1626464 D 351605 CDS YP_001230158.1 148263452 5163038 1627207..1627866 1 NC_009483.1 PFAM: cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis transmembrane protein 1627866 5163038 Gura_1384 Geobacter uraniireducens Rf4 cytochrome c biogenesis transmembrane protein YP_001230158.1 1627207 D 351605 CDS YP_001230159.1 148263453 5163039 1627962..1628507 1 NC_009483.1 hypothetical protein 1628507 5163039 Gura_1385 Geobacter uraniireducens Rf4 hypothetical protein YP_001230159.1 1627962 D 351605 CDS YP_001230160.1 148263454 5163834 1628527..1629831 1 NC_009483.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 1629831 5163834 Gura_1386 Geobacter uraniireducens Rf4 amino acid permease-associated protein YP_001230160.1 1628527 D 351605 CDS YP_001230161.1 148263455 5163835 complement(1630150..1631073) 1 NC_009483.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1631073 lpxC 5163835 lpxC Geobacter uraniireducens Rf4 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_001230161.1 1630150 R 351605 CDS YP_001230162.1 148263456 5163836 complement(1631264..1632949) 1 NC_009483.1 PFAM: ABC-1 domain protein; hypothetical protein 1632949 5163836 Gura_1388 Geobacter uraniireducens Rf4 hypothetical protein YP_001230162.1 1631264 R 351605 CDS YP_001230163.1 148263457 5163841 complement(1632943..1633260) 1 NC_009483.1 hypothetical protein 1633260 5163841 Gura_1389 Geobacter uraniireducens Rf4 hypothetical protein YP_001230163.1 1632943 R 351605 CDS YP_001230164.1 148263458 5163842 complement(1633353..1633565) 1 NC_009483.1 hypothetical protein 1633565 5163842 Gura_1390 Geobacter uraniireducens Rf4 hypothetical protein YP_001230164.1 1633353 R 351605 CDS YP_001230165.1 148263459 5163843 complement(1633579..1634118) 1 NC_009483.1 PFAM: protein of unknown function DUF208; hypothetical protein 1634118 5163843 Gura_1391 Geobacter uraniireducens Rf4 hypothetical protein YP_001230165.1 1633579 R 351605 CDS YP_001230166.1 148263460 5163994 complement(1634231..1634662) 1 NC_009483.1 PFAM: protein of unknown function DUF101; hypothetical protein 1634662 5163994 Gura_1392 Geobacter uraniireducens Rf4 hypothetical protein YP_001230166.1 1634231 R 351605 CDS YP_001230167.1 148263461 5163995 complement(1634671..1636128) 1 NC_009483.1 PFAM: protein of unknown function UPF0027; hypothetical protein 1636128 5163995 Gura_1393 Geobacter uraniireducens Rf4 hypothetical protein YP_001230167.1 1634671 R 351605 CDS YP_001230168.1 148263462 5163996 complement(1636189..1637613) 1 NC_009483.1 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA 1637613 5163996 Gura_1394 Geobacter uraniireducens Rf4 ATP-dependent RNA helicase DbpA YP_001230168.1 1636189 R 351605 CDS YP_001230169.1 148263463 5164196 complement(1637624..1637893) 1 NC_009483.1 hypothetical protein 1637893 5164196 Gura_1395 Geobacter uraniireducens Rf4 hypothetical protein YP_001230169.1 1637624 R 351605 CDS YP_001230170.1 148263464 5164197 complement(1637877..1638176) 1 NC_009483.1 PFAM: protein of unknown function DUF497; hypothetical protein 1638176 5164197 Gura_1396 Geobacter uraniireducens Rf4 hypothetical protein YP_001230170.1 1637877 R 351605 CDS YP_001230171.1 148263465 5164198 1638406..1639791 1 NC_009483.1 PFAM: NLP/P60 protein; NLP/P60 protein 1639791 5164198 Gura_1397 Geobacter uraniireducens Rf4 NLP/P60 protein YP_001230171.1 1638406 D 351605 CDS YP_001230172.1 148263466 5164199 complement(1640029..1640916) 1 NC_009483.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator 1640916 5164199 Gura_1398 Geobacter uraniireducens Rf4 LysR family transcriptional regulator YP_001230172.1 1640029 R 351605 CDS YP_001230173.1 148263467 5164200 1641482..1642690 1 NC_009483.1 PFAM: creatinase; peptidase M24; creatinase 1642690 5164200 Gura_1399 Geobacter uraniireducens Rf4 creatinase YP_001230173.1 1641482 D 351605 CDS YP_001230174.1 148263468 5164201 1642998..1643483 1 NC_009483.1 PFAM: regulatory protein, MerR; MerR family transcriptional regulator 1643483 5164201 Gura_1400 Geobacter uraniireducens Rf4 MerR family transcriptional regulator YP_001230174.1 1642998 D 351605 CDS YP_001230175.1 148263469 5164511 1643748..1643987 1 NC_009483.1 hypothetical protein 1643987 5164511 Gura_1401 Geobacter uraniireducens Rf4 hypothetical protein YP_001230175.1 1643748 D 351605 CDS YP_001230176.1 148263470 5164512 1643984..1644814 1 NC_009483.1 hypothetical protein 1644814 5164512 Gura_1402 Geobacter uraniireducens Rf4 hypothetical protein YP_001230176.1 1643984 D 351605 CDS YP_001230177.1 148263471 5164513 complement(1645416..1646069) 1 NC_009483.1 hypothetical protein 1646069 5164513 Gura_1403 Geobacter uraniireducens Rf4 hypothetical protein YP_001230177.1 1645416 R 351605 CDS YP_001230178.1 148263472 5164882 complement(1646187..1646561) 1 NC_009483.1 PFAM: PilT protein domain protein; PilT domain-containing protein 1646561 5164882 Gura_1404 Geobacter uraniireducens Rf4 PilT domain-containing protein YP_001230178.1 1646187 R 351605 CDS YP_001230179.1 148263473 5164883 complement(1646558..1646764) 1 NC_009483.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; AbrB family transcriptional regulator 1646764 5164883 Gura_1405 Geobacter uraniireducens Rf4 AbrB family transcriptional regulator YP_001230179.1 1646558 R 351605 CDS YP_001230180.1 148263474 5164884 complement(1647053..1647235) 1 NC_009483.1 hypothetical protein 1647235 5164884 Gura_1406 Geobacter uraniireducens Rf4 hypothetical protein YP_001230180.1 1647053 R 351605 CDS YP_001230181.1 148263475 5165427 complement(1647265..1648098) 1 NC_009483.1 hypothetical protein 1648098 5165427 Gura_1407 Geobacter uraniireducens Rf4 hypothetical protein YP_001230181.1 1647265 R 351605 CDS YP_001230182.1 148263476 5165428 complement(1648351..1648812) 1 NC_009483.1 hypothetical protein 1648812 5165428 Gura_1408 Geobacter uraniireducens Rf4 hypothetical protein YP_001230182.1 1648351 R 351605 CDS YP_001230183.1 148263477 5165455 complement(1649150..1649581) 1 NC_009483.1 preprotein translocase subunit SecB-like protein 1649581 5165455 Gura_1409 Geobacter uraniireducens Rf4 preprotein translocase subunit SecB-like protein YP_001230183.1 1649150 R 351605 CDS YP_001230184.1 148263478 5165456 complement(1649571..1650077) 1 NC_009483.1 hypothetical protein 1650077 5165456 Gura_1410 Geobacter uraniireducens Rf4 hypothetical protein YP_001230184.1 1649571 R 351605 CDS YP_001230185.1 148263479 5165457 complement(1650103..1650432) 1 NC_009483.1 hypothetical protein 1650432 5165457 Gura_1411 Geobacter uraniireducens Rf4 hypothetical protein YP_001230185.1 1650103 R 351605 CDS YP_001230186.1 148263480 5165470 complement(1650906..1651631) 1 NC_009483.1 PFAM: Chromosomal replication initiator, DnaA; chromosomal replication initiator DnaA 1651631 5165470 Gura_1412 Geobacter uraniireducens Rf4 chromosomal replication initiator DnaA YP_001230186.1 1650906 R 351605 CDS YP_001230187.1 148263481 5165471 complement(1651634..1652650) 1 NC_009483.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1652650 ruvB 5165471 ruvB Geobacter uraniireducens Rf4 Holliday junction DNA helicase RuvB YP_001230187.1 1651634 R 351605 CDS YP_001230188.1 148263482 5165472 complement(1652715..1653314) 1 NC_009483.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 1653314 ruvA 5165472 ruvA Geobacter uraniireducens Rf4 Holliday junction DNA helicase RuvA YP_001230188.1 1652715 R 351605 CDS YP_001230189.1 148263483 5165607 complement(1653369..1653884) 1 NC_009483.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 1653884 ruvC 5165607 ruvC Geobacter uraniireducens Rf4 Holliday junction resolvase YP_001230189.1 1653369 R 351605 CDS YP_001230190.1 148263484 5165608 complement(1653943..1654686) 1 NC_009483.1 PFAM: protein of unknown function DUF28; hypothetical protein 1654686 5165608 Gura_1416 Geobacter uraniireducens Rf4 hypothetical protein YP_001230190.1 1653943 R 351605 CDS YP_001230191.1 148263485 5165609 1654843..1655280 1 NC_009483.1 hypothetical protein 1655280 5165609 Gura_1417 Geobacter uraniireducens Rf4 hypothetical protein YP_001230191.1 1654843 D 351605 CDS YP_001230192.1 148263486 5165613 1655813..1656577 1 NC_009483.1 PFAM: regulatory protein, IclR; regulatory protein IclR 1656577 5165613 Gura_1418 Geobacter uraniireducens Rf4 regulatory protein IclR YP_001230192.1 1655813 D 351605 CDS YP_001230193.1 148263487 5165614 1656698..1657006 1 NC_009483.1 PFAM: protein of unknown function DUF485; hypothetical protein 1657006 5165614 Gura_1419 Geobacter uraniireducens Rf4 hypothetical protein YP_001230193.1 1656698 D 351605 CDS YP_001230194.1 148263488 5165615 1657023..1659002 1 NC_009483.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; SSS family solute/sodium (Na+) symporter 1659002 5165615 Gura_1420 Geobacter uraniireducens Rf4 SSS family solute/sodium (Na+) symporter YP_001230194.1 1657023 D 351605 CDS YP_001230195.1 148263489 5165688 1659071..1660300 1 NC_009483.1 PFAM: protein of unknown function DUF294, nucleotidyltransferase putative; hypothetical protein 1660300 5165688 Gura_1421 Geobacter uraniireducens Rf4 hypothetical protein YP_001230195.1 1659071 D 351605 CDS YP_001230196.1 148263490 5165689 1660594..1662561 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; Cache, type 2 domain protein; integral membrane sensor signal transduction histidine kinase 1662561 5165689 Gura_1422 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001230196.1 1660594 D 351605 CDS YP_001230197.1 148263491 5165690 1662691..1662972 1 NC_009483.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein 1662972 5165690 Gura_1423 Geobacter uraniireducens Rf4 prevent-host-death family protein YP_001230197.1 1662691 D 351605 CDS YP_001230198.1 148263492 5166143 1662969..1663265 1 NC_009483.1 PFAM: plasmid stabilization system; plasmid stabilization system protein 1663265 5166143 Gura_1424 Geobacter uraniireducens Rf4 plasmid stabilization system protein YP_001230198.1 1662969 D 351605 CDS YP_001230199.1 148263493 5166144 1663391..1663717 1 NC_009483.1 hypothetical protein 1663717 5166144 Gura_1425 Geobacter uraniireducens Rf4 hypothetical protein YP_001230199.1 1663391 D 351605 CDS YP_001230200.1 148263494 5166145 1663805..1664305 1 NC_009483.1 hypothetical protein 1664305 5166145 Gura_1426 Geobacter uraniireducens Rf4 hypothetical protein YP_001230200.1 1663805 D 351605 CDS YP_001230201.1 148263495 5166462 1664662..1664799 1 NC_009483.1 hypothetical protein 1664799 5166462 Gura_1427 Geobacter uraniireducens Rf4 hypothetical protein YP_001230201.1 1664662 D 351605 CDS YP_001230202.1 148263496 5166463 1664975..1666357 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 1666357 5166463 Gura_1428 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001230202.1 1664975 D 351605 CDS YP_001230203.1 148263497 5166464 1666821..1667006 1 NC_009483.1 hypothetical protein 1667006 5166464 Gura_1429 Geobacter uraniireducens Rf4 hypothetical protein YP_001230203.1 1666821 D 351605 CDS YP_001230204.1 148263498 5166540 1667133..1667384 1 NC_009483.1 hypothetical protein 1667384 5166540 Gura_1430 Geobacter uraniireducens Rf4 hypothetical protein YP_001230204.1 1667133 D 351605 CDS YP_001230205.1 148263499 5166541 1667470..1668519 1 NC_009483.1 hypothetical protein 1668519 5166541 Gura_1431 Geobacter uraniireducens Rf4 hypothetical protein YP_001230205.1 1667470 D 351605 CDS YP_001230206.1 148263500 5166542 1668653..1669426 1 NC_009483.1 PFAM: protein of unknown function DUF81; hypothetical protein 1669426 5166542 Gura_1432 Geobacter uraniireducens Rf4 hypothetical protein YP_001230206.1 1668653 D 351605 CDS YP_001230207.1 148263501 5166859 complement(1669492..1669812) 1 NC_009483.1 hypothetical protein 1669812 5166859 Gura_1433 Geobacter uraniireducens Rf4 hypothetical protein YP_001230207.1 1669492 R 351605 CDS YP_001230208.1 148263502 5166860 complement(1669898..1670569) 1 NC_009483.1 hypothetical protein 1670569 5166860 Gura_1434 Geobacter uraniireducens Rf4 hypothetical protein YP_001230208.1 1669898 R 351605 CDS YP_001230209.1 148263503 5166861 1670704..1671909 1 NC_009483.1 SAM-dependent methyltransferase-like protein 1671909 5166861 Gura_1435 Geobacter uraniireducens Rf4 SAM-dependent methyltransferase-like protein YP_001230209.1 1670704 D 351605 CDS YP_001230210.1 148263504 5167054 1671937..1672140 1 NC_009483.1 PFAM: SlyX family protein; SlyX family protein 1672140 5167054 Gura_1436 Geobacter uraniireducens Rf4 SlyX family protein YP_001230210.1 1671937 D 351605 CDS YP_001230211.1 148263505 5167055 1672500..1673450 1 NC_009483.1 PFAM: aldo/keto reductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; aldo/keto reductase 1673450 5167055 Gura_1437 Geobacter uraniireducens Rf4 aldo/keto reductase YP_001230211.1 1672500 D 351605 CDS YP_001230212.1 148263506 5163729 1673635..1673880 1 NC_009483.1 hypothetical protein 1673880 5163729 Gura_1439 Geobacter uraniireducens Rf4 hypothetical protein YP_001230212.1 1673635 D 351605 CDS YP_001230213.1 148263507 5163730 1673960..1674556 1 NC_009483.1 hypothetical protein 1674556 5163730 Gura_1440 Geobacter uraniireducens Rf4 hypothetical protein YP_001230213.1 1673960 D 351605 CDS YP_001230214.1 148263508 5163731 complement(1674695..1675108) 1 NC_009483.1 hypothetical protein 1675108 5163731 Gura_1441 Geobacter uraniireducens Rf4 hypothetical protein YP_001230214.1 1674695 R 351605 CDS YP_001230215.1 148263509 5163655 complement(1675101..1675418) 1 NC_009483.1 hypothetical protein 1675418 5163655 Gura_1442 Geobacter uraniireducens Rf4 hypothetical protein YP_001230215.1 1675101 R 351605 CDS YP_001230216.1 148263510 5163656 1675651..1675893 1 NC_009483.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein 1675893 5163656 Gura_1443 Geobacter uraniireducens Rf4 prevent-host-death family protein YP_001230216.1 1675651 D 351605 CDS YP_001230217.1 148263511 5163657 1675887..1676153 1 NC_009483.1 TIGRFAM: addiction module toxin, Txe/YoeB family; addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; Addiction module toxin, Txe/YoeB; addiction module antitoxin 1676153 5163657 Gura_1444 Geobacter uraniireducens Rf4 addiction module antitoxin YP_001230217.1 1675887 D 351605 CDS YP_001230218.1 148263512 5162825 complement(1676407..1676943) 1 NC_009483.1 hypothetical protein 1676943 5162825 Gura_1445 Geobacter uraniireducens Rf4 hypothetical protein YP_001230218.1 1676407 R 351605 CDS YP_001230219.1 148263513 5162826 complement(1676963..1677847) 1 NC_009483.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1677847 5162826 Gura_1446 Geobacter uraniireducens Rf4 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001230219.1 1676963 R 351605 CDS YP_001230220.1 148263514 5162827 complement(1678097..1679125) 1 NC_009483.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase; agmatine deiminase 1679125 5162827 Gura_1447 Geobacter uraniireducens Rf4 agmatine deiminase YP_001230220.1 1678097 R 351605 CDS YP_001230221.1 148263515 5163538 1679543..1680754 1 NC_009483.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; S-adenosylmethionine synthetase 1680754 5163538 Gura_1448 Geobacter uraniireducens Rf4 S-adenosylmethionine synthetase YP_001230221.1 1679543 D 351605 CDS YP_001230222.1 148263516 5163540 1683822..1684646 1 NC_009483.1 PFAM: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 1684646 5163540 Gura_1450 Geobacter uraniireducens Rf4 Sel1 domain-containing protein YP_001230222.1 1683822 D 351605 CDS YP_001230223.1 148263517 5164656 complement(1684750..1685166) 1 NC_009483.1 hypothetical protein 1685166 5164656 Gura_1451 Geobacter uraniireducens Rf4 hypothetical protein YP_001230223.1 1684750 R 351605 CDS YP_001230224.1 148263518 5164657 1685258..1685539 1 NC_009483.1 PFAM: protein of unknown function DUF503; hypothetical protein 1685539 5164657 Gura_1452 Geobacter uraniireducens Rf4 hypothetical protein YP_001230224.1 1685258 D 351605 CDS YP_001230225.1 148263519 5164658 1685569..1686147 1 NC_009483.1 PFAM: manganese and iron superoxide dismutase; manganese and iron superoxide dismutase 1686147 5164658 Gura_1453 Geobacter uraniireducens Rf4 manganese and iron superoxide dismutase YP_001230225.1 1685569 D 351605 CDS YP_001230226.1 148263520 5163582 1686356..1686859 1 NC_009483.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; PfpI family intracellular peptidase 1686859 5163582 Gura_1454 Geobacter uraniireducens Rf4 PfpI family intracellular peptidase YP_001230226.1 1686356 D 351605 CDS YP_001230227.1 148263521 5163583 1686888..1687298 1 NC_009483.1 hypothetical protein 1687298 5163583 Gura_1455 Geobacter uraniireducens Rf4 hypothetical protein YP_001230227.1 1686888 D 351605 CDS YP_001230228.1 148263522 5163584 1687664..1688881 1 NC_009483.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 1688881 5163584 Gura_1456 Geobacter uraniireducens Rf4 RND family efflux transporter MFP subunit YP_001230228.1 1687664 D 351605 CDS YP_001230229.1 148263523 5167075 1688898..1689584 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1689584 5167075 Gura_1457 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001230229.1 1688898 D 351605 CDS YP_001230230.1 148263524 5167076 1689606..1690763 1 NC_009483.1 PFAM: protein of unknown function DUF214; hypothetical protein 1690763 5167076 Gura_1458 Geobacter uraniireducens Rf4 hypothetical protein YP_001230230.1 1689606 D 351605 CDS YP_001230231.1 148263525 5167077 1690763..1691929 1 NC_009483.1 PFAM: protein of unknown function DUF214; hypothetical protein 1691929 5167077 Gura_1459 Geobacter uraniireducens Rf4 hypothetical protein YP_001230231.1 1690763 D 351605 CDS YP_001230232.1 148263526 5164057 1691970..1692713 1 NC_009483.1 hypothetical protein 1692713 5164057 Gura_1460 Geobacter uraniireducens Rf4 hypothetical protein YP_001230232.1 1691970 D 351605 CDS YP_001230233.1 148263527 5164058 1692734..1693915 1 NC_009483.1 hypothetical protein 1693915 5164058 Gura_1461 Geobacter uraniireducens Rf4 hypothetical protein YP_001230233.1 1692734 D 351605 CDS YP_001230234.1 148263528 5164059 1694032..1695108 1 NC_009483.1 PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; prephenate dehydratase 1695108 5164059 Gura_1462 Geobacter uraniireducens Rf4 prephenate dehydratase YP_001230234.1 1694032 D 351605 CDS YP_001230235.1 148263529 5165952 1695232..1696092 1 NC_009483.1 PFAM: Prephenate dehydrogenase; prephenate dehydrogenase 1696092 5165952 Gura_1463 Geobacter uraniireducens Rf4 prephenate dehydrogenase YP_001230235.1 1695232 D 351605 CDS YP_001230236.1 148263530 5165953 1696123..1697409 1 NC_009483.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1697409 5165953 Gura_1464 Geobacter uraniireducens Rf4 3-phosphoshikimate 1-carboxyvinyltransferase YP_001230236.1 1696123 D 351605 CDS YP_001230237.1 148263531 5165954 1697406..1698128 1 NC_009483.1 TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase 1698128 5165954 Gura_1465 Geobacter uraniireducens Rf4 cytidylate kinase YP_001230237.1 1697406 D 351605 CDS YP_001230238.1 148263532 5163015 1698125..1698973 1 NC_009483.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase 1698973 5163015 Gura_1466 Geobacter uraniireducens Rf4 hydroxymethylbutenyl pyrophosphate reductase YP_001230238.1 1698125 D 351605 CDS YP_001230239.1 148263533 5163016 1699043..1700797 1 NC_009483.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1700797 rpsA 5163016 rpsA Geobacter uraniireducens Rf4 30S ribosomal protein S1 YP_001230239.1 1699043 D 351605 CDS YP_001230240.1 148263534 5163017 1700862..1701143 1 NC_009483.1 PFAM: histone family protein DNA-binding protein; histone family protein DNA-binding protein 1701143 5163017 Gura_1468 Geobacter uraniireducens Rf4 histone family protein DNA-binding protein YP_001230240.1 1700862 D 351605 CDS YP_001230241.1 148263535 5164604 complement(1701702..1701965) 1 NC_009483.1 hypothetical protein 1701965 5164604 Gura_1469 Geobacter uraniireducens Rf4 hypothetical protein YP_001230241.1 1701702 R 351605 CDS YP_001230242.1 148263536 5165792 1701975..1702214 1 NC_009483.1 hypothetical protein 1702214 5165792 Gura_1470 Geobacter uraniireducens Rf4 hypothetical protein YP_001230242.1 1701975 D 351605 CDS YP_001230243.1 148263537 5165793 1703268..1704572 1 NC_009483.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 1704572 5165793 Gura_1471 Geobacter uraniireducens Rf4 RNA-directed DNA polymerase YP_001230243.1 1703268 D 351605 CDS YP_001230244.1 148263538 5165794 1705430..1710232 1 NC_009483.1 TIGRFAM: YD repeat protein; YD repeat-containing protein 1710232 5165794 Gura_1472 Geobacter uraniireducens Rf4 YD repeat-containing protein YP_001230244.1 1705430 D 351605 CDS YP_001230245.1 148263539 5164101 1710841..1711944 1 NC_009483.1 hypothetical protein 1711944 5164101 Gura_1473 Geobacter uraniireducens Rf4 hypothetical protein YP_001230245.1 1710841 D 351605 CDS YP_001230246.1 148263540 5164102 1712044..1713195 1 NC_009483.1 hypothetical protein 1713195 5164102 Gura_1474 Geobacter uraniireducens Rf4 hypothetical protein YP_001230246.1 1712044 D 351605 CDS YP_001230247.1 148263541 5165268 1713241..1719000 1 NC_009483.1 PFAM: regulator of chromosome condensation, RCC1; regulator of chromosome condensation, RCC1 1719000 5165268 Gura_1475 Geobacter uraniireducens Rf4 regulator of chromosome condensation, RCC1 YP_001230247.1 1713241 D 351605 CDS YP_001230248.1 148263542 5165269 1719553..1719828 1 NC_009483.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 1719828 5165269 Gura_1476 Geobacter uraniireducens Rf4 XRE family transcriptional regulator YP_001230248.1 1719553 D 351605 CDS YP_001230249.1 148263543 5165270 1719829..1721154 1 NC_009483.1 PFAM: HipA domain protein; HipA domain-containing protein 1721154 5165270 Gura_1477 Geobacter uraniireducens Rf4 HipA domain-containing protein YP_001230249.1 1719829 D 351605 CDS YP_001230250.1 148263544 5164641 1721663..1721920 1 NC_009483.1 PFAM: SpoVT/AbrB domain protein; transcriptional regulator/antitoxin MazE 1721920 5164641 Gura_1478 Geobacter uraniireducens Rf4 transcriptional regulator/antitoxin MazE YP_001230250.1 1721663 D 351605 CDS YP_001230251.1 148263545 5164642 1721914..1722315 1 NC_009483.1 transcriptional modulator of MazE/toxin MazF 1722315 5164642 Gura_1479 Geobacter uraniireducens Rf4 transcriptional modulator of MazE/toxin MazF YP_001230251.1 1721914 D 351605 CDS YP_001230252.1 148263546 5164643 1722764..1725097 1 NC_009483.1 PFAM: N-6 DNA methylase; N-6 DNA methylase 1725097 5164643 Gura_1480 Geobacter uraniireducens Rf4 N-6 DNA methylase YP_001230252.1 1722764 D 351605 CDS YP_001230253.1 148263547 5166247 1725097..1726428 1 NC_009483.1 restriction endonuclease S subunits-like protein 1726428 5166247 Gura_1481 Geobacter uraniireducens Rf4 restriction endonuclease S subunits-like protein YP_001230253.1 1725097 D 351605 CDS YP_001230254.1 148263548 5166248 1726606..1729851 1 NC_009483.1 PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; hypothetical protein 1729851 5166248 Gura_1482 Geobacter uraniireducens Rf4 hypothetical protein YP_001230254.1 1726606 D 351605 CDS YP_001230255.1 148263549 5166249 1730245..1731855 1 NC_009483.1 PFAM: Peptidoglycan-binding domain 1 protein; SMART: AAA ATPase; peptidoglycan binding domain-containing protein 1731855 5166249 Gura_1483 Geobacter uraniireducens Rf4 peptidoglycan binding domain-containing protein YP_001230255.1 1730245 D 351605 CDS YP_001230256.1 148263550 5165670 1731852..1732574 1 NC_009483.1 hypothetical protein 1732574 5165670 Gura_1484 Geobacter uraniireducens Rf4 hypothetical protein YP_001230256.1 1731852 D 351605 CDS YP_001230257.1 148263551 5165671 1732648..1732944 1 NC_009483.1 PFAM: protein of unknown function UPF0153; hypothetical protein 1732944 5165671 Gura_1485 Geobacter uraniireducens Rf4 hypothetical protein YP_001230257.1 1732648 D 351605 CDS YP_001230258.1 148263552 5165672 1733246..1734523 1 NC_009483.1 hypothetical protein 1734523 5165672 Gura_1486 Geobacter uraniireducens Rf4 hypothetical protein YP_001230258.1 1733246 D 351605 CDS YP_001230259.1 148263553 5165177 complement(1734531..1734854) 1 NC_009483.1 PFAM: plasmid stabilization system; plasmid stabilization system protein 1734854 5165177 Gura_1487 Geobacter uraniireducens Rf4 plasmid stabilization system protein YP_001230259.1 1734531 R 351605 CDS YP_001230260.1 148263554 5165178 complement(1734851..1735132) 1 NC_009483.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein 1735132 5165178 Gura_1488 Geobacter uraniireducens Rf4 prevent-host-death family protein YP_001230260.1 1734851 R 351605 CDS YP_001230261.1 148263555 5165179 1735384..1735725 1 NC_009483.1 hypothetical protein 1735725 5165179 Gura_1489 Geobacter uraniireducens Rf4 hypothetical protein YP_001230261.1 1735384 D 351605 CDS YP_001230262.1 148263556 5163364 complement(1735729..1737063) 1 NC_009483.1 TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying enzyme 1737063 5163364 Gura_1490 Geobacter uraniireducens Rf4 MiaB-like tRNA modifying enzyme YP_001230262.1 1735729 R 351605 CDS YP_001230263.1 148263557 5163365 complement(1737105..1738280) 1 NC_009483.1 PFAM: transposase, IS4 family protein; transposase, IS4 family protein 1738280 5163365 Gura_1491 Geobacter uraniireducens Rf4 transposase, IS4 family protein YP_001230263.1 1737105 R 351605 CDS YP_001230264.1 148263558 5163366 complement(1738584..1739711) 1 NC_009483.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1739711 mnmA 5163366 mnmA Geobacter uraniireducens Rf4 tRNA-specific 2-thiouridylase MnmA YP_001230264.1 1738584 R 351605 CDS YP_001230265.1 148263559 5163431 complement(1740022..1741161) 1 NC_009483.1 PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; class V aminotransferase 1741161 5163431 Gura_1493 Geobacter uraniireducens Rf4 class V aminotransferase YP_001230265.1 1740022 R 351605 CDS YP_001230266.1 148263560 5163432 complement(1741218..1741643) 1 NC_009483.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator 1741643 5163432 Gura_1494 Geobacter uraniireducens Rf4 BadM/Rrf2 family transcriptional regulator YP_001230266.1 1741218 R 351605 CDS YP_001230267.1 148263561 5163433 complement(1741648..1742325) 1 NC_009483.1 TIGRFAM: serine O-acetyltransferase; serine O-acetyltransferase 1742325 5163433 Gura_1495 Geobacter uraniireducens Rf4 serine O-acetyltransferase YP_001230267.1 1741648 R 351605 CDS YP_001230268.1 148263562 5164471 complement(1742447..1744486) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 1744486 5164471 Gura_1496 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001230268.1 1742447 R 351605 CDS YP_001230269.1 148263563 5164472 complement(1744744..1746051) 1 NC_009483.1 hypothetical protein 1746051 5164472 Gura_1497 Geobacter uraniireducens Rf4 hypothetical protein YP_001230269.1 1744744 R 351605 CDS YP_001230270.1 148263564 5164473 1746768..1748072 1 NC_009483.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 1748072 5164473 Gura_1498 Geobacter uraniireducens Rf4 RNA-directed DNA polymerase YP_001230270.1 1746768 D 351605 CDS YP_001230271.1 148263565 5167078 complement(1748296..1749201) 1 NC_009483.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1749201 miaA 5167078 miaA Geobacter uraniireducens Rf4 tRNA delta(2)-isopentenylpyrophosphate transferase YP_001230271.1 1748296 R 351605 CDS YP_001230272.1 148263566 5167079 complement(1749210..1750544) 1 NC_009483.1 TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 1750544 5167079 Gura_1500 Geobacter uraniireducens Rf4 carboxyl-terminal protease YP_001230272.1 1749210 R 351605 CDS YP_001230273.1 148263567 5167080 complement(1750949..1751779) 1 NC_009483.1 PFAM: protein of unknown function DUF155; hypothetical protein 1751779 5167080 Gura_1501 Geobacter uraniireducens Rf4 hypothetical protein YP_001230273.1 1750949 R 351605 CDS YP_001230274.1 148263568 5166410 1751909..1752220 1 NC_009483.1 hypothetical protein 1752220 5166410 Gura_1502 Geobacter uraniireducens Rf4 hypothetical protein YP_001230274.1 1751909 D 351605 CDS YP_001230275.1 148263569 5166411 complement(1752248..1752427) 1 NC_009483.1 hypothetical protein 1752427 5166411 Gura_1503 Geobacter uraniireducens Rf4 hypothetical protein YP_001230275.1 1752248 R 351605 CDS YP_001230276.1 148263570 5166412 1752873..1755338 1 NC_009483.1 hypothetical protein 1755338 5166412 Gura_1504 Geobacter uraniireducens Rf4 hypothetical protein YP_001230276.1 1752873 D 351605 CDS YP_001230277.1 148263571 5165288 1755301..1756317 1 NC_009483.1 PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase 1756317 5165288 Gura_1505 Geobacter uraniireducens Rf4 phosphatidylserine decarboxylase YP_001230277.1 1755301 D 351605 CDS YP_001230278.1 148263572 5165289 1756341..1757393 1 NC_009483.1 hypothetical protein 1757393 5165289 Gura_1506 Geobacter uraniireducens Rf4 hypothetical protein YP_001230278.1 1756341 D 351605 CDS YP_001230279.1 148263573 5165290 complement(1757580..1758611) 1 NC_009483.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein, family 1; phosphate ABC transporter periplasmic phosphate-binding protein 1758611 5165290 Gura_1507 Geobacter uraniireducens Rf4 phosphate ABC transporter periplasmic phosphate-binding protein YP_001230279.1 1757580 R 351605 CDS YP_001230280.1 148263574 5164565 1759519..1760823 1 NC_009483.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 1760823 5164565 Gura_1508 Geobacter uraniireducens Rf4 RNA-directed DNA polymerase YP_001230280.1 1759519 D 351605 CDS YP_001230281.1 148263575 5164566 complement(1761045..1762076) 1 NC_009483.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein, family 1; phosphate ABC transporter periplasmic phosphate-binding protein 1762076 5164566 Gura_1509 Geobacter uraniireducens Rf4 phosphate ABC transporter periplasmic phosphate-binding protein YP_001230281.1 1761045 R 351605 CDS YP_001230282.1 148263576 5164567 complement(1762145..1763572) 1 NC_009483.1 PFAM: EAL domain protein; diguanylate phosphodiesterase 1763572 5164567 Gura_1510 Geobacter uraniireducens Rf4 diguanylate phosphodiesterase YP_001230282.1 1762145 R 351605 CDS YP_001230283.1 148263577 5165967 complement(1763612..1763926) 1 NC_009483.1 hypothetical protein 1763926 5165967 Gura_1511 Geobacter uraniireducens Rf4 hypothetical protein YP_001230283.1 1763612 R 351605 CDS YP_001230284.1 148263578 5165968 complement(1763898..1764899) 1 NC_009483.1 hypothetical protein 1764899 5165968 Gura_1512 Geobacter uraniireducens Rf4 hypothetical protein YP_001230284.1 1763898 R 351605 CDS YP_001230285.1 148263579 5165969 complement(1764917..1766110) 1 NC_009483.1 PFAM: CBS domain containing protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; stage II sporulation E family protein 1766110 5165969 Gura_1513 Geobacter uraniireducens Rf4 stage II sporulation E family protein YP_001230285.1 1764917 R 351605 CDS YP_001230286.1 148263580 5163940 complement(1766291..1766962) 1 NC_009483.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; phosphate uptake regulator PhoU 1766962 5163940 Gura_1514 Geobacter uraniireducens Rf4 phosphate uptake regulator PhoU YP_001230286.1 1766291 R 351605 CDS YP_001230287.1 148263581 5163941 complement(1767109..1767867) 1 NC_009483.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 1767867 5163941 Gura_1515 Geobacter uraniireducens Rf4 phosphate ABC transporter ATP-binding protein YP_001230287.1 1767109 R 351605 CDS YP_001230288.1 148263582 5163942 complement(1768110..1768952) 1 NC_009483.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter inner membrane protein PstA 1768952 5163942 Gura_1516 Geobacter uraniireducens Rf4 phosphate ABC transporter inner membrane protein PstA YP_001230288.1 1768110 R 351605 CDS YP_001230289.1 148263583 5166634 complement(1768949..1769923) 1 NC_009483.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 1769923 5166634 Gura_1517 Geobacter uraniireducens Rf4 phosphate ABC transporter permease YP_001230289.1 1768949 R 351605 CDS YP_001230290.1 148263584 5166635 complement(1770033..1771061) 1 NC_009483.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein, family 1; phosphate ABC transporter periplasmic phosphate-binding protein 1771061 5166635 Gura_1518 Geobacter uraniireducens Rf4 phosphate ABC transporter periplasmic phosphate-binding protein YP_001230290.1 1770033 R 351605 CDS YP_001230291.1 148263585 5166636 complement(1771239..1771676) 1 NC_009483.1 hypothetical protein 1771676 5166636 Gura_1519 Geobacter uraniireducens Rf4 hypothetical protein YP_001230291.1 1771239 R 351605 CDS YP_001230292.1 148263586 5166965 1771829..1772437 1 NC_009483.1 PFAM: protein of unknown function DUF502; hypothetical protein 1772437 5166965 Gura_1520 Geobacter uraniireducens Rf4 hypothetical protein YP_001230292.1 1771829 D 351605 CDS YP_001230293.1 148263587 5166966 complement(1772563..1773834) 1 NC_009483.1 molecular chaperone-like protein 1773834 5166966 Gura_1521 Geobacter uraniireducens Rf4 molecular chaperone-like protein YP_001230293.1 1772563 R 351605 CDS YP_001230294.1 148263588 5166967 1774275..1774745 1 NC_009483.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1774745 5166967 Gura_1522 Geobacter uraniireducens Rf4 N-acetyltransferase GCN5 YP_001230294.1 1774275 D 351605 CDS YP_001230295.1 148263589 5166935 1774839..1775330 1 NC_009483.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated domain-containing protein 1775330 5166935 Gura_1523 Geobacter uraniireducens Rf4 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_001230295.1 1774839 D 351605 CDS YP_001230296.1 148263590 5166937 1775746..1776312 1 NC_009483.1 hypothetical protein 1776312 5166937 Gura_1525 Geobacter uraniireducens Rf4 hypothetical protein YP_001230296.1 1775746 D 351605 CDS YP_001230297.1 148263591 5165988 1776516..1777046 1 NC_009483.1 PFAM: adenylate cyclase; adenylate cyclase 1777046 5165988 Gura_1526 Geobacter uraniireducens Rf4 adenylate cyclase YP_001230297.1 1776516 D 351605 CDS YP_001230298.1 148263592 5165989 1777131..1777883 1 NC_009483.1 PFAM: protein of unknown function DUF169; hypothetical protein 1777883 5165989 Gura_1527 Geobacter uraniireducens Rf4 hypothetical protein YP_001230298.1 1777131 D 351605 CDS YP_001230299.1 148263593 5165990 1777945..1778559 1 NC_009483.1 transglutaminase 1778559 5165990 Gura_1528 Geobacter uraniireducens Rf4 transglutaminase YP_001230299.1 1777945 D 351605 CDS YP_001230300.1 148263594 5163550 1778651..1779499 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1779499 5163550 Gura_1529 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001230300.1 1778651 D 351605 CDS YP_001230301.1 148263595 5163551 1779601..1780101 1 NC_009483.1 TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8, signal peptidase II; lipoprotein signal peptidase 1780101 5163551 Gura_1530 Geobacter uraniireducens Rf4 lipoprotein signal peptidase YP_001230301.1 1779601 D 351605 CDS YP_001230302.1 148263596 5163552 1780297..1780587 1 NC_009483.1 PFAM: protein of unknown function DUF156; hypothetical protein 1780587 5163552 Gura_1531 Geobacter uraniireducens Rf4 hypothetical protein YP_001230302.1 1780297 D 351605 CDS YP_001230303.1 148263597 5163753 1780783..1783176 1 NC_009483.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; heavy metal translocating P-type ATPase 1783176 5163753 Gura_1532 Geobacter uraniireducens Rf4 heavy metal translocating P-type ATPase YP_001230303.1 1780783 D 351605 CDS YP_001230304.1 148263598 5163754 complement(1783654..1784622) 1 NC_009483.1 PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1784622 5163754 Gura_1533 Geobacter uraniireducens Rf4 alpha/beta hydrolase fold protein YP_001230304.1 1783654 R 351605 CDS YP_001230305.1 148263599 5163755 complement(1784647..1785615) 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 1785615 5163755 Gura_1534 Geobacter uraniireducens Rf4 NAD-dependent epimerase/dehydratase YP_001230305.1 1784647 R 351605 CDS YP_001230306.1 148263600 5165300 complement(1785603..1786664) 1 NC_009483.1 hypothetical protein 1786664 5165300 Gura_1535 Geobacter uraniireducens Rf4 hypothetical protein YP_001230306.1 1785603 R 351605 CDS YP_001230307.1 148263601 5165301 complement(1787349..1788131) 1 NC_009483.1 PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1788131 5165301 Gura_1536 Geobacter uraniireducens Rf4 short-chain dehydrogenase/reductase SDR YP_001230307.1 1787349 R 351605 CDS YP_001230308.1 148263602 5165302 complement(1788572..1789762) 1 NC_009483.1 hypothetical protein 1789762 5165302 Gura_1537 Geobacter uraniireducens Rf4 hypothetical protein YP_001230308.1 1788572 R 351605 CDS YP_001230309.1 148263603 5165658 complement(1789759..1791000) 1 NC_009483.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 1791000 5165658 Gura_1538 Geobacter uraniireducens Rf4 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001230309.1 1789759 R 351605 CDS YP_001230310.1 148263604 5165659 complement(1791041..1794151) 1 NC_009483.1 TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; putative CoA-substrate-specific enzyme activase 1794151 5165659 Gura_1539 Geobacter uraniireducens Rf4 putative CoA-substrate-specific enzyme activase YP_001230310.1 1791041 R 351605 CDS YP_001230311.1 148263605 5165660 1794393..1794917 1 NC_009483.1 PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1794917 5165660 Gura_1540 Geobacter uraniireducens Rf4 transposase IS3/IS911 family protein YP_001230311.1 1794393 D 351605 CDS YP_001230312.1 148263606 5164582 1794998..1795954 1 NC_009483.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 1795954 5164582 Gura_1541 Geobacter uraniireducens Rf4 integrase catalytic subunit YP_001230312.1 1794998 D 351605 CDS YP_001230313.1 148263607 5164583 complement(1795936..1796334) 1 NC_009483.1 hypothetical protein 1796334 5164583 Gura_1542 Geobacter uraniireducens Rf4 hypothetical protein YP_001230313.1 1795936 R 351605 CDS YP_001230314.1 148263608 5164584 1796437..1797678 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; putative signal transduction histidine kinase 1797678 5164584 Gura_1543 Geobacter uraniireducens Rf4 putative signal transduction histidine kinase YP_001230314.1 1796437 D 351605 CDS YP_001230315.1 148263609 5162633 1797685..1798410 1 NC_009483.1 PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator 1798410 5162633 Gura_1544 Geobacter uraniireducens Rf4 two component LuxR family transcriptional regulator YP_001230315.1 1797685 D 351605 CDS YP_001230316.1 148263610 5162634 complement(1798446..1799828) 1 NC_009483.1 PFAM: transposase, IS4 family protein; transposase, IS4 family protein 1799828 5162634 Gura_1545 Geobacter uraniireducens Rf4 transposase, IS4 family protein YP_001230316.1 1798446 R 351605 CDS YP_001230317.1 148263611 5162635 complement(1800049..1800438) 1 NC_009483.1 hypothetical protein 1800438 5162635 Gura_1546 Geobacter uraniireducens Rf4 hypothetical protein YP_001230317.1 1800049 R 351605 CDS YP_001230318.1 148263612 5163393 complement(1800472..1802034) 1 NC_009483.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; response regulator receiver sensor signal transduction histidine kinase 1802034 5163393 Gura_1547 Geobacter uraniireducens Rf4 response regulator receiver sensor signal transduction histidine kinase YP_001230318.1 1800472 R 351605 CDS YP_001230319.1 148263613 5163394 complement(1802047..1802421) 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 1802421 5163394 Gura_1548 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001230319.1 1802047 R 351605 CDS YP_001230320.1 148263614 5163395 complement(1802418..1804916) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 1804916 5163395 Gura_1549 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001230320.1 1802418 R 351605 CDS YP_001230321.1 148263615 5162787 complement(1805073..1806743) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: histidine kinase, HAMP region domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; putative PAS/PAC sensor protein 1806743 5162787 Gura_1550 Geobacter uraniireducens Rf4 putative PAS/PAC sensor protein YP_001230321.1 1805073 R 351605 CDS YP_001230322.1 148263616 5162788 complement(1806747..1807400) 1 NC_009483.1 hypothetical protein 1807400 5162788 Gura_1551 Geobacter uraniireducens Rf4 hypothetical protein YP_001230322.1 1806747 R 351605 CDS YP_001230323.1 148263617 5162789 complement(1807403..1809598) 1 NC_009483.1 PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, plug 1809598 5162789 Gura_1552 Geobacter uraniireducens Rf4 TonB-dependent receptor, plug YP_001230323.1 1807403 R 351605 CDS YP_001230324.1 148263618 5162662 1810043..1810516 1 NC_009483.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1810516 5162662 Gura_1554 Geobacter uraniireducens Rf4 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001230324.1 1810043 D 351605 CDS YP_001230325.1 148263619 5162663 1810513..1810986 1 NC_009483.1 PFAM: regulatory protein, MarR; MarR family transcriptional regulator 1810986 5162663 Gura_1555 Geobacter uraniireducens Rf4 MarR family transcriptional regulator YP_001230325.1 1810513 D 351605 CDS YP_001230326.1 148263620 5163466 1811025..1811723 1 NC_009483.1 hypothetical protein 1811723 5163466 Gura_1556 Geobacter uraniireducens Rf4 hypothetical protein YP_001230326.1 1811025 D 351605 CDS YP_001230327.1 148263621 5163468 1812138..1812737 1 NC_009483.1 hypothetical protein 1812737 5163468 Gura_1558 Geobacter uraniireducens Rf4 hypothetical protein YP_001230327.1 1812138 D 351605 CDS YP_001230328.1 148263622 5163694 1813381..1814550 1 NC_009483.1 PFAM: Rhodanese domain protein; rhodanese domain-containing protein 1814550 5163694 Gura_1559 Geobacter uraniireducens Rf4 rhodanese domain-containing protein YP_001230328.1 1813381 D 351605 CDS YP_001230329.1 148263623 5163695 1814807..1815772 1 NC_009483.1 PFAM: Rhodanese domain protein; rhodanese domain-containing protein 1815772 5163695 Gura_1560 Geobacter uraniireducens Rf4 rhodanese domain-containing protein YP_001230329.1 1814807 D 351605 CDS YP_001230330.1 148263624 5163696 1815864..1816703 1 NC_009483.1 hypothetical protein 1816703 5163696 Gura_1561 Geobacter uraniireducens Rf4 hypothetical protein YP_001230330.1 1815864 D 351605 CDS YP_001230331.1 148263625 5163505 1816836..1818707 1 NC_009483.1 PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 1818707 5163505 Gura_1562 Geobacter uraniireducens Rf4 hypothetical protein YP_001230331.1 1816836 D 351605 CDS YP_001230332.1 148263626 5163506 1818704..1819462 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 1819462 5163506 Gura_1563 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001230332.1 1818704 D 351605 CDS YP_001230333.1 148263627 5163507 1819477..1820367 1 NC_009483.1 PFAM: Rhodanese domain protein; rhodanese domain-containing protein 1820367 5163507 Gura_1564 Geobacter uraniireducens Rf4 rhodanese domain-containing protein YP_001230333.1 1819477 D 351605 CDS YP_001230334.1 148263628 5163741 1820477..1820992 1 NC_009483.1 hypothetical protein 1820992 5163741 Gura_1565 Geobacter uraniireducens Rf4 hypothetical protein YP_001230334.1 1820477 D 351605 CDS YP_001230335.1 148263629 5163742 1820992..1822017 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 1822017 5163742 Gura_1566 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001230335.1 1820992 D 351605 CDS YP_001230336.1 148263630 5163743 1822002..1823480 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 1823480 5163743 Gura_1567 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001230336.1 1822002 D 351605 CDS YP_001230337.1 148263631 5163799 complement(1823535..1825025) 1 NC_009483.1 hypothetical protein 1825025 5163799 Gura_1568 Geobacter uraniireducens Rf4 hypothetical protein YP_001230337.1 1823535 R 351605 CDS YP_001230338.1 148263632 5163800 1825307..1826602 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1826602 5163800 Gura_1569 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001230338.1 1825307 D 351605 CDS YP_001230339.1 148263633 5163801 complement(1826683..1828128) 1 NC_009483.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent; glyceraldehyde-3-phosphate dehydrogenase 1828128 5163801 Gura_1570 Geobacter uraniireducens Rf4 glyceraldehyde-3-phosphate dehydrogenase YP_001230339.1 1826683 R 351605 CDS YP_001230340.1 148263634 5163910 complement(1828496..1830274) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 1830274 5163910 Gura_1571 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001230340.1 1828496 R 351605 CDS YP_001230341.1 148263635 5163911 complement(1830274..1830951) 1 NC_009483.1 PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 1830951 5163911 Gura_1572 Geobacter uraniireducens Rf4 two component transcriptional regulator YP_001230341.1 1830274 R 351605 CDS YP_001230342.1 148263636 5163912 1831573..1833231 1 NC_009483.1 activates fatty acids by binding to coenzyme A; AMP-binding protein 1833231 5163912 Gura_1573 Geobacter uraniireducens Rf4 AMP-binding protein YP_001230342.1 1831573 D 351605 CDS YP_001230343.1 148263637 5163946 1833299..1833445 1 NC_009483.1 hypothetical protein 1833445 5163946 Gura_1574 Geobacter uraniireducens Rf4 hypothetical protein YP_001230343.1 1833299 D 351605 CDS YP_001230344.1 148263638 5163947 1833464..1834654 1 NC_009483.1 PFAM: creatinase; peptidase M24; creatinase 1834654 5163947 Gura_1575 Geobacter uraniireducens Rf4 creatinase YP_001230344.1 1833464 D 351605 CDS YP_001230345.1 148263639 5163948 1834936..1836261 1 NC_009483.1 PFAM: Citrate synthase; type I citrate synthase 1836261 5163948 Gura_1576 Geobacter uraniireducens Rf4 type I citrate synthase YP_001230345.1 1834936 D 351605 CDS YP_001230346.1 148263640 5164241 complement(1836534..1837091) 1 NC_009483.1 PFAM: AMMECR1 domain protein; AMMECR1 domain-containing protein 1837091 5164241 Gura_1577 Geobacter uraniireducens Rf4 AMMECR1 domain-containing protein YP_001230346.1 1836534 R 351605 CDS YP_001230347.1 148263641 5164242 1837186..1838613 1 NC_009483.1 PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase 1838613 5164242 Gura_1578 Geobacter uraniireducens Rf4 aldehyde dehydrogenase YP_001230347.1 1837186 D 351605 CDS YP_001230348.1 148263642 5164243 1838805..1838999 1 NC_009483.1 hypothetical protein 1838999 5164243 Gura_1579 Geobacter uraniireducens Rf4 hypothetical protein YP_001230348.1 1838805 D 351605 CDS YP_001230349.1 148263643 5164553 1839158..1839571 1 NC_009483.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1839571 ndk 5164553 ndk Geobacter uraniireducens Rf4 nucleoside diphosphate kinase YP_001230349.1 1839158 D 351605 CDS YP_001230350.1 148263644 5164554 1839634..1840665 1 NC_009483.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1840665 5164554 Gura_1581 Geobacter uraniireducens Rf4 ribosomal RNA large subunit methyltransferase N YP_001230350.1 1839634 D 351605 CDS YP_001230351.1 148263645 5164555 1840701..1841564 1 NC_009483.1 TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine phosphorylase, family 2; methylthioadenosine phosphorylase 1841564 5164555 Gura_1582 Geobacter uraniireducens Rf4 methylthioadenosine phosphorylase YP_001230351.1 1840701 D 351605 CDS YP_001230352.1 148263646 5163126 1841598..1842497 1 NC_009483.1 PFAM: protein of unknown function DUF815; hypothetical protein 1842497 5163126 Gura_1583 Geobacter uraniireducens Rf4 hypothetical protein YP_001230352.1 1841598 D 351605 CDS YP_001230353.1 148263647 5163127 complement(1842986..1844272) 1 NC_009483.1 transposase 1844272 5163127 Gura_1584 Geobacter uraniireducens Rf4 transposase YP_001230353.1 1842986 R 351605 CDS YP_001230354.1 148263648 5163128 1844987..1845613 1 NC_009483.1 phospholipid N-methyltransferase-like protein 1845613 5163128 Gura_1585 Geobacter uraniireducens Rf4 phospholipid N-methyltransferase-like protein YP_001230354.1 1844987 D 351605 CDS YP_001230355.1 148263649 5164323 complement(1845642..1845947) 1 NC_009483.1 hypothetical protein 1845947 5164323 Gura_1586 Geobacter uraniireducens Rf4 hypothetical protein YP_001230355.1 1845642 R 351605 CDS YP_001230356.1 148263650 5164324 complement(1845968..1846183) 1 NC_009483.1 hypothetical protein 1846183 5164324 Gura_1587 Geobacter uraniireducens Rf4 hypothetical protein YP_001230356.1 1845968 R 351605 CDS YP_001230357.1 148263651 5164325 complement(1846338..1847606) 1 NC_009483.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 1847606 5164325 Gura_1588 Geobacter uraniireducens Rf4 aromatic hydrocarbon degradation membrane protein YP_001230357.1 1846338 R 351605 CDS YP_001230358.1 148263652 5164356 complement(1847834..1848067) 1 NC_009483.1 hypothetical protein 1848067 5164356 Gura_1589 Geobacter uraniireducens Rf4 hypothetical protein YP_001230358.1 1847834 R 351605 CDS YP_001230359.1 148263653 5164357 1848130..1849941 1 NC_009483.1 PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1849941 5164357 Gura_1590 Geobacter uraniireducens Rf4 AMP-dependent synthetase and ligase YP_001230359.1 1848130 D 351605 CDS YP_001230360.1 148263654 5164358 1849977..1852364 1 NC_009483.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 1852364 5164358 Gura_1591 Geobacter uraniireducens Rf4 NAD-binding 3-hydroxyacyl-CoA dehydrogenase YP_001230360.1 1849977 D 351605 CDS YP_001230361.1 148263655 5164468 1852502..1853674 1 NC_009483.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 1853674 5164468 Gura_1592 Geobacter uraniireducens Rf4 acetyl-CoA acetyltransferase YP_001230361.1 1852502 D 351605 CDS YP_001230362.1 148263656 5164469 1853707..1855485 1 NC_009483.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein 1855485 5164469 Gura_1593 Geobacter uraniireducens Rf4 acyl-CoA dehydrogenase domain-containing protein YP_001230362.1 1853707 D 351605 CDS YP_001230363.1 148263657 5164470 1855561..1856502 1 NC_009483.1 PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 1856502 5164470 Gura_1594 Geobacter uraniireducens Rf4 beta-lactamase domain-containing protein YP_001230363.1 1855561 D 351605 CDS YP_001230364.1 148263658 5164859 1856556..1858559 1 NC_009483.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase 1858559 5164859 Gura_1595 Geobacter uraniireducens Rf4 NADH:flavin oxidoreductase YP_001230364.1 1856556 D 351605 CDS YP_001230365.1 148263659 5164860 1858605..1859162 1 NC_009483.1 hypothetical protein 1859162 5164860 Gura_1596 Geobacter uraniireducens Rf4 hypothetical protein YP_001230365.1 1858605 D 351605 CDS YP_001230366.1 148263660 5164861 1859252..1860076 1 NC_009483.1 PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1860076 5164861 Gura_1597 Geobacter uraniireducens Rf4 alpha/beta hydrolase fold protein YP_001230366.1 1859252 D 351605 CDS YP_001230367.1 148263661 5164927 1860111..1860896 1 NC_009483.1 PFAM: Enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1860896 5164927 Gura_1598 Geobacter uraniireducens Rf4 enoyl-CoA hydratase/isomerase YP_001230367.1 1860111 D 351605 CDS YP_001230368.1 148263662 5164928 complement(1861132..1861527) 1 NC_009483.1 PFAM: regulatory protein, MerR; MerR family transcriptional regulator 1861527 5164928 Gura_1599 Geobacter uraniireducens Rf4 MerR family transcriptional regulator YP_001230368.1 1861132 R 351605 CDS YP_001230369.1 148263663 5164929 1861697..1863682 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 1863682 5164929 Gura_1600 Geobacter uraniireducens Rf4 hypothetical protein YP_001230369.1 1861697 D 351605 CDS YP_001230370.1 148263664 5165226 1863721..1864497 1 NC_009483.1 PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta 1864497 5165226 Gura_1601 Geobacter uraniireducens Rf4 electron transfer flavoprotein subunit beta YP_001230370.1 1863721 D 351605 CDS YP_001230371.1 148263665 5165227 1864507..1865421 1 NC_009483.1 PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 1865421 5165227 Gura_1602 Geobacter uraniireducens Rf4 electron transfer flavoprotein subunit alpha YP_001230371.1 1864507 D 351605 CDS YP_001230372.1 148263666 5165228 1865707..1866714 1 NC_009483.1 PFAM: electron transfer flavoprotein beta-subunit; protein of unknown function DUF224, cysteine-rich region domain protein; electron transfer flavoprotein subunit beta 1866714 5165228 Gura_1603 Geobacter uraniireducens Rf4 electron transfer flavoprotein subunit beta YP_001230372.1 1865707 D 351605 CDS YP_001230373.1 148263667 5164856 complement(1866734..1867567) 1 NC_009483.1 PFAM: GTP-binding protein, HSR1-related; HSR1-like GTP-binding protein 1867567 5164856 Gura_1604 Geobacter uraniireducens Rf4 HSR1-like GTP-binding protein YP_001230373.1 1866734 R 351605 CDS YP_001230374.1 148263668 5164857 1867800..1868387 1 NC_009483.1 PFAM: pseudouridine synthase; pseudouridine synthase 1868387 5164857 Gura_1605 Geobacter uraniireducens Rf4 pseudouridine synthase YP_001230374.1 1867800 D 351605 CDS YP_001230375.1 148263669 5164858 1868795..1869622 1 NC_009483.1 PFAM: protein of unknown function RIO1; hypothetical protein 1869622 5164858 Gura_1606 Geobacter uraniireducens Rf4 hypothetical protein YP_001230375.1 1868795 D 351605 CDS YP_001230376.1 148263670 5165410 1869657..1870739 1 NC_009483.1 TIGRFAM: alanine dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; alanine dehydrogenase/PNT domain protein; alanine dehydrogenase 1870739 5165410 Gura_1607 Geobacter uraniireducens Rf4 alanine dehydrogenase YP_001230376.1 1869657 D 351605 CDS YP_001230377.1 148263671 5165411 1871163..1872917 1 NC_009483.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 1872917 5165411 Gura_1608 Geobacter uraniireducens Rf4 acetyl-CoA synthetase YP_001230377.1 1871163 D 351605 CDS YP_001230378.1 148263672 5165412 1873055..1874053 1 NC_009483.1 PFAM: dehydrogenase, E1 component; pyruvate dehydrogenase 1874053 5165412 Gura_1609 Geobacter uraniireducens Rf4 pyruvate dehydrogenase YP_001230378.1 1873055 D 351605 CDS YP_001230379.1 148263673 5165383 1874050..1875051 1 NC_009483.1 PFAM: Transketolase, central region; Transketolase domain protein; transketolase, central region 1875051 5165383 Gura_1610 Geobacter uraniireducens Rf4 transketolase, central region YP_001230379.1 1874050 D 351605 CDS YP_001230380.1 148263674 5165384 1875044..1876255 1 NC_009483.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; branched-chain alpha-keto acid dehydrogenase subunit E2 1876255 5165384 Gura_1611 Geobacter uraniireducens Rf4 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_001230380.1 1875044 D 351605 CDS YP_001230381.1 148263675 5165385 1876252..1876497 1 NC_009483.1 hypothetical protein 1876497 5165385 Gura_1612 Geobacter uraniireducens Rf4 hypothetical protein YP_001230381.1 1876252 D 351605 CDS YP_001230382.1 148263676 5165582 1876537..1876902 1 NC_009483.1 hypothetical protein 1876902 5165582 Gura_1613 Geobacter uraniireducens Rf4 hypothetical protein YP_001230382.1 1876537 D 351605 CDS YP_001230383.1 148263677 5165583 1877288..1877662 1 NC_009483.1 hypothetical protein 1877662 5165583 Gura_1614 Geobacter uraniireducens Rf4 hypothetical protein YP_001230383.1 1877288 D 351605 CDS YP_001230384.1 148263678 5165584 1878056..1878313 1 NC_009483.1 PFAM: RNP-1 like RNA-binding protein; RNP-1 like RNA-binding protein 1878313 5165584 Gura_1615 Geobacter uraniireducens Rf4 RNP-1 like RNA-binding protein YP_001230384.1 1878056 D 351605 CDS YP_001230385.1 148263679 5165736 1878310..1878969 1 NC_009483.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 1878969 5165736 Gura_1616 Geobacter uraniireducens Rf4 protein-L-isoaspartate O-methyltransferase YP_001230385.1 1878310 D 351605 CDS YP_001230386.1 148263680 5165737 complement(1879029..1879241) 1 NC_009483.1 hypothetical protein 1879241 5165737 Gura_1617 Geobacter uraniireducens Rf4 hypothetical protein YP_001230386.1 1879029 R 351605 CDS YP_001230387.1 148263681 5164980 complement(1879455..1880315) 1 NC_009483.1 PFAM: Abortive infection protein; abortive infection protein 1880315 5164980 Gura_1619 Geobacter uraniireducens Rf4 abortive infection protein YP_001230387.1 1879455 R 351605 CDS YP_001230388.1 148263682 5164981 complement(1880312..1881253) 1 NC_009483.1 PFAM: protein of unknown function DUF1568; SMART: Chromosomal replication initiator, DnaA C-terminal domain; hypothetical protein 1881253 5164981 Gura_1620 Geobacter uraniireducens Rf4 hypothetical protein YP_001230388.1 1880312 R 351605 CDS YP_001230389.1 148263683 5164982 complement(1881920..1882171) 1 NC_009483.1 hypothetical protein 1882171 5164982 Gura_1621 Geobacter uraniireducens Rf4 hypothetical protein YP_001230389.1 1881920 R 351605 CDS YP_001230390.1 148263684 5165703 complement(1882186..1882998) 1 NC_009483.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; IstB ATP binding domain-containing protein 1882998 5165703 Gura_1622 Geobacter uraniireducens Rf4 IstB ATP binding domain-containing protein YP_001230390.1 1882186 R 351605 CDS YP_001230391.1 148263685 5165704 complement(1882988..1884436) 1 NC_009483.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 1884436 5165704 Gura_1623 Geobacter uraniireducens Rf4 integrase catalytic subunit YP_001230391.1 1882988 R 351605 CDS YP_001230392.1 148263686 5165705 complement(1884647..1885333) 1 NC_009483.1 PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; dipeptidyl-peptidase IV 1885333 5165705 Gura_1624 Geobacter uraniireducens Rf4 dipeptidyl-peptidase IV YP_001230392.1 1884647 R 351605 CDS YP_001230393.1 148263687 5166561 complement(1886105..1888012) 1 NC_009483.1 PFAM: sulfatase; sulfatase 1888012 5166561 Gura_1625 Geobacter uraniireducens Rf4 sulfatase YP_001230393.1 1886105 R 351605 CDS YP_001230394.1 148263688 5166562 1888493..1889365 1 NC_009483.1 PFAM: diacylglycerol kinase, catalytic region; diacylglycerol kinase catalytic subunit 1889365 5166562 Gura_1626 Geobacter uraniireducens Rf4 diacylglycerol kinase catalytic subunit YP_001230394.1 1888493 D 351605 CDS YP_001230395.1 148263689 5166563 complement(1889408..1889953) 1 NC_009483.1 hypothetical protein 1889953 5166563 Gura_1627 Geobacter uraniireducens Rf4 hypothetical protein YP_001230395.1 1889408 R 351605 CDS YP_001230396.1 148263690 5166477 complement(1890058..1891368) 1 NC_009483.1 hypothetical protein 1891368 5166477 Gura_1628 Geobacter uraniireducens Rf4 hypothetical protein YP_001230396.1 1890058 R 351605 CDS YP_001230397.1 148263691 5166478 complement(1891365..1892513) 1 NC_009483.1 hypothetical protein 1892513 5166478 Gura_1629 Geobacter uraniireducens Rf4 hypothetical protein YP_001230397.1 1891365 R 351605 CDS YP_001230398.1 148263692 5166479 complement(1892562..1893194) 1 NC_009483.1 hypothetical protein 1893194 5166479 Gura_1630 Geobacter uraniireducens Rf4 hypothetical protein YP_001230398.1 1892562 R 351605 CDS YP_001230399.1 148263693 5164459 1893563..1894030 1 NC_009483.1 TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; bacterioferritin 1894030 5164459 Gura_1631 Geobacter uraniireducens Rf4 bacterioferritin YP_001230399.1 1893563 D 351605 CDS YP_001230400.1 148263694 5164460 1894402..1895745 1 NC_009483.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase 1895745 5164460 Gura_1632 Geobacter uraniireducens Rf4 DEAD/DEAH box helicase YP_001230400.1 1894402 D 351605 CDS YP_001230401.1 148263695 5164461 1895882..1897177 1 NC_009483.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; cyclopropane-fatty-acyl-phospholipid synthase 1897177 5164461 Gura_1633 Geobacter uraniireducens Rf4 cyclopropane-fatty-acyl-phospholipid synthase YP_001230401.1 1895882 D 351605 CDS YP_001230402.1 148263696 5163895 complement(1897228..1898136) 1 NC_009483.1 PFAM: pentapeptide repeat protein; pentapeptide repeat-containing protein 1898136 5163895 Gura_1634 Geobacter uraniireducens Rf4 pentapeptide repeat-containing protein YP_001230402.1 1897228 R 351605 CDS YP_001230403.1 148263697 5163896 1898527..1899300 1 NC_009483.1 PFAM: protein of unknown function DUF500; hypothetical protein 1899300 5163896 Gura_1635 Geobacter uraniireducens Rf4 hypothetical protein YP_001230403.1 1898527 D 351605 CDS YP_001230404.1 148263698 5163897 1899297..1901363 1 NC_009483.1 PFAM: peptidase M1, membrane alanine aminopeptidase; peptidase M1, membrane alanine aminopeptidase 1901363 5163897 Gura_1636 Geobacter uraniireducens Rf4 peptidase M1, membrane alanine aminopeptidase YP_001230404.1 1899297 D 351605 CDS YP_001230405.1 148263699 5166763 1901551..1902384 1 NC_009483.1 PFAM: Rhomboid family protein; rhomboid family protein 1902384 5166763 Gura_1637 Geobacter uraniireducens Rf4 rhomboid family protein YP_001230405.1 1901551 D 351605 CDS YP_001230406.1 148263700 5166764 1902494..1902883 1 NC_009483.1 hypothetical protein 1902883 5166764 Gura_1638 Geobacter uraniireducens Rf4 hypothetical protein YP_001230406.1 1902494 D 351605 CDS YP_001230407.1 148263701 5166765 complement(1902990..1903715) 1 NC_009483.1 hypothetical protein 1903715 5166765 Gura_1639 Geobacter uraniireducens Rf4 hypothetical protein YP_001230407.1 1902990 R 351605 CDS YP_001230408.1 148263702 5163399 1903885..1905123 1 NC_009483.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; major facilitator transporter 1905123 5163399 Gura_1640 Geobacter uraniireducens Rf4 major facilitator transporter YP_001230408.1 1903885 D 351605 CDS YP_001230409.1 148263703 5163400 1905442..1905828 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 1905828 5163400 Gura_1641 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001230409.1 1905442 D 351605 CDS YP_001230410.1 148263704 5163401 1906005..1906160 1 NC_009483.1 hypothetical protein 1906160 5163401 Gura_1642 Geobacter uraniireducens Rf4 hypothetical protein YP_001230410.1 1906005 D 351605 CDS YP_001230411.1 148263705 5162834 complement(1906335..1907207) 1 NC_009483.1 PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 1907207 5162834 Gura_1643 Geobacter uraniireducens Rf4 hypothetical protein YP_001230411.1 1906335 R 351605 CDS YP_001230412.1 148263706 5162835 complement(1907482..1908366) 1 NC_009483.1 PFAM: protein of unknown function DUF815; hypothetical protein 1908366 5162835 Gura_1644 Geobacter uraniireducens Rf4 hypothetical protein YP_001230412.1 1907482 R 351605 CDS YP_001230413.1 148263707 5162836 complement(1908809..1909009) 1 NC_009483.1 hypothetical protein 1909009 5162836 Gura_1645 Geobacter uraniireducens Rf4 hypothetical protein YP_001230413.1 1908809 R 351605 CDS YP_001230414.1 148263708 5162927 complement(1909287..1910060) 1 NC_009483.1 hypothetical protein 1910060 5162927 Gura_1646 Geobacter uraniireducens Rf4 hypothetical protein YP_001230414.1 1909287 R 351605 CDS YP_001230415.1 148263709 5162928 1910243..1910425 1 NC_009483.1 hypothetical protein 1910425 5162928 Gura_1647 Geobacter uraniireducens Rf4 hypothetical protein YP_001230415.1 1910243 D 351605 CDS YP_001230416.1 148263710 5162929 complement(1910460..1910990) 1 NC_009483.1 PFAM: PEBP family protein; PEBP family protein 1910990 5162929 Gura_1648 Geobacter uraniireducens Rf4 PEBP family protein YP_001230416.1 1910460 R 351605 CDS YP_001230417.1 148263711 5163499 complement(1911448..1911756) 1 NC_009483.1 hypothetical protein 1911756 5163499 Gura_1649 Geobacter uraniireducens Rf4 hypothetical protein YP_001230417.1 1911448 R 351605 CDS YP_001230418.1 148263712 5163500 complement(1911911..1912501) 1 NC_009483.1 PFAM: regulatory protein, TetR; TetR family transcriptional regulator 1912501 5163500 Gura_1650 Geobacter uraniireducens Rf4 TetR family transcriptional regulator YP_001230418.1 1911911 R 351605 CDS YP_001230419.1 148263713 5163501 complement(1912772..1914397) 1 NC_009483.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta 1914397 5163501 Gura_1651 Geobacter uraniireducens Rf4 tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta YP_001230419.1 1912772 R 351605 CDS YP_001230420.1 148263714 5163472 1914771..1916075 1 NC_009483.1 hypothetical protein 1916075 5163472 Gura_1652 Geobacter uraniireducens Rf4 hypothetical protein YP_001230420.1 1914771 D 351605 CDS YP_001230421.1 148263715 5163473 1916155..1917114 1 NC_009483.1 hypothetical protein 1917114 5163473 Gura_1653 Geobacter uraniireducens Rf4 hypothetical protein YP_001230421.1 1916155 D 351605 CDS YP_001230422.1 148263716 5163474 1917166..1918083 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 1918083 5163474 Gura_1654 Geobacter uraniireducens Rf4 NAD-dependent epimerase/dehydratase YP_001230422.1 1917166 D 351605 CDS YP_001230423.1 148263717 5163629 1918480..1919103 1 NC_009483.1 PFAM: regulatory protein, TetR; TetR family transcriptional regulator 1919103 5163629 Gura_1655 Geobacter uraniireducens Rf4 TetR family transcriptional regulator YP_001230423.1 1918480 D 351605 CDS YP_001230424.1 148263718 5163630 1919093..1920550 1 NC_009483.1 PFAM: ABC-1 domain protein; hypothetical protein 1920550 5163630 Gura_1656 Geobacter uraniireducens Rf4 hypothetical protein YP_001230424.1 1919093 D 351605 CDS YP_001230425.1 148263719 5163631 1920594..1921370 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1921370 5163631 Gura_1657 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001230425.1 1920594 D 351605 CDS YP_001230426.1 148263720 5163907 1921367..1923919 1 NC_009483.1 PFAM: protein of unknown function DUF214; hypothetical protein 1923919 5163907 Gura_1658 Geobacter uraniireducens Rf4 hypothetical protein YP_001230426.1 1921367 D 351605 CDS YP_001230427.1 148263721 5163908 1924068..1924880 1 NC_009483.1 hypothetical protein 1924880 5163908 Gura_1659 Geobacter uraniireducens Rf4 hypothetical protein YP_001230427.1 1924068 D 351605 CDS YP_001230428.1 148263722 5163909 1924877..1926124 1 NC_009483.1 hypothetical protein 1926124 5163909 Gura_1660 Geobacter uraniireducens Rf4 hypothetical protein YP_001230428.1 1924877 D 351605 CDS YP_001230429.1 148263723 5163802 1926200..1926820 1 NC_009483.1 hypothetical protein 1926820 5163802 Gura_1661 Geobacter uraniireducens Rf4 hypothetical protein YP_001230429.1 1926200 D 351605 CDS YP_001230430.1 148263724 5163803 1926861..1927136 1 NC_009483.1 hypothetical protein 1927136 5163803 Gura_1662 Geobacter uraniireducens Rf4 hypothetical protein YP_001230430.1 1926861 D 351605 CDS YP_001230431.1 148263725 5163804 complement(1927149..1927385) 1 NC_009483.1 hypothetical protein 1927385 5163804 Gura_1663 Geobacter uraniireducens Rf4 hypothetical protein YP_001230431.1 1927149 R 351605 CDS YP_001230432.1 148263726 5164077 complement(1927562..1929295) 1 NC_009483.1 PFAM: PHP C-terminal domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding, class 1; phosphotransferase domain-containing protein 1929295 5164077 Gura_1664 Geobacter uraniireducens Rf4 phosphotransferase domain-containing protein YP_001230432.1 1927562 R 351605 CDS YP_001230433.1 148263727 5164078 1929420..1930451 1 NC_009483.1 PFAM: RNA 3'-terminal phosphate cyclase; RNA 3'-terminal phosphate cyclase, insert region; RNA-3'-phosphate cyclase 1930451 5164078 Gura_1665 Geobacter uraniireducens Rf4 RNA-3'-phosphate cyclase YP_001230433.1 1929420 D 351605 CDS YP_001230434.1 148263728 5164079 complement(1930681..1932780) 1 NC_009483.1 hypothetical protein 1932780 5164079 Gura_1666 Geobacter uraniireducens Rf4 hypothetical protein YP_001230434.1 1930681 R 351605 CDS YP_001230435.1 148263729 5164142 complement(1932911..1934383) 1 NC_009483.1 hypothetical protein 1934383 5164142 Gura_1667 Geobacter uraniireducens Rf4 hypothetical protein YP_001230435.1 1932911 R 351605 CDS YP_001230436.1 148263730 5164143 complement(1934620..1935906) 1 NC_009483.1 transposase 1935906 5164143 Gura_1668 Geobacter uraniireducens Rf4 transposase YP_001230436.1 1934620 R 351605 CDS YP_001230437.1 148263731 5164144 1936486..1937529 1 NC_009483.1 PFAM: polysaccharide export protein; polysaccharide export protein 1937529 5164144 Gura_1669 Geobacter uraniireducens Rf4 polysaccharide export protein YP_001230437.1 1936486 D 351605 CDS YP_001230438.1 148263732 5164172 1937601..1939973 1 NC_009483.1 PFAM: lipopolysaccharide biosynthesis protein; non-specific protein-tyrosine kinase 1939973 5164172 Gura_1670 Geobacter uraniireducens Rf4 non-specific protein-tyrosine kinase YP_001230438.1 1937601 D 351605 CDS YP_001230439.1 148263733 5164173 1940289..1941095 1 NC_009483.1 capsular polysaccharide biosynthesis protein-like protein 1941095 5164173 Gura_1671 Geobacter uraniireducens Rf4 capsular polysaccharide biosynthesis protein-like protein YP_001230439.1 1940289 D 351605 CDS YP_001230440.1 148263734 5164174 1941222..1942262 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; polysaccharide biosynthesis protein CapD 1942262 5164174 Gura_1672 Geobacter uraniireducens Rf4 polysaccharide biosynthesis protein CapD YP_001230440.1 1941222 D 351605 CDS YP_001230441.1 148263735 5164353 1942259..1943566 1 NC_009483.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase, NAD-binding; UDP-glucose/GDP-mannose dehydrogenase 1943566 5164353 Gura_1673 Geobacter uraniireducens Rf4 UDP-glucose/GDP-mannose dehydrogenase YP_001230441.1 1942259 D 351605 CDS YP_001230442.1 148263736 5164354 1943764..1944603 1 NC_009483.1 PFAM: ABC-2 type transporter; ABC-2 type transporter 1944603 5164354 Gura_1674 Geobacter uraniireducens Rf4 ABC-2 type transporter YP_001230442.1 1943764 D 351605 CDS YP_001230443.1 148263737 5164355 1944665..1945927 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1945927 5164355 Gura_1675 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001230443.1 1944665 D 351605 CDS YP_001230444.1 148263738 5164282 1945920..1946717 1 NC_009483.1 hypothetical protein 1946717 5164282 Gura_1676 Geobacter uraniireducens Rf4 hypothetical protein YP_001230444.1 1945920 D 351605 CDS YP_001230445.1 148263739 5164283 1946743..1947753 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 1947753 5164283 Gura_1677 Geobacter uraniireducens Rf4 NAD-dependent epimerase/dehydratase YP_001230445.1 1946743 D 351605 CDS YP_001230446.1 148263740 5164284 1947755..1948483 1 NC_009483.1 PFAM: Methyltransferase type 11; type 11 methyltransferase 1948483 5164284 Gura_1678 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001230446.1 1947755 D 351605 CDS YP_001230447.1 148263741 5164381 1948637..1949524 1 NC_009483.1 PFAM: glycosyl transferase, family 11; glycosyl transferase family protein 1949524 5164381 Gura_1679 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001230447.1 1948637 D 351605 CDS YP_001230448.1 148263742 5164382 1949539..1950147 1 NC_009483.1 hypothetical protein 1950147 5164382 Gura_1680 Geobacter uraniireducens Rf4 hypothetical protein YP_001230448.1 1949539 D 351605 CDS YP_001230449.1 148263743 5164383 1950365..1951756 1 NC_009483.1 hypothetical protein 1951756 5164383 Gura_1681 Geobacter uraniireducens Rf4 hypothetical protein YP_001230449.1 1950365 D 351605 CDS YP_001230450.1 148263744 5164404 1951821..1952918 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 1952918 5164404 Gura_1682 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001230450.1 1951821 D 351605 CDS YP_001230451.1 148263745 5164405 1952899..1954056 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 1954056 5164405 Gura_1683 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001230451.1 1952899 D 351605 CDS YP_001230452.1 148263746 5164406 1954128..1955357 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 1955357 5164406 Gura_1684 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001230452.1 1954128 D 351605 CDS YP_001230453.1 148263747 5164693 1955574..1956503 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 1956503 5164693 Gura_1685 Geobacter uraniireducens Rf4 NAD-dependent epimerase/dehydratase YP_001230453.1 1955574 D 351605 CDS YP_001230454.1 148263748 5164694 1956638..1957717 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 1957717 5164694 Gura_1686 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001230454.1 1956638 D 351605 CDS YP_001230455.1 148263749 5164695 1957847..1958737 1 NC_009483.1 TIGRFAM: methyltransferase FkbM family; FkbM family methyltransferase 1958737 5164695 Gura_1687 Geobacter uraniireducens Rf4 FkbM family methyltransferase YP_001230455.1 1957847 D 351605 CDS YP_001230456.1 148263750 5165088 1959045..1960247 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 1960247 5165088 Gura_1688 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001230456.1 1959045 D 351605 CDS YP_001230457.1 148263751 5165089 1960450..1961595 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 1961595 5165089 Gura_1689 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001230457.1 1960450 D 351605 CDS YP_001230458.1 148263752 5165090 1961615..1962757 1 NC_009483.1 hypothetical protein 1962757 5165090 Gura_1690 Geobacter uraniireducens Rf4 hypothetical protein YP_001230458.1 1961615 D 351605 CDS YP_001230459.1 148263753 5165534 1962754..1963368 1 NC_009483.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 1963368 hisH 5165534 hisH Geobacter uraniireducens Rf4 imidazole glycerol phosphate synthase subunit HisH YP_001230459.1 1962754 D 351605 CDS YP_001230460.1 148263754 5165535 1963372..1964151 1 NC_009483.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamide and glutamine to imidazole-glycerolphosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 1964151 5165535 Gura_1692 Geobacter uraniireducens Rf4 imidazole glycerol phosphate synthase subunit HisF YP_001230460.1 1963372 D 351605 CDS YP_001230461.1 148263755 5165536 1964174..1965364 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 1965364 5165536 Gura_1693 Geobacter uraniireducens Rf4 NAD-dependent epimerase/dehydratase YP_001230461.1 1964174 D 351605 CDS YP_001230462.1 148263756 5165622 1965430..1965798 1 NC_009483.1 hypothetical protein 1965798 5165622 Gura_1694 Geobacter uraniireducens Rf4 hypothetical protein YP_001230462.1 1965430 D 351605 CDS YP_001230463.1 148263757 5165623 1966008..1966145 1 NC_009483.1 UDP-N-acetylglucosamine 2-epimerase-like protein 1966145 5165623 Gura_1695 Geobacter uraniireducens Rf4 UDP-N-acetylglucosamine 2-epimerase-like protein YP_001230463.1 1966008 D 351605 CDS YP_001230464.1 148263758 5165624 1966399..1967529 1 NC_009483.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 1967529 5165624 Gura_1696 Geobacter uraniireducens Rf4 UDP-N-acetylglucosamine 2-epimerase YP_001230464.1 1966399 D 351605 CDS YP_001230465.1 148263759 5165934 1967532..1968758 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 1968758 5165934 Gura_1697 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001230465.1 1967532 D 351605 CDS YP_001230466.1 148263760 5165935 1968755..1969369 1 NC_009483.1 PFAM: sugar transferase; undecaprenyl-phosphate galactose phosphotransferase 1969369 5165935 Gura_1698 Geobacter uraniireducens Rf4 undecaprenyl-phosphate galactose phosphotransferase YP_001230466.1 1968755 D 351605 CDS YP_001230467.1 148263761 5165936 1969415..1969768 1 NC_009483.1 hypothetical protein 1969768 5165936 Gura_1699 Geobacter uraniireducens Rf4 hypothetical protein YP_001230467.1 1969415 D 351605 CDS YP_001230468.1 148263762 5163685 1969808..1970443 1 NC_009483.1 Serine acetyltransferase-like protein 1970443 5163685 Gura_1700 Geobacter uraniireducens Rf4 Serine acetyltransferase-like protein YP_001230468.1 1969808 D 351605 CDS YP_001230469.1 148263763 5163686 1970494..1971747 1 NC_009483.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; glutamine--scyllo-inositol transaminase 1971747 5163686 Gura_1701 Geobacter uraniireducens Rf4 glutamine--scyllo-inositol transaminase YP_001230469.1 1970494 D 351605 CDS YP_001230470.1 148263764 5163687 1972275..1974317 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; CoA-binding domain protein; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KR; polysaccharide biosynthesis protein CapD 1974317 5163687 Gura_1702 Geobacter uraniireducens Rf4 polysaccharide biosynthesis protein CapD YP_001230470.1 1972275 D 351605 CDS YP_001230471.1 148263765 5166741 complement(1974820..1975779) 1 NC_009483.1 TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase; 6-phosphofructokinase 1975779 5166741 Gura_1703 Geobacter uraniireducens Rf4 6-phosphofructokinase YP_001230471.1 1974820 R 351605 CDS YP_001230472.1 148263766 5166742 complement(1975835..1977142) 1 NC_009483.1 PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; recombination factor protein RarA 1977142 5166742 Gura_1704 Geobacter uraniireducens Rf4 recombination factor protein RarA YP_001230472.1 1975835 R 351605 CDS YP_001230473.1 148263767 5166743 complement(1977145..1979649) 1 NC_009483.1 TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35; glycogen/starch/alpha-glucan phosphorylase 1979649 5166743 Gura_1705 Geobacter uraniireducens Rf4 glycogen/starch/alpha-glucan phosphorylase YP_001230473.1 1977145 R 351605 CDS YP_001230474.1 148263768 5166376 1979736..1980644 1 NC_009483.1 PFAM: ATP-NAD/AcoX kinase; ATP-NAD/AcoX kinase 1980644 5166376 Gura_1706 Geobacter uraniireducens Rf4 ATP-NAD/AcoX kinase YP_001230474.1 1979736 D 351605 CDS YP_001230475.1 148263769 5166377 1980731..1982392 1 NC_009483.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; DNA repair protein RecN 1982392 5166377 Gura_1707 Geobacter uraniireducens Rf4 DNA repair protein RecN YP_001230475.1 1980731 D 351605 CDS YP_001230476.1 148263770 5166378 1982439..1982891 1 NC_009483.1 catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate; acetyltransferase 1982891 5166378 Gura_1708 Geobacter uraniireducens Rf4 acetyltransferase YP_001230476.1 1982439 D 351605 CDS YP_001230477.1 148263771 5166206 1982962..1984299 1 NC_009483.1 PFAM: peptidase U62, modulator of DNA gyrase; C69 family peptidase 1984299 5166206 Gura_1709 Geobacter uraniireducens Rf4 C69 family peptidase YP_001230477.1 1982962 D 351605 CDS YP_001230478.1 148263772 5166207 complement(1984350..1984625) 1 NC_009483.1 PFAM: regulatory protein, ArsR; regulatory protein ArsR 1984625 5166207 Gura_1710 Geobacter uraniireducens Rf4 regulatory protein ArsR YP_001230478.1 1984350 R 351605 CDS YP_001230479.1 148263773 5166208 complement(1984708..1985685) 1 NC_009483.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1985685 5166208 Gura_1711 Geobacter uraniireducens Rf4 oligopeptide/dipeptide ABC transporter ATPase YP_001230479.1 1984708 R 351605 CDS YP_001230480.1 148263774 5166724 complement(1985682..1986644) 1 NC_009483.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1986644 5166724 Gura_1712 Geobacter uraniireducens Rf4 oligopeptide/dipeptide ABC transporter ATPase YP_001230480.1 1985682 R 351605 CDS YP_001230481.1 148263775 5166725 complement(1986798..1988876) 1 NC_009483.1 TIGRFAM: metal dependent phophohydrolase; PFAM: GAF domain protein; histidine kinase, HAMP region domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 1988876 5166725 Gura_1713 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001230481.1 1986798 R 351605 CDS YP_001230482.1 148263776 5166726 1989315..1990424 1 NC_009483.1 TIGRFAM: SpoIID/LytB domain; PFAM: Stage II sporulation D domain protein; SpoIID/LytB domain-containing protein 1990424 5166726 Gura_1714 Geobacter uraniireducens Rf4 SpoIID/LytB domain-containing protein YP_001230482.1 1989315 D 351605 CDS YP_001230483.1 148263777 5166000 1990427..1991458 1 NC_009483.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1991458 queA 5166000 queA Geobacter uraniireducens Rf4 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_001230483.1 1990427 D 351605 CDS YP_001230484.1 148263778 5166001 1991467..1992582 1 NC_009483.1 TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 1992582 5166001 Gura_1716 Geobacter uraniireducens Rf4 queuine tRNA-ribosyltransferase YP_001230484.1 1991467 D 351605 CDS YP_001230485.1 148263779 5166002 1992661..1992981 1 NC_009483.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; preprotein translocase subunit YajC 1992981 5166002 Gura_1717 Geobacter uraniireducens Rf4 preprotein translocase subunit YajC YP_001230485.1 1992661 D 351605 CDS YP_001230486.1 148263780 5166161 1993013..1994614 1 NC_009483.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1994614 secD 5166161 secD Geobacter uraniireducens Rf4 preprotein translocase subunit SecD YP_001230486.1 1993013 D 351605 CDS YP_001230487.1 148263781 5166162 1994627..1995535 1 NC_009483.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1995535 secF 5166162 secF Geobacter uraniireducens Rf4 preprotein translocase subunit SecF YP_001230487.1 1994627 D 351605 CDS YP_001230488.1 148263782 5166163 1995547..1996110 1 NC_009483.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein 1996110 5166163 Gura_1720 Geobacter uraniireducens Rf4 TPR repeat-containing protein YP_001230488.1 1995547 D 351605 CDS YP_001230489.1 148263783 5166069 1996226..1997947 1 NC_009483.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; single-stranded-DNA-specific exonuclease RecJ 1997947 5166069 Gura_1721 Geobacter uraniireducens Rf4 single-stranded-DNA-specific exonuclease RecJ YP_001230489.1 1996226 D 351605 CDS YP_001230490.1 148263784 5166070 1997950..1998849 1 NC_009483.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter 1998849 5166070 Gura_1722 Geobacter uraniireducens Rf4 cation diffusion facilitator family transporter YP_001230490.1 1997950 D 351605 CDS YP_001230491.1 148263785 5166071 1999061..2002960 1 NC_009483.1 hypothetical protein 2002960 5166071 Gura_1723 Geobacter uraniireducens Rf4 hypothetical protein YP_001230491.1 1999061 D 351605 CDS YP_001230492.1 148263786 5164837 2003389..2003724 1 NC_009483.1 PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 2003724 5164837 Gura_1725 Geobacter uraniireducens Rf4 DNA polymerase subunit beta YP_001230492.1 2003389 D 351605 CDS YP_001230493.1 148263787 5164838 2003711..2004103 1 NC_009483.1 PFAM: HEPN domain protein; HEPN domain-containing protein 2004103 5164838 Gura_1726 Geobacter uraniireducens Rf4 HEPN domain-containing protein YP_001230493.1 2003711 D 351605 CDS YP_001230494.1 148263788 5162816 complement(2004282..2005127) 1 NC_009483.1 hypothetical protein 2005127 5162816 Gura_1727 Geobacter uraniireducens Rf4 hypothetical protein YP_001230494.1 2004282 R 351605 CDS YP_001230495.1 148263789 5162817 complement(2005434..2007371) 1 NC_009483.1 molecular chaperone; heat shock protein 90 2007371 5162817 Gura_1728 Geobacter uraniireducens Rf4 heat shock protein 90 YP_001230495.1 2005434 R 351605 CDS YP_001230496.1 148263790 5162818 2007829..2010723 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; Cache domain protein; histidine kinase, dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; signal transduction histidine kinase 2010723 5162818 Gura_1729 Geobacter uraniireducens Rf4 signal transduction histidine kinase YP_001230496.1 2007829 D 351605 CDS YP_001230497.1 148263791 5163105 2010844..2012619 1 NC_009483.1 PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; multi-sensor signal transduction histidine kinase 2012619 5163105 Gura_1730 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001230497.1 2010844 D 351605 CDS YP_001230498.1 148263792 5163106 2012724..2014199 1 NC_009483.1 TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; anthranilate synthase component I 2014199 5163106 Gura_1731 Geobacter uraniireducens Rf4 anthranilate synthase component I YP_001230498.1 2012724 D 351605 CDS YP_001230499.1 148263793 5163107 2014300..2014875 1 NC_009483.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 2014875 5163107 Gura_1732 Geobacter uraniireducens Rf4 anthranilate synthase component II YP_001230499.1 2014300 D 351605 CDS YP_001230500.1 148263794 5163847 2014928..2015980 1 NC_009483.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2015980 trpD 5163847 trpD Geobacter uraniireducens Rf4 anthranilate phosphoribosyltransferase YP_001230500.1 2014928 D 351605 CDS YP_001230501.1 148263795 5163848 2015999..2016805 1 NC_009483.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 2016805 trpC 5163848 trpC Geobacter uraniireducens Rf4 indole-3-glycerol-phosphate synthase YP_001230501.1 2015999 D 351605 CDS YP_001230502.1 148263796 5163849 2017053..2018405 1 NC_009483.1 catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta 2018405 5163849 Gura_1735 Geobacter uraniireducens Rf4 tryptophan synthase subunit beta YP_001230502.1 2017053 D 351605 CDS YP_001230503.1 148263797 5163767 2018544..2019155 1 NC_009483.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 2019155 5163767 Gura_1736 Geobacter uraniireducens Rf4 N-(5'-phosphoribosyl)anthranilate isomerase YP_001230503.1 2018544 D 351605 CDS YP_001230504.1 148263798 5163768 2019236..2020861 1 NC_009483.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 2020861 5163768 Gura_1737 Geobacter uraniireducens Rf4 D-3-phosphoglycerate dehydrogenase YP_001230504.1 2019236 D 351605 CDS YP_001230505.1 148263799 5163769 complement(2020987..2022051) 1 NC_009483.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 2022051 5163769 Gura_1738 Geobacter uraniireducens Rf4 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001230505.1 2020987 R 351605 CDS YP_001230506.1 148263800 5164909 complement(2022155..2022745) 1 NC_009483.1 PFAM: isochorismatase hydrolase; isochorismatase hydrolase 2022745 5164909 Gura_1739 Geobacter uraniireducens Rf4 isochorismatase hydrolase YP_001230506.1 2022155 R 351605 CDS YP_001230507.1 148263801 5164911 complement(2023099..2024274) 1 NC_009483.1 hypothetical protein 2024274 5164911 Gura_1741 Geobacter uraniireducens Rf4 hypothetical protein YP_001230507.1 2023099 R 351605 CDS YP_001230508.1 148263802 5165509 complement(2024274..2024969) 1 NC_009483.1 hypothetical protein 2024969 5165509 Gura_1742 Geobacter uraniireducens Rf4 hypothetical protein YP_001230508.1 2024274 R 351605 CDS YP_001230509.1 148263803 5165510 2025431..2027290 1 NC_009483.1 PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase 2027290 5165510 Gura_1743 Geobacter uraniireducens Rf4 alpha amylase YP_001230509.1 2025431 D 351605 CDS YP_001230510.1 148263804 5165511 2027353..2027985 1 NC_009483.1 hypothetical protein 2027985 5165511 Gura_1744 Geobacter uraniireducens Rf4 hypothetical protein YP_001230510.1 2027353 D 351605 CDS YP_001230511.1 148263805 5166510 complement(2028037..2028765) 1 NC_009483.1 PFAM: lipolytic enzyme, G-D-S-L family; GDSL family lipase 2028765 5166510 Gura_1745 Geobacter uraniireducens Rf4 GDSL family lipase YP_001230511.1 2028037 R 351605 CDS YP_001230512.1 148263806 5166511 complement(2029007..2030566) 1 NC_009483.1 hypothetical protein 2030566 5166511 Gura_1746 Geobacter uraniireducens Rf4 hypothetical protein YP_001230512.1 2029007 R 351605 CDS YP_001230513.1 148263807 5166512 complement(2031116..2031310) 1 NC_009483.1 hypothetical protein 2031310 5166512 Gura_1747 Geobacter uraniireducens Rf4 hypothetical protein YP_001230513.1 2031116 R 351605 CDS YP_001230514.1 148263808 5166316 complement(2031508..2031846) 1 NC_009483.1 PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 2031846 5166316 Gura_1748 Geobacter uraniireducens Rf4 DNA polymerase subunit beta YP_001230514.1 2031508 R 351605 CDS YP_001230515.1 148263809 5166317 2032499..2033047 1 NC_009483.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 2033047 5166317 Gura_1749 Geobacter uraniireducens Rf4 peptide methionine sulfoxide reductase YP_001230515.1 2032499 D 351605 CDS YP_001230516.1 148263810 5166318 2033145..2033423 1 NC_009483.1 hypothetical protein 2033423 5166318 Gura_1750 Geobacter uraniireducens Rf4 hypothetical protein YP_001230516.1 2033145 D 351605 CDS YP_001230517.1 148263811 5165038 2033416..2033811 1 NC_009483.1 PFAM: PilT protein domain protein; PilT domain-containing protein 2033811 5165038 Gura_1751 Geobacter uraniireducens Rf4 PilT domain-containing protein YP_001230517.1 2033416 D 351605 CDS YP_001230518.1 148263812 5162979 complement(2034432..2035346) 1 NC_009483.1 hypothetical protein 2035346 5162979 Gura_1754 Geobacter uraniireducens Rf4 hypothetical protein YP_001230518.1 2034432 R 351605 CDS YP_001230519.1 148263813 5162980 complement(2035581..2036435) 1 NC_009483.1 hypothetical protein 2036435 5162980 Gura_1755 Geobacter uraniireducens Rf4 hypothetical protein YP_001230519.1 2035581 R 351605 CDS YP_001230520.1 148263814 5162981 complement(2036467..2038599) 1 NC_009483.1 TIGRFAM: metal dependent phophohydrolase; PFAM: GAF domain protein; histidine kinase, HAMP region domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 2038599 5162981 Gura_1756 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001230520.1 2036467 R 351605 CDS YP_001230521.1 148263815 5164092 complement(2038612..2039112) 1 NC_009483.1 hypothetical protein 2039112 5164092 Gura_1757 Geobacter uraniireducens Rf4 hypothetical protein YP_001230521.1 2038612 R 351605 CDS YP_001230522.1 148263816 5164093 complement(2039412..2040839) 1 NC_009483.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 2040839 5164093 Gura_1758 Geobacter uraniireducens Rf4 nicotinate phosphoribosyltransferase YP_001230522.1 2039412 R 351605 CDS YP_001230523.1 148263817 5164094 complement(2040960..2041583) 1 NC_009483.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein 2041583 5164094 Gura_1759 Geobacter uraniireducens Rf4 TPR repeat-containing protein YP_001230523.1 2040960 R 351605 CDS YP_001230524.1 148263818 5166986 2041832..2042707 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NAD-dependent epimerase/dehydratase 2042707 5166986 Gura_1760 Geobacter uraniireducens Rf4 NAD-dependent epimerase/dehydratase YP_001230524.1 2041832 D 351605 CDS YP_001230525.1 148263819 5166987 complement(2042723..2043742) 1 NC_009483.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase 2043742 5166987 Gura_1761 Geobacter uraniireducens Rf4 diguanylate cyclase YP_001230525.1 2042723 R 351605 CDS YP_001230526.1 148263820 5166988 2043989..2044621 1 NC_009483.1 hypothetical protein 2044621 5166988 Gura_1762 Geobacter uraniireducens Rf4 hypothetical protein YP_001230526.1 2043989 D 351605 CDS YP_001230527.1 148263821 5166241 complement(2044759..2045004) 1 NC_009483.1 hypothetical protein 2045004 5166241 Gura_1763 Geobacter uraniireducens Rf4 hypothetical protein YP_001230527.1 2044759 R 351605 CDS YP_001230528.1 148263822 5166242 2045106..2045345 1 NC_009483.1 hypothetical protein 2045345 5166242 Gura_1764 Geobacter uraniireducens Rf4 hypothetical protein YP_001230528.1 2045106 D 351605 CDS YP_001230529.1 148263823 5166243 2045408..2045986 1 NC_009483.1 hypothetical protein 2045986 5166243 Gura_1765 Geobacter uraniireducens Rf4 hypothetical protein YP_001230529.1 2045408 D 351605 CDS YP_001230530.1 148263824 5164127 2046098..2046412 1 NC_009483.1 hypothetical protein 2046412 5164127 Gura_1766 Geobacter uraniireducens Rf4 hypothetical protein YP_001230530.1 2046098 D 351605 CDS YP_001230531.1 148263825 5164128 2046402..2047403 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 2047403 5164128 Gura_1767 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001230531.1 2046402 D 351605 CDS YP_001230532.1 148263826 5164129 2047400..2048296 1 NC_009483.1 Fe-S oxidoreductase-like protein 2048296 5164129 Gura_1768 Geobacter uraniireducens Rf4 Fe-S oxidoreductase-like protein YP_001230532.1 2047400 D 351605 CDS YP_001230533.1 148263827 5166508 2048663..2050471 1 NC_009483.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 2050471 mutL 5166508 mutL Geobacter uraniireducens Rf4 DNA mismatch repair protein YP_001230533.1 2048663 D 351605 CDS YP_001230534.1 148263828 5166509 2050564..2051496 1 NC_009483.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 2051496 miaA 5166509 miaA Geobacter uraniireducens Rf4 tRNA delta(2)-isopentenylpyrophosphate transferase YP_001230534.1 2050564 D 351605 CDS YP_001230535.1 148263829 5166164 2051508..2051732 1 NC_009483.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein, core; RNA chaperone Hfq 2051732 5166164 Gura_1772 Geobacter uraniireducens Rf4 RNA chaperone Hfq YP_001230535.1 2051508 D 351605 CDS YP_001230536.1 148263830 5166165 2051875..2052948 1 NC_009483.1 PFAM: protein of unknown function UPF0118; hypothetical protein 2052948 5166165 Gura_1773 Geobacter uraniireducens Rf4 hypothetical protein YP_001230536.1 2051875 D 351605 CDS YP_001230537.1 148263831 5166166 2052948..2054240 1 NC_009483.1 PFAM: protein of unknown function DUF512; hypothetical protein 2054240 5166166 Gura_1774 Geobacter uraniireducens Rf4 hypothetical protein YP_001230537.1 2052948 D 351605 CDS YP_001230538.1 148263832 5165721 2054278..2055144 1 NC_009483.1 PFAM: protein of unknown function DUF399; hypothetical protein 2055144 5165721 Gura_1775 Geobacter uraniireducens Rf4 hypothetical protein YP_001230538.1 2054278 D 351605 CDS YP_001230539.1 148263833 5165722 complement(2055245..2055460) 1 NC_009483.1 hypothetical protein 2055460 5165722 Gura_1776 Geobacter uraniireducens Rf4 hypothetical protein YP_001230539.1 2055245 R 351605 CDS YP_001230540.1 148263834 5165723 complement(2055765..2056940) 1 NC_009483.1 PFAM: transposase, IS4 family protein; transposase, IS4 family protein 2056940 5165723 Gura_1777 Geobacter uraniireducens Rf4 transposase, IS4 family protein YP_001230540.1 2055765 R 351605 CDS YP_001230541.1 148263835 5164780 2057219..2057731 1 NC_009483.1 TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; transcription elongation factor GreB 2057731 5164780 Gura_1778 Geobacter uraniireducens Rf4 transcription elongation factor GreB YP_001230541.1 2057219 D 351605 CDS YP_001230542.1 148263836 5164781 2057791..2058360 1 NC_009483.1 hypothetical protein 2058360 5164781 Gura_1779 Geobacter uraniireducens Rf4 hypothetical protein YP_001230542.1 2057791 D 351605 CDS YP_001230543.1 148263837 5164782 complement(2058855..2060144) 1 NC_009483.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 2060144 eno 5164782 eno Geobacter uraniireducens Rf4 phosphopyruvate hydratase YP_001230543.1 2058855 R 351605 CDS YP_001230544.1 148263838 5166516 2060442..2062838 1 NC_009483.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; metal-dependent phosphohydrolase, 7TM intracellular region; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 2062838 5166516 Gura_1781 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001230544.1 2060442 D 351605 CDS YP_001230545.1 148263839 5166517 2062801..2063190 1 NC_009483.1 PFAM: protein of unknown function UPF0054; hypothetical protein 2063190 5166517 Gura_1782 Geobacter uraniireducens Rf4 hypothetical protein YP_001230545.1 2062801 D 351605 CDS YP_001230546.1 148263840 5166518 2063238..2063945 1 NC_009483.1 PFAM: phosphoesterase, PA-phosphatase related; diacylglycerol kinase; diacylglycerol kinase 2063945 5166518 Gura_1783 Geobacter uraniireducens Rf4 diacylglycerol kinase YP_001230546.1 2063238 D 351605 CDS YP_001230547.1 148263841 5163715 2064012..2064866 1 NC_009483.1 PFAM: CBS domain containing protein; transporter-associated region; hypothetical protein 2064866 5163715 Gura_1784 Geobacter uraniireducens Rf4 hypothetical protein YP_001230547.1 2064012 D 351605 CDS YP_001230548.1 148263842 5163716 2064866..2066431 1 NC_009483.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 2066431 lnt 5163716 lnt Geobacter uraniireducens Rf4 apolipoprotein N-acyltransferase YP_001230548.1 2064866 D 351605 CDS YP_001230549.1 148263843 5163717 2066607..2067560 1 NC_009483.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; peptide chain release factor 2 2067560 5163717 Gura_1786 Geobacter uraniireducens Rf4 peptide chain release factor 2 YP_001230549.1 2066607 D 351605 CDS YP_001230550.1 148263844 5165832 2067607..2068443 1 NC_009483.1 PFAM: NLP/P60 protein; Sporulation domain protein; NLP/P60 protein 2068443 5165832 Gura_1787 Geobacter uraniireducens Rf4 NLP/P60 protein YP_001230550.1 2067607 D 351605 CDS YP_001230551.1 148263845 5165833 join(2068600..2068956,2068955..2069770) 1 NC_009483.1 hypothetical protein 2069770 5165833 Gura_1788 Geobacter uraniireducens Rf4 hypothetical protein YP_001230551.1 2068600 D 351605 CDS YP_001230552.1 148263846 5165834 2069935..2071176 1 NC_009483.1 PFAM: uncharacterised conserved protein UCP033563; hypothetical protein 2071176 5165834 Gura_1789 Geobacter uraniireducens Rf4 hypothetical protein YP_001230552.1 2069935 D 351605 CDS YP_001230553.1 148263847 5164384 2071287..2071754 1 NC_009483.1 PFAM: peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 2071754 5164384 Gura_1790 Geobacter uraniireducens Rf4 FKBP-type peptidylprolyl isomerase YP_001230553.1 2071287 D 351605 CDS YP_001230554.1 148263848 5164385 2071853..2072830 1 NC_009483.1 hypothetical protein 2072830 5164385 Gura_1791 Geobacter uraniireducens Rf4 hypothetical protein YP_001230554.1 2071853 D 351605 CDS YP_001230555.1 148263849 5164386 2072871..2074124 1 NC_009483.1 PFAM: regulator of chromosome condensation, RCC1; regulator of chromosome condensation, RCC1 2074124 5164386 Gura_1792 Geobacter uraniireducens Rf4 regulator of chromosome condensation, RCC1 YP_001230555.1 2072871 D 351605 CDS YP_001230556.1 148263850 5165229 2074252..2075148 1 NC_009483.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 2075148 5165229 Gura_1793 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001230556.1 2074252 D 351605 CDS YP_001230557.1 148263851 5165230 2075350..2078034 1 NC_009483.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 2078034 secA 5165230 secA Geobacter uraniireducens Rf4 preprotein translocase subunit SecA YP_001230557.1 2075350 D 351605 CDS YP_001230558.1 148263852 5165231 2078093..2079274 1 NC_009483.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 2079274 argJ 5165231 argJ Geobacter uraniireducens Rf4 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_001230558.1 2078093 D 351605 CDS YP_001230559.1 148263853 5164214 2079331..2079744 1 NC_009483.1 hypothetical protein 2079744 5164214 Gura_1796 Geobacter uraniireducens Rf4 hypothetical protein YP_001230559.1 2079331 D 351605 CDS YP_001230560.1 148263854 5164215 2079840..2081015 1 NC_009483.1 PFAM: beta-lactamase; beta-lactamase 2081015 5164215 Gura_1797 Geobacter uraniireducens Rf4 beta-lactamase YP_001230560.1 2079840 D 351605 CDS YP_001230561.1 148263855 5164216 2081148..2082413 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 2082413 5164216 Gura_1798 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001230561.1 2081148 D 351605 CDS YP_001230562.1 148263856 5164954 2082502..2085162 1 NC_009483.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 2085162 valS 5164954 valS Geobacter uraniireducens Rf4 valyl-tRNA synthetase YP_001230562.1 2082502 D 351605 CDS YP_001230563.1 148263857 5164955 2085222..2086013 1 NC_009483.1 PFAM: peptidase A24A, prepilin type IV; peptidase A24A domain protein; peptidase A24A domain-containing protein 2086013 5164955 Gura_1800 Geobacter uraniireducens Rf4 peptidase A24A domain-containing protein YP_001230563.1 2085222 D 351605 CDS YP_001230564.1 148263858 5164956 2086021..2087607 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 2087607 5164956 Gura_1801 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001230564.1 2086021 D 351605 CDS YP_001230565.1 148263859 5164060 2087611..2088990 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 2088990 5164060 Gura_1802 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001230565.1 2087611 D 351605 CDS YP_001230566.1 148263860 5164061 2089186..2089968 1 NC_009483.1 hypothetical protein 2089968 5164061 Gura_1803 Geobacter uraniireducens Rf4 hypothetical protein YP_001230566.1 2089186 D 351605 CDS YP_001230567.1 148263861 5164062 2090041..2094489 1 NC_009483.1 Tfp pilus assembly protein tip-associated adhesin PilY1-like protein 2094489 5164062 Gura_1804 Geobacter uraniireducens Rf4 Tfp pilus assembly protein tip-associated adhesin PilY1-like protein YP_001230567.1 2090041 D 351605 CDS YP_001230568.1 148263862 5164486 2094491..2094970 1 NC_009483.1 hypothetical protein 2094970 5164486 Gura_1805 Geobacter uraniireducens Rf4 hypothetical protein YP_001230568.1 2094491 D 351605 CDS YP_001230569.1 148263863 5164487 2094948..2095328 1 NC_009483.1 hypothetical protein 2095328 5164487 Gura_1806 Geobacter uraniireducens Rf4 hypothetical protein YP_001230569.1 2094948 D 351605 CDS YP_001230570.1 148263864 5164488 2095387..2096634 1 NC_009483.1 hypothetical protein 2096634 5164488 Gura_1807 Geobacter uraniireducens Rf4 hypothetical protein YP_001230570.1 2095387 D 351605 CDS YP_001230571.1 148263865 5163793 2096661..2097284 1 NC_009483.1 hypothetical protein 2097284 5163793 Gura_1808 Geobacter uraniireducens Rf4 hypothetical protein YP_001230571.1 2096661 D 351605 CDS YP_001230572.1 148263866 5163794 2097603..2097803 1 NC_009483.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 2097803 5163794 Gura_1809 Geobacter uraniireducens Rf4 XRE family transcriptional regulator YP_001230572.1 2097603 D 351605 CDS YP_001230573.1 148263867 5163795 2097825..2098877 1 NC_009483.1 TIGRFAM: type IV pilus assembly protein PilM; type IV pilus assembly protein PilM 2098877 5163795 Gura_1810 Geobacter uraniireducens Rf4 type IV pilus assembly protein PilM YP_001230573.1 2097825 D 351605 CDS YP_001230574.1 148263868 5164247 2098874..2099449 1 NC_009483.1 PFAM: Fimbrial assembly family protein; fimbrial assembly family protein 2099449 5164247 Gura_1811 Geobacter uraniireducens Rf4 fimbrial assembly family protein YP_001230574.1 2098874 D 351605 CDS YP_001230575.1 148263869 5164248 2099490..2100089 1 NC_009483.1 PFAM: Pilus assembly protein, PilO; pilus assembly protein, PilO 2100089 5164248 Gura_1812 Geobacter uraniireducens Rf4 pilus assembly protein, PilO YP_001230575.1 2099490 D 351605 CDS YP_001230576.1 148263870 5164249 2100070..2100621 1 NC_009483.1 hypothetical protein 2100621 5164249 Gura_1813 Geobacter uraniireducens Rf4 hypothetical protein YP_001230576.1 2100070 D 351605 CDS YP_001230577.1 148263871 5163660 2100634..2103468 1 NC_009483.1 TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB, short N-terminal domain; type IV pilus secretin PilQ 2103468 5163660 Gura_1814 Geobacter uraniireducens Rf4 type IV pilus secretin PilQ YP_001230577.1 2100634 D 351605 CDS YP_001230578.1 148263872 5163661 2103480..2104058 1 NC_009483.1 hypothetical protein 2104058 5163661 Gura_1815 Geobacter uraniireducens Rf4 hypothetical protein YP_001230578.1 2103480 D 351605 CDS YP_001230579.1 148263873 5163662 2104144..2109024 1 NC_009483.1 PFAM: Ig family protein; Ig family protein 2109024 5163662 Gura_1816 Geobacter uraniireducens Rf4 Ig family protein YP_001230579.1 2104144 D 351605 CDS YP_001230580.1 148263874 5163976 2109139..2109465 1 NC_009483.1 hypothetical protein 2109465 5163976 Gura_1817 Geobacter uraniireducens Rf4 hypothetical protein YP_001230580.1 2109139 D 351605 CDS YP_001230581.1 148263875 5163977 2109543..2110724 1 NC_009483.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 2110724 5163977 Gura_1818 Geobacter uraniireducens Rf4 chorismate synthase YP_001230581.1 2109543 D 351605 CDS YP_001230582.1 148263876 5163978 2110726..2111235 1 NC_009483.1 PFAM: shikimate kinase; shikimate kinase 2111235 5163978 Gura_1819 Geobacter uraniireducens Rf4 shikimate kinase YP_001230582.1 2110726 D 351605 CDS YP_001230583.1 148263877 5163814 2111237..2112319 1 NC_009483.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 2112319 aroB 5163814 aroB Geobacter uraniireducens Rf4 3-dehydroquinate synthase YP_001230583.1 2111237 D 351605 CDS YP_001230584.1 148263878 5163815 2112322..2113314 1 NC_009483.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 2113314 5163815 Gura_1821 Geobacter uraniireducens Rf4 hypothetical protein YP_001230584.1 2112322 D 351605 CDS YP_001230585.1 148263879 5163816 2113314..2113676 1 NC_009483.1 hypothetical protein 2113676 5163816 Gura_1822 Geobacter uraniireducens Rf4 hypothetical protein YP_001230585.1 2113314 D 351605 CDS YP_001230586.1 148263880 5163396 2113780..2114214 1 NC_009483.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 2114214 5163396 Gura_1823 Geobacter uraniireducens Rf4 3-dehydroquinate dehydratase YP_001230586.1 2113780 D 351605 CDS YP_001230587.1 148263881 5163397 2114235..2115305 1 NC_009483.1 PFAM: creatinase; peptidase M24; peptidase M24 2115305 5163397 Gura_1824 Geobacter uraniireducens Rf4 peptidase M24 YP_001230587.1 2114235 D 351605 CDS YP_001230588.1 148263882 5163398 2115368..2115841 1 NC_009483.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 2115841 5163398 Gura_1825 Geobacter uraniireducens Rf4 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_001230588.1 2115368 D 351605 CDS YP_001230589.1 148263883 5163611 2115906..2117246 1 NC_009483.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; acetyl-CoA carboxylase, biotin carboxylase 2117246 5163611 Gura_1826 Geobacter uraniireducens Rf4 acetyl-CoA carboxylase, biotin carboxylase YP_001230589.1 2115906 D 351605 CDS YP_001230590.1 148263884 5163612 2117249..2117635 1 NC_009483.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; glycine cleavage system H protein 2117635 5163612 Gura_1827 Geobacter uraniireducens Rf4 glycine cleavage system H protein YP_001230590.1 2117249 D 351605 CDS YP_001230591.1 148263885 5163613 2117719..2118540 1 NC_009483.1 PFAM: protein of unknown function DUF178; hypothetical protein 2118540 5163613 Gura_1828 Geobacter uraniireducens Rf4 hypothetical protein YP_001230591.1 2117719 D 351605 CDS YP_001230592.1 148263886 5162985 complement(2118673..2119125) 1 NC_009483.1 PFAM: NUDIX hydrolase; NUDIX hydrolase 2119125 5162985 Gura_1829 Geobacter uraniireducens Rf4 NUDIX hydrolase YP_001230592.1 2118673 R 351605 CDS YP_001230593.1 148263887 5162986 complement(2119213..2119506) 1 NC_009483.1 hypothetical protein 2119506 5162986 Gura_1830 Geobacter uraniireducens Rf4 hypothetical protein YP_001230593.1 2119213 R 351605 CDS YP_001230594.1 148263888 5162987 2119750..2121168 1 NC_009483.1 PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase subunit alpha/beta 2121168 5162987 Gura_1831 Geobacter uraniireducens Rf4 phosphoglucomutase/phosphomannomutase subunit alpha/beta YP_001230594.1 2119750 D 351605 CDS YP_001230595.1 148263889 5163388 2121492..2122352 1 NC_009483.1 TIGRFAM: Fe-S cluster assembly protein NifU; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; Fe-S cluster assembly protein NifU 2122352 5163388 Gura_1832 Geobacter uraniireducens Rf4 Fe-S cluster assembly protein NifU YP_001230595.1 2121492 D 351605 CDS YP_001230596.1 148263890 5163389 2122349..2123518 1 NC_009483.1 PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; class V aminotransferase 2123518 5163389 Gura_1833 Geobacter uraniireducens Rf4 class V aminotransferase YP_001230596.1 2122349 D 351605 CDS YP_001230597.1 148263891 5163390 complement(2123595..2128430) 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 2128430 5163390 Gura_1834 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001230597.1 2123595 R 351605 CDS YP_001230598.1 148263892 5166185 complement(2128497..2129003) 1 NC_009483.1 hypothetical protein 2129003 5166185 Gura_1835 Geobacter uraniireducens Rf4 hypothetical protein YP_001230598.1 2128497 R 351605 CDS YP_001230599.1 148263893 5166186 complement(2129041..2131761) 1 NC_009483.1 PFAM: NHL repeat containing protein; NHL repeat-containing protein 2131761 5166186 Gura_1836 Geobacter uraniireducens Rf4 NHL repeat-containing protein YP_001230599.1 2129041 R 351605 CDS YP_001230600.1 148263894 5166187 complement(2131880..2132914) 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 2132914 5166187 Gura_1837 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001230600.1 2131880 R 351605 CDS YP_001230601.1 148263895 5165997 complement(2132939..2133412) 1 NC_009483.1 hypothetical protein 2133412 5165997 Gura_1838 Geobacter uraniireducens Rf4 hypothetical protein YP_001230601.1 2132939 R 351605 CDS YP_001230602.1 148263896 5165998 complement(2133409..2134704) 1 NC_009483.1 hypothetical protein 2134704 5165998 Gura_1839 Geobacter uraniireducens Rf4 hypothetical protein YP_001230602.1 2133409 R 351605 CDS YP_001230603.1 148263897 5165999 complement(2135026..2136396) 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 2136396 5165999 Gura_1840 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001230603.1 2135026 R 351605 CDS YP_001230604.1 148263898 5162772 complement(2136424..2138922) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; multi-sensor signal transduction histidine kinase 2138922 5162772 Gura_1841 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001230604.1 2136424 R 351605 CDS YP_001230605.1 148263899 5162773 2139106..2140947 1 NC_009483.1 TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; UbiD family decarboxylase 2140947 5162773 Gura_1842 Geobacter uraniireducens Rf4 UbiD family decarboxylase YP_001230605.1 2139106 D 351605 CDS YP_001230606.1 148263900 5162774 2140986..2142527 1 NC_009483.1 PFAM: SEFIR domain protein; SEFIR domain-containing protein 2142527 5162774 Gura_1843 Geobacter uraniireducens Rf4 SEFIR domain-containing protein YP_001230606.1 2140986 D 351605 CDS YP_001230607.1 148263901 5166748 2142567..2144489 1 NC_009483.1 ATP-dependent OLD family endonuclease 2144489 5166748 Gura_1844 Geobacter uraniireducens Rf4 ATP-dependent OLD family endonuclease YP_001230607.1 2142567 D 351605 CDS YP_001230608.1 148263902 5166749 2144486..2146348 1 NC_009483.1 PFAM: UvrD/REP helicase; UvrD/REP helicase 2146348 5166749 Gura_1845 Geobacter uraniireducens Rf4 UvrD/REP helicase YP_001230608.1 2144486 D 351605 CDS YP_001230609.1 148263903 5166750 2146625..2147152 1 NC_009483.1 hypothetical protein 2147152 5166750 Gura_1846 Geobacter uraniireducens Rf4 hypothetical protein YP_001230609.1 2146625 D 351605 CDS YP_001230610.1 148263904 5162613 complement(2147457..2147699) 1 NC_009483.1 hypothetical protein 2147699 5162613 Gura_1847 Geobacter uraniireducens Rf4 hypothetical protein YP_001230610.1 2147457 R 351605 CDS YP_001230611.1 148263905 5162614 complement(2147779..2148777) 1 NC_009483.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 2148777 5162614 Gura_1848 Geobacter uraniireducens Rf4 integrase catalytic subunit YP_001230611.1 2147779 R 351605 CDS YP_001230612.1 148263906 5162615 complement(2148777..2149211) 1 NC_009483.1 hypothetical protein 2149211 5162615 Gura_1849 Geobacter uraniireducens Rf4 hypothetical protein YP_001230612.1 2148777 R 351605 CDS YP_001230613.1 148263907 5165634 complement(2149337..2150473) 1 NC_009483.1 PFAM: transposase, IS4 family protein; transposase, IS4 family protein 2150473 5165634 Gura_1850 Geobacter uraniireducens Rf4 transposase, IS4 family protein YP_001230613.1 2149337 R 351605 CDS YP_001230614.1 148263908 5165635 2151115..2151912 1 NC_009483.1 hypothetical protein 2151912 5165635 Gura_1851 Geobacter uraniireducens Rf4 hypothetical protein YP_001230614.1 2151115 D 351605 CDS YP_001230615.1 148263909 5165636 2151896..2152450 1 NC_009483.1 hypothetical protein 2152450 5165636 Gura_1852 Geobacter uraniireducens Rf4 hypothetical protein YP_001230615.1 2151896 D 351605 CDS YP_001230616.1 148263910 5166862 2152478..2152927 1 NC_009483.1 hypothetical protein 2152927 5166862 Gura_1853 Geobacter uraniireducens Rf4 hypothetical protein YP_001230616.1 2152478 D 351605 CDS YP_001230617.1 148263911 5166863 complement(2152986..2153360) 1 NC_009483.1 hypothetical protein 2153360 5166863 Gura_1854 Geobacter uraniireducens Rf4 hypothetical protein YP_001230617.1 2152986 R 351605 CDS YP_001230618.1 148263912 5166864 2153673..2154209 1 NC_009483.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 2154209 5166864 Gura_1855 Geobacter uraniireducens Rf4 bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase YP_001230618.1 2153673 D 351605 CDS YP_001230619.1 148263913 5166200 2154282..2155217 1 NC_009483.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 2155217 pyrB 5166200 pyrB Geobacter uraniireducens Rf4 aspartate carbamoyltransferase catalytic subunit YP_001230619.1 2154282 D 351605 CDS YP_001230620.1 148263914 5166201 2155328..2156605 1 NC_009483.1 TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; Amidohydrolase 3; dihydroorotase, multifunctional complex type 2156605 5166201 Gura_1857 Geobacter uraniireducens Rf4 dihydroorotase, multifunctional complex type YP_001230620.1 2155328 D 351605 CDS YP_001230621.1 148263915 5166202 2156671..2157792 1 NC_009483.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 2157792 5166202 Gura_1858 Geobacter uraniireducens Rf4 carbamoyl phosphate synthase small subunit YP_001230621.1 2156671 D 351605 CDS YP_001230622.1 148263916 5164794 2157879..2158781 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 2158781 5164794 Gura_1859 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001230622.1 2157879 D 351605 CDS YP_001230623.1 148263917 5164795 2158778..2159107 1 NC_009483.1 PFAM: protein of unknown function DUF486; hypothetical protein 2159107 5164795 Gura_1860 Geobacter uraniireducens Rf4 hypothetical protein YP_001230623.1 2158778 D 351605 CDS YP_001230624.1 148263918 5164796 2159109..2159531 1 NC_009483.1 PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 2159531 5164796 Gura_1861 Geobacter uraniireducens Rf4 DNA polymerase subunit beta YP_001230624.1 2159109 D 351605 CDS YP_001230625.1 148263919 5166866 2159524..2159943 1 NC_009483.1 PFAM: protein of unknown function DUF86; hypothetical protein 2159943 5166866 Gura_1862 Geobacter uraniireducens Rf4 hypothetical protein YP_001230625.1 2159524 D 351605 CDS YP_001230626.1 148263920 5166867 2160037..2162439 1 NC_009483.1 PFAM: SEC-C motif domain protein; SecC motif-containing protein 2162439 5166867 Gura_1863 Geobacter uraniireducens Rf4 SecC motif-containing protein YP_001230626.1 2160037 D 351605 CDS YP_001230627.1 148263921 5166868 2162556..2165804 1 NC_009483.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain, oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; RimK domain protein ATP-grasp; carbamoyl-phosphate synthase large subunit 2165804 5166868 Gura_1864 Geobacter uraniireducens Rf4 carbamoyl-phosphate synthase large subunit YP_001230627.1 2162556 D 351605 CDS YP_001230628.1 148263922 5163436 2165916..2166392 1 NC_009483.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 2166392 greA 5163436 greA Geobacter uraniireducens Rf4 transcription elongation factor GreA YP_001230628.1 2165916 D 351605 CDS YP_001230629.1 148263923 5163437 2166486..2166683 1 NC_009483.1 hypothetical protein 2166683 5163437 Gura_1866 Geobacter uraniireducens Rf4 hypothetical protein YP_001230629.1 2166486 D 351605 CDS YP_001230630.1 148263924 5163438 2166833..2167060 1 NC_009483.1 PFAM: SpoVT/AbrB domain protein; SpoVT/AbrB domain-containing protein 2167060 5163438 Gura_1867 Geobacter uraniireducens Rf4 SpoVT/AbrB domain-containing protein YP_001230630.1 2166833 D 351605 CDS YP_001230631.1 148263925 5166869 2167060..2167461 1 NC_009483.1 PFAM: PilT protein domain protein; SMART: Nucleotide binding protein, PINc; PilT domain-containing protein 2167461 5166869 Gura_1868 Geobacter uraniireducens Rf4 PilT domain-containing protein YP_001230631.1 2167060 D 351605 CDS YP_001230632.1 148263926 5166870 2167837..2170326 1 NC_009483.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 2170326 5166870 Gura_1869 Geobacter uraniireducens Rf4 ATP-dependent DNA helicase RecG YP_001230632.1 2167837 D 351605 CDS YP_001230633.1 148263927 5166871 complement(2170404..2171471) 1 NC_009483.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; threonine aldolase 2171471 5166871 Gura_1870 Geobacter uraniireducens Rf4 threonine aldolase YP_001230633.1 2170404 R 351605 CDS YP_001230634.1 148263928 5166905 2171718..2174726 1 NC_009483.1 TIGRFAM: putative delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase; Proline dehydrogenase; putative delta-1-pyrroline-5-carboxylate dehydrogenase 2174726 5166905 Gura_1871 Geobacter uraniireducens Rf4 putative delta-1-pyrroline-5-carboxylate dehydrogenase YP_001230634.1 2171718 D 351605 CDS YP_001230635.1 148263929 5166906 2174913..2175449 1 NC_009483.1 PFAM: protein of unknown function DUF177; hypothetical protein 2175449 5166906 Gura_1872 Geobacter uraniireducens Rf4 hypothetical protein YP_001230635.1 2174913 D 351605 CDS YP_001230636.1 148263930 5166907 2175466..2175648 1 NC_009483.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 2175648 rpmF 5166907 rpmF Geobacter uraniireducens Rf4 50S ribosomal protein L32 YP_001230636.1 2175466 D 351605 CDS YP_001230637.1 148263931 5163171 2175700..2176740 1 NC_009483.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 2176740 5163171 Gura_1874 Geobacter uraniireducens Rf4 putative glycerol-3-phosphate acyltransferase PlsX YP_001230637.1 2175700 D 351605 CDS YP_001230638.1 148263932 5163172 2176755..2177735 1 NC_009483.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 2177735 5163172 Gura_1875 Geobacter uraniireducens Rf4 3-oxoacyl-(acyl-carrier-protein) synthase III YP_001230638.1 2176755 D 351605 CDS YP_001230639.1 148263933 5163173 2177758..2178693 1 NC_009483.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; malonyl CoA-acyl carrier protein transacylase 2178693 5163173 Gura_1876 Geobacter uraniireducens Rf4 malonyl CoA-acyl carrier protein transacylase YP_001230639.1 2177758 D 351605 CDS YP_001230640.1 148263934 5164294 2178690..2179430 1 NC_009483.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; 3-oxoacyl-(acyl-carrier-protein) reductase 2179430 5164294 Gura_1877 Geobacter uraniireducens Rf4 3-oxoacyl-(acyl-carrier-protein) reductase YP_001230640.1 2178690 D 351605 CDS YP_001230641.1 148263935 5164295 2179575..2179808 1 NC_009483.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 2179808 acpP 5164295 acpP Geobacter uraniireducens Rf4 acyl carrier protein YP_001230641.1 2179575 D 351605 CDS YP_001230642.1 148263936 5164296 2179896..2181128 1 NC_009483.1 PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase 2181128 5164296 Gura_1879 Geobacter uraniireducens Rf4 beta-ketoacyl synthase YP_001230642.1 2179896 D 351605 CDS YP_001230643.1 148263937 5164653 2181146..2181595 1 NC_009483.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; RpiB/LacA/LacB family sugar-phosphate isomerase 2181595 5164653 Gura_1880 Geobacter uraniireducens Rf4 RpiB/LacA/LacB family sugar-phosphate isomerase YP_001230643.1 2181146 D 351605 CDS YP_001230644.1 148263938 5164654 2181693..2182940 1 NC_009483.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 2182940 glyA 5164654 glyA Geobacter uraniireducens Rf4 serine hydroxymethyltransferase YP_001230644.1 2181693 D 351605 CDS YP_001230645.1 148263939 5164655 complement(2183019..2183471) 1 NC_009483.1 hypothetical protein 2183471 5164655 Gura_1882 Geobacter uraniireducens Rf4 hypothetical protein YP_001230645.1 2183019 R 351605 CDS YP_001230646.1 148263940 5164874 complement(2183503..2184099) 1 NC_009483.1 hypothetical protein 2184099 5164874 Gura_1883 Geobacter uraniireducens Rf4 hypothetical protein YP_001230646.1 2183503 R 351605 CDS YP_001230647.1 148263941 5164875 2184469..2185644 1 NC_009483.1 hypothetical protein 2185644 5164875 Gura_1884 Geobacter uraniireducens Rf4 hypothetical protein YP_001230647.1 2184469 D 351605 CDS YP_001230648.1 148263942 5164876 2185657..2188050 1 NC_009483.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 2188050 5164876 Gura_1885 Geobacter uraniireducens Rf4 DNA internalization-related competence protein ComEC/Rec2 YP_001230648.1 2185657 D 351605 CDS YP_001230649.1 148263943 5165162 2188167..2189555 1 NC_009483.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; diguanylate cyclase 2189555 5165162 Gura_1886 Geobacter uraniireducens Rf4 diguanylate cyclase YP_001230649.1 2188167 D 351605 CDS YP_001230650.1 148263944 5165163 2189589..2190836 1 NC_009483.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 2190836 hisS 5165163 hisS Geobacter uraniireducens Rf4 histidyl-tRNA synthetase YP_001230650.1 2189589 D 351605 CDS YP_001230651.1 148263945 5165164 2190934..2191875 1 NC_009483.1 PFAM: protein of unknown function DUF610, YibQ; hypothetical protein 2191875 5165164 Gura_1888 Geobacter uraniireducens Rf4 hypothetical protein YP_001230651.1 2190934 D 351605 CDS YP_001230652.1 148263946 5165356 complement(2191945..2193345) 1 NC_009483.1 chromosome partitioning ATPase 2193345 5165356 Gura_1889 Geobacter uraniireducens Rf4 chromosome partitioning ATPase YP_001230652.1 2191945 R 351605 CDS YP_001230653.1 148263947 5165357 2193436..2194776 1 NC_009483.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 2194776 xseA 5165357 xseA Geobacter uraniireducens Rf4 exodeoxyribonuclease VII large subunit YP_001230653.1 2193436 D 351605 CDS YP_001230654.1 148263948 5165358 complement(2194799..2195482) 1 NC_009483.1 PFAM: Haloacid dehalogenase domain protein hydrolase; hydrolase 2195482 5165358 Gura_1891 Geobacter uraniireducens Rf4 hydrolase YP_001230654.1 2194799 R 351605 CDS YP_001230655.1 148263949 5165512 complement(2195535..2196917) 1 NC_009483.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 2196917 5165512 Gura_1892 Geobacter uraniireducens Rf4 threonine synthase YP_001230655.1 2195535 R 351605 CDS YP_001230656.1 148263950 5165513 complement(2197034..2197966) 1 NC_009483.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein 2197966 5165513 Gura_1893 Geobacter uraniireducens Rf4 TPR repeat-containing protein YP_001230656.1 2197034 R 351605 CDS YP_001230657.1 148263951 5165514 complement(2197959..2198933) 1 NC_009483.1 PFAM: Mammalian cell entry related domain protein; hypothetical protein 2198933 5165514 Gura_1894 Geobacter uraniireducens Rf4 hypothetical protein YP_001230657.1 2197959 R 351605 CDS YP_001230658.1 148263952 5165522 complement(2198930..2199589) 1 NC_009483.1 organic solvents resistance ABC transporter ATPase-like protein 2199589 5165522 Gura_1895 Geobacter uraniireducens Rf4 organic solvents resistance ABC transporter ATPase-like protein YP_001230658.1 2198930 R 351605 CDS YP_001230659.1 148263953 5165523 complement(2199636..2200412) 1 NC_009483.1 PFAM: protein of unknown function DUF140; hypothetical protein 2200412 5165523 Gura_1896 Geobacter uraniireducens Rf4 hypothetical protein YP_001230659.1 2199636 R 351605 CDS YP_001230660.1 148263954 5165524 complement(2200428..2201186) 1 NC_009483.1 PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 2201186 5165524 Gura_1897 Geobacter uraniireducens Rf4 beta-lactamase domain-containing protein YP_001230660.1 2200428 R 351605 CDS YP_001230661.1 148263955 5163678 2201452..2201931 1 NC_009483.1 PFAM: protein of unknown function DUF150; hypothetical protein 2201931 5163678 Gura_1898 Geobacter uraniireducens Rf4 hypothetical protein YP_001230661.1 2201452 D 351605 CDS YP_001230662.1 148263956 5163679 2201986..2203137 1 NC_009483.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 2203137 nusA 5163679 nusA Geobacter uraniireducens Rf4 transcription elongation factor NusA YP_001230662.1 2201986 D 351605 CDS YP_001230663.1 148263957 5163680 2203140..2203733 1 NC_009483.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; protein of unknown function DUF448; hypothetical protein 2203733 5163680 Gura_1900 Geobacter uraniireducens Rf4 hypothetical protein YP_001230663.1 2203140 D 351605 CDS YP_001230664.1 148263958 5164824 2203734..2206382 1 NC_009483.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 2206382 infB 5164824 infB Geobacter uraniireducens Rf4 translation initiation factor IF-2 YP_001230664.1 2203734 D 351605 CDS YP_001230665.1 148263959 5164825 2206437..2206805 1 NC_009483.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 2206805 5164825 Gura_1902 Geobacter uraniireducens Rf4 ribosome-binding factor A YP_001230665.1 2206437 D 351605 CDS YP_001230666.1 148263960 5164826 2206786..2207736 1 NC_009483.1 PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; phosphoesterase domain-containing protein 2207736 5164826 Gura_1903 Geobacter uraniireducens Rf4 phosphoesterase domain-containing protein YP_001230666.1 2206786 D 351605 CDS YP_001230667.1 148263961 5167022 2207740..2208672 1 NC_009483.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B 2208672 5167022 Gura_1904 Geobacter uraniireducens Rf4 tRNA pseudouridine synthase B YP_001230667.1 2207740 D 351605 CDS YP_001230668.1 148263962 5167023 2208771..2209037 1 NC_009483.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 2209037 rpsO 5167023 rpsO Geobacter uraniireducens Rf4 30S ribosomal protein S15 YP_001230668.1 2208771 D 351605 CDS YP_001230669.1 148263963 5167024 2209282..2211372 1 NC_009483.1 PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 2211372 5167024 Gura_1906 Geobacter uraniireducens Rf4 polynucleotide phosphorylase/polyadenylase YP_001230669.1 2209282 D 351605 CDS YP_001230670.1 148263964 5165350 2211411..2212670 1 NC_009483.1 PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein 2212670 5165350 Gura_1907 Geobacter uraniireducens Rf4 peptidase M16 domain-containing protein YP_001230670.1 2211411 D 351605 CDS YP_001230671.1 148263965 5165351 2212642..2213133 1 NC_009483.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 2213133 dut 5165351 dut Geobacter uraniireducens Rf4 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_001230671.1 2212642 D 351605 CDS YP_001230672.1 148263966 5165352 2213158..2214264 1 NC_009483.1 PFAM: peptidase M29, aminopeptidase II; peptidase M29, aminopeptidase II 2214264 5165352 Gura_1909 Geobacter uraniireducens Rf4 peptidase M29, aminopeptidase II YP_001230672.1 2213158 D 351605 CDS YP_001230673.1 148263967 5166188 2214264..2214872 1 NC_009483.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain; Sua5/YciO/YrdC/YwlC family protein 2214872 5166188 Gura_1910 Geobacter uraniireducens Rf4 Sua5/YciO/YrdC/YwlC family protein YP_001230673.1 2214264 D 351605 CDS YP_001230674.1 148263968 5166189 2214887..2215240 1 NC_009483.1 hypothetical protein 2215240 5166189 Gura_1911 Geobacter uraniireducens Rf4 hypothetical protein YP_001230674.1 2214887 D 351605 CDS YP_001230675.1 148263969 5166190 complement(2215332..2216180) 1 NC_009483.1 PFAM: Patatin; patatin 2216180 5166190 Gura_1912 Geobacter uraniireducens Rf4 patatin YP_001230675.1 2215332 R 351605 CDS YP_001230676.1 148263970 5162610 2216249..2216713 1 NC_009483.1 hypothetical protein 2216713 5162610 Gura_1913 Geobacter uraniireducens Rf4 hypothetical protein YP_001230676.1 2216249 D 351605 CDS YP_001230677.1 148263971 5162611 2217011..2218312 1 NC_009483.1 TIGRFAM: trigger factor; PFAM: peptidylprolyl isomerase, FKBP-type; trigger factor, C-terminal domain protein; trigger factor, N-terminal domain; trigger factor 2218312 5162611 Gura_1914 Geobacter uraniireducens Rf4 trigger factor YP_001230677.1 2217011 D 351605 CDS YP_001230678.1 148263972 5162612 2218343..2218942 1 NC_009483.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2218942 clpP 5162612 clpP Geobacter uraniireducens Rf4 ATP-dependent Clp protease proteolytic subunit YP_001230678.1 2218343 D 351605 CDS YP_001230679.1 148263973 5162849 2218939..2220192 1 NC_009483.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2220192 clpX 5162849 clpX Geobacter uraniireducens Rf4 ATP-dependent protease ATP-binding subunit ClpX YP_001230679.1 2218939 D 351605 CDS YP_001230680.1 148263974 5162850 2220209..2222635 1 NC_009483.1 TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La 2222635 5162850 Gura_1917 Geobacter uraniireducens Rf4 ATP-dependent protease La YP_001230680.1 2220209 D 351605 CDS YP_001230681.1 148263975 5162851 2222740..2223015 1 NC_009483.1 PFAM: histone family protein DNA-binding protein; histone family protein DNA-binding protein 2223015 5162851 Gura_1918 Geobacter uraniireducens Rf4 histone family protein DNA-binding protein YP_001230681.1 2222740 D 351605 CDS YP_001230682.1 148263976 5165442 2223687..2224412 1 NC_009483.1 PFAM: glycosyl transferase, family 2; dolichyl-phosphate beta-D-mannosyltransferase 2224412 5165442 Gura_1919 Geobacter uraniireducens Rf4 dolichyl-phosphate beta-D-mannosyltransferase YP_001230682.1 2223687 D 351605 CDS YP_001230683.1 148263977 5165515 2224614..2225645 1 NC_009483.1 PFAM: NHL repeat containing protein; NHL repeat-containing protein 2225645 5165515 Gura_1920 Geobacter uraniireducens Rf4 NHL repeat-containing protein YP_001230683.1 2224614 D 351605 CDS YP_001230684.1 148263978 5166223 2225642..2226391 1 NC_009483.1 hypothetical protein 2226391 5166223 Gura_1921 Geobacter uraniireducens Rf4 hypothetical protein YP_001230684.1 2225642 D 351605 CDS YP_001230685.1 148263979 5166224 2226405..2227502 1 NC_009483.1 hypothetical protein 2227502 5166224 Gura_1922 Geobacter uraniireducens Rf4 hypothetical protein YP_001230685.1 2226405 D 351605 CDS YP_001230686.1 148263980 5166225 2227646..2228854 1 NC_009483.1 PFAM: type II secretion system protein; type II secretion system protein 2228854 5166225 Gura_1923 Geobacter uraniireducens Rf4 type II secretion system protein YP_001230686.1 2227646 D 351605 CDS YP_001230687.1 148263981 5166696 2228855..2230585 1 NC_009483.1 PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; type II secretion system protein E 2230585 5166696 Gura_1924 Geobacter uraniireducens Rf4 type II secretion system protein E YP_001230687.1 2228855 D 351605 CDS YP_001230688.1 148263982 5166697 2230717..2231643 1 NC_009483.1 Tfp pilus assembly protein ATPase PilM-like protein 2231643 5166697 Gura_1925 Geobacter uraniireducens Rf4 Tfp pilus assembly protein ATPase PilM-like protein YP_001230688.1 2230717 D 351605 CDS YP_001230689.1 148263983 5166698 2231643..2232182 1 NC_009483.1 PFAM: Fimbrial assembly family protein; fimbrial assembly family protein 2232182 5166698 Gura_1926 Geobacter uraniireducens Rf4 fimbrial assembly family protein YP_001230689.1 2231643 D 351605 CDS YP_001230690.1 148263984 5165136 2232179..2232733 1 NC_009483.1 hypothetical protein 2232733 5165136 Gura_1927 Geobacter uraniireducens Rf4 hypothetical protein YP_001230690.1 2232179 D 351605 CDS YP_001230691.1 148263985 5165137 2232730..2233359 1 NC_009483.1 hypothetical protein 2233359 5165137 Gura_1928 Geobacter uraniireducens Rf4 hypothetical protein YP_001230691.1 2232730 D 351605 CDS YP_001230692.1 148263986 5165138 2233390..2235780 1 NC_009483.1 PFAM: TPR repeat-containing protein; cellulosome anchoring protein, cohesin region; type II and III secretion system protein; NolW domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; type II and III secretion system protein 2235780 5165138 Gura_1929 Geobacter uraniireducens Rf4 type II and III secretion system protein YP_001230692.1 2233390 D 351605 CDS YP_001230693.1 148263987 5164972 2235803..2236297 1 NC_009483.1 hypothetical protein 2236297 5164972 Gura_1930 Geobacter uraniireducens Rf4 hypothetical protein YP_001230693.1 2235803 D 351605 CDS YP_001230694.1 148263988 5164973 2236349..2236765 1 NC_009483.1 PFAM: type II secretion system protein G; type II secretion system protein G 2236765 5164973 Gura_1931 Geobacter uraniireducens Rf4 type II secretion system protein G YP_001230694.1 2236349 D 351605 CDS YP_001230695.1 148263989 5164974 2236849..2237520 1 NC_009483.1 TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; cell division ATP-binding protein FtsE 2237520 5164974 Gura_1932 Geobacter uraniireducens Rf4 cell division ATP-binding protein FtsE YP_001230695.1 2236849 D 351605 CDS YP_001230696.1 148263990 5164626 2237507..2238451 1 NC_009483.1 PFAM: protein of unknown function DUF214; hypothetical protein 2238451 5164626 Gura_1933 Geobacter uraniireducens Rf4 hypothetical protein YP_001230696.1 2237507 D 351605 CDS YP_001230697.1 148263991 5164627 2238454..2239644 1 NC_009483.1 PFAM: peptidase M23B; peptidase M23B 2239644 5164627 Gura_1934 Geobacter uraniireducens Rf4 peptidase M23B YP_001230697.1 2238454 D 351605 CDS YP_001230698.1 148263992 5164628 2239713..2241047 1 NC_009483.1 TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 2241047 5164628 Gura_1935 Geobacter uraniireducens Rf4 carboxyl-terminal protease YP_001230698.1 2239713 D 351605 CDS YP_001230699.1 148263993 5166474 2241268..2241900 1 NC_009483.1 SARP family transcriptional regulator 2241900 5166474 Gura_1936 Geobacter uraniireducens Rf4 SARP family transcriptional regulator YP_001230699.1 2241268 D 351605 CDS YP_001230700.1 148263994 5166475 2242127..2243713 1 NC_009483.1 PFAM: Ig domain protein, group 1 domain protein; Ig domain-containing protein 2243713 5166475 Gura_1937 Geobacter uraniireducens Rf4 Ig domain-containing protein YP_001230700.1 2242127 D 351605 CDS YP_001230701.1 148263995 5166476 2243790..2245136 1 NC_009483.1 hypothetical protein 2245136 5166476 Gura_1938 Geobacter uraniireducens Rf4 hypothetical protein YP_001230701.1 2243790 D 351605 CDS YP_001230702.1 148263996 5164963 2245535..2248066 1 NC_009483.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 2248066 5164963 Gura_1939 Geobacter uraniireducens Rf4 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_001230702.1 2245535 D 351605 CDS YP_001230703.1 148263997 5164964 complement(2248313..2248957) 1 NC_009483.1 hypothetical protein 2248957 5164964 Gura_1940 Geobacter uraniireducens Rf4 hypothetical protein YP_001230703.1 2248313 R 351605 CDS YP_001230704.1 148263998 5164965 2249396..2250469 1 NC_009483.1 PFAM: GAF domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 2250469 5164965 Gura_1941 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001230704.1 2249396 D 351605 CDS YP_001230705.1 148263999 5164614 2250551..2250883 1 NC_009483.1 TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis, HypA; hydrogenase nickel incorporation protein HypA 2250883 5164614 Gura_1942 Geobacter uraniireducens Rf4 hydrogenase nickel incorporation protein HypA YP_001230705.1 2250551 D 351605 CDS YP_001230706.1 148264000 5164615 2251128..2252264 1 NC_009483.1 TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein; hydrogenase (NiFe) small subunit HydA 2252264 5164615 Gura_1943 Geobacter uraniireducens Rf4 hydrogenase (NiFe) small subunit HydA YP_001230706.1 2251128 D 351605 CDS YP_001230707.1 148264001 5164616 2252248..2253183 1 NC_009483.1 Fe-S ferrodoxin type component; participates in the periplasmic electron-transferring activity of hydrogenase 2; hydrogenase 2 protein HybA 2253183 5164616 Gura_1944 Geobacter uraniireducens Rf4 hydrogenase 2 protein HybA YP_001230707.1 2252248 D 351605 CDS YP_001230708.1 148264002 5165908 2253183..2254499 1 NC_009483.1 HybB; cytochrome b subunit of the hydrogenase 2 enzyme, composed of HybA, B, C, and O subunits; putative hydrogenase 2 b cytochrome subunit 2254499 5165908 Gura_1945 Geobacter uraniireducens Rf4 putative hydrogenase 2 b cytochrome subunit YP_001230708.1 2253183 D 351605 CDS YP_001230709.1 148264003 5165909 2254748..2256430 1 NC_009483.1 PFAM: nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase, large subunit 2256430 5165909 Gura_1946 Geobacter uraniireducens Rf4 nickel-dependent hydrogenase, large subunit YP_001230709.1 2254748 D 351605 CDS YP_001230710.1 148264004 5165910 2256586..2257086 1 NC_009483.1 TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52, hydrogen uptake protein; hydrogenase maturation protease 2257086 5165910 Gura_1947 Geobacter uraniireducens Rf4 hydrogenase maturation protease YP_001230710.1 2256586 D 351605 CDS YP_001230711.1 148264005 5164184 2257098..2257265 1 NC_009483.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; twin arginine-targeting protein translocase 2257265 5164184 Gura_1948 Geobacter uraniireducens Rf4 twin arginine-targeting protein translocase YP_001230711.1 2257098 D 351605 CDS YP_001230712.1 148264006 5164185 2257500..2258261 1 NC_009483.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; hydrogenase nickel incorporation protein HypB 2258261 5164185 Gura_1949 Geobacter uraniireducens Rf4 hydrogenase nickel incorporation protein HypB YP_001230712.1 2257500 D 351605 CDS YP_001230713.1 148264007 5164186 2258265..2260535 1 NC_009483.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; (NiFe) hydrogenase maturation protein HypF 2260535 5164186 Gura_1950 Geobacter uraniireducens Rf4 (NiFe) hydrogenase maturation protein HypF YP_001230713.1 2258265 D 351605 CDS YP_001230714.1 148264008 5163567 2260535..2260765 1 NC_009483.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); hydrogenase assembly chaperone HypC/HupF 2260765 5163567 Gura_1951 Geobacter uraniireducens Rf4 hydrogenase assembly chaperone HypC/HupF YP_001230714.1 2260535 D 351605 CDS YP_001230715.1 148264009 5163568 2261101..2262192 1 NC_009483.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; hydrogenase expression/formation protein HypD 2262192 5163568 Gura_1952 Geobacter uraniireducens Rf4 hydrogenase expression/formation protein HypD YP_001230715.1 2261101 D 351605 CDS YP_001230716.1 148264010 5163569 2262586..2263596 1 NC_009483.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; hydrogenase expression/formation protein HypE 2263596 5163569 Gura_1953 Geobacter uraniireducens Rf4 hydrogenase expression/formation protein HypE YP_001230716.1 2262586 D 351605 CDS YP_001230717.1 148264011 5163943 complement(2263632..2263913) 1 NC_009483.1 PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ 2263913 5163943 Gura_1954 Geobacter uraniireducens Rf4 type IV pilus assembly PilZ YP_001230717.1 2263632 R 351605 CDS YP_001230718.1 148264012 5163944 complement(2264081..2264476) 1 NC_009483.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2264476 5163944 Gura_1955 Geobacter uraniireducens Rf4 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001230718.1 2264081 R 351605 CDS YP_001230719.1 148264013 5163945 complement(2264541..2264891) 1 NC_009483.1 hypothetical protein 2264891 5163945 Gura_1956 Geobacter uraniireducens Rf4 hypothetical protein YP_001230719.1 2264541 R 351605 CDS YP_001230720.1 148264014 5163964 2265364..2266647 1 NC_009483.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 2266647 5163964 Gura_1957 Geobacter uraniireducens Rf4 4-aminobutyrate aminotransferase YP_001230720.1 2265364 D 351605 CDS YP_001230721.1 148264015 5163965 2266647..2267981 1 NC_009483.1 GTPase-like protein 2267981 5163965 Gura_1958 Geobacter uraniireducens Rf4 GTPase-like protein YP_001230721.1 2266647 D 351605 CDS YP_001230722.1 148264016 5163966 2268182..2269663 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 2269663 5163966 Gura_1959 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001230722.1 2268182 D 351605 CDS YP_001230723.1 148264017 5165664 complement(2269876..2271453) 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 2271453 5165664 Gura_1960 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001230723.1 2269876 R 351605 CDS YP_001230724.1 148264018 5165665 complement(2271655..2272977) 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 2272977 5165665 Gura_1961 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001230724.1 2271655 R 351605 CDS YP_001230725.1 148264019 5165666 complement(2273586..2274896) 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 2274896 5165666 Gura_1962 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001230725.1 2273586 R 351605 CDS YP_001230726.1 148264020 5164020 2275311..2276792 1 NC_009483.1 PFAM: polysaccharide biosynthesis protein; colanic acid exporter 2276792 5164020 Gura_1963 Geobacter uraniireducens Rf4 colanic acid exporter YP_001230726.1 2275311 D 351605 CDS YP_001230727.1 148264021 5164021 2277161..2279017 1 NC_009483.1 PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, plug 2279017 5164021 Gura_1964 Geobacter uraniireducens Rf4 TonB-dependent receptor, plug YP_001230727.1 2277161 D 351605 CDS YP_001230728.1 148264022 5164022 2279005..2279901 1 NC_009483.1 ABC transporter periplasmic component-like protein 2279901 5164022 Gura_1965 Geobacter uraniireducens Rf4 ABC transporter periplasmic component-like protein YP_001230728.1 2279005 D 351605 CDS YP_001230729.1 148264023 5165142 2280238..2280831 1 NC_009483.1 dual specificity protein phosphatase 2280831 5165142 Gura_1966 Geobacter uraniireducens Rf4 dual specificity protein phosphatase YP_001230729.1 2280238 D 351605 CDS YP_001230730.1 148264024 5165143 2280851..2281267 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 2281267 5165143 Gura_1967 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001230730.1 2280851 D 351605 CDS YP_001230731.1 148264025 5165144 2281301..2281579 1 NC_009483.1 hypothetical protein 2281579 5165144 Gura_1968 Geobacter uraniireducens Rf4 hypothetical protein YP_001230731.1 2281301 D 351605 CDS YP_001230732.1 148264026 5165449 2281569..2281745 1 NC_009483.1 hypothetical protein 2281745 5165449 Gura_1969 Geobacter uraniireducens Rf4 hypothetical protein YP_001230732.1 2281569 D 351605 CDS YP_001230733.1 148264027 5165450 2281923..2282168 1 NC_009483.1 hypothetical protein 2282168 5165450 Gura_1970 Geobacter uraniireducens Rf4 hypothetical protein YP_001230733.1 2281923 D 351605 CDS YP_001230734.1 148264028 5165451 2282165..2282509 1 NC_009483.1 PFAM: PemK family protein; transcriptional modulator of MazE/toxin MazF 2282509 5165451 Gura_1971 Geobacter uraniireducens Rf4 transcriptional modulator of MazE/toxin MazF YP_001230734.1 2282165 D 351605 CDS YP_001230735.1 148264029 5166893 2282710..2283498 1 NC_009483.1 PFAM: ADP-ribosylation/Crystallin J1; ADP-ribosylation/crystallin J1 2283498 5166893 Gura_1972 Geobacter uraniireducens Rf4 ADP-ribosylation/crystallin J1 YP_001230735.1 2282710 D 351605 CDS YP_001230736.1 148264030 5166894 complement(2283587..2284102) 1 NC_009483.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2284102 5166894 Gura_1973 Geobacter uraniireducens Rf4 N-acetyltransferase GCN5 YP_001230736.1 2283587 R 351605 CDS YP_001230737.1 148264031 5166895 2284443..2285759 1 NC_009483.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase 2285759 5166895 Gura_1974 Geobacter uraniireducens Rf4 DEAD/DEAH box helicase YP_001230737.1 2284443 D 351605 CDS YP_001230738.1 148264032 5165159 2285899..2286309 1 NC_009483.1 hypothetical protein 2286309 5165159 Gura_1975 Geobacter uraniireducens Rf4 hypothetical protein YP_001230738.1 2285899 D 351605 CDS YP_001230739.1 148264033 5165160 2286466..2287509 1 NC_009483.1 PFAM: peptidase M20; peptidase M28; peptidase M28 2287509 5165160 Gura_1976 Geobacter uraniireducens Rf4 peptidase M28 YP_001230739.1 2286466 D 351605 CDS YP_001230740.1 148264034 5165161 complement(2287513..2289105) 1 NC_009483.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 2289105 5165161 Gura_1977 Geobacter uraniireducens Rf4 apolipoprotein N-acyltransferase YP_001230740.1 2287513 R 351605 CDS YP_001230741.1 148264035 5166995 complement(2289159..2289884) 1 NC_009483.1 PFAM: transport-associated protein; transport-associated protein 2289884 5166995 Gura_1978 Geobacter uraniireducens Rf4 transport-associated protein YP_001230741.1 2289159 R 351605 CDS YP_001230742.1 148264036 5166996 2290587..2291816 1 NC_009483.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; nuclease SbcCD subunit D 2291816 5166996 Gura_1979 Geobacter uraniireducens Rf4 nuclease SbcCD subunit D YP_001230742.1 2290587 D 351605 CDS YP_001230743.1 148264037 5166997 2291813..2295496 1 NC_009483.1 PFAM: SMC domain protein; SMC domain-containing protein 2295496 5166997 Gura_1980 Geobacter uraniireducens Rf4 SMC domain-containing protein YP_001230743.1 2291813 D 351605 CDS YP_001230744.1 148264038 5166655 2295493..2296302 1 NC_009483.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 2296302 5166655 Gura_1981 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001230744.1 2295493 D 351605 CDS YP_001230745.1 148264039 5166656 2296320..2296898 1 NC_009483.1 aspartyl protease-like protein 2296898 5166656 Gura_1982 Geobacter uraniireducens Rf4 aspartyl protease-like protein YP_001230745.1 2296320 D 351605 CDS YP_001230746.1 148264040 5166657 2297147..2297449 1 NC_009483.1 hypothetical protein 2297449 5166657 Gura_1983 Geobacter uraniireducens Rf4 hypothetical protein YP_001230746.1 2297147 D 351605 CDS YP_001230747.1 148264041 5166531 complement(2297529..2297975) 1 NC_009483.1 hypothetical protein 2297975 5166531 Gura_1984 Geobacter uraniireducens Rf4 hypothetical protein YP_001230747.1 2297529 R 351605 CDS YP_001230748.1 148264042 5166532 2298117..2299790 1 NC_009483.1 PFAM: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 2299790 5166532 Gura_1985 Geobacter uraniireducens Rf4 Sel1 domain-containing protein YP_001230748.1 2298117 D 351605 CDS YP_001230749.1 148264043 5166533 2300340..2301011 1 NC_009483.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; two component heavy metal response transcriptional regulator 2301011 5166533 Gura_1986 Geobacter uraniireducens Rf4 two component heavy metal response transcriptional regulator YP_001230749.1 2300340 D 351605 CDS YP_001230750.1 148264044 5166649 2300992..2302461 1 NC_009483.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; heavy metal sensor signal transduction histidine kinase 2302461 5166649 Gura_1987 Geobacter uraniireducens Rf4 heavy metal sensor signal transduction histidine kinase YP_001230750.1 2300992 D 351605 CDS YP_001230751.1 148264045 5166650 2302730..2303698 1 NC_009483.1 hypothetical protein 2303698 5166650 Gura_1988 Geobacter uraniireducens Rf4 hypothetical protein YP_001230751.1 2302730 D 351605 CDS YP_001230752.1 148264046 5166651 2303878..2305134 1 NC_009483.1 hypothetical protein 2305134 5166651 Gura_1989 Geobacter uraniireducens Rf4 hypothetical protein YP_001230752.1 2303878 D 351605 CDS YP_001230753.1 148264047 5166727 2305379..2306791 1 NC_009483.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; YVTN beta-propeller repeat-containing protein 2306791 5166727 Gura_1990 Geobacter uraniireducens Rf4 YVTN beta-propeller repeat-containing protein YP_001230753.1 2305379 D 351605 CDS YP_001230754.1 148264048 5166728 2306856..2309036 1 NC_009483.1 hypothetical protein 2309036 5166728 Gura_1991 Geobacter uraniireducens Rf4 hypothetical protein YP_001230754.1 2306856 D 351605 CDS YP_001230755.1 148264049 5166729 2309068..2309658 1 NC_009483.1 hypothetical protein 2309658 5166729 Gura_1992 Geobacter uraniireducens Rf4 hypothetical protein YP_001230755.1 2309068 D 351605 CDS YP_001230756.1 148264050 5163081 2309630..2310754 1 NC_009483.1 hypothetical protein 2310754 5163081 Gura_1993 Geobacter uraniireducens Rf4 hypothetical protein YP_001230756.1 2309630 D 351605 CDS YP_001230757.1 148264051 5163082 2310815..2312572 1 NC_009483.1 hypothetical protein 2312572 5163082 Gura_1994 Geobacter uraniireducens Rf4 hypothetical protein YP_001230757.1 2310815 D 351605 CDS YP_001230758.1 148264052 5163083 2312646..2314622 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 2314622 5163083 Gura_1995 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001230758.1 2312646 D 351605 CDS YP_001230759.1 148264053 5166950 2314636..2315919 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 2315919 5166950 Gura_1996 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001230759.1 2314636 D 351605 CDS YP_001230760.1 148264054 5166951 2315924..2316835 1 NC_009483.1 PFAM: NHL repeat containing protein; NHL repeat-containing protein 2316835 5166951 Gura_1997 Geobacter uraniireducens Rf4 NHL repeat-containing protein YP_001230760.1 2315924 D 351605 CDS YP_001230761.1 148264055 5166952 2316872..2317390 1 NC_009483.1 PFAM: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 2317390 5166952 Gura_1998 Geobacter uraniireducens Rf4 Sel1 domain-containing protein YP_001230761.1 2316872 D 351605 CDS YP_001230762.1 148264056 5166525 2317422..2317748 1 NC_009483.1 hypothetical protein 2317748 5166525 Gura_1999 Geobacter uraniireducens Rf4 hypothetical protein YP_001230762.1 2317422 D 351605 CDS YP_001230763.1 148264057 5166526 complement(2318026..2319120) 1 NC_009483.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; response regulator receiver sensor signal transduction histidine kinase 2319120 5166526 Gura_2000 Geobacter uraniireducens Rf4 response regulator receiver sensor signal transduction histidine kinase YP_001230763.1 2318026 R 351605 CDS YP_001230764.1 148264058 5166527 2319562..2320161 1 NC_009483.1 PFAM: carbonic anhydrase; carbonate dehydratase 2320161 5166527 Gura_2001 Geobacter uraniireducens Rf4 carbonate dehydratase YP_001230764.1 2319562 D 351605 CDS YP_001230765.1 148264059 5166980 2320221..2320526 1 NC_009483.1 hypothetical protein 2320526 5166980 Gura_2002 Geobacter uraniireducens Rf4 hypothetical protein YP_001230765.1 2320221 D 351605 CDS YP_001230766.1 148264060 5166981 2320520..2320876 1 NC_009483.1 PFAM: PemK family protein; transcriptional modulator of MazE/toxin MazF 2320876 5166981 Gura_2003 Geobacter uraniireducens Rf4 transcriptional modulator of MazE/toxin MazF YP_001230766.1 2320520 D 351605 CDS YP_001230767.1 148264061 5166982 2321079..2322305 1 NC_009483.1 hypothetical protein 2322305 5166982 Gura_2004 Geobacter uraniireducens Rf4 hypothetical protein YP_001230767.1 2321079 D 351605 CDS YP_001230768.1 148264062 5166471 2322491..2324065 1 NC_009483.1 hypothetical protein 2324065 5166471 Gura_2005 Geobacter uraniireducens Rf4 hypothetical protein YP_001230768.1 2322491 D 351605 CDS YP_001230769.1 148264063 5166472 complement(2324067..2324771) 1 NC_009483.1 PFAM: 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 2324771 5166472 Gura_2006 Geobacter uraniireducens Rf4 4'-phosphopantetheinyl transferase YP_001230769.1 2324067 R 351605 CDS YP_001230770.1 148264064 5166473 complement(2324783..2325778) 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; 3-beta hydroxysteroid dehydrogenase/isomerase 2325778 5166473 Gura_2007 Geobacter uraniireducens Rf4 3-beta hydroxysteroid dehydrogenase/isomerase YP_001230770.1 2324783 R 351605 CDS YP_001230771.1 148264065 5166646 complement(2325775..2327412) 1 NC_009483.1 Catalyzes the specific recognition and activation of amino acids during peptide synthesis; peptide synthase 2327412 5166646 Gura_2008 Geobacter uraniireducens Rf4 peptide synthase YP_001230771.1 2325775 R 351605 CDS YP_001230772.1 148264066 5166647 complement(2327434..2328318) 1 NC_009483.1 PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2328318 5166647 Gura_2009 Geobacter uraniireducens Rf4 alpha/beta hydrolase fold protein YP_001230772.1 2327434 R 351605 CDS YP_001230773.1 148264067 5166648 complement(2328557..2329600) 1 NC_009483.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 2329600 5166648 Gura_2010 Geobacter uraniireducens Rf4 3-oxoacyl-ACP synthase YP_001230773.1 2328557 R 351605 CDS YP_001230774.1 148264068 5164638 complement(2329921..2336967) 1 NC_009483.1 PFAM: beta-ketoacyl synthase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ 2336967 5164638 Gura_2011 Geobacter uraniireducens Rf4 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ YP_001230774.1 2329921 R 351605 CDS YP_001230775.1 148264069 5164639 complement(2336970..2343866) 1 NC_009483.1 PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; KR; erythronolide synthase 2343866 5164639 Gura_2012 Geobacter uraniireducens Rf4 erythronolide synthase YP_001230775.1 2336970 R 351605 CDS YP_001230776.1 148264070 5164640 complement(2343863..2345527) 1 NC_009483.1 PFAM: 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 2345527 5164640 Gura_2013 Geobacter uraniireducens Rf4 2-nitropropane dioxygenase YP_001230776.1 2343863 R 351605 CDS YP_001230777.1 148264071 5162861 2346224..2348938 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 2348938 5162861 Gura_2014 Geobacter uraniireducens Rf4 PAS/PAC sensor signal transduction histidine kinase YP_001230777.1 2346224 D 351605 CDS YP_001230778.1 148264072 5162862 complement(2348987..2349424) 1 NC_009483.1 hypothetical protein 2349424 5162862 Gura_2015 Geobacter uraniireducens Rf4 hypothetical protein YP_001230778.1 2348987 R 351605 CDS YP_001230779.1 148264073 5162863 complement(2349620..2350639) 1 NC_009483.1 hypothetical protein 2350639 5162863 Gura_2016 Geobacter uraniireducens Rf4 hypothetical protein YP_001230779.1 2349620 R 351605 CDS YP_001230780.1 148264074 5165464 2351063..2352331 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 2352331 5165464 Gura_2017 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001230780.1 2351063 D 351605 CDS YP_001230781.1 148264075 5165465 2352328..2353671 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 2353671 5165465 Gura_2018 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001230781.1 2352328 D 351605 CDS YP_001230782.1 148264076 5165466 2353853..2354389 1 NC_009483.1 PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; OB-fold tRNA/helicase-type nucleic acid binding protein 2354389 5165466 Gura_2019 Geobacter uraniireducens Rf4 OB-fold tRNA/helicase-type nucleic acid binding protein YP_001230782.1 2353853 D 351605 CDS YP_001230783.1 148264077 5166149 2354445..2355326 1 NC_009483.1 hypothetical protein 2355326 5166149 Gura_2020 Geobacter uraniireducens Rf4 hypothetical protein YP_001230783.1 2354445 D 351605 CDS YP_001230784.1 148264078 5166150 2355564..2356454 1 NC_009483.1 hypothetical protein 2356454 5166150 Gura_2021 Geobacter uraniireducens Rf4 hypothetical protein YP_001230784.1 2355564 D 351605 CDS YP_001230785.1 148264079 5166151 2357088..2359139 1 NC_009483.1 PFAM: Fibronectin, type III domain protein; fibronectin I domain-containing protein 2359139 5166151 Gura_2022 Geobacter uraniireducens Rf4 fibronectin I domain-containing protein YP_001230785.1 2357088 D 351605 CDS YP_001230786.1 148264080 5166094 complement(2359242..2362307) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 2362307 5166094 Gura_2023 Geobacter uraniireducens Rf4 multi-sensor hybrid histidine kinase YP_001230786.1 2359242 R 351605 CDS YP_001230787.1 148264081 5166095 complement(2362538..2363398) 1 NC_009483.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; parB-like partition protein 2363398 5166095 Gura_2024 Geobacter uraniireducens Rf4 parB-like partition protein YP_001230787.1 2362538 R 351605 CDS YP_001230788.1 148264082 5165574 2364628..2365158 1 NC_009483.1 TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 2365158 5165574 Gura_2025 Geobacter uraniireducens Rf4 cob(I)alamin adenosyltransferase YP_001230788.1 2364628 D 351605 CDS YP_001230789.1 148264083 5165575 2365239..2365643 1 NC_009483.1 PFAM: cobalamin B12-binding domain protein; cobalamin B12-binding domain-containing protein 2365643 5165575 Gura_2026 Geobacter uraniireducens Rf4 cobalamin B12-binding domain-containing protein YP_001230789.1 2365239 D 351605 CDS YP_001230790.1 148264084 5165070 2365795..2366745 1 NC_009483.1 TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase; LAO/AO transport system ATPase 2366745 5165070 Gura_2027 Geobacter uraniireducens Rf4 LAO/AO transport system ATPase YP_001230790.1 2365795 D 351605 CDS YP_001230791.1 148264085 5165071 2366839..2367675 1 NC_009483.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 2367675 5165071 Gura_2028 Geobacter uraniireducens Rf4 ErfK/YbiS/YcfS/YnhG family protein YP_001230791.1 2366839 D 351605 CDS YP_001230792.1 148264086 5165072 2367793..2368401 1 NC_009483.1 hypothetical protein 2368401 5165072 Gura_2029 Geobacter uraniireducens Rf4 hypothetical protein YP_001230792.1 2367793 D 351605 CDS YP_001230793.1 148264087 5165362 2368449..2369186 1 NC_009483.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA methyltransferase 2369186 5165362 Gura_2030 Geobacter uraniireducens Rf4 RNA methyltransferase YP_001230793.1 2368449 D 351605 CDS YP_001230794.1 148264088 5165363 2369183..2369461 1 NC_009483.1 hypothetical protein 2369461 5165363 Gura_2031 Geobacter uraniireducens Rf4 hypothetical protein YP_001230794.1 2369183 D 351605 CDS YP_001230795.1 148264089 5165364 2369492..2370076 1 NC_009483.1 PFAM: LemA family protein; LemA family protein 2370076 5165364 Gura_2032 Geobacter uraniireducens Rf4 LemA family protein YP_001230795.1 2369492 D 351605 CDS YP_001230796.1 148264090 5164760 2370145..2371002 1 NC_009483.1 PFAM: protein of unknown function DUF477; hypothetical protein 2371002 5164760 Gura_2033 Geobacter uraniireducens Rf4 hypothetical protein YP_001230796.1 2370145 D 351605 CDS YP_001230797.1 148264091 5164761 2371311..2371946 1 NC_009483.1 PFAM: protein of unknown function DUF477; hypothetical protein 2371946 5164761 Gura_2034 Geobacter uraniireducens Rf4 hypothetical protein YP_001230797.1 2371311 D 351605 CDS YP_001230798.1 148264092 5164762 2372305..2377095 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 2377095 5164762 Gura_2035 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001230798.1 2372305 D 351605 CDS YP_001230799.1 148264093 5166106 2377143..2383349 1 NC_009483.1 PFAM: Fibronectin, type III domain protein; fibronectin I domain-containing protein 2383349 5166106 Gura_2036 Geobacter uraniireducens Rf4 fibronectin I domain-containing protein YP_001230799.1 2377143 D 351605 CDS YP_001230800.1 148264094 5166107 2383743..2384495 1 NC_009483.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; hemolysin A 2384495 5166107 Gura_2037 Geobacter uraniireducens Rf4 hemolysin A YP_001230800.1 2383743 D 351605 CDS YP_001230801.1 148264095 5166108 2384553..2384933 1 NC_009483.1 PFAM: histidine triad (HIT) protein; histidine triad (HIT) protein 2384933 5166108 Gura_2038 Geobacter uraniireducens Rf4 histidine triad (HIT) protein YP_001230801.1 2384553 D 351605 CDS YP_001230802.1 148264096 5163283 2384979..2385509 1 NC_009483.1 hypothetical protein 2385509 5163283 Gura_2039 Geobacter uraniireducens Rf4 hypothetical protein YP_001230802.1 2384979 D 351605 CDS YP_001230803.1 148264097 5163284 complement(2386073..2387371) 1 NC_009483.1 PFAM: natural resistance-associated macrophage protein; natural resistance-associated macrophage protein 2387371 5163284 Gura_2040 Geobacter uraniireducens Rf4 natural resistance-associated macrophage protein YP_001230803.1 2386073 R 351605 CDS YP_001230804.1 148264098 5163285 complement(2387446..2388726) 1 NC_009483.1 PFAM: CBS domain containing protein; MgtE intracellular region; MgtE integral membrane protein 2388726 5163285 Gura_2041 Geobacter uraniireducens Rf4 MgtE integral membrane protein YP_001230804.1 2387446 R 351605 CDS YP_001230805.1 148264099 5166584 2389117..2389899 1 NC_009483.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 2389899 5166584 Gura_2042 Geobacter uraniireducens Rf4 prolipoprotein diacylglyceryl transferase YP_001230805.1 2389117 D 351605 CDS YP_001230806.1 148264100 5166585 complement(2389928..2390353) 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; putative anti-sigma regulatory factor 2390353 5166585 Gura_2043 Geobacter uraniireducens Rf4 putative anti-sigma regulatory factor YP_001230806.1 2389928 R 351605 CDS YP_001230807.1 148264101 5166586 complement(2390373..2390708) 1 NC_009483.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 2390708 5166586 Gura_2044 Geobacter uraniireducens Rf4 anti-sigma-factor antagonist YP_001230807.1 2390373 R 351605 CDS YP_001230808.1 148264102 5162944 complement(2390853..2394092) 1 NC_009483.1 PFAM: Na+/solute symporter; GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; putative GAF sensor protein 2394092 5162944 Gura_2045 Geobacter uraniireducens Rf4 putative GAF sensor protein YP_001230808.1 2390853 R 351605 CDS YP_001230809.1 148264103 5162945 complement(2394092..2394352) 1 NC_009483.1 hypothetical protein 2394352 5162945 Gura_2046 Geobacter uraniireducens Rf4 hypothetical protein YP_001230809.1 2394092 R 351605 CDS YP_001230810.1 148264104 5162946 complement(2394352..2395914) 1 NC_009483.1 hypothetical protein 2395914 5162946 Gura_2047 Geobacter uraniireducens Rf4 hypothetical protein YP_001230810.1 2394352 R 351605 CDS YP_001230811.1 148264105 5163087 2396175..2397896 1 NC_009483.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein 2397896 5163087 Gura_2048 Geobacter uraniireducens Rf4 TPR repeat-containing protein YP_001230811.1 2396175 D 351605 CDS YP_001230812.1 148264106 5163088 2397893..2399515 1 NC_009483.1 PFAM: extracellular solute-binding protein, family 5; extracellular solute-binding protein 2399515 5163088 Gura_2049 Geobacter uraniireducens Rf4 extracellular solute-binding protein YP_001230812.1 2397893 D 351605 CDS YP_001230813.1 148264107 5163089 2399516..2400493 1 NC_009483.1 PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2400493 5163089 Gura_2050 Geobacter uraniireducens Rf4 binding-protein-dependent transport system inner membrane protein YP_001230813.1 2399516 D 351605 CDS YP_001230814.1 148264108 5163487 2401209..2402513 1 NC_009483.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 2402513 5163487 Gura_2051 Geobacter uraniireducens Rf4 RNA-directed DNA polymerase YP_001230814.1 2401209 D 351605 CDS YP_001230815.1 148264109 5163488 2402779..2403621 1 NC_009483.1 PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 2403621 5163488 Gura_2052 Geobacter uraniireducens Rf4 binding-protein-dependent transport systems inner membrane component YP_001230815.1 2402779 D 351605 CDS YP_001230816.1 148264110 5163489 2403733..2404254 1 NC_009483.1 hypothetical protein 2404254 5163489 Gura_2053 Geobacter uraniireducens Rf4 hypothetical protein YP_001230816.1 2403733 D 351605 CDS YP_001230817.1 148264111 5165697 2404233..2405126 1 NC_009483.1 PFAM: protein of unknown function DUF815; hypothetical protein 2405126 5165697 Gura_2054 Geobacter uraniireducens Rf4 hypothetical protein YP_001230817.1 2404233 D 351605 CDS YP_001230818.1 148264112 5165698 complement(2405194..2406969) 1 NC_009483.1 TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; Oligopeptidase F; pepF/M3 family oligoendopeptidase 2406969 5165698 Gura_2055 Geobacter uraniireducens Rf4 pepF/M3 family oligoendopeptidase YP_001230818.1 2405194 R 351605 CDS YP_001230819.1 148264113 5165699 complement(2407036..2407644) 1 NC_009483.1 hypothetical protein 2407644 5165699 Gura_2056 Geobacter uraniireducens Rf4 hypothetical protein YP_001230819.1 2407036 R 351605 CDS YP_001230820.1 148264114 5164490 complement(2408064..2408624) 1 NC_009483.1 PFAM: outer membrane lipoprotein Slp; outer membrane lipoprotein Slp 2408624 5164490 Gura_2057 Geobacter uraniireducens Rf4 outer membrane lipoprotein Slp YP_001230820.1 2408064 R 351605 CDS YP_001230821.1 148264115 5163998 complement(2409168..2409572) 1 NC_009483.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG 2409572 secG 5163998 secG Geobacter uraniireducens Rf4 preprotein translocase subunit SecG YP_001230821.1 2409168 R 351605 CDS YP_001230822.1 148264116 5165407 complement(2409639..2410394) 1 NC_009483.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 2410394 tpiA 5165407 tpiA Geobacter uraniireducens Rf4 triosephosphate isomerase YP_001230822.1 2409639 R 351605 CDS YP_001230823.1 148264117 5165408 complement(2410515..2411714) 1 NC_009483.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 2411714 pgk 5165408 pgk Geobacter uraniireducens Rf4 phosphoglycerate kinase YP_001230823.1 2410515 R 351605 CDS YP_001230824.1 148264118 5165409 complement(2411803..2412801) 1 NC_009483.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 2412801 5165409 Gura_2061 Geobacter uraniireducens Rf4 glyceraldehyde-3-phosphate dehydrogenase YP_001230824.1 2411803 R 351605 CDS YP_001230825.1 148264119 5163949 2413079..2415172 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; PAS fold domain protein; multi-sensor signal transduction histidine kinase 2415172 5163949 Gura_2062 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001230825.1 2413079 D 351605 CDS YP_001230826.1 148264120 5163950 2415279..2416049 1 NC_009483.1 PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 2416049 5163950 Gura_2063 Geobacter uraniireducens Rf4 beta-lactamase domain-containing protein YP_001230826.1 2415279 D 351605 CDS YP_001230827.1 148264121 5163951 2416176..2417471 1 NC_009483.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 2417471 5163951 Gura_2064 Geobacter uraniireducens Rf4 adenylosuccinate lyase YP_001230827.1 2416176 D 351605 CDS YP_001230828.1 148264122 5165540 2417464..2418543 1 NC_009483.1 PFAM: MscS Mechanosensitive ion channel; mechanosensitive ion channel MscS 2418543 5165540 Gura_2065 Geobacter uraniireducens Rf4 mechanosensitive ion channel MscS YP_001230828.1 2417464 D 351605 CDS YP_001230829.1 148264123 5165541 2418547..2421537 1 NC_009483.1 TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; phosphoribosylformylglycinamidine synthase II 2421537 5165541 Gura_2066 Geobacter uraniireducens Rf4 phosphoribosylformylglycinamidine synthase II YP_001230829.1 2418547 D 351605 CDS YP_001230830.1 148264124 5165542 2421568..2422392 1 NC_009483.1 phosphoribosylformylglycinamidine synthase 2422392 5165542 Gura_2067 Geobacter uraniireducens Rf4 phosphoribosylformylglycinamidine synthase YP_001230830.1 2421568 D 351605 CDS YP_001230831.1 148264125 5166652 2422473..2423897 1 NC_009483.1 TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase, class-II; phosphoribosyltransferase; amidophosphoribosyltransferase 2423897 5166652 Gura_2068 Geobacter uraniireducens Rf4 amidophosphoribosyltransferase YP_001230831.1 2422473 D 351605 CDS YP_001230832.1 148264126 5166653 2423890..2424438 1 NC_009483.1 TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; orotate phosphoribosyltransferase 2424438 5166653 Gura_2069 Geobacter uraniireducens Rf4 orotate phosphoribosyltransferase YP_001230832.1 2423890 D 351605 CDS YP_001230833.1 148264127 5166654 2424714..2425409 1 NC_009483.1 hypothetical protein 2425409 5166654 Gura_2070 Geobacter uraniireducens Rf4 hypothetical protein YP_001230833.1 2424714 D 351605 CDS YP_001230834.1 148264128 5165849 2425541..2427814 1 NC_009483.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; hypothetical protein 2427814 5165849 Gura_2071 Geobacter uraniireducens Rf4 hypothetical protein YP_001230834.1 2425541 D 351605 CDS YP_001230835.1 148264129 5165850 complement(2427794..2428534) 1 NC_009483.1 hypothetical protein 2428534 5165850 Gura_2072 Geobacter uraniireducens Rf4 hypothetical protein YP_001230835.1 2427794 R 351605 CDS YP_001230836.1 148264130 5165851 complement(2428807..2431065) 1 NC_009483.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 2431065 5165851 Gura_2073 Geobacter uraniireducens Rf4 malic enzyme YP_001230836.1 2428807 R 351605 CDS YP_001230837.1 148264131 5163120 2431330..2431827 1 NC_009483.1 PFAM: histidine triad (HIT) protein; histidine triad (HIT) protein 2431827 5163120 Gura_2074 Geobacter uraniireducens Rf4 histidine triad (HIT) protein YP_001230837.1 2431330 D 351605 CDS YP_001230838.1 148264132 5163121 2431824..2432810 1 NC_009483.1 PFAM: ROK family protein; ROK family protein 2432810 5163121 Gura_2075 Geobacter uraniireducens Rf4 ROK family protein YP_001230838.1 2431824 D 351605 CDS YP_001230839.1 148264133 5163122 2432835..2433923 1 NC_009483.1 PFAM: phosphofructokinase; 6-phosphofructokinase 2433923 5163122 Gura_2076 Geobacter uraniireducens Rf4 6-phosphofructokinase YP_001230839.1 2432835 D 351605 CDS YP_001230840.1 148264134 5166681 2434028..2436019 1 NC_009483.1 PFAM: GAF domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2436019 5166681 Gura_2077 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001230840.1 2434028 D 351605 CDS YP_001230841.1 148264135 5166682 2436279..2437082 1 NC_009483.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2437082 panB 5166682 panB Geobacter uraniireducens Rf4 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_001230841.1 2436279 D 351605 CDS YP_001230842.1 148264136 5166683 2437082..2437930 1 NC_009483.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 2437930 panC 5166683 panC Geobacter uraniireducens Rf4 pantoate--beta-alanine ligase YP_001230842.1 2437082 D 351605 CDS YP_001230843.1 148264137 5165985 2437935..2438333 1 NC_009483.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 2438333 5165985 Gura_2080 Geobacter uraniireducens Rf4 aspartate alpha-decarboxylase YP_001230843.1 2437935 D 351605 CDS YP_001230844.1 148264138 5165986 2438388..2439635 1 NC_009483.1 PFAM: amidohydrolase; Amidohydrolase 3; amidohydrolase 2439635 5165986 Gura_2081 Geobacter uraniireducens Rf4 amidohydrolase YP_001230844.1 2438388 D 351605 CDS YP_001230845.1 148264139 5165987 2439660..2440169 1 NC_009483.1 DNA uptake protein-like protein 2440169 5165987 Gura_2082 Geobacter uraniireducens Rf4 DNA uptake protein-like protein YP_001230845.1 2439660 D 351605 CDS YP_001230846.1 148264140 5165852 2440223..2440678 1 NC_009483.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2440678 smpB 5165852 smpB Geobacter uraniireducens Rf4 SsrA-binding protein YP_001230846.1 2440223 D 351605 CDS YP_001230847.1 148264141 5165854 2441850..2442182 1 NC_009483.1 hypothetical protein 2442182 5165854 Gura_2084 Geobacter uraniireducens Rf4 hypothetical protein YP_001230847.1 2441850 D 351605 CDS YP_001230848.1 148264142 5165283 2442891..2443334 1 NC_009483.1 hypothetical protein 2443334 5165283 Gura_2085 Geobacter uraniireducens Rf4 hypothetical protein YP_001230848.1 2442891 D 351605 CDS YP_001230849.1 148264143 5165284 2443321..2443656 1 NC_009483.1 PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 2443656 5165284 Gura_2086 Geobacter uraniireducens Rf4 DNA polymerase subunit beta YP_001230849.1 2443321 D 351605 CDS YP_001230850.1 148264144 5165991 2443720..2443983 1 NC_009483.1 PFAM: protein of unknown function UPF0270; hypothetical protein 2443983 5165991 Gura_2087 Geobacter uraniireducens Rf4 hypothetical protein YP_001230850.1 2443720 D 351605 CDS YP_001230851.1 148264145 5165992 2444249..2444431 1 NC_009483.1 hypothetical protein 2444431 5165992 Gura_2088 Geobacter uraniireducens Rf4 hypothetical protein YP_001230851.1 2444249 D 351605 CDS YP_001230852.1 148264146 5165993 2444604..2445776 1 NC_009483.1 hypothetical protein 2445776 5165993 Gura_2089 Geobacter uraniireducens Rf4 hypothetical protein YP_001230852.1 2444604 D 351605 CDS YP_001230853.1 148264147 5163865 2445773..2446549 1 NC_009483.1 PFAM: phage Gp37Gp68 family protein; phage Gp37Gp68 family protein 2446549 5163865 Gura_2090 Geobacter uraniireducens Rf4 phage Gp37Gp68 family protein YP_001230853.1 2445773 D 351605 CDS YP_001230854.1 148264148 5163866 2446546..2446731 1 NC_009483.1 hypothetical protein 2446731 5163866 Gura_2091 Geobacter uraniireducens Rf4 hypothetical protein YP_001230854.1 2446546 D 351605 CDS YP_001230855.1 148264149 5163867 2446918..2447265 1 NC_009483.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 2447265 5163867 Gura_2092 Geobacter uraniireducens Rf4 XRE family transcriptional regulator YP_001230855.1 2446918 D 351605 CDS YP_001230856.1 148264150 5164217 2447268..2448506 1 NC_009483.1 PFAM: HipA domain protein; HipA domain-containing protein 2448506 5164217 Gura_2093 Geobacter uraniireducens Rf4 HipA domain-containing protein YP_001230856.1 2447268 D 351605 CDS YP_001230857.1 148264151 5164218 2448979..2449161 1 NC_009483.1 hypothetical protein 2449161 5164218 Gura_2094 Geobacter uraniireducens Rf4 hypothetical protein YP_001230857.1 2448979 D 351605 CDS YP_001230858.1 148264152 5164219 2449291..2450811 1 NC_009483.1 PFAM: putative RNA methylase; N-6 DNA methylase; N-6 DNA methylase 2450811 5164219 Gura_2095 Geobacter uraniireducens Rf4 N-6 DNA methylase YP_001230858.1 2449291 D 351605 CDS YP_001230859.1 148264153 5163785 complement(2450808..2451200) 1 NC_009483.1 hypothetical protein 2451200 5163785 Gura_2096 Geobacter uraniireducens Rf4 hypothetical protein YP_001230859.1 2450808 R 351605 CDS YP_001230860.1 148264154 5163786 2451311..2452492 1 NC_009483.1 PFAM: restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit 2452492 5163786 Gura_2097 Geobacter uraniireducens Rf4 restriction modification system DNA specificity subunit YP_001230860.1 2451311 D 351605 CDS YP_001230861.1 148264155 5163787 2452726..2452977 1 NC_009483.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein 2452977 5163787 Gura_2098 Geobacter uraniireducens Rf4 prevent-host-death family protein YP_001230861.1 2452726 D 351605 CDS YP_001230862.1 148264156 5163177 2452974..2453231 1 NC_009483.1 TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; addiction module antitoxin 2453231 5163177 Gura_2099 Geobacter uraniireducens Rf4 addiction module antitoxin YP_001230862.1 2452974 D 351605 CDS YP_001230863.1 148264157 5165772 2455907..2456164 1 NC_009483.1 hypothetical protein 2456164 5165772 Gura_2102 Geobacter uraniireducens Rf4 hypothetical protein YP_001230863.1 2455907 D 351605 CDS YP_001230864.1 148264158 5165773 2456246..2457028 1 NC_009483.1 PFAM: DNA topoisomerase, type IA, zn finger domain protein; DNA topoisomerase type IA Zn finger domain-containing protein 2457028 5165773 Gura_2103 Geobacter uraniireducens Rf4 DNA topoisomerase type IA Zn finger domain-containing protein YP_001230864.1 2456246 D 351605 CDS YP_001230865.1 148264159 5165774 2457172..2457471 1 NC_009483.1 PFAM: protein of unknown function DUF167; hypothetical protein 2457471 5165774 Gura_2104 Geobacter uraniireducens Rf4 hypothetical protein YP_001230865.1 2457172 D 351605 CDS YP_001230866.1 148264160 5164223 2457506..2458036 1 NC_009483.1 PFAM: nitroreductase; nitroreductase 2458036 5164223 Gura_2105 Geobacter uraniireducens Rf4 nitroreductase YP_001230866.1 2457506 D 351605 CDS YP_001230867.1 148264161 5164224 2458076..2458492 1 NC_009483.1 PFAM: protein of unknown function UPF0047; hypothetical protein 2458492 5164224 Gura_2106 Geobacter uraniireducens Rf4 hypothetical protein YP_001230867.1 2458076 D 351605 CDS YP_001230868.1 148264162 5164225 complement(2458531..2459049) 1 NC_009483.1 hypothetical protein 2459049 5164225 Gura_2107 Geobacter uraniireducens Rf4 hypothetical protein YP_001230868.1 2458531 R 351605 CDS YP_001230869.1 148264163 5164372 complement(2459053..2459622) 1 NC_009483.1 hypothetical protein 2459622 5164372 Gura_2108 Geobacter uraniireducens Rf4 hypothetical protein YP_001230869.1 2459053 R 351605 CDS YP_001230870.1 148264164 5164373 complement(2459927..2460388) 1 NC_009483.1 hypothetical protein 2460388 5164373 Gura_2109 Geobacter uraniireducens Rf4 hypothetical protein YP_001230870.1 2459927 R 351605 CDS YP_001230871.1 148264165 5164374 2460672..2461376 1 NC_009483.1 hypothetical protein 2461376 5164374 Gura_2110 Geobacter uraniireducens Rf4 hypothetical protein YP_001230871.1 2460672 D 351605 CDS YP_001230872.1 148264166 5163349 2461839..2463887 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 2463887 5163349 Gura_2111 Geobacter uraniireducens Rf4 PAS/PAC sensor signal transduction histidine kinase YP_001230872.1 2461839 D 351605 CDS YP_001230873.1 148264167 5163350 complement(2464249..2466642) 1 NC_009483.1 PFAM: DEAD_2 domain protein; SMART: DEXDc2; helicase c2; DEAD-like helicases-like; DEAD/DEAH box helicase 2466642 5163350 Gura_2112 Geobacter uraniireducens Rf4 DEAD/DEAH box helicase YP_001230873.1 2464249 R 351605 CDS YP_001230874.1 148264168 5163351 2467074..2469035 1 NC_009483.1 hypothetical protein 2469035 5163351 Gura_2113 Geobacter uraniireducens Rf4 hypothetical protein YP_001230874.1 2467074 D 351605 CDS YP_001230875.1 148264169 5166289 2469483..2471027 1 NC_009483.1 PFAM: peptidase S10, serine carboxypeptidase; peptidase S10, serine carboxypeptidase 2471027 5166289 Gura_2114 Geobacter uraniireducens Rf4 peptidase S10, serine carboxypeptidase YP_001230875.1 2469483 D 351605 CDS YP_001230876.1 148264170 5166290 2471051..2472865 1 NC_009483.1 PFAM: extracellular solute-binding protein, family 3; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 2472865 5166290 Gura_2115 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001230876.1 2471051 D 351605 CDS YP_001230877.1 148264171 5166291 2472862..2474280 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 2474280 5166291 Gura_2116 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001230877.1 2472862 D 351605 CDS YP_001230878.1 148264172 5166832 complement(2474329..2475102) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein 2475102 5166832 Gura_2117 Geobacter uraniireducens Rf4 putative PAS/PAC sensor protein YP_001230878.1 2474329 R 351605 CDS YP_001230879.1 148264173 5166833 complement(2475108..2476826) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; signal transduction histidine kinase 2476826 5166833 Gura_2118 Geobacter uraniireducens Rf4 signal transduction histidine kinase YP_001230879.1 2475108 R 351605 CDS YP_001230880.1 148264174 5166834 complement(2476823..2478031) 1 NC_009483.1 PFAM: domain of unknown function DUF1745; hypothetical protein 2478031 5166834 Gura_2119 Geobacter uraniireducens Rf4 hypothetical protein YP_001230880.1 2476823 R 351605 CDS YP_001230881.1 148264175 5165751 2478451..2479776 1 NC_009483.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; anaerobic C4-dicarboxylate transporter 2479776 5165751 Gura_2120 Geobacter uraniireducens Rf4 anaerobic C4-dicarboxylate transporter YP_001230881.1 2478451 D 351605 CDS YP_001230882.1 148264176 5165752 2480014..2480382 1 NC_009483.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; putative 6-pyruvoyl tetrahydropterin synthase 2480382 5165752 Gura_2121 Geobacter uraniireducens Rf4 putative 6-pyruvoyl tetrahydropterin synthase YP_001230882.1 2480014 D 351605 CDS YP_001230883.1 148264177 5165753 2480375..2481127 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 2481127 5165753 Gura_2122 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001230883.1 2480375 D 351605 CDS YP_001230884.1 148264178 5163215 2481138..2481857 1 NC_009483.1 PFAM: Creatininase; creatininase 2481857 5163215 Gura_2123 Geobacter uraniireducens Rf4 creatininase YP_001230884.1 2481138 D 351605 CDS YP_001230885.1 148264179 5163216 complement(2482212..2483516) 1 NC_009483.1 phenylacetate--CoA ligase 2483516 5163216 Gura_2124 Geobacter uraniireducens Rf4 phenylacetate--CoA ligase YP_001230885.1 2482212 R 351605 CDS YP_001230886.1 148264180 5163217 complement(2483560..2484303) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2484303 5163217 Gura_2125 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001230886.1 2483560 R 351605 CDS YP_001230887.1 148264181 5166611 2484474..2484893 1 NC_009483.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 2484893 5166611 Gura_2126 Geobacter uraniireducens Rf4 transposase IS200-family protein YP_001230887.1 2484474 D 351605 CDS YP_001230888.1 148264182 5166612 complement(2484998..2485750) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2485750 5166612 Gura_2127 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001230888.1 2484998 R 351605 CDS YP_001230889.1 148264183 5166613 complement(2485743..2486756) 1 NC_009483.1 PFAM: inner-membrane translocator; inner-membrane translocator 2486756 5166613 Gura_2128 Geobacter uraniireducens Rf4 inner-membrane translocator YP_001230889.1 2485743 R 351605 CDS YP_001230890.1 148264184 5164453 complement(2486737..2487621) 1 NC_009483.1 PFAM: inner-membrane translocator; inner-membrane translocator 2487621 5164453 Gura_2129 Geobacter uraniireducens Rf4 inner-membrane translocator YP_001230890.1 2486737 R 351605 CDS YP_001230891.1 148264185 5164454 complement(2487843..2488985) 1 NC_009483.1 PFAM: Extracellular ligand-binding receptor; extracellular ligand-binding receptor 2488985 5164454 Gura_2130 Geobacter uraniireducens Rf4 extracellular ligand-binding receptor YP_001230891.1 2487843 R 351605 CDS YP_001230892.1 148264186 5164455 complement(2489003..2490142) 1 NC_009483.1 PFAM: Extracellular ligand-binding receptor; extracellular ligand-binding receptor 2490142 5164455 Gura_2131 Geobacter uraniireducens Rf4 extracellular ligand-binding receptor YP_001230892.1 2489003 R 351605 CDS YP_001230893.1 148264187 5166534 complement(2490168..2490599) 1 NC_009483.1 PFAM: amino acid-binding ACT domain protein; amino acid-binding ACT domain-containing protein 2490599 5166534 Gura_2132 Geobacter uraniireducens Rf4 amino acid-binding ACT domain-containing protein YP_001230893.1 2490168 R 351605 CDS YP_001230894.1 148264188 5166535 complement(2490625..2491929) 1 NC_009483.1 phenylacetate--CoA ligase 2491929 5166535 Gura_2133 Geobacter uraniireducens Rf4 phenylacetate--CoA ligase YP_001230894.1 2490625 R 351605 CDS YP_001230895.1 148264189 5166536 complement(2491993..2492574) 1 NC_009483.1 Involved in the incorporation of exogenous aryl acids in the biosynthesis of aromatic amino acids: catalysis of the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.; indolepyruvate oxidoreductase subunit beta 2492574 5166536 Gura_2134 Geobacter uraniireducens Rf4 indolepyruvate oxidoreductase subunit beta YP_001230895.1 2491993 R 351605 CDS YP_001230896.1 148264190 5164474 complement(2492571..2494322) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate binding domain-containing protein 2494322 5164474 Gura_2135 Geobacter uraniireducens Rf4 thiamine pyrophosphate binding domain-containing protein YP_001230896.1 2492571 R 351605 CDS YP_001230897.1 148264191 5164475 2494591..2494854 1 NC_009483.1 hypothetical protein 2494854 5164475 Gura_2136 Geobacter uraniireducens Rf4 hypothetical protein YP_001230897.1 2494591 D 351605 CDS YP_001230898.1 148264192 5164476 complement(2494919..2495830) 1 NC_009483.1 PFAM: Ppx/GppA phosphatase; Ppx/GppA phosphatase 2495830 5164476 Gura_2137 Geobacter uraniireducens Rf4 Ppx/GppA phosphatase YP_001230898.1 2494919 R 351605 CDS YP_001230899.1 148264193 5166031 complement(2495830..2497515) 1 NC_009483.1 PFAM: Na+/Pi-cotransporter; Na+/Pi-cotransporter 2497515 5166031 Gura_2138 Geobacter uraniireducens Rf4 Na+/Pi-cotransporter YP_001230899.1 2495830 R 351605 CDS YP_001230900.1 148264194 5166032 complement(2497534..2498172) 1 NC_009483.1 hypothetical protein 2498172 5166032 Gura_2139 Geobacter uraniireducens Rf4 hypothetical protein YP_001230900.1 2497534 R 351605 CDS YP_001230901.1 148264195 5166033 complement(2498208..2498636) 1 NC_009483.1 hypothetical protein 2498636 5166033 Gura_2140 Geobacter uraniireducens Rf4 hypothetical protein YP_001230901.1 2498208 R 351605 CDS YP_001230902.1 148264196 5166058 complement(2498633..2500195) 1 NC_009483.1 PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein 2500195 5166058 Gura_2141 Geobacter uraniireducens Rf4 OmpA/MotB domain-containing protein YP_001230902.1 2498633 R 351605 CDS YP_001230903.1 148264197 5166059 complement(2500323..2500598) 1 NC_009483.1 PFAM: histone family protein DNA-binding protein; histone family protein DNA-binding protein 2500598 5166059 Gura_2142 Geobacter uraniireducens Rf4 histone family protein DNA-binding protein YP_001230903.1 2500323 R 351605 CDS YP_001230904.1 148264198 5166060 complement(2500654..2501688) 1 NC_009483.1 hypothetical protein 2501688 5166060 Gura_2143 Geobacter uraniireducens Rf4 hypothetical protein YP_001230904.1 2500654 R 351605 CDS YP_001230905.1 148264199 5166608 complement(2501719..2503038) 1 NC_009483.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; RNA methyltransferase 2503038 5166608 Gura_2144 Geobacter uraniireducens Rf4 RNA methyltransferase YP_001230905.1 2501719 R 351605 CDS YP_001230906.1 148264200 5166609 complement(2503031..2503390) 1 NC_009483.1 hypothetical protein 2503390 5166609 Gura_2145 Geobacter uraniireducens Rf4 hypothetical protein YP_001230906.1 2503031 R 351605 CDS YP_001230907.1 148264201 5166610 2503647..2503865 1 NC_009483.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 2503865 infA 5166610 infA Geobacter uraniireducens Rf4 translation initiation factor IF-1 YP_001230907.1 2503647 D 351605 CDS YP_001230908.1 148264202 5166704 2504041..2504604 1 NC_009483.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2504604 5166704 Gura_2147 Geobacter uraniireducens Rf4 elongation factor P YP_001230908.1 2504041 D 351605 CDS YP_001230909.1 148264203 5166705 2504608..2505531 1 NC_009483.1 PFAM: tRNA synthetase, class II (D, K and N); tRNA synthetase 2505531 5166705 Gura_2148 Geobacter uraniireducens Rf4 tRNA synthetase YP_001230909.1 2504608 D 351605 CDS YP_001230910.1 148264204 5166706 complement(2505548..2506591) 1 NC_009483.1 TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; lysine 2,3-aminomutase YodO family protein 2506591 5166706 Gura_2149 Geobacter uraniireducens Rf4 lysine 2,3-aminomutase YodO family protein YP_001230910.1 2505548 R 351605 CDS YP_001230911.1 148264205 5165784 complement(2506679..2507596) 1 NC_009483.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B 2507596 5165784 Gura_2150 Geobacter uraniireducens Rf4 dihydroorotate dehydrogenase 1B YP_001230911.1 2506679 R 351605 CDS YP_001230912.1 148264206 5165785 complement(2507635..2508450) 1 NC_009483.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding subunit 2508450 5165785 Gura_2151 Geobacter uraniireducens Rf4 oxidoreductase FAD/NAD(P)-binding subunit YP_001230912.1 2507635 R 351605 CDS YP_001230913.1 148264207 5165786 complement(2508471..2508932) 1 NC_009483.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ribosomal-protein-alanine acetyltransferase 2508932 5165786 Gura_2152 Geobacter uraniireducens Rf4 ribosomal-protein-alanine acetyltransferase YP_001230913.1 2508471 R 351605 CDS YP_001230914.1 148264208 5165875 2509054..2510100 1 NC_009483.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 2510100 5165875 Gura_2153 Geobacter uraniireducens Rf4 phosphoribosylaminoimidazole synthetase YP_001230914.1 2509054 D 351605 CDS YP_001230915.1 148264209 5165876 2510133..2510753 1 NC_009483.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; phosphoribosylglycinamide formyltransferase 2510753 5165876 Gura_2154 Geobacter uraniireducens Rf4 phosphoribosylglycinamide formyltransferase YP_001230915.1 2510133 D 351605 CDS YP_001230916.1 148264210 5165877 complement(2510783..2511226) 1 NC_009483.1 PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 2511226 5165877 Gura_2155 Geobacter uraniireducens Rf4 hypothetical protein YP_001230916.1 2510783 R 351605 CDS YP_001230917.1 148264211 5166564 2512349..2513752 1 NC_009483.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 2513752 5166564 Gura_2156 Geobacter uraniireducens Rf4 RNA-directed DNA polymerase YP_001230917.1 2512349 D 351605 CDS YP_001230918.1 148264212 5165115 2514273..2515487 1 NC_009483.1 PFAM: transposase, mutator type; transposase, mutator type 2515487 5165115 Gura_2158 Geobacter uraniireducens Rf4 transposase, mutator type YP_001230918.1 2514273 D 351605 CDS YP_001230919.1 148264213 5165116 complement(2515639..2516652) 1 NC_009483.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 2516652 5165116 Gura_2159 Geobacter uraniireducens Rf4 ErfK/YbiS/YcfS/YnhG family protein YP_001230919.1 2515639 R 351605 CDS YP_001230920.1 148264214 5165117 complement(2516844..2517122) 1 NC_009483.1 hypothetical protein 2517122 5165117 Gura_2160 Geobacter uraniireducens Rf4 hypothetical protein YP_001230920.1 2516844 R 351605 CDS YP_001230921.1 148264215 5164783 complement(2517302..2518621) 1 NC_009483.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Sporulation domain protein; ErfK/YbiS/YcfS/YnhG family protein 2518621 5164783 Gura_2161 Geobacter uraniireducens Rf4 ErfK/YbiS/YcfS/YnhG family protein YP_001230921.1 2517302 R 351605 CDS YP_001230922.1 148264216 5164784 complement(2519911..2520939) 1 NC_009483.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II 2520939 5164784 Gura_2162 Geobacter uraniireducens Rf4 cytochrome d ubiquinol oxidase subunit II YP_001230922.1 2519911 R 351605 CDS YP_001230923.1 148264217 5164785 complement(2520953..2522296) 1 NC_009483.1 PFAM: cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I 2522296 5164785 Gura_2163 Geobacter uraniireducens Rf4 cytochrome bd ubiquinol oxidase subunit I YP_001230923.1 2520953 R 351605 CDS YP_001230924.1 148264218 5164422 complement(2522458..2522871) 1 NC_009483.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator 2522871 5164422 Gura_2164 Geobacter uraniireducens Rf4 BadM/Rrf2 family transcriptional regulator YP_001230924.1 2522458 R 351605 CDS YP_001230925.1 148264219 5164423 complement(2523043..2524131) 1 NC_009483.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 2524131 5164423 Gura_2165 Geobacter uraniireducens Rf4 chemotaxis-specific methylesterase YP_001230925.1 2523043 R 351605 CDS YP_001230926.1 148264220 5164424 complement(2524192..2525070) 1 NC_009483.1 PFAM: MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase 2525070 5164424 Gura_2166 Geobacter uraniireducens Rf4 protein-glutamate O-methyltransferase YP_001230926.1 2524192 R 351605 CDS YP_001230927.1 148264221 5164496 complement(2525100..2526857) 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; methyl-accepting chemotaxis sensory transducer 2526857 5164496 Gura_2167 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001230927.1 2525100 R 351605 CDS YP_001230928.1 148264222 5164497 complement(2526889..2527380) 1 NC_009483.1 PFAM: CheW domain protein; putative CheW protein 2527380 5164497 Gura_2168 Geobacter uraniireducens Rf4 putative CheW protein YP_001230928.1 2526889 R 351605 CDS YP_001230929.1 148264223 5164498 complement(2527425..2529548) 1 NC_009483.1 PFAM: CheW domain protein; ATP-binding region, ATPase domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; CheA signal transduction histidine kinase 2529548 5164498 Gura_2169 Geobacter uraniireducens Rf4 CheA signal transduction histidine kinase YP_001230929.1 2527425 R 351605 CDS YP_001230930.1 148264224 5165139 complement(2529545..2529985) 1 NC_009483.1 hypothetical protein 2529985 5165139 Gura_2170 Geobacter uraniireducens Rf4 hypothetical protein YP_001230930.1 2529545 R 351605 CDS YP_001230931.1 148264225 5165140 complement(2530462..2531904) 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 2531904 5165140 Gura_2171 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001230931.1 2530462 R 351605 CDS YP_001230932.1 148264226 5165141 complement(2531952..2533172) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 2533172 5165141 Gura_2172 Geobacter uraniireducens Rf4 PAS/PAC sensor signal transduction histidine kinase YP_001230932.1 2531952 R 351605 CDS YP_001230933.1 148264227 5164002 complement(2533348..2534613) 1 NC_009483.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein 2534613 5164002 Gura_2173 Geobacter uraniireducens Rf4 TPR repeat-containing protein YP_001230933.1 2533348 R 351605 CDS YP_001230934.1 148264228 5164003 complement(2534629..2534919) 1 NC_009483.1 PFAM: heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein 2534919 5164003 Gura_2174 Geobacter uraniireducens Rf4 heat shock protein DnaJ domain-containing protein YP_001230934.1 2534629 R 351605 CDS YP_001230935.1 148264229 5164004 complement(2535062..2536924) 1 NC_009483.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 2536924 5164004 Gura_2175 Geobacter uraniireducens Rf4 1-deoxy-D-xylulose-5-phosphate synthase YP_001230935.1 2535062 R 351605 CDS YP_001230936.1 148264230 5163541 complement(2536936..2537829) 1 NC_009483.1 PFAM: Polyprenyl synthetase; polyprenyl synthetase 2537829 5163541 Gura_2176 Geobacter uraniireducens Rf4 polyprenyl synthetase YP_001230936.1 2536936 R 351605 CDS YP_001230937.1 148264231 5163542 complement(2537866..2538096) 1 NC_009483.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 2538096 5163542 Gura_2177 Geobacter uraniireducens Rf4 exodeoxyribonuclease VII small subunit YP_001230937.1 2537866 R 351605 CDS YP_001230938.1 148264232 5163543 complement(2538340..2539650) 1 NC_009483.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 2539650 5163543 Gura_2178 Geobacter uraniireducens Rf4 homoserine dehydrogenase YP_001230938.1 2538340 R 351605 CDS YP_001230939.1 148264233 5163256 complement(2539702..2540139) 1 NC_009483.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; NusB antitermination factor 2540139 5163256 Gura_2179 Geobacter uraniireducens Rf4 NusB antitermination factor YP_001230939.1 2539702 R 351605 CDS YP_001230940.1 148264234 5163257 complement(2540139..2540606) 1 NC_009483.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 2540606 ribH 5163257 ribH Geobacter uraniireducens Rf4 6,7-dimethyl-8-ribityllumazine synthase YP_001230940.1 2540139 R 351605 CDS YP_001230941.1 148264235 5163258 complement(2540634..2541836) 1 NC_009483.1 PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; GTP cyclohydrolase II 2541836 5163258 Gura_2181 Geobacter uraniireducens Rf4 GTP cyclohydrolase II YP_001230941.1 2540634 R 351605 CDS YP_001230942.1 148264236 5164297 complement(2541919..2542566) 1 NC_009483.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2542566 5164297 Gura_2182 Geobacter uraniireducens Rf4 riboflavin synthase subunit alpha YP_001230942.1 2541919 R 351605 CDS YP_001230943.1 148264237 5164298 complement(2542551..2543657) 1 NC_009483.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein; riboflavin biosynthesis protein RibD 2543657 5164298 Gura_2183 Geobacter uraniireducens Rf4 riboflavin biosynthesis protein RibD YP_001230943.1 2542551 R 351605 CDS YP_001230944.1 148264238 5164299 complement(2543699..2544151) 1 NC_009483.1 PFAM: ATP-cone domain protein; transcriptional regulator NrdR 2544151 nrdR 5164299 nrdR Geobacter uraniireducens Rf4 transcriptional regulator NrdR YP_001230944.1 2543699 R 351605 CDS YP_001230945.1 148264239 5162724 complement(2544148..2544618) 1 NC_009483.1 PFAM: CMP/dCMP deaminase, zinc-binding; dCMP deaminase 2544618 5162724 Gura_2185 Geobacter uraniireducens Rf4 dCMP deaminase YP_001230945.1 2544148 R 351605 CDS YP_001230946.1 148264240 5162725 complement(2544759..2545490) 1 NC_009483.1 hypothetical protein 2545490 5162725 Gura_2186 Geobacter uraniireducens Rf4 hypothetical protein YP_001230946.1 2544759 R 351605 CDS YP_001230947.1 148264241 5162726 complement(2545510..2546466) 1 NC_009483.1 hypothetical protein 2546466 5162726 Gura_2187 Geobacter uraniireducens Rf4 hypothetical protein YP_001230947.1 2545510 R 351605 CDS YP_001230948.1 148264242 5166597 complement(2546546..2547733) 1 NC_009483.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 2547733 5166597 Gura_2188 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001230948.1 2546546 R 351605 CDS YP_001230949.1 148264243 5166598 complement(2547907..2548452) 1 NC_009483.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase 2548452 5166598 Gura_2189 Geobacter uraniireducens Rf4 pyruvate ferredoxin/flavodoxin oxidoreductase YP_001230949.1 2547907 R 351605 CDS YP_001230950.1 148264244 5166599 complement(2548477..2549295) 1 NC_009483.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 2549295 5166599 Gura_2190 Geobacter uraniireducens Rf4 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_001230950.1 2548477 R 351605 CDS YP_001230951.1 148264245 5162775 complement(2549298..2550431) 1 NC_009483.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 2550431 5162775 Gura_2191 Geobacter uraniireducens Rf4 2-oxoglutarate ferredoxin oxidoreductase subunit alpha YP_001230951.1 2549298 R 351605 CDS YP_001230952.1 148264246 5162776 complement(2550455..2550649) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 2550649 5162776 Gura_2192 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001230952.1 2550455 R 351605 CDS YP_001230953.1 148264247 5162777 complement(2550831..2551787) 1 NC_009483.1 Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 2551787 5162777 Gura_2193 Geobacter uraniireducens Rf4 malate dehydrogenase YP_001230953.1 2550831 R 351605 CDS YP_001230954.1 148264248 5163859 complement(2551832..2554063) 1 NC_009483.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; isocitrate dehydrogenase 2554063 5163859 Gura_2194 Geobacter uraniireducens Rf4 isocitrate dehydrogenase YP_001230954.1 2551832 R 351605 CDS YP_001230955.1 148264249 5163860 complement(2554406..2555122) 1 NC_009483.1 PFAM: Peptidoglycan-binding LysM; peptidoglycan-binding LysM 2555122 5163860 Gura_2195 Geobacter uraniireducens Rf4 peptidoglycan-binding LysM YP_001230955.1 2554406 R 351605 CDS YP_001230956.1 148264250 5163861 complement(2555132..2556913) 1 NC_009483.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 2556913 aspS 5163861 aspS Geobacter uraniireducens Rf4 aspartyl-tRNA synthetase YP_001230956.1 2555132 R 351605 CDS YP_001230957.1 148264251 5162718 complement(2557074..2557793) 1 NC_009483.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; GntR family transcriptional regulator 2557793 5162718 Gura_2197 Geobacter uraniireducens Rf4 GntR family transcriptional regulator YP_001230957.1 2557074 R 351605 CDS YP_001230958.1 148264252 5162719 complement(2557869..2559110) 1 NC_009483.1 PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 2559110 5162719 Gura_2198 Geobacter uraniireducens Rf4 hypothetical protein YP_001230958.1 2557869 R 351605 CDS YP_001230959.1 148264253 5162720 complement(2559192..2560565) 1 NC_009483.1 PFAM: FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 2560565 5162720 Gura_2199 Geobacter uraniireducens Rf4 FAD linked oxidase domain-containing protein YP_001230959.1 2559192 R 351605 CDS YP_001230960.1 148264254 5164992 complement(2560651..2562600) 1 NC_009483.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; L-lactate transport 2562600 5164992 Gura_2200 Geobacter uraniireducens Rf4 L-lactate transport YP_001230960.1 2560651 R 351605 CDS YP_001230961.1 148264255 5166349 2564185..2564718 1 NC_009483.1 hypothetical protein 2564718 5166349 Gura_2203 Geobacter uraniireducens Rf4 hypothetical protein YP_001230961.1 2564185 D 351605 CDS YP_001230962.1 148264256 5166350 2564715..2565740 1 NC_009483.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 2565740 5166350 Gura_2204 Geobacter uraniireducens Rf4 integrase catalytic subunit YP_001230962.1 2564715 D 351605 CDS YP_001230963.1 148264257 5166351 complement(2565808..2566779) 1 NC_009483.1 TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 36K type 2566779 5166351 Gura_2205 Geobacter uraniireducens Rf4 signal peptide peptidase SppA, 36K type YP_001230963.1 2565808 R 351605 CDS YP_001230964.1 148264258 5166444 complement(2566865..2567311) 1 NC_009483.1 hypothetical protein 2567311 5166444 Gura_2206 Geobacter uraniireducens Rf4 hypothetical protein YP_001230964.1 2566865 R 351605 CDS YP_001230965.1 148264259 5166445 complement(2567490..2567969) 1 NC_009483.1 PFAM: Desulfoferrodoxin, ferrous iron-binding region; desulfoferrodoxin, ferrous iron-binding region 2567969 5166445 Gura_2207 Geobacter uraniireducens Rf4 desulfoferrodoxin, ferrous iron-binding region YP_001230965.1 2567490 R 351605 CDS YP_001230966.1 148264260 5166446 2568156..2569040 1 NC_009483.1 PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 2569040 5166446 Gura_2208 Geobacter uraniireducens Rf4 hypothetical protein YP_001230966.1 2568156 D 351605 CDS YP_001230967.1 148264261 5165595 complement(2569062..2569391) 1 NC_009483.1 hypothetical protein 2569391 5165595 Gura_2209 Geobacter uraniireducens Rf4 hypothetical protein YP_001230967.1 2569062 R 351605 CDS YP_001230968.1 148264262 5165596 complement(2570134..2571318) 1 NC_009483.1 hypothetical protein 2571318 5165596 Gura_2210 Geobacter uraniireducens Rf4 hypothetical protein YP_001230968.1 2570134 R 351605 CDS YP_001230969.1 148264263 5165597 complement(2571329..2571823) 1 NC_009483.1 hypothetical protein 2571823 5165597 Gura_2211 Geobacter uraniireducens Rf4 hypothetical protein YP_001230969.1 2571329 R 351605 CDS YP_001230970.1 148264264 5165869 complement(2571804..2573534) 1 NC_009483.1 PFAM: UBA/THIF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 2573534 5165869 Gura_2212 Geobacter uraniireducens Rf4 UBA/THIF-type NAD/FAD binding protein YP_001230970.1 2571804 R 351605 CDS YP_001230971.1 148264265 5165870 complement(2573527..2574567) 1 NC_009483.1 hypothetical protein 2574567 5165870 Gura_2213 Geobacter uraniireducens Rf4 hypothetical protein YP_001230971.1 2573527 R 351605 CDS YP_001230972.1 148264266 5165871 complement(2574594..2574884) 1 NC_009483.1 hypothetical protein 2574884 5165871 Gura_2214 Geobacter uraniireducens Rf4 hypothetical protein YP_001230972.1 2574594 R 351605 CDS YP_001230973.1 148264267 5164462 complement(2574893..2575408) 1 NC_009483.1 PFAM: protein of unknown function DUF955; hypothetical protein 2575408 5164462 Gura_2215 Geobacter uraniireducens Rf4 hypothetical protein YP_001230973.1 2574893 R 351605 CDS YP_001230974.1 148264268 5164463 complement(2575405..2576292) 1 NC_009483.1 hypothetical protein 2576292 5164463 Gura_2216 Geobacter uraniireducens Rf4 hypothetical protein YP_001230974.1 2575405 R 351605 CDS YP_001230975.1 148264269 5164464 complement(2576304..2576642) 1 NC_009483.1 hypothetical protein 2576642 5164464 Gura_2217 Geobacter uraniireducens Rf4 hypothetical protein YP_001230975.1 2576304 R 351605 CDS YP_001230976.1 148264270 5166811 complement(2577532..2577750) 1 NC_009483.1 hypothetical protein 2577750 5166811 Gura_2218 Geobacter uraniireducens Rf4 hypothetical protein YP_001230976.1 2577532 R 351605 CDS YP_001230977.1 148264271 5166813 complement(2578094..2579704) 1 NC_009483.1 hypothetical protein 2579704 5166813 Gura_2220 Geobacter uraniireducens Rf4 hypothetical protein YP_001230977.1 2578094 R 351605 CDS YP_001230978.1 148264272 5164480 complement(2579779..2579907) 1 NC_009483.1 hypothetical protein 2579907 5164480 Gura_2221 Geobacter uraniireducens Rf4 hypothetical protein YP_001230978.1 2579779 R 351605 CDS YP_001230979.1 148264273 5164481 complement(2579989..2580669) 1 NC_009483.1 hypothetical protein 2580669 5164481 Gura_2222 Geobacter uraniireducens Rf4 hypothetical protein YP_001230979.1 2579989 R 351605 CDS YP_001230980.1 148264274 5163430 complement(2581561..2581926) 1 NC_009483.1 hypothetical protein 2581926 5163430 Gura_2224 Geobacter uraniireducens Rf4 hypothetical protein YP_001230980.1 2581561 R 351605 CDS YP_001230981.1 148264275 5164115 complement(2582096..2583130) 1 NC_009483.1 hypothetical protein 2583130 5164115 Gura_2225 Geobacter uraniireducens Rf4 hypothetical protein YP_001230981.1 2582096 R 351605 CDS YP_001230982.1 148264276 5164116 complement(2583234..2584169) 1 NC_009483.1 PFAM: glutamyl-tRNA synthetase, class Ic; glutamyl-tRNA synthetase 2584169 5164116 Gura_2226 Geobacter uraniireducens Rf4 glutamyl-tRNA synthetase YP_001230982.1 2583234 R 351605 CDS YP_001230983.1 148264277 5164117 complement(2584270..2584584) 1 NC_009483.1 PFAM: protein of unknown function DUF1255; hypothetical protein 2584584 5164117 Gura_2227 Geobacter uraniireducens Rf4 hypothetical protein YP_001230983.1 2584270 R 351605 CDS YP_001230984.1 148264278 5163605 complement(2584776..2586188) 1 NC_009483.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; glutamine synthetase 2586188 5163605 Gura_2228 Geobacter uraniireducens Rf4 glutamine synthetase YP_001230984.1 2584776 R 351605 CDS YP_001230985.1 148264279 5163606 complement(2586224..2586562) 1 NC_009483.1 PFAM: nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 2586562 5163606 Gura_2229 Geobacter uraniireducens Rf4 nitrogen regulatory protein P-II YP_001230985.1 2586224 R 351605 CDS YP_001230986.1 148264280 5163607 complement(2586848..2587765) 1 NC_009483.1 catalyzes the formation of 2-dehydropantoate from (R)-pantoate; 2-dehydropantoate 2-reductase 2587765 5163607 Gura_2230 Geobacter uraniireducens Rf4 2-dehydropantoate 2-reductase YP_001230986.1 2586848 R 351605 CDS YP_001230987.1 148264281 5163055 2587926..2588669 1 NC_009483.1 PFAM: peptidase M23B; peptidase M23B 2588669 5163055 Gura_2231 Geobacter uraniireducens Rf4 peptidase M23B YP_001230987.1 2587926 D 351605 CDS YP_001230988.1 148264282 5163056 complement(2588698..2591226) 1 NC_009483.1 TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent, C-terminal domain protein; SMART: DEAD-like helicases-like; ATP-dependent helicase HrpB 2591226 5163056 Gura_2232 Geobacter uraniireducens Rf4 ATP-dependent helicase HrpB YP_001230988.1 2588698 R 351605 CDS YP_001230989.1 148264283 5163057 complement(2591240..2591917) 1 NC_009483.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase 2591917 5163057 Gura_2233 Geobacter uraniireducens Rf4 HAD family hydrolase YP_001230989.1 2591240 R 351605 CDS YP_001230990.1 148264284 5162636 complement(2591999..2592805) 1 NC_009483.1 PFAM: phosphoesterase, PA-phosphatase related; PA-phosphatase-like protein 2592805 5162636 Gura_2234 Geobacter uraniireducens Rf4 PA-phosphatase-like protein YP_001230990.1 2591999 R 351605 CDS YP_001230991.1 148264285 5162637 complement(2592875..2594065) 1 NC_009483.1 PFAM: lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 2594065 5162637 Gura_2235 Geobacter uraniireducens Rf4 lipopolysaccharide biosynthesis protein YP_001230991.1 2592875 R 351605 CDS YP_001230992.1 148264286 5162638 complement(2594078..2596924) 1 NC_009483.1 PFAM: polysaccharide export protein; Fibronectin, type III domain protein; polysaccharide export protein 2596924 5162638 Gura_2236 Geobacter uraniireducens Rf4 polysaccharide export protein YP_001230992.1 2594078 R 351605 CDS YP_001230993.1 148264287 5164571 complement(2597424..2597969) 1 NC_009483.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase 2597969 5164571 Gura_2237 Geobacter uraniireducens Rf4 pyruvate ferredoxin/flavodoxin oxidoreductase YP_001230993.1 2597424 R 351605 CDS YP_001230994.1 148264288 5164572 complement(2598024..2598767) 1 NC_009483.1 PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate binding domain-containing protein 2598767 5164572 Gura_2238 Geobacter uraniireducens Rf4 thiamine pyrophosphate binding domain-containing protein YP_001230994.1 2598024 R 351605 CDS YP_001230995.1 148264289 5162624 complement(2598907..2599962) 1 NC_009483.1 catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; 2-ketoisovalerate ferredoxin reductase 2599962 5162624 Gura_2239 Geobacter uraniireducens Rf4 2-ketoisovalerate ferredoxin reductase YP_001230995.1 2598907 R 351605 CDS YP_001230996.1 148264290 5162625 complement(2600084..2600287) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 2600287 5162625 Gura_2240 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001230996.1 2600084 R 351605 CDS YP_001230997.1 148264291 5162626 2600480..2601049 1 NC_009483.1 PFAM: ROSMUCR transcriptional regulator; MucR family transcriptional regulator 2601049 5162626 Gura_2241 Geobacter uraniireducens Rf4 MucR family transcriptional regulator YP_001230997.1 2600480 D 351605 CDS YP_001230998.1 148264292 5166684 2601257..2602246 1 NC_009483.1 TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 2602246 5166684 Gura_2242 Geobacter uraniireducens Rf4 biotin synthase YP_001230998.1 2601257 D 351605 CDS YP_001230999.1 148264293 5166685 2602328..2603059 1 NC_009483.1 TIGRFAM: dethiobiotin synthase; dethiobiotin synthase 2603059 5166685 Gura_2243 Geobacter uraniireducens Rf4 dethiobiotin synthase YP_001230999.1 2602328 D 351605 CDS YP_001231000.1 148264294 5166686 2603090..2604457 1 NC_009483.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2604457 5166686 Gura_2244 Geobacter uraniireducens Rf4 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_001231000.1 2603090 D 351605 CDS YP_001231001.1 148264295 5162906 complement(2604647..2605039) 1 NC_009483.1 hypothetical protein 2605039 5162906 Gura_2245 Geobacter uraniireducens Rf4 hypothetical protein YP_001231001.1 2604647 R 351605 CDS YP_001231002.1 148264296 5162907 complement(2605322..2607949) 1 NC_009483.1 PFAM: CBS domain containing protein; phosphoesterase, RecJ domain protein; Polynucleotide adenylyltransferase region; phosphoesterase, DHHA1; hypothetical protein 2607949 5162907 Gura_2246 Geobacter uraniireducens Rf4 hypothetical protein YP_001231002.1 2605322 R 351605 CDS YP_001231003.1 148264297 5162908 complement(2607949..2608752) 1 NC_009483.1 PFAM: protein of unknown function DUF52; hypothetical protein 2608752 5162908 Gura_2247 Geobacter uraniireducens Rf4 hypothetical protein YP_001231003.1 2607949 R 351605 CDS YP_001231004.1 148264298 5163402 complement(2608892..2609461) 1 NC_009483.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; putative transcriptional regulator 2609461 5163402 Gura_2248 Geobacter uraniireducens Rf4 putative transcriptional regulator YP_001231004.1 2608892 R 351605 CDS YP_001231005.1 148264299 5163403 complement(2609442..2610263) 1 NC_009483.1 PFAM: chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA 2610263 5163403 Gura_2249 Geobacter uraniireducens Rf4 chromosome segregation and condensation protein ScpA YP_001231005.1 2609442 R 351605 CDS YP_001231006.1 148264300 5163404 complement(2610332..2611315) 1 NC_009483.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 2611315 5163404 Gura_2250 Geobacter uraniireducens Rf4 tryptophanyl-tRNA synthetase YP_001231006.1 2610332 R 351605 CDS YP_001231007.1 148264301 5162691 complement(2611457..2612137) 1 NC_009483.1 PFAM: peptidase M50; peptidase M50 2612137 5162691 Gura_2251 Geobacter uraniireducens Rf4 peptidase M50 YP_001231007.1 2611457 R 351605 CDS YP_001231008.1 148264302 5162692 2612343..2614616 1 NC_009483.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; RNA-binding S1 domain-containing protein 2614616 5162692 Gura_2252 Geobacter uraniireducens Rf4 RNA-binding S1 domain-containing protein YP_001231008.1 2612343 D 351605 CDS YP_001231009.1 148264303 5162693 complement(2614699..2615139) 1 NC_009483.1 hypothetical protein 2615139 5162693 Gura_2253 Geobacter uraniireducens Rf4 hypothetical protein YP_001231009.1 2614699 R 351605 CDS YP_001231010.1 148264304 5162700 complement(2615586..2618621) 1 NC_009483.1 PFAM: PKD domain containing protein; PKD domain-containing protein 2618621 5162700 Gura_2254 Geobacter uraniireducens Rf4 PKD domain-containing protein YP_001231010.1 2615586 R 351605 CDS YP_001231011.1 148264305 5163435 complement(2619382..2619987) 1 NC_009483.1 hydrolyzes non-standard nucleotides such as xanthine and inosine; nucleoside-triphosphatase 2619987 5163435 Gura_2255 Geobacter uraniireducens Rf4 nucleoside-triphosphatase YP_001231011.1 2619382 R 351605 CDS YP_001231012.1 148264306 5163070 complement(2619984..2620700) 1 NC_009483.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 2620700 rph 5163070 rph Geobacter uraniireducens Rf4 ribonuclease PH YP_001231012.1 2619984 R 351605 CDS YP_001231013.1 148264307 5163071 complement(2620843..2622090) 1 NC_009483.1 hypothetical protein 2622090 5163071 Gura_2257 Geobacter uraniireducens Rf4 hypothetical protein YP_001231013.1 2620843 R 351605 CDS YP_001231014.1 148264308 5162843 complement(2622105..2623166) 1 NC_009483.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; diguanylate cyclase 2623166 5162843 Gura_2258 Geobacter uraniireducens Rf4 diguanylate cyclase YP_001231014.1 2622105 R 351605 CDS YP_001231015.1 148264309 5162844 2623408..2625636 1 NC_009483.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2625636 5162844 Gura_2259 Geobacter uraniireducens Rf4 ribonucleotide-diphosphate reductase subunit alpha YP_001231015.1 2623408 D 351605 CDS YP_001231016.1 148264310 5162845 2625837..2626460 1 NC_009483.1 hypothetical protein 2626460 5162845 Gura_2260 Geobacter uraniireducens Rf4 hypothetical protein YP_001231016.1 2625837 D 351605 CDS YP_001231017.1 148264311 5163238 2626493..2626723 1 NC_009483.1 PFAM: helix-turn-helix domain protein; XRE family plasmid maintenance system antidote protein 2626723 5163238 Gura_2261 Geobacter uraniireducens Rf4 XRE family plasmid maintenance system antidote protein YP_001231017.1 2626493 D 351605 CDS YP_001231018.1 148264312 5163240 2627278..2627754 1 NC_009483.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2627754 5163240 Gura_2263 Geobacter uraniireducens Rf4 glyoxalase/bleomycin resistance protein/dioxygenase YP_001231018.1 2627278 D 351605 CDS YP_001231019.1 148264313 5163553 2627961..2628428 1 NC_009483.1 hypothetical protein 2628428 5163553 Gura_2264 Geobacter uraniireducens Rf4 hypothetical protein YP_001231019.1 2627961 D 351605 CDS YP_001231020.1 148264314 5163555 2628987..2630228 1 NC_009483.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 2630228 5163555 Gura_2266 Geobacter uraniireducens Rf4 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001231020.1 2628987 D 351605 CDS YP_001231021.1 148264315 5162604 2630872..2631318 1 NC_009483.1 DNA-binding protein 2631318 5162604 Gura_2267 Geobacter uraniireducens Rf4 DNA-binding protein YP_001231021.1 2630872 D 351605 CDS YP_001231022.1 148264316 5162605 2631409..2631762 1 NC_009483.1 hypothetical protein 2631762 5162605 Gura_2268 Geobacter uraniireducens Rf4 hypothetical protein YP_001231022.1 2631409 D 351605 CDS YP_001231023.1 148264317 5164274 2632583..2633209 1 NC_009483.1 PFAM: Allergen V5/Tpx-1 family protein; Allergen V5/Tpx-1 family protein 2633209 5164274 Gura_2270 Geobacter uraniireducens Rf4 Allergen V5/Tpx-1 family protein YP_001231023.1 2632583 D 351605 CDS YP_001231024.1 148264318 5164275 2633251..2633742 1 NC_009483.1 hypothetical protein 2633742 5164275 Gura_2271 Geobacter uraniireducens Rf4 hypothetical protein YP_001231024.1 2633251 D 351605 CDS YP_001231025.1 148264319 5164276 2633925..2634224 1 NC_009483.1 PFAM: protein of unknown function DUF497; hypothetical protein 2634224 5164276 Gura_2272 Geobacter uraniireducens Rf4 hypothetical protein YP_001231025.1 2633925 D 351605 CDS YP_001231026.1 148264320 5163075 2634193..2634465 1 NC_009483.1 hypothetical protein 2634465 5163075 Gura_2273 Geobacter uraniireducens Rf4 hypothetical protein YP_001231026.1 2634193 D 351605 CDS YP_001231027.1 148264321 5163076 2634517..2635629 1 NC_009483.1 putative virion core protein (lumpy skin disease virus)-like protein 2635629 5163076 Gura_2274 Geobacter uraniireducens Rf4 putative virion core protein (lumpy skin disease virus)-like protein YP_001231027.1 2634517 D 351605 CDS YP_001231028.1 148264322 5163077 2635708..2636412 1 NC_009483.1 hypothetical protein 2636412 5163077 Gura_2275 Geobacter uraniireducens Rf4 hypothetical protein YP_001231028.1 2635708 D 351605 CDS YP_001231029.1 148264323 5164262 2636476..2637258 1 NC_009483.1 PFAM: amidohydrolase 2; amidohydrolase 2 2637258 5164262 Gura_2276 Geobacter uraniireducens Rf4 amidohydrolase 2 YP_001231029.1 2636476 D 351605 CDS YP_001231030.1 148264324 5164263 2637380..2637952 1 NC_009483.1 PFAM: Rubrerythrin; rubrerythrin 2637952 5164263 Gura_2277 Geobacter uraniireducens Rf4 rubrerythrin YP_001231030.1 2637380 D 351605 CDS YP_001231031.1 148264325 5164264 2638103..2638372 1 NC_009483.1 PFAM: Excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C 2638372 5164264 Gura_2278 Geobacter uraniireducens Rf4 excinuclease ABC subunit C YP_001231031.1 2638103 D 351605 CDS YP_001231032.1 148264326 5164477 2638452..2639588 1 NC_009483.1 PFAM: General secretory system II, protein E domain protein; general secretion pathway protein E 2639588 5164477 Gura_2279 Geobacter uraniireducens Rf4 general secretion pathway protein E YP_001231032.1 2638452 D 351605 CDS YP_001231033.1 148264327 5164478 complement(2639706..2640059) 1 NC_009483.1 PFAM: membrane protein of unknown function; hypothetical protein 2640059 5164478 Gura_2280 Geobacter uraniireducens Rf4 hypothetical protein YP_001231033.1 2639706 R 351605 CDS YP_001231034.1 148264328 5164479 2640403..2643078 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 2643078 5164479 Gura_2281 Geobacter uraniireducens Rf4 PAS/PAC sensor signal transduction histidine kinase YP_001231034.1 2640403 D 351605 CDS YP_001231035.1 148264329 5164332 complement(2643334..2644275) 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 2644275 5164332 Gura_2282 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001231035.1 2643334 R 351605 CDS YP_001231036.1 148264330 5164333 complement(2644283..2646385) 1 NC_009483.1 PFAM: protein of unknown function DUF255; hypothetical protein 2646385 5164333 Gura_2283 Geobacter uraniireducens Rf4 hypothetical protein YP_001231036.1 2644283 R 351605 CDS YP_001231037.1 148264331 5164334 2646530..2647771 1 NC_009483.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 2647771 5164334 Gura_2284 Geobacter uraniireducens Rf4 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001231037.1 2646530 D 351605 CDS YP_001231038.1 148264332 5164556 complement(2647936..2648832) 1 NC_009483.1 TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 36K type 2648832 5164556 Gura_2285 Geobacter uraniireducens Rf4 signal peptide peptidase SppA, 36K type YP_001231038.1 2647936 R 351605 CDS YP_001231039.1 148264333 5164557 2648932..2649402 1 NC_009483.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; phosphodiesterase 2649402 5164557 Gura_2286 Geobacter uraniireducens Rf4 phosphodiesterase YP_001231039.1 2648932 D 351605 CDS YP_001231040.1 148264334 5164558 complement(2649432..2649824) 1 NC_009483.1 hypothetical protein 2649824 5164558 Gura_2287 Geobacter uraniireducens Rf4 hypothetical protein YP_001231040.1 2649432 R 351605 CDS YP_001231041.1 148264335 5164912 complement(2649875..2650258) 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 2650258 5164912 Gura_2288 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001231041.1 2649875 R 351605 CDS YP_001231042.1 148264336 5164913 complement(2650305..2651267) 1 NC_009483.1 PFAM: protein of unknown function DUF534; hypothetical protein 2651267 5164913 Gura_2289 Geobacter uraniireducens Rf4 hypothetical protein YP_001231042.1 2650305 R 351605 CDS YP_001231043.1 148264337 5164914 complement(2651293..2653431) 1 NC_009483.1 hypothetical protein 2653431 5164914 Gura_2290 Geobacter uraniireducens Rf4 hypothetical protein YP_001231043.1 2651293 R 351605 CDS YP_001231044.1 148264338 5165076 complement(2653470..2654477) 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 2654477 5165076 Gura_2291 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001231044.1 2653470 R 351605 CDS YP_001231045.1 148264339 5165077 complement(2654478..2655317) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2655317 5165077 Gura_2292 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001231045.1 2654478 R 351605 CDS YP_001231046.1 148264340 5165078 complement(2655428..2655865) 1 NC_009483.1 hypothetical protein 2655865 5165078 Gura_2293 Geobacter uraniireducens Rf4 hypothetical protein YP_001231046.1 2655428 R 351605 CDS YP_001231047.1 148264341 5164330 complement(2657084..2658016) 1 NC_009483.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 2658016 5164330 Gura_2295 Geobacter uraniireducens Rf4 hypothetical protein YP_001231047.1 2657084 R 351605 CDS YP_001231048.1 148264342 5164331 complement(2658037..2658885) 1 NC_009483.1 hypothetical protein 2658885 5164331 Gura_2296 Geobacter uraniireducens Rf4 hypothetical protein YP_001231048.1 2658037 R 351605 CDS YP_001231049.1 148264343 5163445 complement(2658863..2660020) 1 NC_009483.1 PFAM: histone deacetylase superfamily; histone deacetylase superfamily protein 2660020 5163445 Gura_2297 Geobacter uraniireducens Rf4 histone deacetylase superfamily protein YP_001231049.1 2658863 R 351605 CDS YP_001231050.1 148264344 5163446 2660307..2661527 1 NC_009483.1 PFAM: Rh family protein/ammonium transporter; Rh family protein/ammonium transporter 2661527 5163446 Gura_2298 Geobacter uraniireducens Rf4 Rh family protein/ammonium transporter YP_001231050.1 2660307 D 351605 CDS YP_001231051.1 148264345 5163447 2661660..2662487 1 NC_009483.1 PFAM: response regulator receiver; General secretory system II, protein E domain protein; response regulator receiver protein 2662487 5163447 Gura_2299 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001231051.1 2661660 D 351605 CDS YP_001231052.1 148264346 5165291 complement(2662537..2663940) 1 NC_009483.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 2663940 gltX 5165291 gltX Geobacter uraniireducens Rf4 glutamyl-tRNA synthetase YP_001231052.1 2662537 R 351605 CDS YP_001231053.1 148264347 5165292 complement(2664027..2664251) 1 NC_009483.1 PFAM: protein of unknown function DUF329; hypothetical protein 2664251 5165292 Gura_2301 Geobacter uraniireducens Rf4 hypothetical protein YP_001231053.1 2664027 R 351605 CDS YP_001231054.1 148264348 5165293 complement(2664290..2665264) 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 2665264 5165293 Gura_2302 Geobacter uraniireducens Rf4 NAD-dependent epimerase/dehydratase YP_001231054.1 2664290 R 351605 CDS YP_001231055.1 148264349 5165344 complement(2665281..2666021) 1 NC_009483.1 PFAM: Sporulation domain protein; sporulation domain-containing protein 2666021 5165344 Gura_2303 Geobacter uraniireducens Rf4 sporulation domain-containing protein YP_001231055.1 2665281 R 351605 CDS YP_001231056.1 148264350 5165345 complement(2666038..2667723) 1 NC_009483.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 2667723 argS 5165345 argS Geobacter uraniireducens Rf4 arginyl-tRNA synthetase YP_001231056.1 2666038 R 351605 CDS YP_001231057.1 148264351 5165346 complement(2667723..2667905) 1 NC_009483.1 hypothetical protein 2667905 5165346 Gura_2305 Geobacter uraniireducens Rf4 hypothetical protein YP_001231057.1 2667723 R 351605 CDS YP_001231058.1 148264352 5165312 complement(2668066..2668356) 1 NC_009483.1 PFAM: Septum formation initiator; septum formation initiator 2668356 5165312 Gura_2306 Geobacter uraniireducens Rf4 septum formation initiator YP_001231058.1 2668066 R 351605 CDS YP_001231059.1 148264353 5165313 complement(2668376..2669311) 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 2669311 5165313 Gura_2307 Geobacter uraniireducens Rf4 NAD-dependent epimerase/dehydratase YP_001231059.1 2668376 R 351605 CDS YP_001231060.1 148264354 5165314 complement(2669360..2670712) 1 NC_009483.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose 6-dehydrogenase 2670712 5165314 Gura_2308 Geobacter uraniireducens Rf4 UDP-glucose 6-dehydrogenase YP_001231060.1 2669360 R 351605 CDS YP_001231061.1 148264355 5165506 complement(2671044..2671871) 1 NC_009483.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 2671871 ksgA 5165506 ksgA Geobacter uraniireducens Rf4 dimethyladenosine transferase YP_001231061.1 2671044 R 351605 CDS YP_001231062.1 148264356 5165507 complement(2671871..2672902) 1 NC_009483.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 2672902 5165507 Gura_2310 Geobacter uraniireducens Rf4 putative DNA-binding/iron metalloprotein/AP endonuclease YP_001231062.1 2671871 R 351605 CDS YP_001231063.1 148264357 5165508 complement(2672985..2674346) 1 NC_009483.1 PFAM: PhoH family protein; SMART: Nucleotide binding protein, PINc; PhoH family protein 2674346 5165508 Gura_2311 Geobacter uraniireducens Rf4 PhoH family protein YP_001231063.1 2672985 R 351605 CDS YP_001231064.1 148264358 5164559 complement(2674324..2674605) 1 NC_009483.1 hypothetical protein 2674605 5164559 Gura_2312 Geobacter uraniireducens Rf4 hypothetical protein YP_001231064.1 2674324 R 351605 CDS YP_001231065.1 148264359 5164560 complement(2674608..2675750) 1 NC_009483.1 TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase, class V; cysteine desulfurase 2675750 5164560 Gura_2313 Geobacter uraniireducens Rf4 cysteine desulfurase YP_001231065.1 2674608 R 351605 CDS YP_001231066.1 148264360 5164561 complement(2675775..2676842) 1 NC_009483.1 PFAM: phosphoesterase, RecJ domain protein; phosphoesterase domain-containing protein 2676842 5164561 Gura_2314 Geobacter uraniireducens Rf4 phosphoesterase domain-containing protein YP_001231066.1 2675775 R 351605 CDS YP_001231067.1 148264361 5165591 complement(2677011..2677166) 1 NC_009483.1 hypothetical protein 2677166 5165591 Gura_2315 Geobacter uraniireducens Rf4 hypothetical protein YP_001231067.1 2677011 R 351605 CDS YP_001231068.1 148264362 5165592 complement(2677307..2677876) 1 NC_009483.1 hypothetical protein 2677876 5165592 Gura_2316 Geobacter uraniireducens Rf4 hypothetical protein YP_001231068.1 2677307 R 351605 CDS YP_001231069.1 148264363 5165593 complement(2677873..2679459) 1 NC_009483.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; putative alpha-isopropylmalate/homocitrate synthase family transferase 2679459 5165593 Gura_2317 Geobacter uraniireducens Rf4 putative alpha-isopropylmalate/homocitrate synthase family transferase YP_001231069.1 2677873 R 351605 CDS YP_001231070.1 148264364 5165443 complement(2679606..2680829) 1 NC_009483.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 2680829 5165443 Gura_2318 Geobacter uraniireducens Rf4 aspartate kinase YP_001231070.1 2679606 R 351605 CDS YP_001231071.1 148264365 5165444 complement(2680922..2681410) 1 NC_009483.1 PFAM: protein of unknown function UPF0079; hypothetical protein 2681410 5165444 Gura_2319 Geobacter uraniireducens Rf4 hypothetical protein YP_001231071.1 2680922 R 351605 CDS YP_001231072.1 148264366 5165445 complement(2681407..2681859) 1 NC_009483.1 PFAM: CBS domain containing protein; hypothetical protein 2681859 5165445 Gura_2320 Geobacter uraniireducens Rf4 hypothetical protein YP_001231072.1 2681407 R 351605 CDS YP_001231073.1 148264367 5165958 complement(2681910..2683475) 1 NC_009483.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family N-terminal domain protein; carbohydrate kinase 2683475 5165958 Gura_2321 Geobacter uraniireducens Rf4 carbohydrate kinase YP_001231073.1 2681910 R 351605 CDS YP_001231074.1 148264368 5165959 complement(2683476..2683865) 1 NC_009483.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 2683865 acpS 5165959 acpS Geobacter uraniireducens Rf4 4'-phosphopantetheinyl transferase YP_001231074.1 2683476 R 351605 CDS YP_001231075.1 148264369 5165960 complement(2684196..2684897) 1 NC_009483.1 PFAM: cyclic nucleotide-binding; regulatory protein, Crp; CRP/FNR family transcriptional regulator 2684897 5165960 Gura_2323 Geobacter uraniireducens Rf4 CRP/FNR family transcriptional regulator YP_001231075.1 2684196 R 351605 CDS YP_001231076.1 148264370 5165685 complement(2685135..2686535) 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 2686535 5165685 Gura_2324 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001231076.1 2685135 R 351605 CDS YP_001231077.1 148264371 5165686 complement(2686557..2688602) 1 NC_009483.1 TIGRFAM: histidine kinase; PFAM: ATP-binding region, ATPase domain protein; integral membrane sensor signal transduction histidine kinase 2688602 5165686 Gura_2325 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001231077.1 2686557 R 351605 CDS YP_001231078.1 148264372 5165687 complement(2688711..2689952) 1 NC_009483.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 2689952 5165687 Gura_2326 Geobacter uraniireducens Rf4 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001231078.1 2688711 R 351605 CDS YP_001231079.1 148264373 5166721 complement(2690399..2691847) 1 NC_009483.1 PFAM: Fibronectin, type III domain protein; fibronectin I domain-containing protein 2691847 5166721 Gura_2327 Geobacter uraniireducens Rf4 fibronectin I domain-containing protein YP_001231079.1 2690399 R 351605 CDS YP_001231080.1 148264374 5166722 complement(2692360..2694387) 1 NC_009483.1 PFAM: Fibronectin, type III domain protein; fibronectin I domain-containing protein 2694387 5166722 Gura_2328 Geobacter uraniireducens Rf4 fibronectin I domain-containing protein YP_001231080.1 2692360 R 351605 CDS YP_001231081.1 148264375 5166723 2694872..2696044 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 2696044 5166723 Gura_2329 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001231081.1 2694872 D 351605 CDS YP_001231082.1 148264376 5166275 2696067..2697197 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 2697197 5166275 Gura_2330 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231082.1 2696067 D 351605 CDS YP_001231083.1 148264377 5166276 2697624..2698574 1 NC_009483.1 hypothetical protein 2698574 5166276 Gura_2331 Geobacter uraniireducens Rf4 hypothetical protein YP_001231083.1 2697624 D 351605 CDS YP_001231084.1 148264378 5166277 2698634..2699458 1 NC_009483.1 hypothetical protein 2699458 5166277 Gura_2332 Geobacter uraniireducens Rf4 hypothetical protein YP_001231084.1 2698634 D 351605 CDS YP_001231085.1 148264379 5165748 complement(2699762..2700745) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 2700745 5165748 Gura_2333 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231085.1 2699762 R 351605 CDS YP_001231086.1 148264380 5165749 complement(2700742..2701872) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 2701872 5165749 Gura_2334 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001231086.1 2700742 R 351605 CDS YP_001231087.1 148264381 5165750 complement(2701914..2703128) 1 NC_009483.1 PFAM: protein of unknown function DUF201; hypothetical protein 2703128 5165750 Gura_2335 Geobacter uraniireducens Rf4 hypothetical protein YP_001231087.1 2701914 R 351605 CDS YP_001231088.1 148264382 5166425 complement(2703140..2704159) 1 NC_009483.1 PFAM: polysaccharide deacetylase; polysaccharide deacetylase 2704159 5166425 Gura_2336 Geobacter uraniireducens Rf4 polysaccharide deacetylase YP_001231088.1 2703140 R 351605 CDS YP_001231089.1 148264383 5166426 complement(2704222..2704698) 1 NC_009483.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; protein tyrosine phosphatase 2704698 5166426 Gura_2337 Geobacter uraniireducens Rf4 protein tyrosine phosphatase YP_001231089.1 2704222 R 351605 CDS YP_001231090.1 148264384 5166427 complement(2704826..2706103) 1 NC_009483.1 PFAM: O-antigen polymerase; O-antigen polymerase 2706103 5166427 Gura_2338 Geobacter uraniireducens Rf4 O-antigen polymerase YP_001231090.1 2704826 R 351605 CDS YP_001231091.1 148264385 5166413 complement(2706130..2707251) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 2707251 5166413 Gura_2339 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001231091.1 2706130 R 351605 CDS YP_001231092.1 148264386 5166414 complement(2707256..2708188) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 2708188 5166414 Gura_2340 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231092.1 2707256 R 351605 CDS YP_001231093.1 148264387 5166415 complement(2708343..2708996) 1 NC_009483.1 hypothetical protein 2708996 5166415 Gura_2341 Geobacter uraniireducens Rf4 hypothetical protein YP_001231093.1 2708343 R 351605 CDS YP_001231094.1 148264388 5166313 complement(2708983..2709816) 1 NC_009483.1 TIGRFAM: eight transmembrane protein EpsH; transmembrane protein EpsH 2709816 5166313 Gura_2342 Geobacter uraniireducens Rf4 transmembrane protein EpsH YP_001231094.1 2708983 R 351605 CDS YP_001231095.1 148264389 5166314 complement(2709839..2711026) 1 NC_009483.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 2711026 5166314 Gura_2343 Geobacter uraniireducens Rf4 DegT/DnrJ/EryC1/StrS aminotransferase YP_001231095.1 2709839 R 351605 CDS YP_001231096.1 148264390 5166315 complement(2711049..2712083) 1 NC_009483.1 hypothetical protein 2712083 5166315 Gura_2344 Geobacter uraniireducens Rf4 hypothetical protein YP_001231096.1 2711049 R 351605 CDS YP_001231097.1 148264391 5166119 complement(2712097..2713068) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 2713068 5166119 Gura_2345 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231097.1 2712097 R 351605 CDS YP_001231098.1 148264392 5166120 complement(2713130..2714236) 1 NC_009483.1 lipopolysaccharide biosynthesis protein-like protein 2714236 5166120 Gura_2346 Geobacter uraniireducens Rf4 lipopolysaccharide biosynthesis protein-like protein YP_001231098.1 2713130 R 351605 CDS YP_001231099.1 148264393 5166121 complement(2714262..2715149) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 2715149 5166121 Gura_2347 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231099.1 2714262 R 351605 CDS YP_001231100.1 148264394 5166010 complement(2715168..2716118) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 2716118 5166010 Gura_2348 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231100.1 2715168 R 351605 CDS YP_001231101.1 148264395 5166011 complement(2716147..2719071) 1 NC_009483.1 hypothetical protein 2719071 5166011 Gura_2349 Geobacter uraniireducens Rf4 hypothetical protein YP_001231101.1 2716147 R 351605 CDS YP_001231102.1 148264396 5166012 complement(2719364..2720635) 1 NC_009483.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; DegT/DnrJ/EryC1/StrS aminotransferase 2720635 5166012 Gura_2350 Geobacter uraniireducens Rf4 DegT/DnrJ/EryC1/StrS aminotransferase YP_001231102.1 2719364 R 351605 CDS YP_001231103.1 148264397 5164763 complement(2720733..2722358) 1 NC_009483.1 TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; amino acid adenylation domain-containing protein 2722358 5164763 Gura_2351 Geobacter uraniireducens Rf4 amino acid adenylation domain-containing protein YP_001231103.1 2720733 R 351605 CDS YP_001231104.1 148264398 5164764 complement(2722379..2723524) 1 NC_009483.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein 2723524 5164764 Gura_2352 Geobacter uraniireducens Rf4 acyl-CoA dehydrogenase domain-containing protein YP_001231104.1 2722379 R 351605 CDS YP_001231105.1 148264399 5164765 complement(2723717..2724742) 1 NC_009483.1 PFAM: Arginase/agmatinase/formiminoglutamase; arginase/agmatinase/formiminoglutamase 2724742 5164765 Gura_2353 Geobacter uraniireducens Rf4 arginase/agmatinase/formiminoglutamase YP_001231105.1 2723717 R 351605 CDS YP_001231106.1 148264400 5163666 complement(2724787..2725044) 1 NC_009483.1 hypothetical protein 2725044 5163666 Gura_2354 Geobacter uraniireducens Rf4 hypothetical protein YP_001231106.1 2724787 R 351605 CDS YP_001231107.1 148264401 5163667 complement(2725079..2725969) 1 NC_009483.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2725969 5163667 Gura_2355 Geobacter uraniireducens Rf4 N-acetyltransferase GCN5 YP_001231107.1 2725079 R 351605 CDS YP_001231108.1 148264402 5163668 complement(2726013..2726741) 1 NC_009483.1 UDP-glucose 4-epimerase 2726741 5163668 Gura_2356 Geobacter uraniireducens Rf4 UDP-glucose 4-epimerase YP_001231108.1 2726013 R 351605 CDS YP_001231109.1 148264403 5163496 complement(2726771..2727664) 1 NC_009483.1 hypothetical protein 2727664 5163496 Gura_2357 Geobacter uraniireducens Rf4 hypothetical protein YP_001231109.1 2726771 R 351605 CDS YP_001231110.1 148264404 5163497 complement(2727734..2728999) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2728999 5163497 Gura_2358 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001231110.1 2727734 R 351605 CDS YP_001231111.1 148264405 5163498 complement(2729183..2730031) 1 NC_009483.1 PFAM: ABC-2 type transporter; ABC-2 type transporter 2730031 5163498 Gura_2359 Geobacter uraniireducens Rf4 ABC-2 type transporter YP_001231111.1 2729183 R 351605 CDS YP_001231112.1 148264406 5162667 complement(2730171..2731052) 1 NC_009483.1 PFAM: polysaccharide deacetylase; polysaccharide deacetylase 2731052 5162667 Gura_2360 Geobacter uraniireducens Rf4 polysaccharide deacetylase YP_001231112.1 2730171 R 351605 CDS YP_001231113.1 148264407 5162668 complement(2731100..2732356) 1 NC_009483.1 hypothetical protein 2732356 5162668 Gura_2361 Geobacter uraniireducens Rf4 hypothetical protein YP_001231113.1 2731100 R 351605 CDS YP_001231114.1 148264408 5162669 complement(2732430..2733602) 1 NC_009483.1 SMART: AAA ATPase; ATPase AAA 2733602 5162669 Gura_2362 Geobacter uraniireducens Rf4 ATPase AAA YP_001231114.1 2732430 R 351605 CDS YP_001231115.1 148264409 5166486 complement(2733710..2734537) 1 NC_009483.1 non-specific protein-tyrosine kinase 2734537 5166486 Gura_2363 Geobacter uraniireducens Rf4 non-specific protein-tyrosine kinase YP_001231115.1 2733710 R 351605 CDS YP_001231116.1 148264410 5166487 complement(2734589..2736112) 1 NC_009483.1 PFAM: lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 2736112 5166487 Gura_2364 Geobacter uraniireducens Rf4 lipopolysaccharide biosynthesis protein YP_001231116.1 2734589 R 351605 CDS YP_001231117.1 148264411 5166488 complement(2736154..2737002) 1 NC_009483.1 PFAM: polysaccharide export protein; polysaccharide export protein 2737002 5166488 Gura_2365 Geobacter uraniireducens Rf4 polysaccharide export protein YP_001231117.1 2736154 R 351605 CDS YP_001231118.1 148264412 5166872 complement(2737017..2738378) 1 NC_009483.1 PFAM: sugar transferase; sugar transferase 2738378 5166872 Gura_2366 Geobacter uraniireducens Rf4 sugar transferase YP_001231118.1 2737017 R 351605 CDS YP_001231119.1 148264413 5166873 complement(2738529..2741111) 1 NC_009483.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 2741111 5166873 Gura_2367 Geobacter uraniireducens Rf4 hypothetical protein YP_001231119.1 2738529 R 351605 CDS YP_001231120.1 148264414 5166874 2741745..2742458 1 NC_009483.1 PFAM: Abortive infection protein; abortive infection protein 2742458 5166874 Gura_2368 Geobacter uraniireducens Rf4 abortive infection protein YP_001231120.1 2741745 D 351605 CDS YP_001231121.1 148264415 5162649 complement(2742536..2742820) 1 NC_009483.1 flagellar protein FhlB-like protein 2742820 5162649 Gura_2369 Geobacter uraniireducens Rf4 flagellar protein FhlB-like protein YP_001231121.1 2742536 R 351605 CDS YP_001231122.1 148264416 5162650 complement(2742804..2743877) 1 NC_009483.1 hypothetical protein 2743877 5162650 Gura_2370 Geobacter uraniireducens Rf4 hypothetical protein YP_001231122.1 2742804 R 351605 CDS YP_001231123.1 148264417 5162651 complement(2743915..2747022) 1 NC_009483.1 PFAM: acriflavin resistance protein; acriflavin resistance protein 2747022 5162651 Gura_2371 Geobacter uraniireducens Rf4 acriflavin resistance protein YP_001231123.1 2743915 R 351605 CDS YP_001231124.1 148264418 5162822 complement(2747084..2748271) 1 NC_009483.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 2748271 5162822 Gura_2372 Geobacter uraniireducens Rf4 RND family efflux transporter MFP subunit YP_001231124.1 2747084 R 351605 CDS YP_001231125.1 148264419 5162823 2748490..2750799 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 2750799 5162823 Gura_2373 Geobacter uraniireducens Rf4 multi-sensor hybrid histidine kinase YP_001231125.1 2748490 D 351605 CDS YP_001231126.1 148264420 5162824 2750811..2751857 1 NC_009483.1 TIGRFAM: metal dependent phophohydrolase; PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; response regulator receiver modulated metal dependent phosphohydrolase 2751857 5162824 Gura_2374 Geobacter uraniireducens Rf4 response regulator receiver modulated metal dependent phosphohydrolase YP_001231126.1 2750811 D 351605 CDS YP_001231127.1 148264421 5162876 complement(2752028..2753479) 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 2753479 5162876 Gura_2375 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001231127.1 2752028 R 351605 CDS YP_001231128.1 148264422 5162877 complement(2753629..2755032) 1 NC_009483.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 2755032 5162877 Gura_2376 Geobacter uraniireducens Rf4 RNA-directed DNA polymerase YP_001231128.1 2753629 R 351605 CDS YP_001231129.1 148264423 5162878 complement(2755562..2755837) 1 NC_009483.1 hypothetical protein 2755837 5162878 Gura_2377 Geobacter uraniireducens Rf4 hypothetical protein YP_001231129.1 2755562 R 351605 CDS YP_001231130.1 148264424 5166605 complement(2755887..2756828) 1 NC_009483.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 2756828 5166605 Gura_2378 Geobacter uraniireducens Rf4 fructose-1,6-bisphosphatase YP_001231130.1 2755887 R 351605 CDS YP_001231131.1 148264425 5166606 2757054..2757473 1 NC_009483.1 PFAM: Rieske [2Fe-2S] domain protein; Rieske (2Fe-2S) domain-containing protein 2757473 5166606 Gura_2379 Geobacter uraniireducens Rf4 Rieske (2Fe-2S) domain-containing protein YP_001231131.1 2757054 D 351605 CDS YP_001231132.1 148264426 5166607 2757487..2758590 1 NC_009483.1 PFAM: Cytochrome b/b6, N-terminal domain; Cytochrome b/b6, C-terminal domain; cytochrome b/b6 domain-containing protein 2758590 5166607 Gura_2380 Geobacter uraniireducens Rf4 cytochrome b/b6 domain-containing protein YP_001231132.1 2757487 D 351605 CDS YP_001231133.1 148264427 5163250 2758587..2759399 1 NC_009483.1 hypothetical protein 2759399 5163250 Gura_2381 Geobacter uraniireducens Rf4 hypothetical protein YP_001231133.1 2758587 D 351605 CDS YP_001231134.1 148264428 5163251 complement(2759472..2760665) 1 NC_009483.1 catalyzes the interconversion of 3-phosphoglycerate and 2-phosphoglycerate; this enzyme does not require the cofactor 2,3-bisphosphoglycerate as a phosphate donor; BPG-independent PGAM; aPGAM; cofactor-independent phosphoglycerate mutase 2760665 5163251 Gura_2382 Geobacter uraniireducens Rf4 cofactor-independent phosphoglycerate mutase YP_001231134.1 2759472 R 351605 CDS YP_001231135.1 148264429 5163252 complement(2760739..2761626) 1 NC_009483.1 TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; tyrosine recombinase XerD 2761626 5163252 Gura_2383 Geobacter uraniireducens Rf4 tyrosine recombinase XerD YP_001231135.1 2760739 R 351605 CDS YP_001231136.1 148264430 5163826 complement(2761623..2764319) 1 NC_009483.1 TIGRFAM: protein-P-II uridylyltransferase; PFAM: amino acid-binding ACT domain protein; DNA polymerase, beta domain protein region; metal-dependent phosphohydrolase, HD sub domain; GlnD PII-uridylyltransferase; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 2764319 5163826 Gura_2384 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001231136.1 2761623 R 351605 CDS YP_001231137.1 148264431 5163827 complement(2764407..2765783) 1 NC_009483.1 PFAM: cell wall hydrolase/autolysin; N-acetylmuramoyl-L-alanine amidase 2765783 5163827 Gura_2385 Geobacter uraniireducens Rf4 N-acetylmuramoyl-L-alanine amidase YP_001231137.1 2764407 R 351605 CDS YP_001231138.1 148264432 5163828 complement(2765789..2768407) 1 NC_009483.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 2768407 5163828 Gura_2386 Geobacter uraniireducens Rf4 DNA mismatch repair protein MutS YP_001231138.1 2765789 R 351605 CDS YP_001231139.1 148264433 5163280 complement(2768539..2770071) 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 2770071 5163280 Gura_2387 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001231139.1 2768539 R 351605 CDS YP_001231140.1 148264434 5163281 complement(2770272..2771930) 1 NC_009483.1 PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; GAF sensor signal transduction histidine kinase 2771930 5163281 Gura_2388 Geobacter uraniireducens Rf4 GAF sensor signal transduction histidine kinase YP_001231140.1 2770272 R 351605 CDS YP_001231141.1 148264435 5163282 complement(2772125..2773273) 1 NC_009483.1 PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2773273 5163282 Gura_2389 Geobacter uraniireducens Rf4 iron-containing alcohol dehydrogenase YP_001231141.1 2772125 R 351605 CDS YP_001231142.1 148264436 5163823 complement(2773300..2774418) 1 NC_009483.1 hypothetical protein 2774418 5163823 Gura_2390 Geobacter uraniireducens Rf4 hypothetical protein YP_001231142.1 2773300 R 351605 CDS YP_001231143.1 148264437 5163824 2775118..2777013 1 NC_009483.1 PFAM: Fibronectin, type III domain protein; fibronectin I domain-containing protein 2777013 5163824 Gura_2391 Geobacter uraniireducens Rf4 fibronectin I domain-containing protein YP_001231143.1 2775118 D 351605 CDS YP_001231144.1 148264438 5163825 2777010..2777678 1 NC_009483.1 hypothetical protein 2777678 5163825 Gura_2392 Geobacter uraniireducens Rf4 hypothetical protein YP_001231144.1 2777010 D 351605 CDS YP_001231145.1 148264439 5163982 2777822..2778079 1 NC_009483.1 hypothetical protein 2778079 5163982 Gura_2393 Geobacter uraniireducens Rf4 hypothetical protein YP_001231145.1 2777822 D 351605 CDS YP_001231146.1 148264440 5163983 2778235..2779410 1 NC_009483.1 PFAM: putative transposase; putative transposase 2779410 5163983 Gura_2394 Geobacter uraniireducens Rf4 putative transposase YP_001231146.1 2778235 D 351605 CDS YP_001231147.1 148264441 5163984 2779733..2780278 1 NC_009483.1 hypothetical protein 2780278 5163984 Gura_2395 Geobacter uraniireducens Rf4 hypothetical protein YP_001231147.1 2779733 D 351605 CDS YP_001231148.1 148264442 5164086 complement(2780244..2781485) 1 NC_009483.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 2781485 5164086 Gura_2396 Geobacter uraniireducens Rf4 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001231148.1 2780244 R 351605 CDS YP_001231149.1 148264443 5164087 2782194..2782445 1 NC_009483.1 TIGRFAM: prevent-host-death family protein; prevent-host-death family protein 2782445 5164087 Gura_2397 Geobacter uraniireducens Rf4 prevent-host-death family protein YP_001231149.1 2782194 D 351605 CDS YP_001231150.1 148264444 5164088 2782429..2782827 1 NC_009483.1 PFAM: PilT protein domain protein; PilT domain-containing protein 2782827 5164088 Gura_2398 Geobacter uraniireducens Rf4 PilT domain-containing protein YP_001231150.1 2782429 D 351605 CDS YP_001231151.1 148264445 5164365 2783055..2784122 1 NC_009483.1 TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; adenosine deaminase 2784122 5164365 Gura_2399 Geobacter uraniireducens Rf4 adenosine deaminase YP_001231151.1 2783055 D 351605 CDS YP_001231152.1 148264446 5164366 2784194..2784436 1 NC_009483.1 hypothetical protein 2784436 5164366 Gura_2400 Geobacter uraniireducens Rf4 hypothetical protein YP_001231152.1 2784194 D 351605 CDS YP_001231153.1 148264447 5164367 complement(2785175..2785357) 1 NC_009483.1 hypothetical protein 2785357 5164367 Gura_2401 Geobacter uraniireducens Rf4 hypothetical protein YP_001231153.1 2785175 R 351605 CDS YP_001231154.1 148264448 5164629 2785856..2786011 1 NC_009483.1 hypothetical protein 2786011 5164629 Gura_2402 Geobacter uraniireducens Rf4 hypothetical protein YP_001231154.1 2785856 D 351605 CDS YP_001231155.1 148264449 5164630 2786173..2786364 1 NC_009483.1 hypothetical protein 2786364 5164630 Gura_2403 Geobacter uraniireducens Rf4 hypothetical protein YP_001231155.1 2786173 D 351605 CDS YP_001231156.1 148264450 5164631 2786697..2787872 1 NC_009483.1 PFAM: transposase, IS4 family protein; transposase, IS4 family protein 2787872 5164631 Gura_2404 Geobacter uraniireducens Rf4 transposase, IS4 family protein YP_001231156.1 2786697 D 351605 CDS YP_001231157.1 148264451 5164659 2787903..2788082 1 NC_009483.1 PFAM: CsbD family protein; CsbD family protein 2788082 5164659 Gura_2405 Geobacter uraniireducens Rf4 CsbD family protein YP_001231157.1 2787903 D 351605 CDS YP_001231158.1 148264452 5164660 2788146..2788649 1 NC_009483.1 hypothetical protein 2788649 5164660 Gura_2406 Geobacter uraniireducens Rf4 hypothetical protein YP_001231158.1 2788146 D 351605 CDS YP_001231159.1 148264453 5164661 complement(2789156..2789470) 1 NC_009483.1 PFAM: transport-associated protein; SMART: transport-associated protein and nodulation region, bacteria; transport-associated protein 2789470 5164661 Gura_2407 Geobacter uraniireducens Rf4 transport-associated protein YP_001231159.1 2789156 R 351605 CDS YP_001231160.1 148264454 5164541 complement(2789684..2790301) 1 NC_009483.1 PFAM: OmpW family protein; OmpW family protein 2790301 5164541 Gura_2408 Geobacter uraniireducens Rf4 OmpW family protein YP_001231160.1 2789684 R 351605 CDS YP_001231161.1 148264455 5164542 complement(2790789..2791616) 1 NC_009483.1 PFAM: molybdopterin binding domain; molybdopterin binding domain-containing protein 2791616 5164542 Gura_2409 Geobacter uraniireducens Rf4 molybdopterin binding domain-containing protein YP_001231161.1 2790789 R 351605 CDS YP_001231162.1 148264456 5164543 complement(2791810..2792088) 1 NC_009483.1 hypothetical protein 2792088 5164543 Gura_2410 Geobacter uraniireducens Rf4 hypothetical protein YP_001231162.1 2791810 R 351605 CDS YP_001231163.1 148264457 5164865 complement(2792108..2793523) 1 NC_009483.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; putative oxidoreductase 2793523 5164865 Gura_2411 Geobacter uraniireducens Rf4 putative oxidoreductase YP_001231163.1 2792108 R 351605 CDS YP_001231164.1 148264458 5164866 complement(2793516..2794370) 1 NC_009483.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin-NADP(+) reductase subunit alpha 2794370 5164866 Gura_2412 Geobacter uraniireducens Rf4 ferredoxin-NADP(+) reductase subunit alpha YP_001231164.1 2793516 R 351605 CDS YP_001231165.1 148264459 5164867 complement(2794529..2795866) 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 2795866 5164867 Gura_2413 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001231165.1 2794529 R 351605 CDS YP_001231166.1 148264460 5162694 complement(2795969..2797927) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 2797927 5162694 Gura_2414 Geobacter uraniireducens Rf4 hypothetical protein YP_001231166.1 2795969 R 351605 CDS YP_001231167.1 148264461 5162695 complement(2798096..2799421) 1 NC_009483.1 PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; electron transfer flavoprotein subunit alpha 2799421 5162695 Gura_2415 Geobacter uraniireducens Rf4 electron transfer flavoprotein subunit alpha YP_001231167.1 2798096 R 351605 CDS YP_001231168.1 148264462 5162696 complement(2799501..2800313) 1 NC_009483.1 PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta 2800313 5162696 Gura_2416 Geobacter uraniireducens Rf4 electron transfer flavoprotein subunit beta YP_001231168.1 2799501 R 351605 CDS YP_001231169.1 148264463 5165032 complement(2800358..2800552) 1 NC_009483.1 hypothetical protein 2800552 5165032 Gura_2417 Geobacter uraniireducens Rf4 hypothetical protein YP_001231169.1 2800358 R 351605 CDS YP_001231170.1 148264464 5165033 complement(2800602..2801033) 1 NC_009483.1 PFAM: MOSC domain containing protein; MOSC domain-containing protein 2801033 5165033 Gura_2418 Geobacter uraniireducens Rf4 MOSC domain-containing protein YP_001231170.1 2800602 R 351605 CDS YP_001231171.1 148264465 5165034 complement(2801127..2802107) 1 NC_009483.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 2802107 5165034 Gura_2419 Geobacter uraniireducens Rf4 molybdenum cofactor biosynthesis protein A YP_001231171.1 2801127 R 351605 CDS YP_001231172.1 148264466 5164945 2802805..2803968 1 NC_009483.1 PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2803968 5164945 Gura_2420 Geobacter uraniireducens Rf4 iron-containing alcohol dehydrogenase YP_001231172.1 2802805 D 351605 CDS YP_001231173.1 148264467 5164946 2804249..2805979 1 NC_009483.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase-like; aldehyde ferredoxin oxidoreductase 2805979 5164946 Gura_2421 Geobacter uraniireducens Rf4 aldehyde ferredoxin oxidoreductase YP_001231173.1 2804249 D 351605 CDS YP_001231174.1 148264468 5164947 2806047..2806271 1 NC_009483.1 PFAM: thiamineS protein; sulfur transfer protein ThiS 2806271 5164947 Gura_2422 Geobacter uraniireducens Rf4 sulfur transfer protein ThiS YP_001231174.1 2806047 D 351605 CDS YP_001231175.1 148264469 5165389 2806273..2807121 1 NC_009483.1 PFAM: UBA/THIF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 2807121 5165389 Gura_2423 Geobacter uraniireducens Rf4 UBA/THIF-type NAD/FAD binding protein YP_001231175.1 2806273 D 351605 CDS YP_001231176.1 148264470 5165390 2807475..2808737 1 NC_009483.1 hypothetical protein 2808737 5165390 Gura_2424 Geobacter uraniireducens Rf4 hypothetical protein YP_001231176.1 2807475 D 351605 CDS YP_001231177.1 148264471 5165391 complement(2808846..2810150) 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 2810150 5165391 Gura_2425 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001231177.1 2808846 R 351605 CDS YP_001231178.1 148264472 5164690 complement(2810407..2812365) 1 NC_009483.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug 2812365 5164690 Gura_2426 Geobacter uraniireducens Rf4 TonB-dependent receptor, plug YP_001231178.1 2810407 R 351605 CDS YP_001231179.1 148264473 5164691 2812397..2813293 1 NC_009483.1 PFAM: protein of unknown function DUF534; hypothetical protein 2813293 5164691 Gura_2427 Geobacter uraniireducens Rf4 hypothetical protein YP_001231179.1 2812397 D 351605 CDS YP_001231180.1 148264474 5164692 2813299..2815269 1 NC_009483.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor hybrid histidine kinase 2815269 5164692 Gura_2428 Geobacter uraniireducens Rf4 integral membrane sensor hybrid histidine kinase YP_001231180.1 2813299 D 351605 CDS YP_001231181.1 148264475 5165397 complement(2815505..2815771) 1 NC_009483.1 hypothetical protein 2815771 5165397 Gura_2429 Geobacter uraniireducens Rf4 hypothetical protein YP_001231181.1 2815505 R 351605 CDS YP_001231182.1 148264476 5165398 complement(2815969..2817972) 1 NC_009483.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; 1A family penicillin-binding protein 2817972 5165398 Gura_2430 Geobacter uraniireducens Rf4 1A family penicillin-binding protein YP_001231182.1 2815969 R 351605 CDS YP_001231183.1 148264477 5165399 complement(2818161..2818409) 1 NC_009483.1 TIGRFAM: putative regulatory protein, FmdB family; FmdB family regulatory protein 2818409 5165399 Gura_2431 Geobacter uraniireducens Rf4 FmdB family regulatory protein YP_001231183.1 2818161 R 351605 CDS YP_001231184.1 148264478 5165256 complement(2818472..2819371) 1 NC_009483.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 2819371 5165256 Gura_2432 Geobacter uraniireducens Rf4 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001231184.1 2818472 R 351605 CDS YP_001231185.1 148264479 5165257 complement(2819731..2820219) 1 NC_009483.1 hypothetical protein 2820219 5165257 Gura_2433 Geobacter uraniireducens Rf4 hypothetical protein YP_001231185.1 2819731 R 351605 CDS YP_001231186.1 148264480 5165258 complement(2820216..2820617) 1 NC_009483.1 hypothetical protein 2820617 5165258 Gura_2434 Geobacter uraniireducens Rf4 hypothetical protein YP_001231186.1 2820216 R 351605 CDS YP_001231187.1 148264481 5164957 complement(2820698..2821609) 1 NC_009483.1 PFAM: nitroreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; nitroreductase 2821609 5164957 Gura_2435 Geobacter uraniireducens Rf4 nitroreductase YP_001231187.1 2820698 R 351605 CDS YP_001231188.1 148264482 5164958 2822059..2822718 1 NC_009483.1 hypothetical protein 2822718 5164958 Gura_2436 Geobacter uraniireducens Rf4 hypothetical protein YP_001231188.1 2822059 D 351605 CDS YP_001231189.1 148264483 5164959 2822715..2823410 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2823410 5164959 Gura_2437 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001231189.1 2822715 D 351605 CDS YP_001231190.1 148264484 5165001 2823407..2824627 1 NC_009483.1 PFAM: protein of unknown function DUF214; hypothetical protein 2824627 5165001 Gura_2438 Geobacter uraniireducens Rf4 hypothetical protein YP_001231190.1 2823407 D 351605 CDS YP_001231191.1 148264485 5165002 2824620..2825354 1 NC_009483.1 hypothetical protein 2825354 5165002 Gura_2439 Geobacter uraniireducens Rf4 hypothetical protein YP_001231191.1 2824620 D 351605 CDS YP_001231192.1 148264486 5165003 2825429..2825818 1 NC_009483.1 hypothetical protein 2825818 5165003 Gura_2440 Geobacter uraniireducens Rf4 hypothetical protein YP_001231192.1 2825429 D 351605 CDS YP_001231193.1 148264487 5165887 2825819..2826580 1 NC_009483.1 hypothetical protein 2826580 5165887 Gura_2441 Geobacter uraniireducens Rf4 hypothetical protein YP_001231193.1 2825819 D 351605 CDS YP_001231194.1 148264488 5165888 2826674..2827777 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase internal region; signal transduction histidine kinase LytS 2827777 5165888 Gura_2442 Geobacter uraniireducens Rf4 signal transduction histidine kinase LytS YP_001231194.1 2826674 D 351605 CDS YP_001231195.1 148264489 5165889 2827770..2828609 1 NC_009483.1 PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator 2828609 5165889 Gura_2443 Geobacter uraniireducens Rf4 LytTR family two component transcriptional regulator YP_001231195.1 2827770 D 351605 CDS YP_001231196.1 148264490 5165955 complement(2829243..2830085) 1 NC_009483.1 PFAM: putative RNA methylase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 2830085 5165955 Gura_2444 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001231196.1 2829243 R 351605 CDS YP_001231197.1 148264491 5165956 complement(2830165..2830518) 1 NC_009483.1 PFAM: regulatory protein, ArsR; regulatory protein ArsR 2830518 5165956 Gura_2445 Geobacter uraniireducens Rf4 regulatory protein ArsR YP_001231197.1 2830165 R 351605 CDS YP_001231198.1 148264492 5165957 complement(2830587..2831441) 1 NC_009483.1 PEP phosphonomutase-like protein 2831441 5165957 Gura_2446 Geobacter uraniireducens Rf4 PEP phosphonomutase-like protein YP_001231198.1 2830587 R 351605 CDS YP_001231199.1 148264493 5165336 complement(2831700..2832449) 1 NC_009483.1 hypothetical protein 2832449 5165336 Gura_2447 Geobacter uraniireducens Rf4 hypothetical protein YP_001231199.1 2831700 R 351605 CDS YP_001231200.1 148264494 5165337 complement(2832451..2833662) 1 NC_009483.1 PFAM: major facilitator superfamily MFS_1; major facilitator transporter 2833662 5165337 Gura_2448 Geobacter uraniireducens Rf4 major facilitator transporter YP_001231200.1 2832451 R 351605 CDS YP_001231201.1 148264495 5165338 complement(2833679..2833948) 1 NC_009483.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; alkylhydroperoxidase 2833948 5165338 Gura_2449 Geobacter uraniireducens Rf4 alkylhydroperoxidase YP_001231201.1 2833679 R 351605 CDS YP_001231202.1 148264496 5165816 2834172..2835581 1 NC_009483.1 PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; GntR family transcriptional regulator 2835581 5165816 Gura_2450 Geobacter uraniireducens Rf4 GntR family transcriptional regulator YP_001231202.1 2834172 D 351605 CDS YP_001231203.1 148264497 5165817 complement(2835704..2836927) 1 NC_009483.1 PFAM: SufBD protein; SufBD protein 2836927 5165817 Gura_2451 Geobacter uraniireducens Rf4 SufBD protein YP_001231203.1 2835704 R 351605 CDS YP_001231204.1 148264498 5165818 complement(2836915..2837655) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2837655 5165818 Gura_2452 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001231204.1 2836915 R 351605 CDS YP_001231205.1 148264499 5165565 complement(2837765..2838412) 1 NC_009483.1 secreted protein-like protein 2838412 5165565 Gura_2453 Geobacter uraniireducens Rf4 secreted protein-like protein YP_001231205.1 2837765 R 351605 CDS YP_001231206.1 148264500 5165566 2838750..2839589 1 NC_009483.1 PFAM: MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase 2839589 5165566 Gura_2454 Geobacter uraniireducens Rf4 protein-glutamate O-methyltransferase YP_001231206.1 2838750 D 351605 CDS YP_001231207.1 148264501 5165567 complement(2839632..2840009) 1 NC_009483.1 PFAM: PilT protein domain protein; PilT domain-containing protein 2840009 5165567 Gura_2455 Geobacter uraniireducens Rf4 PilT domain-containing protein YP_001231207.1 2839632 R 351605 CDS YP_001231208.1 148264502 5166718 complement(2840006..2840245) 1 NC_009483.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein 2840245 5166718 Gura_2456 Geobacter uraniireducens Rf4 prevent-host-death family protein YP_001231208.1 2840006 R 351605 CDS YP_001231209.1 148264503 5166719 complement(2840478..2840915) 1 NC_009483.1 hypothetical protein 2840915 5166719 Gura_2457 Geobacter uraniireducens Rf4 hypothetical protein YP_001231209.1 2840478 R 351605 CDS YP_001231210.1 148264504 5166720 complement(2841126..2841359) 1 NC_009483.1 hypothetical protein 2841359 5166720 Gura_2458 Geobacter uraniireducens Rf4 hypothetical protein YP_001231210.1 2841126 R 351605 CDS YP_001231211.1 148264505 5166528 complement(2841641..2842906) 1 NC_009483.1 PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 2842906 5166528 Gura_2459 Geobacter uraniireducens Rf4 beta-lactamase domain-containing protein YP_001231211.1 2841641 R 351605 CDS YP_001231212.1 148264506 5166529 2843479..2843643 1 NC_009483.1 hypothetical protein 2843643 5166529 Gura_2460 Geobacter uraniireducens Rf4 hypothetical protein YP_001231212.1 2843479 D 351605 CDS YP_001231213.1 148264507 5166530 complement(2843693..2844868) 1 NC_009483.1 PFAM: transposase, IS4 family protein; transposase, IS4 family protein 2844868 5166530 Gura_2461 Geobacter uraniireducens Rf4 transposase, IS4 family protein YP_001231213.1 2843693 R 351605 CDS YP_001231214.1 148264508 5166266 complement(2845295..2846530) 1 NC_009483.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 2846530 5166266 Gura_2462 Geobacter uraniireducens Rf4 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001231214.1 2845295 R 351605 CDS YP_001231215.1 148264509 5166267 complement(2847118..2847960) 1 NC_009483.1 hypothetical protein 2847960 5166267 Gura_2463 Geobacter uraniireducens Rf4 hypothetical protein YP_001231215.1 2847118 R 351605 CDS YP_001231216.1 148264510 5166268 join(2848592..2848948,2848947..2849762) 1 NC_009483.1 hypothetical protein 2849762 5166268 Gura_2464 Geobacter uraniireducens Rf4 hypothetical protein YP_001231216.1 2848592 D 351605 CDS YP_001231217.1 148264511 5163049 2850022..2851848 1 NC_009483.1 hypothetical protein 2851848 5163049 Gura_2465 Geobacter uraniireducens Rf4 hypothetical protein YP_001231217.1 2850022 D 351605 CDS YP_001231218.1 148264512 5163050 complement(2851978..2852163) 1 NC_009483.1 PFAM: 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 2852163 5163050 Gura_2466 Geobacter uraniireducens Rf4 4-oxalocrotonate tautomerase YP_001231218.1 2851978 R 351605 CDS YP_001231219.1 148264513 5163051 complement(2852242..2852934) 1 NC_009483.1 hypothetical protein 2852934 5163051 Gura_2467 Geobacter uraniireducens Rf4 hypothetical protein YP_001231219.1 2852242 R 351605 CDS YP_001231220.1 148264514 5163067 complement(2852934..2853347) 1 NC_009483.1 hypothetical protein 2853347 5163067 Gura_2468 Geobacter uraniireducens Rf4 hypothetical protein YP_001231220.1 2852934 R 351605 CDS YP_001231221.1 148264515 5163068 complement(2853699..2854061) 1 NC_009483.1 PFAM: HEPN domain protein; HEPN domain-containing protein 2854061 5163068 Gura_2469 Geobacter uraniireducens Rf4 HEPN domain-containing protein YP_001231221.1 2853699 R 351605 CDS YP_001231222.1 148264516 5163069 complement(2854069..2854386) 1 NC_009483.1 PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 2854386 5163069 Gura_2470 Geobacter uraniireducens Rf4 DNA polymerase subunit beta YP_001231222.1 2854069 R 351605 CDS YP_001231223.1 148264517 5163515 complement(2855211..2856344) 1 NC_009483.1 PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; class V aminotransferase 2856344 5163515 Gura_2472 Geobacter uraniireducens Rf4 class V aminotransferase YP_001231223.1 2855211 R 351605 CDS YP_001231224.1 148264518 5163516 2856477..2857553 1 NC_009483.1 hypothetical protein 2857553 5163516 Gura_2473 Geobacter uraniireducens Rf4 hypothetical protein YP_001231224.1 2856477 D 351605 CDS YP_001231225.1 148264519 5163868 2857578..2859233 1 NC_009483.1 hypothetical protein 2859233 5163868 Gura_2474 Geobacter uraniireducens Rf4 hypothetical protein YP_001231225.1 2857578 D 351605 CDS YP_001231226.1 148264520 5163869 2859230..2861206 1 NC_009483.1 hypothetical protein 2861206 5163869 Gura_2475 Geobacter uraniireducens Rf4 hypothetical protein YP_001231226.1 2859230 D 351605 CDS YP_001231227.1 148264521 5163870 2861203..2861601 1 NC_009483.1 hypothetical protein 2861601 5163870 Gura_2476 Geobacter uraniireducens Rf4 hypothetical protein YP_001231227.1 2861203 D 351605 CDS YP_001231228.1 148264522 5162918 complement(join(2862085..2862900,2862899..2863255)) 1 NC_009483.1 hypothetical protein 2863255 5162918 Gura_2477 Geobacter uraniireducens Rf4 hypothetical protein YP_001231228.1 2862085 R 351605 CDS YP_001231229.1 148264523 5162919 complement(2863433..2865133) 1 NC_009483.1 hypothetical protein 2865133 5162919 Gura_2478 Geobacter uraniireducens Rf4 hypothetical protein YP_001231229.1 2863433 R 351605 CDS YP_001231230.1 148264524 5162920 complement(2865152..2865877) 1 NC_009483.1 hypothetical protein 2865877 5162920 Gura_2479 Geobacter uraniireducens Rf4 hypothetical protein YP_001231230.1 2865152 R 351605 CDS YP_001231231.1 148264525 5164181 complement(2865874..2867973) 1 NC_009483.1 PFAM: SMC domain protein; SMC domain-containing protein 2867973 5164181 Gura_2480 Geobacter uraniireducens Rf4 SMC domain-containing protein YP_001231231.1 2865874 R 351605 CDS YP_001231232.1 148264526 5164182 complement(2868165..2870285) 1 NC_009483.1 PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; type III restriction enzyme, res subunit 2870285 5164182 Gura_2481 Geobacter uraniireducens Rf4 type III restriction enzyme, res subunit YP_001231232.1 2868165 R 351605 CDS YP_001231233.1 148264527 5164183 complement(2870880..2871296) 1 NC_009483.1 PFAM: NUDIX hydrolase; NUDIX hydrolase 2871296 5164183 Gura_2482 Geobacter uraniireducens Rf4 NUDIX hydrolase YP_001231233.1 2870880 R 351605 CDS YP_001231234.1 148264528 5164846 complement(2872062..2874089) 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2874089 5164846 Gura_2483 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001231234.1 2872062 R 351605 CDS YP_001231235.1 148264529 5165133 complement(2874102..2874911) 1 NC_009483.1 PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein 2874911 5165133 Gura_2484 Geobacter uraniireducens Rf4 extracellular solute-binding protein YP_001231235.1 2874102 R 351605 CDS YP_001231236.1 148264530 5165134 complement(2875037..2875630) 1 NC_009483.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2875630 5165134 Gura_2485 Geobacter uraniireducens Rf4 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001231236.1 2875037 R 351605 CDS YP_001231237.1 148264531 5165135 complement(2875646..2876242) 1 NC_009483.1 PFAM: Lytic transglycosylase, catalytic; lytic transglycosylase 2876242 5165135 Gura_2486 Geobacter uraniireducens Rf4 lytic transglycosylase YP_001231237.1 2875646 R 351605 CDS YP_001231238.1 148264532 5162757 2876440..2878035 1 NC_009483.1 TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; L-aspartate oxidase 2878035 5162757 Gura_2487 Geobacter uraniireducens Rf4 L-aspartate oxidase YP_001231238.1 2876440 D 351605 CDS YP_001231239.1 148264533 5162758 2878072..2878347 1 NC_009483.1 PFAM: Chorismate mutase; chorismate mutase 2878347 5162758 Gura_2488 Geobacter uraniireducens Rf4 chorismate mutase YP_001231239.1 2878072 D 351605 CDS YP_001231240.1 148264534 5162759 2878370..2878579 1 NC_009483.1 hypothetical protein 2878579 5162759 Gura_2489 Geobacter uraniireducens Rf4 hypothetical protein YP_001231240.1 2878370 D 351605 CDS YP_001231241.1 148264535 5165864 complement(2878897..2879643) 1 NC_009483.1 PFAM: glutamate synthase, alpha subunit domain protein; glutamate synthase subunit alpha 2879643 5165864 Gura_2490 Geobacter uraniireducens Rf4 glutamate synthase subunit alpha YP_001231241.1 2878897 R 351605 CDS YP_001231242.1 148264536 5165865 complement(2879737..2880852) 1 NC_009483.1 PFAM: glutamine amidotransferase, class-II; glutamine amidotransferase, class-II 2880852 5165865 Gura_2491 Geobacter uraniireducens Rf4 glutamine amidotransferase, class-II YP_001231242.1 2879737 R 351605 CDS YP_001231243.1 148264537 5165866 complement(2880955..2882232) 1 NC_009483.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2882232 5165866 Gura_2492 Geobacter uraniireducens Rf4 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001231243.1 2880955 R 351605 CDS YP_001231244.1 148264538 5164744 complement(2882229..2882678) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 2882678 5164744 Gura_2493 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001231244.1 2882229 R 351605 CDS YP_001231245.1 148264539 5164745 complement(2882772..2884301) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase 2884301 5164745 Gura_2494 Geobacter uraniireducens Rf4 glutamate synthase YP_001231245.1 2882772 R 351605 CDS YP_001231246.1 148264540 5164746 2884680..2884994 1 NC_009483.1 PFAM: protein of unknown function UPF0044; hypothetical protein 2884994 5164746 Gura_2495 Geobacter uraniireducens Rf4 hypothetical protein YP_001231246.1 2884680 D 351605 CDS YP_001231247.1 148264541 5164977 complement(2885066..2885632) 1 NC_009483.1 hypothetical protein 2885632 5164977 Gura_2496 Geobacter uraniireducens Rf4 hypothetical protein YP_001231247.1 2885066 R 351605 CDS YP_001231248.1 148264542 5164978 2885940..2886140 1 NC_009483.1 hypothetical protein 2886140 5164978 Gura_2497 Geobacter uraniireducens Rf4 hypothetical protein YP_001231248.1 2885940 D 351605 CDS YP_001231249.1 148264543 5164979 complement(2886252..2887403) 1 NC_009483.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 2887403 5164979 Gura_2498 Geobacter uraniireducens Rf4 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_001231249.1 2886252 R 351605 CDS YP_001231250.1 148264544 5166103 2887558..2888181 1 NC_009483.1 TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; putative methyltransferase 2888181 5166103 Gura_2499 Geobacter uraniireducens Rf4 putative methyltransferase YP_001231250.1 2887558 D 351605 CDS YP_001231251.1 148264545 5166104 2888184..2888672 1 NC_009483.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 2888672 coaD 5166104 coaD Geobacter uraniireducens Rf4 phosphopantetheine adenylyltransferase YP_001231251.1 2888184 D 351605 CDS YP_001231252.1 148264546 5166105 2888714..2889907 1 NC_009483.1 PFAM: aminotransferase, class I and II; class I and II aminotransferase 2889907 5166105 Gura_2501 Geobacter uraniireducens Rf4 class I and II aminotransferase YP_001231252.1 2888714 D 351605 CDS YP_001231253.1 148264547 5163274 2890001..2890195 1 NC_009483.1 hypothetical protein 2890195 5163274 Gura_2502 Geobacter uraniireducens Rf4 hypothetical protein YP_001231253.1 2890001 D 351605 CDS YP_001231254.1 148264548 5163275 2890321..2892120 1 NC_009483.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 2892120 5163275 Gura_2503 Geobacter uraniireducens Rf4 GTP-binding protein LepA YP_001231254.1 2890321 D 351605 CDS YP_001231255.1 148264549 5163276 2892173..2892832 1 NC_009483.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; signal peptidase I 2892832 5163276 Gura_2504 Geobacter uraniireducens Rf4 signal peptidase I YP_001231255.1 2892173 D 351605 CDS YP_001231256.1 148264550 5165485 complement(2892917..2893636) 1 NC_009483.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; pseudouridine synthase 2893636 5165485 Gura_2505 Geobacter uraniireducens Rf4 pseudouridine synthase YP_001231256.1 2892917 R 351605 CDS YP_001231257.1 148264551 5165486 complement(2893730..2894686) 1 NC_009483.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 2894686 5165486 Gura_2506 Geobacter uraniireducens Rf4 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_001231257.1 2893730 R 351605 CDS YP_001231258.1 148264552 5165487 complement(2894741..2898214) 1 NC_009483.1 TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 2898214 5165487 Gura_2507 Geobacter uraniireducens Rf4 DNA polymerase III subunit alpha YP_001231258.1 2894741 R 351605 CDS YP_001231259.1 148264553 5163481 2898432..2899043 1 NC_009483.1 stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA 2899043 5163481 Gura_2508 Geobacter uraniireducens Rf4 TrpR binding protein WrbA YP_001231259.1 2898432 D 351605 CDS YP_001231260.1 148264554 5163482 complement(2899141..2900097) 1 NC_009483.1 hypothetical protein 2900097 5163482 Gura_2509 Geobacter uraniireducens Rf4 hypothetical protein YP_001231260.1 2899141 R 351605 CDS YP_001231261.1 148264555 5163483 2900348..2901736 1 NC_009483.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; Radical SAM domain protein; TatD family hydrolase 2901736 5163483 Gura_2510 Geobacter uraniireducens Rf4 TatD family hydrolase YP_001231261.1 2900348 D 351605 CDS YP_001231262.1 148264556 5164032 complement(2901815..2901985) 1 NC_009483.1 hypothetical protein 2901985 5164032 Gura_2511 Geobacter uraniireducens Rf4 hypothetical protein YP_001231262.1 2901815 R 351605 CDS YP_001231263.1 148264557 5164033 complement(2902045..2902371) 1 NC_009483.1 hypothetical protein 2902371 5164033 Gura_2512 Geobacter uraniireducens Rf4 hypothetical protein YP_001231263.1 2902045 R 351605 CDS YP_001231264.1 148264558 5164034 2902592..2902972 1 NC_009483.1 TIGRFAM: desulfoferrodoxin; PFAM: Desulfoferrodoxin, ferrous iron-binding region; Desulfoferrodoxin Dfx domain protein; desulfoferrodoxin 2902972 5164034 Gura_2513 Geobacter uraniireducens Rf4 desulfoferrodoxin YP_001231264.1 2902592 D 351605 CDS YP_001231265.1 148264559 5164797 2903008..2903862 1 NC_009483.1 PFAM: cytochrome c assembly protein; cytochrome c assembly protein 2903862 5164797 Gura_2514 Geobacter uraniireducens Rf4 cytochrome c assembly protein YP_001231265.1 2903008 D 351605 CDS YP_001231266.1 148264560 5164798 complement(2904021..2904500) 1 NC_009483.1 hypothetical protein 2904500 5164798 Gura_2515 Geobacter uraniireducens Rf4 hypothetical protein YP_001231266.1 2904021 R 351605 CDS YP_001231267.1 148264561 5164799 complement(2904691..2905755) 1 NC_009483.1 PFAM: major facilitator superfamily MFS_1; major facilitator transporter 2905755 5164799 Gura_2516 Geobacter uraniireducens Rf4 major facilitator transporter YP_001231267.1 2904691 R 351605 CDS YP_001231268.1 148264562 5164995 complement(2905931..2906245) 1 NC_009483.1 hypothetical protein 2906245 5164995 Gura_2517 Geobacter uraniireducens Rf4 hypothetical protein YP_001231268.1 2905931 R 351605 CDS YP_001231269.1 148264563 5164996 complement(2906242..2906592) 1 NC_009483.1 PFAM: Carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 2906592 5164996 Gura_2518 Geobacter uraniireducens Rf4 carboxymuconolactone decarboxylase YP_001231269.1 2906242 R 351605 CDS YP_001231270.1 148264564 5164997 complement(2906632..2907780) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF362; hypothetical protein 2907780 5164997 Gura_2519 Geobacter uraniireducens Rf4 hypothetical protein YP_001231270.1 2906632 R 351605 CDS YP_001231271.1 148264565 5165855 complement(2907801..2909210) 1 NC_009483.1 TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; UbiD family decarboxylase 2909210 5165855 Gura_2520 Geobacter uraniireducens Rf4 UbiD family decarboxylase YP_001231271.1 2907801 R 351605 CDS YP_001231272.1 148264566 5165856 complement(2909219..2909911) 1 NC_009483.1 PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 2909911 5165856 Gura_2521 Geobacter uraniireducens Rf4 NADPH-dependent FMN reductase YP_001231272.1 2909219 R 351605 CDS YP_001231273.1 148264567 5165857 complement(2909908..2910753) 1 NC_009483.1 PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 2910753 5165857 Gura_2522 Geobacter uraniireducens Rf4 xylose isomerase domain-containing protein YP_001231273.1 2909908 R 351605 CDS YP_001231274.1 148264568 5164936 complement(2910750..2912168) 1 NC_009483.1 PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 2912168 5164936 Gura_2523 Geobacter uraniireducens Rf4 AMP-dependent synthetase and ligase YP_001231274.1 2910750 R 351605 CDS YP_001231275.1 148264569 5164937 complement(2912122..2912985) 1 NC_009483.1 PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 2912985 5164937 Gura_2524 Geobacter uraniireducens Rf4 xylose isomerase domain-containing protein YP_001231275.1 2912122 R 351605 CDS YP_001231276.1 148264570 5164938 complement(2912985..2913233) 1 NC_009483.1 hypothetical protein 2913233 5164938 Gura_2525 Geobacter uraniireducens Rf4 hypothetical protein YP_001231276.1 2912985 R 351605 CDS YP_001231277.1 148264571 5166814 complement(2913230..2914336) 1 NC_009483.1 PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase 2914336 5166814 Gura_2526 Geobacter uraniireducens Rf4 beta-ketoacyl synthase YP_001231277.1 2913230 R 351605 CDS YP_001231278.1 148264572 5166815 complement(2914464..2915675) 1 NC_009483.1 PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase 2915675 5166815 Gura_2527 Geobacter uraniireducens Rf4 beta-ketoacyl synthase YP_001231278.1 2914464 R 351605 CDS YP_001231279.1 148264573 5166816 complement(2915662..2916390) 1 NC_009483.1 hypothetical protein 2916390 5166816 Gura_2528 Geobacter uraniireducens Rf4 hypothetical protein YP_001231279.1 2915662 R 351605 CDS YP_001231280.1 148264574 5165661 complement(2916466..2917770) 1 NC_009483.1 catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta 2917770 5165661 Gura_2529 Geobacter uraniireducens Rf4 tryptophan synthase subunit beta YP_001231280.1 2916466 R 351605 CDS YP_001231281.1 148264575 5165662 complement(2917763..2918971) 1 NC_009483.1 PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase, GAPDH domain protein; inositol-3-phosphate synthase 2918971 5165662 Gura_2530 Geobacter uraniireducens Rf4 inositol-3-phosphate synthase YP_001231281.1 2917763 R 351605 CDS YP_001231282.1 148264576 5165663 complement(2919000..2920025) 1 NC_009483.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 2920025 5165663 Gura_2531 Geobacter uraniireducens Rf4 alcohol dehydrogenase YP_001231282.1 2919000 R 351605 CDS YP_001231283.1 148264577 5163460 complement(2920019..2921326) 1 NC_009483.1 catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta 2921326 5163460 Gura_2532 Geobacter uraniireducens Rf4 tryptophan synthase subunit beta YP_001231283.1 2920019 R 351605 CDS YP_001231284.1 148264578 5163461 complement(2921351..2922208) 1 NC_009483.1 PFAM: protein of unknown function DUF169; hypothetical protein 2922208 5163461 Gura_2533 Geobacter uraniireducens Rf4 hypothetical protein YP_001231284.1 2921351 R 351605 CDS YP_001231285.1 148264579 5163462 complement(2922228..2922686) 1 NC_009483.1 PFAM: regulatory protein, MarR; MarR family transcriptional regulator 2922686 5163462 Gura_2534 Geobacter uraniireducens Rf4 MarR family transcriptional regulator YP_001231285.1 2922228 R 351605 CDS YP_001231286.1 148264580 5166693 join(2922920..2923276,2923275..2924090) 1 NC_009483.1 hypothetical protein 2924090 5166693 Gura_2535 Geobacter uraniireducens Rf4 hypothetical protein YP_001231286.1 2922920 D 351605 CDS YP_001231287.1 148264581 5166694 2924475..2925719 1 NC_009483.1 PFAM: major facilitator superfamily MFS_1; major facilitator transporter 2925719 5166694 Gura_2536 Geobacter uraniireducens Rf4 major facilitator transporter YP_001231287.1 2924475 D 351605 CDS YP_001231288.1 148264582 5166695 complement(2926195..2927208) 1 NC_009483.1 PFAM: transglutaminase domain protein; transglutaminase domain-containing protein 2927208 5166695 Gura_2537 Geobacter uraniireducens Rf4 transglutaminase domain-containing protein YP_001231288.1 2926195 R 351605 CDS YP_001231289.1 148264583 5166022 complement(2927234..2927992) 1 NC_009483.1 PFAM: Rhodanese domain protein; rhodanese domain-containing protein 2927992 5166022 Gura_2538 Geobacter uraniireducens Rf4 rhodanese domain-containing protein YP_001231289.1 2927234 R 351605 CDS YP_001231290.1 148264584 5166023 2928112..2929014 1 NC_009483.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator 2929014 5166023 Gura_2539 Geobacter uraniireducens Rf4 LysR family transcriptional regulator YP_001231290.1 2928112 D 351605 CDS YP_001231291.1 148264585 5166024 complement(2929301..2929627) 1 NC_009483.1 PFAM: Class I peptide chain release factor; class I peptide chain release factor 2929627 5166024 Gura_2540 Geobacter uraniireducens Rf4 class I peptide chain release factor YP_001231291.1 2929301 R 351605 CDS YP_001231292.1 148264586 5166419 2929724..2930266 1 NC_009483.1 TIGRFAM: metal dependent phophohydrolase; metal dependent phophohydrolase 2930266 5166419 Gura_2541 Geobacter uraniireducens Rf4 metal dependent phophohydrolase YP_001231292.1 2929724 D 351605 CDS YP_001231293.1 148264587 5166420 2930502..2932415 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; protein phosphatase 2C domain protein; putative PAS/PAC sensor protein 2932415 5166420 Gura_2542 Geobacter uraniireducens Rf4 putative PAS/PAC sensor protein YP_001231293.1 2930502 D 351605 CDS YP_001231294.1 148264588 5166421 2932599..2933690 1 NC_009483.1 phosphotransacetylase domain-containing protein 2933690 5166421 Gura_2543 Geobacter uraniireducens Rf4 phosphotransacetylase domain-containing protein YP_001231294.1 2932599 D 351605 CDS YP_001231295.1 148264589 5167081 complement(2933702..2936344) 1 NC_009483.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; P-type HAD superfamily ATPase 2936344 5167081 Gura_2544 Geobacter uraniireducens Rf4 P-type HAD superfamily ATPase YP_001231295.1 2933702 R 351605 CDS YP_001231296.1 148264590 5167082 2936460..2937686 1 NC_009483.1 hypothetical protein 2937686 5167082 Gura_2545 Geobacter uraniireducens Rf4 hypothetical protein YP_001231296.1 2936460 D 351605 CDS YP_001231297.1 148264591 5167083 complement(2937710..2938417) 1 NC_009483.1 protein-disulfide isomerase-like protein 2938417 5167083 Gura_2546 Geobacter uraniireducens Rf4 protein-disulfide isomerase-like protein YP_001231297.1 2937710 R 351605 CDS YP_001231298.1 148264592 5166890 2938875..2941097 1 NC_009483.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2941097 5166890 Gura_2547 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001231298.1 2938875 D 351605 CDS YP_001231299.1 148264593 5166891 2941135..2941581 1 NC_009483.1 hypothetical protein 2941581 5166891 Gura_2548 Geobacter uraniireducens Rf4 hypothetical protein YP_001231299.1 2941135 D 351605 CDS YP_001231300.1 148264594 5166892 2941600..2942250 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 2942250 5166892 Gura_2549 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001231300.1 2941600 D 351605 CDS YP_001231301.1 148264595 5164029 2942901..2953697 1 NC_009483.1 TIGRFAM: putative outer membrane adhesin like protein; PFAM: Hemolysin-type calcium-binding region; Ig family protein; Haemolysin-type calcium binding domain protein; SMART: Dystroglycan-type cadherin domain protein; putative outer membrane adhesin like protein 2953697 5164029 Gura_2550 Geobacter uraniireducens Rf4 putative outer membrane adhesin like protein YP_001231301.1 2942901 D 351605 CDS YP_001231302.1 148264596 5164030 2953821..2955050 1 NC_009483.1 UDP-glucuronosyltransferase-like protein 2955050 5164030 Gura_2551 Geobacter uraniireducens Rf4 UDP-glucuronosyltransferase-like protein YP_001231302.1 2953821 D 351605 CDS YP_001231303.1 148264597 5164031 2955047..2956465 1 NC_009483.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; HlyD family type I secretion membrane fusion protein 2956465 5164031 Gura_2552 Geobacter uraniireducens Rf4 HlyD family type I secretion membrane fusion protein YP_001231303.1 2955047 D 351605 CDS YP_001231304.1 148264598 5162640 complement(2957218..2958282) 1 NC_009483.1 PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2958282 5162640 Gura_2553 Geobacter uraniireducens Rf4 alpha/beta hydrolase fold protein YP_001231304.1 2957218 R 351605 CDS YP_001231305.1 148264599 5163426 complement(2958551..2958871) 1 NC_009483.1 hypothetical protein 2958871 5163426 Gura_2554 Geobacter uraniireducens Rf4 hypothetical protein YP_001231305.1 2958551 R 351605 CDS YP_001231306.1 148264600 5163427 complement(2958938..2960152) 1 NC_009483.1 PFAM: transposase, mutator type; transposase, mutator type 2960152 5163427 Gura_2555 Geobacter uraniireducens Rf4 transposase, mutator type YP_001231306.1 2958938 R 351605 CDS YP_001231307.1 148264601 5163428 2960683..2961360 1 NC_009483.1 PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 2961360 5163428 Gura_2556 Geobacter uraniireducens Rf4 two component transcriptional regulator YP_001231307.1 2960683 D 351605 CDS YP_001231308.1 148264602 5162855 2961387..2961671 1 NC_009483.1 hypothetical protein 2961671 5162855 Gura_2557 Geobacter uraniireducens Rf4 hypothetical protein YP_001231308.1 2961387 D 351605 CDS YP_001231309.1 148264603 5162856 2961724..2962752 1 NC_009483.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein, family 1; phosphate ABC transporter periplasmic phosphate-binding protein 2962752 5162856 Gura_2558 Geobacter uraniireducens Rf4 phosphate ABC transporter periplasmic phosphate-binding protein YP_001231309.1 2961724 D 351605 CDS YP_001231310.1 148264604 5162857 2962862..2963836 1 NC_009483.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 2963836 5162857 Gura_2559 Geobacter uraniireducens Rf4 phosphate ABC transporter permease YP_001231310.1 2962862 D 351605 CDS YP_001231311.1 148264605 5163451 2963833..2964675 1 NC_009483.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter inner membrane protein PstA 2964675 5163451 Gura_2560 Geobacter uraniireducens Rf4 phosphate ABC transporter inner membrane protein PstA YP_001231311.1 2963833 D 351605 CDS YP_001231312.1 148264606 5163452 2965162..2965920 1 NC_009483.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 2965920 5163452 Gura_2561 Geobacter uraniireducens Rf4 phosphate ABC transporter ATP-binding protein YP_001231312.1 2965162 D 351605 CDS YP_001231313.1 148264607 5163453 2966088..2966759 1 NC_009483.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; phosphate uptake regulator PhoU 2966759 5163453 Gura_2562 Geobacter uraniireducens Rf4 phosphate uptake regulator PhoU YP_001231313.1 2966088 D 351605 CDS YP_001231314.1 148264608 5163271 complement(2967059..2968234) 1 NC_009483.1 PFAM: transposase, IS4 family protein; transposase, IS4 family protein 2968234 5163271 Gura_2563 Geobacter uraniireducens Rf4 transposase, IS4 family protein YP_001231314.1 2967059 R 351605 CDS YP_001231315.1 148264609 5163272 2968498..2969001 1 NC_009483.1 PFAM: Phosphoglycerate mutase; putative phosphohistidine phosphatase SixA 2969001 5163272 Gura_2564 Geobacter uraniireducens Rf4 putative phosphohistidine phosphatase SixA YP_001231315.1 2968498 D 351605 CDS YP_001231316.1 148264610 5163273 2969035..2969559 1 NC_009483.1 hypothetical protein 2969559 5163273 Gura_2565 Geobacter uraniireducens Rf4 hypothetical protein YP_001231316.1 2969035 D 351605 CDS YP_001231317.1 148264611 5162828 2969560..2970246 1 NC_009483.1 PFAM: thymidylate kinase; dTMP kinase 2970246 5162828 Gura_2566 Geobacter uraniireducens Rf4 dTMP kinase YP_001231317.1 2969560 D 351605 CDS YP_001231318.1 148264612 5162829 2970296..2970979 1 NC_009483.1 PFAM: thymidylate kinase; thymidylate kinase 2970979 5162829 Gura_2567 Geobacter uraniireducens Rf4 thymidylate kinase YP_001231318.1 2970296 D 351605 CDS YP_001231319.1 148264613 5162830 2970976..2971326 1 NC_009483.1 hypothetical protein 2971326 5162830 Gura_2568 Geobacter uraniireducens Rf4 hypothetical protein YP_001231319.1 2970976 D 351605 CDS YP_001231320.1 148264614 5163084 2971339..2972232 1 NC_009483.1 PFAM: CHAD domain containing protein; CHAD domain-containing protein 2972232 5163084 Gura_2569 Geobacter uraniireducens Rf4 CHAD domain-containing protein YP_001231320.1 2971339 D 351605 CDS YP_001231321.1 148264615 5163085 2972229..2973770 1 NC_009483.1 PFAM: Ppx/GppA phosphatase; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; Ppx/GppA phosphatase 2973770 5163085 Gura_2570 Geobacter uraniireducens Rf4 Ppx/GppA phosphatase YP_001231321.1 2972229 D 351605 CDS YP_001231322.1 148264616 5163086 complement(2973843..2974613) 1 NC_009483.1 hypothetical protein 2974613 5163086 Gura_2571 Geobacter uraniireducens Rf4 hypothetical protein YP_001231322.1 2973843 R 351605 CDS YP_001231323.1 148264617 5162967 2975776..2976858 1 NC_009483.1 hypothetical protein 2976858 5162967 Gura_2572 Geobacter uraniireducens Rf4 hypothetical protein YP_001231323.1 2975776 D 351605 CDS YP_001231324.1 148264618 5162968 2976858..2978477 1 NC_009483.1 PFAM: GH3 auxin-responsive promoter; GH3 auxin-responsive promoter 2978477 5162968 Gura_2573 Geobacter uraniireducens Rf4 GH3 auxin-responsive promoter YP_001231324.1 2976858 D 351605 CDS YP_001231325.1 148264619 5162969 2978523..2979056 1 NC_009483.1 hypothetical protein 2979056 5162969 Gura_2574 Geobacter uraniireducens Rf4 hypothetical protein YP_001231325.1 2978523 D 351605 CDS YP_001231326.1 148264620 5163517 2979339..2979893 1 NC_009483.1 hypothetical protein 2979893 5163517 Gura_2575 Geobacter uraniireducens Rf4 hypothetical protein YP_001231326.1 2979339 D 351605 CDS YP_001231327.1 148264621 5163518 2980023..2980184 1 NC_009483.1 hypothetical protein 2980184 5163518 Gura_2576 Geobacter uraniireducens Rf4 hypothetical protein YP_001231327.1 2980023 D 351605 CDS YP_001231328.1 148264622 5163519 2980544..2981335 1 NC_009483.1 hypothetical protein 2981335 5163519 Gura_2577 Geobacter uraniireducens Rf4 hypothetical protein YP_001231328.1 2980544 D 351605 CDS YP_001231329.1 148264623 5163614 2981436..2982776 1 NC_009483.1 hypothetical protein 2982776 5163614 Gura_2578 Geobacter uraniireducens Rf4 hypothetical protein YP_001231329.1 2981436 D 351605 CDS YP_001231330.1 148264624 5163615 complement(2983537..2984529) 1 NC_009483.1 non-specific protein-tyrosine kinase 2984529 5163615 Gura_2579 Geobacter uraniireducens Rf4 non-specific protein-tyrosine kinase YP_001231330.1 2983537 R 351605 CDS YP_001231331.1 148264625 5163616 complement(2984560..2986122) 1 NC_009483.1 PFAM: lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 2986122 5163616 Gura_2580 Geobacter uraniireducens Rf4 lipopolysaccharide biosynthesis protein YP_001231331.1 2984560 R 351605 CDS YP_001231332.1 148264626 5163639 complement(2986158..2987423) 1 NC_009483.1 hypothetical protein 2987423 5163639 Gura_2581 Geobacter uraniireducens Rf4 hypothetical protein YP_001231332.1 2986158 R 351605 CDS YP_001231333.1 148264627 5163640 complement(2987446..2988063) 1 NC_009483.1 PFAM: polysaccharide export protein; polysaccharide export protein 2988063 5163640 Gura_2582 Geobacter uraniireducens Rf4 polysaccharide export protein YP_001231333.1 2987446 R 351605 CDS YP_001231334.1 148264628 5163641 complement(2988334..2990523) 1 NC_009483.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein 2990523 5163641 Gura_2583 Geobacter uraniireducens Rf4 TPR repeat-containing protein YP_001231334.1 2988334 R 351605 CDS YP_001231335.1 148264629 5163718 complement(2990631..2992259) 1 NC_009483.1 PFAM: glycosyl transferase, family 4; glycosyl transferase family protein 2992259 5163718 Gura_2584 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231335.1 2990631 R 351605 CDS YP_001231336.1 148264630 5163719 complement(2992256..2993818) 1 NC_009483.1 TIGRFAM: eight transmembrane protein EpsH; transmembrane protein EpsH 2993818 5163719 Gura_2585 Geobacter uraniireducens Rf4 transmembrane protein EpsH YP_001231336.1 2992256 R 351605 CDS YP_001231337.1 148264631 5163720 complement(2993818..2994774) 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 2994774 5163720 Gura_2586 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001231337.1 2993818 R 351605 CDS YP_001231338.1 148264632 5162676 complement(2994800..2995963) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 2995963 5162676 Gura_2587 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001231338.1 2994800 R 351605 CDS YP_001231339.1 148264633 5162677 complement(2996324..2997604) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 2997604 5162677 Gura_2588 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001231339.1 2996324 R 351605 CDS YP_001231340.1 148264634 5164121 complement(2997757..3000627) 1 NC_009483.1 PFAM: glycoside hydrolase, family 20; glycoside hydrolase family protein 3000627 5164121 Gura_2590 Geobacter uraniireducens Rf4 glycoside hydrolase family protein YP_001231340.1 2997757 R 351605 CDS YP_001231341.1 148264635 5164122 complement(3000629..3001750) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 3001750 5164122 Gura_2591 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001231341.1 3000629 R 351605 CDS YP_001231342.1 148264636 5164123 complement(3001747..3002406) 1 NC_009483.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 3002406 5164123 Gura_2592 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001231342.1 3001747 R 351605 CDS YP_001231343.1 148264637 5164035 complement(3002403..3003404) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 3003404 5164035 Gura_2593 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231343.1 3002403 R 351605 CDS YP_001231344.1 148264638 5164036 complement(3003391..3004677) 1 NC_009483.1 hypothetical protein 3004677 5164036 Gura_2594 Geobacter uraniireducens Rf4 hypothetical protein YP_001231344.1 3003391 R 351605 CDS YP_001231345.1 148264639 5164037 complement(3004696..3006054) 1 NC_009483.1 PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 3006054 5164037 Gura_2595 Geobacter uraniireducens Rf4 polysaccharide biosynthesis protein YP_001231345.1 3004696 R 351605 CDS YP_001231346.1 148264640 5163703 complement(3006104..3006775) 1 NC_009483.1 hypothetical protein 3006775 5163703 Gura_2596 Geobacter uraniireducens Rf4 hypothetical protein YP_001231346.1 3006104 R 351605 CDS YP_001231347.1 148264641 5163704 complement(3006792..3007415) 1 NC_009483.1 hypothetical protein 3007415 5163704 Gura_2597 Geobacter uraniireducens Rf4 hypothetical protein YP_001231347.1 3006792 R 351605 CDS YP_001231348.1 148264642 5163705 complement(3007714..3008790) 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 3008790 5163705 Gura_2598 Geobacter uraniireducens Rf4 NAD-dependent epimerase/dehydratase YP_001231348.1 3007714 R 351605 CDS YP_001231349.1 148264643 5163979 3009091..3011271 1 NC_009483.1 TIGRFAM: conserved repeat domain; PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; protein of unknown function DUF11; peptidase domain protein; hypothetical protein 3011271 5163979 Gura_2599 Geobacter uraniireducens Rf4 hypothetical protein YP_001231349.1 3009091 D 351605 CDS YP_001231350.1 148264644 5163980 3011393..3011776 1 NC_009483.1 hypothetical protein 3011776 5163980 Gura_2600 Geobacter uraniireducens Rf4 hypothetical protein YP_001231350.1 3011393 D 351605 CDS YP_001231351.1 148264645 5163981 3011786..3013975 1 NC_009483.1 hypothetical protein 3013975 5163981 Gura_2601 Geobacter uraniireducens Rf4 hypothetical protein YP_001231351.1 3011786 D 351605 CDS YP_001231352.1 148264646 5163188 3014251..3016689 1 NC_009483.1 PFAM: glycosyl transferase, group 1; PHP C-terminal domain protein; group 1 glycosyl transferase 3016689 5163188 Gura_2602 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001231352.1 3014251 D 351605 CDS YP_001231353.1 148264647 5163189 3016711..3016890 1 NC_009483.1 hypothetical protein 3016890 5163189 Gura_2603 Geobacter uraniireducens Rf4 hypothetical protein YP_001231353.1 3016711 D 351605 CDS YP_001231354.1 148264648 5163190 complement(3016929..3017927) 1 NC_009483.1 hypothetical protein 3017927 5163190 Gura_2604 Geobacter uraniireducens Rf4 hypothetical protein YP_001231354.1 3016929 R 351605 CDS YP_001231355.1 148264649 5164208 complement(3017952..3018932) 1 NC_009483.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 3018932 5164208 Gura_2605 Geobacter uraniireducens Rf4 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001231355.1 3017952 R 351605 CDS YP_001231356.1 148264650 5164209 complement(3019131..3020849) 1 NC_009483.1 hypothetical protein 3020849 5164209 Gura_2606 Geobacter uraniireducens Rf4 hypothetical protein YP_001231356.1 3019131 R 351605 CDS YP_001231357.1 148264651 5164210 complement(3021020..3021754) 1 NC_009483.1 hypothetical protein 3021754 5164210 Gura_2607 Geobacter uraniireducens Rf4 hypothetical protein YP_001231357.1 3021020 R 351605 CDS YP_001231358.1 148264652 5164265 complement(3021890..3022297) 1 NC_009483.1 PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 3022297 5164265 Gura_2608 Geobacter uraniireducens Rf4 biopolymer transport protein ExbD/TolR YP_001231358.1 3021890 R 351605 CDS YP_001231359.1 148264653 5164266 complement(3022294..3024090) 1 NC_009483.1 PFAM: MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 3024090 5164266 Gura_2609 Geobacter uraniireducens Rf4 MotA/TolQ/ExbB proton channel YP_001231359.1 3022294 R 351605 CDS YP_001231360.1 148264654 5164267 complement(3024115..3034137) 1 NC_009483.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; filamentous hemagglutinin outer membrane protein 3034137 5164267 Gura_2610 Geobacter uraniireducens Rf4 filamentous hemagglutinin outer membrane protein YP_001231360.1 3024115 R 351605 CDS YP_001231361.1 148264655 5163700 complement(3034202..3035833) 1 NC_009483.1 PFAM: Polypeptide-transport-associated protein domain protein, ShlB-type; polypeptide-transport-associated domain-containing protein 3035833 5163700 Gura_2611 Geobacter uraniireducens Rf4 polypeptide-transport-associated domain-containing protein YP_001231361.1 3034202 R 351605 CDS YP_001231362.1 148264656 5163701 3035969..3037210 1 NC_009483.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 3037210 5163701 Gura_2612 Geobacter uraniireducens Rf4 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001231362.1 3035969 D 351605 CDS YP_001231363.1 148264657 5163702 complement(3037257..3038522) 1 NC_009483.1 PFAM: peptidylprolyl isomerase, FKBP-type; Thioredoxin domain; FKBP-type peptidylprolyl isomerase 3038522 5163702 Gura_2613 Geobacter uraniireducens Rf4 FKBP-type peptidylprolyl isomerase YP_001231363.1 3037257 R 351605 CDS YP_001231364.1 148264658 5164338 complement(3038519..3039337) 1 NC_009483.1 hypothetical protein 3039337 5164338 Gura_2614 Geobacter uraniireducens Rf4 hypothetical protein YP_001231364.1 3038519 R 351605 CDS YP_001231365.1 148264659 5164339 3039770..3041434 1 NC_009483.1 hypothetical protein 3041434 5164339 Gura_2615 Geobacter uraniireducens Rf4 hypothetical protein YP_001231365.1 3039770 D 351605 CDS YP_001231366.1 148264660 5164340 complement(3042370..3042885) 1 NC_009483.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 3042885 5164340 Gura_2616 Geobacter uraniireducens Rf4 adenine phosphoribosyltransferase YP_001231366.1 3042370 R 351605 CDS YP_001231367.1 148264661 5163904 complement(3042895..3043905) 1 NC_009483.1 PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; RpoD family RNA polymerase sigma factor 3043905 5163904 Gura_2617 Geobacter uraniireducens Rf4 RpoD family RNA polymerase sigma factor YP_001231367.1 3042895 R 351605 CDS YP_001231368.1 148264662 5163905 complement(3043987..3044640) 1 NC_009483.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 3044640 5163905 Gura_2618 Geobacter uraniireducens Rf4 protein-L-isoaspartate O-methyltransferase YP_001231368.1 3043987 R 351605 CDS YP_001231369.1 148264663 5163906 complement(3044697..3045443) 1 NC_009483.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 3045443 surE 5163906 surE Geobacter uraniireducens Rf4 stationary phase survival protein SurE YP_001231369.1 3044697 R 351605 CDS YP_001231370.1 148264664 5163090 3045742..3046461 1 NC_009483.1 PFAM: regulatory protein, LuxR; response regulator receiver protein 3046461 5163090 Gura_2620 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001231370.1 3045742 D 351605 CDS YP_001231371.1 148264665 5163092 complement(3046868..3047221) 1 NC_009483.1 PFAM: regulatory protein, MerR; MerR family transcriptional regulator 3047221 5163092 Gura_2621 Geobacter uraniireducens Rf4 MerR family transcriptional regulator YP_001231371.1 3046868 R 351605 CDS YP_001231372.1 148264666 5164402 complement(3047242..3047520) 1 NC_009483.1 PFAM: histone family protein DNA-binding protein; histone family protein DNA-binding protein 3047520 5164402 Gura_2622 Geobacter uraniireducens Rf4 histone family protein DNA-binding protein YP_001231372.1 3047242 R 351605 CDS YP_001231373.1 148264667 5164403 complement(3047613..3050018) 1 NC_009483.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 3050018 pheT 5164403 pheT Geobacter uraniireducens Rf4 phenylalanyl-tRNA synthetase subunit beta YP_001231373.1 3047613 R 351605 CDS YP_001231374.1 148264668 5164443 complement(3050097..3051113) 1 NC_009483.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 3051113 pheS 5164443 pheS Geobacter uraniireducens Rf4 phenylalanyl-tRNA synthetase subunit alpha YP_001231374.1 3050097 R 351605 CDS YP_001231375.1 148264669 5164444 complement(3051189..3051542) 1 NC_009483.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 3051542 rplT 5164444 rplT Geobacter uraniireducens Rf4 50S ribosomal protein L20 YP_001231375.1 3051189 R 351605 CDS YP_001231376.1 148264670 5164445 complement(3051709..3051906) 1 NC_009483.1 PFAM: ribosomal protein L35; 50S ribosomal protein L35 3051906 rpmI 5164445 rpmI Geobacter uraniireducens Rf4 50S ribosomal protein L35 YP_001231376.1 3051709 R 351605 CDS YP_001231377.1 148264671 5164600 complement(3051933..3052349) 1 NC_009483.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; translation initiation factor IF-3 3052349 5164600 Gura_2627 Geobacter uraniireducens Rf4 translation initiation factor IF-3 YP_001231377.1 3051933 R 351605 CDS YP_001231378.1 148264672 5164601 complement(3052467..3054404) 1 NC_009483.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 3054404 thrS 5164601 thrS Geobacter uraniireducens Rf4 threonyl-tRNA synthetase YP_001231378.1 3052467 R 351605 CDS YP_001231379.1 148264673 5164602 complement(3054841..3055647) 1 NC_009483.1 hypothetical protein 3055647 5164602 Gura_2629 Geobacter uraniireducens Rf4 hypothetical protein YP_001231379.1 3054841 R 351605 CDS YP_001231380.1 148264674 5163790 complement(3055682..3056755) 1 NC_009483.1 hypothetical protein 3056755 5163790 Gura_2630 Geobacter uraniireducens Rf4 hypothetical protein YP_001231380.1 3055682 R 351605 CDS YP_001231381.1 148264675 5163791 complement(3057191..3057598) 1 NC_009483.1 hypothetical protein 3057598 5163791 Gura_2631 Geobacter uraniireducens Rf4 hypothetical protein YP_001231381.1 3057191 R 351605 CDS YP_001231382.1 148264676 5163792 complement(3057595..3060360) 1 NC_009483.1 hypothetical protein 3060360 5163792 Gura_2632 Geobacter uraniireducens Rf4 hypothetical protein YP_001231382.1 3057595 R 351605 CDS YP_001231383.1 148264677 5164456 complement(3060471..3061568) 1 NC_009483.1 PFAM: protein of unknown function UPF0118; hypothetical protein 3061568 5164456 Gura_2633 Geobacter uraniireducens Rf4 hypothetical protein YP_001231383.1 3060471 R 351605 CDS YP_001231384.1 148264678 5164457 complement(3061620..3062258) 1 NC_009483.1 PFAM: protein of unknown function DUF330; hypothetical protein 3062258 5164457 Gura_2634 Geobacter uraniireducens Rf4 hypothetical protein YP_001231384.1 3061620 R 351605 CDS YP_001231385.1 148264679 5164458 complement(3062274..3063260) 1 NC_009483.1 PFAM: Mammalian cell entry related domain protein; hypothetical protein 3063260 5164458 Gura_2635 Geobacter uraniireducens Rf4 hypothetical protein YP_001231385.1 3062274 R 351605 CDS YP_001231386.1 148264680 5164419 complement(3063294..3064079) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3064079 5164419 Gura_2636 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001231386.1 3063294 R 351605 CDS YP_001231387.1 148264681 5164420 complement(3064082..3065287) 1 NC_009483.1 PFAM: protein of unknown function DUF140; hypothetical protein 3065287 5164420 Gura_2637 Geobacter uraniireducens Rf4 hypothetical protein YP_001231387.1 3064082 R 351605 CDS YP_001231388.1 148264682 5164735 complement(3065984..3066304) 1 NC_009483.1 exopolyphosphatase-like protein 3066304 5164735 Gura_2639 Geobacter uraniireducens Rf4 exopolyphosphatase-like protein YP_001231388.1 3065984 R 351605 CDS YP_001231389.1 148264683 5164736 complement(3066301..3067194) 1 NC_009483.1 PFAM: CHAD domain containing protein; CHAD domain-containing protein 3067194 5164736 Gura_2640 Geobacter uraniireducens Rf4 CHAD domain-containing protein YP_001231389.1 3066301 R 351605 CDS YP_001231390.1 148264684 5164737 complement(3067191..3067544) 1 NC_009483.1 hypothetical protein 3067544 5164737 Gura_2641 Geobacter uraniireducens Rf4 hypothetical protein YP_001231390.1 3067191 R 351605 CDS YP_001231391.1 148264685 5164699 complement(3067546..3068226) 1 NC_009483.1 PFAM: thymidylate kinase; thymidylate kinase 3068226 5164699 Gura_2642 Geobacter uraniireducens Rf4 thymidylate kinase YP_001231391.1 3067546 R 351605 CDS YP_001231392.1 148264686 5164700 complement(3068279..3068962) 1 NC_009483.1 PFAM: thymidylate kinase; dTMP kinase 3068962 5164700 Gura_2643 Geobacter uraniireducens Rf4 dTMP kinase YP_001231392.1 3068279 R 351605 CDS YP_001231393.1 148264687 5164701 complement(3068959..3069486) 1 NC_009483.1 hypothetical protein 3069486 5164701 Gura_2644 Geobacter uraniireducens Rf4 hypothetical protein YP_001231393.1 3068959 R 351605 CDS YP_001231394.1 148264688 5163343 complement(3069526..3070029) 1 NC_009483.1 TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; phosphohistidine phosphatase SixA 3070029 5163343 Gura_2645 Geobacter uraniireducens Rf4 phosphohistidine phosphatase SixA YP_001231394.1 3069526 R 351605 CDS YP_001231395.1 148264689 5163344 complement(3070299..3070988) 1 NC_009483.1 hypothetical protein 3070988 5163344 Gura_2646 Geobacter uraniireducens Rf4 hypothetical protein YP_001231395.1 3070299 R 351605 CDS YP_001231396.1 148264690 5163345 complement(3071197..3072021) 1 NC_009483.1 PFAM: protein of unknown function DUF344; hypothetical protein 3072021 5163345 Gura_2647 Geobacter uraniireducens Rf4 hypothetical protein YP_001231396.1 3071197 R 351605 CDS YP_001231397.1 148264691 5165023 complement(3072155..3074026) 1 NC_009483.1 SMART: Aldehyde ferredoxin oxidoreductase-like; aldehyde ferredoxin oxidoreductase-like protein 3074026 5165023 Gura_2648 Geobacter uraniireducens Rf4 aldehyde ferredoxin oxidoreductase-like protein YP_001231397.1 3072155 R 351605 CDS YP_001231398.1 148264692 5165024 complement(3074116..3074490) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 3074490 5165024 Gura_2649 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001231398.1 3074116 R 351605 CDS YP_001231399.1 148264693 5164579 complement(3074737..3075180) 1 NC_009483.1 PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase, 20 kDa subunit 3075180 5164579 Gura_2651 Geobacter uraniireducens Rf4 NADH ubiquinone oxidoreductase, 20 kDa subunit YP_001231399.1 3074737 R 351605 CDS YP_001231400.1 148264694 5164580 complement(3075199..3076080) 1 NC_009483.1 PFAM: respiratory-chain NADH dehydrogenase, subunit 1; respiratory-chain NADH dehydrogenase subunit 1 3076080 5164580 Gura_2652 Geobacter uraniireducens Rf4 respiratory-chain NADH dehydrogenase subunit 1 YP_001231400.1 3075199 R 351605 CDS YP_001231401.1 148264695 5164581 complement(3076467..3078365) 1 NC_009483.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase (quinone) 3078365 5164581 Gura_2653 Geobacter uraniireducens Rf4 NADH dehydrogenase (quinone) YP_001231401.1 3076467 R 351605 CDS YP_001231402.1 148264696 5164665 complement(3078509..3080167) 1 NC_009483.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 3080167 5164665 Gura_2654 Geobacter uraniireducens Rf4 phosphoglucomutase YP_001231402.1 3078509 R 351605 CDS YP_001231403.1 148264697 5164666 complement(3080206..3081627) 1 NC_009483.1 PFAM: pyruvate kinase; pyruvate kinase 3081627 5164666 Gura_2655 Geobacter uraniireducens Rf4 pyruvate kinase YP_001231403.1 3080206 R 351605 CDS YP_001231404.1 148264698 5164667 complement(3081779..3083047) 1 NC_009483.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 3083047 5164667 Gura_2656 Geobacter uraniireducens Rf4 acetate kinase YP_001231404.1 3081779 R 351605 CDS YP_001231405.1 148264699 5163420 complement(3083085..3084374) 1 NC_009483.1 catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; diphosphate--fructose-6-phosphate 1-phosphotransferase 3084374 5163420 Gura_2657 Geobacter uraniireducens Rf4 diphosphate--fructose-6-phosphate 1-phosphotransferase YP_001231405.1 3083085 R 351605 CDS YP_001231406.1 148264700 5163421 complement(3084562..3085245) 1 NC_009483.1 hypothetical protein 3085245 5163421 Gura_2658 Geobacter uraniireducens Rf4 hypothetical protein YP_001231406.1 3084562 R 351605 CDS YP_001231407.1 148264701 5163422 complement(3085276..3086343) 1 NC_009483.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 3086343 5163422 Gura_2659 Geobacter uraniireducens Rf4 glyceraldehyde-3-phosphate dehydrogenase YP_001231407.1 3085276 R 351605 CDS YP_001231408.1 148264702 5164747 complement(3086412..3087389) 1 NC_009483.1 hypothetical protein 3087389 5164747 Gura_2660 Geobacter uraniireducens Rf4 hypothetical protein YP_001231408.1 3086412 R 351605 CDS YP_001231409.1 148264703 5164748 complement(3087615..3090128) 1 NC_009483.1 TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35; glycogen/starch/alpha-glucan phosphorylase 3090128 5164748 Gura_2661 Geobacter uraniireducens Rf4 glycogen/starch/alpha-glucan phosphorylase YP_001231409.1 3087615 R 351605 CDS YP_001231410.1 148264704 5165064 complement(3090304..3091794) 1 NC_009483.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein 3091794 5165064 Gura_2663 Geobacter uraniireducens Rf4 RND efflux system outer membrane lipoprotein YP_001231410.1 3090304 R 351605 CDS YP_001231411.1 148264705 5165065 complement(3091796..3095008) 1 NC_009483.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein 3095008 5165065 Gura_2664 Geobacter uraniireducens Rf4 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001231411.1 3091796 R 351605 CDS YP_001231412.1 148264706 5165066 complement(3095024..3096256) 1 NC_009483.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 3096256 5165066 Gura_2665 Geobacter uraniireducens Rf4 RND family efflux transporter MFP subunit YP_001231412.1 3095024 R 351605 CDS YP_001231413.1 148264707 5165073 complement(3096787..3097743) 1 NC_009483.1 hypothetical protein 3097743 5165073 Gura_2666 Geobacter uraniireducens Rf4 hypothetical protein YP_001231413.1 3096787 R 351605 CDS YP_001231414.1 148264708 5165074 complement(3097801..3099063) 1 NC_009483.1 hypothetical protein 3099063 5165074 Gura_2667 Geobacter uraniireducens Rf4 hypothetical protein YP_001231414.1 3097801 R 351605 CDS YP_001231415.1 148264709 5165075 complement(3099094..3099705) 1 NC_009483.1 hypothetical protein 3099705 5165075 Gura_2668 Geobacter uraniireducens Rf4 hypothetical protein YP_001231415.1 3099094 R 351605 CDS YP_001231416.1 148264710 5164547 complement(3099854..3100555) 1 NC_009483.1 hypothetical protein 3100555 5164547 Gura_2669 Geobacter uraniireducens Rf4 hypothetical protein YP_001231416.1 3099854 R 351605 CDS YP_001231417.1 148264711 5164548 complement(3100624..3100962) 1 NC_009483.1 PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 3100962 5164548 Gura_2670 Geobacter uraniireducens Rf4 antibiotic biosynthesis monooxygenase YP_001231417.1 3100624 R 351605 CDS YP_001231418.1 148264712 5164549 complement(3101099..3103279) 1 NC_009483.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; NifA subfamily transcriptional regulator 3103279 5164549 Gura_2671 Geobacter uraniireducens Rf4 NifA subfamily transcriptional regulator YP_001231418.1 3101099 R 351605 CDS YP_001231419.1 148264713 5165303 complement(3103786..3104337) 1 NC_009483.1 hypothetical protein 3104337 5165303 Gura_2672 Geobacter uraniireducens Rf4 hypothetical protein YP_001231419.1 3103786 R 351605 CDS YP_001231420.1 148264714 5165305 complement(3104793..3105665) 1 NC_009483.1 hypothetical protein 3105665 5165305 Gura_2673 Geobacter uraniireducens Rf4 hypothetical protein YP_001231420.1 3104793 R 351605 CDS YP_001231421.1 148264715 5164877 complement(3105662..3106474) 1 NC_009483.1 hypothetical protein 3106474 5164877 Gura_2674 Geobacter uraniireducens Rf4 hypothetical protein YP_001231421.1 3105662 R 351605 CDS YP_001231422.1 148264716 5164878 complement(3106477..3107220) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3107220 5164878 Gura_2675 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001231422.1 3106477 R 351605 CDS YP_001231423.1 148264717 5165497 complement(3107272..3108447) 1 NC_009483.1 PFAM: transposase, IS4 family protein; transposase, IS4 family protein 3108447 5165497 Gura_2676 Geobacter uraniireducens Rf4 transposase, IS4 family protein YP_001231423.1 3107272 R 351605 CDS YP_001231424.1 148264718 5165498 complement(3108709..3109320) 1 NC_009483.1 hypothetical protein 3109320 5165498 Gura_2677 Geobacter uraniireducens Rf4 hypothetical protein YP_001231424.1 3108709 R 351605 CDS YP_001231425.1 148264719 5165499 complement(3109593..3110966) 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 3110966 5165499 Gura_2678 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001231425.1 3109593 R 351605 CDS YP_001231426.1 148264720 5165557 complement(3111044..3112678) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 3112678 5165557 Gura_2679 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001231426.1 3111044 R 351605 CDS YP_001231427.1 148264721 5165558 complement(3112682..3113899) 1 NC_009483.1 PFAM: type II secretion system protein; type II secretion system protein 3113899 5165558 Gura_2680 Geobacter uraniireducens Rf4 type II secretion system protein YP_001231427.1 3112682 R 351605 CDS YP_001231428.1 148264722 5165559 complement(3113959..3115065) 1 NC_009483.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein 3115065 5165559 Gura_2681 Geobacter uraniireducens Rf4 twitching motility protein YP_001231428.1 3113959 R 351605 CDS YP_001231429.1 148264723 5165446 complement(3115078..3116784) 1 NC_009483.1 TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; type IV-A pilus assembly ATPase PilB 3116784 5165446 Gura_2682 Geobacter uraniireducens Rf4 type IV-A pilus assembly ATPase PilB YP_001231429.1 3115078 R 351605 CDS YP_001231430.1 148264724 5165447 complement(3116854..3117723) 1 NC_009483.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding, N-terminal domain protein; shikimate 5-dehydrogenase 3117723 5165447 Gura_2683 Geobacter uraniireducens Rf4 shikimate 5-dehydrogenase YP_001231430.1 3116854 R 351605 CDS YP_001231431.1 148264725 5165448 complement(3117720..3119585) 1 NC_009483.1 hypothetical protein 3119585 5165448 Gura_2684 Geobacter uraniireducens Rf4 hypothetical protein YP_001231431.1 3117720 R 351605 CDS YP_001231432.1 148264726 5164644 complement(3119578..3120606) 1 NC_009483.1 PFAM: conserved hypothetical protein 374; hypothetical protein 3120606 5164644 Gura_2685 Geobacter uraniireducens Rf4 hypothetical protein YP_001231432.1 3119578 R 351605 CDS YP_001231433.1 148264727 5164645 complement(3120609..3121571) 1 NC_009483.1 TIGRFAM: riboflavin biosynthesis protein RibF; cytidyltransferase-related domain; PFAM: Riboflavin kinase / FAD synthetase; cytidylyltransferase; riboflavin biosynthesis protein RibF 3121571 5164645 Gura_2686 Geobacter uraniireducens Rf4 riboflavin biosynthesis protein RibF YP_001231433.1 3120609 R 351605 CDS YP_001231434.1 148264728 5164646 complement(3121607..3122443) 1 NC_009483.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase subunit TatC 3122443 5164646 Gura_2687 Geobacter uraniireducens Rf4 Sec-independent protein translocase subunit TatC YP_001231434.1 3121607 R 351605 CDS YP_001231435.1 148264729 5165946 complement(3122633..3123685) 1 NC_009483.1 PFAM: CheB methylesterase; response regulator receiver; response regulator receiver modulated CheB methylesterase 3123685 5165946 Gura_2688 Geobacter uraniireducens Rf4 response regulator receiver modulated CheB methylesterase YP_001231435.1 3122633 R 351605 CDS YP_001231436.1 148264730 5165947 complement(3123696..3124547) 1 NC_009483.1 PFAM: MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase 3124547 5165947 Gura_2689 Geobacter uraniireducens Rf4 protein-glutamate O-methyltransferase YP_001231436.1 3123696 R 351605 CDS YP_001231437.1 148264731 5165948 complement(3124608..3125306) 1 NC_009483.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; HEAT repeat-containing PBS lyase 3125306 5165948 Gura_2690 Geobacter uraniireducens Rf4 HEAT repeat-containing PBS lyase YP_001231437.1 3124608 R 351605 CDS YP_001231438.1 148264732 5165940 complement(3125299..3126195) 1 NC_009483.1 PFAM: MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase 3126195 5165940 Gura_2691 Geobacter uraniireducens Rf4 protein-glutamate O-methyltransferase YP_001231438.1 3125299 R 351605 CDS YP_001231439.1 148264733 5165941 complement(3126266..3128572) 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3128572 5165941 Gura_2692 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001231439.1 3126266 R 351605 CDS YP_001231440.1 148264734 5165942 complement(3128621..3129112) 1 NC_009483.1 PFAM: CheW domain protein; putative CheW protein 3129112 5165942 Gura_2693 Geobacter uraniireducens Rf4 putative CheW protein YP_001231440.1 3128621 R 351605 CDS YP_001231441.1 148264735 5165760 complement(3129165..3130841) 1 NC_009483.1 PFAM: CheW domain protein; ATP-binding region, ATPase domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; CheA signal transduction histidine kinase 3130841 5165760 Gura_2694 Geobacter uraniireducens Rf4 CheA signal transduction histidine kinase YP_001231441.1 3129165 R 351605 CDS YP_001231442.1 148264736 5165761 complement(3130854..3131255) 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 3131255 5165761 Gura_2695 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001231442.1 3130854 R 351605 CDS YP_001231443.1 148264737 5165762 complement(3131297..3131689) 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 3131689 5165762 Gura_2696 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001231443.1 3131297 R 351605 CDS YP_001231444.1 148264738 5164647 complement(3132110..3133453) 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 3133453 5164647 Gura_2697 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001231444.1 3132110 R 351605 CDS YP_001231445.1 148264739 5164648 complement(3133450..3134766) 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 3134766 5164648 Gura_2698 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001231445.1 3133450 R 351605 CDS YP_001231446.1 148264740 5164649 complement(3134933..3137224) 1 NC_009483.1 TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B, OB region N-terminal domain; SMART: Cold shock protein; ribonuclease R 3137224 5164649 Gura_2699 Geobacter uraniireducens Rf4 ribonuclease R YP_001231446.1 3134933 R 351605 CDS YP_001231447.1 148264741 5162733 3137659..3139806 1 NC_009483.1 PFAM: TPR repeat-containing protein; Lytic transglycosylase, catalytic; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; lytic transglycosylase 3139806 5162733 Gura_2700 Geobacter uraniireducens Rf4 lytic transglycosylase YP_001231447.1 3137659 D 351605 CDS YP_001231448.1 148264742 5162734 3140091..3141908 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3141908 5162734 Gura_2701 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001231448.1 3140091 D 351605 CDS YP_001231449.1 148264743 5162735 3141901..3143100 1 NC_009483.1 hypothetical protein 3143100 5162735 Gura_2702 Geobacter uraniireducens Rf4 hypothetical protein YP_001231449.1 3141901 D 351605 CDS YP_001231450.1 148264744 5165667 3143258..3143671 1 NC_009483.1 PFAM: regulatory protein, MarR; MarR family transcriptional regulator 3143671 5165667 Gura_2703 Geobacter uraniireducens Rf4 MarR family transcriptional regulator YP_001231450.1 3143258 D 351605 CDS YP_001231451.1 148264745 5165668 3143685..3144956 1 NC_009483.1 PFAM: outer membrane efflux protein; outer membrane efflux protein 3144956 5165668 Gura_2704 Geobacter uraniireducens Rf4 outer membrane efflux protein YP_001231451.1 3143685 D 351605 CDS YP_001231452.1 148264746 5165669 3145189..3146295 1 NC_009483.1 PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein 3146295 5165669 Gura_2705 Geobacter uraniireducens Rf4 secretion protein HlyD family protein YP_001231452.1 3145189 D 351605 CDS YP_001231453.1 148264747 5166575 3146510..3148123 1 NC_009483.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA family drug resistance transporter 3148123 5166575 Gura_2706 Geobacter uraniireducens Rf4 EmrB/QacA family drug resistance transporter YP_001231453.1 3146510 D 351605 CDS YP_001231454.1 148264748 5166576 3148409..3150739 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 3150739 5166576 Gura_2707 Geobacter uraniireducens Rf4 multi-sensor hybrid histidine kinase YP_001231454.1 3148409 D 351605 CDS YP_001231455.1 148264749 5166577 3150721..3152127 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 3152127 5166577 Gura_2708 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001231455.1 3150721 D 351605 CDS YP_001231456.1 148264750 5165890 3152504..3152776 1 NC_009483.1 hypothetical protein 3152776 5165890 Gura_2709 Geobacter uraniireducens Rf4 hypothetical protein YP_001231456.1 3152504 D 351605 CDS YP_001231457.1 148264751 5165891 3152810..3153229 1 NC_009483.1 response regulator receiver protein 3153229 5165891 Gura_2710 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001231457.1 3152810 D 351605 CDS YP_001231458.1 148264752 5165892 3153226..3153477 1 NC_009483.1 hypothetical protein 3153477 5165892 Gura_2711 Geobacter uraniireducens Rf4 hypothetical protein YP_001231458.1 3153226 D 351605 CDS YP_001231459.1 148264753 5165914 3153673..3154773 1 NC_009483.1 hypothetical protein 3154773 5165914 Gura_2712 Geobacter uraniireducens Rf4 hypothetical protein YP_001231459.1 3153673 D 351605 CDS YP_001231460.1 148264754 5165915 3154770..3155438 1 NC_009483.1 PFAM: cytochrome B561; cytochrome B561 3155438 5165915 Gura_2713 Geobacter uraniireducens Rf4 cytochrome B561 YP_001231460.1 3154770 D 351605 CDS YP_001231461.1 148264755 5165916 3155477..3155992 1 NC_009483.1 hypothetical protein 3155992 5165916 Gura_2714 Geobacter uraniireducens Rf4 hypothetical protein YP_001231461.1 3155477 D 351605 CDS YP_001231462.1 148264756 5166016 3156197..3156439 1 NC_009483.1 PFAM: CopG domain protein DNA-binding domain protein; CopG family transcriptional regulator 3156439 5166016 Gura_2715 Geobacter uraniireducens Rf4 CopG family transcriptional regulator YP_001231462.1 3156197 D 351605 CDS YP_001231463.1 148264757 5166017 3156424..3156759 1 NC_009483.1 PFAM: PemK family protein; transcriptional modulator of MazE/toxin MazF 3156759 5166017 Gura_2716 Geobacter uraniireducens Rf4 transcriptional modulator of MazE/toxin MazF YP_001231463.1 3156424 D 351605 CDS YP_001231464.1 148264758 5166018 3156865..3157116 1 NC_009483.1 PFAM: CopG domain protein DNA-binding domain protein; CopG family transcriptional regulator 3157116 5166018 Gura_2717 Geobacter uraniireducens Rf4 CopG family transcriptional regulator YP_001231464.1 3156865 D 351605 CDS YP_001231465.1 148264759 5166055 3157094..3157378 1 NC_009483.1 TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; addiction module antitoxin 3157378 5166055 Gura_2718 Geobacter uraniireducens Rf4 addiction module antitoxin YP_001231465.1 3157094 D 351605 CDS YP_001231466.1 148264760 5166056 complement(3157375..3157767) 1 NC_009483.1 hypothetical protein 3157767 5166056 Gura_2719 Geobacter uraniireducens Rf4 hypothetical protein YP_001231466.1 3157375 R 351605 CDS YP_001231467.1 148264761 5166057 complement(3158010..3158708) 1 NC_009483.1 hypothetical protein 3158708 5166057 Gura_2720 Geobacter uraniireducens Rf4 hypothetical protein YP_001231467.1 3158010 R 351605 CDS YP_001231468.1 148264762 5165822 complement(3159159..3159449) 1 NC_009483.1 TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; CRISPR-associated Cas2 family protein 3159449 5165822 Gura_2721 Geobacter uraniireducens Rf4 CRISPR-associated Cas2 family protein YP_001231468.1 3159159 R 351605 CDS YP_001231469.1 148264763 5165823 complement(3159570..3160013) 1 NC_009483.1 PFAM: protein of unknown function DUF559; hypothetical protein 3160013 5165823 Gura_2722 Geobacter uraniireducens Rf4 hypothetical protein YP_001231469.1 3159570 R 351605 CDS YP_001231470.1 148264764 5166498 complement(3160070..3160696) 1 NC_009483.1 TIGRFAM: CRISPR-associated protein Cas4; CRISPR-associated Cas4 family protein 3160696 5166498 Gura_2723 Geobacter uraniireducens Rf4 CRISPR-associated Cas4 family protein YP_001231470.1 3160070 R 351605 CDS YP_001231471.1 148264765 5166499 complement(3160875..3161030) 1 NC_009483.1 hypothetical protein 3161030 5166499 Gura_2724 Geobacter uraniireducens Rf4 hypothetical protein YP_001231471.1 3160875 R 351605 CDS YP_001231472.1 148264766 5166500 complement(3161251..3161724) 1 NC_009483.1 hypothetical protein 3161724 5166500 Gura_2725 Geobacter uraniireducens Rf4 hypothetical protein YP_001231472.1 3161251 R 351605 CDS YP_001231473.1 148264767 5166441 3162267..3162533 1 NC_009483.1 TIGRFAM: putative addiction module component, TIGR02574 family; addiction module proein 3162533 5166441 Gura_2726 Geobacter uraniireducens Rf4 addiction module proein YP_001231473.1 3162267 D 351605 CDS YP_001231474.1 148264768 5166442 3162530..3162847 1 NC_009483.1 hypothetical protein 3162847 5166442 Gura_2727 Geobacter uraniireducens Rf4 hypothetical protein YP_001231474.1 3162530 D 351605 CDS YP_001231475.1 148264769 5166443 3162953..3164116 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase 3164116 5166443 Gura_2728 Geobacter uraniireducens Rf4 histidine kinase YP_001231475.1 3162953 D 351605 CDS YP_001231476.1 148264770 5166355 complement(3164245..3164964) 1 NC_009483.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 3164964 5166355 Gura_2729 Geobacter uraniireducens Rf4 pyridoxine 5'-phosphate synthase YP_001231476.1 3164245 R 351605 CDS YP_001231477.1 148264771 5166356 complement(3164957..3166321) 1 NC_009483.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 3166321 glmM 5166356 glmM Geobacter uraniireducens Rf4 phosphoglucosamine mutase YP_001231477.1 3164957 R 351605 CDS YP_001231478.1 148264772 5166357 complement(3166360..3166758) 1 NC_009483.1 hypothetical protein 3166758 5166357 Gura_2731 Geobacter uraniireducens Rf4 hypothetical protein YP_001231478.1 3166360 R 351605 CDS YP_001231479.1 148264773 5166322 complement(3166755..3167582) 1 NC_009483.1 PFAM: protein of unknown function DUF147; hypothetical protein 3167582 5166322 Gura_2732 Geobacter uraniireducens Rf4 hypothetical protein YP_001231479.1 3166755 R 351605 CDS YP_001231480.1 148264774 5166323 complement(3167601..3168455) 1 NC_009483.1 TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS; dihydropteroate synthase 3168455 5166323 Gura_2733 Geobacter uraniireducens Rf4 dihydropteroate synthase YP_001231480.1 3167601 R 351605 CDS YP_001231481.1 148264775 5166324 complement(3168455..3170308) 1 NC_009483.1 TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 3170308 5166324 Gura_2734 Geobacter uraniireducens Rf4 ATP-dependent metalloprotease FtsH YP_001231481.1 3168455 R 351605 CDS YP_001231482.1 148264776 5166244 complement(3170419..3171798) 1 NC_009483.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; tRNA(Ile)-lysidine synthetase domain protein; tRNA(Ile)-lysidine synthetase 3171798 5166244 Gura_2735 Geobacter uraniireducens Rf4 tRNA(Ile)-lysidine synthetase YP_001231482.1 3170419 R 351605 CDS YP_001231483.1 148264777 5166245 complement(3172019..3172528) 1 NC_009483.1 hypothetical protein 3172528 5166245 Gura_2736 Geobacter uraniireducens Rf4 hypothetical protein YP_001231483.1 3172019 R 351605 CDS YP_001231484.1 148264778 5166246 complement(3172530..3173285) 1 NC_009483.1 PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 3173285 5166246 Gura_2737 Geobacter uraniireducens Rf4 filamentation induced by cAMP protein fic YP_001231484.1 3172530 R 351605 CDS YP_001231485.1 148264779 5166152 complement(3173464..3175149) 1 NC_009483.1 PFAM: AAA-4 family protein; putative transcriptional regulator 3175149 5166152 Gura_2738 Geobacter uraniireducens Rf4 putative transcriptional regulator YP_001231485.1 3173464 R 351605 CDS YP_001231486.1 148264780 5166153 complement(3175528..3178173) 1 NC_009483.1 hypothetical protein 3178173 5166153 Gura_2739 Geobacter uraniireducens Rf4 hypothetical protein YP_001231486.1 3175528 R 351605 CDS YP_001231487.1 148264781 5166154 complement(3178178..3180007) 1 NC_009483.1 PFAM: DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 3180007 5166154 Gura_2740 Geobacter uraniireducens Rf4 DNA methylase N-4/N-6 domain-containing protein YP_001231487.1 3178178 R 351605 CDS YP_001231488.1 148264782 5166063 complement(3180152..3181831) 1 NC_009483.1 hypothetical protein 3181831 5166063 Gura_2741 Geobacter uraniireducens Rf4 hypothetical protein YP_001231488.1 3180152 R 351605 CDS YP_001231489.1 148264783 5166064 complement(3182036..3182998) 1 NC_009483.1 SMART: TIR protein; TIR protein 3182998 5166064 Gura_2742 Geobacter uraniireducens Rf4 TIR protein YP_001231489.1 3182036 R 351605 CDS YP_001231490.1 148264784 5165192 complement(3183932..3186721) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 3186721 5165192 Gura_2743 Geobacter uraniireducens Rf4 PAS/PAC sensor hybrid histidine kinase YP_001231490.1 3183932 R 351605 CDS YP_001231491.1 148264785 5165193 3186995..3187423 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 3187423 5165193 Gura_2744 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001231491.1 3186995 D 351605 CDS YP_001231492.1 148264786 5166802 3187420..3188250 1 NC_009483.1 hypothetical protein 3188250 5166802 Gura_2745 Geobacter uraniireducens Rf4 hypothetical protein YP_001231492.1 3187420 D 351605 CDS YP_001231493.1 148264787 5166803 complement(3188321..3188992) 1 NC_009483.1 hypothetical protein 3188992 5166803 Gura_2746 Geobacter uraniireducens Rf4 hypothetical protein YP_001231493.1 3188321 R 351605 CDS YP_001231494.1 148264788 5166804 3189214..3189636 1 NC_009483.1 hypothetical protein 3189636 5166804 Gura_2747 Geobacter uraniireducens Rf4 hypothetical protein YP_001231494.1 3189214 D 351605 CDS YP_001231495.1 148264789 5166262 complement(3189998..3194803) 1 NC_009483.1 hypothetical protein 3194803 5166262 Gura_2748 Geobacter uraniireducens Rf4 hypothetical protein YP_001231495.1 3189998 R 351605 CDS YP_001231496.1 148264790 5166263 complement(3194903..3195715) 1 NC_009483.1 hypothetical protein 3195715 5166263 Gura_2749 Geobacter uraniireducens Rf4 hypothetical protein YP_001231496.1 3194903 R 351605 CDS YP_001231497.1 148264791 5166264 complement(3196204..3196491) 1 NC_009483.1 hypothetical protein 3196491 5166264 Gura_2750 Geobacter uraniireducens Rf4 hypothetical protein YP_001231497.1 3196204 R 351605 CDS YP_001231498.1 148264792 5164118 complement(3196850..3198208) 1 NC_009483.1 PFAM: magnesium chelatase, ChlI subunit; response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 3198208 5164118 Gura_2751 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001231498.1 3196850 R 351605 CDS YP_001231499.1 148264793 5164119 complement(3198195..3199577) 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; histidine kinase 3199577 5164119 Gura_2752 Geobacter uraniireducens Rf4 histidine kinase YP_001231499.1 3198195 R 351605 CDS YP_001231500.1 148264794 5164120 complement(3199673..3200551) 1 NC_009483.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein 3200551 5164120 Gura_2753 Geobacter uraniireducens Rf4 phosphonate ABC transporter periplasmic phosphonate-binding protein YP_001231500.1 3199673 R 351605 CDS YP_001231501.1 148264795 5166209 complement(3200599..3202353) 1 NC_009483.1 hypothetical protein 3202353 5166209 Gura_2754 Geobacter uraniireducens Rf4 hypothetical protein YP_001231501.1 3200599 R 351605 CDS YP_001231502.1 148264796 5166210 complement(3202350..3203393) 1 NC_009483.1 PFAM: NHL repeat containing protein; SMP-30/Gluconolaconase/LRE domain protein; NHL repeat-containing protein 3203393 5166210 Gura_2755 Geobacter uraniireducens Rf4 NHL repeat-containing protein YP_001231502.1 3202350 R 351605 CDS YP_001231503.1 148264797 5166211 complement(3203541..3205526) 1 NC_009483.1 hypothetical protein 3205526 5166211 Gura_2756 Geobacter uraniireducens Rf4 hypothetical protein YP_001231503.1 3203541 R 351605 CDS YP_001231504.1 148264798 5163378 complement(3205539..3206144) 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 3206144 5163378 Gura_2757 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001231504.1 3205539 R 351605 CDS YP_001231505.1 148264799 5163379 complement(3206147..3207337) 1 NC_009483.1 PFAM: NHL repeat containing protein; NHL repeat-containing protein 3207337 5163379 Gura_2758 Geobacter uraniireducens Rf4 NHL repeat-containing protein YP_001231505.1 3206147 R 351605 CDS YP_001231506.1 148264800 5163380 complement(3207558..3208907) 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 3208907 5163380 Gura_2759 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001231506.1 3207558 R 351605 CDS YP_001231507.1 148264801 5163442 complement(3209557..3210309) 1 NC_009483.1 TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; cobalt ABC transporter ATPase 3210309 5163442 Gura_2760 Geobacter uraniireducens Rf4 cobalt ABC transporter ATPase YP_001231507.1 3209557 R 351605 CDS YP_001231508.1 148264802 5163443 complement(3210306..3211118) 1 NC_009483.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; cobalt ABC transporter inner membrane protein CbiQ 3211118 5163443 Gura_2761 Geobacter uraniireducens Rf4 cobalt ABC transporter inner membrane protein CbiQ YP_001231508.1 3210306 R 351605 CDS YP_001231509.1 148264803 5163444 complement(3211196..3212242) 1 NC_009483.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; cobalamin (vitamin B12) biosynthesis CbiM protein 3212242 5163444 Gura_2762 Geobacter uraniireducens Rf4 cobalamin (vitamin B12) biosynthesis CbiM protein YP_001231509.1 3211196 R 351605 CDS YP_001231510.1 148264804 5166546 3213232..3214161 1 NC_009483.1 phosphate/phosphonate ABC transporter periplasmic component-like protein 3214161 5166546 Gura_2763 Geobacter uraniireducens Rf4 phosphate/phosphonate ABC transporter periplasmic component-like protein YP_001231510.1 3213232 D 351605 CDS YP_001231511.1 148264805 5166547 3214168..3214713 1 NC_009483.1 hypothetical protein 3214713 5166547 Gura_2764 Geobacter uraniireducens Rf4 hypothetical protein YP_001231511.1 3214168 D 351605 CDS YP_001231512.1 148264806 5166548 3214716..3215780 1 NC_009483.1 hypothetical protein 3215780 5166548 Gura_2765 Geobacter uraniireducens Rf4 hypothetical protein YP_001231512.1 3214716 D 351605 CDS YP_001231513.1 148264807 5164650 complement(3215820..3217109) 1 NC_009483.1 PFAM: major facilitator superfamily MFS_1; major facilitator transporter 3217109 5164650 Gura_2766 Geobacter uraniireducens Rf4 major facilitator transporter YP_001231513.1 3215820 R 351605 CDS YP_001231514.1 148264808 5164651 complement(3217106..3218086) 1 NC_009483.1 SMART: Parallel beta-helix repeat; parallel beta-helix repeat-containing protein 3218086 5164651 Gura_2767 Geobacter uraniireducens Rf4 parallel beta-helix repeat-containing protein YP_001231514.1 3217106 R 351605 CDS YP_001231515.1 148264809 5164652 complement(3218086..3218649) 1 NC_009483.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein 3218649 5164652 Gura_2768 Geobacter uraniireducens Rf4 TPR repeat-containing protein YP_001231515.1 3218086 R 351605 CDS YP_001231516.1 148264810 5163034 complement(3218646..3219470) 1 NC_009483.1 PFAM: cytochrome c biogenesis protein, transmembrane region; high-affinity nickel-transporter; high-affinity nickel-transporter 3219470 5163034 Gura_2769 Geobacter uraniireducens Rf4 high-affinity nickel-transporter YP_001231516.1 3218646 R 351605 CDS YP_001231517.1 148264811 5163035 complement(3219457..3220374) 1 NC_009483.1 hypothetical protein 3220374 5163035 Gura_2770 Geobacter uraniireducens Rf4 hypothetical protein YP_001231517.1 3219457 R 351605 CDS YP_001231518.1 148264812 5163036 complement(3220511..3221218) 1 NC_009483.1 hypothetical protein 3221218 5163036 Gura_2771 Geobacter uraniireducens Rf4 hypothetical protein YP_001231518.1 3220511 R 351605 CDS YP_001231519.1 148264813 5162891 complement(3221215..3223776) 1 NC_009483.1 SMART: Parallel beta-helix repeat; parallel beta-helix repeat-containing protein 3223776 5162891 Gura_2772 Geobacter uraniireducens Rf4 parallel beta-helix repeat-containing protein YP_001231519.1 3221215 R 351605 CDS YP_001231520.1 148264814 5162892 complement(3223917..3224372) 1 NC_009483.1 hypothetical protein 3224372 5162892 Gura_2773 Geobacter uraniireducens Rf4 hypothetical protein YP_001231520.1 3223917 R 351605 CDS YP_001231521.1 148264815 5162893 complement(3224369..3224953) 1 NC_009483.1 hypothetical protein 3224953 5162893 Gura_2774 Geobacter uraniireducens Rf4 hypothetical protein YP_001231521.1 3224369 R 351605 CDS YP_001231522.1 148264816 5166908 complement(3224958..3226376) 1 NC_009483.1 PFAM: Polysulphide reductase, NrfD; polysulfide reductase NrfD 3226376 5166908 Gura_2775 Geobacter uraniireducens Rf4 polysulfide reductase NrfD YP_001231522.1 3224958 R 351605 CDS YP_001231523.1 148264817 5166909 complement(3226369..3227073) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 3227073 5166909 Gura_2776 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001231523.1 3226369 R 351605 CDS YP_001231524.1 148264818 5166910 complement(3227315..3229510) 1 NC_009483.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; nitrate reductase 3229510 5166910 Gura_2777 Geobacter uraniireducens Rf4 nitrate reductase YP_001231524.1 3227315 R 351605 CDS YP_001231525.1 148264819 5166941 complement(3229705..3230220) 1 NC_009483.1 hypothetical protein 3230220 5166941 Gura_2778 Geobacter uraniireducens Rf4 hypothetical protein YP_001231525.1 3229705 R 351605 CDS YP_001231526.1 148264820 5166942 complement(3230567..3232267) 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3232267 5166942 Gura_2779 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001231526.1 3230567 R 351605 CDS YP_001231527.1 148264821 5166943 complement(3232632..3233312) 1 NC_009483.1 PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator 3233312 5166943 Gura_2780 Geobacter uraniireducens Rf4 two component LuxR family transcriptional regulator YP_001231527.1 3232632 R 351605 CDS YP_001231528.1 148264822 5166552 complement(3233369..3236062) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase 3236062 5166552 Gura_2781 Geobacter uraniireducens Rf4 PAS/PAC sensor hybrid histidine kinase YP_001231528.1 3233369 R 351605 CDS YP_001231529.1 148264823 5166553 complement(3236430..3237074) 1 NC_009483.1 PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; two component LuxR family transcriptional regulator 3237074 5166553 Gura_2782 Geobacter uraniireducens Rf4 two component LuxR family transcriptional regulator YP_001231529.1 3236430 R 351605 CDS YP_001231530.1 148264824 5166554 complement(3237150..3238691) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, dimerisation and phosphoacceptor region; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 3238691 5166554 Gura_2783 Geobacter uraniireducens Rf4 PAS/PAC sensor signal transduction histidine kinase YP_001231530.1 3237150 R 351605 CDS YP_001231531.1 148264825 5167084 3239202..3240197 1 NC_009483.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; TRAP dicarboxylate transporter subunit DctP 3240197 5167084 Gura_2784 Geobacter uraniireducens Rf4 TRAP dicarboxylate transporter subunit DctP YP_001231531.1 3239202 D 351605 CDS YP_001231532.1 148264826 5167085 3240322..3241608 1 NC_009483.1 transposase 3241608 5167085 Gura_2785 Geobacter uraniireducens Rf4 transposase YP_001231532.1 3240322 D 351605 CDS YP_001231533.1 148264827 5167086 3241877..3242545 1 NC_009483.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 3242545 5167086 Gura_2786 Geobacter uraniireducens Rf4 tripartite ATP-independent periplasmic transporter DctQ YP_001231533.1 3241877 D 351605 CDS YP_001231534.1 148264828 5166447 3242542..3243921 1 NC_009483.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM 3243921 5166447 Gura_2787 Geobacter uraniireducens Rf4 TRAP dicarboxylate transporter subunit DctM YP_001231534.1 3242542 D 351605 CDS YP_001231535.1 148264829 5166448 3244390..3245676 1 NC_009483.1 PFAM: Citrate transporter; citrate transporter 3245676 5166448 Gura_2788 Geobacter uraniireducens Rf4 citrate transporter YP_001231535.1 3244390 D 351605 CDS YP_001231536.1 148264830 5166449 complement(3245968..3246960) 1 NC_009483.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 3246960 5166449 Gura_2789 Geobacter uraniireducens Rf4 NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase YP_001231536.1 3245968 R 351605 CDS YP_001231537.1 148264831 5163046 complement(3247007..3248854) 1 NC_009483.1 PFAM: carbon starvation protein CstA; carbon starvation protein CstA 3248854 5163046 Gura_2790 Geobacter uraniireducens Rf4 carbon starvation protein CstA YP_001231537.1 3247007 R 351605 CDS YP_001231538.1 148264832 5163047 complement(3249345..3250097) 1 NC_009483.1 PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator 3250097 5163047 Gura_2791 Geobacter uraniireducens Rf4 LytTR family two component transcriptional regulator YP_001231538.1 3249345 R 351605 CDS YP_001231539.1 148264833 5163048 complement(3250094..3251788) 1 NC_009483.1 PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type, transmembrane region; signal transduction histidine kinase LytS 3251788 5163048 Gura_2792 Geobacter uraniireducens Rf4 signal transduction histidine kinase LytS YP_001231539.1 3250094 R 351605 CDS YP_001231540.1 148264834 5166899 complement(3252213..3252914) 1 NC_009483.1 hypothetical protein 3252914 5166899 Gura_2793 Geobacter uraniireducens Rf4 hypothetical protein YP_001231540.1 3252213 R 351605 CDS YP_001231541.1 148264835 5166900 complement(3252907..3254043) 1 NC_009483.1 PFAM: SMC domain protein; SMC domain-containing protein 3254043 5166900 Gura_2794 Geobacter uraniireducens Rf4 SMC domain-containing protein YP_001231541.1 3252907 R 351605 CDS YP_001231542.1 148264836 5162642 complement(3256576..3257304) 1 NC_009483.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; RNA methyltransferase 3257304 5162642 Gura_2796 Geobacter uraniireducens Rf4 RNA methyltransferase YP_001231542.1 3256576 R 351605 CDS YP_001231543.1 148264837 5166495 complement(3257373..3258098) 1 NC_009483.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 3258098 5166495 Gura_2797 Geobacter uraniireducens Rf4 orotidine 5'-phosphate decarboxylase YP_001231543.1 3257373 R 351605 CDS YP_001231544.1 148264838 5166496 complement(3258223..3259980) 1 NC_009483.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 3259980 5166496 Gura_2798 Geobacter uraniireducens Rf4 prolyl-tRNA synthetase YP_001231544.1 3258223 R 351605 CDS YP_001231545.1 148264839 5166497 complement(3259992..3261050) 1 NC_009483.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 3261050 ispG 5166497 ispG Geobacter uraniireducens Rf4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_001231545.1 3259992 R 351605 CDS YP_001231546.1 148264840 5166661 complement(3261338..3262687) 1 NC_009483.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 3262687 5166661 Gura_2800 Geobacter uraniireducens Rf4 glutamate dehydrogenase YP_001231546.1 3261338 R 351605 CDS YP_001231547.1 148264841 5166662 3263000..3264412 1 NC_009483.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; RNA methyltransferase 3264412 5166662 Gura_2801 Geobacter uraniireducens Rf4 RNA methyltransferase YP_001231547.1 3263000 D 351605 CDS YP_001231548.1 148264842 5166663 complement(3264433..3265107) 1 NC_009483.1 hypothetical protein 3265107 5166663 Gura_2802 Geobacter uraniireducens Rf4 hypothetical protein YP_001231548.1 3264433 R 351605 CDS YP_001231549.1 148264843 5166640 complement(3265104..3266450) 1 NC_009483.1 TIGRFAM: metal dependent phophohydrolase; PFAM: histidine kinase, HAMP region domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 3266450 5166640 Gura_2803 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001231549.1 3265104 R 351605 CDS YP_001231550.1 148264844 5166641 3266838..3268220 1 NC_009483.1 PFAM: transposase, IS4 family protein; transposase, IS4 family protein 3268220 5166641 Gura_2804 Geobacter uraniireducens Rf4 transposase, IS4 family protein YP_001231550.1 3266838 D 351605 CDS YP_001231551.1 148264845 5166642 complement(3268451..3269317) 1 NC_009483.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; 2-hydroxy-3-oxopropionate reductase 3269317 5166642 Gura_2805 Geobacter uraniireducens Rf4 2-hydroxy-3-oxopropionate reductase YP_001231551.1 3268451 R 351605 CDS YP_001231552.1 148264846 5166272 complement(3269430..3270086) 1 NC_009483.1 PFAM: HhH-GPD family protein; DNA-(apurinic or apyrimidinic site) lyase 3270086 5166272 Gura_2806 Geobacter uraniireducens Rf4 DNA-(apurinic or apyrimidinic site) lyase YP_001231552.1 3269430 R 351605 CDS YP_001231553.1 148264847 5166273 complement(3270083..3270313) 1 NC_009483.1 hypothetical protein 3270313 5166273 Gura_2807 Geobacter uraniireducens Rf4 hypothetical protein YP_001231553.1 3270083 R 351605 CDS YP_001231554.1 148264848 5166274 3270533..3271399 1 NC_009483.1 PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; phosphotransferase domain-containing protein 3271399 5166274 Gura_2808 Geobacter uraniireducens Rf4 phosphotransferase domain-containing protein YP_001231554.1 3270533 D 351605 CDS YP_001231555.1 148264849 5164850 complement(3271469..3272290) 1 NC_009483.1 PFAM: transport-associated protein; transport-associated protein 3272290 5164850 Gura_2809 Geobacter uraniireducens Rf4 transport-associated protein YP_001231555.1 3271469 R 351605 CDS YP_001231556.1 148264850 5164851 3272408..3273004 1 NC_009483.1 S-isoprenylcysteine methyltransferase-like protein 3273004 5164851 Gura_2810 Geobacter uraniireducens Rf4 S-isoprenylcysteine methyltransferase-like protein YP_001231556.1 3272408 D 351605 CDS YP_001231557.1 148264851 5164852 complement(3273085..3273768) 1 NC_009483.1 PFAM: MgtC/SapB transporter; MgtC/SapB transporter 3273768 5164852 Gura_2811 Geobacter uraniireducens Rf4 MgtC/SapB transporter YP_001231557.1 3273085 R 351605 CDS YP_001231558.1 148264852 5164821 complement(3273860..3274777) 1 NC_009483.1 hypothetical protein 3274777 5164821 Gura_2812 Geobacter uraniireducens Rf4 hypothetical protein YP_001231558.1 3273860 R 351605 CDS YP_001231559.1 148264853 5164822 complement(3274793..3275704) 1 NC_009483.1 hypothetical protein 3275704 5164822 Gura_2813 Geobacter uraniireducens Rf4 hypothetical protein YP_001231559.1 3274793 R 351605 CDS YP_001231560.1 148264854 5164823 complement(3275701..3276810) 1 NC_009483.1 PFAM: Sporulation domain protein; sporulation domain-containing protein 3276810 5164823 Gura_2814 Geobacter uraniireducens Rf4 sporulation domain-containing protein YP_001231560.1 3275701 R 351605 CDS YP_001231561.1 148264855 5167010 complement(3276969..3279062) 1 NC_009483.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 3279062 5167010 Gura_2815 Geobacter uraniireducens Rf4 elongation factor G YP_001231561.1 3276969 R 351605 CDS YP_001231562.1 148264856 5167011 complement(3279137..3279907) 1 NC_009483.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 3279907 5167011 Gura_2816 Geobacter uraniireducens Rf4 pantothenate kinase YP_001231562.1 3279137 R 351605 CDS YP_001231563.1 148264857 5167012 complement(3280045..3281055) 1 NC_009483.1 TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; Helix-turn-helix, type 11 domain protein; biotin--acetyl-CoA-carboxylase ligase 3281055 5167012 Gura_2817 Geobacter uraniireducens Rf4 biotin--acetyl-CoA-carboxylase ligase YP_001231563.1 3280045 R 351605 CDS YP_001231564.1 148264858 5165730 complement(3281052..3281882) 1 NC_009483.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 3281882 5165730 Gura_2818 Geobacter uraniireducens Rf4 nicotinate-nucleotide pyrophosphorylase YP_001231564.1 3281052 R 351605 CDS YP_001231565.1 148264859 5165731 3282084..3283400 1 NC_009483.1 PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; diguanylate cyclase 3283400 5165731 Gura_2819 Geobacter uraniireducens Rf4 diguanylate cyclase YP_001231565.1 3282084 D 351605 CDS YP_001231566.1 148264860 5165732 3283397..3283951 1 NC_009483.1 hypothetical protein 3283951 5165732 Gura_2820 Geobacter uraniireducens Rf4 hypothetical protein YP_001231566.1 3283397 D 351605 CDS YP_001231567.1 148264861 5165754 complement(3283959..3284495) 1 NC_009483.1 hypothetical protein 3284495 5165754 Gura_2821 Geobacter uraniireducens Rf4 hypothetical protein YP_001231567.1 3283959 R 351605 CDS YP_001231568.1 148264862 5165755 3284652..3285674 1 NC_009483.1 hypothetical protein 3285674 5165755 Gura_2822 Geobacter uraniireducens Rf4 hypothetical protein YP_001231568.1 3284652 D 351605 CDS YP_001231569.1 148264863 5165756 3285828..3286910 1 NC_009483.1 hypothetical protein 3286910 5165756 Gura_2823 Geobacter uraniireducens Rf4 hypothetical protein YP_001231569.1 3285828 D 351605 CDS YP_001231570.1 148264864 5164668 complement(3286967..3288424) 1 NC_009483.1 PFAM: Heat shock protein 70; 2-alkenal reductase 3288424 5164668 Gura_2824 Geobacter uraniireducens Rf4 2-alkenal reductase YP_001231570.1 3286967 R 351605 CDS YP_001231571.1 148264865 5164669 complement(3288412..3288639) 1 NC_009483.1 PFAM: gas vesicle protein GVPa; gas vesicle protein GvpA 3288639 5164669 Gura_2825 Geobacter uraniireducens Rf4 gas vesicle protein GvpA YP_001231571.1 3288412 R 351605 CDS YP_001231572.1 148264866 5164670 complement(3288648..3289397) 1 NC_009483.1 PFAM: Gas vesicle synthesis GvpLGvpF; gas vesicle synthesis GvpLGvpF 3289397 5164670 Gura_2826 Geobacter uraniireducens Rf4 gas vesicle synthesis GvpLGvpF YP_001231572.1 3288648 R 351605 CDS YP_001231573.1 148264867 5162949 complement(3289387..3289677) 1 NC_009483.1 hypothetical protein 3289677 5162949 Gura_2827 Geobacter uraniireducens Rf4 hypothetical protein YP_001231573.1 3289387 R 351605 CDS YP_001231574.1 148264868 5162950 complement(3289693..3290058) 1 NC_009483.1 PFAM: gas vesicle protein GVPa; gas vesicle protein GvpA 3290058 5162950 Gura_2828 Geobacter uraniireducens Rf4 gas vesicle protein GvpA YP_001231574.1 3289693 R 351605 CDS YP_001231575.1 148264869 5162951 complement(3290404..3292317) 1 NC_009483.1 TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; arsenite-activated ATPase ArsA 3292317 5162951 Gura_2829 Geobacter uraniireducens Rf4 arsenite-activated ATPase ArsA YP_001231575.1 3290404 R 351605 CDS YP_001231576.1 148264870 5165706 complement(3292369..3292632) 1 NC_009483.1 hypothetical protein 3292632 5165706 Gura_2830 Geobacter uraniireducens Rf4 hypothetical protein YP_001231576.1 3292369 R 351605 CDS YP_001231577.1 148264871 5165707 complement(3292668..3292907) 1 NC_009483.1 PFAM: Gas vesicle G; gas vesicle protein G 3292907 5165707 Gura_2831 Geobacter uraniireducens Rf4 gas vesicle protein G YP_001231577.1 3292668 R 351605 CDS YP_001231578.1 148264872 5165708 complement(3292904..3293878) 1 NC_009483.1 PFAM: heat shock protein DnaJ domain protein; Gas vesicle synthesis GvpLGvpF; gas vesicle synthesis GvpLGvpF 3293878 5165708 Gura_2832 Geobacter uraniireducens Rf4 gas vesicle synthesis GvpLGvpF YP_001231578.1 3292904 R 351605 CDS YP_001231579.1 148264873 5163463 complement(3293889..3294440) 1 NC_009483.1 PFAM: heat shock protein Hsp20; heat shock protein Hsp20 3294440 5163463 Gura_2833 Geobacter uraniireducens Rf4 heat shock protein Hsp20 YP_001231579.1 3293889 R 351605 CDS YP_001231580.1 148264874 5163464 complement(3294468..3295217) 1 NC_009483.1 PFAM: Gas vesicle synthesis GvpLGvpF; gas vesicle synthesis GvpLGvpF 3295217 5163464 Gura_2834 Geobacter uraniireducens Rf4 gas vesicle synthesis GvpLGvpF YP_001231580.1 3294468 R 351605 CDS YP_001231581.1 148264875 5163465 complement(3295343..3295660) 1 NC_009483.1 hypothetical protein 3295660 5163465 Gura_2835 Geobacter uraniireducens Rf4 hypothetical protein YP_001231581.1 3295343 R 351605 CDS YP_001231582.1 148264876 5165528 complement(3295687..3296709) 1 NC_009483.1 TIGRFAM: gas vesicle protein GvpN; PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; gas vesicle protein GvpN 3296709 5165528 Gura_2836 Geobacter uraniireducens Rf4 gas vesicle protein GvpN YP_001231582.1 3295687 R 351605 CDS YP_001231583.1 148264877 5165529 complement(3297095..3297430) 1 NC_009483.1 hypothetical protein 3297430 5165529 Gura_2837 Geobacter uraniireducens Rf4 hypothetical protein YP_001231583.1 3297095 R 351605 CDS YP_001231584.1 148264878 5165530 complement(3297458..3298105) 1 NC_009483.1 hypothetical protein 3298105 5165530 Gura_2838 Geobacter uraniireducens Rf4 hypothetical protein YP_001231584.1 3297458 R 351605 CDS YP_001231585.1 148264879 5165150 complement(3298254..3298472) 1 NC_009483.1 involved in formation of gas vesicle which are protein structures that contain gas involved in buoyancy; part of an operon of other gas vesicle synthesis proteins; gas vesicle synthesis protein GvpA 3298472 5165150 Gura_2839 Geobacter uraniireducens Rf4 gas vesicle synthesis protein GvpA YP_001231585.1 3298254 R 351605 CDS YP_001231586.1 148264880 5165151 complement(3298727..3300187) 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 3300187 5165151 Gura_2840 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001231586.1 3298727 R 351605 CDS YP_001231587.1 148264881 5165152 complement(3300174..3301229) 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; nitrogen-specific signal transduction histidine kinase NtrB 3301229 5165152 Gura_2841 Geobacter uraniireducens Rf4 nitrogen-specific signal transduction histidine kinase NtrB YP_001231587.1 3300174 R 351605 CDS YP_001231588.1 148264882 5164635 complement(3301516..3303621) 1 NC_009483.1 TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: AAA ATPase VAT domain protein; AAA ATPase, central domain protein; cell division protein 48, CDC48, domain 2; SMART: AAA ATPase; ATPase AAA 3303621 5164635 Gura_2842 Geobacter uraniireducens Rf4 ATPase AAA YP_001231588.1 3301516 R 351605 CDS YP_001231589.1 148264883 5164636 complement(3303906..3304487) 1 NC_009483.1 hypothetical protein 3304487 5164636 Gura_2843 Geobacter uraniireducens Rf4 hypothetical protein YP_001231589.1 3303906 R 351605 CDS YP_001231590.1 148264884 5164637 complement(3304491..3304763) 1 NC_009483.1 hypothetical protein 3304763 5164637 Gura_2844 Geobacter uraniireducens Rf4 hypothetical protein YP_001231590.1 3304491 R 351605 CDS YP_001231591.1 148264885 5163298 complement(3305095..3306744) 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3306744 5163298 Gura_2845 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001231591.1 3305095 R 351605 CDS YP_001231592.1 148264886 5163299 3306942..3307544 1 NC_009483.1 PFAM: flavin reductase domain protein, FMN-binding; flavin reductase domain-containing protein 3307544 5163299 Gura_2846 Geobacter uraniireducens Rf4 flavin reductase domain-containing protein YP_001231592.1 3306942 D 351605 CDS YP_001231593.1 148264887 5163300 complement(3307727..3308425) 1 NC_009483.1 spermidine synthase-like protein 3308425 5163300 Gura_2847 Geobacter uraniireducens Rf4 spermidine synthase-like protein YP_001231593.1 3307727 R 351605 CDS YP_001231594.1 148264888 5163573 complement(3308490..3308975) 1 NC_009483.1 hypothetical protein 3308975 5163573 Gura_2848 Geobacter uraniireducens Rf4 hypothetical protein YP_001231594.1 3308490 R 351605 CDS YP_001231595.1 148264889 5163574 complement(3309472..3310092) 1 NC_009483.1 PFAM: Haloacid dehalogenase domain protein hydrolase; hydrolase 3310092 5163574 Gura_2849 Geobacter uraniireducens Rf4 hydrolase YP_001231595.1 3309472 R 351605 CDS YP_001231596.1 148264890 5163575 complement(3310177..3310494) 1 NC_009483.1 PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 3310494 5163575 Gura_2850 Geobacter uraniireducens Rf4 HNH endonuclease YP_001231596.1 3310177 R 351605 CDS YP_001231597.1 148264891 5163329 complement(3310587..3311030) 1 NC_009483.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 3311030 rnhA 5163329 rnhA Geobacter uraniireducens Rf4 ribonuclease H YP_001231597.1 3310587 R 351605 CDS YP_001231598.1 148264892 5163330 complement(3311020..3311673) 1 NC_009483.1 PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 3311673 5163330 Gura_2852 Geobacter uraniireducens Rf4 phospholipid/glycerol acyltransferase YP_001231598.1 3311020 R 351605 CDS YP_001231599.1 148264893 5163331 complement(3311789..3313525) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 3313525 5163331 Gura_2853 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001231599.1 3311789 R 351605 CDS YP_001231600.1 148264894 5162769 complement(3313587..3314600) 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 3314600 5162769 Gura_2854 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001231600.1 3313587 R 351605 CDS YP_001231601.1 148264895 5162770 3315489..3315641 1 NC_009483.1 hypothetical protein 3315641 5162770 Gura_2855 Geobacter uraniireducens Rf4 hypothetical protein YP_001231601.1 3315489 D 351605 CDS YP_001231602.1 148264896 5162771 complement(3315722..3316852) 1 NC_009483.1 glycosyltransferase-like protein 3316852 5162771 Gura_2856 Geobacter uraniireducens Rf4 glycosyltransferase-like protein YP_001231602.1 3315722 R 351605 CDS YP_001231603.1 148264897 5162792 complement(3316871..3317971) 1 NC_009483.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; rod shape-determining protein RodA 3317971 5162792 Gura_2857 Geobacter uraniireducens Rf4 rod shape-determining protein RodA YP_001231603.1 3316871 R 351605 CDS YP_001231604.1 148264898 5162793 complement(3317986..3319896) 1 NC_009483.1 PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; peptidoglycan glycosyltransferase 3319896 5162793 Gura_2858 Geobacter uraniireducens Rf4 peptidoglycan glycosyltransferase YP_001231604.1 3317986 R 351605 CDS YP_001231605.1 148264899 5162794 complement(3319893..3320381) 1 NC_009483.1 hypothetical protein 3320381 5162794 Gura_2859 Geobacter uraniireducens Rf4 hypothetical protein YP_001231605.1 3319893 R 351605 CDS YP_001231606.1 148264900 5162748 complement(3320374..3321198) 1 NC_009483.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 3321198 5162748 Gura_2860 Geobacter uraniireducens Rf4 rod shape-determining protein MreC YP_001231606.1 3320374 R 351605 CDS YP_001231607.1 148264901 5162749 complement(3321279..3321767) 1 NC_009483.1 dTDP-4-dehydrorhamnose 3 5-epimerase-like protein 3321767 5162749 Gura_2861 Geobacter uraniireducens Rf4 dTDP-4-dehydrorhamnose 3 5-epimerase-like protein YP_001231607.1 3321279 R 351605 CDS YP_001231608.1 148264902 5162750 complement(3321764..3322669) 1 NC_009483.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase 3322669 5162750 Gura_2862 Geobacter uraniireducens Rf4 glucose-1-phosphate thymidylyltransferase YP_001231608.1 3321764 R 351605 CDS YP_001231609.1 148264903 5164530 complement(3322922..3323491) 1 NC_009483.1 TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; D,D-heptose 1,7-bisphosphate phosphatase 3323491 5164530 Gura_2863 Geobacter uraniireducens Rf4 D,D-heptose 1,7-bisphosphate phosphatase YP_001231609.1 3322922 R 351605 CDS YP_001231610.1 148264904 5164531 complement(3323690..3324259) 1 NC_009483.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 3324259 5164531 Gura_2864 Geobacter uraniireducens Rf4 phosphoheptose isomerase YP_001231610.1 3323690 R 351605 CDS YP_001231611.1 148264905 5164532 complement(3324256..3325293) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 3325293 5164532 Gura_2865 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231611.1 3324256 R 351605 CDS YP_001231612.1 148264906 5164347 complement(3325449..3326492) 1 NC_009483.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; rod shape-determining protein MreB 3326492 5164347 Gura_2866 Geobacter uraniireducens Rf4 rod shape-determining protein MreB YP_001231612.1 3325449 R 351605 CDS YP_001231613.1 148264907 5164348 3326718..3328295 1 NC_009483.1 hypothetical protein 3328295 5164348 Gura_2867 Geobacter uraniireducens Rf4 hypothetical protein YP_001231613.1 3326718 D 351605 CDS YP_001231614.1 148264908 5164349 3328464..3329354 1 NC_009483.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 3329354 5164349 Gura_2868 Geobacter uraniireducens Rf4 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_001231614.1 3328464 D 351605 CDS YP_001231615.1 148264909 5164915 complement(3329455..3330813) 1 NC_009483.1 TIGRFAM: integron integrase; PFAM: phage integrase family protein; integron integrase 3330813 5164915 Gura_2869 Geobacter uraniireducens Rf4 integron integrase YP_001231615.1 3329455 R 351605 CDS YP_001231616.1 148264910 5164916 3330987..3331373 1 NC_009483.1 hypothetical protein 3331373 5164916 Gura_2870 Geobacter uraniireducens Rf4 hypothetical protein YP_001231616.1 3330987 D 351605 CDS YP_001231617.1 148264911 5164917 3331529..3332704 1 NC_009483.1 PFAM: putative transposase; putative transposase 3332704 5164917 Gura_2871 Geobacter uraniireducens Rf4 putative transposase YP_001231617.1 3331529 D 351605 CDS YP_001231618.1 148264912 5164885 3333223..3334062 1 NC_009483.1 PFAM: phage integrase family protein; phage integrase family protein 3334062 5164885 Gura_2872 Geobacter uraniireducens Rf4 phage integrase family protein YP_001231618.1 3333223 D 351605 CDS YP_001231619.1 148264913 5164886 3334065..3334634 1 NC_009483.1 hypothetical protein 3334634 5164886 Gura_2873 Geobacter uraniireducens Rf4 hypothetical protein YP_001231619.1 3334065 D 351605 CDS YP_001231620.1 148264914 5164887 complement(3334679..3335416) 1 NC_009483.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; IstB ATP binding domain-containing protein 3335416 5164887 Gura_2874 Geobacter uraniireducens Rf4 IstB ATP binding domain-containing protein YP_001231620.1 3334679 R 351605 CDS YP_001231621.1 148264915 5164431 complement(3335403..3336923) 1 NC_009483.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 3336923 5164431 Gura_2875 Geobacter uraniireducens Rf4 integrase catalytic subunit YP_001231621.1 3335403 R 351605 CDS YP_001231622.1 148264916 5164432 3336972..3337619 1 NC_009483.1 PFAM: putative transposase; putative transposase 3337619 5164432 Gura_2876 Geobacter uraniireducens Rf4 putative transposase YP_001231622.1 3336972 D 351605 CDS YP_001231623.1 148264917 5164433 3337938..3338558 1 NC_009483.1 hypothetical protein 3338558 5164433 Gura_2877 Geobacter uraniireducens Rf4 hypothetical protein YP_001231623.1 3337938 D 351605 CDS YP_001231624.1 148264918 5164006 3339248..3340489 1 NC_009483.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 3340489 5164006 Gura_2879 Geobacter uraniireducens Rf4 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001231624.1 3339248 D 351605 CDS YP_001231625.1 148264919 5164007 3342222..3342848 1 NC_009483.1 hypothetical protein 3342848 5164007 Gura_2880 Geobacter uraniireducens Rf4 hypothetical protein YP_001231625.1 3342222 D 351605 CDS YP_001231626.1 148264920 5166301 3342885..3343235 1 NC_009483.1 hypothetical protein 3343235 5166301 Gura_2881 Geobacter uraniireducens Rf4 hypothetical protein YP_001231626.1 3342885 D 351605 CDS YP_001231627.1 148264921 5166302 3343439..3344758 1 NC_009483.1 hypothetical protein 3344758 5166302 Gura_2882 Geobacter uraniireducens Rf4 hypothetical protein YP_001231627.1 3343439 D 351605 CDS YP_001231628.1 148264922 5166303 3344984..3345628 1 NC_009483.1 PFAM: Myosin, N-terminal, SH3 domain protein; myosin N-terminal SH3-like domain-containing protein 3345628 5166303 Gura_2883 Geobacter uraniireducens Rf4 myosin N-terminal SH3-like domain-containing protein YP_001231628.1 3344984 D 351605 CDS YP_001231629.1 148264923 5164879 3345891..3347105 1 NC_009483.1 PFAM: transposase, mutator type; transposase, mutator type 3347105 5164879 Gura_2884 Geobacter uraniireducens Rf4 transposase, mutator type YP_001231629.1 3345891 D 351605 CDS YP_001231630.1 148264924 5164880 3347255..3347551 1 NC_009483.1 PFAM: protein of unknown function DUF1568; hypothetical protein 3347551 5164880 Gura_2885 Geobacter uraniireducens Rf4 hypothetical protein YP_001231630.1 3347255 D 351605 CDS YP_001231631.1 148264925 5164881 complement(3347760..3348935) 1 NC_009483.1 PFAM: transposase, IS4 family protein; transposase, IS4 family protein 3348935 5164881 Gura_2886 Geobacter uraniireducens Rf4 transposase, IS4 family protein YP_001231631.1 3347760 R 351605 CDS YP_001231632.1 148264926 5162670 3349089..3349817 1 NC_009483.1 PFAM: protein of unknown function DUF1568; hypothetical protein 3349817 5162670 Gura_2887 Geobacter uraniireducens Rf4 hypothetical protein YP_001231632.1 3349089 D 351605 CDS YP_001231633.1 148264927 5162671 complement(3350002..3350505) 1 NC_009483.1 hypothetical protein 3350505 5162671 Gura_2888 Geobacter uraniireducens Rf4 hypothetical protein YP_001231633.1 3350002 R 351605 CDS YP_001231634.1 148264928 5162672 3350960..3352126 1 NC_009483.1 PFAM: Alkaline phosphatase; alkaline phosphatase 3352126 5162672 Gura_2889 Geobacter uraniireducens Rf4 alkaline phosphatase YP_001231634.1 3350960 D 351605 CDS YP_001231635.1 148264929 5166081 3352149..3353693 1 NC_009483.1 PFAM: protein of unknown function DUF1566; hypothetical protein 3353693 5166081 Gura_2890 Geobacter uraniireducens Rf4 hypothetical protein YP_001231635.1 3352149 D 351605 CDS YP_001231636.1 148264930 5166082 3353843..3355138 1 NC_009483.1 PFAM: peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 3355138 5166082 Gura_2891 Geobacter uraniireducens Rf4 peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase YP_001231636.1 3353843 D 351605 CDS YP_001231637.1 148264931 5166083 3355595..3356230 1 NC_009483.1 hypothetical protein 3356230 5166083 Gura_2892 Geobacter uraniireducens Rf4 hypothetical protein YP_001231637.1 3355595 D 351605 CDS YP_001231638.1 148264932 5163411 complement(3356263..3356610) 1 NC_009483.1 hypothetical protein 3356610 5163411 Gura_2893 Geobacter uraniireducens Rf4 hypothetical protein YP_001231638.1 3356263 R 351605 CDS YP_001231639.1 148264933 5163412 3356762..3357865 1 NC_009483.1 PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase 3357865 5163412 Gura_2894 Geobacter uraniireducens Rf4 FAD dependent oxidoreductase YP_001231639.1 3356762 D 351605 CDS YP_001231640.1 148264934 5163413 3357954..3359045 1 NC_009483.1 PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Glu/Leu/Phe/Val dehydrogenase 3359045 5163413 Gura_2895 Geobacter uraniireducens Rf4 Glu/Leu/Phe/Val dehydrogenase YP_001231640.1 3357954 D 351605 CDS YP_001231641.1 148264935 5164425 complement(3359030..3359713) 1 NC_009483.1 acyl-CoA synthetase 3359713 5164425 Gura_2896 Geobacter uraniireducens Rf4 acyl-CoA synthetase YP_001231641.1 3359030 R 351605 CDS YP_001231642.1 148264936 5164426 complement(3359710..3361065) 1 NC_009483.1 PFAM: CoA-binding domain protein; CoA-binding domain-containing protein 3361065 5164426 Gura_2897 Geobacter uraniireducens Rf4 CoA-binding domain-containing protein YP_001231642.1 3359710 R 351605 CDS YP_001231643.1 148264937 5164427 complement(3361189..3362361) 1 NC_009483.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; branched-chain alpha-keto acid dehydrogenase subunit E2 3362361 5164427 Gura_2898 Geobacter uraniireducens Rf4 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_001231643.1 3361189 R 351605 CDS YP_001231644.1 148264938 5163663 complement(3362561..3363523) 1 NC_009483.1 PFAM: Transketolase, central region; Transketolase domain protein; transketolase, central region 3363523 5163663 Gura_2899 Geobacter uraniireducens Rf4 transketolase, central region YP_001231644.1 3362561 R 351605 CDS YP_001231645.1 148264939 5163664 complement(3363525..3364580) 1 NC_009483.1 PFAM: dehydrogenase, E1 component; pyruvate dehydrogenase 3364580 5163664 Gura_2900 Geobacter uraniireducens Rf4 pyruvate dehydrogenase YP_001231645.1 3363525 R 351605 CDS YP_001231646.1 148264940 5163665 complement(3364693..3365142) 1 NC_009483.1 hypothetical protein 3365142 5163665 Gura_2901 Geobacter uraniireducens Rf4 hypothetical protein YP_001231646.1 3364693 R 351605 CDS YP_001231647.1 148264941 5164921 complement(3365147..3365560) 1 NC_009483.1 PFAM: Activator of Hsp90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein 3365560 5164921 Gura_2902 Geobacter uraniireducens Rf4 activator of Hsp90 ATPase 1 family protein YP_001231647.1 3365147 R 351605 CDS YP_001231648.1 148264942 5164922 complement(3365626..3366828) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; putative PAS/PAC sensor protein 3366828 5164922 Gura_2903 Geobacter uraniireducens Rf4 putative PAS/PAC sensor protein YP_001231648.1 3365626 R 351605 CDS YP_001231649.1 148264943 5164923 complement(3367014..3367811) 1 NC_009483.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 3367811 5164923 Gura_2904 Geobacter uraniireducens Rf4 hypothetical protein YP_001231649.1 3367014 R 351605 CDS YP_001231650.1 148264944 5163590 3368056..3370404 1 NC_009483.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; GAF domain protein; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; putative GAF sensor protein 3370404 5163590 Gura_2905 Geobacter uraniireducens Rf4 putative GAF sensor protein YP_001231650.1 3368056 D 351605 CDS YP_001231651.1 148264945 5163591 3370931..3371515 1 NC_009483.1 PFAM: LemA family protein; LemA family protein 3371515 5163591 Gura_2906 Geobacter uraniireducens Rf4 LemA family protein YP_001231651.1 3370931 D 351605 CDS YP_001231652.1 148264946 5163592 complement(3371578..3375024) 1 NC_009483.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 3375024 5163592 Gura_2907 Geobacter uraniireducens Rf4 pyruvate carboxylase YP_001231652.1 3371578 R 351605 CDS YP_001231653.1 148264947 5165223 3375282..3376307 1 NC_009483.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 3376307 5165223 Gura_2908 Geobacter uraniireducens Rf4 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001231653.1 3375282 D 351605 CDS YP_001231654.1 148264948 5165224 complement(3376599..3376814) 1 NC_009483.1 hypothetical protein 3376814 5165224 Gura_2909 Geobacter uraniireducens Rf4 hypothetical protein YP_001231654.1 3376599 R 351605 CDS YP_001231655.1 148264949 5165225 complement(3376829..3377344) 1 NC_009483.1 PFAM: Ferritin, Dps family protein; ferroxidase 3377344 5165225 Gura_2910 Geobacter uraniireducens Rf4 ferroxidase YP_001231655.1 3376829 R 351605 CDS YP_001231656.1 148264950 5165246 complement(3377480..3378994) 1 NC_009483.1 hypothetical protein 3378994 5165246 Gura_2911 Geobacter uraniireducens Rf4 hypothetical protein YP_001231656.1 3377480 R 351605 CDS YP_001231657.1 148264951 5165247 complement(3378998..3379765) 1 NC_009483.1 PFAM: band 7 protein; hypothetical protein 3379765 5165247 Gura_2912 Geobacter uraniireducens Rf4 hypothetical protein YP_001231657.1 3378998 R 351605 CDS YP_001231658.1 148264952 5165248 complement(3379847..3381118) 1 NC_009483.1 PFAM: protein of unknown function DUF107; hypothetical protein 3381118 5165248 Gura_2913 Geobacter uraniireducens Rf4 hypothetical protein YP_001231658.1 3379847 R 351605 CDS YP_001231659.1 148264953 5165781 3381235..3382614 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 3382614 5165781 Gura_2914 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001231659.1 3381235 D 351605 CDS YP_001231660.1 148264954 5165782 3383080..3384228 1 NC_009483.1 hypothetical protein 3384228 5165782 Gura_2915 Geobacter uraniireducens Rf4 hypothetical protein YP_001231660.1 3383080 D 351605 CDS YP_001231661.1 148264955 5165783 3384513..3384923 1 NC_009483.1 hypothetical protein 3384923 5165783 Gura_2916 Geobacter uraniireducens Rf4 hypothetical protein YP_001231661.1 3384513 D 351605 CDS YP_001231662.1 148264956 5166028 3384938..3385792 1 NC_009483.1 hypothetical protein 3385792 5166028 Gura_2917 Geobacter uraniireducens Rf4 hypothetical protein YP_001231662.1 3384938 D 351605 CDS YP_001231663.1 148264957 5166029 3385898..3387511 1 NC_009483.1 hypothetical protein 3387511 5166029 Gura_2918 Geobacter uraniireducens Rf4 hypothetical protein YP_001231663.1 3385898 D 351605 CDS YP_001231664.1 148264958 5166030 3387508..3387939 1 NC_009483.1 hypothetical protein 3387939 5166030 Gura_2919 Geobacter uraniireducens Rf4 hypothetical protein YP_001231664.1 3387508 D 351605 CDS YP_001231665.1 148264959 5166173 3388147..3390186 1 NC_009483.1 hypothetical protein 3390186 5166173 Gura_2920 Geobacter uraniireducens Rf4 hypothetical protein YP_001231665.1 3388147 D 351605 CDS YP_001231666.1 148264960 5166174 3390252..3390884 1 NC_009483.1 hypothetical protein 3390884 5166174 Gura_2921 Geobacter uraniireducens Rf4 hypothetical protein YP_001231666.1 3390252 D 351605 CDS YP_001231667.1 148264961 5166175 3390881..3392314 1 NC_009483.1 PFAM: AAA-4 family protein; putative transcriptional regulator 3392314 5166175 Gura_2922 Geobacter uraniireducens Rf4 putative transcriptional regulator YP_001231667.1 3390881 D 351605 CDS YP_001231668.1 148264962 5166631 complement(3392485..3392928) 1 NC_009483.1 PFAM: thioesterase superfamily protein; thioesterase superfamily protein 3392928 5166631 Gura_2923 Geobacter uraniireducens Rf4 thioesterase superfamily protein YP_001231668.1 3392485 R 351605 CDS YP_001231669.1 148264963 5166632 complement(3393169..3394473) 1 NC_009483.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 3394473 5166632 Gura_2924 Geobacter uraniireducens Rf4 RNA-directed DNA polymerase YP_001231669.1 3393169 R 351605 CDS YP_001231670.1 148264964 5166633 complement(3395209..3395988) 1 NC_009483.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; phage SPO1 DNA polymerase-like protein 3395988 5166633 Gura_2925 Geobacter uraniireducens Rf4 phage SPO1 DNA polymerase-like protein YP_001231670.1 3395209 R 351605 CDS YP_001231671.1 148264965 5163889 3396036..3396944 1 NC_009483.1 hypothetical protein 3396944 5163889 Gura_2926 Geobacter uraniireducens Rf4 hypothetical protein YP_001231671.1 3396036 D 351605 CDS YP_001231672.1 148264966 5163890 complement(3396967..3398178) 1 NC_009483.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 3398178 5163890 Gura_2927 Geobacter uraniireducens Rf4 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_001231672.1 3396967 R 351605 CDS YP_001231673.1 148264967 5163891 complement(3398189..3398944) 1 NC_009483.1 PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 3398944 5163891 Gura_2928 Geobacter uraniireducens Rf4 beta-lactamase domain-containing protein YP_001231673.1 3398189 R 351605 CDS YP_001231674.1 148264968 5166926 complement(3398964..3400064) 1 NC_009483.1 TIGRFAM: metal dependent phophohydrolase; PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 3400064 5166926 Gura_2929 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001231674.1 3398964 R 351605 CDS YP_001231675.1 148264969 5166927 complement(3400133..3401746) 1 NC_009483.1 hypothetical protein 3401746 5166927 Gura_2930 Geobacter uraniireducens Rf4 hypothetical protein YP_001231675.1 3400133 R 351605 CDS YP_001231676.1 148264970 5166928 complement(3401756..3402160) 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 3402160 5166928 Gura_2931 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001231676.1 3401756 R 351605 CDS YP_001231677.1 148264971 5162627 complement(3402282..3403466) 1 NC_009483.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; response regulator receiver sensor signal transduction histidine kinase 3403466 5162627 Gura_2932 Geobacter uraniireducens Rf4 response regulator receiver sensor signal transduction histidine kinase YP_001231677.1 3402282 R 351605 CDS YP_001231678.1 148264972 5162628 complement(3403628..3404071) 1 NC_009483.1 PFAM: UspA domain protein; UspA domain-containing protein 3404071 5162628 Gura_2933 Geobacter uraniireducens Rf4 UspA domain-containing protein YP_001231678.1 3403628 R 351605 CDS YP_001231679.1 148264973 5162629 complement(3404097..3404486) 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 3404486 5162629 Gura_2934 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001231679.1 3404097 R 351605 CDS YP_001231680.1 148264974 5165174 complement(3404555..3405283) 1 NC_009483.1 PFAM: GAF domain protein; putative GAF sensor protein 3405283 5165174 Gura_2935 Geobacter uraniireducens Rf4 putative GAF sensor protein YP_001231680.1 3404555 R 351605 CDS YP_001231681.1 148264975 5165175 complement(3405390..3406223) 1 NC_009483.1 SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 3406223 5165175 Gura_2936 Geobacter uraniireducens Rf4 helix-turn-helix domain-containing protein YP_001231681.1 3405390 R 351605 CDS YP_001231682.1 148264976 5165176 complement(3406229..3406975) 1 NC_009483.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein 3406975 5165176 Gura_2937 Geobacter uraniireducens Rf4 TPR repeat-containing protein YP_001231682.1 3406229 R 351605 CDS YP_001231683.1 148264977 5164133 complement(3407115..3408029) 1 NC_009483.1 PFAM: PfkB domain protein; ribokinase-like domain-containing protein 3408029 5164133 Gura_2938 Geobacter uraniireducens Rf4 ribokinase-like domain-containing protein YP_001231683.1 3407115 R 351605 CDS YP_001231684.1 148264978 5164134 complement(3408072..3409283) 1 NC_009483.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 3409283 rpsA 5164134 rpsA Geobacter uraniireducens Rf4 30S ribosomal protein S1 YP_001231684.1 3408072 R 351605 CDS YP_001231685.1 148264979 5164135 3409624..3410163 1 NC_009483.1 hypothetical protein 3410163 5164135 Gura_2940 Geobacter uraniireducens Rf4 hypothetical protein YP_001231685.1 3409624 D 351605 CDS YP_001231686.1 148264980 5164714 3410199..3410381 1 NC_009483.1 hypothetical protein 3410381 5164714 Gura_2941 Geobacter uraniireducens Rf4 hypothetical protein YP_001231686.1 3410199 D 351605 CDS YP_001231687.1 148264981 5164715 complement(3410408..3411298) 1 NC_009483.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RluA family pseudouridine synthase 3411298 5164715 Gura_2942 Geobacter uraniireducens Rf4 RluA family pseudouridine synthase YP_001231687.1 3410408 R 351605 CDS YP_001231688.1 148264982 5164716 3411914..3412255 1 NC_009483.1 hypothetical protein 3412255 5164716 Gura_2943 Geobacter uraniireducens Rf4 hypothetical protein YP_001231688.1 3411914 D 351605 CDS YP_001231689.1 148264983 5164550 3412719..3413033 1 NC_009483.1 hypothetical protein 3413033 5164550 Gura_2944 Geobacter uraniireducens Rf4 hypothetical protein YP_001231689.1 3412719 D 351605 CDS YP_001231690.1 148264984 5164551 3413138..3413737 1 NC_009483.1 hypothetical protein 3413737 5164551 Gura_2945 Geobacter uraniireducens Rf4 hypothetical protein YP_001231690.1 3413138 D 351605 CDS YP_001231691.1 148264985 5164552 complement(3413813..3414379) 1 NC_009483.1 hypothetical protein 3414379 5164552 Gura_2946 Geobacter uraniireducens Rf4 hypothetical protein YP_001231691.1 3413813 R 351605 CDS YP_001231692.1 148264986 5165016 3414631..3414924 1 NC_009483.1 hypothetical protein 3414924 5165016 Gura_2947 Geobacter uraniireducens Rf4 hypothetical protein YP_001231692.1 3414631 D 351605 CDS YP_001231693.1 148264987 5165017 complement(3415013..3415453) 1 NC_009483.1 hypothetical protein 3415453 5165017 Gura_2948 Geobacter uraniireducens Rf4 hypothetical protein YP_001231693.1 3415013 R 351605 CDS YP_001231694.1 148264988 5165018 3415644..3417281 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3417281 5165018 Gura_2949 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001231694.1 3415644 D 351605 CDS YP_001231695.1 148264989 5164933 3417694..3418689 1 NC_009483.1 poly-gamma-glutamate biosynthesis protein 3418689 5164933 Gura_2950 Geobacter uraniireducens Rf4 poly-gamma-glutamate biosynthesis protein YP_001231695.1 3417694 D 351605 CDS YP_001231696.1 148264990 5164934 3418955..3419686 1 NC_009483.1 PFAM: Roadblock/LC7 family protein; roadblock/LC7 family protein 3419686 5164934 Gura_2951 Geobacter uraniireducens Rf4 roadblock/LC7 family protein YP_001231696.1 3418955 D 351605 CDS YP_001231697.1 148264991 5164935 3419750..3420496 1 NC_009483.1 hypothetical protein 3420496 5164935 Gura_2952 Geobacter uraniireducens Rf4 hypothetical protein YP_001231697.1 3419750 D 351605 CDS YP_001231698.1 148264992 5165899 complement(3420529..3421356) 1 NC_009483.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3421356 lpxC 5165899 lpxC Geobacter uraniireducens Rf4 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_001231698.1 3420529 R 351605 CDS YP_001231699.1 148264993 5165900 complement(3421573..3422064) 1 NC_009483.1 hypothetical protein 3422064 5165900 Gura_2954 Geobacter uraniireducens Rf4 hypothetical protein YP_001231699.1 3421573 R 351605 CDS YP_001231700.1 148264994 5165901 complement(3422097..3422459) 1 NC_009483.1 hypothetical protein 3422459 5165901 Gura_2955 Geobacter uraniireducens Rf4 hypothetical protein YP_001231700.1 3422097 R 351605 CDS YP_001231701.1 148264995 5164344 complement(3422456..3423040) 1 NC_009483.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 3423040 5164344 Gura_2956 Geobacter uraniireducens Rf4 RNA polymerase factor sigma-70 YP_001231701.1 3422456 R 351605 CDS YP_001231702.1 148264996 5164345 complement(3423151..3423666) 1 NC_009483.1 PFAM: protein of unknown function DUF985; hypothetical protein 3423666 5164345 Gura_2957 Geobacter uraniireducens Rf4 hypothetical protein YP_001231702.1 3423151 R 351605 CDS YP_001231703.1 148264997 5164346 complement(3423667..3425052) 1 NC_009483.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 3425052 asnC 5164346 asnC Geobacter uraniireducens Rf4 asparaginyl-tRNA synthetase YP_001231703.1 3423667 R 351605 CDS YP_001231704.1 148264998 5163381 3425217..3425591 1 NC_009483.1 PFAM: PDZ/DHR/GLGF domain protein; PDZ/DHR/GLGF domain-containing protein 3425591 5163381 Gura_2959 Geobacter uraniireducens Rf4 PDZ/DHR/GLGF domain-containing protein YP_001231704.1 3425217 D 351605 CDS YP_001231705.1 148264999 5163382 3425642..3426019 1 NC_009483.1 TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin; YruB family glutaredoxin-like protein 3426019 5163382 Gura_2960 Geobacter uraniireducens Rf4 YruB family glutaredoxin-like protein YP_001231705.1 3425642 D 351605 CDS YP_001231706.1 148265000 5163383 complement(3426119..3426499) 1 NC_009483.1 hypothetical protein 3426499 5163383 Gura_2961 Geobacter uraniireducens Rf4 hypothetical protein YP_001231706.1 3426119 R 351605 CDS YP_001231707.1 148265001 5165562 complement(3426492..3427358) 1 NC_009483.1 PFAM: YdjC family protein; hypothetical protein 3427358 5165562 Gura_2962 Geobacter uraniireducens Rf4 hypothetical protein YP_001231707.1 3426492 R 351605 CDS YP_001231708.1 148265002 5165563 complement(3427371..3428801) 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 3428801 5165563 Gura_2963 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001231708.1 3427371 R 351605 CDS YP_001231709.1 148265003 5165564 3428961..3429743 1 NC_009483.1 PFAM: purine or other phosphorylase, family 1; purine phosphorylase family 1 3429743 5165564 Gura_2964 Geobacter uraniireducens Rf4 purine phosphorylase family 1 YP_001231709.1 3428961 D 351605 CDS YP_001231710.1 148265004 5164681 complement(3429873..3431639) 1 NC_009483.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; phosphoenolpyruvate-protein phosphotransferase 3431639 5164681 Gura_2965 Geobacter uraniireducens Rf4 phosphoenolpyruvate-protein phosphotransferase YP_001231710.1 3429873 R 351605 CDS YP_001231711.1 148265005 5164682 complement(3431620..3431886) 1 NC_009483.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; phosphotransferase system, phosphocarrier protein HPr 3431886 5164682 Gura_2966 Geobacter uraniireducens Rf4 phosphotransferase system, phosphocarrier protein HPr YP_001231711.1 3431620 R 351605 CDS YP_001231712.1 148265006 5164683 complement(3431913..3432308) 1 NC_009483.1 PFAM: PTS system fructose subfamily IIA component; PTS system fructose subfamily transporter subunit IIA 3432308 5164683 Gura_2967 Geobacter uraniireducens Rf4 PTS system fructose subfamily transporter subunit IIA YP_001231712.1 3431913 R 351605 CDS YP_001231713.1 148265007 5165235 complement(3432305..3433171) 1 NC_009483.1 PFAM: uncharacterised P-loop ATPase protein UPF0042; hypothetical protein 3433171 5165235 Gura_2968 Geobacter uraniireducens Rf4 hypothetical protein YP_001231713.1 3432305 R 351605 CDS YP_001231714.1 148265008 5165236 complement(3433173..3434132) 1 NC_009483.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 3434132 5165236 Gura_2969 Geobacter uraniireducens Rf4 HPr kinase/phosphorylase YP_001231714.1 3433173 R 351605 CDS YP_001231715.1 148265009 5165237 complement(3434129..3434599) 1 NC_009483.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; putative PTS IIA-like nitrogen-regulatory protein PtsN 3434599 5165237 Gura_2970 Geobacter uraniireducens Rf4 putative PTS IIA-like nitrogen-regulatory protein PtsN YP_001231715.1 3434129 R 351605 CDS YP_001231716.1 148265010 5162879 complement(3434608..3435153) 1 NC_009483.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; sigma-54 modulation protein/ribosomal protein S30EA 3435153 5162879 Gura_2971 Geobacter uraniireducens Rf4 sigma-54 modulation protein/ribosomal protein S30EA YP_001231716.1 3434608 R 351605 CDS YP_001231717.1 148265011 5162880 complement(3435238..3436683) 1 NC_009483.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; RNA polymerase sigma-54 subunit RpoN 3436683 5162880 Gura_2972 Geobacter uraniireducens Rf4 RNA polymerase sigma-54 subunit RpoN YP_001231717.1 3435238 R 351605 CDS YP_001231718.1 148265012 5162881 complement(3436784..3437524) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3437524 5162881 Gura_2973 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001231718.1 3436784 R 351605 CDS YP_001231719.1 148265013 5163925 complement(3437505..3438014) 1 NC_009483.1 PFAM: OstA family protein; OstA family protein 3438014 5163925 Gura_2974 Geobacter uraniireducens Rf4 OstA family protein YP_001231719.1 3437505 R 351605 CDS YP_001231720.1 148265014 5163926 complement(3438011..3438586) 1 NC_009483.1 PFAM: protein of unknown function DUF1239; hypothetical protein 3438586 5163926 Gura_2975 Geobacter uraniireducens Rf4 hypothetical protein YP_001231720.1 3438011 R 351605 CDS YP_001231721.1 148265015 5163927 complement(3438743..3439258) 1 NC_009483.1 TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 3439258 5163927 Gura_2976 Geobacter uraniireducens Rf4 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_001231721.1 3438743 R 351605 CDS YP_001231722.1 148265016 5165724 complement(3439349..3440314) 1 NC_009483.1 TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein 3440314 5165724 Gura_2977 Geobacter uraniireducens Rf4 KpsF/GutQ family protein YP_001231722.1 3439349 R 351605 CDS YP_001231723.1 148265017 5165725 complement(3440528..3441346) 1 NC_009483.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 3441346 5165725 Gura_2978 Geobacter uraniireducens Rf4 2-dehydro-3-deoxyphosphooctonate aldolase YP_001231723.1 3440528 R 351605 CDS YP_001231724.1 148265018 5165726 complement(3441479..3443083) 1 NC_009483.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 3443083 pyrG 5165726 pyrG Geobacter uraniireducens Rf4 CTP synthetase YP_001231724.1 3441479 R 351605 CDS YP_001231725.1 148265019 5163724 complement(3443168..3443923) 1 NC_009483.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 3443923 5163724 Gura_2980 Geobacter uraniireducens Rf4 3-deoxy-manno-octulosonate cytidylyltransferase YP_001231725.1 3443168 R 351605 CDS YP_001231726.1 148265020 5163725 complement(3444030..3445268) 1 NC_009483.1 PFAM: EAL domain protein; HDOD; diguanylate phosphodiesterase 3445268 5163725 Gura_2981 Geobacter uraniireducens Rf4 diguanylate phosphodiesterase YP_001231726.1 3444030 R 351605 CDS YP_001231727.1 148265021 5163726 complement(3445313..3446380) 1 NC_009483.1 PFAM: CheB methylesterase; response regulator receiver; response regulator receiver modulated CheB methylesterase 3446380 5163726 Gura_2982 Geobacter uraniireducens Rf4 response regulator receiver modulated CheB methylesterase YP_001231727.1 3445313 R 351605 CDS YP_001231728.1 148265022 5167034 complement(3446451..3446978) 1 NC_009483.1 PFAM: CheD family protein; CheD, stimulates methylation of MCP protein 3446978 5167034 Gura_2983 Geobacter uraniireducens Rf4 CheD, stimulates methylation of MCP protein YP_001231728.1 3446451 R 351605 CDS YP_001231729.1 148265023 5167035 complement(3446975..3447832) 1 NC_009483.1 PFAM: MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase 3447832 5167035 Gura_2984 Geobacter uraniireducens Rf4 protein-glutamate O-methyltransferase YP_001231729.1 3446975 R 351605 CDS YP_001231730.1 148265024 5167036 complement(3448069..3449799) 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3449799 5167036 Gura_2985 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001231730.1 3448069 R 351605 CDS YP_001231731.1 148265025 5165341 complement(3449879..3450367) 1 NC_009483.1 PFAM: CheW domain protein; putative CheW protein 3450367 5165341 Gura_2986 Geobacter uraniireducens Rf4 putative CheW protein YP_001231731.1 3449879 R 351605 CDS YP_001231732.1 148265026 5165342 complement(3450770..3451174) 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 3451174 5165342 Gura_2987 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001231732.1 3450770 R 351605 CDS YP_001231733.1 148265027 5165343 complement(3451207..3452766) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 3452766 5165343 Gura_2988 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001231733.1 3451207 R 351605 CDS YP_001231734.1 148265028 5165976 complement(3453011..3456292) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; methyl-accepting chemotaxis sensory transducer 3456292 5165976 Gura_2989 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001231734.1 3453011 R 351605 CDS YP_001231735.1 148265029 5165977 complement(3456489..3456740) 1 NC_009483.1 hypothetical protein 3456740 5165977 Gura_2990 Geobacter uraniireducens Rf4 hypothetical protein YP_001231735.1 3456489 R 351605 CDS YP_001231736.1 148265030 5165978 complement(3456791..3457300) 1 NC_009483.1 PFAM: CheW domain protein; putative CheW protein 3457300 5165978 Gura_2991 Geobacter uraniireducens Rf4 putative CheW protein YP_001231736.1 3456791 R 351605 CDS YP_001231737.1 148265031 5164903 complement(3457382..3459583) 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3459583 5164903 Gura_2992 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001231737.1 3457382 R 351605 CDS YP_001231738.1 148265032 5164904 complement(3460029..3462167) 1 NC_009483.1 PFAM: CheW domain protein; ATP-binding region, ATPase domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; CheA signal transduction histidine kinase 3462167 5164904 Gura_2993 Geobacter uraniireducens Rf4 CheA signal transduction histidine kinase YP_001231738.1 3460029 R 351605 CDS YP_001231739.1 148265033 5164905 complement(3462164..3462529) 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 3462529 5164905 Gura_2994 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001231739.1 3462164 R 351605 CDS YP_001231740.1 148265034 5166667 complement(3462529..3462891) 1 NC_009483.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulfate transporter/antisigma-factor antagonist STAS 3462891 5166667 Gura_2995 Geobacter uraniireducens Rf4 sulfate transporter/antisigma-factor antagonist STAS YP_001231740.1 3462529 R 351605 CDS YP_001231741.1 148265035 5166668 complement(3462922..3464835) 1 NC_009483.1 methyl-accepting chemotaxis sensory transducer 3464835 5166668 Gura_2996 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001231741.1 3462922 R 351605 CDS YP_001231742.1 148265036 5166669 complement(3465185..3465658) 1 NC_009483.1 hypothetical protein 3465658 5166669 Gura_2997 Geobacter uraniireducens Rf4 hypothetical protein YP_001231742.1 3465185 R 351605 CDS YP_001231743.1 148265037 5166489 3465843..3466133 1 NC_009483.1 hypothetical protein 3466133 5166489 Gura_2998 Geobacter uraniireducens Rf4 hypothetical protein YP_001231743.1 3465843 D 351605 CDS YP_001231744.1 148265038 5166490 complement(3466209..3466853) 1 NC_009483.1 PFAM: iron dependent repressor; FeoA family protein; iron dependent repressor 3466853 5166490 Gura_2999 Geobacter uraniireducens Rf4 iron dependent repressor YP_001231744.1 3466209 R 351605 CDS YP_001231745.1 148265039 5166491 complement(3466926..3467105) 1 NC_009483.1 hypothetical protein 3467105 5166491 Gura_3000 Geobacter uraniireducens Rf4 hypothetical protein YP_001231745.1 3466926 R 351605 CDS YP_001231746.1 148265040 5166483 complement(3467243..3469231) 1 NC_009483.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; ferrous iron transport protein B 3469231 5166483 Gura_3001 Geobacter uraniireducens Rf4 ferrous iron transport protein B YP_001231746.1 3467243 R 351605 CDS YP_001231747.1 148265041 5166484 complement(3469304..3469765) 1 NC_009483.1 PFAM: ferric-uptake regulator; ferric uptake regulator family protein 3469765 5166484 Gura_3002 Geobacter uraniireducens Rf4 ferric uptake regulator family protein YP_001231747.1 3469304 R 351605 CDS YP_001231748.1 148265042 5166485 3469970..3472228 1 NC_009483.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: NHL repeat containing protein; Ig domain protein, group 2 domain protein; YVTN beta-propeller repeat-containing protein 3472228 5166485 Gura_3003 Geobacter uraniireducens Rf4 YVTN beta-propeller repeat-containing protein YP_001231748.1 3469970 D 351605 CDS YP_001231749.1 148265043 5164416 complement(3472651..3473439) 1 NC_009483.1 protein-disulfide isomerase-like protein 3473439 5164416 Gura_3004 Geobacter uraniireducens Rf4 protein-disulfide isomerase-like protein YP_001231749.1 3472651 R 351605 CDS YP_001231750.1 148265044 5164417 complement(3473553..3474947) 1 NC_009483.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 3474947 5164417 Gura_3005 Geobacter uraniireducens Rf4 S-adenosyl-L-homocysteine hydrolase YP_001231750.1 3473553 R 351605 CDS YP_001231751.1 148265045 5164418 complement(3475060..3475977) 1 NC_009483.1 PFAM: regulatory protein, ArsR; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 3475977 5164418 Gura_3006 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001231751.1 3475060 R 351605 CDS YP_001231752.1 148265046 5165585 complement(3476448..3477587) 1 NC_009483.1 PFAM: 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 3477587 5165585 Gura_3007 Geobacter uraniireducens Rf4 2-nitropropane dioxygenase YP_001231752.1 3476448 R 351605 CDS YP_001231753.1 148265047 5165586 3477729..3478043 1 NC_009483.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; XRE family plasmid maintenance system antidote protein 3478043 5165586 Gura_3008 Geobacter uraniireducens Rf4 XRE family plasmid maintenance system antidote protein YP_001231753.1 3477729 D 351605 CDS YP_001231754.1 148265048 5165587 3478089..3478373 1 NC_009483.1 hypothetical protein 3478373 5165587 Gura_3009 Geobacter uraniireducens Rf4 hypothetical protein YP_001231754.1 3478089 D 351605 CDS YP_001231755.1 148265049 5165676 3478416..3480596 1 NC_009483.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 3480596 5165676 Gura_3010 Geobacter uraniireducens Rf4 peptidase S8/S53 subtilisin kexin sedolisin YP_001231755.1 3478416 D 351605 CDS YP_001231756.1 148265050 5165677 complement(3480740..3495025) 1 NC_009483.1 SMART: LamG domain protein jellyroll fold domain protein; LamG domain-containing protein 3495025 5165677 Gura_3011 Geobacter uraniireducens Rf4 LamG domain-containing protein YP_001231756.1 3480740 R 351605 CDS YP_001231757.1 148265051 5165678 3495127..3495378 1 NC_009483.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; AbrB family transcriptional regulator 3495378 5165678 Gura_3012 Geobacter uraniireducens Rf4 AbrB family transcriptional regulator YP_001231757.1 3495127 D 351605 CDS YP_001231758.1 148265052 5162955 3495375..3495776 1 NC_009483.1 PFAM: PilT protein domain protein; PilT domain-containing protein 3495776 5162955 Gura_3013 Geobacter uraniireducens Rf4 PilT domain-containing protein YP_001231758.1 3495375 D 351605 CDS YP_001231759.1 148265053 5162956 complement(3495883..3496884) 1 NC_009483.1 hypothetical protein 3496884 5162956 Gura_3014 Geobacter uraniireducens Rf4 hypothetical protein YP_001231759.1 3495883 R 351605 CDS YP_001231760.1 148265054 5162957 complement(3496930..3497940) 1 NC_009483.1 hypothetical protein 3497940 5162957 Gura_3015 Geobacter uraniireducens Rf4 hypothetical protein YP_001231760.1 3496930 R 351605 CDS YP_001231761.1 148265055 5163129 complement(3498270..3499208) 1 NC_009483.1 PFAM: protein of unknown function DUF1568; SMART: Chromosomal replication initiator, DnaA C-terminal domain; hypothetical protein 3499208 5163129 Gura_3016 Geobacter uraniireducens Rf4 hypothetical protein YP_001231761.1 3498270 R 351605 CDS YP_001231762.1 148265056 5163130 complement(3499291..3499623) 1 NC_009483.1 hypothetical protein 3499623 5163130 Gura_3017 Geobacter uraniireducens Rf4 hypothetical protein YP_001231762.1 3499291 R 351605 CDS YP_001231763.1 148265057 5163131 complement(3499668..3500633) 1 NC_009483.1 hypothetical protein 3500633 5163131 Gura_3018 Geobacter uraniireducens Rf4 hypothetical protein YP_001231763.1 3499668 R 351605 CDS YP_001231764.1 148265058 5166766 complement(3500641..3503226) 1 NC_009483.1 hypothetical protein 3503226 5166766 Gura_3019 Geobacter uraniireducens Rf4 hypothetical protein YP_001231764.1 3500641 R 351605 CDS YP_001231765.1 148265059 5166767 complement(3503223..3504173) 1 NC_009483.1 PFAM: protein of unknown function DUF1568; hypothetical protein 3504173 5166767 Gura_3020 Geobacter uraniireducens Rf4 hypothetical protein YP_001231765.1 3503223 R 351605 CDS YP_001231766.1 148265060 5166768 complement(3504505..3505461) 1 NC_009483.1 hypothetical protein 3505461 5166768 Gura_3021 Geobacter uraniireducens Rf4 hypothetical protein YP_001231766.1 3504505 R 351605 CDS YP_001231767.1 148265061 5165691 complement(3505465..3516225) 1 NC_009483.1 hypothetical protein 3516225 5165691 Gura_3022 Geobacter uraniireducens Rf4 hypothetical protein YP_001231767.1 3505465 R 351605 CDS YP_001231768.1 148265062 5165692 complement(3516642..3517964) 1 NC_009483.1 PFAM: peptidase S41; peptidase S41 3517964 5165692 Gura_3023 Geobacter uraniireducens Rf4 peptidase S41 YP_001231768.1 3516642 R 351605 CDS YP_001231769.1 148265063 5165693 complement(3518031..3519749) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 3519749 5165693 Gura_3024 Geobacter uraniireducens Rf4 PAS/PAC sensor signal transduction histidine kinase YP_001231769.1 3518031 R 351605 CDS YP_001231770.1 148265064 5163856 complement(3519895..3520449) 1 NC_009483.1 hypothetical protein 3520449 5163856 Gura_3025 Geobacter uraniireducens Rf4 hypothetical protein YP_001231770.1 3519895 R 351605 CDS YP_001231771.1 148265065 5163857 3520689..3521222 1 NC_009483.1 hypothetical protein 3521222 5163857 Gura_3026 Geobacter uraniireducens Rf4 hypothetical protein YP_001231771.1 3520689 D 351605 CDS YP_001231772.1 148265066 5163858 3521219..3522244 1 NC_009483.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 3522244 5163858 Gura_3027 Geobacter uraniireducens Rf4 integrase catalytic subunit YP_001231772.1 3521219 D 351605 CDS YP_001231773.1 148265067 5165010 complement(3522155..3522892) 1 NC_009483.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 3522892 5165010 Gura_3028 Geobacter uraniireducens Rf4 integrase catalytic subunit YP_001231773.1 3522155 R 351605 CDS YP_001231774.1 148265068 5165011 complement(3522928..3523221) 1 NC_009483.1 hypothetical protein 3523221 5165011 Gura_3029 Geobacter uraniireducens Rf4 hypothetical protein YP_001231774.1 3522928 R 351605 CDS YP_001231775.1 148265069 5165012 complement(3524200..3524622) 1 NC_009483.1 hypothetical protein 3524622 5165012 Gura_3030 Geobacter uraniireducens Rf4 hypothetical protein YP_001231775.1 3524200 R 351605 CDS YP_001231776.1 148265070 5165306 complement(3524832..3526229) 1 NC_009483.1 hypothetical protein 3526229 5165306 Gura_3031 Geobacter uraniireducens Rf4 hypothetical protein YP_001231776.1 3524832 R 351605 CDS YP_001231777.1 148265071 5165307 complement(3526481..3527155) 1 NC_009483.1 hypothetical protein 3527155 5165307 Gura_3032 Geobacter uraniireducens Rf4 hypothetical protein YP_001231777.1 3526481 R 351605 CDS YP_001231778.1 148265072 5165308 complement(3527269..3527676) 1 NC_009483.1 hypothetical protein 3527676 5165308 Gura_3033 Geobacter uraniireducens Rf4 hypothetical protein YP_001231778.1 3527269 R 351605 CDS YP_001231779.1 148265073 5165347 complement(3528255..3529082) 1 NC_009483.1 PFAM: coenzyme A transferase; glutaconate CoA-transferase 3529082 5165347 Gura_3034 Geobacter uraniireducens Rf4 glutaconate CoA-transferase YP_001231779.1 3528255 R 351605 CDS YP_001231780.1 148265074 5165348 complement(3529084..3530049) 1 NC_009483.1 PFAM: coenzyme A transferase; glutaconate CoA-transferase 3530049 5165348 Gura_3035 Geobacter uraniireducens Rf4 glutaconate CoA-transferase YP_001231780.1 3529084 R 351605 CDS YP_001231781.1 148265075 5165349 complement(3530320..3531477) 1 NC_009483.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein 3531477 5165349 Gura_3036 Geobacter uraniireducens Rf4 acyl-CoA dehydrogenase domain-containing protein YP_001231781.1 3530320 R 351605 CDS YP_001231782.1 148265076 5165435 complement(3531714..3532631) 1 NC_009483.1 PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 3532631 5165435 Gura_3037 Geobacter uraniireducens Rf4 electron transfer flavoprotein subunit alpha YP_001231782.1 3531714 R 351605 CDS YP_001231783.1 148265077 5165436 complement(3532912..3533772) 1 NC_009483.1 PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta 3533772 5165436 Gura_3038 Geobacter uraniireducens Rf4 electron transfer flavoprotein subunit beta YP_001231783.1 3532912 R 351605 CDS YP_001231784.1 148265078 5165437 complement(3533826..3535811) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 3535811 5165437 Gura_3039 Geobacter uraniireducens Rf4 hypothetical protein YP_001231784.1 3533826 R 351605 CDS YP_001231785.1 148265079 5165546 complement(3535924..3537132) 1 NC_009483.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein 3537132 5165546 Gura_3040 Geobacter uraniireducens Rf4 acyl-CoA dehydrogenase domain-containing protein YP_001231785.1 3535924 R 351605 CDS YP_001231786.1 148265080 5165547 complement(3537160..3537942) 1 NC_009483.1 PFAM: Enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 3537942 5165547 Gura_3041 Geobacter uraniireducens Rf4 enoyl-CoA hydratase/isomerase YP_001231786.1 3537160 R 351605 CDS YP_001231787.1 148265081 5165548 complement(3538143..3538988) 1 NC_009483.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; 3-hydroxybutyryl-CoA dehydrogenase 3538988 5165548 Gura_3042 Geobacter uraniireducens Rf4 3-hydroxybutyryl-CoA dehydrogenase YP_001231787.1 3538143 R 351605 CDS YP_001231788.1 148265082 5166438 complement(3539118..3540293) 1 NC_009483.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 3540293 5166438 Gura_3043 Geobacter uraniireducens Rf4 acetyl-CoA acetyltransferase YP_001231788.1 3539118 R 351605 CDS YP_001231789.1 148265083 5166439 3540824..3541864 1 NC_009483.1 PFAM: Helix-turn-helix, type 11 domain protein; helix-turn-helix, type 11 domain-containing protein 3541864 5166439 Gura_3044 Geobacter uraniireducens Rf4 helix-turn-helix, type 11 domain-containing protein YP_001231789.1 3540824 D 351605 CDS YP_001231790.1 148265084 5166440 complement(3542051..3543742) 1 NC_009483.1 PFAM: chemotaxis sensory transducer; Cache, type 2 domain protein; methyl-accepting chemotaxis sensory transducer 3543742 5166440 Gura_3045 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001231790.1 3542051 R 351605 CDS YP_001231791.1 148265085 5166492 3544333..3546135 1 NC_009483.1 PFAM: glycosyl transferase, family 4; FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 3546135 5166492 Gura_3046 Geobacter uraniireducens Rf4 FKBP-type peptidylprolyl isomerase YP_001231791.1 3544333 D 351605 CDS YP_001231792.1 148265086 5166493 3546201..3546650 1 NC_009483.1 hypothetical protein 3546650 5166493 Gura_3047 Geobacter uraniireducens Rf4 hypothetical protein YP_001231792.1 3546201 D 351605 CDS YP_001231793.1 148265087 5166494 3546762..3550688 1 NC_009483.1 PFAM: multicopper oxidase, type 2; FG-GAP repeat protein; multicopper oxidase, type 2 3550688 5166494 Gura_3048 Geobacter uraniireducens Rf4 multicopper oxidase, type 2 YP_001231793.1 3546762 D 351605 CDS YP_001231794.1 148265088 5167060 3550869..3551087 1 NC_009483.1 hypothetical protein 3551087 5167060 Gura_3049 Geobacter uraniireducens Rf4 hypothetical protein YP_001231794.1 3550869 D 351605 CDS YP_001231795.1 148265089 5167062 complement(3551419..3552510) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 3552510 5167062 Gura_3051 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001231795.1 3551419 R 351605 CDS YP_001231796.1 148265090 5166513 complement(3552494..3553540) 1 NC_009483.1 PFAM: glycoside hydrolase, family 20; glycoside hydrolase family protein 3553540 5166513 Gura_3052 Geobacter uraniireducens Rf4 glycoside hydrolase family protein YP_001231796.1 3552494 R 351605 CDS YP_001231797.1 148265091 5166514 complement(3553582..3554580) 1 NC_009483.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; type 12 methyltransferase 3554580 5166514 Gura_3053 Geobacter uraniireducens Rf4 type 12 methyltransferase YP_001231797.1 3553582 R 351605 CDS YP_001231798.1 148265092 5166515 complement(3554645..3555556) 1 NC_009483.1 glycosyltransferase-like protein 3555556 5166515 Gura_3054 Geobacter uraniireducens Rf4 glycosyltransferase-like protein YP_001231798.1 3554645 R 351605 CDS YP_001231799.1 148265093 5165321 complement(3555637..3556743) 1 NC_009483.1 hypothetical protein 3556743 5165321 Gura_3055 Geobacter uraniireducens Rf4 hypothetical protein YP_001231799.1 3555637 R 351605 CDS YP_001231800.1 148265094 5165322 complement(3556840..3557721) 1 NC_009483.1 hypothetical protein 3557721 5165322 Gura_3056 Geobacter uraniireducens Rf4 hypothetical protein YP_001231800.1 3556840 R 351605 CDS YP_001231801.1 148265095 5165323 complement(3557721..3558677) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 3558677 5165323 Gura_3057 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231801.1 3557721 R 351605 CDS YP_001231802.1 148265096 5163417 complement(3558700..3559656) 1 NC_009483.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; type 12 methyltransferase 3559656 5163417 Gura_3058 Geobacter uraniireducens Rf4 type 12 methyltransferase YP_001231802.1 3558700 R 351605 CDS YP_001231803.1 148265097 5163418 complement(3559653..3560369) 1 NC_009483.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 3560369 5163418 Gura_3059 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001231803.1 3559653 R 351605 CDS YP_001231804.1 148265098 5163419 complement(3560359..3561648) 1 NC_009483.1 PFAM: virulence factor MVIN family protein; virulence factor MVIN family protein 3561648 5163419 Gura_3060 Geobacter uraniireducens Rf4 virulence factor MVIN family protein YP_001231804.1 3560359 R 351605 CDS YP_001231805.1 148265099 5166799 complement(3561645..3562895) 1 NC_009483.1 PFAM: lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 3562895 5166799 Gura_3061 Geobacter uraniireducens Rf4 lipopolysaccharide biosynthesis protein YP_001231805.1 3561645 R 351605 CDS YP_001231806.1 148265100 5166800 complement(3563129..3565633) 1 NC_009483.1 PFAM: polysaccharide export protein; polysaccharide export protein 3565633 5166800 Gura_3062 Geobacter uraniireducens Rf4 polysaccharide export protein YP_001231806.1 3563129 R 351605 CDS YP_001231807.1 148265101 5166801 complement(3566182..3567783) 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3567783 5166801 Gura_3063 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001231807.1 3566182 R 351605 CDS YP_001231808.1 148265102 5165579 3567959..3568309 1 NC_009483.1 hypothetical protein 3568309 5165579 Gura_3064 Geobacter uraniireducens Rf4 hypothetical protein YP_001231808.1 3567959 D 351605 CDS YP_001231809.1 148265103 5165580 complement(3568394..3570004) 1 NC_009483.1 hypothetical protein 3570004 5165580 Gura_3065 Geobacter uraniireducens Rf4 hypothetical protein YP_001231809.1 3568394 R 351605 CDS YP_001231810.1 148265104 5165581 3570362..3572011 1 NC_009483.1 PFAM: Cache, type 2 domain protein; cache type 2 domain-containing protein 3572011 5165581 Gura_3066 Geobacter uraniireducens Rf4 cache type 2 domain-containing protein YP_001231810.1 3570362 D 351605 CDS YP_001231811.1 148265105 5163295 3572213..3573337 1 NC_009483.1 PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 3573337 5163295 Gura_3067 Geobacter uraniireducens Rf4 filamentation induced by cAMP protein fic YP_001231811.1 3572213 D 351605 CDS YP_001231812.1 148265106 5163296 3573478..3574947 1 NC_009483.1 PFAM: Ricin B lectin; Ricin B lectin 3574947 5163296 Gura_3068 Geobacter uraniireducens Rf4 Ricin B lectin YP_001231812.1 3573478 D 351605 CDS YP_001231813.1 148265107 5163297 3575116..3576045 1 NC_009483.1 PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 3576045 5163297 Gura_3069 Geobacter uraniireducens Rf4 filamentation induced by cAMP protein fic YP_001231813.1 3575116 D 351605 CDS YP_001231814.1 148265108 5166805 complement(3576089..3577543) 1 NC_009483.1 hypothetical protein 3577543 5166805 Gura_3070 Geobacter uraniireducens Rf4 hypothetical protein YP_001231814.1 3576089 R 351605 CDS YP_001231815.1 148265109 5166806 complement(3577554..3578054) 1 NC_009483.1 hypothetical protein 3578054 5166806 Gura_3071 Geobacter uraniireducens Rf4 hypothetical protein YP_001231815.1 3577554 R 351605 CDS YP_001231816.1 148265110 5166807 complement(3578051..3578551) 1 NC_009483.1 PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 3578551 5166807 Gura_3072 Geobacter uraniireducens Rf4 biopolymer transport protein ExbD/TolR YP_001231816.1 3578051 R 351605 CDS YP_001231817.1 148265111 5163135 complement(3578564..3579199) 1 NC_009483.1 PFAM: MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 3579199 5163135 Gura_3073 Geobacter uraniireducens Rf4 MotA/TolQ/ExbB proton channel YP_001231817.1 3578564 R 351605 CDS YP_001231818.1 148265112 5163136 complement(3579408..3579728) 1 NC_009483.1 hypothetical protein 3579728 5163136 Gura_3074 Geobacter uraniireducens Rf4 hypothetical protein YP_001231818.1 3579408 R 351605 CDS YP_001231819.1 148265113 5163137 complement(3579762..3580484) 1 NC_009483.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein 3580484 5163137 Gura_3075 Geobacter uraniireducens Rf4 TPR repeat-containing protein YP_001231819.1 3579762 R 351605 CDS YP_001231820.1 148265114 5166170 complement(3580522..3583848) 1 NC_009483.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein 3583848 5166170 Gura_3076 Geobacter uraniireducens Rf4 TPR repeat-containing protein YP_001231820.1 3580522 R 351605 CDS YP_001231821.1 148265115 5166171 complement(3583845..3585734) 1 NC_009483.1 hypothetical protein 3585734 5166171 Gura_3077 Geobacter uraniireducens Rf4 hypothetical protein YP_001231821.1 3583845 R 351605 CDS YP_001231822.1 148265116 5166172 complement(3585738..3586328) 1 NC_009483.1 hypothetical protein 3586328 5166172 Gura_3078 Geobacter uraniireducens Rf4 hypothetical protein YP_001231822.1 3585738 R 351605 CDS YP_001231823.1 148265117 5166292 complement(3586424..3591526) 1 NC_009483.1 PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein 3591526 5166292 Gura_3079 Geobacter uraniireducens Rf4 OmpA/MotB domain-containing protein YP_001231823.1 3586424 R 351605 CDS YP_001231824.1 148265118 5166293 complement(3591832..3600393) 1 NC_009483.1 TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; hypothetical protein 3600393 5166293 Gura_3080 Geobacter uraniireducens Rf4 hypothetical protein YP_001231824.1 3591832 R 351605 CDS YP_001231825.1 148265119 5166294 complement(3600778..3601047) 1 NC_009483.1 hypothetical protein 3601047 5166294 Gura_3081 Geobacter uraniireducens Rf4 hypothetical protein YP_001231825.1 3600778 R 351605 CDS YP_001231826.1 148265120 5162970 3601884..3603197 1 NC_009483.1 PFAM: phage integrase family protein; phage integrase family protein 3603197 5162970 Gura_3082 Geobacter uraniireducens Rf4 phage integrase family protein YP_001231826.1 3601884 D 351605 CDS YP_001231827.1 148265121 5162971 3603321..3603923 1 NC_009483.1 transcriptional regulator-like protein 3603923 5162971 Gura_3083 Geobacter uraniireducens Rf4 transcriptional regulator-like protein YP_001231827.1 3603321 D 351605 CDS YP_001231828.1 148265122 5163485 3608342..3609676 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 3609676 5163485 Gura_3089 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001231828.1 3608342 D 351605 CDS YP_001231829.1 148265123 5164617 3611298..3612302 1 NC_009483.1 PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein 3612302 5164617 Gura_3091 Geobacter uraniireducens Rf4 secretion protein HlyD family protein YP_001231829.1 3611298 D 351605 CDS YP_001231830.1 148265124 5164618 3612299..3613819 1 NC_009483.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA family drug resistance transporter 3613819 5164618 Gura_3092 Geobacter uraniireducens Rf4 EmrB/QacA family drug resistance transporter YP_001231830.1 3612299 D 351605 CDS YP_001231831.1 148265125 5164619 complement(3613915..3615147) 1 NC_009483.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; malonyl CoA-acyl carrier protein transacylase 3615147 5164619 Gura_3093 Geobacter uraniireducens Rf4 malonyl CoA-acyl carrier protein transacylase YP_001231831.1 3613915 R 351605 CDS YP_001231832.1 148265126 5165109 complement(3615183..3618971) 1 NC_009483.1 PFAM: beta-ketoacyl synthase; phosphopantetheine-binding; erythronolide synthase 3618971 5165109 Gura_3094 Geobacter uraniireducens Rf4 erythronolide synthase YP_001231832.1 3615183 R 351605 CDS YP_001231833.1 148265127 5165110 complement(3618955..3640428) 1 NC_009483.1 PFAM: beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; beta-ketoacyl synthase 3640428 5165110 Gura_3095 Geobacter uraniireducens Rf4 beta-ketoacyl synthase YP_001231833.1 3618955 R 351605 CDS YP_001231834.1 148265128 5165111 complement(3640746..3644693) 1 NC_009483.1 PFAM: beta-ketoacyl synthase; phosphopantetheine-binding; erythronolide synthase 3644693 5165111 Gura_3096 Geobacter uraniireducens Rf4 erythronolide synthase YP_001231834.1 3640746 R 351605 CDS YP_001231835.1 148265129 5164008 complement(3644677..3659286) 1 NC_009483.1 PFAM: beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; beta-ketoacyl synthase 3659286 5164008 Gura_3097 Geobacter uraniireducens Rf4 beta-ketoacyl synthase YP_001231835.1 3644677 R 351605 CDS YP_001231836.1 148265130 5164009 complement(3659289..3664442) 1 NC_009483.1 PFAM: beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; mycocerosate synthase 3664442 5164009 Gura_3098 Geobacter uraniireducens Rf4 mycocerosate synthase YP_001231836.1 3659289 R 351605 CDS YP_001231837.1 148265131 5164010 3665129..3666343 1 NC_009483.1 PFAM: transposase, mutator type; transposase, mutator type 3666343 5164010 Gura_3099 Geobacter uraniireducens Rf4 transposase, mutator type YP_001231837.1 3665129 D 351605 CDS YP_001231838.1 148265132 5164166 complement(3666467..3666625) 1 NC_009483.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 3666625 5164166 Gura_3100 Geobacter uraniireducens Rf4 rubredoxin-type Fe(Cys)4 protein YP_001231838.1 3666467 R 351605 CDS YP_001231839.1 148265133 5164167 complement(3666680..3667816) 1 NC_009483.1 TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase, class V; Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; cysteine desulfurase 3667816 5164167 Gura_3101 Geobacter uraniireducens Rf4 cysteine desulfurase YP_001231839.1 3666680 R 351605 CDS YP_001231840.1 148265134 5164168 complement(3667925..3668938) 1 NC_009483.1 TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 3668938 5164168 Gura_3102 Geobacter uraniireducens Rf4 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_001231840.1 3667925 R 351605 CDS YP_001231841.1 148265135 5164139 complement(3669201..3669551) 1 NC_009483.1 PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 3669551 5164139 Gura_3103 Geobacter uraniireducens Rf4 transposase IS3/IS911 family protein YP_001231841.1 3669201 R 351605 CDS YP_001231842.1 148265136 5164140 complement(3669963..3670763) 1 NC_009483.1 PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; response regulator receiver protein 3670763 5164140 Gura_3104 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001231842.1 3669963 R 351605 CDS YP_001231843.1 148265137 5164141 complement(3670973..3673267) 1 NC_009483.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; Malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; 2-nitropropane dioxygenase, NPD; malonyl CoA-acyl carrier protein transacylase 3673267 5164141 Gura_3105 Geobacter uraniireducens Rf4 malonyl CoA-acyl carrier protein transacylase YP_001231843.1 3670973 R 351605 CDS YP_001231844.1 148265138 5164521 complement(3673285..3674250) 1 NC_009483.1 PFAM: acyl transferase domain protein; acyl transferase domain-containing protein 3674250 5164521 Gura_3106 Geobacter uraniireducens Rf4 acyl transferase domain-containing protein YP_001231844.1 3673285 R 351605 CDS YP_001231845.1 148265139 5164522 complement(3674286..3675119) 1 NC_009483.1 PFAM: 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 3675119 5164522 Gura_3107 Geobacter uraniireducens Rf4 4'-phosphopantetheinyl transferase YP_001231845.1 3674286 R 351605 CDS YP_001231846.1 148265140 5164523 complement(3675149..3675850) 1 NC_009483.1 PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 3675850 5164523 Gura_3108 Geobacter uraniireducens Rf4 beta-lactamase domain-containing protein YP_001231846.1 3675149 R 351605 CDS YP_001231847.1 148265141 5165798 3677311..3678183 1 NC_009483.1 PFAM: phage integrase family protein; phage integrase family protein 3678183 5165798 Gura_3109 Geobacter uraniireducens Rf4 phage integrase family protein YP_001231847.1 3677311 D 351605 CDS YP_001231848.1 148265142 5165799 3678183..3679280 1 NC_009483.1 PFAM: putative transposase; putative transposase 3679280 5165799 Gura_3110 Geobacter uraniireducens Rf4 putative transposase YP_001231848.1 3678183 D 351605 CDS YP_001231849.1 148265143 5165800 3679721..3680470 1 NC_009483.1 N-acyl-L-homoserine lactone synthetase-like protein 3680470 5165800 Gura_3111 Geobacter uraniireducens Rf4 N-acyl-L-homoserine lactone synthetase-like protein YP_001231849.1 3679721 D 351605 CDS YP_001231850.1 148265144 5162655 complement(3680391..3681143) 1 NC_009483.1 PFAM: regulatory protein, LuxR; Autoinducer-binding domain protein; regulatory protein LuxR 3681143 5162655 Gura_3112 Geobacter uraniireducens Rf4 regulatory protein LuxR YP_001231850.1 3680391 R 351605 CDS YP_001231851.1 148265145 5166794 complement(3683780..3684577) 1 NC_009483.1 transposase 3684577 5166794 Gura_3116 Geobacter uraniireducens Rf4 transposase YP_001231851.1 3683780 R 351605 CDS YP_001231852.1 148265146 5166795 3684983..3685864 1 NC_009483.1 hypothetical protein 3685864 5166795 Gura_3117 Geobacter uraniireducens Rf4 hypothetical protein YP_001231852.1 3684983 D 351605 CDS YP_001231853.1 148265147 5163853 3685872..3686186 1 NC_009483.1 hypothetical protein 3686186 5163853 Gura_3118 Geobacter uraniireducens Rf4 hypothetical protein YP_001231853.1 3685872 D 351605 CDS YP_001231854.1 148265148 5166600 complement(3687343..3688695) 1 NC_009483.1 PFAM: Polynucleotide adenylyltransferase region; polynucleotide adenylyltransferase 3688695 5166600 Gura_3120 Geobacter uraniireducens Rf4 polynucleotide adenylyltransferase YP_001231854.1 3687343 R 351605 CDS YP_001231855.1 148265149 5166601 complement(3688792..3689109) 1 NC_009483.1 hypothetical protein 3689109 5166601 Gura_3121 Geobacter uraniireducens Rf4 hypothetical protein YP_001231855.1 3688792 R 351605 CDS YP_001231856.1 148265150 5164285 complement(3689202..3689846) 1 NC_009483.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase 3689846 5164285 Gura_3122 Geobacter uraniireducens Rf4 HAD family hydrolase YP_001231856.1 3689202 R 351605 CDS YP_001231857.1 148265151 5164286 complement(3689900..3691450) 1 NC_009483.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 3691450 guaA 5164286 guaA Geobacter uraniireducens Rf4 GMP synthase YP_001231857.1 3689900 R 351605 CDS YP_001231858.1 148265152 5164287 complement(3691543..3693012) 1 NC_009483.1 TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase 3693012 5164287 Gura_3124 Geobacter uraniireducens Rf4 inosine-5'-monophosphate dehydrogenase YP_001231858.1 3691543 R 351605 CDS YP_001231859.1 148265153 5165368 complement(3693132..3694202) 1 NC_009483.1 PFAM: peptidase M20; peptidase M42 family protein; peptidase M42 family protein 3694202 5165368 Gura_3125 Geobacter uraniireducens Rf4 peptidase M42 family protein YP_001231859.1 3693132 R 351605 CDS YP_001231860.1 148265154 5165369 complement(3694257..3694757) 1 NC_009483.1 PFAM: protein of unknown function DUF151; hypothetical protein 3694757 5165369 Gura_3126 Geobacter uraniireducens Rf4 hypothetical protein YP_001231860.1 3694257 R 351605 CDS YP_001231861.1 148265155 5165370 complement(3694797..3696119) 1 NC_009483.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 3696119 5165370 Gura_3127 Geobacter uraniireducens Rf4 (dimethylallyl)adenosine tRNA methylthiotransferase YP_001231861.1 3694797 R 351605 CDS YP_001231862.1 148265156 5162852 3696548..3698236 1 NC_009483.1 hypothetical protein 3698236 5162852 Gura_3128 Geobacter uraniireducens Rf4 hypothetical protein YP_001231862.1 3696548 D 351605 CDS YP_001231863.1 148265157 5162853 3698395..3698721 1 NC_009483.1 hypothetical protein 3698721 5162853 Gura_3129 Geobacter uraniireducens Rf4 hypothetical protein YP_001231863.1 3698395 D 351605 CDS YP_001231864.1 148265158 5162854 3698869..3700242 1 NC_009483.1 hypothetical protein 3700242 5162854 Gura_3130 Geobacter uraniireducens Rf4 hypothetical protein YP_001231864.1 3698869 D 351605 CDS YP_001231865.1 148265159 5166778 3700429..3700692 1 NC_009483.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 3700692 rpsT 5166778 rpsT Geobacter uraniireducens Rf4 30S ribosomal protein S20 YP_001231865.1 3700429 D 351605 CDS YP_001231866.1 148265160 5166779 complement(3700784..3701779) 1 NC_009483.1 TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; DNA polymerase III subunit delta 3701779 5166779 Gura_3132 Geobacter uraniireducens Rf4 DNA polymerase III subunit delta YP_001231866.1 3700784 R 351605 CDS YP_001231867.1 148265161 5166780 complement(3701868..3702386) 1 NC_009483.1 hypothetical protein 3702386 5166780 Gura_3133 Geobacter uraniireducens Rf4 hypothetical protein YP_001231867.1 3701868 R 351605 CDS YP_001231868.1 148265162 5164939 complement(3702407..3704881) 1 NC_009483.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 3704881 leuS 5164939 leuS Geobacter uraniireducens Rf4 leucyl-tRNA synthetase YP_001231868.1 3702407 R 351605 CDS YP_001231869.1 148265163 5164940 complement(3705089..3707242) 1 NC_009483.1 hypothetical protein 3707242 5164940 Gura_3135 Geobacter uraniireducens Rf4 hypothetical protein YP_001231869.1 3705089 R 351605 CDS YP_001231870.1 148265164 5164941 complement(3707340..3707717) 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 3707717 5164941 Gura_3136 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001231870.1 3707340 R 351605 CDS YP_001231871.1 148265165 5165007 complement(3707803..3708627) 1 NC_009483.1 PFAM: GAF domain protein; putative GAF sensor protein 3708627 5165007 Gura_3137 Geobacter uraniireducens Rf4 putative GAF sensor protein YP_001231871.1 3707803 R 351605 CDS YP_001231872.1 148265166 5165008 complement(3708651..3709736) 1 NC_009483.1 PFAM: CheB methylesterase; response regulator receiver; response regulator receiver modulated CheB methylesterase 3709736 5165008 Gura_3138 Geobacter uraniireducens Rf4 response regulator receiver modulated CheB methylesterase YP_001231872.1 3708651 R 351605 CDS YP_001231873.1 148265167 5165009 complement(3709733..3710608) 1 NC_009483.1 PFAM: MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase 3710608 5165009 Gura_3139 Geobacter uraniireducens Rf4 protein-glutamate O-methyltransferase YP_001231873.1 3709733 R 351605 CDS YP_001231874.1 148265168 5163544 complement(3710608..3712620) 1 NC_009483.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; HEAT repeat-containing PBS lyase 3712620 5163544 Gura_3140 Geobacter uraniireducens Rf4 HEAT repeat-containing PBS lyase YP_001231874.1 3710608 R 351605 CDS YP_001231875.1 148265169 5163545 complement(3712660..3713634) 1 NC_009483.1 TIGRFAM: MJ0042 family finger-like protein; PFAM: response regulator receiver; response regulator receiver protein 3713634 5163545 Gura_3141 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001231875.1 3712660 R 351605 CDS YP_001231876.1 148265170 5163546 complement(3713658..3714140) 1 NC_009483.1 PFAM: CheW domain protein; putative CheW protein 3714140 5163546 Gura_3142 Geobacter uraniireducens Rf4 putative CheW protein YP_001231876.1 3713658 R 351605 CDS YP_001231877.1 148265171 5165519 complement(3714197..3714571) 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 3714571 5165519 Gura_3143 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001231877.1 3714197 R 351605 CDS YP_001231878.1 148265172 5165520 complement(3714589..3715377) 1 NC_009483.1 PFAM: CheW domain protein; putative CheW protein 3715377 5165520 Gura_3144 Geobacter uraniireducens Rf4 putative CheW protein YP_001231878.1 3714589 R 351605 CDS YP_001231879.1 148265173 5165521 complement(3715396..3716196) 1 NC_009483.1 SMART: AAA ATPase; ATPase AAA 3716196 5165521 Gura_3145 Geobacter uraniireducens Rf4 ATPase AAA YP_001231879.1 3715396 R 351605 CDS YP_001231880.1 148265174 5163874 complement(3716197..3718212) 1 NC_009483.1 PFAM: CheW domain protein; ATP-binding region, ATPase domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; CheA signal transduction histidine kinase 3718212 5163874 Gura_3146 Geobacter uraniireducens Rf4 CheA signal transduction histidine kinase YP_001231880.1 3716197 R 351605 CDS YP_001231881.1 148265175 5163875 complement(3718276..3718641) 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 3718641 5163875 Gura_3147 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001231881.1 3718276 R 351605 CDS YP_001231882.1 148265176 5163876 complement(3718638..3720341) 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 3720341 5163876 Gura_3148 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001231882.1 3718638 R 351605 CDS YP_001231883.1 148265177 5165482 complement(3720423..3721748) 1 NC_009483.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 3721748 engA 5165482 engA Geobacter uraniireducens Rf4 GTP-binding protein EngA YP_001231883.1 3720423 R 351605 CDS YP_001231884.1 148265178 5165483 complement(3721745..3722638) 1 NC_009483.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 3722638 era 5165483 era Geobacter uraniireducens Rf4 GTP-binding protein Era YP_001231884.1 3721745 R 351605 CDS YP_001231885.1 148265179 5165484 complement(3722724..3723779) 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 3723779 5165484 Gura_3151 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001231885.1 3722724 R 351605 CDS YP_001231886.1 148265180 5164063 complement(3723776..3724498) 1 NC_009483.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; ribonuclease III 3724498 5164063 Gura_3152 Geobacter uraniireducens Rf4 ribonuclease III YP_001231886.1 3723776 R 351605 CDS YP_001231887.1 148265181 5164064 3724865..3725506 1 NC_009483.1 PFAM: thymidylate kinase; dTMP kinase 3725506 5164064 Gura_3153 Geobacter uraniireducens Rf4 dTMP kinase YP_001231887.1 3724865 D 351605 CDS YP_001231888.1 148265182 5164065 3725509..3726471 1 NC_009483.1 TIGRFAM: DNA polymerase III, delta prime subunit; DNA polymerase III subunit delta' 3726471 5164065 Gura_3154 Geobacter uraniireducens Rf4 DNA polymerase III subunit delta' YP_001231888.1 3725509 D 351605 CDS YP_001231889.1 148265183 5165106 3726543..3727490 1 NC_009483.1 PFAM: PSP1 domain protein; PSP1 domain-containing protein 3727490 5165106 Gura_3155 Geobacter uraniireducens Rf4 PSP1 domain-containing protein YP_001231889.1 3726543 D 351605 CDS YP_001231890.1 148265184 5165107 3727490..3729019 1 NC_009483.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 3729019 5165107 Gura_3156 Geobacter uraniireducens Rf4 methionyl-tRNA synthetase YP_001231890.1 3727490 D 351605 CDS YP_001231891.1 148265185 5165108 complement(3729163..3729762) 1 NC_009483.1 PFAM: protein of unknown function DUF218; hypothetical protein 3729762 5165108 Gura_3157 Geobacter uraniireducens Rf4 hypothetical protein YP_001231891.1 3729163 R 351605 CDS YP_001231892.1 148265186 5165082 3729871..3730062 1 NC_009483.1 required for 70S ribosome assembly; 50S ribosomal protein L28 3730062 rpmB 5165082 rpmB Geobacter uraniireducens Rf4 50S ribosomal protein L28 YP_001231892.1 3729871 D 351605 CDS YP_001231893.1 148265187 5165083 complement(3730220..3730603) 1 NC_009483.1 TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; putative endoribonuclease L-PSP 3730603 5165083 Gura_3159 Geobacter uraniireducens Rf4 putative endoribonuclease L-PSP YP_001231893.1 3730220 R 351605 CDS YP_001231894.1 148265188 5165084 complement(3730692..3732842) 1 NC_009483.1 TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region; (p)ppGpp synthetase I SpoT/RelA 3732842 5165084 Gura_3160 Geobacter uraniireducens Rf4 (p)ppGpp synthetase I SpoT/RelA YP_001231894.1 3730692 R 351605 CDS YP_001231895.1 148265189 5164326 complement(3732956..3733165) 1 NC_009483.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; DNA-directed RNA polymerase subunit omega 3733165 5164326 Gura_3161 Geobacter uraniireducens Rf4 DNA-directed RNA polymerase subunit omega YP_001231895.1 3732956 R 351605 CDS YP_001231896.1 148265190 5164327 complement(3733205..3733813) 1 NC_009483.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 3733813 gmk 5164327 gmk Geobacter uraniireducens Rf4 guanylate kinase YP_001231896.1 3733205 R 351605 CDS YP_001231897.1 148265191 5164328 complement(3733927..3734805) 1 NC_009483.1 PFAM: YicC N-terminal domain protein; domain of unknown function DUF1732; hypothetical protein 3734805 5164328 Gura_3163 Geobacter uraniireducens Rf4 hypothetical protein YP_001231897.1 3733927 R 351605 CDS YP_001231898.1 148265192 5163712 complement(3734873..3735274) 1 NC_009483.1 PFAM: PilT protein domain protein; PilT domain-containing protein 3735274 5163712 Gura_3164 Geobacter uraniireducens Rf4 PilT domain-containing protein YP_001231898.1 3734873 R 351605 CDS YP_001231899.1 148265193 5163713 complement(3735271..3735519) 1 NC_009483.1 PFAM: CopG domain protein DNA-binding domain protein; CopG/DNA-binding domain-containing protein 3735519 5163713 Gura_3165 Geobacter uraniireducens Rf4 CopG/DNA-binding domain-containing protein YP_001231899.1 3735271 R 351605 CDS YP_001231900.1 148265194 5163714 complement(3735687..3735887) 1 NC_009483.1 hypothetical protein 3735887 5163714 Gura_3166 Geobacter uraniireducens Rf4 hypothetical protein YP_001231900.1 3735687 R 351605 CDS YP_001231901.1 148265195 5163576 complement(3736047..3736907) 1 NC_009483.1 hypothetical protein 3736907 5163576 Gura_3167 Geobacter uraniireducens Rf4 hypothetical protein YP_001231901.1 3736047 R 351605 CDS YP_001231902.1 148265196 5163577 complement(3736927..3737895) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 3737895 5163577 Gura_3168 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231902.1 3736927 R 351605 CDS YP_001231903.1 148265197 5163578 complement(3737906..3739276) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 3739276 5163578 Gura_3169 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001231903.1 3737906 R 351605 CDS YP_001231904.1 148265198 5163123 complement(3739296..3740279) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 3740279 5163123 Gura_3170 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231904.1 3739296 R 351605 CDS YP_001231905.1 148265199 5163124 complement(3740387..3741370) 1 NC_009483.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; UDP-glucose 4-epimerase 3741370 5163124 Gura_3171 Geobacter uraniireducens Rf4 UDP-glucose 4-epimerase YP_001231905.1 3740387 R 351605 CDS YP_001231906.1 148265200 5163125 complement(3741419..3741910) 1 NC_009483.1 hypothetical protein 3741910 5163125 Gura_3172 Geobacter uraniireducens Rf4 hypothetical protein YP_001231906.1 3741419 R 351605 CDS YP_001231907.1 148265201 5166128 complement(3741900..3742271) 1 NC_009483.1 PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 3742271 5166128 Gura_3173 Geobacter uraniireducens Rf4 DNA polymerase subunit beta YP_001231907.1 3741900 R 351605 CDS YP_001231908.1 148265202 5166129 complement(3742479..3742709) 1 NC_009483.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; AbrB family transcriptional regulator 3742709 5166129 Gura_3174 Geobacter uraniireducens Rf4 AbrB family transcriptional regulator YP_001231908.1 3742479 R 351605 CDS YP_001231909.1 148265203 5166130 3743083..3744330 1 NC_009483.1 ATPase AAA 3744330 5166130 Gura_3175 Geobacter uraniireducens Rf4 ATPase AAA YP_001231909.1 3743083 D 351605 CDS YP_001231910.1 148265204 5164303 complement(3744353..3746035) 1 NC_009483.1 hypothetical protein 3746035 5164303 Gura_3176 Geobacter uraniireducens Rf4 hypothetical protein YP_001231910.1 3744353 R 351605 CDS YP_001231911.1 148265205 5164304 complement(3746100..3747509) 1 NC_009483.1 PFAM: sugar transferase; undecaprenyl-phosphate galactose phosphotransferase 3747509 5164304 Gura_3177 Geobacter uraniireducens Rf4 undecaprenyl-phosphate galactose phosphotransferase YP_001231911.1 3746100 R 351605 CDS YP_001231912.1 148265206 5164305 3747733..3748689 1 NC_009483.1 hypothetical protein 3748689 5164305 Gura_3178 Geobacter uraniireducens Rf4 hypothetical protein YP_001231912.1 3747733 D 351605 CDS YP_001231913.1 148265207 5164998 complement(3748910..3749854) 1 NC_009483.1 hypothetical protein 3749854 5164998 Gura_3179 Geobacter uraniireducens Rf4 hypothetical protein YP_001231913.1 3748910 R 351605 CDS YP_001231914.1 148265208 5164999 complement(3749851..3750939) 1 NC_009483.1 phosphoglycerol transferase/alkaline phosphatase superfamily protein-like protein 3750939 5164999 Gura_3180 Geobacter uraniireducens Rf4 phosphoglycerol transferase/alkaline phosphatase superfamily protein-like protein YP_001231914.1 3749851 R 351605 CDS YP_001231915.1 148265209 5165000 3751031..3752272 1 NC_009483.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 3752272 5165000 Gura_3181 Geobacter uraniireducens Rf4 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001231915.1 3751031 D 351605 CDS YP_001231916.1 148265210 5164098 complement(3752876..3754096) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 3754096 5164098 Gura_3182 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001231916.1 3752876 R 351605 CDS YP_001231917.1 148265211 5164099 complement(3754156..3755370) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 3755370 5164099 Gura_3183 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001231917.1 3754156 R 351605 CDS YP_001231918.1 148265212 5164100 complement(3755374..3756663) 1 NC_009483.1 hypothetical protein 3756663 5164100 Gura_3184 Geobacter uraniireducens Rf4 hypothetical protein YP_001231918.1 3755374 R 351605 CDS YP_001231919.1 148265213 5164830 complement(3756666..3757559) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 3757559 5164830 Gura_3185 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231919.1 3756666 R 351605 CDS YP_001231920.1 148265214 5164831 complement(3757552..3758682) 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 3758682 5164831 Gura_3186 Geobacter uraniireducens Rf4 NAD-dependent epimerase/dehydratase YP_001231920.1 3757552 R 351605 CDS YP_001231921.1 148265215 5164832 complement(3758682..3759290) 1 NC_009483.1 PFAM: transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 3759290 5164832 Gura_3187 Geobacter uraniireducens Rf4 hexapaptide repeat-containing transferase YP_001231921.1 3758682 R 351605 CDS YP_001231922.1 148265216 5163617 complement(3759312..3760211) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 3760211 5163617 Gura_3188 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231922.1 3759312 R 351605 CDS YP_001231923.1 148265217 5163618 complement(3760208..3761452) 1 NC_009483.1 PFAM: polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 3761452 5163618 Gura_3189 Geobacter uraniireducens Rf4 polysaccharide biosynthesis protein YP_001231923.1 3760208 R 351605 CDS YP_001231924.1 148265218 5163619 complement(3761455..3762555) 1 NC_009483.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; glutamine--scyllo-inositol transaminase 3762555 5163619 Gura_3190 Geobacter uraniireducens Rf4 glutamine--scyllo-inositol transaminase YP_001231924.1 3761455 R 351605 CDS YP_001231925.1 148265219 5165588 complement(3762552..3762968) 1 NC_009483.1 PFAM: WxcM domain protein, C-terminal domain protein; WxcM domain-containing protein 3762968 5165588 Gura_3191 Geobacter uraniireducens Rf4 WxcM domain-containing protein YP_001231925.1 3762552 R 351605 CDS YP_001231926.1 148265220 5165589 complement(3762971..3763702) 1 NC_009483.1 PFAM: Methyltransferase type 12; type 12 methyltransferase 3763702 5165589 Gura_3192 Geobacter uraniireducens Rf4 type 12 methyltransferase YP_001231926.1 3762971 R 351605 CDS YP_001231927.1 148265221 5165590 complement(3763699..3764115) 1 NC_009483.1 hypothetical protein 3764115 5165590 Gura_3193 Geobacter uraniireducens Rf4 hypothetical protein YP_001231927.1 3763699 R 351605 CDS YP_001231928.1 148265222 5165982 complement(3764126..3764710) 1 NC_009483.1 hypothetical protein 3764710 5165982 Gura_3194 Geobacter uraniireducens Rf4 hypothetical protein YP_001231928.1 3764126 R 351605 CDS YP_001231929.1 148265223 5165983 complement(3764700..3764942) 1 NC_009483.1 hypothetical protein 3764942 5165983 Gura_3195 Geobacter uraniireducens Rf4 hypothetical protein YP_001231929.1 3764700 R 351605 CDS YP_001231930.1 148265224 5165984 complement(3764952..3766637) 1 NC_009483.1 TIGRFAM: HAD-superfamily phosphatase, subfamily IIIC; FkbH like protein; FkbH-like protein 3766637 5165984 Gura_3196 Geobacter uraniireducens Rf4 FkbH-like protein YP_001231930.1 3764952 R 351605 CDS YP_001231931.1 148265225 5163289 complement(3766766..3767038) 1 NC_009483.1 hypothetical protein 3767038 5163289 Gura_3197 Geobacter uraniireducens Rf4 hypothetical protein YP_001231931.1 3766766 R 351605 CDS YP_001231932.1 148265226 5163290 complement(3767114..3767401) 1 NC_009483.1 hypothetical protein 3767401 5163290 Gura_3198 Geobacter uraniireducens Rf4 hypothetical protein YP_001231932.1 3767114 R 351605 CDS YP_001231933.1 148265227 5163291 complement(3767710..3768000) 1 NC_009483.1 TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; addiction module antitoxin 3768000 5163291 Gura_3199 Geobacter uraniireducens Rf4 addiction module antitoxin YP_001231933.1 3767710 R 351605 CDS YP_001231934.1 148265228 5165285 complement(3767985..3768173) 1 NC_009483.1 hypothetical protein 3768173 5165285 Gura_3200 Geobacter uraniireducens Rf4 hypothetical protein YP_001231934.1 3767985 R 351605 CDS YP_001231935.1 148265229 5165286 complement(3768339..3768590) 1 NC_009483.1 hypothetical protein 3768590 5165286 Gura_3201 Geobacter uraniireducens Rf4 hypothetical protein YP_001231935.1 3768339 R 351605 CDS YP_001231936.1 148265230 5165287 complement(3768814..3769197) 1 NC_009483.1 PFAM: protein of unknown function DUF86; hypothetical protein 3769197 5165287 Gura_3202 Geobacter uraniireducens Rf4 hypothetical protein YP_001231936.1 3768814 R 351605 CDS YP_001231937.1 148265231 5165274 complement(3769181..3769477) 1 NC_009483.1 PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 3769477 5165274 Gura_3203 Geobacter uraniireducens Rf4 DNA polymerase subunit beta YP_001231937.1 3769181 R 351605 CDS YP_001231938.1 148265232 5165275 complement(3769494..3769742) 1 NC_009483.1 hypothetical protein 3769742 5165275 Gura_3204 Geobacter uraniireducens Rf4 hypothetical protein YP_001231938.1 3769494 R 351605 CDS YP_001231939.1 148265233 5165276 complement(3769880..3770290) 1 NC_009483.1 hypothetical protein 3770290 5165276 Gura_3205 Geobacter uraniireducens Rf4 hypothetical protein YP_001231939.1 3769880 R 351605 CDS YP_001231940.1 148265234 5165709 complement(3770349..3770651) 1 NC_009483.1 hypothetical protein 3770651 5165709 Gura_3206 Geobacter uraniireducens Rf4 hypothetical protein YP_001231940.1 3770349 R 351605 CDS YP_001231941.1 148265235 5165710 complement(3770648..3770863) 1 NC_009483.1 hypothetical protein 3770863 5165710 Gura_3207 Geobacter uraniireducens Rf4 hypothetical protein YP_001231941.1 3770648 R 351605 CDS YP_001231942.1 148265236 5165711 complement(3770952..3771284) 1 NC_009483.1 hypothetical protein 3771284 5165711 Gura_3208 Geobacter uraniireducens Rf4 hypothetical protein YP_001231942.1 3770952 R 351605 CDS YP_001231943.1 148265237 5166115 complement(3771366..3772409) 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase 3772409 5166115 Gura_3209 Geobacter uraniireducens Rf4 NAD-dependent epimerase/dehydratase YP_001231943.1 3771366 R 351605 CDS YP_001231944.1 148265238 5166116 complement(3772495..3773544) 1 NC_009483.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; GDP-mannose 4,6-dehydratase 3773544 5166116 Gura_3210 Geobacter uraniireducens Rf4 GDP-mannose 4,6-dehydratase YP_001231944.1 3772495 R 351605 CDS YP_001231945.1 148265239 5166117 complement(3773662..3775134) 1 NC_009483.1 TIGRFAM: cytidyltransferase-related domain; rfaE bifunctional protein; PFAM: cytidylyltransferase; PfkB domain protein; rfaE bifunctional protein 3775134 5166117 Gura_3211 Geobacter uraniireducens Rf4 rfaE bifunctional protein YP_001231945.1 3773662 R 351605 CDS YP_001231946.1 148265240 5167037 complement(3775191..3775565) 1 NC_009483.1 PFAM: S23 ribosomal protein; S23 ribosomal protein 3775565 5167037 Gura_3212 Geobacter uraniireducens Rf4 S23 ribosomal protein YP_001231946.1 3775191 R 351605 CDS YP_001231947.1 148265241 5167038 complement(3775592..3776542) 1 NC_009483.1 hypothetical protein 3776542 5167038 Gura_3213 Geobacter uraniireducens Rf4 hypothetical protein YP_001231947.1 3775592 R 351605 CDS YP_001231948.1 148265242 5167039 complement(3776727..3777767) 1 NC_009483.1 TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase, family 9; lipopolysaccharide heptosyltransferase I 3777767 5167039 Gura_3214 Geobacter uraniireducens Rf4 lipopolysaccharide heptosyltransferase I YP_001231948.1 3776727 R 351605 CDS YP_001231949.1 148265243 5165186 complement(3777787..3778830) 1 NC_009483.1 PFAM: glycosyl transferase, family 9; glycosyl transferase family protein 3778830 5165186 Gura_3215 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231949.1 3777787 R 351605 CDS YP_001231950.1 148265244 5165187 complement(3778932..3779177) 1 NC_009483.1 hypothetical protein 3779177 5165187 Gura_3216 Geobacter uraniireducens Rf4 hypothetical protein YP_001231950.1 3778932 R 351605 CDS YP_001231951.1 148265245 5165188 complement(join(3779364..3780179,3780178..3780534)) 1 NC_009483.1 hypothetical protein 3780534 5165188 Gura_3217 Geobacter uraniireducens Rf4 hypothetical protein YP_001231951.1 3779364 R 351605 CDS YP_001231952.1 148265246 5166229 complement(3780550..3781290) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 3781290 5166229 Gura_3218 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231952.1 3780550 R 351605 CDS YP_001231953.1 148265247 5166230 complement(3781361..3782167) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 3782167 5166230 Gura_3219 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231953.1 3781361 R 351605 CDS YP_001231954.1 148265248 5166231 complement(3782344..3783438) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 3783438 5166231 Gura_3220 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001231954.1 3782344 R 351605 CDS YP_001231955.1 148265249 5166396 complement(3783435..3784421) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 3784421 5166396 Gura_3221 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231955.1 3783435 R 351605 CDS YP_001231956.1 148265250 5166397 complement(3784478..3785575) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 3785575 5166397 Gura_3222 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001231956.1 3784478 R 351605 CDS YP_001231957.1 148265251 5166398 complement(3785632..3786612) 1 NC_009483.1 ADP-heptose--LPS heptosyltransferase-like protein 3786612 5166398 Gura_3223 Geobacter uraniireducens Rf4 ADP-heptose--LPS heptosyltransferase-like protein YP_001231957.1 3785632 R 351605 CDS YP_001231958.1 148265252 5164827 complement(3786735..3787556) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 3787556 5164827 Gura_3224 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231958.1 3786735 R 351605 CDS YP_001231959.1 148265253 5164828 complement(3787570..3788355) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 3788355 5164828 Gura_3225 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231959.1 3787570 R 351605 CDS YP_001231960.1 148265254 5164829 complement(3788339..3789433) 1 NC_009483.1 PFAM: glycosyl transferase, family 9; glycosyl transferase family protein 3789433 5164829 Gura_3226 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001231960.1 3788339 R 351605 CDS YP_001231961.1 148265255 5166253 complement(3789447..3789617) 1 NC_009483.1 PFAM: protein of unknown function DUF343; hypothetical protein 3789617 5166253 Gura_3227 Geobacter uraniireducens Rf4 hypothetical protein YP_001231961.1 3789447 R 351605 CDS YP_001231962.1 148265256 5166254 complement(3789627..3790709) 1 NC_009483.1 TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase 3790709 5166254 Gura_3228 Geobacter uraniireducens Rf4 tetraacyldisaccharide 4'-kinase YP_001231962.1 3789627 R 351605 CDS YP_001231963.1 148265257 5166255 complement(3790945..3792348) 1 NC_009483.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; 3-deoxy-D-manno-octulosonic-acid transferase 3792348 5166255 Gura_3229 Geobacter uraniireducens Rf4 3-deoxy-D-manno-octulosonic-acid transferase YP_001231963.1 3790945 R 351605 CDS YP_001231964.1 148265258 5165549 complement(3792355..3793311) 1 NC_009483.1 PFAM: lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase 3793311 5165549 Gura_3230 Geobacter uraniireducens Rf4 lipid A biosynthesis acyltransferase YP_001231964.1 3792355 R 351605 CDS YP_001231965.1 148265259 5165550 complement(3793308..3795026) 1 NC_009483.1 TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA 3795026 5165550 Gura_3231 Geobacter uraniireducens Rf4 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA YP_001231965.1 3793308 R 351605 CDS YP_001231966.1 148265260 5165551 complement(3795040..3796158) 1 NC_009483.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 3796158 lpxB 5165551 lpxB Geobacter uraniireducens Rf4 lipid-A-disaccharide synthase YP_001231966.1 3795040 R 351605 CDS YP_001231967.1 148265261 5165619 complement(3796296..3797072) 1 NC_009483.1 TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 3797072 5165619 Gura_3233 Geobacter uraniireducens Rf4 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase YP_001231967.1 3796296 R 351605 CDS YP_001231968.1 148265262 5165620 complement(3797088..3797528) 1 NC_009483.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 3797528 fabZ 5165620 fabZ Geobacter uraniireducens Rf4 (3R)-hydroxymyristoyl-ACP dehydratase YP_001231968.1 3797088 R 351605 CDS YP_001231969.1 148265263 5165621 complement(3797583..3798629) 1 NC_009483.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 3798629 lpxD 5165621 lpxD Geobacter uraniireducens Rf4 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_001231969.1 3797583 R 351605 CDS YP_001231970.1 148265264 5165271 complement(3798740..3799264) 1 NC_009483.1 PFAM: outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 3799264 5165271 Gura_3236 Geobacter uraniireducens Rf4 outer membrane chaperone Skp YP_001231970.1 3798740 R 351605 CDS YP_001231971.1 148265265 5165272 complement(3799285..3801594) 1 NC_009483.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; surface antigen (D15) 3801594 5165272 Gura_3237 Geobacter uraniireducens Rf4 surface antigen (D15) YP_001231971.1 3799285 R 351605 CDS YP_001231972.1 148265266 5165273 complement(3801719..3802390) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3802390 5165273 Gura_3238 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001231972.1 3801719 R 351605 CDS YP_001231973.1 148265267 5165858 complement(3802383..3803657) 1 NC_009483.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; LolC/E family lipoprotein releasing system, transmembrane protein 3803657 5165858 Gura_3239 Geobacter uraniireducens Rf4 LolC/E family lipoprotein releasing system, transmembrane protein YP_001231973.1 3802383 R 351605 CDS YP_001231974.1 148265268 5165859 complement(3803658..3805142) 1 NC_009483.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; lysyl-tRNA synthetase 3805142 5165859 Gura_3240 Geobacter uraniireducens Rf4 lysyl-tRNA synthetase YP_001231974.1 3803658 R 351605 CDS YP_001231975.1 148265269 5165860 3805344..3807029 1 NC_009483.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 3807029 5165860 Gura_3241 Geobacter uraniireducens Rf4 putative ABC transporter ATP-binding protein YP_001231975.1 3805344 D 351605 CDS YP_001231976.1 148265270 5166751 complement(3807310..3808185) 1 NC_009483.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 3808185 hisG 5166751 hisG Geobacter uraniireducens Rf4 ATP phosphoribosyltransferase YP_001231976.1 3807310 R 351605 CDS YP_001231977.1 148265271 5166752 complement(3808237..3808614) 1 NC_009483.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 3808614 hisI 5166752 hisI Geobacter uraniireducens Rf4 phosphoribosyl-AMP cyclohydrolase YP_001231977.1 3808237 R 351605 CDS YP_001231978.1 148265272 5166753 complement(3808684..3809526) 1 NC_009483.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 3809526 5166753 Gura_3244 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001231978.1 3808684 R 351605 CDS YP_001231979.1 148265273 5163212 complement(3809728..3810543) 1 NC_009483.1 PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 3810543 5163212 Gura_3245 Geobacter uraniireducens Rf4 alpha/beta hydrolase fold protein YP_001231979.1 3809728 R 351605 CDS YP_001231980.1 148265274 5163213 complement(3810582..3811757) 1 NC_009483.1 TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase, class I and II; 8-amino-7-oxononanoate synthase 3811757 5163213 Gura_3246 Geobacter uraniireducens Rf4 8-amino-7-oxononanoate synthase YP_001231980.1 3810582 R 351605 CDS YP_001231981.1 148265275 5163214 complement(3811859..3812995) 1 NC_009483.1 PFAM: metallophosphoesterase; metallophosphoesterase 3812995 5163214 Gura_3247 Geobacter uraniireducens Rf4 metallophosphoesterase YP_001231981.1 3811859 R 351605 CDS YP_001231982.1 148265276 5164318 complement(3818754..3819005) 1 NC_009483.1 hypothetical protein 3819005 5164318 Gura_3248 Geobacter uraniireducens Rf4 hypothetical protein YP_001231982.1 3818754 R 351605 CDS YP_001231983.1 148265277 5164319 complement(3819028..3820314) 1 NC_009483.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase 3820314 5164319 Gura_3249 Geobacter uraniireducens Rf4 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_001231983.1 3819028 R 351605 CDS YP_001231984.1 148265278 5163967 complement(3820427..3821926) 1 NC_009483.1 amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 3821926 5163967 Gura_3250 Geobacter uraniireducens Rf4 4-alpha-glucanotransferase YP_001231984.1 3820427 R 351605 CDS YP_001231985.1 148265279 5163968 3822112..3822276 1 NC_009483.1 hypothetical protein 3822276 5163968 Gura_3251 Geobacter uraniireducens Rf4 hypothetical protein YP_001231985.1 3822112 D 351605 CDS YP_001231986.1 148265280 5163969 complement(3822270..3824123) 1 NC_009483.1 TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 3824123 5163969 Gura_3252 Geobacter uraniireducens Rf4 ATP-dependent metalloprotease FtsH YP_001231986.1 3822270 R 351605 CDS YP_001231987.1 148265281 5163937 complement(3824227..3825180) 1 NC_009483.1 hypothetical protein 3825180 5163937 Gura_3253 Geobacter uraniireducens Rf4 hypothetical protein YP_001231987.1 3824227 R 351605 CDS YP_001231988.1 148265282 5163938 3825419..3826222 1 NC_009483.1 hypothetical protein 3826222 5163938 Gura_3254 Geobacter uraniireducens Rf4 hypothetical protein YP_001231988.1 3825419 D 351605 CDS YP_001231989.1 148265283 5163939 complement(3826534..3827289) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; succinate dehydrogenase/fumarate reductase iron-sulfur subunit 3827289 5163939 Gura_3255 Geobacter uraniireducens Rf4 succinate dehydrogenase/fumarate reductase iron-sulfur subunit YP_001231989.1 3826534 R 351605 CDS YP_001231990.1 148265284 5166167 complement(3827289..3829205) 1 NC_009483.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 3829205 sdhA 5166167 sdhA Geobacter uraniireducens Rf4 succinate dehydrogenase flavoprotein subunit YP_001231990.1 3827289 R 351605 CDS YP_001231991.1 148265285 5166168 complement(3829216..3829875) 1 NC_009483.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; succinate dehydrogenase/fumarate reductase cytochrome b subunit 3829875 5166168 Gura_3257 Geobacter uraniireducens Rf4 succinate dehydrogenase/fumarate reductase cytochrome b subunit YP_001231991.1 3829216 R 351605 CDS YP_001231992.1 148265286 5166169 3830318..3831424 1 NC_009483.1 TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 3831424 5166169 Gura_3258 Geobacter uraniireducens Rf4 queuine tRNA-ribosyltransferase YP_001231992.1 3830318 D 351605 CDS YP_001231993.1 148265287 5166407 3831472..3832263 1 NC_009483.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 3832263 mazG 5166407 mazG Geobacter uraniireducens Rf4 nucleoside triphosphate pyrophosphohydrolase YP_001231993.1 3831472 D 351605 CDS YP_001231994.1 148265288 5166408 complement(3832526..3833101) 1 NC_009483.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase 3833101 5166408 Gura_3260 Geobacter uraniireducens Rf4 methylated-DNA--protein-cysteine methyltransferase YP_001231994.1 3832526 R 351605 CDS YP_001231995.1 148265289 5166409 complement(3833114..3834682) 1 NC_009483.1 TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; integral membrane protein MviN 3834682 5166409 Gura_3261 Geobacter uraniireducens Rf4 integral membrane protein MviN YP_001231995.1 3833114 R 351605 CDS YP_001231996.1 148265290 5166078 complement(3834751..3834990) 1 NC_009483.1 hypothetical protein 3834990 5166078 Gura_3262 Geobacter uraniireducens Rf4 hypothetical protein YP_001231996.1 3834751 R 351605 CDS YP_001231997.1 148265291 5166080 complement(3836168..3837337) 1 NC_009483.1 PFAM: class II aldolase/adducin family protein; class II aldolase/adducin family protein 3837337 5166080 Gura_3265 Geobacter uraniireducens Rf4 class II aldolase/adducin family protein YP_001231997.1 3836168 R 351605 CDS YP_001231998.1 148265292 5164393 complement(3837468..3838535) 1 NC_009483.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase 3838535 5164393 Gura_3266 Geobacter uraniireducens Rf4 diguanylate cyclase YP_001231998.1 3837468 R 351605 CDS YP_001231999.1 148265293 5164394 complement(3838678..3838953) 1 NC_009483.1 hypothetical protein 3838953 5164394 Gura_3267 Geobacter uraniireducens Rf4 hypothetical protein YP_001231999.1 3838678 R 351605 CDS YP_001232000.1 148265294 5164395 complement(3838957..3839220) 1 NC_009483.1 hypothetical protein 3839220 5164395 Gura_3268 Geobacter uraniireducens Rf4 hypothetical protein YP_001232000.1 3838957 R 351605 CDS YP_001232001.1 148265295 5163773 complement(3839354..3841093) 1 NC_009483.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase-like; aldehyde ferredoxin oxidoreductase 3841093 5163773 Gura_3269 Geobacter uraniireducens Rf4 aldehyde ferredoxin oxidoreductase YP_001232001.1 3839354 R 351605 CDS YP_001232002.1 148265296 5163774 complement(3841179..3842255) 1 NC_009483.1 PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; nucleotidyl transferase 3842255 5163774 Gura_3270 Geobacter uraniireducens Rf4 nucleotidyl transferase YP_001232002.1 3841179 R 351605 CDS YP_001232003.1 148265297 5163775 complement(3842341..3842706) 1 NC_009483.1 PFAM: mannose-6-phosphate isomerase, type II; Cupin 2, conserved barrel domain protein; mannose-6-phosphate isomerase 3842706 5163775 Gura_3271 Geobacter uraniireducens Rf4 mannose-6-phosphate isomerase YP_001232003.1 3842341 R 351605 CDS YP_001232004.1 148265298 5166146 complement(3842706..3843536) 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 3843536 5166146 Gura_3272 Geobacter uraniireducens Rf4 dTDP-4-dehydrorhamnose reductase YP_001232004.1 3842706 R 351605 CDS YP_001232005.1 148265299 5166147 complement(3843536..3844609) 1 NC_009483.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; dTDP-glucose 4,6-dehydratase 3844609 5166147 Gura_3273 Geobacter uraniireducens Rf4 dTDP-glucose 4,6-dehydratase YP_001232005.1 3843536 R 351605 CDS YP_001232006.1 148265300 5166148 complement(3844648..3846123) 1 NC_009483.1 hypothetical protein 3846123 5166148 Gura_3274 Geobacter uraniireducens Rf4 hypothetical protein YP_001232006.1 3844648 R 351605 CDS YP_001232007.1 148265301 5163721 complement(3846137..3847927) 1 NC_009483.1 adenine-specific DNA methylase 3847927 5163721 Gura_3275 Geobacter uraniireducens Rf4 adenine-specific DNA methylase YP_001232007.1 3846137 R 351605 CDS YP_001232008.1 148265302 5163722 complement(3847961..3850093) 1 NC_009483.1 PFAM: OstA family protein; Organic solvent tolerance protein; organic solvent tolerance protein 3850093 5163722 Gura_3276 Geobacter uraniireducens Rf4 organic solvent tolerance protein YP_001232008.1 3847961 R 351605 CDS YP_001232009.1 148265303 5163723 complement(3850093..3851367) 1 NC_009483.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 3851367 5163723 Gura_3277 Geobacter uraniireducens Rf4 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_001232009.1 3850093 R 351605 CDS YP_001232010.1 148265304 5163286 complement(3851435..3851659) 1 NC_009483.1 hypothetical protein 3851659 5163286 Gura_3278 Geobacter uraniireducens Rf4 hypothetical protein YP_001232010.1 3851435 R 351605 CDS YP_001232011.1 148265305 5163287 complement(3851830..3852678) 1 NC_009483.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta 3852678 5163287 Gura_3279 Geobacter uraniireducens Rf4 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_001232011.1 3851830 R 351605 CDS YP_001232012.1 148265306 5163288 complement(3852832..3853635) 1 NC_009483.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 3853635 trpA 5163288 trpA Geobacter uraniireducens Rf4 tryptophan synthase subunit alpha YP_001232012.1 3852832 R 351605 CDS YP_001232013.1 148265307 5164271 complement(3853661..3855871) 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3855871 5164271 Gura_3281 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001232013.1 3853661 R 351605 CDS YP_001232014.1 148265308 5164272 complement(3855948..3856307) 1 NC_009483.1 hypothetical protein 3856307 5164272 Gura_3282 Geobacter uraniireducens Rf4 hypothetical protein YP_001232014.1 3855948 R 351605 CDS YP_001232015.1 148265309 5164273 complement(3856342..3857694) 1 NC_009483.1 hypothetical protein 3857694 5164273 Gura_3283 Geobacter uraniireducens Rf4 hypothetical protein YP_001232015.1 3856342 R 351605 CDS YP_001232016.1 148265310 5165961 3857969..3859750 1 NC_009483.1 hypothetical protein 3859750 5165961 Gura_3284 Geobacter uraniireducens Rf4 hypothetical protein YP_001232016.1 3857969 D 351605 CDS YP_001232017.1 148265311 5165962 complement(3859834..3861744) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3861744 5165962 Gura_3285 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001232017.1 3859834 R 351605 CDS YP_001232018.1 148265312 5165963 complement(3861741..3862238) 1 NC_009483.1 SMART: Water Stress and Hypersensitive response; water stress/hypersensitive response protein 3862238 5165963 Gura_3286 Geobacter uraniireducens Rf4 water stress/hypersensitive response protein YP_001232018.1 3861741 R 351605 CDS YP_001232019.1 148265313 5163006 complement(3862352..3862999) 1 NC_009483.1 hypothetical protein 3862999 5163006 Gura_3287 Geobacter uraniireducens Rf4 hypothetical protein YP_001232019.1 3862352 R 351605 CDS YP_001232020.1 148265314 5163007 complement(3863379..3864572) 1 NC_009483.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 3864572 5163007 Gura_3288 Geobacter uraniireducens Rf4 tryptophan synthase subunit beta YP_001232020.1 3863379 R 351605 CDS YP_001232021.1 148265315 5163008 complement(3864774..3867872) 1 NC_009483.1 PFAM: acriflavin resistance protein; acriflavin resistance protein 3867872 5163008 Gura_3289 Geobacter uraniireducens Rf4 acriflavin resistance protein YP_001232021.1 3864774 R 351605 CDS YP_001232022.1 148265316 5167074 3870676..3871353 1 NC_009483.1 PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 3871353 5167074 Gura_3292 Geobacter uraniireducens Rf4 two component transcriptional regulator YP_001232022.1 3870676 D 351605 CDS YP_001232023.1 148265317 5166331 3871411..3871893 1 NC_009483.1 PFAM: tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 3871893 5166331 Gura_3293 Geobacter uraniireducens Rf4 tRNA/rRNA methyltransferase SpoU YP_001232023.1 3871411 D 351605 CDS YP_001232024.1 148265318 5166332 3871931..3872308 1 NC_009483.1 hypothetical protein 3872308 5166332 Gura_3294 Geobacter uraniireducens Rf4 hypothetical protein YP_001232024.1 3871931 D 351605 CDS YP_001232025.1 148265319 5166333 complement(3872390..3873346) 1 NC_009483.1 PFAM: import inner membrane translocase, subunit Tim44; import inner membrane translocase subunit Tim44 3873346 5166333 Gura_3295 Geobacter uraniireducens Rf4 import inner membrane translocase subunit Tim44 YP_001232025.1 3872390 R 351605 CDS YP_001232026.1 148265320 5165097 complement(3873412..3873642) 1 NC_009483.1 hypothetical protein 3873642 5165097 Gura_3296 Geobacter uraniireducens Rf4 hypothetical protein YP_001232026.1 3873412 R 351605 CDS YP_001232027.1 148265321 5165098 complement(3874004..3874801) 1 NC_009483.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; metal-dependent phosphohydrolase 3874801 5165098 Gura_3297 Geobacter uraniireducens Rf4 metal-dependent phosphohydrolase YP_001232027.1 3874004 R 351605 CDS YP_001232028.1 148265322 5165099 complement(3874964..3875338) 1 NC_009483.1 PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ 3875338 5165099 Gura_3298 Geobacter uraniireducens Rf4 type IV pilus assembly PilZ YP_001232028.1 3874964 R 351605 CDS YP_001232029.1 148265323 5165598 complement(3875507..3876790) 1 NC_009483.1 fructose/tagatose bisphosphate aldolase-like protein 3876790 5165598 Gura_3299 Geobacter uraniireducens Rf4 fructose/tagatose bisphosphate aldolase-like protein YP_001232029.1 3875507 R 351605 CDS YP_001232030.1 148265324 5165599 complement(3876977..3879682) 1 NC_009483.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; P-type HAD superfamily ATPase 3879682 5165599 Gura_3300 Geobacter uraniireducens Rf4 P-type HAD superfamily ATPase YP_001232030.1 3876977 R 351605 CDS YP_001232031.1 148265325 5165600 3879831..3880892 1 NC_009483.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 3880892 5165600 Gura_3301 Geobacter uraniireducens Rf4 tRNA 2-selenouridine synthase YP_001232031.1 3879831 D 351605 CDS YP_001232032.1 148265326 5166856 complement(3880909..3881730) 1 NC_009483.1 hypothetical protein 3881730 5166856 Gura_3302 Geobacter uraniireducens Rf4 hypothetical protein YP_001232032.1 3880909 R 351605 CDS YP_001232033.1 148265327 5166857 complement(3881771..3882688) 1 NC_009483.1 hypothetical protein 3882688 5166857 Gura_3303 Geobacter uraniireducens Rf4 hypothetical protein YP_001232033.1 3881771 R 351605 CDS YP_001232034.1 148265328 5166858 complement(3883260..3884141) 1 NC_009483.1 hypothetical protein 3884141 5166858 Gura_3304 Geobacter uraniireducens Rf4 hypothetical protein YP_001232034.1 3883260 R 351605 CDS YP_001232035.1 148265329 5166787 complement(3884285..3886099) 1 NC_009483.1 hypothetical protein 3886099 5166787 Gura_3305 Geobacter uraniireducens Rf4 hypothetical protein YP_001232035.1 3884285 R 351605 CDS YP_001232036.1 148265330 5166788 complement(3886486..3886926) 1 NC_009483.1 hypothetical protein 3886926 5166788 Gura_3306 Geobacter uraniireducens Rf4 hypothetical protein YP_001232036.1 3886486 R 351605 CDS YP_001232037.1 148265331 5166789 complement(3886965..3887831) 1 NC_009483.1 PFAM: NUDIX hydrolase; NUDIX hydrolase 3887831 5166789 Gura_3307 Geobacter uraniireducens Rf4 NUDIX hydrolase YP_001232037.1 3886965 R 351605 CDS YP_001232038.1 148265332 5162754 complement(3888102..3889913) 1 NC_009483.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; Cache, type 2 domain protein; diguanylate cyclase 3889913 5162754 Gura_3308 Geobacter uraniireducens Rf4 diguanylate cyclase YP_001232038.1 3888102 R 351605 CDS YP_001232039.1 148265333 5162755 3890110..3890469 1 NC_009483.1 PFAM: regulatory protein, ArsR; regulatory protein ArsR 3890469 5162755 Gura_3309 Geobacter uraniireducens Rf4 regulatory protein ArsR YP_001232039.1 3890110 D 351605 CDS YP_001232040.1 148265334 5162756 3890559..3891137 1 NC_009483.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 3891137 5162756 Gura_3310 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001232040.1 3890559 D 351605 CDS YP_001232041.1 148265335 5163709 complement(3891550..3893193) 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3893193 5163709 Gura_3311 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001232041.1 3891550 R 351605 CDS YP_001232042.1 148265336 5163710 complement(3893379..3894341) 1 NC_009483.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 3894341 5163710 Gura_3312 Geobacter uraniireducens Rf4 alcohol dehydrogenase YP_001232042.1 3893379 R 351605 CDS YP_001232043.1 148265337 5163711 complement(3894379..3895533) 1 NC_009483.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein 3895533 5163711 Gura_3313 Geobacter uraniireducens Rf4 acyl-CoA dehydrogenase domain-containing protein YP_001232043.1 3894379 R 351605 CDS YP_001232044.1 148265338 5166769 3895824..3897314 1 NC_009483.1 PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase 3897314 5166769 Gura_3314 Geobacter uraniireducens Rf4 aldehyde dehydrogenase YP_001232044.1 3895824 D 351605 CDS YP_001232045.1 148265339 5166770 complement(3897450..3898229) 1 NC_009483.1 PFAM: protein phosphatase 2C domain protein; protein phosphatase 2C domain-containing protein 3898229 5166770 Gura_3315 Geobacter uraniireducens Rf4 protein phosphatase 2C domain-containing protein YP_001232045.1 3897450 R 351605 CDS YP_001232046.1 148265340 5166771 3898610..3900688 1 NC_009483.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Ig family protein; peptidase S8/S53 subtilisin kexin sedolisin 3900688 5166771 Gura_3316 Geobacter uraniireducens Rf4 peptidase S8/S53 subtilisin kexin sedolisin YP_001232046.1 3898610 D 351605 CDS YP_001232047.1 148265341 5162766 3900977..3901510 1 NC_009483.1 hypothetical protein 3901510 5162766 Gura_3317 Geobacter uraniireducens Rf4 hypothetical protein YP_001232047.1 3900977 D 351605 CDS YP_001232048.1 148265342 5162767 3901507..3902532 1 NC_009483.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 3902532 5162767 Gura_3318 Geobacter uraniireducens Rf4 integrase catalytic subunit YP_001232048.1 3901507 D 351605 CDS YP_001232049.1 148265343 5162768 complement(3903160..3903552) 1 NC_009483.1 PFAM: FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein 3903552 5162768 Gura_3319 Geobacter uraniireducens Rf4 FxsA cytoplasmic membrane protein YP_001232049.1 3903160 R 351605 CDS YP_001232050.1 148265344 5163652 complement(3903567..3904109) 1 NC_009483.1 PFAM: carbonic anhydrase; carbonic anhydrase 3904109 5163652 Gura_3320 Geobacter uraniireducens Rf4 carbonic anhydrase YP_001232050.1 3903567 R 351605 CDS YP_001232051.1 148265345 5163653 complement(3904420..3905475) 1 NC_009483.1 TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; molybdate ABC transporter ATPase 3905475 5163653 Gura_3321 Geobacter uraniireducens Rf4 molybdate ABC transporter ATPase YP_001232051.1 3904420 R 351605 CDS YP_001232052.1 148265346 5163654 complement(3905477..3906160) 1 NC_009483.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; molybdate ABC transporter inner membrane protein 3906160 5163654 Gura_3322 Geobacter uraniireducens Rf4 molybdate ABC transporter inner membrane protein YP_001232052.1 3905477 R 351605 CDS YP_001232053.1 148265347 5163253 complement(3906414..3907163) 1 NC_009483.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; molybdenum ABC transporter periplasmic molybdate-binding protein 3907163 5163253 Gura_3323 Geobacter uraniireducens Rf4 molybdenum ABC transporter periplasmic molybdate-binding protein YP_001232053.1 3906414 R 351605 CDS YP_001232054.1 148265348 5163254 complement(3907462..3907887) 1 NC_009483.1 PFAM: TOBE domain protein; TOBE domain-containing protein 3907887 5163254 Gura_3324 Geobacter uraniireducens Rf4 TOBE domain-containing protein YP_001232054.1 3907462 R 351605 CDS YP_001232055.1 148265349 5163255 3908256..3908684 1 NC_009483.1 PFAM: peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 3908684 5163255 Gura_3325 Geobacter uraniireducens Rf4 FKBP-type peptidylprolyl isomerase YP_001232055.1 3908256 D 351605 CDS YP_001232056.1 148265350 5165673 complement(3908752..3909789) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3909789 5165673 Gura_3326 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001232056.1 3908752 R 351605 CDS YP_001232057.1 148265351 5165674 complement(3909798..3910481) 1 NC_009483.1 PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis protein, P47K 3910481 5165674 Gura_3327 Geobacter uraniireducens Rf4 cobalamin synthesis protein, P47K YP_001232057.1 3909798 R 351605 CDS YP_001232058.1 148265352 5165675 complement(3910478..3911695) 1 NC_009483.1 Fe3+ ABC transporter periplasmic component-like protein 3911695 5165675 Gura_3328 Geobacter uraniireducens Rf4 Fe3+ ABC transporter periplasmic component-like protein YP_001232058.1 3910478 R 351605 CDS YP_001232059.1 148265353 5162897 complement(3911884..3913173) 1 NC_009483.1 PFAM: phosphate-selective porin O and P; phosphate-selective porin O and P 3913173 5162897 Gura_3329 Geobacter uraniireducens Rf4 phosphate-selective porin O and P YP_001232059.1 3911884 R 351605 CDS YP_001232060.1 148265354 5162898 3913319..3915670 1 NC_009483.1 hypothetical protein 3915670 5162898 Gura_3330 Geobacter uraniireducens Rf4 hypothetical protein YP_001232060.1 3913319 D 351605 CDS YP_001232061.1 148265355 5162899 complement(3915743..3916453) 1 NC_009483.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; protein-L-isoaspartate O-methyltransferase 3916453 5162899 Gura_3331 Geobacter uraniireducens Rf4 protein-L-isoaspartate O-methyltransferase YP_001232061.1 3915743 R 351605 CDS YP_001232062.1 148265356 5166738 3916697..3917410 1 NC_009483.1 hypothetical protein 3917410 5166738 Gura_3332 Geobacter uraniireducens Rf4 hypothetical protein YP_001232062.1 3916697 D 351605 CDS YP_001232063.1 148265357 5166739 complement(3917397..3918410) 1 NC_009483.1 PFAM: regulatory protein, LuxR; GAF domain protein; putative GAF sensor protein 3918410 5166739 Gura_3333 Geobacter uraniireducens Rf4 putative GAF sensor protein YP_001232063.1 3917397 R 351605 CDS YP_001232064.1 148265358 5166740 3918757..3920544 1 NC_009483.1 hypothetical protein 3920544 5166740 Gura_3334 Geobacter uraniireducens Rf4 hypothetical protein YP_001232064.1 3918757 D 351605 CDS YP_001232065.1 148265359 5164277 complement(3921181..3922557) 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 3922557 5164277 Gura_3335 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001232065.1 3921181 R 351605 CDS YP_001232066.1 148265360 5164278 3923074..3924039 1 NC_009483.1 PFAM: Auxin Efflux Carrier; auxin efflux carrier 3924039 5164278 Gura_3336 Geobacter uraniireducens Rf4 auxin efflux carrier YP_001232066.1 3923074 D 351605 CDS YP_001232067.1 148265361 5164279 complement(3924097..3924594) 1 NC_009483.1 hypothetical protein 3924594 5164279 Gura_3337 Geobacter uraniireducens Rf4 hypothetical protein YP_001232067.1 3924097 R 351605 CDS YP_001232068.1 148265362 5164948 complement(3924695..3925096) 1 NC_009483.1 PFAM: DoxX family protein; DoxX family protein 3925096 5164948 Gura_3338 Geobacter uraniireducens Rf4 DoxX family protein YP_001232068.1 3924695 R 351605 CDS YP_001232069.1 148265363 5164949 complement(3925354..3925953) 1 NC_009483.1 hypothetical protein 3925953 5164949 Gura_3339 Geobacter uraniireducens Rf4 hypothetical protein YP_001232069.1 3925354 R 351605 CDS YP_001232070.1 148265364 5164950 complement(3925925..3926740) 1 NC_009483.1 PFAM: Cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 3926740 5164950 Gura_3340 Geobacter uraniireducens Rf4 cobyrinic acid a,c-diamide synthase YP_001232070.1 3925925 R 351605 CDS YP_001232071.1 148265365 5164789 complement(3926786..3927367) 1 NC_009483.1 hypothetical protein 3927367 5164789 Gura_3341 Geobacter uraniireducens Rf4 hypothetical protein YP_001232071.1 3926786 R 351605 CDS YP_001232072.1 148265366 5164790 complement(3927386..3927901) 1 NC_009483.1 hypothetical protein 3927901 5164790 Gura_3342 Geobacter uraniireducens Rf4 hypothetical protein YP_001232072.1 3927386 R 351605 CDS YP_001232073.1 148265367 5164791 complement(3927992..3928783) 1 NC_009483.1 PFAM: Roadblock/LC7 family protein; roadblock/LC7 family protein 3928783 5164791 Gura_3343 Geobacter uraniireducens Rf4 roadblock/LC7 family protein YP_001232073.1 3927992 R 351605 CDS YP_001232074.1 148265368 5164341 complement(3928832..3930226) 1 NC_009483.1 PFAM: domain of unknown function DUF1745; hypothetical protein 3930226 5164341 Gura_3344 Geobacter uraniireducens Rf4 hypothetical protein YP_001232074.1 3928832 R 351605 CDS YP_001232075.1 148265369 5164342 complement(3931121..3931459) 1 NC_009483.1 hypothetical protein 3931459 5164342 Gura_3345 Geobacter uraniireducens Rf4 hypothetical protein YP_001232075.1 3931121 R 351605 CDS YP_001232076.1 148265370 5164343 complement(3931720..3932049) 1 NC_009483.1 hypothetical protein 3932049 5164343 Gura_3346 Geobacter uraniireducens Rf4 hypothetical protein YP_001232076.1 3931720 R 351605 CDS YP_001232077.1 148265371 5163147 complement(3932077..3932886) 1 NC_009483.1 PFAM: protein of unknown function DUF547; hypothetical protein 3932886 5163147 Gura_3347 Geobacter uraniireducens Rf4 hypothetical protein YP_001232077.1 3932077 R 351605 CDS YP_001232078.1 148265372 5163148 complement(3932920..3933621) 1 NC_009483.1 hypothetical protein 3933621 5163148 Gura_3348 Geobacter uraniireducens Rf4 hypothetical protein YP_001232078.1 3932920 R 351605 CDS YP_001232079.1 148265373 5163149 complement(3933687..3934163) 1 NC_009483.1 hypothetical protein 3934163 5163149 Gura_3349 Geobacter uraniireducens Rf4 hypothetical protein YP_001232079.1 3933687 R 351605 CDS YP_001232080.1 148265374 5166835 complement(3934236..3934709) 1 NC_009483.1 hypothetical protein 3934709 5166835 Gura_3350 Geobacter uraniireducens Rf4 hypothetical protein YP_001232080.1 3934236 R 351605 CDS YP_001232081.1 148265375 5166836 complement(3935033..3935869) 1 NC_009483.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; stage II sporulation E family protein 3935869 5166836 Gura_3351 Geobacter uraniireducens Rf4 stage II sporulation E family protein YP_001232081.1 3935033 R 351605 CDS YP_001232082.1 148265376 5166837 complement(3935926..3936456) 1 NC_009483.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; peroxidase-like protein 3936456 5166837 Gura_3352 Geobacter uraniireducens Rf4 peroxidase-like protein YP_001232082.1 3935926 R 351605 CDS YP_001232083.1 148265377 5165576 complement(3936502..3937089) 1 NC_009483.1 PFAM: regulatory protein, TetR; TetR family transcriptional regulator 3937089 5165576 Gura_3353 Geobacter uraniireducens Rf4 TetR family transcriptional regulator YP_001232083.1 3936502 R 351605 CDS YP_001232084.1 148265378 5165577 complement(3937517..3938707) 1 NC_009483.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 3938707 5165577 Gura_3354 Geobacter uraniireducens Rf4 aspartate aminotransferase YP_001232084.1 3937517 R 351605 CDS YP_001232085.1 148265379 5165578 complement(3938721..3939542) 1 NC_009483.1 PFAM: inositol monophosphatase; inositol-phosphate phosphatase 3939542 5165578 Gura_3355 Geobacter uraniireducens Rf4 inositol-phosphate phosphatase YP_001232085.1 3938721 R 351605 CDS YP_001232086.1 148265380 5162784 complement(3939777..3940205) 1 NC_009483.1 hypothetical protein 3940205 5162784 Gura_3356 Geobacter uraniireducens Rf4 hypothetical protein YP_001232086.1 3939777 R 351605 CDS YP_001232087.1 148265381 5162785 complement(3940202..3940780) 1 NC_009483.1 hypothetical protein 3940780 5162785 Gura_3357 Geobacter uraniireducens Rf4 hypothetical protein YP_001232087.1 3940202 R 351605 CDS YP_001232088.1 148265382 5162786 complement(3940777..3941169) 1 NC_009483.1 hypothetical protein 3941169 5162786 Gura_3358 Geobacter uraniireducens Rf4 hypothetical protein YP_001232088.1 3940777 R 351605 CDS YP_001232089.1 148265383 5165543 complement(3941549..3942151) 1 NC_009483.1 hypothetical protein 3942151 5165543 Gura_3359 Geobacter uraniireducens Rf4 hypothetical protein YP_001232089.1 3941549 R 351605 CDS YP_001232090.1 148265384 5165544 complement(3942259..3945357) 1 NC_009483.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux protein 3945357 5165544 Gura_3360 Geobacter uraniireducens Rf4 CzcA family heavy metal efflux protein YP_001232090.1 3942259 R 351605 CDS YP_001232091.1 148265385 5165545 complement(3945517..3946749) 1 NC_009483.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 3946749 5165545 Gura_3361 Geobacter uraniireducens Rf4 RND family efflux transporter MFP subunit YP_001232091.1 3945517 R 351605 CDS YP_001232092.1 148265386 5163649 complement(3946746..3948041) 1 NC_009483.1 PFAM: outer membrane efflux protein; outer membrane efflux protein 3948041 5163649 Gura_3362 Geobacter uraniireducens Rf4 outer membrane efflux protein YP_001232092.1 3946746 R 351605 CDS YP_001232093.1 148265387 5163650 complement(3948341..3948706) 1 NC_009483.1 hypothetical protein 3948706 5163650 Gura_3363 Geobacter uraniireducens Rf4 hypothetical protein YP_001232093.1 3948341 R 351605 CDS YP_001232094.1 148265388 5163651 complement(3948830..3949579) 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; histidine kinase 3949579 5163651 Gura_3364 Geobacter uraniireducens Rf4 histidine kinase YP_001232094.1 3948830 R 351605 CDS YP_001232095.1 148265389 5163602 complement(3949819..3951276) 1 NC_009483.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; ammonium transporter 3951276 5163602 Gura_3365 Geobacter uraniireducens Rf4 ammonium transporter YP_001232095.1 3949819 R 351605 CDS YP_001232096.1 148265390 5163603 complement(3951310..3951648) 1 NC_009483.1 PFAM: nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 3951648 5163603 Gura_3366 Geobacter uraniireducens Rf4 nitrogen regulatory protein P-II YP_001232096.1 3951310 R 351605 CDS YP_001232097.1 148265391 5163604 complement(3951742..3952560) 1 NC_009483.1 hypothetical protein 3952560 5163604 Gura_3367 Geobacter uraniireducens Rf4 hypothetical protein YP_001232097.1 3951742 R 351605 CDS YP_001232098.1 148265392 5166358 complement(3953170..3954321) 1 NC_009483.1 in Methanococcus jannaschii this protein catalyzes the condensation of alpha-ketoglutarate and acetyl-CoA to form trans-homoaconitate; functions in alphaketosuberate synthesis which is a precursor in coenzyme B and biotin synthesis; trans-homoaconitate synthase 3954321 aksA 5166358 aksA Geobacter uraniireducens Rf4 trans-homoaconitate synthase YP_001232098.1 3953170 R 351605 CDS YP_001232099.1 148265393 5166359 3954647..3955807 1 NC_009483.1 PFAM: Na+/H+ antiporter NhaA; Na+/H+ antiporter NhaA 3955807 5166359 Gura_3369 Geobacter uraniireducens Rf4 Na+/H+ antiporter NhaA YP_001232099.1 3954647 D 351605 CDS YP_001232100.1 148265394 5166360 complement(3955802..3957265) 1 NC_009483.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase, subunit FdhD; formate dehydrogenase family accessory protein FdhD 3957265 5166360 Gura_3370 Geobacter uraniireducens Rf4 formate dehydrogenase family accessory protein FdhD YP_001232100.1 3955802 R 351605 CDS YP_001232101.1 148265395 5162982 complement(3957497..3958342) 1 NC_009483.1 hypothetical protein 3958342 5162982 Gura_3371 Geobacter uraniireducens Rf4 hypothetical protein YP_001232101.1 3957497 R 351605 CDS YP_001232102.1 148265396 5162983 complement(3958342..3958974) 1 NC_009483.1 TIGRFAM: formate dehydrogenase, gamma subunit; formate dehydrogenase subunit gamma 3958974 5162983 Gura_3372 Geobacter uraniireducens Rf4 formate dehydrogenase subunit gamma YP_001232102.1 3958342 R 351605 CDS YP_001232103.1 148265397 5162984 complement(3958967..3959743) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 3959743 5162984 Gura_3373 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001232103.1 3958967 R 351605 CDS YP_001232104.1 148265398 5165386 complement(3959750..3962935) 1 NC_009483.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; Contains selenocysteine; formate dehydrogenase subunit alpha 3962935 5165386 Gura_3374 Geobacter uraniireducens Rf4 formate dehydrogenase subunit alpha YP_001232104.1 3959750 R 351605 CDS YP_001232105.1 148265399 5165387 3963375..3964760 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 3964760 5165387 Gura_3375 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001232105.1 3963375 D 351605 CDS YP_001232106.1 148265400 5165388 3964773..3966848 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 3966848 5165388 Gura_3376 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001232106.1 3964773 D 351605 CDS YP_001232107.1 148265401 5163732 complement(3966918..3969245) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 3969245 5163732 Gura_3377 Geobacter uraniireducens Rf4 PAS/PAC sensor signal transduction histidine kinase YP_001232107.1 3966918 R 351605 CDS YP_001232108.1 148265402 5163733 complement(3969507..3969836) 1 NC_009483.1 PFAM: PemK family protein; transcriptional modulator of MazE/toxin MazF 3969836 5163733 Gura_3378 Geobacter uraniireducens Rf4 transcriptional modulator of MazE/toxin MazF YP_001232108.1 3969507 R 351605 CDS YP_001232109.1 148265403 5163734 complement(3969824..3970078) 1 NC_009483.1 PFAM: SpoVT/AbrB domain protein; transcriptional regulator/antitoxin MazE 3970078 5163734 Gura_3379 Geobacter uraniireducens Rf4 transcriptional regulator/antitoxin MazE YP_001232109.1 3969824 R 351605 CDS YP_001232110.1 148265404 5163321 complement(3970901..3971683) 1 NC_009483.1 hypothetical protein 3971683 5163321 Gura_3381 Geobacter uraniireducens Rf4 hypothetical protein YP_001232110.1 3970901 R 351605 CDS YP_001232111.1 148265405 5163322 complement(3971680..3972966) 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 3972966 5163322 Gura_3382 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001232111.1 3971680 R 351605 CDS YP_001232112.1 148265406 5165309 complement(3973085..3973663) 1 NC_009483.1 PFAM: protein of unknown function DUF820; hypothetical protein 3973663 5165309 Gura_3383 Geobacter uraniireducens Rf4 hypothetical protein YP_001232112.1 3973085 R 351605 CDS YP_001232113.1 148265407 5165310 complement(3973806..3973976) 1 NC_009483.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 3973976 tatA 5165310 tatA Geobacter uraniireducens Rf4 twin arginine translocase protein A YP_001232113.1 3973806 R 351605 CDS YP_001232114.1 148265408 5165311 complement(3974411..3975862) 1 NC_009483.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase, subunit FdhD; formate dehydrogenase family accessory protein FdhD 3975862 5165311 Gura_3385 Geobacter uraniireducens Rf4 formate dehydrogenase family accessory protein FdhD YP_001232114.1 3974411 R 351605 CDS YP_001232115.1 148265409 5166781 complement(3976046..3977257) 1 NC_009483.1 PFAM: Polysulphide reductase, NrfD; polysulfide reductase NrfD 3977257 5166781 Gura_3386 Geobacter uraniireducens Rf4 polysulfide reductase NrfD YP_001232115.1 3976046 R 351605 CDS YP_001232116.1 148265410 5166782 complement(3977254..3978099) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 3978099 5166782 Gura_3387 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001232116.1 3977254 R 351605 CDS YP_001232117.1 148265411 5166783 complement(3978096..3981128) 1 NC_009483.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; Contains selenocysteine; formate dehydrogenase subunit alpha 3981128 5166783 Gura_3388 Geobacter uraniireducens Rf4 formate dehydrogenase subunit alpha YP_001232117.1 3978096 R 351605 CDS YP_001232118.1 148265412 5164320 3981541..3982929 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 3982929 5164320 Gura_3389 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001232118.1 3981541 D 351605 CDS YP_001232119.1 148265413 5164321 3982929..3984944 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 3984944 5164321 Gura_3390 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001232119.1 3982929 D 351605 CDS YP_001232120.1 148265414 5164322 3985074..3986441 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 3986441 5164322 Gura_3391 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001232120.1 3985074 D 351605 CDS YP_001232121.1 148265415 5165643 3986446..3988434 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 3988434 5165643 Gura_3392 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001232121.1 3986446 D 351605 CDS YP_001232122.1 148265416 5165644 3988635..3989849 1 NC_009483.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; molybdenum cofactor synthesis domain-containing protein 3989849 5165644 Gura_3393 Geobacter uraniireducens Rf4 molybdenum cofactor synthesis domain-containing protein YP_001232122.1 3988635 D 351605 CDS YP_001232123.1 148265417 5165645 3990334..3992328 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; methyl-accepting chemotaxis sensory transducer 3992328 5165645 Gura_3394 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001232123.1 3990334 D 351605 CDS YP_001232124.1 148265418 5164732 3992460..3993461 1 NC_009483.1 TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; phosphate acetyltransferase 3993461 5164732 Gura_3395 Geobacter uraniireducens Rf4 phosphate acetyltransferase YP_001232124.1 3992460 D 351605 CDS YP_001232125.1 148265419 5164733 complement(3993620..3994885) 1 NC_009483.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 3994885 5164733 Gura_3396 Geobacter uraniireducens Rf4 acetate kinase YP_001232125.1 3993620 R 351605 CDS YP_001232126.1 148265420 5164734 complement(3995708..3997390) 1 NC_009483.1 TIGRFAM: MJ0042 family finger-like protein; Zinc finger-domain-containing protein 3997390 5164734 Gura_3397 Geobacter uraniireducens Rf4 Zinc finger-domain-containing protein YP_001232126.1 3995708 R 351605 CDS YP_001232127.1 148265421 5164465 complement(3997410..3997922) 1 NC_009483.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 3997922 5164465 Gura_3398 Geobacter uraniireducens Rf4 hypoxanthine phosphoribosyltransferase YP_001232127.1 3997410 R 351605 CDS YP_001232128.1 148265422 5164466 3998083..3998772 1 NC_009483.1 PFAM: protein of unknown function DUF1573; hypothetical protein 3998772 5164466 Gura_3399 Geobacter uraniireducens Rf4 hypothetical protein YP_001232128.1 3998083 D 351605 CDS YP_001232129.1 148265423 5164467 complement(3998803..3999681) 1 NC_009483.1 PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 3999681 5164467 Gura_3400 Geobacter uraniireducens Rf4 beta-lactamase domain-containing protein YP_001232129.1 3998803 R 351605 CDS YP_001232130.1 148265424 5165149 4000046..4000456 1 NC_009483.1 hypothetical protein 4000456 5165149 Gura_3401 Geobacter uraniireducens Rf4 hypothetical protein YP_001232130.1 4000046 D 351605 CDS YP_001232131.1 148265425 5166137 complement(4000834..4001655) 1 NC_009483.1 PFAM: BRO domain protein; prophage antirepressor 4001655 5166137 Gura_3402 Geobacter uraniireducens Rf4 prophage antirepressor YP_001232131.1 4000834 R 351605 CDS YP_001232132.1 148265426 5166138 complement(4001734..4002705) 1 NC_009483.1 transcriptional regulator-like protein 4002705 5166138 Gura_3403 Geobacter uraniireducens Rf4 transcriptional regulator-like protein YP_001232132.1 4001734 R 351605 CDS YP_001232133.1 148265427 5166139 complement(4003338..4004018) 1 NC_009483.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 4004018 5166139 Gura_3404 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001232133.1 4003338 R 351605 CDS YP_001232134.1 148265428 5165013 complement(4004015..4004629) 1 NC_009483.1 PFAM: Methyltransferase type 11; type 11 methyltransferase 4004629 5165013 Gura_3405 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001232134.1 4004015 R 351605 CDS YP_001232135.1 148265429 5165014 complement(4004616..4005338) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4005338 5165014 Gura_3406 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001232135.1 4004616 R 351605 CDS YP_001232136.1 148265430 5165015 complement(4005341..4006543) 1 NC_009483.1 PFAM: protein of unknown function DUF214; hypothetical protein 4006543 5165015 Gura_3407 Geobacter uraniireducens Rf4 hypothetical protein YP_001232136.1 4005341 R 351605 CDS YP_001232137.1 148265431 5166878 complement(4006540..4007709) 1 NC_009483.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 4007709 5166878 Gura_3408 Geobacter uraniireducens Rf4 RND family efflux transporter MFP subunit YP_001232137.1 4006540 R 351605 CDS YP_001232138.1 148265432 5166879 complement(4007734..4008993) 1 NC_009483.1 PFAM: outer membrane efflux protein; outer membrane efflux protein 4008993 5166879 Gura_3409 Geobacter uraniireducens Rf4 outer membrane efflux protein YP_001232138.1 4007734 R 351605 CDS YP_001232139.1 148265433 5166880 complement(4009062..4009652) 1 NC_009483.1 PFAM: regulatory protein, TetR; TetR family transcriptional regulator 4009652 5166880 Gura_3410 Geobacter uraniireducens Rf4 TetR family transcriptional regulator YP_001232139.1 4009062 R 351605 CDS YP_001232140.1 148265434 5166687 4009925..4010242 1 NC_009483.1 hypothetical protein 4010242 5166687 Gura_3411 Geobacter uraniireducens Rf4 hypothetical protein YP_001232140.1 4009925 D 351605 CDS YP_001232141.1 148265435 5166688 4010378..4010932 1 NC_009483.1 PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; OB-fold tRNA/helicase-type nucleic acid binding protein 4010932 5166688 Gura_3412 Geobacter uraniireducens Rf4 OB-fold tRNA/helicase-type nucleic acid binding protein YP_001232141.1 4010378 D 351605 CDS YP_001232142.1 148265436 5166689 4010989..4011846 1 NC_009483.1 hypothetical protein 4011846 5166689 Gura_3413 Geobacter uraniireducens Rf4 hypothetical protein YP_001232142.1 4010989 D 351605 CDS YP_001232143.1 148265437 5165745 4011855..4013075 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 4013075 5165745 Gura_3414 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001232143.1 4011855 D 351605 CDS YP_001232144.1 148265438 5165746 4013095..4014456 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 4014456 5165746 Gura_3415 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001232144.1 4013095 D 351605 CDS YP_001232145.1 148265439 5165747 4014766..4015416 1 NC_009483.1 Co/Zn/Cd cation transporter-like protein 4015416 5165747 Gura_3416 Geobacter uraniireducens Rf4 Co/Zn/Cd cation transporter-like protein YP_001232145.1 4014766 D 351605 CDS YP_001232146.1 148265440 5167048 complement(4015777..4018596) 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 4018596 5167048 Gura_3417 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001232146.1 4015777 R 351605 CDS YP_001232147.1 148265441 5167049 complement(4018593..4018997) 1 NC_009483.1 hypothetical protein 4018997 5167049 Gura_3418 Geobacter uraniireducens Rf4 hypothetical protein YP_001232147.1 4018593 R 351605 CDS YP_001232148.1 148265442 5167050 complement(4019538..4020605) 1 NC_009483.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA family protein; magnesium and cobalt transport protein CorA 4020605 5167050 Gura_3419 Geobacter uraniireducens Rf4 magnesium and cobalt transport protein CorA YP_001232148.1 4019538 R 351605 CDS YP_001232149.1 148265443 5166730 complement(4020628..4020927) 1 NC_009483.1 PFAM: plasmid stabilization system; plasmid stabilization system protein 4020927 5166730 Gura_3420 Geobacter uraniireducens Rf4 plasmid stabilization system protein YP_001232149.1 4020628 R 351605 CDS YP_001232150.1 148265444 5166731 complement(4020932..4021207) 1 NC_009483.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein 4021207 5166731 Gura_3421 Geobacter uraniireducens Rf4 prevent-host-death family protein YP_001232150.1 4020932 R 351605 CDS YP_001232151.1 148265445 5166732 complement(4021295..4022971) 1 NC_009483.1 hypothetical protein 4022971 5166732 Gura_3422 Geobacter uraniireducens Rf4 hypothetical protein YP_001232151.1 4021295 R 351605 CDS YP_001232152.1 148265446 5166587 complement(4023059..4023349) 1 NC_009483.1 hypothetical protein 4023349 5166587 Gura_3423 Geobacter uraniireducens Rf4 hypothetical protein YP_001232152.1 4023059 R 351605 CDS YP_001232153.1 148265447 5166588 complement(4023535..4023939) 1 NC_009483.1 PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; conserved hypothetical protein 156; hypothetical protein 4023939 5166588 Gura_3424 Geobacter uraniireducens Rf4 hypothetical protein YP_001232153.1 4023535 R 351605 CDS YP_001232154.1 148265448 5166589 complement(4024098..4025156) 1 NC_009483.1 PFAM: glycosyl hydrolase, BNR repeat-containing protein; BNR repeat-containing glycosyl hydrolase 4025156 5166589 Gura_3425 Geobacter uraniireducens Rf4 BNR repeat-containing glycosyl hydrolase YP_001232154.1 4024098 R 351605 CDS YP_001232155.1 148265449 5165769 complement(4025203..4027908) 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 4027908 5165769 Gura_3426 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001232155.1 4025203 R 351605 CDS YP_001232156.1 148265450 5165770 complement(4027986..4032359) 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 4032359 5165770 Gura_3427 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001232156.1 4027986 R 351605 CDS YP_001232157.1 148265451 5165771 complement(4032447..4035500) 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 4035500 5165771 Gura_3428 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001232157.1 4032447 R 351605 CDS YP_001232158.1 148265452 5167063 complement(4035715..4036908) 1 NC_009483.1 hypothetical protein 4036908 5167063 Gura_3429 Geobacter uraniireducens Rf4 hypothetical protein YP_001232158.1 4035715 R 351605 CDS YP_001232159.1 148265453 5167064 complement(4037102..4039843) 1 NC_009483.1 hypothetical protein 4039843 5167064 Gura_3430 Geobacter uraniireducens Rf4 hypothetical protein YP_001232159.1 4037102 R 351605 CDS YP_001232160.1 148265454 5167065 4040348..4041022 1 NC_009483.1 PFAM: surface antigen msp4 family protein; surface antigen msp4 family protein 4041022 5167065 Gura_3431 Geobacter uraniireducens Rf4 surface antigen msp4 family protein YP_001232160.1 4040348 D 351605 CDS YP_001232161.1 148265455 5162619 4041716..4042033 1 NC_009483.1 hypothetical protein 4042033 5162619 Gura_3432 Geobacter uraniireducens Rf4 hypothetical protein YP_001232161.1 4041716 D 351605 CDS YP_001232162.1 148265456 5162620 complement(4042272..4042955) 1 NC_009483.1 hypothetical protein 4042955 5162620 Gura_3433 Geobacter uraniireducens Rf4 hypothetical protein YP_001232162.1 4042272 R 351605 CDS YP_001232163.1 148265457 5162621 complement(4043269..4043625) 1 NC_009483.1 hypothetical protein 4043625 5162621 Gura_3434 Geobacter uraniireducens Rf4 hypothetical protein YP_001232163.1 4043269 R 351605 CDS YP_001232164.1 148265458 5162948 4044166..4044516 1 NC_009483.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 4044516 5162948 Gura_3435 Geobacter uraniireducens Rf4 XRE family transcriptional regulator YP_001232164.1 4044166 D 351605 CDS YP_001232165.1 148265459 5163241 4045124..4045582 1 NC_009483.1 PFAM: protein of unknown function DUF107; hypothetical protein 4045582 5163241 Gura_3436 Geobacter uraniireducens Rf4 hypothetical protein YP_001232165.1 4045124 D 351605 CDS YP_001232166.1 148265460 5163242 4045582..4046433 1 NC_009483.1 PFAM: band 7 protein; hypothetical protein 4046433 5163242 Gura_3437 Geobacter uraniireducens Rf4 hypothetical protein YP_001232166.1 4045582 D 351605 CDS YP_001232167.1 148265461 5163243 complement(4046898..4047383) 1 NC_009483.1 hypothetical protein 4047383 5163243 Gura_3438 Geobacter uraniireducens Rf4 hypothetical protein YP_001232167.1 4046898 R 351605 CDS YP_001232168.1 148265462 5163197 4047938..4048546 1 NC_009483.1 hypothetical protein 4048546 5163197 Gura_3439 Geobacter uraniireducens Rf4 hypothetical protein YP_001232168.1 4047938 D 351605 CDS YP_001232169.1 148265463 5163198 complement(4048821..4049252) 1 NC_009483.1 PFAM: peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 4049252 5163198 Gura_3440 Geobacter uraniireducens Rf4 FKBP-type peptidylprolyl isomerase YP_001232169.1 4048821 R 351605 CDS YP_001232170.1 148265464 5163199 complement(4049469..4050512) 1 NC_009483.1 beta-lactamase class A-like protein 4050512 5163199 Gura_3441 Geobacter uraniireducens Rf4 beta-lactamase class A-like protein YP_001232170.1 4049469 R 351605 CDS YP_001232171.1 148265465 5162837 complement(4051298..4051744) 1 NC_009483.1 hypothetical protein 4051744 5162837 Gura_3442 Geobacter uraniireducens Rf4 hypothetical protein YP_001232171.1 4051298 R 351605 CDS YP_001232172.1 148265466 5162838 complement(4051769..4052143) 1 NC_009483.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4052143 5162838 Gura_3443 Geobacter uraniireducens Rf4 glyoxalase/bleomycin resistance protein/dioxygenase YP_001232172.1 4051769 R 351605 CDS YP_001232173.1 148265467 5162839 complement(4052238..4053179) 1 NC_009483.1 hypothetical protein 4053179 5162839 Gura_3444 Geobacter uraniireducens Rf4 hypothetical protein YP_001232173.1 4052238 R 351605 CDS YP_001232174.1 148265468 5163313 4053427..4054086 1 NC_009483.1 PFAM: protein of unknown function DUF480; hypothetical protein 4054086 5163313 Gura_3445 Geobacter uraniireducens Rf4 hypothetical protein YP_001232174.1 4053427 D 351605 CDS YP_001232175.1 148265469 5163314 4054228..4054698 1 NC_009483.1 PFAM: protein of unknown function DUF55; hypothetical protein 4054698 5163314 Gura_3446 Geobacter uraniireducens Rf4 hypothetical protein YP_001232175.1 4054228 D 351605 CDS YP_001232176.1 148265470 5163315 complement(4054767..4055237) 1 NC_009483.1 PFAM: protein of unknown function DUF1456; hypothetical protein 4055237 5163315 Gura_3447 Geobacter uraniireducens Rf4 hypothetical protein YP_001232176.1 4054767 R 351605 CDS YP_001232177.1 148265471 5163093 complement(4055464..4056093) 1 NC_009483.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase 4056093 5163093 Gura_3448 Geobacter uraniireducens Rf4 HAD family hydrolase YP_001232177.1 4055464 R 351605 CDS YP_001232178.1 148265472 5163094 complement(4056363..4057271) 1 NC_009483.1 PFAM: Pirin domain protein; Pirin domain protein; pirin domain-containing protein 4057271 5163094 Gura_3449 Geobacter uraniireducens Rf4 pirin domain-containing protein YP_001232178.1 4056363 R 351605 CDS YP_001232179.1 148265473 5163095 complement(4057461..4058282) 1 NC_009483.1 PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 4058282 5163095 Gura_3450 Geobacter uraniireducens Rf4 alpha/beta hydrolase fold protein YP_001232179.1 4057461 R 351605 CDS YP_001232180.1 148265474 5162915 complement(4058340..4059089) 1 NC_009483.1 PFAM: protein of unknown function DUF72; hypothetical protein 4059089 5162915 Gura_3451 Geobacter uraniireducens Rf4 hypothetical protein YP_001232180.1 4058340 R 351605 CDS YP_001232181.1 148265475 5162916 complement(4059086..4060690) 1 NC_009483.1 PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; ATP dependent DNA ligase 4060690 5162916 Gura_3452 Geobacter uraniireducens Rf4 ATP dependent DNA ligase YP_001232181.1 4059086 R 351605 CDS YP_001232182.1 148265476 5162917 complement(4060818..4061723) 1 NC_009483.1 PFAM: DNA primase, small subunit; DNA primase, small subunit 4061723 5162917 Gura_3453 Geobacter uraniireducens Rf4 DNA primase, small subunit YP_001232182.1 4060818 R 351605 CDS YP_001232183.1 148265477 5163323 complement(4061720..4062505) 1 NC_009483.1 PFAM: Ku domain protein; Ku domain-containing protein 4062505 5163323 Gura_3454 Geobacter uraniireducens Rf4 Ku domain-containing protein YP_001232183.1 4061720 R 351605 CDS YP_001232184.1 148265478 5163324 complement(4062527..4063297) 1 NC_009483.1 PFAM: Ku domain protein; Ku domain-containing protein 4063297 5163324 Gura_3455 Geobacter uraniireducens Rf4 Ku domain-containing protein YP_001232184.1 4062527 R 351605 CDS YP_001232185.1 148265479 5163325 complement(4063384..4063542) 1 NC_009483.1 hypothetical protein 4063542 5163325 Gura_3456 Geobacter uraniireducens Rf4 hypothetical protein YP_001232185.1 4063384 R 351605 CDS YP_001232186.1 148265480 5163206 complement(4063568..4063888) 1 NC_009483.1 hypothetical protein 4063888 5163206 Gura_3457 Geobacter uraniireducens Rf4 hypothetical protein YP_001232186.1 4063568 R 351605 CDS YP_001232187.1 148265481 5163207 complement(4063897..4065138) 1 NC_009483.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter 4065138 5163207 Gura_3458 Geobacter uraniireducens Rf4 cation diffusion facilitator family transporter YP_001232187.1 4063897 R 351605 CDS YP_001232188.1 148265482 5163208 complement(4065206..4066717) 1 NC_009483.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; Methyltransferase type 11; Methyltransferase type 12; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 4066717 5163208 Gura_3459 Geobacter uraniireducens Rf4 PAS/PAC sensor-containing diguanylate cyclase YP_001232188.1 4065206 R 351605 CDS YP_001232189.1 148265483 5163691 complement(4066882..4067622) 1 NC_009483.1 PFAM: zinc/iron permease; zinc/iron permease 4067622 5163691 Gura_3460 Geobacter uraniireducens Rf4 zinc/iron permease YP_001232189.1 4066882 R 351605 CDS YP_001232190.1 148265484 5163692 complement(4067768..4068223) 1 NC_009483.1 hypothetical protein 4068223 5163692 Gura_3461 Geobacter uraniireducens Rf4 hypothetical protein YP_001232190.1 4067768 R 351605 CDS YP_001232191.1 148265485 5163693 complement(4068269..4069210) 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 4069210 5163693 Gura_3462 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001232191.1 4068269 R 351605 CDS YP_001232192.1 148265486 5163064 complement(4069227..4070108) 1 NC_009483.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter 4070108 5163064 Gura_3463 Geobacter uraniireducens Rf4 cation diffusion facilitator family transporter YP_001232192.1 4069227 R 351605 CDS YP_001232193.1 148265487 5163065 4071007..4071480 1 NC_009483.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; glyoxalase/bleomycin resistance protein/dioxygenase 4071480 5163065 Gura_3464 Geobacter uraniireducens Rf4 glyoxalase/bleomycin resistance protein/dioxygenase YP_001232193.1 4071007 D 351605 CDS YP_001232194.1 148265488 5163066 complement(4071584..4071976) 1 NC_009483.1 hypothetical protein 4071976 5163066 Gura_3465 Geobacter uraniireducens Rf4 hypothetical protein YP_001232194.1 4071584 R 351605 CDS YP_001232195.1 148265489 5163820 4072541..4075714 1 NC_009483.1 PFAM: acriflavin resistance protein; acriflavin resistance protein 4075714 5163820 Gura_3466 Geobacter uraniireducens Rf4 acriflavin resistance protein YP_001232195.1 4072541 D 351605 CDS YP_001232196.1 148265490 5163821 4075748..4076197 1 NC_009483.1 hypothetical protein 4076197 5163821 Gura_3467 Geobacter uraniireducens Rf4 hypothetical protein YP_001232196.1 4075748 D 351605 CDS YP_001232197.1 148265491 5163822 4076267..4079419 1 NC_009483.1 PFAM: acriflavin resistance protein; acriflavin resistance protein 4079419 5163822 Gura_3468 Geobacter uraniireducens Rf4 acriflavin resistance protein YP_001232197.1 4076267 D 351605 CDS YP_001232198.1 148265492 5164017 4079445..4080380 1 NC_009483.1 hypothetical protein 4080380 5164017 Gura_3469 Geobacter uraniireducens Rf4 hypothetical protein YP_001232198.1 4079445 D 351605 CDS YP_001232199.1 148265493 5164018 4080427..4081173 1 NC_009483.1 hypothetical protein 4081173 5164018 Gura_3470 Geobacter uraniireducens Rf4 hypothetical protein YP_001232199.1 4080427 D 351605 CDS YP_001232200.1 148265494 5164019 4081202..4081531 1 NC_009483.1 PFAM: Propeptide, PepSY amd peptidase M4; peptidase 4081531 5164019 Gura_3471 Geobacter uraniireducens Rf4 peptidase YP_001232200.1 4081202 D 351605 CDS YP_001232201.1 148265495 5163892 4081692..4082567 1 NC_009483.1 hypothetical protein 4082567 5163892 Gura_3472 Geobacter uraniireducens Rf4 hypothetical protein YP_001232201.1 4081692 D 351605 CDS YP_001232202.1 148265496 5163893 4082664..4084406 1 NC_009483.1 PFAM: Peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein 4084406 5163893 Gura_3473 Geobacter uraniireducens Rf4 peptidoglycan binding domain-containing protein YP_001232202.1 4082664 D 351605 CDS YP_001232203.1 148265497 5163894 4084403..4086370 1 NC_009483.1 PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; ABC transporter-like protein 4086370 5163894 Gura_3474 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001232203.1 4084403 D 351605 CDS YP_001232204.1 148265498 5163901 complement(4086383..4087933) 1 NC_009483.1 hypothetical protein 4087933 5163901 Gura_3475 Geobacter uraniireducens Rf4 hypothetical protein YP_001232204.1 4086383 R 351605 CDS YP_001232205.1 148265499 5163902 4088249..4089538 1 NC_009483.1 hypothetical protein 4089538 5163902 Gura_3476 Geobacter uraniireducens Rf4 hypothetical protein YP_001232205.1 4088249 D 351605 CDS YP_001232206.1 148265500 5163903 4089816..4090490 1 NC_009483.1 PFAM: sigma-54 factor, interaction domain-containing protein; SMART: AAA ATPase; sigma-54 factor interaction domain-containing protein 4090490 5163903 Gura_3477 Geobacter uraniireducens Rf4 sigma-54 factor interaction domain-containing protein YP_001232206.1 4089816 D 351605 CDS YP_001232207.1 148265501 5164125 4091334..4092086 1 NC_009483.1 hypothetical protein 4092086 5164125 Gura_3479 Geobacter uraniireducens Rf4 hypothetical protein YP_001232207.1 4091334 D 351605 CDS YP_001232208.1 148265502 5164126 complement(4092187..4092348) 1 NC_009483.1 hypothetical protein 4092348 5164126 Gura_3480 Geobacter uraniireducens Rf4 hypothetical protein YP_001232208.1 4092187 R 351605 CDS YP_001232209.1 148265503 5163556 complement(4092445..4094100) 1 NC_009483.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase large subunit 4094100 5163556 Gura_3481 Geobacter uraniireducens Rf4 methylmalonyl-CoA mutase large subunit YP_001232209.1 4092445 R 351605 CDS YP_001232210.1 148265504 5163557 complement(4094141..4094545) 1 NC_009483.1 PFAM: cobalamin B12-binding domain protein; cobalamin B12-binding domain-containing protein 4094545 5163557 Gura_3482 Geobacter uraniireducens Rf4 cobalamin B12-binding domain-containing protein YP_001232210.1 4094141 R 351605 CDS YP_001232211.1 148265505 5163558 complement(4094722..4098282) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate enzyme domain protein TPP-binding; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 4098282 5163558 Gura_3483 Geobacter uraniireducens Rf4 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_001232211.1 4094722 R 351605 CDS YP_001232212.1 148265506 5164268 complement(4098441..4100690) 1 NC_009483.1 NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme 4100690 5164268 Gura_3484 Geobacter uraniireducens Rf4 malic enzyme YP_001232212.1 4098441 R 351605 CDS YP_001232213.1 148265507 5164269 complement(4100855..4101727) 1 NC_009483.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit alpha 4101727 5164269 Gura_3485 Geobacter uraniireducens Rf4 succinyl-CoA synthetase subunit alpha YP_001232213.1 4100855 R 351605 CDS YP_001232214.1 148265508 5164270 complement(4101740..4102906) 1 NC_009483.1 TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; succinyl-CoA synthetase subunit beta 4102906 5164270 Gura_3486 Geobacter uraniireducens Rf4 succinyl-CoA synthetase subunit beta YP_001232214.1 4101740 R 351605 CDS YP_001232215.1 148265509 5163898 complement(4103074..4105962) 1 NC_009483.1 PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; biotin/lipoyl attachment domain-containing protein 4105962 5163898 Gura_3487 Geobacter uraniireducens Rf4 biotin/lipoyl attachment domain-containing protein YP_001232215.1 4103074 R 351605 CDS YP_001232216.1 148265510 5163899 complement(4106089..4107813) 1 NC_009483.1 PFAM: carboxyl transferase; propionyl-CoA carboxylase 4107813 5163899 Gura_3488 Geobacter uraniireducens Rf4 propionyl-CoA carboxylase YP_001232216.1 4106089 R 351605 CDS YP_001232217.1 148265511 5163900 complement(4107893..4108456) 1 NC_009483.1 PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; XRE family transcriptional regulator 4108456 5163900 Gura_3489 Geobacter uraniireducens Rf4 XRE family transcriptional regulator YP_001232217.1 4107893 R 351605 CDS YP_001232218.1 148265512 5166757 complement(4109113..4110228) 1 NC_009483.1 glucose/sorbosone dehydrogenase-like protein 4110228 5166757 Gura_3490 Geobacter uraniireducens Rf4 glucose/sorbosone dehydrogenase-like protein YP_001232218.1 4109113 R 351605 CDS YP_001232219.1 148265513 5166758 complement(4110350..4111237) 1 NC_009483.1 GTPase or GTP-binding protein-like protein 4111237 5166758 Gura_3491 Geobacter uraniireducens Rf4 GTPase or GTP-binding protein-like protein YP_001232219.1 4110350 R 351605 CDS YP_001232220.1 148265514 5166759 complement(4111544..4112170) 1 NC_009483.1 hypothetical protein 4112170 5166759 Gura_3492 Geobacter uraniireducens Rf4 hypothetical protein YP_001232220.1 4111544 R 351605 CDS YP_001232221.1 148265515 5164232 complement(4112697..4113107) 1 NC_009483.1 PFAM: PilT protein domain protein; PilT domain-containing protein 4113107 5164232 Gura_3493 Geobacter uraniireducens Rf4 PilT domain-containing protein YP_001232221.1 4112697 R 351605 CDS YP_001232222.1 148265516 5164233 complement(4113104..4113349) 1 NC_009483.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; AbrB family transcriptional regulator 4113349 5164233 Gura_3494 Geobacter uraniireducens Rf4 AbrB family transcriptional regulator YP_001232222.1 4113104 R 351605 CDS YP_001232223.1 148265517 5164234 complement(4113469..4114431) 1 NC_009483.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; metal dependent phosphohydrolase 4114431 5164234 Gura_3495 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001232223.1 4113469 R 351605 CDS YP_001232224.1 148265518 5164413 complement(4114471..4114713) 1 NC_009483.1 hypothetical protein 4114713 5164413 Gura_3496 Geobacter uraniireducens Rf4 hypothetical protein YP_001232224.1 4114471 R 351605 CDS YP_001232225.1 148265519 5164414 complement(4115040..4116452) 1 NC_009483.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein 4116452 5164414 Gura_3497 Geobacter uraniireducens Rf4 RND efflux system outer membrane lipoprotein YP_001232225.1 4115040 R 351605 CDS YP_001232226.1 148265520 5164415 complement(4116603..4119773) 1 NC_009483.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein 4119773 5164415 Gura_3498 Geobacter uraniireducens Rf4 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001232226.1 4116603 R 351605 CDS YP_001232227.1 148265521 5164505 complement(4119829..4121016) 1 NC_009483.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 4121016 5164505 Gura_3499 Geobacter uraniireducens Rf4 RND family efflux transporter MFP subunit YP_001232227.1 4119829 R 351605 CDS YP_001232228.1 148265522 5164506 complement(4121255..4121830) 1 NC_009483.1 PFAM: regulatory protein, TetR; TetR family transcriptional regulator 4121830 5164506 Gura_3500 Geobacter uraniireducens Rf4 TetR family transcriptional regulator YP_001232228.1 4121255 R 351605 CDS YP_001232229.1 148265523 5164507 complement(4121992..4122642) 1 NC_009483.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; signal peptidase I 4122642 5164507 Gura_3501 Geobacter uraniireducens Rf4 signal peptidase I YP_001232229.1 4121992 R 351605 CDS YP_001232230.1 148265524 5164620 complement(4122851..4123417) 1 NC_009483.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 4123417 5164620 Gura_3502 Geobacter uraniireducens Rf4 ECF subfamily RNA polymerase sigma-24 factor YP_001232230.1 4122851 R 351605 CDS YP_001232231.1 148265525 5164621 complement(4123734..4124618) 1 NC_009483.1 PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding; transcription activator, effector binding 4124618 5164621 Gura_3503 Geobacter uraniireducens Rf4 transcription activator, effector binding YP_001232231.1 4123734 R 351605 CDS YP_001232232.1 148265526 5164622 complement(4124756..4126036) 1 NC_009483.1 ATPase AAA 4126036 5164622 Gura_3504 Geobacter uraniireducens Rf4 ATPase AAA YP_001232232.1 4124756 R 351605 CDS YP_001232233.1 148265527 5164450 complement(4126143..4126931) 1 NC_009483.1 PFAM: penicillin-binding protein, transpeptidase; beta-lactamase 4126931 5164450 Gura_3505 Geobacter uraniireducens Rf4 beta-lactamase YP_001232233.1 4126143 R 351605 CDS YP_001232234.1 148265528 5164451 complement(4126979..4127878) 1 NC_009483.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 4127878 5164451 Gura_3506 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001232234.1 4126979 R 351605 CDS YP_001232235.1 148265529 5164452 complement(4128011..4129462) 1 NC_009483.1 PFAM: pentapeptide repeat protein; pentapeptide repeat-containing protein 4129462 5164452 Gura_3507 Geobacter uraniireducens Rf4 pentapeptide repeat-containing protein YP_001232235.1 4128011 R 351605 CDS YP_001232236.1 148265530 5163916 complement(4129557..4129784) 1 NC_009483.1 hypothetical protein 4129784 5163916 Gura_3508 Geobacter uraniireducens Rf4 hypothetical protein YP_001232236.1 4129557 R 351605 CDS YP_001232237.1 148265531 5163917 complement(4130198..4130944) 1 NC_009483.1 PFAM: Methyltransferase type 11; type 11 methyltransferase 4130944 5163917 Gura_3509 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001232237.1 4130198 R 351605 CDS YP_001232238.1 148265532 5163918 complement(4131121..4131822) 1 NC_009483.1 PFAM: restriction endonuclease; restriction endonuclease 4131822 5163918 Gura_3510 Geobacter uraniireducens Rf4 restriction endonuclease YP_001232238.1 4131121 R 351605 CDS YP_001232239.1 148265533 5164588 complement(4131987..4133054) 1 NC_009483.1 hypothetical protein 4133054 5164588 Gura_3511 Geobacter uraniireducens Rf4 hypothetical protein YP_001232239.1 4131987 R 351605 CDS YP_001232240.1 148265534 5164589 complement(4133390..4134181) 1 NC_009483.1 PFAM: protein of unknown function DUF81; hypothetical protein 4134181 5164589 Gura_3512 Geobacter uraniireducens Rf4 hypothetical protein YP_001232240.1 4133390 R 351605 CDS YP_001232241.1 148265535 5164590 complement(4134266..4134643) 1 NC_009483.1 PFAM: helix-turn-helix, HxlR type; HxlR family transcriptional regulator 4134643 5164590 Gura_3513 Geobacter uraniireducens Rf4 HxlR family transcriptional regulator YP_001232241.1 4134266 R 351605 CDS YP_001232242.1 148265536 5164011 4134784..4135188 1 NC_009483.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 4135188 5164011 Gura_3514 Geobacter uraniireducens Rf4 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001232242.1 4134784 D 351605 CDS YP_001232243.1 148265537 5164012 complement(4135224..4135784) 1 NC_009483.1 PFAM: nitroreductase; nitroreductase 4135784 5164012 Gura_3515 Geobacter uraniireducens Rf4 nitroreductase YP_001232243.1 4135224 R 351605 CDS YP_001232244.1 148265538 5164013 complement(4135910..4136809) 1 NC_009483.1 PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 4136809 5164013 Gura_3516 Geobacter uraniireducens Rf4 beta-lactamase domain-containing protein YP_001232244.1 4135910 R 351605 CDS YP_001232245.1 148265539 5163758 complement(4136843..4137307) 1 NC_009483.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 4137307 5163758 Gura_3517 Geobacter uraniireducens Rf4 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001232245.1 4136843 R 351605 CDS YP_001232246.1 148265540 5163759 complement(4137359..4137967) 1 NC_009483.1 TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I 4137967 5163759 Gura_3518 Geobacter uraniireducens Rf4 DNA-3-methyladenine glycosylase I YP_001232246.1 4137359 R 351605 CDS YP_001232247.1 148265541 5163760 complement(4138004..4138432) 1 NC_009483.1 hypothetical protein 4138432 5163760 Gura_3519 Geobacter uraniireducens Rf4 hypothetical protein YP_001232247.1 4138004 R 351605 CDS YP_001232248.1 148265542 5163203 complement(4138538..4138975) 1 NC_009483.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4138975 5163203 Gura_3520 Geobacter uraniireducens Rf4 glyoxalase/bleomycin resistance protein/dioxygenase YP_001232248.1 4138538 R 351605 CDS YP_001232249.1 148265543 5163204 complement(4139079..4139774) 1 NC_009483.1 PFAM: Helix-turn-helix, type 11 domain protein; helix-turn-helix, type 11 domain-containing protein 4139774 5163204 Gura_3521 Geobacter uraniireducens Rf4 helix-turn-helix, type 11 domain-containing protein YP_001232249.1 4139079 R 351605 CDS YP_001232250.1 148265544 5163205 complement(4139839..4140213) 1 NC_009483.1 hypothetical protein 4140213 5163205 Gura_3522 Geobacter uraniireducens Rf4 hypothetical protein YP_001232250.1 4139839 R 351605 CDS YP_001232251.1 148265545 5166100 complement(4140427..4141083) 1 NC_009483.1 PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 4141083 5166100 Gura_3523 Geobacter uraniireducens Rf4 NADPH-dependent FMN reductase YP_001232251.1 4140427 R 351605 CDS YP_001232252.1 148265546 5166101 complement(4141150..4141512) 1 NC_009483.1 PFAM: regulatory protein, MerR; MerR family transcriptional regulator 4141512 5166101 Gura_3524 Geobacter uraniireducens Rf4 MerR family transcriptional regulator YP_001232252.1 4141150 R 351605 CDS YP_001232253.1 148265547 5166102 complement(4141720..4142262) 1 NC_009483.1 PFAM: protein of unknown function DUF1697; hypothetical protein 4142262 5166102 Gura_3525 Geobacter uraniireducens Rf4 hypothetical protein YP_001232253.1 4141720 R 351605 CDS YP_001232254.1 148265548 5166614 complement(4142383..4143369) 1 NC_009483.1 PFAM: aldo/keto reductase; aldo/keto reductase 4143369 5166614 Gura_3526 Geobacter uraniireducens Rf4 aldo/keto reductase YP_001232254.1 4142383 R 351605 CDS YP_001232255.1 148265549 5166615 complement(4143372..4143893) 1 NC_009483.1 PFAM: regulatory protein, MarR; MarR family transcriptional regulator 4143893 5166615 Gura_3527 Geobacter uraniireducens Rf4 MarR family transcriptional regulator YP_001232255.1 4143372 R 351605 CDS YP_001232256.1 148265550 5166616 complement(4144115..4144711) 1 NC_009483.1 PFAM: ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein 4144711 5166616 Gura_3528 Geobacter uraniireducens Rf4 ThiJ/PfpI domain-containing protein YP_001232256.1 4144115 R 351605 CDS YP_001232257.1 148265551 5164726 complement(4144735..4145745) 1 NC_009483.1 PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; AraC family transcriptional regulator 4145745 5164726 Gura_3529 Geobacter uraniireducens Rf4 AraC family transcriptional regulator YP_001232257.1 4144735 R 351605 CDS YP_001232258.1 148265552 5164727 complement(4145930..4146553) 1 NC_009483.1 PFAM: ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein 4146553 5164727 Gura_3530 Geobacter uraniireducens Rf4 ThiJ/PfpI domain-containing protein YP_001232258.1 4145930 R 351605 CDS YP_001232259.1 148265553 5164728 complement(4146588..4147607) 1 NC_009483.1 PFAM: Excinuclease ABC, C subunit domain protein; regulatory protein, ArsR; regulatory protein ArsR 4147607 5164728 Gura_3531 Geobacter uraniireducens Rf4 regulatory protein ArsR YP_001232259.1 4146588 R 351605 CDS YP_001232260.1 148265554 5164169 4147882..4149048 1 NC_009483.1 PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 4149048 5164169 Gura_3532 Geobacter uraniireducens Rf4 iron-containing alcohol dehydrogenase YP_001232260.1 4147882 D 351605 CDS YP_001232261.1 148265555 5164170 4149032..4150264 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; protein phosphatase 2C domain protein; putative PAS/PAC sensor protein 4150264 5164170 Gura_3533 Geobacter uraniireducens Rf4 putative PAS/PAC sensor protein YP_001232261.1 4149032 D 351605 CDS YP_001232262.1 148265556 5164171 4150375..4151154 1 NC_009483.1 catalyzes the formation of propanoyl-CoA from methylmalonyl-CoA; methylmalonyl-CoA decarboxylase 4151154 5164171 Gura_3534 Geobacter uraniireducens Rf4 methylmalonyl-CoA decarboxylase YP_001232262.1 4150375 D 351605 CDS YP_001232263.1 148265557 5163913 complement(4151815..4152108) 1 NC_009483.1 hypothetical protein 4152108 5163913 Gura_3535 Geobacter uraniireducens Rf4 hypothetical protein YP_001232263.1 4151815 R 351605 CDS YP_001232264.1 148265558 5163914 complement(4152156..4152422) 1 NC_009483.1 hypothetical protein 4152422 5163914 Gura_3536 Geobacter uraniireducens Rf4 hypothetical protein YP_001232264.1 4152156 R 351605 CDS YP_001232265.1 148265559 5163915 complement(4152622..4153965) 1 NC_009483.1 PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase 4153965 5163915 Gura_3537 Geobacter uraniireducens Rf4 aldehyde dehydrogenase YP_001232265.1 4152622 R 351605 CDS YP_001232266.1 148265560 5163770 4154422..4156404 1 NC_009483.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; SMART: AAA ATPase; Fis family GAF modulated sigma54 specific transcriptional regulator 4156404 5163770 Gura_3538 Geobacter uraniireducens Rf4 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001232266.1 4154422 D 351605 CDS YP_001232267.1 148265561 5163771 complement(4156516..4157004) 1 NC_009483.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; molybdenum cofactor synthesis domain-containing protein 4157004 5163771 Gura_3539 Geobacter uraniireducens Rf4 molybdenum cofactor synthesis domain-containing protein YP_001232267.1 4156516 R 351605 CDS YP_001232268.1 148265562 5163772 complement(4157083..4157565) 1 NC_009483.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; molybdenum cofactor biosynthesis protein C 4157565 5163772 Gura_3540 Geobacter uraniireducens Rf4 molybdenum cofactor biosynthesis protein C YP_001232268.1 4157083 R 351605 CDS YP_001232269.1 148265563 5164014 complement(4157680..4158897) 1 NC_009483.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; molybdenum cofactor synthesis domain-containing protein 4158897 5164014 Gura_3541 Geobacter uraniireducens Rf4 molybdenum cofactor synthesis domain-containing protein YP_001232269.1 4157680 R 351605 CDS YP_001232270.1 148265564 5164015 complement(4158945..4160042) 1 NC_009483.1 PFAM: ABC transporter related; TOBE domain protein; transport-associated protein OB domain protein; SMART: AAA ATPase; ABC transporter-like protein 4160042 5164015 Gura_3542 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001232270.1 4158945 R 351605 CDS YP_001232271.1 148265565 5164016 complement(4160039..4160737) 1 NC_009483.1 PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4160737 5164016 Gura_3543 Geobacter uraniireducens Rf4 binding-protein-dependent transport system inner membrane protein YP_001232271.1 4160039 R 351605 CDS YP_001232272.1 148265566 5163877 complement(4160737..4161594) 1 NC_009483.1 tungstate ABC transporter permease component-like protein 4161594 5163877 Gura_3544 Geobacter uraniireducens Rf4 tungstate ABC transporter permease component-like protein YP_001232272.1 4160737 R 351605 CDS YP_001232273.1 148265567 5163878 complement(4161718..4162101) 1 NC_009483.1 PFAM: molybdopterin biosynthesis MoaE protein; molybdopterin biosynthesis MoaE protein 4162101 5163878 Gura_3545 Geobacter uraniireducens Rf4 molybdopterin biosynthesis MoaE protein YP_001232273.1 4161718 R 351605 CDS YP_001232274.1 148265568 5163879 complement(4162414..4163211) 1 NC_009483.1 PFAM: regulatory protein, IclR; regulatory protein IclR 4163211 5163879 Gura_3546 Geobacter uraniireducens Rf4 regulatory protein IclR YP_001232274.1 4162414 R 351605 CDS YP_001232275.1 148265569 5163585 complement(4163208..4163849) 1 NC_009483.1 hypothetical protein 4163849 5163585 Gura_3547 Geobacter uraniireducens Rf4 hypothetical protein YP_001232275.1 4163208 R 351605 CDS YP_001232276.1 148265570 5163586 complement(4163871..4164116) 1 NC_009483.1 PFAM: thiamineS protein; sulfur transfer protein ThiS 4164116 5163586 Gura_3548 Geobacter uraniireducens Rf4 sulfur transfer protein ThiS YP_001232276.1 4163871 R 351605 CDS YP_001232277.1 148265571 5163587 4164282..4164536 1 NC_009483.1 hypothetical protein 4164536 5163587 Gura_3549 Geobacter uraniireducens Rf4 hypothetical protein YP_001232277.1 4164282 D 351605 CDS YP_001232278.1 148265572 5163235 complement(4164643..4166379) 1 NC_009483.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase-like; aldehyde ferredoxin oxidoreductase 4166379 5163235 Gura_3550 Geobacter uraniireducens Rf4 aldehyde ferredoxin oxidoreductase YP_001232278.1 4164643 R 351605 CDS YP_001232279.1 148265573 5163236 complement(4166536..4167651) 1 NC_009483.1 PFAM: domain of unknown function DUF1745; hypothetical protein 4167651 5163236 Gura_3551 Geobacter uraniireducens Rf4 hypothetical protein YP_001232279.1 4166536 R 351605 CDS YP_001232280.1 148265574 5163237 complement(4167667..4167870) 1 NC_009483.1 hypothetical protein 4167870 5163237 Gura_3552 Geobacter uraniireducens Rf4 hypothetical protein YP_001232280.1 4167667 R 351605 CDS YP_001232281.1 148265575 5163031 complement(4167960..4169393) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 4169393 5163031 Gura_3553 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001232281.1 4167960 R 351605 CDS YP_001232282.1 148265576 5163032 complement(4169467..4170357) 1 NC_009483.1 PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta 4170357 5163032 Gura_3554 Geobacter uraniireducens Rf4 electron transfer flavoprotein subunit beta YP_001232282.1 4169467 R 351605 CDS YP_001232283.1 148265577 5163033 complement(4170444..4170722) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4170722 5163033 Gura_3555 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001232283.1 4170444 R 351605 CDS YP_001232284.1 148265578 5163301 complement(4170719..4172017) 1 NC_009483.1 PFAM: monooxygenase, FAD-binding; HI0933 family protein; FAD dependent oxidoreductase; FAD dependent oxidoreductase 4172017 5163301 Gura_3556 Geobacter uraniireducens Rf4 FAD dependent oxidoreductase YP_001232284.1 4170719 R 351605 CDS YP_001232285.1 148265579 5163302 complement(4172014..4173018) 1 NC_009483.1 PFAM: electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 4173018 5163302 Gura_3557 Geobacter uraniireducens Rf4 electron transfer flavoprotein subunit alpha YP_001232285.1 4172014 R 351605 CDS YP_001232286.1 148265580 5163303 complement(4173018..4174979) 1 NC_009483.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase 4174979 5163303 Gura_3558 Geobacter uraniireducens Rf4 NADH:flavin oxidoreductase YP_001232286.1 4173018 R 351605 CDS YP_001232287.1 148265581 5163012 complement(4175004..4176047) 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 4176047 5163012 Gura_3559 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001232287.1 4175004 R 351605 CDS YP_001232288.1 148265582 5163013 complement(4176037..4176291) 1 NC_009483.1 hypothetical protein 4176291 5163013 Gura_3560 Geobacter uraniireducens Rf4 hypothetical protein YP_001232288.1 4176037 R 351605 CDS YP_001232289.1 148265583 5163014 complement(4176953..4178212) 1 NC_009483.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 4178212 5163014 Gura_3561 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001232289.1 4176953 R 351605 CDS YP_001232290.1 148265584 5162864 complement(4178269..4178685) 1 NC_009483.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin-like metal-binding protein 4178685 5162864 Gura_3562 Geobacter uraniireducens Rf4 hemerythrin-like metal-binding protein YP_001232290.1 4178269 R 351605 CDS YP_001232291.1 148265585 5162865 complement(4178709..4179326) 1 NC_009483.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; metal dependent phosphohydrolase 4179326 5162865 Gura_3563 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001232291.1 4178709 R 351605 CDS YP_001232292.1 148265586 5163782 complement(4180555..4182480) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 4182480 5163782 Gura_3565 Geobacter uraniireducens Rf4 PAS/PAC sensor signal transduction histidine kinase YP_001232292.1 4180555 R 351605 CDS YP_001232293.1 148265587 5163783 complement(4182610..4184016) 1 NC_009483.1 PFAM: VWA containing CoxE family protein; VWA containing CoxE family protein 4184016 5163783 Gura_3566 Geobacter uraniireducens Rf4 VWA containing CoxE family protein YP_001232293.1 4182610 R 351605 CDS YP_001232294.1 148265588 5163784 complement(4184019..4184969) 1 NC_009483.1 PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATPase 4184969 5163784 Gura_3567 Geobacter uraniireducens Rf4 ATPase YP_001232294.1 4184019 R 351605 CDS YP_001232295.1 148265589 5164853 complement(4185125..4186330) 1 NC_009483.1 PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 4186330 5164853 Gura_3568 Geobacter uraniireducens Rf4 iron-containing alcohol dehydrogenase YP_001232295.1 4185125 R 351605 CDS YP_001232296.1 148265590 5164854 complement(4186798..4187895) 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 4187895 5164854 Gura_3569 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001232296.1 4186798 R 351605 CDS YP_001232297.1 148265591 5164855 complement(4188450..4188887) 1 NC_009483.1 PFAM: MOSC domain containing protein; MOSC domain-containing protein 4188887 5164855 Gura_3570 Geobacter uraniireducens Rf4 MOSC domain-containing protein YP_001232297.1 4188450 R 351605 CDS YP_001232298.1 148265592 5164906 complement(4189028..4190005) 1 NC_009483.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 4190005 5164906 Gura_3571 Geobacter uraniireducens Rf4 molybdenum cofactor biosynthesis protein A YP_001232298.1 4189028 R 351605 CDS YP_001232299.1 148265593 5164907 complement(4190058..4191431) 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 4191431 5164907 Gura_3572 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001232299.1 4190058 R 351605 CDS YP_001232300.1 148265594 5164908 complement(4191419..4192627) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 4192627 5164908 Gura_3573 Geobacter uraniireducens Rf4 PAS/PAC sensor signal transduction histidine kinase YP_001232300.1 4191419 R 351605 CDS YP_001232301.1 148265595 5163764 complement(4192629..4193792) 1 NC_009483.1 PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 4193792 5163764 Gura_3574 Geobacter uraniireducens Rf4 iron-containing alcohol dehydrogenase YP_001232301.1 4192629 R 351605 CDS YP_001232302.1 148265596 5163765 4194647..4195891 1 NC_009483.1 hypothetical protein 4195891 5163765 Gura_3575 Geobacter uraniireducens Rf4 hypothetical protein YP_001232302.1 4194647 D 351605 CDS YP_001232303.1 148265597 5163766 4195960..4196232 1 NC_009483.1 hypothetical protein 4196232 5163766 Gura_3576 Geobacter uraniireducens Rf4 hypothetical protein YP_001232303.1 4195960 D 351605 CDS YP_001232304.1 148265598 5164244 4196305..4196835 1 NC_009483.1 hypothetical protein 4196835 5164244 Gura_3577 Geobacter uraniireducens Rf4 hypothetical protein YP_001232304.1 4196305 D 351605 CDS YP_001232305.1 148265599 5164245 4196878..4197153 1 NC_009483.1 hypothetical protein 4197153 5164245 Gura_3578 Geobacter uraniireducens Rf4 hypothetical protein YP_001232305.1 4196878 D 351605 CDS YP_001232306.1 148265600 5164246 4197328..4198218 1 NC_009483.1 hypothetical protein 4198218 5164246 Gura_3579 Geobacter uraniireducens Rf4 hypothetical protein YP_001232306.1 4197328 D 351605 CDS YP_001232307.1 148265601 5163000 4198258..4198557 1 NC_009483.1 PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 4198557 5163000 Gura_3580 Geobacter uraniireducens Rf4 antibiotic biosynthesis monooxygenase YP_001232307.1 4198258 D 351605 CDS YP_001232308.1 148265602 5163001 4199102..4199680 1 NC_009483.1 heterodisulfide reductase subunit C-like protein 4199680 5163001 Gura_3581 Geobacter uraniireducens Rf4 heterodisulfide reductase subunit C-like protein YP_001232308.1 4199102 D 351605 CDS YP_001232309.1 148265603 5163002 4199924..4200811 1 NC_009483.1 PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; CoB--CoM heterodisulfide reductase 4200811 5163002 Gura_3582 Geobacter uraniireducens Rf4 CoB--CoM heterodisulfide reductase YP_001232309.1 4199924 D 351605 CDS YP_001232310.1 148265604 5163108 4200962..4202959 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4202959 5163108 Gura_3583 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001232310.1 4200962 D 351605 CDS YP_001232311.1 148265605 5163109 4202984..4203550 1 NC_009483.1 PFAM: methyl-viologen-reducing hydrogenase, delta subunit; methyl-viologen-reducing hydrogenase subunit delta 4203550 5163109 Gura_3584 Geobacter uraniireducens Rf4 methyl-viologen-reducing hydrogenase subunit delta YP_001232311.1 4202984 D 351605 CDS YP_001232312.1 148265606 5163110 4203668..4204615 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4204615 5163110 Gura_3585 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001232312.1 4203668 D 351605 CDS YP_001232313.1 148265607 5162924 4204785..4205789 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4205789 5162924 Gura_3586 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001232313.1 4204785 D 351605 CDS YP_001232314.1 148265608 5162925 4205870..4206712 1 NC_009483.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding subunit 4206712 5162925 Gura_3587 Geobacter uraniireducens Rf4 oxidoreductase FAD/NAD(P)-binding subunit YP_001232314.1 4205870 D 351605 CDS YP_001232315.1 148265609 5162926 4206971..4208311 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 4208311 5162926 Gura_3588 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001232315.1 4206971 D 351605 CDS YP_001232316.1 148265610 5164205 complement(4208321..4209016) 1 NC_009483.1 hypothetical protein 4209016 5164205 Gura_3589 Geobacter uraniireducens Rf4 hypothetical protein YP_001232316.1 4208321 R 351605 CDS YP_001232317.1 148265611 5164206 complement(4209032..4209610) 1 NC_009483.1 hypothetical protein 4209610 5164206 Gura_3590 Geobacter uraniireducens Rf4 hypothetical protein YP_001232317.1 4209032 R 351605 CDS YP_001232318.1 148265612 5164207 complement(4209864..4213325) 1 NC_009483.1 PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase 4213325 5164207 Gura_3591 Geobacter uraniireducens Rf4 alpha amylase YP_001232318.1 4209864 R 351605 CDS YP_001232319.1 148265613 5167090 complement(4213387..4213638) 1 NC_009483.1 hypothetical protein 4213638 5167090 Gura_3592 Geobacter uraniireducens Rf4 hypothetical protein YP_001232319.1 4213387 R 351605 CDS YP_001232320.1 148265614 5167091 4214005..4215423 1 NC_009483.1 PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 4215423 5167091 Gura_3593 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001232320.1 4214005 D 351605 CDS YP_001232321.1 148265615 5167092 4215623..4216225 1 NC_009483.1 hypothetical protein 4216225 5167092 Gura_3594 Geobacter uraniireducens Rf4 hypothetical protein YP_001232321.1 4215623 D 351605 CDS YP_001232322.1 148265616 5165214 complement(4216233..4218764) 1 NC_009483.1 RND efflux transporter 4218764 5165214 Gura_3595 Geobacter uraniireducens Rf4 RND efflux transporter YP_001232322.1 4216233 R 351605 CDS YP_001232323.1 148265617 5165215 complement(4218782..4219390) 1 NC_009483.1 PFAM: outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 4219390 5165215 Gura_3596 Geobacter uraniireducens Rf4 outer membrane lipoprotein carrier protein LolA YP_001232323.1 4218782 R 351605 CDS YP_001232324.1 148265618 5165216 complement(4219567..4220610) 1 NC_009483.1 PFAM: protein of unknown function DUF1016; hypothetical protein 4220610 5165216 Gura_3597 Geobacter uraniireducens Rf4 hypothetical protein YP_001232324.1 4219567 R 351605 CDS YP_001232325.1 148265619 5163346 complement(4220626..4221612) 1 NC_009483.1 TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; death-on-curing family protein 4221612 5163346 Gura_3598 Geobacter uraniireducens Rf4 death-on-curing family protein YP_001232325.1 4220626 R 351605 CDS YP_001232326.1 148265620 5163347 complement(4221684..4223132) 1 NC_009483.1 hypothetical protein 4223132 5163347 Gura_3599 Geobacter uraniireducens Rf4 hypothetical protein YP_001232326.1 4221684 R 351605 CDS YP_001232327.1 148265621 5163348 complement(4223162..4225378) 1 NC_009483.1 PFAM: N-6 DNA methylase; protein of unknown function DUF450; N-6 DNA methylase 4225378 5163348 Gura_3600 Geobacter uraniireducens Rf4 N-6 DNA methylase YP_001232327.1 4223162 R 351605 CDS YP_001232328.1 148265622 5162804 complement(4225453..4226334) 1 NC_009483.1 PFAM: restriction endonuclease; restriction endonuclease 4226334 5162804 Gura_3601 Geobacter uraniireducens Rf4 restriction endonuclease YP_001232328.1 4225453 R 351605 CDS YP_001232329.1 148265623 5162805 complement(4226446..4226838) 1 NC_009483.1 PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 4226838 5162805 Gura_3602 Geobacter uraniireducens Rf4 helix-turn-helix domain-containing protein YP_001232329.1 4226446 R 351605 CDS YP_001232330.1 148265624 5162806 complement(4226831..4227145) 1 NC_009483.1 hypothetical protein 4227145 5162806 Gura_3603 Geobacter uraniireducens Rf4 hypothetical protein YP_001232330.1 4226831 R 351605 CDS YP_001232331.1 148265625 5163352 complement(4227353..4227766) 1 NC_009483.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ 4227766 5163352 Gura_3604 Geobacter uraniireducens Rf4 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ YP_001232331.1 4227353 R 351605 CDS YP_001232332.1 148265626 5163353 complement(4227726..4228775) 1 NC_009483.1 PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase 4228775 5163353 Gura_3605 Geobacter uraniireducens Rf4 beta-ketoacyl synthase YP_001232332.1 4227726 R 351605 CDS YP_001232333.1 148265627 5163354 complement(4228772..4230022) 1 NC_009483.1 PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase 4230022 5163354 Gura_3606 Geobacter uraniireducens Rf4 beta-ketoacyl synthase YP_001232333.1 4228772 R 351605 CDS YP_001232334.1 148265628 5163408 complement(4230313..4231053) 1 NC_009483.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 4231053 5163408 Gura_3607 Geobacter uraniireducens Rf4 short-chain dehydrogenase/reductase SDR YP_001232334.1 4230313 R 351605 CDS YP_001232335.1 148265629 5163409 complement(4231266..4232645) 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 4232645 5163409 Gura_3608 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001232335.1 4231266 R 351605 CDS YP_001232336.1 148265630 5163410 complement(4232645..4233163) 1 NC_009483.1 PFAM: thioesterase superfamily protein; thioesterase superfamily protein 4233163 5163410 Gura_3609 Geobacter uraniireducens Rf4 thioesterase superfamily protein YP_001232336.1 4232645 R 351605 CDS YP_001232337.1 148265631 5164942 complement(4233160..4233999) 1 NC_009483.1 (acyl-carrier-protein) S-malonyltransferase-like protein 4233999 5164942 Gura_3610 Geobacter uraniireducens Rf4 (acyl-carrier-protein) S-malonyltransferase-like protein YP_001232337.1 4233160 R 351605 CDS YP_001232338.1 148265632 5164943 complement(4234175..4235464) 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 4235464 5164943 Gura_3611 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001232338.1 4234175 R 351605 CDS YP_001232339.1 148265633 5164944 complement(4235461..4235718) 1 NC_009483.1 hypothetical protein 4235718 5164944 Gura_3612 Geobacter uraniireducens Rf4 hypothetical protein YP_001232339.1 4235461 R 351605 CDS YP_001232340.1 148265634 5166465 complement(4235719..4236621) 1 NC_009483.1 PFAM: lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase 4236621 5166465 Gura_3613 Geobacter uraniireducens Rf4 lipid A biosynthesis acyltransferase YP_001232340.1 4235719 R 351605 CDS YP_001232341.1 148265635 5166466 complement(4236654..4238009) 1 NC_009483.1 PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 4238009 5166466 Gura_3614 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001232341.1 4236654 R 351605 CDS YP_001232342.1 148265636 5166467 complement(4238006..4239403) 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 4239403 5166467 Gura_3615 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001232342.1 4238006 R 351605 CDS YP_001232343.1 148265637 5166675 complement(4239461..4240129) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 4240129 5166675 Gura_3616 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001232343.1 4239461 R 351605 CDS YP_001232344.1 148265638 5166676 complement(4240114..4240959) 1 NC_009483.1 PFAM: polysaccharide deacetylase; polysaccharide deacetylase 4240959 5166676 Gura_3617 Geobacter uraniireducens Rf4 polysaccharide deacetylase YP_001232344.1 4240114 R 351605 CDS YP_001232345.1 148265639 5166677 4241221..4242309 1 NC_009483.1 PFAM: aminodeoxychorismate lyase; aminodeoxychorismate lyase 4242309 5166677 Gura_3618 Geobacter uraniireducens Rf4 aminodeoxychorismate lyase YP_001232345.1 4241221 D 351605 CDS YP_001232346.1 148265640 5166578 4242278..4244221 1 NC_009483.1 PFAM: TPR repeat-containing protein; heat shock protein DnaJ domain protein; response regulator receiver; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; response regulator receiver protein 4244221 5166578 Gura_3619 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001232346.1 4242278 D 351605 CDS YP_001232347.1 148265641 5166579 complement(4244285..4244548) 1 NC_009483.1 hypothetical protein 4244548 5166579 Gura_3620 Geobacter uraniireducens Rf4 hypothetical protein YP_001232347.1 4244285 R 351605 CDS YP_001232348.1 148265642 5166580 complement(4244813..4245982) 1 NC_009483.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; hypothetical protein 4245982 5166580 Gura_3621 Geobacter uraniireducens Rf4 hypothetical protein YP_001232348.1 4244813 R 351605 CDS YP_001232349.1 148265643 5166328 4246280..4247044 1 NC_009483.1 TIGRFAM: putative undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; putative undecaprenol kinase 4247044 5166328 Gura_3622 Geobacter uraniireducens Rf4 putative undecaprenol kinase YP_001232349.1 4246280 D 351605 CDS YP_001232350.1 148265644 5166329 4247188..4248102 1 NC_009483.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein 4248102 5166329 Gura_3623 Geobacter uraniireducens Rf4 phosphonate ABC transporter periplasmic phosphonate-binding protein YP_001232350.1 4247188 D 351605 CDS YP_001232351.1 148265645 5166330 4248099..4249577 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 4249577 5166330 Gura_3624 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001232351.1 4248099 D 351605 CDS YP_001232352.1 148265646 5163072 4249564..4250913 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 4250913 5163072 Gura_3625 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001232352.1 4249564 D 351605 CDS YP_001232353.1 148265647 5163073 4251399..4252298 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 4252298 5163073 Gura_3626 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001232353.1 4251399 D 351605 CDS YP_001232354.1 148265648 5163074 4252333..4254840 1 NC_009483.1 hypothetical protein 4254840 5163074 Gura_3627 Geobacter uraniireducens Rf4 hypothetical protein YP_001232354.1 4252333 D 351605 CDS YP_001232355.1 148265649 5164235 complement(4255169..4256455) 1 NC_009483.1 transposase 4256455 5164235 Gura_3628 Geobacter uraniireducens Rf4 transposase YP_001232355.1 4255169 R 351605 CDS YP_001232356.1 148265650 5164236 4256607..4258100 1 NC_009483.1 PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein 4258100 5164236 Gura_3629 Geobacter uraniireducens Rf4 peptidase M16 domain-containing protein YP_001232356.1 4256607 D 351605 CDS YP_001232357.1 148265651 5164237 4258097..4259521 1 NC_009483.1 PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein 4259521 5164237 Gura_3630 Geobacter uraniireducens Rf4 peptidase M16 domain-containing protein YP_001232357.1 4258097 D 351605 CDS YP_001232358.1 148265652 5165452 4259544..4259651 1 NC_009483.1 hypothetical protein 4259651 5165452 Gura_3631 Geobacter uraniireducens Rf4 hypothetical protein YP_001232358.1 4259544 D 351605 CDS YP_001232359.1 148265653 5165453 complement(4259729..4260679) 1 NC_009483.1 PFAM: protein of unknown function DUF1568; Chromosomal replication initiator, DnaA C-terminal domain; hypothetical protein 4260679 5165453 Gura_3632 Geobacter uraniireducens Rf4 hypothetical protein YP_001232359.1 4259729 R 351605 CDS YP_001232360.1 148265654 5165454 complement(4260811..4261758) 1 NC_009483.1 PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 4261758 5165454 Gura_3633 Geobacter uraniireducens Rf4 alpha/beta hydrolase fold protein YP_001232360.1 4260811 R 351605 CDS YP_001232361.1 148265655 5163025 complement(4261872..4262036) 1 NC_009483.1 hypothetical protein 4262036 5163025 Gura_3634 Geobacter uraniireducens Rf4 hypothetical protein YP_001232361.1 4261872 R 351605 CDS YP_001232362.1 148265656 5163026 complement(4262020..4262199) 1 NC_009483.1 hypothetical protein 4262199 5163026 Gura_3635 Geobacter uraniireducens Rf4 hypothetical protein YP_001232362.1 4262020 R 351605 CDS YP_001232363.1 148265657 5163027 complement(4262229..4263869) 1 NC_009483.1 TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; YidE/YbjL duplication 4263869 5163027 Gura_3636 Geobacter uraniireducens Rf4 YidE/YbjL duplication YP_001232363.1 4262229 R 351605 CDS YP_001232364.1 148265658 5166945 complement(4264288..4264824) 1 NC_009483.1 hypothetical protein 4264824 5166945 Gura_3638 Geobacter uraniireducens Rf4 hypothetical protein YP_001232364.1 4264288 R 351605 CDS YP_001232365.1 148265659 5166946 complement(4265131..4267662) 1 NC_009483.1 PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase 4267662 5166946 Gura_3639 Geobacter uraniireducens Rf4 molybdopterin oxidoreductase YP_001232365.1 4265131 R 351605 CDS YP_001232366.1 148265660 5164253 complement(4267814..4269832) 1 NC_009483.1 PFAM: glucose-inhibited division protein A; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4269832 5164253 Gura_3640 Geobacter uraniireducens Rf4 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001232366.1 4267814 R 351605 CDS YP_001232367.1 148265661 5164254 4270136..4271260 1 NC_009483.1 leucyl aminopeptidase 4271260 5164254 Gura_3641 Geobacter uraniireducens Rf4 leucyl aminopeptidase YP_001232367.1 4270136 D 351605 CDS YP_001232368.1 148265662 5164255 4271395..4273029 1 NC_009483.1 PFAM: protein of unknown function DUF342; hypothetical protein 4273029 5164255 Gura_3642 Geobacter uraniireducens Rf4 hypothetical protein YP_001232368.1 4271395 D 351605 CDS YP_001232369.1 148265663 5164350 4273080..4273727 1 NC_009483.1 TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 4273727 5164350 Gura_3643 Geobacter uraniireducens Rf4 dephospho-CoA kinase YP_001232369.1 4273080 D 351605 CDS YP_001232370.1 148265664 5164351 complement(4273967..4274749) 1 NC_009483.1 PFAM: regulatory protein, IclR; regulatory protein IclR 4274749 5164351 Gura_3644 Geobacter uraniireducens Rf4 regulatory protein IclR YP_001232370.1 4273967 R 351605 CDS YP_001232371.1 148265665 5164352 4275148..4275603 1 NC_009483.1 PFAM: UspA domain protein; UspA domain-containing protein 4275603 5164352 Gura_3645 Geobacter uraniireducens Rf4 UspA domain-containing protein YP_001232371.1 4275148 D 351605 CDS YP_001232372.1 148265666 5166817 4275720..4277288 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 4277288 5166817 Gura_3646 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001232372.1 4275720 D 351605 CDS YP_001232373.1 148265667 5166818 complement(4277405..4278820) 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 4278820 5166818 Gura_3647 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001232373.1 4277405 R 351605 CDS YP_001232374.1 148265668 5166819 4279513..4279761 1 NC_009483.1 hypothetical protein 4279761 5166819 Gura_3648 Geobacter uraniireducens Rf4 hypothetical protein YP_001232374.1 4279513 D 351605 CDS YP_001232375.1 148265669 5165171 4279929..4280309 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 4280309 5165171 Gura_3649 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001232375.1 4279929 D 351605 CDS YP_001232376.1 148265670 5165172 4280360..4280605 1 NC_009483.1 hypothetical protein 4280605 5165172 Gura_3650 Geobacter uraniireducens Rf4 hypothetical protein YP_001232376.1 4280360 D 351605 CDS YP_001232377.1 148265671 5165173 4280669..4280836 1 NC_009483.1 hypothetical protein 4280836 5165173 Gura_3651 Geobacter uraniireducens Rf4 hypothetical protein YP_001232377.1 4280669 D 351605 CDS YP_001232378.1 148265672 5165902 4280937..4281467 1 NC_009483.1 hypothetical protein 4281467 5165902 Gura_3652 Geobacter uraniireducens Rf4 hypothetical protein YP_001232378.1 4280937 D 351605 CDS YP_001232379.1 148265673 5165903 4281529..4282452 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 4282452 5165903 Gura_3653 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_001232379.1 4281529 D 351605 CDS YP_001232380.1 148265674 5165904 4282449..4283846 1 NC_009483.1 polysulfide reductase-like protein 4283846 5165904 Gura_3654 Geobacter uraniireducens Rf4 polysulfide reductase-like protein YP_001232380.1 4282449 D 351605 CDS YP_001232381.1 148265675 5165922 4283918..4284682 1 NC_009483.1 hypothetical protein 4284682 5165922 Gura_3655 Geobacter uraniireducens Rf4 hypothetical protein YP_001232381.1 4283918 D 351605 CDS YP_001232382.1 148265676 5165923 4284837..4285703 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; histidine kinase 4285703 5165923 Gura_3656 Geobacter uraniireducens Rf4 histidine kinase YP_001232382.1 4284837 D 351605 CDS YP_001232383.1 148265677 5165924 4285920..4286465 1 NC_009483.1 hypothetical protein 4286465 5165924 Gura_3657 Geobacter uraniireducens Rf4 hypothetical protein YP_001232383.1 4285920 D 351605 CDS YP_001232384.1 148265678 5166702 4286795..4286998 1 NC_009483.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; thiamine biosynthesis protein ThiS 4286998 5166702 Gura_3658 Geobacter uraniireducens Rf4 thiamine biosynthesis protein ThiS YP_001232384.1 4286795 D 351605 CDS YP_001232385.1 148265679 5166703 4287022..4287804 1 NC_009483.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 4287804 thiG 5166703 thiG Geobacter uraniireducens Rf4 thiazole synthase YP_001232385.1 4287022 D 351605 CDS YP_001232386.1 148265680 5166602 4287801..4288463 1 NC_009483.1 TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 4288463 5166602 Gura_3660 Geobacter uraniireducens Rf4 thiamine-phosphate pyrophosphorylase YP_001232386.1 4287801 D 351605 CDS YP_001232387.1 148265681 5166603 4288465..4289424 1 NC_009483.1 TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; putative radical SAM protein 4289424 5166603 Gura_3661 Geobacter uraniireducens Rf4 putative radical SAM protein YP_001232387.1 4288465 D 351605 CDS YP_001232388.1 148265682 5166604 4289855..4291519 1 NC_009483.1 PFAM: AAA-4 family protein; putative transcriptional regulator 4291519 5166604 Gura_3662 Geobacter uraniireducens Rf4 putative transcriptional regulator YP_001232388.1 4289855 D 351605 CDS YP_001232389.1 148265683 5165778 complement(4291503..4291769) 1 NC_009483.1 hypothetical protein 4291769 5165778 Gura_3663 Geobacter uraniireducens Rf4 hypothetical protein YP_001232389.1 4291503 R 351605 CDS YP_001232390.1 148265684 5165779 4291966..4292340 1 NC_009483.1 hypothetical protein 4292340 5165779 Gura_3664 Geobacter uraniireducens Rf4 hypothetical protein YP_001232390.1 4291966 D 351605 CDS YP_001232391.1 148265685 5165780 4292428..4293642 1 NC_009483.1 PFAM: transposase, mutator type; transposase, mutator type 4293642 5165780 Gura_3665 Geobacter uraniireducens Rf4 transposase, mutator type YP_001232391.1 4292428 D 351605 CDS YP_001232392.1 148265686 5166947 4293761..4294417 1 NC_009483.1 PFAM: fumarylacetoacetate (FAA) hydrolase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 4294417 5166947 Gura_3666 Geobacter uraniireducens Rf4 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_001232392.1 4293761 D 351605 CDS YP_001232393.1 148265687 5166948 complement(4294736..4295185) 1 NC_009483.1 hypothetical protein 4295185 5166948 Gura_3667 Geobacter uraniireducens Rf4 hypothetical protein YP_001232393.1 4294736 R 351605 CDS YP_001232394.1 148265688 5166949 complement(4295219..4296100) 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 4296100 5166949 Gura_3668 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001232394.1 4295219 R 351605 CDS YP_001232395.1 148265689 5165153 complement(4296113..4296343) 1 NC_009483.1 hypothetical protein 4296343 5165153 Gura_3669 Geobacter uraniireducens Rf4 hypothetical protein YP_001232395.1 4296113 R 351605 CDS YP_001232396.1 148265690 5165154 complement(4296402..4296602) 1 NC_009483.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 4296602 5165154 Gura_3670 Geobacter uraniireducens Rf4 cold-shock DNA-binding domain-containing protein YP_001232396.1 4296402 R 351605 CDS YP_001232397.1 148265691 5165155 complement(4296808..4299468) 1 NC_009483.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 4299468 5165155 Gura_3671 Geobacter uraniireducens Rf4 pyruvate phosphate dikinase YP_001232397.1 4296808 R 351605 CDS YP_001232398.1 148265692 5167066 complement(4299724..4301790) 1 NC_009483.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 4301790 glyS 5167066 glyS Geobacter uraniireducens Rf4 glycyl-tRNA synthetase subunit beta YP_001232398.1 4299724 R 351605 CDS YP_001232399.1 148265693 5167067 complement(4301790..4302665) 1 NC_009483.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 4302665 glyQ 5167067 glyQ Geobacter uraniireducens Rf4 glycyl-tRNA synthetase subunit alpha YP_001232399.1 4301790 R 351605 CDS YP_001232400.1 148265694 5167068 4302994..4303809 1 NC_009483.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 4303809 5167068 Gura_3674 Geobacter uraniireducens Rf4 formamidopyrimidine-DNA glycosylase YP_001232400.1 4302994 D 351605 CDS YP_001232401.1 148265695 5163183 complement(4303906..4304349) 1 NC_009483.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 4304349 rplI 5163183 rplI Geobacter uraniireducens Rf4 50S ribosomal protein L9 YP_001232401.1 4303906 R 351605 CDS YP_001232402.1 148265696 5163184 complement(4304373..4305317) 1 NC_009483.1 hypothetical protein 4305317 5163184 Gura_3676 Geobacter uraniireducens Rf4 hypothetical protein YP_001232402.1 4304373 R 351605 CDS YP_001232403.1 148265697 5163185 complement(4305333..4305608) 1 NC_009483.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 4305608 rpsR 5163185 rpsR Geobacter uraniireducens Rf4 30S ribosomal protein S18 YP_001232403.1 4305333 R 351605 CDS YP_001232404.1 148265698 5162682 complement(4305613..4305999) 1 NC_009483.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 4305999 rpsF 5162682 rpsF Geobacter uraniireducens Rf4 30S ribosomal protein S6 YP_001232404.1 4305613 R 351605 CDS YP_001232405.1 148265699 5162683 complement(4306364..4307458) 1 NC_009483.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 4307458 5162683 Gura_3679 Geobacter uraniireducens Rf4 GTP-dependent nucleic acid-binding protein EngD YP_001232405.1 4306364 R 351605 CDS YP_001232406.1 148265700 5162684 complement(4307470..4308045) 1 NC_009483.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 4308045 5162684 Gura_3680 Geobacter uraniireducens Rf4 peptidyl-tRNA hydrolase YP_001232406.1 4307470 R 351605 CDS YP_001232407.1 148265701 5166678 complement(4308067..4308651) 1 NC_009483.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 4308651 5166678 Gura_3681 Geobacter uraniireducens Rf4 50S ribosomal protein L25/general stress protein Ctc YP_001232407.1 4308067 R 351605 CDS YP_001232408.1 148265702 5166679 complement(4308711..4309661) 1 NC_009483.1 TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 4309661 5166679 Gura_3682 Geobacter uraniireducens Rf4 ribose-phosphate pyrophosphokinase YP_001232408.1 4308711 R 351605 CDS YP_001232409.1 148265703 5165339 complement(4309824..4310666) 1 NC_009483.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 4310666 5165339 Gura_3683 Geobacter uraniireducens Rf4 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_001232409.1 4309824 R 351605 CDS YP_001232410.1 148265704 5165340 complement(4310889..4311587) 1 NC_009483.1 PFAM: carbonic anhydrase; carbonic anhydrase 4311587 5165340 Gura_3684 Geobacter uraniireducens Rf4 carbonic anhydrase YP_001232410.1 4310889 R 351605 CDS YP_001232411.1 148265705 5165896 complement(4311772..4312485) 1 NC_009483.1 PFAM: alanine racemase domain protein; alanine racemase domain-containing protein 4312485 5165896 Gura_3685 Geobacter uraniireducens Rf4 alanine racemase domain-containing protein YP_001232411.1 4311772 R 351605 CDS YP_001232412.1 148265706 5165897 complement(4312585..4313169) 1 NC_009483.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 4313169 5165897 Gura_3686 Geobacter uraniireducens Rf4 Maf-like protein YP_001232412.1 4312585 R 351605 CDS YP_001232413.1 148265707 5165898 complement(4313150..4313440) 1 NC_009483.1 hypothetical protein 4313440 5165898 Gura_3687 Geobacter uraniireducens Rf4 hypothetical protein YP_001232413.1 4313150 R 351605 CDS YP_001232414.1 148265708 5165810 complement(4313495..4314802) 1 NC_009483.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 4314802 5165810 Gura_3688 Geobacter uraniireducens Rf4 tRNA (uracil-5-)-methyltransferase Gid YP_001232414.1 4313495 R 351605 CDS YP_001232415.1 148265709 5165811 complement(4314910..4317180) 1 NC_009483.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining; maintains net negative superhelicity; DNA topoisomerase I 4317180 5165811 Gura_3689 Geobacter uraniireducens Rf4 DNA topoisomerase I YP_001232415.1 4314910 R 351605 CDS YP_001232416.1 148265710 5165812 complement(4317223..4318302) 1 NC_009483.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; DNA protecting protein DprA 4318302 5165812 Gura_3690 Geobacter uraniireducens Rf4 DNA protecting protein DprA YP_001232416.1 4317223 R 351605 CDS YP_001232417.1 148265711 5162961 complement(4318354..4319376) 1 NC_009483.1 PFAM: Peptidoglycan-binding LysM; peptidoglycan-binding LysM 4319376 5162961 Gura_3691 Geobacter uraniireducens Rf4 peptidoglycan-binding LysM YP_001232417.1 4318354 R 351605 CDS YP_001232418.1 148265712 5162962 complement(4319394..4320113) 1 NC_009483.1 TIGRFAM: Tetratricopeptide domain protein; tetratricopeptide domain-containing protein 4320113 5162962 Gura_3692 Geobacter uraniireducens Rf4 tetratricopeptide domain-containing protein YP_001232418.1 4319394 R 351605 CDS YP_001232419.1 148265713 5162963 4320453..4321667 1 NC_009483.1 PFAM: peptidase U32; peptidase U32 4321667 5162963 Gura_3693 Geobacter uraniireducens Rf4 peptidase U32 YP_001232419.1 4320453 D 351605 CDS YP_001232420.1 148265714 5165127 4321744..4323405 1 NC_009483.1 PFAM: glycosyl transferase, family 39; glycosyl transferase family protein 4323405 5165127 Gura_3694 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001232420.1 4321744 D 351605 CDS YP_001232421.1 148265715 5165128 4323474..4324637 1 NC_009483.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; DegT/DnrJ/EryC1/StrS aminotransferase 4324637 5165128 Gura_3695 Geobacter uraniireducens Rf4 DegT/DnrJ/EryC1/StrS aminotransferase YP_001232421.1 4323474 D 351605 CDS YP_001232422.1 148265716 5165129 4324729..4325667 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 4325667 5165129 Gura_3696 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001232422.1 4324729 D 351605 CDS YP_001232423.1 148265717 5165253 4325785..4326711 1 NC_009483.1 PFAM: formyl transferase domain protein; putative formyltransferase 4326711 5165253 Gura_3697 Geobacter uraniireducens Rf4 putative formyltransferase YP_001232423.1 4325785 D 351605 CDS YP_001232424.1 148265718 5165254 4326808..4327848 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase family protein 4327848 5165254 Gura_3698 Geobacter uraniireducens Rf4 NAD-dependent epimerase/dehydratase family protein YP_001232424.1 4326808 D 351605 CDS YP_001232425.1 148265719 5165255 4327954..4328847 1 NC_009483.1 PFAM: polysaccharide deacetylase; polysaccharide deacetylase 4328847 5165255 Gura_3699 Geobacter uraniireducens Rf4 polysaccharide deacetylase YP_001232425.1 4327954 D 351605 CDS YP_001232426.1 148265720 5164190 4328852..4329130 1 NC_009483.1 hypothetical protein 4329130 5164190 Gura_3700 Geobacter uraniireducens Rf4 hypothetical protein YP_001232426.1 4328852 D 351605 CDS YP_001232427.1 148265721 5164191 4329123..4330505 1 NC_009483.1 PFAM: peptidase U62, modulator of DNA gyrase; C69 family peptidase 4330505 5164191 Gura_3701 Geobacter uraniireducens Rf4 C69 family peptidase YP_001232427.1 4329123 D 351605 CDS YP_001232428.1 148265722 5164192 complement(4330525..4331391) 1 NC_009483.1 hypothetical protein 4331391 5164192 Gura_3702 Geobacter uraniireducens Rf4 hypothetical protein YP_001232428.1 4330525 R 351605 CDS YP_001232429.1 148265723 5165516 complement(4331450..4332664) 1 NC_009483.1 PFAM: transposase, mutator type; transposase, mutator type 4332664 5165516 Gura_3703 Geobacter uraniireducens Rf4 transposase, mutator type YP_001232429.1 4331450 R 351605 CDS YP_001232430.1 148265724 5165517 4333121..4334335 1 NC_009483.1 PFAM: transposase, mutator type; transposase, mutator type 4334335 5165517 Gura_3704 Geobacter uraniireducens Rf4 transposase, mutator type YP_001232430.1 4333121 D 351605 CDS YP_001232431.1 148265725 5165518 complement(4334430..4335479) 1 NC_009483.1 PFAM: Mammalian cell entry related domain protein; hypothetical protein 4335479 5165518 Gura_3705 Geobacter uraniireducens Rf4 hypothetical protein YP_001232431.1 4334430 R 351605 CDS YP_001232432.1 148265726 5165766 complement(4335559..4336335) 1 NC_009483.1 PFAM: protein of unknown function DUF140; hypothetical protein 4336335 5165766 Gura_3706 Geobacter uraniireducens Rf4 hypothetical protein YP_001232432.1 4335559 R 351605 CDS YP_001232433.1 148265727 5165767 complement(4336335..4337849) 1 NC_009483.1 hypothetical protein 4337849 5165767 Gura_3707 Geobacter uraniireducens Rf4 hypothetical protein YP_001232433.1 4336335 R 351605 CDS YP_001232434.1 148265728 5165768 complement(4338241..4338768) 1 NC_009483.1 PFAM: aconitate hydratase domain protein; aconitate hydratase domain-containing protein 4338768 5165768 Gura_3708 Geobacter uraniireducens Rf4 aconitate hydratase domain-containing protein YP_001232434.1 4338241 R 351605 CDS YP_001232435.1 148265729 5162607 complement(4338790..4340073) 1 NC_009483.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit 4340073 5162607 Gura_3709 Geobacter uraniireducens Rf4 3-isopropylmalate dehydratase large subunit YP_001232435.1 4338790 R 351605 CDS YP_001232436.1 148265730 5162608 4340239..4341294 1 NC_009483.1 PFAM: conserved hypothetical protein 730; hypothetical protein 4341294 5162608 Gura_3710 Geobacter uraniireducens Rf4 hypothetical protein YP_001232436.1 4340239 D 351605 CDS YP_001232437.1 148265731 5162609 4341481..4341681 1 NC_009483.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 4341681 5162609 Gura_3711 Geobacter uraniireducens Rf4 cold-shock DNA-binding domain-containing protein YP_001232437.1 4341481 D 351605 CDS YP_001232438.1 148265732 5164888 complement(4341758..4343569) 1 NC_009483.1 hypothetical protein 4343569 5164888 Gura_3712 Geobacter uraniireducens Rf4 hypothetical protein YP_001232438.1 4341758 R 351605 CDS YP_001232439.1 148265733 5164889 complement(4343596..4344096) 1 NC_009483.1 hypothetical protein 4344096 5164889 Gura_3713 Geobacter uraniireducens Rf4 hypothetical protein YP_001232439.1 4343596 R 351605 CDS YP_001232440.1 148265734 5164890 complement(4344382..4345338) 1 NC_009483.1 hypothetical protein 4345338 5164890 Gura_3714 Geobacter uraniireducens Rf4 hypothetical protein YP_001232440.1 4344382 R 351605 CDS YP_001232441.1 148265735 5165601 complement(4345760..4347310) 1 NC_009483.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 4347310 5165601 Gura_3715 Geobacter uraniireducens Rf4 2-isopropylmalate synthase YP_001232441.1 4345760 R 351605 CDS YP_001232442.1 148265736 5165602 complement(4347748..4348545) 1 NC_009483.1 TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase 4348545 5165602 Gura_3716 Geobacter uraniireducens Rf4 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_001232442.1 4347748 R 351605 CDS YP_001232443.1 148265737 5165603 complement(4348542..4349183) 1 NC_009483.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 4349183 5165603 Gura_3717 Geobacter uraniireducens Rf4 phosphatidylserine decarboxylase YP_001232443.1 4348542 R 351605 CDS YP_001232444.1 148265738 5164533 complement(4349306..4350322) 1 NC_009483.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 4350322 5164533 Gura_3718 Geobacter uraniireducens Rf4 ketol-acid reductoisomerase YP_001232444.1 4349306 R 351605 CDS YP_001232445.1 148265739 5164534 complement(4350377..4350868) 1 NC_009483.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 4350868 ilvH 5164534 ilvH Geobacter uraniireducens Rf4 acetolactate synthase 3 regulatory subunit YP_001232445.1 4350377 R 351605 CDS YP_001232446.1 148265740 5164535 complement(4350956..4352656) 1 NC_009483.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; acetolactate synthase, large subunit type 4352656 5164535 Gura_3720 Geobacter uraniireducens Rf4 acetolactate synthase, large subunit type YP_001232446.1 4350956 R 351605 CDS YP_001232447.1 148265741 5162988 complement(4352732..4354393) 1 NC_009483.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 4354393 5162988 Gura_3721 Geobacter uraniireducens Rf4 dihydroxy-acid dehydratase YP_001232447.1 4352732 R 351605 CDS YP_001232448.1 148265742 5162989 complement(4354605..4355477) 1 NC_009483.1 hypothetical protein 4355477 5162989 Gura_3722 Geobacter uraniireducens Rf4 hypothetical protein YP_001232448.1 4354605 R 351605 CDS YP_001232449.1 148265743 5162990 complement(4355492..4362352) 1 NC_009483.1 PFAM: Fibronectin, type III domain protein; fibronectin I domain-containing protein 4362352 5162990 Gura_3723 Geobacter uraniireducens Rf4 fibronectin I domain-containing protein YP_001232449.1 4355492 R 351605 CDS YP_001232450.1 148265744 5165943 complement(4362367..4367442) 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 4367442 5165943 Gura_3724 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001232450.1 4362367 R 351605 CDS YP_001232451.1 148265745 5165944 complement(4367797..4368483) 1 NC_009483.1 PFAM: peptidase M22, glycoprotease; peptidase M22, glycoprotease 4368483 5165944 Gura_3725 Geobacter uraniireducens Rf4 peptidase M22, glycoprotease YP_001232451.1 4367797 R 351605 CDS YP_001232452.1 148265746 5165945 complement(4368500..4369567) 1 NC_009483.1 TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; putative membrane-associated zinc metalloprotease 4369567 5165945 Gura_3726 Geobacter uraniireducens Rf4 putative membrane-associated zinc metalloprotease YP_001232452.1 4368500 R 351605 CDS YP_001232453.1 148265747 5166594 complement(4369619..4370779) 1 NC_009483.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4370779 5166594 Gura_3727 Geobacter uraniireducens Rf4 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_001232453.1 4369619 R 351605 CDS YP_001232454.1 148265748 5166595 complement(4370855..4371601) 1 NC_009483.1 PFAM: phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 4371601 5166595 Gura_3728 Geobacter uraniireducens Rf4 phosphatidate cytidylyltransferase YP_001232454.1 4370855 R 351605 CDS YP_001232455.1 148265749 5166596 complement(4371690..4372460) 1 NC_009483.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 4372460 5166596 Gura_3729 Geobacter uraniireducens Rf4 undecaprenyl pyrophosphate synthase YP_001232455.1 4371690 R 351605 CDS YP_001232456.1 148265750 5166459 complement(4372658..4373215) 1 NC_009483.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 4373215 frr 5166459 frr Geobacter uraniireducens Rf4 ribosome recycling factor YP_001232456.1 4372658 R 351605 CDS YP_001232457.1 148265751 5166460 complement(4373217..4373936) 1 NC_009483.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 4373936 pyrH 5166460 pyrH Geobacter uraniireducens Rf4 uridylate kinase YP_001232457.1 4373217 R 351605 CDS YP_001232458.1 148265752 5166461 complement(4374042..4374692) 1 NC_009483.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 4374692 tsf 5166461 tsf Geobacter uraniireducens Rf4 elongation factor Ts YP_001232458.1 4374042 R 351605 CDS YP_001232459.1 148265753 5163168 complement(4374804..4375574) 1 NC_009483.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 4375574 rpsB 5163168 rpsB Geobacter uraniireducens Rf4 30S ribosomal protein S2 YP_001232459.1 4374804 R 351605 CDS YP_001232460.1 148265754 5163169 4375789..4376958 1 NC_009483.1 PFAM: permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 4376958 5163169 Gura_3734 Geobacter uraniireducens Rf4 YjgP/YjgQ family permease YP_001232460.1 4375789 D 351605 CDS YP_001232461.1 148265755 5163170 4376955..4378034 1 NC_009483.1 PFAM: permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 4378034 5163170 Gura_3735 Geobacter uraniireducens Rf4 YjgP/YjgQ family permease YP_001232461.1 4376955 D 351605 CDS YP_001232462.1 148265756 5165488 4378094..4379023 1 NC_009483.1 hypothetical protein 4379023 5165488 Gura_3736 Geobacter uraniireducens Rf4 hypothetical protein YP_001232462.1 4378094 D 351605 CDS YP_001232463.1 148265757 5165489 complement(4379163..4379579) 1 NC_009483.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4379579 5165489 Gura_3737 Geobacter uraniireducens Rf4 glyoxalase/bleomycin resistance protein/dioxygenase YP_001232463.1 4379163 R 351605 CDS YP_001232464.1 148265758 5165490 complement(4379587..4380327) 1 NC_009483.1 PFAM: cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis transmembrane protein 4380327 5165490 Gura_3738 Geobacter uraniireducens Rf4 cytochrome c biogenesis transmembrane protein YP_001232464.1 4379587 R 351605 CDS YP_001232465.1 148265759 5163706 complement(4380337..4380849) 1 NC_009483.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 4380849 5163706 Gura_3739 Geobacter uraniireducens Rf4 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_001232465.1 4380337 R 351605 CDS YP_001232466.1 148265760 5163707 complement(4380846..4382210) 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 4382210 5163707 Gura_3740 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001232466.1 4380846 R 351605 CDS YP_001232467.1 148265761 5163708 complement(4382280..4383383) 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 4383383 5163708 Gura_3741 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001232467.1 4382280 R 351605 CDS YP_001232468.1 148265762 5165491 complement(4383480..4383737) 1 NC_009483.1 hypothetical protein 4383737 5165491 Gura_3742 Geobacter uraniireducens Rf4 hypothetical protein YP_001232468.1 4383480 R 351605 CDS YP_001232469.1 148265763 5165492 complement(4383888..4384856) 1 NC_009483.1 PFAM: Polyprenyl synthetase; polyprenyl synthetase 4384856 5165492 Gura_3743 Geobacter uraniireducens Rf4 polyprenyl synthetase YP_001232469.1 4383888 R 351605 CDS YP_001232470.1 148265764 5165493 4385051..4386022 1 NC_009483.1 PFAM: response regulator receiver; GAF domain protein; putative GAF sensor protein 4386022 5165493 Gura_3744 Geobacter uraniireducens Rf4 putative GAF sensor protein YP_001232470.1 4385051 D 351605 CDS YP_001232471.1 148265765 5163358 complement(4386098..4388143) 1 NC_009483.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; diguanylate cyclase 4388143 5163358 Gura_3745 Geobacter uraniireducens Rf4 diguanylate cyclase YP_001232471.1 4386098 R 351605 CDS YP_001232472.1 148265766 5163359 4388531..4389181 1 NC_009483.1 PFAM: helix-turn-helix domain protein; peptidase S24, S26A and S26B; putative prophage repressor 4389181 5163359 Gura_3746 Geobacter uraniireducens Rf4 putative prophage repressor YP_001232472.1 4388531 D 351605 CDS YP_001232473.1 148265767 5163360 complement(4389192..4389644) 1 NC_009483.1 hypothetical protein 4389644 5163360 Gura_3747 Geobacter uraniireducens Rf4 hypothetical protein YP_001232473.1 4389192 R 351605 CDS YP_001232474.1 148265768 5163153 complement(4389676..4390272) 1 NC_009483.1 hypothetical protein 4390272 5163153 Gura_3748 Geobacter uraniireducens Rf4 hypothetical protein YP_001232474.1 4389676 R 351605 CDS YP_001232475.1 148265769 5163154 4390622..4392154 1 NC_009483.1 Enables the enzymatic reduction of mercuric ions to elemental mercury; mercuric reductase 4392154 5163154 Gura_3749 Geobacter uraniireducens Rf4 mercuric reductase YP_001232475.1 4390622 D 351605 CDS YP_001232476.1 148265770 5163155 4392133..4392852 1 NC_009483.1 hypothetical protein 4392852 5163155 Gura_3750 Geobacter uraniireducens Rf4 hypothetical protein YP_001232476.1 4392133 D 351605 CDS YP_001232477.1 148265771 5163132 4392854..4393867 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 4393867 5163132 Gura_3751 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001232477.1 4392854 D 351605 CDS YP_001232478.1 148265772 5163133 4393928..4395520 1 NC_009483.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 4395520 pgi 5163133 pgi Geobacter uraniireducens Rf4 glucose-6-phosphate isomerase YP_001232478.1 4393928 D 351605 CDS YP_001232479.1 148265773 5163134 complement(4395547..4396395) 1 NC_009483.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase 4396395 5163134 Gura_3753 Geobacter uraniireducens Rf4 uroporphyrin-III C/tetrapyrrole methyltransferase YP_001232479.1 4395547 R 351605 CDS YP_001232480.1 148265774 5166664 complement(4396515..4397336) 1 NC_009483.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 4397336 nadE 5166664 nadE Geobacter uraniireducens Rf4 NAD synthetase YP_001232480.1 4396515 R 351605 CDS YP_001232481.1 148265775 5166665 complement(4397336..4398187) 1 NC_009483.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 4398187 5166665 Gura_3755 Geobacter uraniireducens Rf4 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001232481.1 4397336 R 351605 CDS YP_001232482.1 148265776 5166666 complement(4398315..4398698) 1 NC_009483.1 PFAM: protein of unknown function UPF0102; hypothetical protein 4398698 5166666 Gura_3756 Geobacter uraniireducens Rf4 hypothetical protein YP_001232482.1 4398315 R 351605 CDS YP_001232483.1 148265777 5166628 complement(4398695..4399345) 1 NC_009483.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 4399345 rnhB 5166628 rnhB Geobacter uraniireducens Rf4 ribonuclease HII YP_001232483.1 4398695 R 351605 CDS YP_001232484.1 148265778 5166629 complement(4399550..4399906) 1 NC_009483.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 4399906 rplS 5166629 rplS Geobacter uraniireducens Rf4 50S ribosomal protein L19 YP_001232484.1 4399550 R 351605 CDS YP_001232485.1 148265779 5166630 complement(4400061..4400642) 1 NC_009483.1 hypothetical protein 4400642 5166630 Gura_3759 Geobacter uraniireducens Rf4 hypothetical protein YP_001232485.1 4400061 R 351605 CDS YP_001232486.1 148265780 5166226 complement(4400632..4401375) 1 NC_009483.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 4401375 trmD 5166226 trmD Geobacter uraniireducens Rf4 tRNA (guanine-N(1)-)-methyltransferase YP_001232486.1 4400632 R 351605 CDS YP_001232487.1 148265781 5166227 complement(4401372..4401893) 1 NC_009483.1 TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; 16S rRNA processing protein RimM 4401893 5166227 Gura_3761 Geobacter uraniireducens Rf4 16S rRNA processing protein RimM YP_001232487.1 4401372 R 351605 CDS YP_001232488.1 148265782 5166228 complement(4401893..4402123) 1 NC_009483.1 PFAM: KH, type 1, domain protein; KH domain-containing protein 4402123 5166228 Gura_3762 Geobacter uraniireducens Rf4 KH domain-containing protein YP_001232488.1 4401893 R 351605 CDS YP_001232489.1 148265783 5163697 complement(4402178..4402444) 1 NC_009483.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 4402444 rpsP 5163697 rpsP Geobacter uraniireducens Rf4 30S ribosomal protein S16 YP_001232489.1 4402178 R 351605 CDS YP_001232490.1 148265784 5163698 complement(4402495..4403844) 1 NC_009483.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle protein 4403844 5163698 Gura_3764 Geobacter uraniireducens Rf4 signal recognition particle protein YP_001232490.1 4402495 R 351605 CDS YP_001232491.1 148265785 5163699 complement(4403986..4404567) 1 NC_009483.1 PFAM: SirA family protein; SirA family protein 4404567 5163699 Gura_3765 Geobacter uraniireducens Rf4 SirA family protein YP_001232491.1 4403986 R 351605 CDS YP_001232492.1 148265786 5163931 complement(4404595..4404855) 1 NC_009483.1 hypothetical protein 4404855 5163931 Gura_3766 Geobacter uraniireducens Rf4 hypothetical protein YP_001232492.1 4404595 R 351605 CDS YP_001232493.1 148265787 5163932 4404981..4405238 1 NC_009483.1 hypothetical protein 4405238 5163932 Gura_3767 Geobacter uraniireducens Rf4 hypothetical protein YP_001232493.1 4404981 D 351605 CDS YP_001232494.1 148265788 5163933 4405252..4405710 1 NC_009483.1 hypothetical protein 4405710 5163933 Gura_3768 Geobacter uraniireducens Rf4 hypothetical protein YP_001232494.1 4405252 D 351605 CDS YP_001232495.1 148265789 5164096 complement(4406542..4406928) 1 NC_009483.1 hypothetical protein 4406928 5164096 Gura_3770 Geobacter uraniireducens Rf4 hypothetical protein YP_001232495.1 4406542 R 351605 CDS YP_001232496.1 148265790 5164097 complement(4407144..4407860) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 4407860 5164097 Gura_3771 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001232496.1 4407144 R 351605 CDS YP_001232497.1 148265791 5164576 complement(4407897..4409501) 1 NC_009483.1 hypothetical protein 4409501 5164576 Gura_3772 Geobacter uraniireducens Rf4 hypothetical protein YP_001232497.1 4407897 R 351605 CDS YP_001232498.1 148265792 5164578 complement(4410225..4410995) 1 NC_009483.1 PFAM: putative RNA methylase; methyltransferase small; methyltransferase small 4410995 5164578 Gura_3774 Geobacter uraniireducens Rf4 methyltransferase small YP_001232498.1 4410225 R 351605 CDS YP_001232499.1 148265793 5165211 complement(4410992..4413421) 1 NC_009483.1 hypothetical protein 4413421 5165211 Gura_3775 Geobacter uraniireducens Rf4 hypothetical protein YP_001232499.1 4410992 R 351605 CDS YP_001232500.1 148265794 5165212 complement(4413492..4414607) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 4414607 5165212 Gura_3776 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001232500.1 4413492 R 351605 CDS YP_001232501.1 148265795 5165213 complement(4414618..4415706) 1 NC_009483.1 ADP-heptose--LPS heptosyltransferase-like protein 4415706 5165213 Gura_3777 Geobacter uraniireducens Rf4 ADP-heptose--LPS heptosyltransferase-like protein YP_001232501.1 4414618 R 351605 CDS YP_001232502.1 148265796 5164871 complement(4415711..4416859) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 4416859 5164871 Gura_3778 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001232502.1 4415711 R 351605 CDS YP_001232503.1 148265797 5164872 complement(4416896..4417852) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 4417852 5164872 Gura_3779 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001232503.1 4416896 R 351605 CDS YP_001232504.1 148265798 5164873 complement(4417891..4418886) 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 4418886 5164873 Gura_3780 Geobacter uraniireducens Rf4 NAD-dependent epimerase/dehydratase YP_001232504.1 4417891 R 351605 CDS YP_001232505.1 148265799 5165625 complement(4418914..4419498) 1 NC_009483.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 4419498 5165625 Gura_3781 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001232505.1 4418914 R 351605 CDS YP_001232506.1 148265800 5165626 complement(4419970..4421214) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 4421214 5165626 Gura_3782 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001232506.1 4419970 R 351605 CDS YP_001232507.1 148265801 5165627 complement(4421226..4422401) 1 NC_009483.1 hypothetical protein 4422401 5165627 Gura_3783 Geobacter uraniireducens Rf4 hypothetical protein YP_001232507.1 4421226 R 351605 CDS YP_001232508.1 148265802 5163423 complement(4422647..4423609) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 4423609 5163423 Gura_3784 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001232508.1 4422647 R 351605 CDS YP_001232509.1 148265803 5163424 complement(4423690..4425018) 1 NC_009483.1 PFAM: polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 4425018 5163424 Gura_3785 Geobacter uraniireducens Rf4 polysaccharide biosynthesis protein YP_001232509.1 4423690 R 351605 CDS YP_001232510.1 148265804 5163425 complement(4425002..4426039) 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 4426039 5163425 Gura_3786 Geobacter uraniireducens Rf4 NAD-dependent epimerase/dehydratase YP_001232510.1 4425002 R 351605 CDS YP_001232511.1 148265805 5166109 complement(4426039..4426935) 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 4426935 5166109 Gura_3787 Geobacter uraniireducens Rf4 NAD-dependent epimerase/dehydratase YP_001232511.1 4426039 R 351605 CDS YP_001232512.1 148265806 5166110 complement(4426932..4428281) 1 NC_009483.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; DegT/DnrJ/EryC1/StrS aminotransferase 4428281 5166110 Gura_3788 Geobacter uraniireducens Rf4 DegT/DnrJ/EryC1/StrS aminotransferase YP_001232512.1 4426932 R 351605 CDS YP_001232513.1 148265807 5166111 complement(4428326..4429411) 1 NC_009483.1 TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; CDP-glucose 4,6-dehydratase 4429411 5166111 Gura_3789 Geobacter uraniireducens Rf4 CDP-glucose 4,6-dehydratase YP_001232513.1 4428326 R 351605 CDS YP_001232514.1 148265808 5164818 complement(4429489..4430259) 1 NC_009483.1 TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate cytidylyltransferase 4430259 5164818 Gura_3790 Geobacter uraniireducens Rf4 glucose-1-phosphate cytidylyltransferase YP_001232514.1 4429489 R 351605 CDS YP_001232515.1 148265809 5164819 complement(4430317..4430931) 1 NC_009483.1 PFAM: regulatory protein, MarR; regulatory protein MarR 4430931 5164819 Gura_3791 Geobacter uraniireducens Rf4 regulatory protein MarR YP_001232515.1 4430317 R 351605 CDS YP_001232516.1 148265810 5164820 complement(4431016..4431396) 1 NC_009483.1 hypothetical protein 4431396 5164820 Gura_3792 Geobacter uraniireducens Rf4 hypothetical protein YP_001232516.1 4431016 R 351605 CDS YP_001232517.1 148265811 5165359 complement(4431400..4432113) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 4432113 5165359 Gura_3793 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001232517.1 4431400 R 351605 CDS YP_001232518.1 148265812 5165360 complement(4432128..4434101) 1 NC_009483.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein 4434101 5165360 Gura_3794 Geobacter uraniireducens Rf4 TPR repeat-containing protein YP_001232518.1 4432128 R 351605 CDS YP_001232519.1 148265813 5165361 complement(4434375..4435388) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 4435388 5165361 Gura_3795 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001232519.1 4434375 R 351605 CDS YP_001232520.1 148265814 5166046 complement(4435385..4436548) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 4436548 5166046 Gura_3796 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001232520.1 4435385 R 351605 CDS YP_001232521.1 148265815 5166047 complement(4436545..4437576) 1 NC_009483.1 PFAM: glycosyl transferase, family 9; glycosyl transferase family protein 4437576 5166047 Gura_3797 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001232521.1 4436545 R 351605 CDS YP_001232522.1 148265816 5166048 complement(4437596..4438477) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 4438477 5166048 Gura_3798 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001232522.1 4437596 R 351605 CDS YP_001232523.1 148265817 5166158 complement(4438486..4439646) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 4439646 5166158 Gura_3799 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001232523.1 4438486 R 351605 CDS YP_001232524.1 148265818 5166159 complement(4439766..4440926) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 4440926 5166159 Gura_3800 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001232524.1 4439766 R 351605 CDS YP_001232525.1 148265819 5166160 complement(4440923..4441879) 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 4441879 5166160 Gura_3801 Geobacter uraniireducens Rf4 NAD-dependent epimerase/dehydratase YP_001232525.1 4440923 R 351605 CDS YP_001232526.1 148265820 5166591 complement(4441926..4445972) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 4445972 5166591 Gura_3802 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001232526.1 4441926 R 351605 CDS YP_001232527.1 148265821 5166592 complement(4446049..4446528) 1 NC_009483.1 hypothetical protein 4446528 5166592 Gura_3803 Geobacter uraniireducens Rf4 hypothetical protein YP_001232527.1 4446049 R 351605 CDS YP_001232528.1 148265822 5166593 complement(4446679..4448427) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 4448427 5166593 Gura_3804 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001232528.1 4446679 R 351605 CDS YP_001232529.1 148265823 5166025 complement(4448477..4449385) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 4449385 5166025 Gura_3805 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001232529.1 4448477 R 351605 CDS YP_001232530.1 148265824 5166026 complement(4449637..4451454) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 4451454 5166026 Gura_3806 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001232530.1 4449637 R 351605 CDS YP_001232531.1 148265825 5166027 complement(4451703..4452044) 1 NC_009483.1 hypothetical protein 4452044 5166027 Gura_3807 Geobacter uraniireducens Rf4 hypothetical protein YP_001232531.1 4451703 R 351605 CDS YP_001232532.1 148265826 5165610 complement(4452319..4453653) 1 NC_009483.1 PFAM: glycosyl transferase, family 9; glycosyl transferase family protein 4453653 5165610 Gura_3808 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001232532.1 4452319 R 351605 CDS YP_001232533.1 148265827 5165611 complement(4453696..4454760) 1 NC_009483.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 4454760 5165611 Gura_3809 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001232533.1 4453696 R 351605 CDS YP_001232534.1 148265828 5165612 complement(4454757..4455608) 1 NC_009483.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 4455608 5165612 Gura_3810 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001232534.1 4454757 R 351605 CDS YP_001232535.1 148265829 5166453 complement(4455610..4456629) 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 4456629 5166453 Gura_3811 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001232535.1 4455610 R 351605 CDS YP_001232536.1 148265830 5166454 complement(4456623..4457357) 1 NC_009483.1 PFAM: sulfotransferase; sulfotransferase 4457357 5166454 Gura_3812 Geobacter uraniireducens Rf4 sulfotransferase YP_001232536.1 4456623 R 351605 CDS YP_001232537.1 148265831 5166455 complement(4457347..4459482) 1 NC_009483.1 PFAM: sulfotransferase; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4459482 5166455 Gura_3813 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001232537.1 4457347 R 351605 CDS YP_001232538.1 148265832 5165571 complement(4459680..4460009) 1 NC_009483.1 hypothetical protein 4460009 5165571 Gura_3814 Geobacter uraniireducens Rf4 hypothetical protein YP_001232538.1 4459680 R 351605 CDS YP_001232539.1 148265833 5165572 complement(4459996..4460259) 1 NC_009483.1 hypothetical protein 4460259 5165572 Gura_3815 Geobacter uraniireducens Rf4 hypothetical protein YP_001232539.1 4459996 R 351605 CDS YP_001232540.1 148265834 5165573 complement(4460405..4460776) 1 NC_009483.1 crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown; hypothetical protein 4460776 5165573 Gura_3816 Geobacter uraniireducens Rf4 hypothetical protein YP_001232540.1 4460405 R 351605 CDS YP_001232541.1 148265835 5165503 complement(4460895..4461707) 1 NC_009483.1 PFAM: ABC-2 type transporter; ABC-2 type transporter 4461707 5165503 Gura_3817 Geobacter uraniireducens Rf4 ABC-2 type transporter YP_001232541.1 4460895 R 351605 CDS YP_001232542.1 148265836 5165504 complement(4461942..4462226) 1 NC_009483.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; XRE family plasmid maintenance system antidote protein 4462226 5165504 Gura_3818 Geobacter uraniireducens Rf4 XRE family plasmid maintenance system antidote protein YP_001232542.1 4461942 R 351605 CDS YP_001232543.1 148265837 5166235 4462631..4463155 1 NC_009483.1 PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 4463155 5166235 Gura_3820 Geobacter uraniireducens Rf4 transposase IS3/IS911 family protein YP_001232543.1 4462631 D 351605 CDS YP_001232544.1 148265838 5166236 4463236..4464192 1 NC_009483.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 4464192 5166236 Gura_3821 Geobacter uraniireducens Rf4 integrase catalytic subunit YP_001232544.1 4463236 D 351605 CDS YP_001232545.1 148265839 5166237 complement(4464541..4465227) 1 NC_009483.1 hypothetical protein 4465227 5166237 Gura_3822 Geobacter uraniireducens Rf4 hypothetical protein YP_001232545.1 4464541 R 351605 CDS YP_001232546.1 148265840 5166381 complement(4465810..4466091) 1 NC_009483.1 hypothetical protein 4466091 5166381 Gura_3823 Geobacter uraniireducens Rf4 hypothetical protein YP_001232546.1 4465810 R 351605 CDS YP_001232547.1 148265841 5166382 join(4466148..4466504,4466503..4467318) 1 NC_009483.1 hypothetical protein 4467318 5166382 Gura_3824 Geobacter uraniireducens Rf4 hypothetical protein YP_001232547.1 4466148 D 351605 CDS YP_001232548.1 148265842 5166383 complement(4467589..4467945) 1 NC_009483.1 crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown; hypothetical protein 4467945 5166383 Gura_3825 Geobacter uraniireducens Rf4 hypothetical protein YP_001232548.1 4467589 R 351605 CDS YP_001232549.1 148265843 5166361 complement(4468252..4468584) 1 NC_009483.1 hypothetical protein 4468584 5166361 Gura_3826 Geobacter uraniireducens Rf4 hypothetical protein YP_001232549.1 4468252 R 351605 CDS YP_001232550.1 148265844 5166362 complement(4468581..4468949) 1 NC_009483.1 hypothetical protein 4468949 5166362 Gura_3827 Geobacter uraniireducens Rf4 hypothetical protein YP_001232550.1 4468581 R 351605 CDS YP_001232551.1 148265845 5166363 complement(4469047..4470894) 1 NC_009483.1 TIGRFAM: small GTP-binding protein; sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor, GTP-binding; sulfate adenylyltransferase, large subunit 4470894 5166363 Gura_3828 Geobacter uraniireducens Rf4 sulfate adenylyltransferase, large subunit YP_001232551.1 4469047 R 351605 CDS YP_001232552.1 148265846 5166373 complement(4470884..4471255) 1 NC_009483.1 PFAM: S23 ribosomal protein; S23 ribosomal protein 4471255 5166373 Gura_3829 Geobacter uraniireducens Rf4 S23 ribosomal protein YP_001232552.1 4470884 R 351605 CDS YP_001232553.1 148265847 5166374 complement(4471416..4472213) 1 NC_009483.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 4472213 5166374 Gura_3830 Geobacter uraniireducens Rf4 sulfate adenylyltransferase subunit 2 YP_001232553.1 4471416 R 351605 CDS YP_001232554.1 148265848 5166375 complement(4472365..4472991) 1 NC_009483.1 PFAM: adenylylsulfate kinase; adenylylsulfate kinase 4472991 5166375 Gura_3831 Geobacter uraniireducens Rf4 adenylylsulfate kinase YP_001232554.1 4472365 R 351605 CDS YP_001232555.1 148265849 5166998 4473362..4475185 1 NC_009483.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; YVTN beta-propeller repeat-containing protein 4475185 5166998 Gura_3832 Geobacter uraniireducens Rf4 YVTN beta-propeller repeat-containing protein YP_001232555.1 4473362 D 351605 CDS YP_001232556.1 148265850 5166999 complement(4475587..4476780) 1 NC_009483.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 4476780 5166999 Gura_3833 Geobacter uraniireducens Rf4 group 1 glycosyl transferase YP_001232556.1 4475587 R 351605 CDS YP_001232557.1 148265851 5167000 complement(4476773..4477717) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 4477717 5167000 Gura_3834 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001232557.1 4476773 R 351605 CDS YP_001232558.1 148265852 5166715 complement(4477741..4478745) 1 NC_009483.1 hypothetical protein 4478745 5166715 Gura_3835 Geobacter uraniireducens Rf4 hypothetical protein YP_001232558.1 4477741 R 351605 CDS YP_001232559.1 148265853 5166716 complement(4478841..4481057) 1 NC_009483.1 hypothetical protein 4481057 5166716 Gura_3836 Geobacter uraniireducens Rf4 hypothetical protein YP_001232559.1 4478841 R 351605 CDS YP_001232560.1 148265854 5166717 complement(4481652..4482365) 1 NC_009483.1 hypothetical protein 4482365 5166717 Gura_3837 Geobacter uraniireducens Rf4 hypothetical protein YP_001232560.1 4481652 R 351605 CDS YP_001232561.1 148265855 5165994 complement(4482590..4483672) 1 NC_009483.1 PFAM: NHL repeat containing protein; NHL repeat-containing protein 4483672 5165994 Gura_3838 Geobacter uraniireducens Rf4 NHL repeat-containing protein YP_001232561.1 4482590 R 351605 CDS YP_001232562.1 148265856 5165995 complement(4483898..4484890) 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 4484890 5165995 Gura_3839 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001232562.1 4483898 R 351605 CDS YP_001232563.1 148265857 5165996 complement(4484975..4485970) 1 NC_009483.1 TIGRFAM: cytochrome C family protein; cytochrome C family protein 4485970 5165996 Gura_3840 Geobacter uraniireducens Rf4 cytochrome C family protein YP_001232563.1 4484975 R 351605 CDS YP_001232564.1 148265858 5167025 complement(4486068..4486916) 1 NC_009483.1 PFAM: cytochrome c assembly protein; cytochrome c assembly protein 4486916 5167025 Gura_3841 Geobacter uraniireducens Rf4 cytochrome c assembly protein YP_001232564.1 4486068 R 351605 CDS YP_001232565.1 148265859 5167026 complement(4486989..4488350) 1 NC_009483.1 PFAM: ResB family protein; ResB family protein 4488350 5167026 Gura_3842 Geobacter uraniireducens Rf4 ResB family protein YP_001232565.1 4486989 R 351605 CDS YP_001232566.1 148265860 5167027 complement(4488533..4488805) 1 NC_009483.1 hypothetical protein 4488805 5167027 Gura_3843 Geobacter uraniireducens Rf4 hypothetical protein YP_001232566.1 4488533 R 351605 CDS YP_001232567.1 148265861 5166549 complement(4488933..4489439) 1 NC_009483.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 4489439 5166549 Gura_3844 Geobacter uraniireducens Rf4 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_001232567.1 4488933 R 351605 CDS YP_001232568.1 148265862 5166550 complement(4489495..4490766) 1 NC_009483.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 4490766 5166550 Gura_3845 Geobacter uraniireducens Rf4 phosphoribosylamine--glycine ligase YP_001232568.1 4489495 R 351605 CDS YP_001232569.1 148265863 5166551 complement(4491123..4493984) 1 NC_009483.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: APHP domain protein; YVTN beta-propeller repeat-containing protein 4493984 5166551 Gura_3846 Geobacter uraniireducens Rf4 YVTN beta-propeller repeat-containing protein YP_001232569.1 4491123 R 351605 CDS YP_001232570.1 148265864 5166435 complement(4494327..4495892) 1 NC_009483.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4495892 purH 5166435 purH Geobacter uraniireducens Rf4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_001232570.1 4494327 R 351605 CDS YP_001232571.1 148265865 5166436 complement(4496033..4497316) 1 NC_009483.1 hypothetical protein 4497316 5166436 Gura_3848 Geobacter uraniireducens Rf4 hypothetical protein YP_001232571.1 4496033 R 351605 CDS YP_001232572.1 148265866 5166437 complement(4497303..4498256) 1 NC_009483.1 TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; selenide, water dikinase 4498256 5166437 Gura_3849 Geobacter uraniireducens Rf4 selenide, water dikinase YP_001232572.1 4497303 R 351605 CDS YP_001232573.1 148265867 5166061 complement(4498396..4499550) 1 NC_009483.1 TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 4499550 5166061 Gura_3850 Geobacter uraniireducens Rf4 alanine racemase YP_001232573.1 4498396 R 351605 CDS YP_001232574.1 148265868 5166062 4499863..4501356 1 NC_009483.1 TIGRFAM: thiamine-phosphate pyrophosphorylase; phosphomethylpyrimidine kinase; PFAM: protein of unknown function UPF0031; thiamine monophosphate synthase; Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 4501356 5166062 Gura_3851 Geobacter uraniireducens Rf4 phosphomethylpyrimidine kinase YP_001232574.1 4499863 D 351605 CDS YP_001232575.1 148265869 5167007 4501462..4502769 1 NC_009483.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 4502769 5167007 Gura_3852 Geobacter uraniireducens Rf4 thiamine biosynthesis protein ThiC YP_001232575.1 4501462 D 351605 CDS YP_001232576.1 148265870 5167009 4503160..4503858 1 NC_009483.1 hypothetical protein 4503858 5167009 Gura_3853 Geobacter uraniireducens Rf4 hypothetical protein YP_001232576.1 4503160 D 351605 CDS YP_001232577.1 148265871 5165194 4503902..4506391 1 NC_009483.1 TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35; glycogen/starch/alpha-glucan phosphorylase 4506391 5165194 Gura_3854 Geobacter uraniireducens Rf4 glycogen/starch/alpha-glucan phosphorylase YP_001232577.1 4503902 D 351605 CDS YP_001232578.1 148265872 5165195 complement(4506574..4506735) 1 NC_009483.1 hypothetical protein 4506735 5165195 Gura_3855 Geobacter uraniireducens Rf4 hypothetical protein YP_001232578.1 4506574 R 351605 CDS YP_001232579.1 148265873 5165047 complement(4506786..4507094) 1 NC_009483.1 hypothetical protein 4507094 5165047 Gura_3856 Geobacter uraniireducens Rf4 hypothetical protein YP_001232579.1 4506786 R 351605 CDS YP_001232580.1 148265874 5165048 complement(4507343..4508479) 1 NC_009483.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; cystathionine gamma-synthase 4508479 5165048 Gura_3857 Geobacter uraniireducens Rf4 cystathionine gamma-synthase YP_001232580.1 4507343 R 351605 CDS YP_001232581.1 148265875 5165049 complement(4508614..4509759) 1 NC_009483.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; cystathionine gamma-synthase 4509759 5165049 Gura_3858 Geobacter uraniireducens Rf4 cystathionine gamma-synthase YP_001232581.1 4508614 R 351605 CDS YP_001232582.1 148265876 5166977 complement(4510081..4511010) 1 NC_009483.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; cysteine synthase A 4511010 5166977 Gura_3859 Geobacter uraniireducens Rf4 cysteine synthase A YP_001232582.1 4510081 R 351605 CDS YP_001232583.1 148265877 5166978 complement(4511246..4512865) 1 NC_009483.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 4512865 5166978 Gura_3860 Geobacter uraniireducens Rf4 D-3-phosphoglycerate dehydrogenase YP_001232583.1 4511246 R 351605 CDS YP_001232584.1 148265878 5166979 complement(4512934..4514214) 1 NC_009483.1 PFAM: major facilitator superfamily MFS_1; major facilitator transporter 4514214 5166979 Gura_3861 Geobacter uraniireducens Rf4 major facilitator transporter YP_001232584.1 4512934 R 351605 CDS YP_001232585.1 148265879 5164900 4514839..4515234 1 NC_009483.1 hypothetical protein 4515234 5164900 Gura_3862 Geobacter uraniireducens Rf4 hypothetical protein YP_001232585.1 4514839 D 351605 CDS YP_001232586.1 148265880 5164901 complement(4515374..4515730) 1 NC_009483.1 PFAM: PilT protein domain protein; PilT domain-containing protein 4515730 5164901 Gura_3863 Geobacter uraniireducens Rf4 PilT domain-containing protein YP_001232586.1 4515374 R 351605 CDS YP_001232587.1 148265881 5164902 complement(4515732..4516031) 1 NC_009483.1 hypothetical protein 4516031 5164902 Gura_3864 Geobacter uraniireducens Rf4 hypothetical protein YP_001232587.1 4515732 R 351605 CDS YP_001232588.1 148265882 5166847 complement(4516205..4516585) 1 NC_009483.1 PFAM: PilT protein domain protein; PilT domain-containing protein 4516585 5166847 Gura_3865 Geobacter uraniireducens Rf4 PilT domain-containing protein YP_001232588.1 4516205 R 351605 CDS YP_001232589.1 148265883 5166848 complement(4516586..4516819) 1 NC_009483.1 TIGRFAM: prevent-host-death family protein; prevent-host-death family protein 4516819 5166848 Gura_3866 Geobacter uraniireducens Rf4 prevent-host-death family protein YP_001232589.1 4516586 R 351605 CDS YP_001232590.1 148265884 5166849 4517119..4517547 1 NC_009483.1 SMART: Nucleotide binding protein, PINc; nucleotide binding protein, PINc 4517547 5166849 Gura_3867 Geobacter uraniireducens Rf4 nucleotide binding protein, PINc YP_001232590.1 4517119 D 351605 CDS YP_001232591.1 148265885 5166932 4517544..4517780 1 NC_009483.1 hypothetical protein 4517780 5166932 Gura_3868 Geobacter uraniireducens Rf4 hypothetical protein YP_001232591.1 4517544 D 351605 CDS YP_001232592.1 148265886 5166934 complement(4518408..4518569) 1 NC_009483.1 hypothetical protein 4518569 5166934 Gura_3870 Geobacter uraniireducens Rf4 hypothetical protein YP_001232592.1 4518408 R 351605 CDS YP_001232593.1 148265887 5165294 complement(4518627..4518989) 1 NC_009483.1 hypothetical protein 4518989 5165294 Gura_3871 Geobacter uraniireducens Rf4 hypothetical protein YP_001232593.1 4518627 R 351605 CDS YP_001232594.1 148265888 5165295 complement(4518986..4520743) 1 NC_009483.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4520743 5165295 Gura_3872 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001232594.1 4518986 R 351605 CDS YP_001232595.1 148265889 5165296 complement(4520740..4522611) 1 NC_009483.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4522611 5165296 Gura_3873 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001232595.1 4520740 R 351605 CDS YP_001232596.1 148265890 5166422 complement(4522644..4523675) 1 NC_009483.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; SMART: extracellular solute-binding protein, family 3; aliphatic sulfonate ABC transporter periplasmic ligand-binding protein 4523675 5166422 Gura_3874 Geobacter uraniireducens Rf4 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein YP_001232596.1 4522644 R 351605 CDS YP_001232597.1 148265891 5166423 complement(4524067..4524936) 1 NC_009483.1 PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4524936 5166423 Gura_3875 Geobacter uraniireducens Rf4 binding-protein-dependent transport system inner membrane protein YP_001232597.1 4524067 R 351605 CDS YP_001232598.1 148265892 5166424 complement(4525016..4525909) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4525909 5166424 Gura_3876 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001232598.1 4525016 R 351605 CDS YP_001232599.1 148265893 5166352 complement(4526108..4527295) 1 NC_009483.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; 2-hydroxyglutaryl-CoA dehydratase subunit D 4527295 5166352 Gura_3877 Geobacter uraniireducens Rf4 2-hydroxyglutaryl-CoA dehydratase subunit D YP_001232599.1 4526108 R 351605 CDS YP_001232600.1 148265894 5166353 complement(4527335..4528753) 1 NC_009483.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; 2-hydroxyglutaryl-CoA dehydratase subunit D 4528753 5166353 Gura_3878 Geobacter uraniireducens Rf4 2-hydroxyglutaryl-CoA dehydratase subunit D YP_001232600.1 4527335 R 351605 CDS YP_001232601.1 148265895 5166354 complement(4528823..4529632) 1 NC_009483.1 TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; putative CoA-substrate-specific enzyme activase 4529632 5166354 Gura_3879 Geobacter uraniireducens Rf4 putative CoA-substrate-specific enzyme activase YP_001232601.1 4528823 R 351605 CDS YP_001232602.1 148265896 5166917 4529924..4530265 1 NC_009483.1 hypothetical protein 4530265 5166917 Gura_3880 Geobacter uraniireducens Rf4 hypothetical protein YP_001232602.1 4529924 D 351605 CDS YP_001232603.1 148265897 5166918 4530271..4531647 1 NC_009483.1 hypothetical protein 4531647 5166918 Gura_3881 Geobacter uraniireducens Rf4 hypothetical protein YP_001232603.1 4530271 D 351605 CDS YP_001232604.1 148265898 5166919 complement(4531767..4532546) 1 NC_009483.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4532546 5166919 Gura_3882 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001232604.1 4531767 R 351605 CDS YP_001232605.1 148265899 5166920 complement(4532611..4533399) 1 NC_009483.1 PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4533399 5166920 Gura_3883 Geobacter uraniireducens Rf4 binding-protein-dependent transport system inner membrane protein YP_001232605.1 4532611 R 351605 CDS YP_001232606.1 148265900 5166921 complement(4533533..4534309) 1 NC_009483.1 PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4534309 5166921 Gura_3884 Geobacter uraniireducens Rf4 binding-protein-dependent transport system inner membrane protein YP_001232606.1 4533533 R 351605 CDS YP_001232607.1 148265901 5166922 complement(4534498..4535322) 1 NC_009483.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 4535322 5166922 Gura_3885 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001232607.1 4534498 R 351605 CDS YP_001232608.1 148265902 5165094 complement(4535512..4536636) 1 NC_009483.1 nitrate/sulfonate/bicarbonate ABC transporter periplasmic component-like protein 4536636 5165094 Gura_3886 Geobacter uraniireducens Rf4 nitrate/sulfonate/bicarbonate ABC transporter periplasmic component-like protein YP_001232608.1 4535512 R 351605 CDS YP_001232609.1 148265903 5165095 complement(4536667..4538166) 1 NC_009483.1 PFAM: phosphate-selective porin O and P; phosphate-selective porin O and P 4538166 5165095 Gura_3887 Geobacter uraniireducens Rf4 phosphate-selective porin O and P YP_001232609.1 4536667 R 351605 CDS YP_001232610.1 148265904 5165096 complement(4538466..4539869) 1 NC_009483.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 4539869 5165096 Gura_3888 Geobacter uraniireducens Rf4 RNA-directed DNA polymerase YP_001232610.1 4538466 R 351605 CDS YP_001232611.1 148265905 5165168 complement(4540494..4541360) 1 NC_009483.1 PFAM: NifH/frxC-family protein; nitrogenase 4541360 5165168 Gura_3889 Geobacter uraniireducens Rf4 nitrogenase YP_001232611.1 4540494 R 351605 CDS YP_001232612.1 148265906 5165169 complement(4541506..4541673) 1 NC_009483.1 hypothetical protein 4541673 5165169 Gura_3890 Geobacter uraniireducens Rf4 hypothetical protein YP_001232612.1 4541506 R 351605 CDS YP_001232613.1 148265907 5165170 complement(4541720..4542790) 1 NC_009483.1 TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter ATPase 4542790 5165170 Gura_3891 Geobacter uraniireducens Rf4 sulfate ABC transporter ATPase YP_001232613.1 4541720 R 351605 CDS YP_001232614.1 148265908 5166298 complement(4542818..4543702) 1 NC_009483.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease 4543702 5166298 Gura_3892 Geobacter uraniireducens Rf4 sulfate ABC transporter permease YP_001232614.1 4542818 R 351605 CDS YP_001232615.1 148265909 5166299 complement(4543717..4544553) 1 NC_009483.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease 4544553 5166299 Gura_3893 Geobacter uraniireducens Rf4 sulfate ABC transporter permease YP_001232615.1 4543717 R 351605 CDS YP_001232616.1 148265910 5166300 complement(4544645..4545658) 1 NC_009483.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; sulfate ABC transporter periplasmic sulfate-binding protein 4545658 5166300 Gura_3894 Geobacter uraniireducens Rf4 sulfate ABC transporter periplasmic sulfate-binding protein YP_001232616.1 4544645 R 351605 CDS YP_001232617.1 148265911 5165628 complement(4545731..4546192) 1 NC_009483.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator 4546192 5165628 Gura_3895 Geobacter uraniireducens Rf4 BadM/Rrf2 family transcriptional regulator YP_001232617.1 4545731 R 351605 CDS YP_001232618.1 148265912 5165629 complement(4546260..4546964) 1 NC_009483.1 PFAM: Smr protein/MutS2; Smr protein/MutS2 4546964 5165629 Gura_3896 Geobacter uraniireducens Rf4 Smr protein/MutS2 YP_001232618.1 4546260 R 351605 CDS YP_001232619.1 148265913 5165630 complement(4547059..4547922) 1 NC_009483.1 PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein 4547922 5165630 Gura_3897 Geobacter uraniireducens Rf4 OmpA/MotB domain-containing protein YP_001232619.1 4547059 R 351605 CDS YP_001232620.1 148265914 5166923 4548131..4550077 1 NC_009483.1 PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; type II secretion system protein E 4550077 5166923 Gura_3898 Geobacter uraniireducens Rf4 type II secretion system protein E YP_001232620.1 4548131 D 351605 CDS YP_001232621.1 148265915 5166924 4550081..4550929 1 NC_009483.1 PFAM: HDOD; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 4550929 5166924 Gura_3899 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001232621.1 4550081 D 351605 CDS YP_001232622.1 148265916 5166925 complement(4551042..4551317) 1 NC_009483.1 hypothetical protein 4551317 5166925 Gura_3900 Geobacter uraniireducens Rf4 hypothetical protein YP_001232622.1 4551042 R 351605 CDS YP_001232623.1 148265917 5167069 4551900..4553042 1 NC_009483.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase 4553042 5167069 Gura_3901 Geobacter uraniireducens Rf4 diguanylate cyclase YP_001232623.1 4551900 D 351605 CDS YP_001232624.1 148265918 5167070 complement(4553088..4555766) 1 NC_009483.1 TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2; DNA polymerase I 4555766 5167070 Gura_3902 Geobacter uraniireducens Rf4 DNA polymerase I YP_001232624.1 4553088 R 351605 CDS YP_001232625.1 148265919 5167071 complement(4555763..4555939) 1 NC_009483.1 hypothetical protein 4555939 5167071 Gura_3903 Geobacter uraniireducens Rf4 hypothetical protein YP_001232625.1 4555763 R 351605 CDS YP_001232626.1 148265920 5166622 4556166..4556339 1 NC_009483.1 hypothetical protein 4556339 5166622 Gura_3904 Geobacter uraniireducens Rf4 hypothetical protein YP_001232626.1 4556166 D 351605 CDS YP_001232627.1 148265921 5166623 4556599..4557042 1 NC_009483.1 PFAM: heat shock protein Hsp20; heat shock protein Hsp20 4557042 5166623 Gura_3905 Geobacter uraniireducens Rf4 heat shock protein Hsp20 YP_001232627.1 4556599 D 351605 CDS YP_001232628.1 148265922 5166624 complement(4557115..4558005) 1 NC_009483.1 PFAM: PP-loop domain protein; PP-loop domain-containing protein 4558005 5166624 Gura_3906 Geobacter uraniireducens Rf4 PP-loop domain-containing protein YP_001232628.1 4557115 R 351605 CDS YP_001232629.1 148265923 5164918 complement(4558023..4558946) 1 NC_009483.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; cysteine synthase A 4558946 5164918 Gura_3907 Geobacter uraniireducens Rf4 cysteine synthase A YP_001232629.1 4558023 R 351605 CDS YP_001232630.1 148265924 5164919 complement(4559043..4559507) 1 NC_009483.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator 4559507 5164919 Gura_3908 Geobacter uraniireducens Rf4 BadM/Rrf2 family transcriptional regulator YP_001232630.1 4559043 R 351605 CDS YP_001232631.1 148265925 5164920 complement(4559860..4560270) 1 NC_009483.1 hypothetical protein 4560270 5164920 Gura_3909 Geobacter uraniireducens Rf4 hypothetical protein YP_001232631.1 4559860 R 351605 CDS YP_001232632.1 148265926 5165652 complement(4560379..4560588) 1 NC_009483.1 hypothetical protein 4560588 5165652 Gura_3910 Geobacter uraniireducens Rf4 hypothetical protein YP_001232632.1 4560379 R 351605 CDS YP_001232633.1 148265927 5165653 4560733..4561569 1 NC_009483.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 4561569 dapF 5165653 dapF Geobacter uraniireducens Rf4 diaminopimelate epimerase YP_001232633.1 4560733 D 351605 CDS YP_001232634.1 148265928 5165654 4561660..4562088 1 NC_009483.1 PFAM: histidine triad (HIT) protein; histidine triad (HIT) protein 4562088 5165654 Gura_3912 Geobacter uraniireducens Rf4 histidine triad (HIT) protein YP_001232634.1 4561660 D 351605 CDS YP_001232635.1 148265929 5164306 complement(4562457..4562876) 1 NC_009483.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 4562876 5164306 Gura_3913 Geobacter uraniireducens Rf4 transposase IS200-family protein YP_001232635.1 4562457 R 351605 CDS YP_001232636.1 148265930 5164307 4563176..4564024 1 NC_009483.1 TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease, family 2; apurinic endonuclease Apn1 4564024 5164307 Gura_3914 Geobacter uraniireducens Rf4 apurinic endonuclease Apn1 YP_001232636.1 4563176 D 351605 CDS YP_001232637.1 148265931 5164308 4564317..4564652 1 NC_009483.1 PFAM: protein of unknown function DUF891; hypothetical protein 4564652 5164308 Gura_3915 Geobacter uraniireducens Rf4 hypothetical protein YP_001232637.1 4564317 D 351605 CDS YP_001232638.1 148265932 5167019 4564678..4564998 1 NC_009483.1 putative transcriptional regulator 4564998 5167019 Gura_3916 Geobacter uraniireducens Rf4 putative transcriptional regulator YP_001232638.1 4564678 D 351605 CDS YP_001232639.1 148265933 5167020 4565312..4566526 1 NC_009483.1 PFAM: transposase, mutator type; transposase, mutator type 4566526 5167020 Gura_3917 Geobacter uraniireducens Rf4 transposase, mutator type YP_001232639.1 4565312 D 351605 CDS YP_001232640.1 148265934 5166968 complement(4567505..4568809) 1 NC_009483.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 4568809 5166968 Gura_3919 Geobacter uraniireducens Rf4 RNA-directed DNA polymerase YP_001232640.1 4567505 R 351605 CDS YP_001232641.1 148265935 5166969 4569564..4570067 1 NC_009483.1 PFAM: Rhodanese domain protein; rhodanese domain-containing protein 4570067 5166969 Gura_3920 Geobacter uraniireducens Rf4 rhodanese domain-containing protein YP_001232641.1 4569564 D 351605 CDS YP_001232642.1 148265936 5166970 4570064..4570504 1 NC_009483.1 PFAM: DoxX family protein; DoxX family protein 4570504 5166970 Gura_3921 Geobacter uraniireducens Rf4 DoxX family protein YP_001232642.1 4570064 D 351605 CDS YP_001232643.1 148265937 5165232 4570650..4571237 1 NC_009483.1 PFAM: protein of unknown function DUF205; membrane protein 4571237 5165232 Gura_3922 Geobacter uraniireducens Rf4 membrane protein YP_001232643.1 4570650 D 351605 CDS YP_001232644.1 148265938 5165233 complement(4571391..4572578) 1 NC_009483.1 PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ 4572578 5165233 Gura_3923 Geobacter uraniireducens Rf4 type IV pilus assembly PilZ YP_001232644.1 4571391 R 351605 CDS YP_001232645.1 148265939 5165234 4572749..4573924 1 NC_009483.1 PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 4573924 5165234 Gura_3924 Geobacter uraniireducens Rf4 filamentation induced by cAMP protein fic YP_001232645.1 4572749 D 351605 CDS YP_001232646.1 148265940 5167028 4574440..4574703 1 NC_009483.1 hypothetical protein 4574703 5167028 Gura_3925 Geobacter uraniireducens Rf4 hypothetical protein YP_001232646.1 4574440 D 351605 CDS YP_001232647.1 148265941 5167029 4574757..4575725 1 NC_009483.1 PFAM: protein of unknown function DUF1568; Chromosomal replication initiator, DnaA C-terminal domain; hypothetical protein 4575725 5167029 Gura_3926 Geobacter uraniireducens Rf4 hypothetical protein YP_001232647.1 4574757 D 351605 CDS YP_001232648.1 148265942 5167030 4575972..4576505 1 NC_009483.1 hypothetical protein 4576505 5167030 Gura_3927 Geobacter uraniireducens Rf4 hypothetical protein YP_001232648.1 4575972 D 351605 CDS YP_001232649.1 148265943 5166875 4576502..4577527 1 NC_009483.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 4577527 5166875 Gura_3928 Geobacter uraniireducens Rf4 integrase catalytic subunit YP_001232649.1 4576502 D 351605 CDS YP_001232650.1 148265944 5166876 4578257..4578862 1 NC_009483.1 hypothetical protein 4578862 5166876 Gura_3929 Geobacter uraniireducens Rf4 hypothetical protein YP_001232650.1 4578257 D 351605 CDS YP_001232651.1 148265945 5166877 complement(4578918..4579664) 1 NC_009483.1 hypothetical protein 4579664 5166877 Gura_3930 Geobacter uraniireducens Rf4 hypothetical protein YP_001232651.1 4578918 R 351605 CDS YP_001232652.1 148265946 5166939 4580189..4580566 1 NC_009483.1 PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 4580566 5166939 Gura_3932 Geobacter uraniireducens Rf4 helix-turn-helix domain-containing protein YP_001232652.1 4580189 D 351605 CDS YP_001232653.1 148265947 5166940 complement(4580709..4582388) 1 NC_009483.1 TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; sulfate adenylyltransferase, large subunit 4582388 5166940 Gura_3933 Geobacter uraniireducens Rf4 sulfate adenylyltransferase, large subunit YP_001232653.1 4580709 R 351605 CDS YP_001232654.1 148265948 5165118 complement(4582388..4583326) 1 NC_009483.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 4583326 5165118 Gura_3934 Geobacter uraniireducens Rf4 sulfate adenylyltransferase subunit 2 YP_001232654.1 4582388 R 351605 CDS YP_001232655.1 148265949 5165119 complement(4583394..4584089) 1 NC_009483.1 TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase; adenylylsulfate reductase 4584089 5165119 Gura_3935 Geobacter uraniireducens Rf4 adenylylsulfate reductase YP_001232655.1 4583394 R 351605 CDS YP_001232656.1 148265950 5165120 complement(4584371..4585819) 1 NC_009483.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; anion transporter 4585819 5165120 Gura_3936 Geobacter uraniireducens Rf4 anion transporter YP_001232656.1 4584371 R 351605 CDS YP_001232657.1 148265951 5165121 complement(4585819..4586307) 1 NC_009483.1 hypothetical protein 4586307 5165121 Gura_3937 Geobacter uraniireducens Rf4 hypothetical protein YP_001232657.1 4585819 R 351605 CDS YP_001232658.1 148265952 5165122 complement(4586441..4586860) 1 NC_009483.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 4586860 5165122 Gura_3938 Geobacter uraniireducens Rf4 transposase IS200-family protein YP_001232658.1 4586441 R 351605 CDS YP_001232659.1 148265953 5165053 complement(4587368..4587592) 1 NC_009483.1 redox protein regulator of disulfide bond formation-like protein 4587592 5165053 Gura_3940 Geobacter uraniireducens Rf4 redox protein regulator of disulfide bond formation-like protein YP_001232659.1 4587368 R 351605 CDS YP_001232660.1 148265954 5165054 complement(4587693..4588640) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; nitrite and sulfite reductase 4Fe-4S region 4588640 5165054 Gura_3941 Geobacter uraniireducens Rf4 nitrite and sulfite reductase 4Fe-4S region YP_001232660.1 4587693 R 351605 CDS YP_001232661.1 148265955 5165055 complement(4588758..4589156) 1 NC_009483.1 PFAM: Mov34/MPN/PAD-1 family protein; Mov34/MPN/PAD-1 family protein 4589156 5165055 Gura_3942 Geobacter uraniireducens Rf4 Mov34/MPN/PAD-1 family protein YP_001232661.1 4588758 R 351605 CDS YP_001232662.1 148265956 5166699 complement(4589196..4590008) 1 NC_009483.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; UBA/THIF-type NAD/FAD binding protein 4590008 5166699 Gura_3943 Geobacter uraniireducens Rf4 UBA/THIF-type NAD/FAD binding protein YP_001232662.1 4589196 R 351605 CDS YP_001232663.1 148265957 5166700 complement(4590008..4590223) 1 NC_009483.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; thiamine biosynthesis protein ThiS 4590223 5166700 Gura_3944 Geobacter uraniireducens Rf4 thiamine biosynthesis protein ThiS YP_001232663.1 4590008 R 351605 CDS YP_001232664.1 148265958 5166701 complement(4590241..4591527) 1 NC_009483.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine aminocarboxypropyltransferase 4591527 5166701 Gura_3945 Geobacter uraniireducens Rf4 O-acetylhomoserine aminocarboxypropyltransferase YP_001232664.1 4590241 R 351605 CDS YP_001232665.1 148265959 5165208 complement(4592112..4592603) 1 NC_009483.1 hypothetical protein 4592603 5165208 Gura_3946 Geobacter uraniireducens Rf4 hypothetical protein YP_001232665.1 4592112 R 351605 CDS YP_001232666.1 148265960 5165209 complement(4592608..4593210) 1 NC_009483.1 TIGRFAM: membrane lipoprotein lipid attachment site; membrane lipoprotein lipid attachment site 4593210 5165209 Gura_3947 Geobacter uraniireducens Rf4 membrane lipoprotein lipid attachment site YP_001232666.1 4592608 R 351605 CDS YP_001232667.1 148265961 5165210 complement(4593239..4593691) 1 NC_009483.1 PFAM: protein of unknown function DUF1425; hypothetical protein 4593691 5165210 Gura_3948 Geobacter uraniireducens Rf4 hypothetical protein YP_001232667.1 4593239 R 351605 CDS YP_001232668.1 148265962 5163776 complement(4593828..4595291) 1 NC_009483.1 PFAM: Tetratricopeptide TPR_2 repeat protein; hypothetical protein 4595291 5163776 Gura_3949 Geobacter uraniireducens Rf4 hypothetical protein YP_001232668.1 4593828 R 351605 CDS YP_001232669.1 148265963 5163777 complement(4595376..4596218) 1 NC_009483.1 TIGRFAM: RNA polymerase sigma factor RpoH; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma-32 subunit RpoH 4596218 5163777 Gura_3950 Geobacter uraniireducens Rf4 RNA polymerase sigma-32 subunit RpoH YP_001232669.1 4595376 R 351605 CDS YP_001232670.1 148265964 5163778 4596503..4597576 1 NC_009483.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 4597576 5163778 Gura_3951 Geobacter uraniireducens Rf4 branched-chain amino acid aminotransferase YP_001232670.1 4596503 D 351605 CDS YP_001232671.1 148265965 5165739 4597639..4597791 1 NC_009483.1 hypothetical protein 4597791 5165739 Gura_3952 Geobacter uraniireducens Rf4 hypothetical protein YP_001232671.1 4597639 D 351605 CDS YP_001232672.1 148265966 5165740 4597804..4598022 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4598022 5165740 Gura_3953 Geobacter uraniireducens Rf4 4Fe-4S ferredoxin YP_001232672.1 4597804 D 351605 CDS YP_001232673.1 148265967 5165741 4598047..4598355 1 NC_009483.1 hypothetical protein 4598355 5165741 Gura_3954 Geobacter uraniireducens Rf4 hypothetical protein YP_001232673.1 4598047 D 351605 CDS YP_001232674.1 148265968 5164983 4598731..4601325 1 NC_009483.1 PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATPase 4601325 5164983 Gura_3955 Geobacter uraniireducens Rf4 ATPase YP_001232674.1 4598731 D 351605 CDS YP_001232675.1 148265969 5164984 complement(4601562..4601801) 1 NC_009483.1 hypothetical protein 4601801 5164984 Gura_3956 Geobacter uraniireducens Rf4 hypothetical protein YP_001232675.1 4601562 R 351605 CDS YP_001232676.1 148265970 5164985 complement(4601910..4602179) 1 NC_009483.1 hypothetical protein 4602179 5164985 Gura_3957 Geobacter uraniireducens Rf4 hypothetical protein YP_001232676.1 4601910 R 351605 CDS YP_001232677.1 148265971 5162688 complement(4602253..4602735) 1 NC_009483.1 hypothetical protein 4602735 5162688 Gura_3958 Geobacter uraniireducens Rf4 hypothetical protein YP_001232677.1 4602253 R 351605 CDS YP_001232678.1 148265972 5162689 4602964..4603620 1 NC_009483.1 PFAM: ThiJ/PfpI domain protein; isoprenoid biosynthesis protein with amidotransferase-like domain 4603620 5162689 Gura_3959 Geobacter uraniireducens Rf4 isoprenoid biosynthesis protein with amidotransferase-like domain YP_001232678.1 4602964 D 351605 CDS YP_001232679.1 148265973 5162690 4603755..4604384 1 NC_009483.1 hypothetical protein 4604384 5162690 Gura_3960 Geobacter uraniireducens Rf4 hypothetical protein YP_001232679.1 4603755 D 351605 CDS YP_001232680.1 148265974 5164544 complement(4604393..4606093) 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 4606093 5164544 Gura_3961 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001232680.1 4604393 R 351605 CDS YP_001232681.1 148265975 5164545 complement(4606234..4607331) 1 NC_009483.1 PFAM: protein of unknown function DUF1016; hypothetical protein 4607331 5164545 Gura_3962 Geobacter uraniireducens Rf4 hypothetical protein YP_001232681.1 4606234 R 351605 CDS YP_001232682.1 148265976 5163863 complement(4608085..4608726) 1 NC_009483.1 putative transcriptional regulator 4608726 5163863 Gura_3965 Geobacter uraniireducens Rf4 putative transcriptional regulator YP_001232682.1 4608085 R 351605 CDS YP_001232683.1 148265977 5163864 complement(4608821..4609138) 1 NC_009483.1 hypothetical protein 4609138 5163864 Gura_3966 Geobacter uraniireducens Rf4 hypothetical protein YP_001232683.1 4608821 R 351605 CDS YP_001232684.1 148265978 5163475 complement(4609291..4610148) 1 NC_009483.1 hypothetical protein 4610148 5163475 Gura_3967 Geobacter uraniireducens Rf4 hypothetical protein YP_001232684.1 4609291 R 351605 CDS YP_001232685.1 148265979 5163476 complement(4610598..4611749) 1 NC_009483.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 4611749 5163476 Gura_3968 Geobacter uraniireducens Rf4 cell division protein FtsZ YP_001232685.1 4610598 R 351605 CDS YP_001232686.1 148265980 5163477 complement(4611805..4613040) 1 NC_009483.1 PFAM: cell division protein FtsA; cell division protein FtsA 4613040 5163477 Gura_3969 Geobacter uraniireducens Rf4 cell division protein FtsA YP_001232686.1 4611805 R 351605 CDS YP_001232687.1 148265981 5162798 complement(4613100..4613927) 1 NC_009483.1 PFAM: Polypeptide-transport-associated protein domain protein, FtsQ-type; polypeptide-transport-associated domain-containing protein 4613927 5162798 Gura_3970 Geobacter uraniireducens Rf4 polypeptide-transport-associated domain-containing protein YP_001232687.1 4613100 R 351605 CDS YP_001232688.1 148265982 5162799 complement(4614030..4614962) 1 NC_009483.1 TIGRFAM: D-alanine--D-alanine ligase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase 4614962 5162799 Gura_3971 Geobacter uraniireducens Rf4 D-alanine--D-alanine ligase YP_001232688.1 4614030 R 351605 CDS YP_001232689.1 148265983 5162800 complement(4615052..4615954) 1 NC_009483.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 4615954 murB 5162800 murB Geobacter uraniireducens Rf4 UDP-N-acetylenolpyruvoylglucosamine reductase YP_001232689.1 4615052 R 351605 CDS YP_001232690.1 148265984 5163096 complement(4615951..4617327) 1 NC_009483.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 4617327 murC 5163096 murC Geobacter uraniireducens Rf4 UDP-N-acetylmuramate--L-alanine ligase YP_001232690.1 4615951 R 351605 CDS YP_001232691.1 148265985 5163097 complement(4617312..4618409) 1 NC_009483.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 4618409 murG 5163097 murG Geobacter uraniireducens Rf4 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_001232691.1 4617312 R 351605 CDS YP_001232692.1 148265986 5163098 complement(4618406..4619485) 1 NC_009483.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; cell division protein FtsW 4619485 5163098 Gura_3975 Geobacter uraniireducens Rf4 cell division protein FtsW YP_001232692.1 4618406 R 351605 CDS YP_001232693.1 148265987 5166122 complement(4619506..4620867) 1 NC_009483.1 TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; UDP-N-acetylmuramoylalanine--D-glutamate ligase 4620867 5166122 Gura_3976 Geobacter uraniireducens Rf4 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_001232693.1 4619506 R 351605 CDS YP_001232694.1 148265988 5166123 complement(4620969..4622045) 1 NC_009483.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 4622045 mraY 5166123 mraY Geobacter uraniireducens Rf4 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001232694.1 4620969 R 351605 CDS YP_001232695.1 148265989 5166124 complement(4622045..4623451) 1 NC_009483.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 4623451 5166124 Gura_3978 Geobacter uraniireducens Rf4 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase YP_001232695.1 4622045 R 351605 CDS YP_001232696.1 148265990 5165925 complement(4623481..4625001) 1 NC_009483.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 4625001 murE 5165925 murE Geobacter uraniireducens Rf4 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_001232696.1 4623481 R 351605 CDS YP_001232697.1 148265991 5165926 complement(4625054..4627027) 1 NC_009483.1 PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PASTA domain containing protein; peptidoglycan glycosyltransferase 4627027 5165926 Gura_3980 Geobacter uraniireducens Rf4 peptidoglycan glycosyltransferase YP_001232697.1 4625054 R 351605 CDS YP_001232698.1 148265992 5165927 complement(4627024..4627359) 1 NC_009483.1 TIGRFAM: cell division protein FtsL; PFAM: Septum formation initiator; cell division protein FtsL 4627359 5165927 Gura_3981 Geobacter uraniireducens Rf4 cell division protein FtsL YP_001232698.1 4627024 R 351605 CDS YP_001232699.1 148265993 5167004 complement(4627379..4628290) 1 NC_009483.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; S-adenosyl-methyltransferase MraW 4628290 mraW 5167004 mraW Geobacter uraniireducens Rf4 S-adenosyl-methyltransferase MraW YP_001232699.1 4627379 R 351605 CDS YP_001232700.1 148265994 5167005 complement(4628318..4628800) 1 NC_009483.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 4628800 5167005 Gura_3983 Geobacter uraniireducens Rf4 cell division protein MraZ YP_001232700.1 4628318 R 351605 CDS YP_001232701.1 148265995 5167006 complement(4629095..4629430) 1 NC_009483.1 hypothetical protein 4629430 5167006 Gura_3984 Geobacter uraniireducens Rf4 hypothetical protein YP_001232701.1 4629095 R 351605 CDS YP_001232702.1 148265996 5164839 complement(4629479..4630006) 1 NC_009483.1 hypothetical protein 4630006 5164839 Gura_3985 Geobacter uraniireducens Rf4 hypothetical protein YP_001232702.1 4629479 R 351605 CDS YP_001232703.1 148265997 5164840 complement(4630080..4630790) 1 NC_009483.1 PFAM: response regulator receiver; type IV pilus assembly PilZ; response regulator receiver modulated PilZ sensor protein 4630790 5164840 Gura_3986 Geobacter uraniireducens Rf4 response regulator receiver modulated PilZ sensor protein YP_001232703.1 4630080 R 351605 CDS YP_001232704.1 148265998 5164792 complement(4631426..4632142) 1 NC_009483.1 PFAM: protein of unknown function DUF164; hypothetical protein 4632142 5164792 Gura_3987 Geobacter uraniireducens Rf4 hypothetical protein YP_001232704.1 4631426 R 351605 CDS YP_001232705.1 148265999 5164793 complement(4632191..4633309) 1 NC_009483.1 PFAM: protein of unknown function DUF34; hypothetical protein 4633309 5164793 Gura_3988 Geobacter uraniireducens Rf4 hypothetical protein YP_001232705.1 4632191 R 351605 CDS YP_001232706.1 148266000 5164281 complement(4633635..4641221) 1 NC_009483.1 TIGRFAM: conserved repeat domain; PFAM: APHP domain protein; FG-GAP repeat protein; hypothetical protein 4641221 5164281 Gura_3989 Geobacter uraniireducens Rf4 hypothetical protein YP_001232706.1 4633635 R 351605 CDS YP_001232707.1 148266001 5163385 complement(4641294..4641839) 1 NC_009483.1 PFAM: peptidase M23B; peptidase M23B 4641839 5163385 Gura_3990 Geobacter uraniireducens Rf4 peptidase M23B YP_001232707.1 4641294 R 351605 CDS YP_001232708.1 148266002 5163386 complement(4641874..4643013) 1 NC_009483.1 hypothetical protein 4643013 5163386 Gura_3991 Geobacter uraniireducens Rf4 hypothetical protein YP_001232708.1 4641874 R 351605 CDS YP_001232709.1 148266003 5163387 complement(4643014..4646181) 1 NC_009483.1 hypothetical protein 4646181 5163387 Gura_3992 Geobacter uraniireducens Rf4 hypothetical protein YP_001232709.1 4643014 R 351605 CDS YP_001232710.1 148266004 5163355 4646750..4647175 1 NC_009483.1 hypothetical protein 4647175 5163355 Gura_3993 Geobacter uraniireducens Rf4 hypothetical protein YP_001232710.1 4646750 D 351605 CDS YP_001232711.1 148266005 5163356 complement(4647198..4648325) 1 NC_009483.1 PFAM: putative RNA methylase; THUMP domain protein; putative RNA methylase 4648325 5163356 Gura_3994 Geobacter uraniireducens Rf4 putative RNA methylase YP_001232711.1 4647198 R 351605 CDS YP_001232712.1 148266006 5163357 complement(4648727..4649059) 1 NC_009483.1 hypothetical protein 4649059 5163357 Gura_3995 Geobacter uraniireducens Rf4 hypothetical protein YP_001232712.1 4648727 R 351605 CDS YP_001232713.1 148266007 5166992 complement(4649062..4649832) 1 NC_009483.1 hypothetical protein 4649832 5166992 Gura_3996 Geobacter uraniireducens Rf4 hypothetical protein YP_001232713.1 4649062 R 351605 CDS YP_001232714.1 148266008 5166993 complement(4649811..4650608) 1 NC_009483.1 hypothetical protein 4650608 5166993 Gura_3997 Geobacter uraniireducens Rf4 hypothetical protein YP_001232714.1 4649811 R 351605 CDS YP_001232715.1 148266009 5166994 4650861..4652024 1 NC_009483.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 4652024 sucC 5166994 sucC Geobacter uraniireducens Rf4 succinyl-CoA synthetase subunit beta YP_001232715.1 4650861 D 351605 CDS YP_001232716.1 148266010 5166088 4652231..4653124 1 NC_009483.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit alpha 4653124 5166088 Gura_3999 Geobacter uraniireducens Rf4 succinyl-CoA synthetase subunit alpha YP_001232716.1 4652231 D 351605 CDS YP_001232717.1 148266011 5166089 complement(4653135..4654442) 1 NC_009483.1 PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; nitrite and sulfite reductase 4Fe-4S region 4654442 5166089 Gura_4000 Geobacter uraniireducens Rf4 nitrite and sulfite reductase 4Fe-4S region YP_001232717.1 4653135 R 351605 CDS YP_001232718.1 148266012 5166090 4654596..4654928 1 NC_009483.1 hypothetical protein 4654928 5166090 Gura_4001 Geobacter uraniireducens Rf4 hypothetical protein YP_001232718.1 4654596 D 351605 CDS YP_001232719.1 148266013 5164705 4654925..4655302 1 NC_009483.1 hypothetical protein 4655302 5164705 Gura_4002 Geobacter uraniireducens Rf4 hypothetical protein YP_001232719.1 4654925 D 351605 CDS YP_001232720.1 148266014 5164706 complement(4655408..4655944) 1 NC_009483.1 hypothetical protein 4655944 5164706 Gura_4003 Geobacter uraniireducens Rf4 hypothetical protein YP_001232720.1 4655408 R 351605 CDS YP_001232721.1 148266015 5164707 4656597..4658207 1 NC_009483.1 formate-dependent nitrite reductase periplasmic cytochrome c552 subunit-like protein 4658207 5164707 Gura_4004 Geobacter uraniireducens Rf4 formate-dependent nitrite reductase periplasmic cytochrome c552 subunit-like protein YP_001232721.1 4656597 D 351605 CDS YP_001232722.1 148266016 5164051 4658396..4659712 1 NC_009483.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor 4659712 5164051 Gura_4005 Geobacter uraniireducens Rf4 response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor YP_001232722.1 4658396 D 351605 CDS YP_001232723.1 148266017 5164052 complement(4659934..4660335) 1 NC_009483.1 hypothetical protein 4660335 5164052 Gura_4006 Geobacter uraniireducens Rf4 hypothetical protein YP_001232723.1 4659934 R 351605 CDS YP_001232724.1 148266018 5164053 complement(4660335..4661084) 1 NC_009483.1 DNA uptake lipoprotein-like protein 4661084 5164053 Gura_4007 Geobacter uraniireducens Rf4 DNA uptake lipoprotein-like protein YP_001232724.1 4660335 R 351605 CDS YP_001232725.1 148266019 5166953 complement(4661256..4663055) 1 NC_009483.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; GTP-binding protein TypA 4663055 5166953 Gura_4008 Geobacter uraniireducens Rf4 GTP-binding protein TypA YP_001232725.1 4661256 R 351605 CDS YP_001232726.1 148266020 5166954 complement(4663192..4663917) 1 NC_009483.1 hypothetical protein 4663917 5166954 Gura_4009 Geobacter uraniireducens Rf4 hypothetical protein YP_001232726.1 4663192 R 351605 CDS YP_001232727.1 148266021 5166955 complement(4664010..4665533) 1 NC_009483.1 PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase, catalytic; lytic transglycosylase 4665533 5166955 Gura_4010 Geobacter uraniireducens Rf4 lytic transglycosylase YP_001232727.1 4664010 R 351605 CDS YP_001232728.1 148266022 5164410 complement(4666133..4667260) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF362; hypothetical protein 4667260 5164410 Gura_4011 Geobacter uraniireducens Rf4 hypothetical protein YP_001232728.1 4666133 R 351605 CDS YP_001232729.1 148266023 5164411 4667330..4668214 1 NC_009483.1 TIGRFAM: tyrosine recombinase XerC; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; tyrosine recombinase XerC 4668214 5164411 Gura_4012 Geobacter uraniireducens Rf4 tyrosine recombinase XerC YP_001232729.1 4667330 D 351605 CDS YP_001232730.1 148266024 5164412 4668300..4668731 1 NC_009483.1 hypothetical protein 4668731 5164412 Gura_4013 Geobacter uraniireducens Rf4 hypothetical protein YP_001232730.1 4668300 D 351605 CDS YP_001232731.1 148266025 5163871 4668813..4669271 1 NC_009483.1 PFAM: protein of unknown function DUF188; hypothetical protein 4669271 5163871 Gura_4014 Geobacter uraniireducens Rf4 hypothetical protein YP_001232731.1 4668813 D 351605 CDS YP_001232732.1 148266026 5163872 4669359..4669904 1 NC_009483.1 PFAM: YaeQ family protein; YaeQ family protein 4669904 5163872 Gura_4015 Geobacter uraniireducens Rf4 YaeQ family protein YP_001232732.1 4669359 D 351605 CDS YP_001232733.1 148266027 5163873 4670033..4670236 1 NC_009483.1 hypothetical protein 4670236 5163873 Gura_4016 Geobacter uraniireducens Rf4 hypothetical protein YP_001232733.1 4670033 D 351605 CDS YP_001232734.1 148266028 5166637 4670282..4670680 1 NC_009483.1 PFAM: CoA-binding domain protein; CoA-binding domain-containing protein 4670680 5166637 Gura_4017 Geobacter uraniireducens Rf4 CoA-binding domain-containing protein YP_001232734.1 4670282 D 351605 CDS YP_001232735.1 148266029 5166638 complement(4670705..4672846) 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; methyl-accepting chemotaxis sensory transducer 4672846 5166638 Gura_4018 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001232735.1 4670705 R 351605 CDS YP_001232736.1 148266030 5166639 4673132..4673332 1 NC_009483.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 4673332 5166639 Gura_4019 Geobacter uraniireducens Rf4 cold-shock DNA-binding domain-containing protein YP_001232736.1 4673132 D 351605 CDS YP_001232737.1 148266031 5167043 complement(4673650..4673850) 1 NC_009483.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 4673850 5167043 Gura_4020 Geobacter uraniireducens Rf4 cold-shock DNA-binding domain-containing protein YP_001232737.1 4673650 R 351605 CDS YP_001232738.1 148266032 5167044 complement(4673961..4674791) 1 NC_009483.1 hypothetical protein 4674791 5167044 Gura_4021 Geobacter uraniireducens Rf4 hypothetical protein YP_001232738.1 4673961 R 351605 CDS YP_001232739.1 148266033 5167045 complement(4674992..4675246) 1 NC_009483.1 hypothetical protein 4675246 5167045 Gura_4022 Geobacter uraniireducens Rf4 hypothetical protein YP_001232739.1 4674992 R 351605 CDS YP_001232740.1 148266034 5163508 4675496..4676095 1 NC_009483.1 hypothetical protein 4676095 5163508 Gura_4023 Geobacter uraniireducens Rf4 hypothetical protein YP_001232740.1 4675496 D 351605 CDS YP_001232741.1 148266035 5163509 4676319..4676675 1 NC_009483.1 hypothetical protein 4676675 5163509 Gura_4024 Geobacter uraniireducens Rf4 hypothetical protein YP_001232741.1 4676319 D 351605 CDS YP_001232742.1 148266036 5163510 complement(4676738..4678369) 1 NC_009483.1 PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4678369 5163510 Gura_4025 Geobacter uraniireducens Rf4 ABC transporter-like protein YP_001232742.1 4676738 R 351605 CDS YP_001232743.1 148266037 5163259 complement(4678548..4679186) 1 NC_009483.1 PFAM: outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 4679186 5163259 Gura_4026 Geobacter uraniireducens Rf4 outer membrane chaperone Skp YP_001232743.1 4678548 R 351605 CDS YP_001232744.1 148266038 5163260 4679359..4680399 1 NC_009483.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; response regulator receiver modulated metal dependent phosphohydrolase 4680399 5163260 Gura_4027 Geobacter uraniireducens Rf4 response regulator receiver modulated metal dependent phosphohydrolase YP_001232744.1 4679359 D 351605 CDS YP_001232745.1 148266039 5163261 complement(4680584..4681675) 1 NC_009483.1 phosphotransacetylase domain-containing protein 4681675 5163261 Gura_4028 Geobacter uraniireducens Rf4 phosphotransacetylase domain-containing protein YP_001232745.1 4680584 R 351605 CDS YP_001232746.1 148266040 5166841 complement(4681938..4683533) 1 NC_009483.1 PFAM: acetyl-CoA hydrolase/transferase; acetyl-CoA hydrolase 4683533 5166841 Gura_4029 Geobacter uraniireducens Rf4 acetyl-CoA hydrolase YP_001232746.1 4681938 R 351605 CDS YP_001232747.1 148266041 5166842 4684146..4684796 1 NC_009483.1 PFAM: response regulator receiver; histidine kinase A domain protein; response regulator receiver protein 4684796 5166842 Gura_4030 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001232747.1 4684146 D 351605 CDS YP_001232748.1 148266042 5166843 complement(4684864..4686393) 1 NC_009483.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI 4686393 5166843 Gura_4031 Geobacter uraniireducens Rf4 Mg chelatase subunit ChlI YP_001232748.1 4684864 R 351605 CDS YP_001232749.1 148266043 5163808 complement(4686443..4687393) 1 NC_009483.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 4687393 5163808 Gura_4032 Geobacter uraniireducens Rf4 thioredoxin reductase YP_001232749.1 4686443 R 351605 CDS YP_001232750.1 148266044 5163809 4687545..4688297 1 NC_009483.1 hypothetical protein 4688297 5163809 Gura_4033 Geobacter uraniireducens Rf4 hypothetical protein YP_001232750.1 4687545 D 351605 CDS YP_001232751.1 148266045 5163810 4688361..4689341 1 NC_009483.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter 4689341 5163810 Gura_4034 Geobacter uraniireducens Rf4 cation diffusion facilitator family transporter YP_001232751.1 4688361 D 351605 CDS YP_001232752.1 148266046 5166250 4689369..4690577 1 NC_009483.1 catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase 4690577 5166250 Gura_4035 Geobacter uraniireducens Rf4 threonine dehydratase YP_001232752.1 4689369 D 351605 CDS YP_001232753.1 148266047 5166251 complement(4691017..4691721) 1 NC_009483.1 PFAM: protein of unknown function DUF45; hypothetical protein 4691721 5166251 Gura_4036 Geobacter uraniireducens Rf4 hypothetical protein YP_001232753.1 4691017 R 351605 CDS YP_001232754.1 148266048 5166252 complement(4691718..4694972) 1 NC_009483.1 TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; HsdR family type I site-specific deoxyribonuclease 4694972 5166252 Gura_4037 Geobacter uraniireducens Rf4 HsdR family type I site-specific deoxyribonuclease YP_001232754.1 4691718 R 351605 CDS YP_001232755.1 148266049 5164070 complement(4695001..4695507) 1 NC_009483.1 hypothetical protein 4695507 5164070 Gura_4038 Geobacter uraniireducens Rf4 hypothetical protein YP_001232755.1 4695001 R 351605 CDS YP_001232756.1 148266050 5164071 complement(4695504..4696574) 1 NC_009483.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; helix-turn-helix domain-containing protein 4696574 5164071 Gura_4039 Geobacter uraniireducens Rf4 helix-turn-helix domain-containing protein YP_001232756.1 4695504 R 351605 CDS YP_001232757.1 148266051 5164072 complement(4696924..4698345) 1 NC_009483.1 hypothetical protein 4698345 5164072 Gura_4040 Geobacter uraniireducens Rf4 hypothetical protein YP_001232757.1 4696924 R 351605 CDS YP_001232758.1 148266052 5165928 complement(4698342..4700081) 1 NC_009483.1 hypothetical protein 4700081 5165928 Gura_4041 Geobacter uraniireducens Rf4 hypothetical protein YP_001232758.1 4698342 R 351605 CDS YP_001232759.1 148266053 5165929 complement(4700105..4701391) 1 NC_009483.1 PFAM: restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit 4701391 5165929 Gura_4042 Geobacter uraniireducens Rf4 restriction modification system DNA specificity subunit YP_001232759.1 4700105 R 351605 CDS YP_001232760.1 148266054 5165930 complement(4701384..4703858) 1 NC_009483.1 PFAM: N-6 DNA methylase; N-6 DNA methylase 4703858 5165930 Gura_4043 Geobacter uraniireducens Rf4 N-6 DNA methylase YP_001232760.1 4701384 R 351605 CDS YP_001232761.1 148266055 5166194 complement(4704003..4704686) 1 NC_009483.1 hypothetical protein 4704686 5166194 Gura_4044 Geobacter uraniireducens Rf4 hypothetical protein YP_001232761.1 4704003 R 351605 CDS YP_001232762.1 148266056 5166195 complement(4704723..4705580) 1 NC_009483.1 similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; putative GTP cyclohydrolase 4705580 5166195 Gura_4045 Geobacter uraniireducens Rf4 putative GTP cyclohydrolase YP_001232762.1 4704723 R 351605 CDS YP_001232763.1 148266057 5166196 complement(4705592..4706278) 1 NC_009483.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; exsB protein 4706278 5166196 Gura_4046 Geobacter uraniireducens Rf4 exsB protein YP_001232763.1 4705592 R 351605 CDS YP_001232764.1 148266058 5166826 complement(4706383..4708143) 1 NC_009483.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor RpoD domain protein; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; RpoD family RNA polymerase sigma factor 4708143 5166826 Gura_4047 Geobacter uraniireducens Rf4 RpoD family RNA polymerase sigma factor YP_001232764.1 4706383 R 351605 CDS YP_001232765.1 148266059 5166827 complement(4708171..4709934) 1 NC_009483.1 TIGRFAM: DNA primase; PFAM: zinc finger, CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core, N-terminal domain; SMART: Toprim sub domain protein; DNA primase 4709934 5166827 Gura_4048 Geobacter uraniireducens Rf4 DNA primase YP_001232765.1 4708171 R 351605 CDS YP_001232766.1 148266060 5166828 complement(4709960..4710469) 1 NC_009483.1 PFAM: Colicin V production protein; colicin V production protein 4710469 5166828 Gura_4049 Geobacter uraniireducens Rf4 colicin V production protein YP_001232766.1 4709960 R 351605 CDS YP_001232767.1 148266061 5162760 complement(4710581..4711024) 1 NC_009483.1 PFAM: GatB/Yqey domain protein; GatB/Yqey domain-containing protein 4711024 5162760 Gura_4050 Geobacter uraniireducens Rf4 GatB/Yqey domain-containing protein YP_001232767.1 4710581 R 351605 CDS YP_001232768.1 148266062 5162761 complement(4711035..4711232) 1 NC_009483.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 4711232 rpsU 5162761 rpsU Geobacter uraniireducens Rf4 30S ribosomal protein S21 YP_001232768.1 4711035 R 351605 CDS YP_001232769.1 148266063 5162762 complement(4711369..4711692) 1 NC_009483.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 4711692 hisE 5162762 hisE Geobacter uraniireducens Rf4 phosphoribosyl-ATP pyrophosphatase YP_001232769.1 4711369 R 351605 CDS YP_001232770.1 148266064 5163003 complement(4711792..4712553) 1 NC_009483.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 4712553 5163003 Gura_4053 Geobacter uraniireducens Rf4 imidazole glycerol phosphate synthase subunit HisF YP_001232770.1 4711792 R 351605 CDS YP_001232771.1 148266065 5163004 complement(4712594..4713331) 1 NC_009483.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 4713331 5163004 Gura_4054 Geobacter uraniireducens Rf4 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_001232771.1 4712594 R 351605 CDS YP_001232772.1 148266066 5163005 complement(4713400..4714026) 1 NC_009483.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 4714026 hisH 5163005 hisH Geobacter uraniireducens Rf4 imidazole glycerol phosphate synthase subunit HisH YP_001232772.1 4713400 R 351605 CDS YP_001232773.1 148266067 5165554 complement(4714061..4714648) 1 NC_009483.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 4714648 hisB 5165554 hisB Geobacter uraniireducens Rf4 imidazoleglycerol-phosphate dehydratase YP_001232773.1 4714061 R 351605 CDS YP_001232774.1 148266068 5165555 complement(4714664..4715953) 1 NC_009483.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 4715953 hisD 5165555 hisD Geobacter uraniireducens Rf4 histidinol dehydrogenase YP_001232774.1 4714664 R 351605 CDS YP_001232775.1 148266069 5165556 complement(4716033..4716737) 1 NC_009483.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 4716737 hisG 5165556 hisG Geobacter uraniireducens Rf4 ATP phosphoribosyltransferase catalytic subunit YP_001232775.1 4716033 R 351605 CDS YP_001232776.1 148266070 5164741 complement(4716758..4718011) 1 NC_009483.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 4718011 5164741 Gura_4059 Geobacter uraniireducens Rf4 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001232776.1 4716758 R 351605 CDS YP_001232777.1 148266071 5164742 complement(4718095..4718949) 1 NC_009483.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; Methyltransferase type 12; HemK family modification methylase 4718949 5164742 Gura_4060 Geobacter uraniireducens Rf4 HemK family modification methylase YP_001232777.1 4718095 R 351605 CDS YP_001232778.1 148266072 5164743 complement(4719005..4720072) 1 NC_009483.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 4720072 prfA 5164743 prfA Geobacter uraniireducens Rf4 peptide chain release factor 1 YP_001232778.1 4719005 R 351605 CDS YP_001232779.1 148266073 5165438 complement(4720168..4721082) 1 NC_009483.1 PFAM: protein of unknown function DUF1385; hypothetical protein 4721082 5165438 Gura_4062 Geobacter uraniireducens Rf4 hypothetical protein YP_001232779.1 4720168 R 351605 CDS YP_001232780.1 148266074 5165439 complement(4721128..4721817) 1 NC_009483.1 flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase 4721817 thyX 5165439 thyX Geobacter uraniireducens Rf4 FAD-dependent thymidylate synthase YP_001232780.1 4721128 R 351605 CDS YP_001232781.1 148266075 5165440 complement(4722053..4722250) 1 NC_009483.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 4722250 rpmE 5165440 rpmE Geobacter uraniireducens Rf4 50S ribosomal protein L31 YP_001232781.1 4722053 R 351605 CDS YP_001232782.1 148266076 5165085 complement(4722351..4723598) 1 NC_009483.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 4723598 rho 5165085 rho Geobacter uraniireducens Rf4 transcription termination factor Rho YP_001232782.1 4722351 R 351605 CDS YP_001232783.1 148266077 5165086 4723992..4726001 1 NC_009483.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase (quinone) 4726001 5165086 Gura_4066 Geobacter uraniireducens Rf4 NADH dehydrogenase (quinone) YP_001232783.1 4723992 D 351605 CDS YP_001232784.1 148266078 5165087 complement(4725981..4726364) 1 NC_009483.1 PFAM: Class I peptide chain release factor; class I peptide chain release factor 4726364 5165087 Gura_4067 Geobacter uraniireducens Rf4 class I peptide chain release factor YP_001232784.1 4725981 R 351605 CDS YP_001232785.1 148266079 5163010 4726989..4728401 1 NC_009483.1 cytochrome c peroxidase-like protein 4728401 5163010 Gura_4069 Geobacter uraniireducens Rf4 cytochrome c peroxidase-like protein YP_001232785.1 4726989 D 351605 CDS YP_001232786.1 148266080 5163011 complement(4728503..4728940) 1 NC_009483.1 PFAM: protein of unknown function DUF606; hypothetical protein 4728940 5163011 Gura_4070 Geobacter uraniireducens Rf4 hypothetical protein YP_001232786.1 4728503 R 351605 CDS YP_001232787.1 148266081 5162994 complement(4729124..4729792) 1 NC_009483.1 hypothetical protein 4729792 5162994 Gura_4071 Geobacter uraniireducens Rf4 hypothetical protein YP_001232787.1 4729124 R 351605 CDS YP_001232788.1 148266082 5162995 complement(4729886..4730365) 1 NC_009483.1 hypothetical protein 4730365 5162995 Gura_4072 Geobacter uraniireducens Rf4 hypothetical protein YP_001232788.1 4729886 R 351605 CDS YP_001232789.1 148266083 5162996 complement(4730401..4730934) 1 NC_009483.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 4730934 5162996 Gura_4073 Geobacter uraniireducens Rf4 methionine-R-sulfoxide reductase YP_001232789.1 4730401 R 351605 CDS YP_001232790.1 148266084 5164434 complement(4731292..4731807) 1 NC_009483.1 hypothetical protein 4731807 5164434 Gura_4074 Geobacter uraniireducens Rf4 hypothetical protein YP_001232790.1 4731292 R 351605 CDS YP_001232791.1 148266085 5164435 4732039..4732410 1 NC_009483.1 hypothetical protein 4732410 5164435 Gura_4075 Geobacter uraniireducens Rf4 hypothetical protein YP_001232791.1 4732039 D 351605 CDS YP_001232792.1 148266086 5164436 complement(4732465..4733343) 1 NC_009483.1 PFAM: Peptidoglycan-binding LysM; ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 4733343 5164436 Gura_4076 Geobacter uraniireducens Rf4 ErfK/YbiS/YcfS/YnhG family protein YP_001232792.1 4732465 R 351605 CDS YP_001232793.1 148266087 5162870 4733443..4734114 1 NC_009483.1 PFAM: O-methyltransferase, family 3; O-methyltransferase family protein 4734114 5162870 Gura_4077 Geobacter uraniireducens Rf4 O-methyltransferase family protein YP_001232793.1 4733443 D 351605 CDS YP_001232794.1 148266088 5162871 4734421..4734678 1 NC_009483.1 PFAM: flagellar FlbD family protein; flagellar FlbD family protein 4734678 5162871 Gura_4078 Geobacter uraniireducens Rf4 flagellar FlbD family protein YP_001232794.1 4734421 D 351605 CDS YP_001232795.1 148266089 5162872 4734713..4735483 1 NC_009483.1 PFAM: MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 4735483 5162872 Gura_4079 Geobacter uraniireducens Rf4 MotA/TolQ/ExbB proton channel YP_001232795.1 4734713 D 351605 CDS YP_001232796.1 148266090 5163955 4735484..4736260 1 NC_009483.1 PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein 4736260 5163955 Gura_4080 Geobacter uraniireducens Rf4 OmpA/MotB domain-containing protein YP_001232796.1 4735484 D 351605 CDS YP_001232797.1 148266091 5163956 complement(4736485..4737699) 1 NC_009483.1 PFAM: transposase, mutator type; transposase, mutator type 4737699 5163956 Gura_4081 Geobacter uraniireducens Rf4 transposase, mutator type YP_001232797.1 4736485 R 351605 CDS YP_001232798.1 148266092 5163957 complement(4737940..4738734) 1 NC_009483.1 PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ 4738734 5163957 Gura_4082 Geobacter uraniireducens Rf4 type IV pilus assembly PilZ YP_001232798.1 4737940 R 351605 CDS YP_001232799.1 148266093 5166974 4739157..4740167 1 NC_009483.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 4740167 5166974 Gura_4083 Geobacter uraniireducens Rf4 NAD-dependent epimerase/dehydratase YP_001232799.1 4739157 D 351605 CDS YP_001232800.1 148266094 5166975 4740164..4741342 1 NC_009483.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; DegT/DnrJ/EryC1/StrS aminotransferase 4741342 5166975 Gura_4084 Geobacter uraniireducens Rf4 DegT/DnrJ/EryC1/StrS aminotransferase YP_001232800.1 4740164 D 351605 CDS YP_001232801.1 148266095 5166976 4741335..4742492 1 NC_009483.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 4742492 5166976 Gura_4085 Geobacter uraniireducens Rf4 UDP-N-acetylglucosamine 2-epimerase YP_001232801.1 4741335 D 351605 CDS YP_001232802.1 148266096 5164891 4742497..4743588 1 NC_009483.1 PFAM: N-acetylneuraminic acid synthase, N-terminal domain; N-acetylneuraminate synthase 4743588 5164891 Gura_4086 Geobacter uraniireducens Rf4 N-acetylneuraminate synthase YP_001232802.1 4742497 D 351605 CDS YP_001232803.1 148266097 5164892 4743585..4744223 1 NC_009483.1 carbonic anhydrase 4744223 5164892 Gura_4087 Geobacter uraniireducens Rf4 carbonic anhydrase YP_001232803.1 4743585 D 351605 CDS YP_001232804.1 148266098 5164893 4744220..4745275 1 NC_009483.1 PFAM: CBS domain containing protein; Nucleotidyl transferase; nucleotidyl transferase 4745275 5164893 Gura_4088 Geobacter uraniireducens Rf4 nucleotidyl transferase YP_001232804.1 4744220 D 351605 CDS YP_001232805.1 148266099 5163268 4745265..4745954 1 NC_009483.1 PFAM: acylneuraminate cytidylyltransferase; acylneuraminate cytidylyltransferase 4745954 5163268 Gura_4089 Geobacter uraniireducens Rf4 acylneuraminate cytidylyltransferase YP_001232805.1 4745265 D 351605 CDS YP_001232806.1 148266100 5163269 4745980..4747368 1 NC_009483.1 PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 4747368 5163269 Gura_4090 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001232806.1 4745980 D 351605 CDS YP_001232807.1 148266101 5163270 4747390..4749915 1 NC_009483.1 PFAM: protein of unknown function DUF115; hypothetical protein 4749915 5163270 Gura_4091 Geobacter uraniireducens Rf4 hypothetical protein YP_001232807.1 4747390 D 351605 CDS YP_001232808.1 148266102 5165531 complement(4750337..4750762) 1 NC_009483.1 hypothetical protein 4750762 5165531 Gura_4092 Geobacter uraniireducens Rf4 hypothetical protein YP_001232808.1 4750337 R 351605 CDS YP_001232809.1 148266103 5165532 complement(4750767..4751186) 1 NC_009483.1 PFAM: flagellar protein FliS; flagellar protein FliS 4751186 5165532 Gura_4093 Geobacter uraniireducens Rf4 flagellar protein FliS YP_001232809.1 4750767 R 351605 CDS YP_001232810.1 148266104 5165533 complement(4751273..4752694) 1 NC_009483.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; flagellar hook-associated 2 domain-containing protein 4752694 5165533 Gura_4094 Geobacter uraniireducens Rf4 flagellar hook-associated 2 domain-containing protein YP_001232810.1 4751273 R 351605 CDS YP_001232811.1 148266105 5162846 complement(4752905..4753735) 1 NC_009483.1 PFAM: flagellin domain protein; flagellin domain-containing protein 4753735 5162846 Gura_4095 Geobacter uraniireducens Rf4 flagellin domain-containing protein YP_001232811.1 4752905 R 351605 CDS YP_001232812.1 148266106 5162847 complement(4754017..4754508) 1 NC_009483.1 binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW 4754508 5162847 Gura_4096 Geobacter uraniireducens Rf4 flagellar assembly protein FliW YP_001232812.1 4754017 R 351605 CDS YP_001232813.1 148266107 5162848 complement(4754514..4754753) 1 NC_009483.1 PFAM: carbon storage regulator; carbon storage regulator CsrA 4754753 5162848 Gura_4097 Geobacter uraniireducens Rf4 carbon storage regulator CsrA YP_001232813.1 4754514 R 351605 CDS YP_001232814.1 148266108 5164390 complement(4754786..4755682) 1 NC_009483.1 TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; flagellar hook-associated protein 3 4755682 5164390 Gura_4098 Geobacter uraniireducens Rf4 flagellar hook-associated protein 3 YP_001232814.1 4754786 R 351605 CDS YP_001232815.1 148266109 5164391 complement(4755732..4757168) 1 NC_009483.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar hook-associated protein FlgK 4757168 5164391 Gura_4099 Geobacter uraniireducens Rf4 flagellar hook-associated protein FlgK YP_001232815.1 4755732 R 351605 CDS YP_001232816.1 148266110 5164392 complement(4757170..4757667) 1 NC_009483.1 hypothetical protein 4757667 5164392 Gura_4100 Geobacter uraniireducens Rf4 hypothetical protein YP_001232816.1 4757170 R 351605 CDS YP_001232817.1 148266111 5163599 complement(4757681..4757974) 1 NC_009483.1 hypothetical protein 4757974 5163599 Gura_4101 Geobacter uraniireducens Rf4 hypothetical protein YP_001232817.1 4757681 R 351605 CDS YP_001232818.1 148266112 5163600 complement(4758005..4758367) 1 NC_009483.1 rod binding protein-like protein 4758367 5163600 Gura_4102 Geobacter uraniireducens Rf4 rod binding protein-like protein YP_001232818.1 4758005 R 351605 CDS YP_001232819.1 148266113 5163601 complement(4758466..4759572) 1 NC_009483.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 4759572 flgI 5163601 flgI Geobacter uraniireducens Rf4 flagellar basal body P-ring protein YP_001232819.1 4758466 R 351605 CDS YP_001232820.1 148266114 5163052 complement(4759658..4760347) 1 NC_009483.1 PFAM: flagellar L-ring protein; flagellar L-ring protein 4760347 5163052 Gura_4104 Geobacter uraniireducens Rf4 flagellar L-ring protein YP_001232820.1 4759658 R 351605 CDS YP_001232821.1 148266115 5163053 complement(4760357..4761073) 1 NC_009483.1 PFAM: SAF domain; SAF domain-containing protein 4761073 5163053 Gura_4105 Geobacter uraniireducens Rf4 SAF domain-containing protein YP_001232821.1 4760357 R 351605 CDS YP_001232822.1 148266116 5163054 complement(4761099..4761887) 1 NC_009483.1 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 4761887 flgG 5163054 flgG Geobacter uraniireducens Rf4 flagellar basal body rod protein FlgG YP_001232822.1 4761099 R 351605 CDS YP_001232823.1 148266117 5166625 complement(4762039..4762773) 1 NC_009483.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body rod protein 4762773 5166625 Gura_4107 Geobacter uraniireducens Rf4 flagellar basal body rod protein YP_001232823.1 4762039 R 351605 CDS YP_001232824.1 148266118 5166626 complement(4762808..4763563) 1 NC_009483.1 TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; RNA polymerase sigma-28 subunit FliA/WhiG 4763563 5166626 Gura_4108 Geobacter uraniireducens Rf4 RNA polymerase sigma-28 subunit FliA/WhiG YP_001232824.1 4762808 R 351605 CDS YP_001232825.1 148266119 5166627 complement(4763560..4764492) 1 NC_009483.1 PFAM: Cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 4764492 5166627 Gura_4109 Geobacter uraniireducens Rf4 cobyrinic acid a,c-diamide synthase YP_001232825.1 4763560 R 351605 CDS YP_001232826.1 148266120 5162873 complement(4764489..4765832) 1 NC_009483.1 PFAM: GTP-binding signal recognition particle SRP54, G- domain; SMART: AAA ATPase; GTP-binding signal recognition particle 4765832 5162873 Gura_4110 Geobacter uraniireducens Rf4 GTP-binding signal recognition particle YP_001232826.1 4764489 R 351605 CDS YP_001232827.1 148266121 5162874 complement(4765822..4767906) 1 NC_009483.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 4767906 flhA 5162874 flhA Geobacter uraniireducens Rf4 flagellar biosynthesis protein FlhA YP_001232827.1 4765822 R 351605 CDS YP_001232828.1 148266122 5162875 4768241..4769485 1 NC_009483.1 PFAM: surface antigen (D15); surface antigen (D15) 4769485 5162875 Gura_4112 Geobacter uraniireducens Rf4 surface antigen (D15) YP_001232828.1 4768241 D 351605 CDS YP_001232829.1 148266123 5163779 4769736..4771109 1 NC_009483.1 PFAM: AAA-4 family protein; putative transcriptional regulator 4771109 5163779 Gura_4113 Geobacter uraniireducens Rf4 putative transcriptional regulator YP_001232829.1 4769736 D 351605 CDS YP_001232830.1 148266124 5163780 4771301..4771861 1 NC_009483.1 hypothetical protein 4771861 5163780 Gura_4114 Geobacter uraniireducens Rf4 hypothetical protein YP_001232830.1 4771301 D 351605 CDS YP_001232831.1 148266125 5163781 4771902..4773143 1 NC_009483.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 4773143 5163781 Gura_4115 Geobacter uraniireducens Rf4 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001232831.1 4771902 D 351605 CDS YP_001232832.1 148266126 5164046 4773140..4774504 1 NC_009483.1 hypothetical protein 4774504 5164046 Gura_4116 Geobacter uraniireducens Rf4 hypothetical protein YP_001232832.1 4773140 D 351605 CDS YP_001232833.1 148266127 5164047 4774561..4776918 1 NC_009483.1 hypothetical protein 4776918 5164047 Gura_4117 Geobacter uraniireducens Rf4 hypothetical protein YP_001232833.1 4774561 D 351605 CDS YP_001232834.1 148266128 5164048 4777109..4777486 1 NC_009483.1 PFAM: protein of unknown function DUF559; hypothetical protein 4777486 5164048 Gura_4118 Geobacter uraniireducens Rf4 hypothetical protein YP_001232834.1 4777109 D 351605 CDS YP_001232835.1 148266129 5162679 complement(4777717..4778634) 1 NC_009483.1 TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; putative radical SAM protein 4778634 5162679 Gura_4119 Geobacter uraniireducens Rf4 putative radical SAM protein YP_001232835.1 4777717 R 351605 CDS YP_001232836.1 148266130 5162680 complement(4778631..4779548) 1 NC_009483.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 4779548 5162680 Gura_4120 Geobacter uraniireducens Rf4 XRE family transcriptional regulator YP_001232836.1 4778631 R 351605 CDS YP_001232837.1 148266131 5162681 4779732..4780004 1 NC_009483.1 hypothetical protein 4780004 5162681 Gura_4121 Geobacter uraniireducens Rf4 hypothetical protein YP_001232837.1 4779732 D 351605 CDS YP_001232838.1 148266132 5166456 4780136..4782667 1 NC_009483.1 SMART: helicase c2; helicase c2 4782667 5166456 Gura_4122 Geobacter uraniireducens Rf4 helicase c2 YP_001232838.1 4780136 D 351605 CDS YP_001232839.1 148266133 5166457 complement(4782633..4783088) 1 NC_009483.1 hypothetical protein 4783088 5166457 Gura_4123 Geobacter uraniireducens Rf4 hypothetical protein YP_001232839.1 4782633 R 351605 CDS YP_001232840.1 148266134 5166458 complement(4783259..4783528) 1 NC_009483.1 hypothetical protein 4783528 5166458 Gura_4124 Geobacter uraniireducens Rf4 hypothetical protein YP_001232840.1 4783259 R 351605 CDS YP_001232841.1 148266135 5166259 complement(4783624..4784340) 1 NC_009483.1 amidophosphoribosyltransferase-like protein 4784340 5166259 Gura_4125 Geobacter uraniireducens Rf4 amidophosphoribosyltransferase-like protein YP_001232841.1 4783624 R 351605 CDS YP_001232842.1 148266136 5166260 complement(4784343..4784996) 1 NC_009483.1 PFAM: protein of unknown function DUF1121; hypothetical protein 4784996 5166260 Gura_4126 Geobacter uraniireducens Rf4 hypothetical protein YP_001232842.1 4784343 R 351605 CDS YP_001232843.1 148266137 5166261 complement(4785051..4786589) 1 NC_009483.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 4786589 5166261 Gura_4127 Geobacter uraniireducens Rf4 phosphoglyceromutase YP_001232843.1 4785051 R 351605 CDS YP_001232844.1 148266138 5163523 complement(4786690..4787151) 1 NC_009483.1 PFAM: protein of unknown function DUF163; hypothetical protein 4787151 5163523 Gura_4128 Geobacter uraniireducens Rf4 hypothetical protein YP_001232844.1 4786690 R 351605 CDS YP_001232845.1 148266139 5163524 complement(4787148..4787534) 1 NC_009483.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; iojap family protein 4787534 5163524 Gura_4129 Geobacter uraniireducens Rf4 iojap family protein YP_001232845.1 4787148 R 351605 CDS YP_001232846.1 148266140 5163525 complement(4787524..4788174) 1 NC_009483.1 TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 4788174 5163525 Gura_4130 Geobacter uraniireducens Rf4 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_001232846.1 4787524 R 351605 CDS YP_001232847.1 148266141 5166658 complement(4788206..4789462) 1 NC_009483.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 4789462 proA 5166658 proA Geobacter uraniireducens Rf4 gamma-glutamyl phosphate reductase YP_001232847.1 4788206 R 351605 CDS YP_001232848.1 148266142 5166659 complement(4789716..4790888) 1 NC_009483.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 4790888 5166659 Gura_4132 Geobacter uraniireducens Rf4 gamma-glutamyl kinase YP_001232848.1 4789716 R 351605 CDS YP_001232849.1 148266143 5166660 4790981..4791463 1 NC_009483.1 hypothetical protein 4791463 5166660 Gura_4133 Geobacter uraniireducens Rf4 hypothetical protein YP_001232849.1 4790981 D 351605 CDS YP_001232850.1 148266144 5162739 4791825..4793066 1 NC_009483.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 4793066 5162739 Gura_4134 Geobacter uraniireducens Rf4 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001232850.1 4791825 D 351605 CDS YP_001232851.1 148266145 5162740 complement(4793083..4794084) 1 NC_009483.1 PFAM: phosphate transporter; phosphate transporter 4794084 5162740 Gura_4135 Geobacter uraniireducens Rf4 phosphate transporter YP_001232851.1 4793083 R 351605 CDS YP_001232852.1 148266146 5162741 complement(4794077..4794694) 1 NC_009483.1 PFAM: protein of unknown function DUF47; hypothetical protein 4794694 5162741 Gura_4136 Geobacter uraniireducens Rf4 hypothetical protein YP_001232852.1 4794077 R 351605 CDS YP_001232853.1 148266147 5164288 4795133..4795945 1 NC_009483.1 TIGRFAM: putative undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; putative undecaprenol kinase 4795945 5164288 Gura_4137 Geobacter uraniireducens Rf4 putative undecaprenol kinase YP_001232853.1 4795133 D 351605 CDS YP_001232854.1 148266148 5164289 4795989..4796675 1 NC_009483.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 4796675 radC 5164289 radC Geobacter uraniireducens Rf4 DNA repair protein RadC YP_001232854.1 4795989 D 351605 CDS YP_001232855.1 148266149 5164290 complement(4796838..4798241) 1 NC_009483.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 4798241 5164290 Gura_4139 Geobacter uraniireducens Rf4 RNA-directed DNA polymerase YP_001232855.1 4796838 R 351605 CDS YP_001232856.1 148266150 5165872 complement(4798752..4799045) 1 NC_009483.1 hypothetical protein 4799045 5165872 Gura_4140 Geobacter uraniireducens Rf4 hypothetical protein YP_001232856.1 4798752 R 351605 CDS YP_001232857.1 148266151 5165873 complement(4799183..4800043) 1 NC_009483.1 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Serine-type D-Ala-D-Ala carboxypeptidase 4800043 5165873 Gura_4141 Geobacter uraniireducens Rf4 Serine-type D-Ala-D-Ala carboxypeptidase YP_001232857.1 4799183 R 351605 CDS YP_001232858.1 148266152 5165874 4800690..4801994 1 NC_009483.1 PFAM: protein of unknown function DUF898, transmembrane; hypothetical protein 4801994 5165874 Gura_4142 Geobacter uraniireducens Rf4 hypothetical protein YP_001232858.1 4800690 D 351605 CDS YP_001232859.1 148266153 5165718 4801991..4803034 1 NC_009483.1 PFAM: peptidase M48, Ste24p; peptidase M48, Ste24p 4803034 5165718 Gura_4143 Geobacter uraniireducens Rf4 peptidase M48, Ste24p YP_001232859.1 4801991 D 351605 CDS YP_001232860.1 148266154 5165719 4803123..4804412 1 NC_009483.1 SMART: AAA ATPase; ATPase AAA 4804412 5165719 Gura_4144 Geobacter uraniireducens Rf4 ATPase AAA YP_001232860.1 4803123 D 351605 CDS YP_001232861.1 148266155 5165720 4804752..4805063 1 NC_009483.1 hypothetical protein 4805063 5165720 Gura_4145 Geobacter uraniireducens Rf4 hypothetical protein YP_001232861.1 4804752 D 351605 CDS YP_001232862.1 148266156 5164702 4805149..4806435 1 NC_009483.1 transposase 4806435 5164702 Gura_4146 Geobacter uraniireducens Rf4 transposase YP_001232862.1 4805149 D 351605 CDS YP_001232863.1 148266157 5164703 4807170..4807847 1 NC_009483.1 PFAM: protein of unknown function DUF1526; hypothetical protein 4807847 5164703 Gura_4147 Geobacter uraniireducens Rf4 hypothetical protein YP_001232863.1 4807170 D 351605 CDS YP_001232864.1 148266158 5164704 4808220..4809299 1 NC_009483.1 PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 4809299 5164704 Gura_4148 Geobacter uraniireducens Rf4 filamentation induced by cAMP protein fic YP_001232864.1 4808220 D 351605 CDS YP_001232865.1 148266159 5164136 4809661..4809927 1 NC_009483.1 hypothetical protein 4809927 5164136 Gura_4149 Geobacter uraniireducens Rf4 hypothetical protein YP_001232865.1 4809661 D 351605 CDS YP_001232866.1 148266160 5164137 4809955..4810617 1 NC_009483.1 hypothetical protein 4810617 5164137 Gura_4150 Geobacter uraniireducens Rf4 hypothetical protein YP_001232866.1 4809955 D 351605 CDS YP_001232867.1 148266161 5164138 complement(4810854..4812158) 1 NC_009483.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 4812158 5164138 Gura_4151 Geobacter uraniireducens Rf4 RNA-directed DNA polymerase YP_001232867.1 4810854 R 351605 CDS YP_001232868.1 148266162 5164151 4812895..4813239 1 NC_009483.1 PFAM: histidine triad (HIT) protein; histidine triad (HIT) protein 4813239 5164151 Gura_4152 Geobacter uraniireducens Rf4 histidine triad (HIT) protein YP_001232868.1 4812895 D 351605 CDS YP_001232869.1 148266163 5164152 4813607..4814113 1 NC_009483.1 PFAM: Rubrerythrin; rubrerythrin 4814113 5164152 Gura_4153 Geobacter uraniireducens Rf4 rubrerythrin YP_001232869.1 4813607 D 351605 CDS YP_001232870.1 148266164 5164153 4814136..4815134 1 NC_009483.1 PFAM: O-methyltransferase, family 2; Methyltransferase type 12; O-methyltransferase family protein 4815134 5164153 Gura_4154 Geobacter uraniireducens Rf4 O-methyltransferase family protein YP_001232870.1 4814136 D 351605 CDS YP_001232871.1 148266165 5166307 4815312..4815572 1 NC_009483.1 hypothetical protein 4815572 5166307 Gura_4155 Geobacter uraniireducens Rf4 hypothetical protein YP_001232871.1 4815312 D 351605 CDS YP_001232872.1 148266166 5166308 4815844..4816149 1 NC_009483.1 hypothetical protein 4816149 5166308 Gura_4156 Geobacter uraniireducens Rf4 hypothetical protein YP_001232872.1 4815844 D 351605 CDS YP_001232873.1 148266167 5166309 4816343..4817989 1 NC_009483.1 catalyzes the hydrolysis of pyrophosphate to phosphate; putative manganese-dependent inorganic pyrophosphatase 4817989 5166309 Gura_4157 Geobacter uraniireducens Rf4 putative manganese-dependent inorganic pyrophosphatase YP_001232873.1 4816343 D 351605 CDS YP_001232874.1 148266168 5166256 complement(4818044..4818526) 1 NC_009483.1 PFAM: CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase 4818526 5166256 Gura_4158 Geobacter uraniireducens Rf4 zinc-binding CMP/dCMP deaminase YP_001232874.1 4818044 R 351605 CDS YP_001232875.1 148266169 5166257 complement(4818631..4819404) 1 NC_009483.1 PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 4819404 5166257 Gura_4159 Geobacter uraniireducens Rf4 xylose isomerase domain-containing protein YP_001232875.1 4818631 R 351605 CDS YP_001232876.1 148266170 5166258 complement(4819397..4820452) 1 NC_009483.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; Ion transport 2 domain protein; TrkA domain-containing protein 4820452 5166258 Gura_4160 Geobacter uraniireducens Rf4 TrkA domain-containing protein YP_001232876.1 4819397 R 351605 CDS YP_001232877.1 148266171 5166304 4820612..4821319 1 NC_009483.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; GntR family transcriptional regulator 4821319 5166304 Gura_4161 Geobacter uraniireducens Rf4 GntR family transcriptional regulator YP_001232877.1 4820612 D 351605 CDS YP_001232878.1 148266172 5166305 4821466..4822854 1 NC_009483.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 4822854 5166305 Gura_4162 Geobacter uraniireducens Rf4 selenocysteine synthase YP_001232878.1 4821466 D 351605 CDS YP_001232879.1 148266173 5166306 4823026..4823727 1 NC_009483.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 4823727 ispD 5166306 ispD Geobacter uraniireducens Rf4 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_001232879.1 4823026 D 351605 CDS YP_001232880.1 148266174 5166881 4823737..4824210 1 NC_009483.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 4824210 ispF 5166881 ispF Geobacter uraniireducens Rf4 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_001232880.1 4823737 D 351605 CDS YP_001232881.1 148266175 5166882 4824247..4824576 1 NC_009483.1 PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 4824576 5166882 Gura_4165 Geobacter uraniireducens Rf4 DNA polymerase subunit beta YP_001232881.1 4824247 D 351605 CDS YP_001232882.1 148266176 5166883 4824566..4824946 1 NC_009483.1 PFAM: protein of unknown function DUF86; hypothetical protein 4824946 5166883 Gura_4166 Geobacter uraniireducens Rf4 hypothetical protein YP_001232882.1 4824566 D 351605 CDS YP_001232883.1 148266177 5165835 4824974..4826680 1 NC_009483.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 4826680 5165835 Gura_4167 Geobacter uraniireducens Rf4 glutaminyl-tRNA synthetase YP_001232883.1 4824974 D 351605 CDS YP_001232884.1 148266178 5165836 4826723..4828591 1 NC_009483.1 PFAM: MCP methyltransferase, CheR-type; TPR repeat-containing protein; response regulator receiver; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; response regulator receiver protein 4828591 5165836 Gura_4168 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001232884.1 4826723 D 351605 CDS YP_001232885.1 148266179 5165837 4828619..4829167 1 NC_009483.1 PFAM: CheW domain protein; putative CheW protein 4829167 5165837 Gura_4169 Geobacter uraniireducens Rf4 putative CheW protein YP_001232885.1 4828619 D 351605 CDS YP_001232886.1 148266180 5164375 4829219..4830955 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4830955 5164375 Gura_4170 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001232886.1 4829219 D 351605 CDS YP_001232887.1 148266181 5164376 4830956..4833016 1 NC_009483.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; CheA signal transduction histidine kinase 4833016 5164376 Gura_4171 Geobacter uraniireducens Rf4 CheA signal transduction histidine kinase YP_001232887.1 4830956 D 351605 CDS YP_001232888.1 148266182 5164377 4833055..4834098 1 NC_009483.1 PFAM: CheB methylesterase; response regulator receiver; response regulator receiver modulated CheB methylesterase 4834098 5164377 Gura_4172 Geobacter uraniireducens Rf4 response regulator receiver modulated CheB methylesterase YP_001232888.1 4833055 D 351605 CDS YP_001232889.1 148266183 5166284 4834102..4834482 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 4834482 5166284 Gura_4173 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001232889.1 4834102 D 351605 CDS YP_001232890.1 148266184 5166285 4834570..4836054 1 NC_009483.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 4836054 cysS 5166285 cysS Geobacter uraniireducens Rf4 cysteinyl-tRNA synthetase YP_001232890.1 4834570 D 351605 CDS YP_001232891.1 148266185 5166286 complement(4836113..4836298) 1 NC_009483.1 PFAM: CopG domain protein DNA-binding domain protein; CopG/DNA-binding domain-containing protein 4836298 5166286 Gura_4175 Geobacter uraniireducens Rf4 CopG/DNA-binding domain-containing protein YP_001232891.1 4836113 R 351605 CDS YP_001232892.1 148266186 5165973 complement(4836600..4838867) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; hydrogenase large subunit domain protein; Fe-S cluster domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; sigma-54 dependent trancsriptional regulator 4838867 5165973 Gura_4176 Geobacter uraniireducens Rf4 sigma-54 dependent trancsriptional regulator YP_001232892.1 4836600 R 351605 CDS YP_001232893.1 148266187 5165974 4839252..4839467 1 NC_009483.1 hypothetical protein 4839467 5165974 Gura_4177 Geobacter uraniireducens Rf4 hypothetical protein YP_001232893.1 4839252 D 351605 CDS YP_001232894.1 148266188 5165975 4839530..4840987 1 NC_009483.1 PFAM: transglutaminase domain protein; transglutaminase domain-containing protein 4840987 5165975 Gura_4178 Geobacter uraniireducens Rf4 transglutaminase domain-containing protein YP_001232894.1 4839530 D 351605 CDS YP_001232895.1 148266189 5162646 complement(4840992..4841840) 1 NC_009483.1 TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; cobalt ABC transporter ATPase 4841840 5162646 Gura_4179 Geobacter uraniireducens Rf4 cobalt ABC transporter ATPase YP_001232895.1 4840992 R 351605 CDS YP_001232896.1 148266190 5162647 complement(4841958..4842716) 1 NC_009483.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; cobalt ABC transporter inner membrane protein CbiQ 4842716 5162647 Gura_4180 Geobacter uraniireducens Rf4 cobalt ABC transporter inner membrane protein CbiQ YP_001232896.1 4841958 R 351605 CDS YP_001232897.1 148266191 5162648 complement(4842773..4843117) 1 NC_009483.1 hypothetical protein 4843117 5162648 Gura_4181 Geobacter uraniireducens Rf4 hypothetical protein YP_001232897.1 4842773 R 351605 CDS YP_001232898.1 148266192 5163233 complement(4843114..4843869) 1 NC_009483.1 catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM 4843869 5163233 Gura_4182 Geobacter uraniireducens Rf4 cobalt transport protein CbiM YP_001232898.1 4843114 R 351605 CDS YP_001232899.1 148266193 5163234 complement(4844209..4845516) 1 NC_009483.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 4845516 5163234 Gura_4183 Geobacter uraniireducens Rf4 thiamine biosynthesis protein ThiC YP_001232899.1 4844209 R 351605 CDS YP_001232900.1 148266194 5162831 complement(4845606..4846988) 1 NC_009483.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 4846988 5162831 Gura_4184 Geobacter uraniireducens Rf4 cobyrinic acid a,c-diamide synthase YP_001232900.1 4845606 R 351605 CDS YP_001232901.1 148266195 5162832 complement(4847068..4847670) 1 NC_009483.1 PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 4847670 5162832 Gura_4185 Geobacter uraniireducens Rf4 phosphoglycerate mutase YP_001232901.1 4847068 R 351605 CDS YP_001232902.1 148266196 5162833 complement(4847667..4848413) 1 NC_009483.1 TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; cobalamin 5'-phosphate synthase 4848413 5162833 Gura_4186 Geobacter uraniireducens Rf4 cobalamin 5'-phosphate synthase YP_001232902.1 4847667 R 351605 CDS YP_001232903.1 148266197 5163310 complement(4848494..4849552) 1 NC_009483.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 4849552 cobT 5163310 cobT Geobacter uraniireducens Rf4 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_001232903.1 4848494 R 351605 CDS YP_001232904.1 148266198 5163311 complement(4849657..4850178) 1 NC_009483.1 PFAM: cobalbumin biosynthesis enzyme; adenosylcobinamide-phosphate guanylyltransferase 4850178 5163311 Gura_4188 Geobacter uraniireducens Rf4 adenosylcobinamide-phosphate guanylyltransferase YP_001232904.1 4849657 R 351605 CDS YP_001232905.1 148266199 5163312 complement(4850510..4851124) 1 NC_009483.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 4851124 engB 5163312 engB Geobacter uraniireducens Rf4 ribosome biogenesis GTP-binding protein YsxC YP_001232905.1 4850510 R 351605 CDS YP_001232906.1 148266200 5163829 4851420..4852274 1 NC_009483.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; HDOD; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 4852274 5163829 Gura_4190 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001232906.1 4851420 D 351605 CDS YP_001232907.1 148266201 5163830 4852779..4854209 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 4854209 5163830 Gura_4191 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001232907.1 4852779 D 351605 CDS YP_001232908.1 148266202 5163626 4854226..4855590 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 4855590 5163626 Gura_4192 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001232908.1 4854226 D 351605 CDS YP_001232909.1 148266203 5163627 4855636..4858200 1 NC_009483.1 TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35; alpha-glucan phosphorylase 4858200 5163627 Gura_4193 Geobacter uraniireducens Rf4 alpha-glucan phosphorylase YP_001232909.1 4855636 D 351605 CDS YP_001232910.1 148266204 5163628 complement(4858308..4858595) 1 NC_009483.1 hypothetical protein 4858595 5163628 Gura_4194 Geobacter uraniireducens Rf4 hypothetical protein YP_001232910.1 4858308 R 351605 CDS YP_001232911.1 148266205 5163999 complement(4858592..4858852) 1 NC_009483.1 hypothetical protein 4858852 5163999 Gura_4195 Geobacter uraniireducens Rf4 hypothetical protein YP_001232911.1 4858592 R 351605 CDS YP_001232912.1 148266206 5164000 complement(4859067..4860131) 1 NC_009483.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 4860131 flhB 5164000 flhB Geobacter uraniireducens Rf4 flagellar biosynthesis protein FlhB YP_001232912.1 4859067 R 351605 CDS YP_001232913.1 148266207 5164001 complement(4860141..4860926) 1 NC_009483.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; flagellar biosynthetic protein FliR 4860926 5164001 Gura_4197 Geobacter uraniireducens Rf4 flagellar biosynthetic protein FliR YP_001232913.1 4860141 R 351605 CDS YP_001232914.1 148266208 5164083 complement(4860929..4861198) 1 NC_009483.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ, family 3; flagellar biosynthetic protein FliQ 4861198 5164083 Gura_4198 Geobacter uraniireducens Rf4 flagellar biosynthetic protein FliQ YP_001232914.1 4860929 R 351605 CDS YP_001232915.1 148266209 5164084 complement(4861410..4862165) 1 NC_009483.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 4862165 fliP 5164084 fliP Geobacter uraniireducens Rf4 flagellar biosynthesis protein FliP YP_001232915.1 4861410 R 351605 CDS YP_001232916.1 148266210 5164085 complement(4862162..4862650) 1 NC_009483.1 hypothetical protein 4862650 5164085 Gura_4200 Geobacter uraniireducens Rf4 hypothetical protein YP_001232916.1 4862162 R 351605 CDS YP_001232917.1 148266211 5164112 complement(4862647..4862958) 1 NC_009483.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliN 4862958 5164112 Gura_4201 Geobacter uraniireducens Rf4 flagellar motor switch protein FliN YP_001232917.1 4862647 R 351605 CDS YP_001232918.1 148266212 5164113 complement(4862948..4863934) 1 NC_009483.1 PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; flagellar motor switch protein FliM 4863934 5164113 Gura_4202 Geobacter uraniireducens Rf4 flagellar motor switch protein FliM YP_001232918.1 4862948 R 351605 CDS YP_001232919.1 148266213 5164114 complement(4863946..4864446) 1 NC_009483.1 PFAM: flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 4864446 5164114 Gura_4203 Geobacter uraniireducens Rf4 flagellar basal body-associated protein FliL YP_001232919.1 4863946 R 351605 CDS YP_001232920.1 148266214 5164109 complement(4864749..4865633) 1 NC_009483.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; hypothetical protein 4865633 5164109 Gura_4204 Geobacter uraniireducens Rf4 hypothetical protein YP_001232920.1 4864749 R 351605 CDS YP_001232921.1 148266215 5164110 complement(4865815..4866204) 1 NC_009483.1 TIGRFAM: flagellar operon protein; flagellar operon protein 4866204 5164110 Gura_4205 Geobacter uraniireducens Rf4 flagellar operon protein YP_001232921.1 4865815 R 351605 CDS YP_001232922.1 148266216 5164111 complement(4866205..4866870) 1 NC_009483.1 PFAM: flagellar hook capping protein; flagellar hook capping protein 4866870 5164111 Gura_4206 Geobacter uraniireducens Rf4 flagellar hook capping protein YP_001232922.1 4866205 R 351605 CDS YP_001232923.1 148266217 5164562 complement(4866889..4868703) 1 NC_009483.1 PFAM: flagellar hook-length control protein; flagellar hook-length control protein 4868703 5164562 Gura_4207 Geobacter uraniireducens Rf4 flagellar hook-length control protein YP_001232923.1 4866889 R 351605 CDS YP_001232924.1 148266218 5164563 complement(4868805..4869350) 1 NC_009483.1 hypothetical protein 4869350 5164563 Gura_4208 Geobacter uraniireducens Rf4 hypothetical protein YP_001232924.1 4868805 R 351605 CDS YP_001232925.1 148266219 5164564 complement(4869347..4869793) 1 NC_009483.1 TIGRFAM: flagellar export protein FliJ; flagellar export protein FliJ 4869793 5164564 Gura_4209 Geobacter uraniireducens Rf4 flagellar export protein FliJ YP_001232925.1 4869347 R 351605 CDS YP_001232926.1 148266220 5164608 complement(4869873..4871204) 1 NC_009483.1 TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; SMART: AAA ATPase; flagellar protein export ATPase FliI 4871204 5164608 Gura_4210 Geobacter uraniireducens Rf4 flagellar protein export ATPase FliI YP_001232926.1 4869873 R 351605 CDS YP_001232927.1 148266221 5164609 complement(4871185..4871994) 1 NC_009483.1 flagellar biosynthesis/type III secretory pathway protein-like protein 4871994 5164609 Gura_4211 Geobacter uraniireducens Rf4 flagellar biosynthesis/type III secretory pathway protein-like protein YP_001232927.1 4871185 R 351605 CDS YP_001232928.1 148266222 5164610 complement(4871981..4872973) 1 NC_009483.1 PFAM: flagellar motor switch protein FliG; flagellar motor switch protein FliG 4872973 5164610 Gura_4212 Geobacter uraniireducens Rf4 flagellar motor switch protein FliG YP_001232928.1 4871981 R 351605 CDS YP_001232929.1 148266223 5164428 complement(4872994..4874571) 1 NC_009483.1 TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring C-terminal domain protein; flagellar M-ring protein FliF 4874571 5164428 Gura_4213 Geobacter uraniireducens Rf4 flagellar M-ring protein FliF YP_001232929.1 4872994 R 351605 CDS YP_001232930.1 148266224 5164429 complement(4874635..4874943) 1 NC_009483.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex subunit FliE 4874943 5164429 Gura_4214 Geobacter uraniireducens Rf4 flagellar hook-basal body complex subunit FliE YP_001232930.1 4874635 R 351605 CDS YP_001232931.1 148266225 5164430 complement(4875002..4875442) 1 NC_009483.1 TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal-body rod protein FlgC 4875442 5164430 Gura_4215 Geobacter uraniireducens Rf4 flagellar basal-body rod protein FlgC YP_001232931.1 4875002 R 351605 CDS YP_001232932.1 148266226 5164960 complement(4875443..4875865) 1 NC_009483.1 TIGRFAM: flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB 4875865 5164960 Gura_4216 Geobacter uraniireducens Rf4 flagellar basal-body rod protein FlgB YP_001232932.1 4875443 R 351605 CDS YP_001232933.1 148266227 5164961 complement(4875996..4878050) 1 NC_009483.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; hypothetical protein 4878050 5164961 Gura_4217 Geobacter uraniireducens Rf4 hypothetical protein YP_001232933.1 4875996 R 351605 CDS YP_001232934.1 148266228 5164962 complement(4878378..4879412) 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 4879412 5164962 Gura_4218 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001232934.1 4878378 R 351605 CDS YP_001232935.1 148266229 5164868 complement(4879427..4879933) 1 NC_009483.1 inhibitor of MCP methylation CheC-like protein 4879933 5164868 Gura_4219 Geobacter uraniireducens Rf4 inhibitor of MCP methylation CheC-like protein YP_001232935.1 4879427 R 351605 CDS YP_001232936.1 148266230 5164869 complement(4879933..4880295) 1 NC_009483.1 PFAM: response regulator receiver; response regulator receiver protein 4880295 5164869 Gura_4220 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001232936.1 4879933 R 351605 CDS YP_001232937.1 148266231 5164870 complement(4880527..4881606) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS/PAC sensor signal transduction histidine kinase 4881606 5164870 Gura_4221 Geobacter uraniireducens Rf4 PAS/PAC sensor signal transduction histidine kinase YP_001232937.1 4880527 R 351605 CDS YP_001232938.1 148266232 5164514 4881883..4883586 1 NC_009483.1 PFAM: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4883586 5164514 Gura_4222 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001232938.1 4881883 D 351605 CDS YP_001232939.1 148266233 5164515 complement(4883561..4883857) 1 NC_009483.1 PFAM: regulatory protein, ArsR; regulatory protein ArsR 4883857 5164515 Gura_4223 Geobacter uraniireducens Rf4 regulatory protein ArsR YP_001232939.1 4883561 R 351605 CDS YP_001232940.1 148266234 5164516 complement(4883899..4884276) 1 NC_009483.1 PFAM: Rhodanese domain protein; rhodanese domain-containing protein 4884276 5164516 Gura_4224 Geobacter uraniireducens Rf4 rhodanese domain-containing protein YP_001232940.1 4883899 R 351605 CDS YP_001232941.1 148266235 5162664 complement(4884313..4885143) 1 NC_009483.1 PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 4885143 5162664 Gura_4225 Geobacter uraniireducens Rf4 beta-lactamase domain-containing protein YP_001232941.1 4884313 R 351605 CDS YP_001232942.1 148266236 5162665 complement(4885140..4885352) 1 NC_009483.1 hypothetical protein 4885352 5162665 Gura_4226 Geobacter uraniireducens Rf4 hypothetical protein YP_001232942.1 4885140 R 351605 CDS YP_001232943.1 148266237 5162666 complement(4885427..4885804) 1 NC_009483.1 TIGRFAM: C_GCAxxG_C_C family protein; C_GCAxxG_C_C family protein 4885804 5162666 Gura_4227 Geobacter uraniireducens Rf4 C_GCAxxG_C_C family protein YP_001232943.1 4885427 R 351605 CDS YP_001232944.1 148266238 5165112 complement(4885914..4889129) 1 NC_009483.1 PFAM: acriflavin resistance protein; acriflavin resistance protein 4889129 5165112 Gura_4228 Geobacter uraniireducens Rf4 acriflavin resistance protein YP_001232944.1 4885914 R 351605 CDS YP_001232945.1 148266239 5165113 complement(4889227..4890342) 1 NC_009483.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 4890342 5165113 Gura_4229 Geobacter uraniireducens Rf4 RND family efflux transporter MFP subunit YP_001232945.1 4889227 R 351605 CDS YP_001232946.1 148266240 5165114 complement(4890339..4891715) 1 NC_009483.1 PFAM: outer membrane efflux protein; outer membrane efflux protein 4891715 5165114 Gura_4230 Geobacter uraniireducens Rf4 outer membrane efflux protein YP_001232946.1 4890339 R 351605 CDS YP_001232947.1 148266241 5165103 complement(4892007..4893470) 1 NC_009483.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N 4893470 5165103 Gura_4231 Geobacter uraniireducens Rf4 proton-translocating NADH-quinone oxidoreductase subunit N YP_001232947.1 4892007 R 351605 CDS YP_001232948.1 148266242 5165104 complement(4893503..4895080) 1 NC_009483.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 4895080 5165104 Gura_4232 Geobacter uraniireducens Rf4 proton-translocating NADH-quinone oxidoreductase subunit M YP_001232948.1 4893503 R 351605 CDS YP_001232949.1 148266243 5165105 complement(4895122..4897128) 1 NC_009483.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L 4897128 5165105 Gura_4233 Geobacter uraniireducens Rf4 proton-translocating NADH-quinone oxidoreductase subunit L YP_001232949.1 4895122 R 351605 CDS YP_001232950.1 148266244 5165100 complement(4897174..4897476) 1 NC_009483.1 PFAM: NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase subunit 4L 4897476 5165100 Gura_4234 Geobacter uraniireducens Rf4 NADH-ubiquinone oxidoreductase subunit 4L YP_001232950.1 4897174 R 351605 CDS YP_001232951.1 148266245 5165101 complement(4897496..4898002) 1 NC_009483.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 4898002 5165101 Gura_4235 Geobacter uraniireducens Rf4 NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 YP_001232951.1 4897496 R 351605 CDS YP_001232952.1 148266246 5165102 complement(4898014..4898412) 1 NC_009483.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; NADH-quinone oxidoreductase subunit I 4898412 5165102 Gura_4236 Geobacter uraniireducens Rf4 NADH-quinone oxidoreductase subunit I YP_001232952.1 4898014 R 351605 CDS YP_001232953.1 148266247 5165353 complement(4898440..4899489) 1 NC_009483.1 PFAM: respiratory-chain NADH dehydrogenase, subunit 1; NADH dehydrogenase (quinone) 4899489 5165353 Gura_4237 Geobacter uraniireducens Rf4 NADH dehydrogenase (quinone) YP_001232953.1 4898440 R 351605 CDS YP_001232954.1 148266248 5165354 complement(4899536..4902022) 1 NC_009483.1 PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase 4902022 5165354 Gura_4238 Geobacter uraniireducens Rf4 molybdopterin oxidoreductase YP_001232954.1 4899536 R 351605 CDS YP_001232955.1 148266249 5165355 complement(4902065..4903846) 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; NADH dehydrogenase (quinone) 4903846 5165355 Gura_4239 Geobacter uraniireducens Rf4 NADH dehydrogenase (quinone) YP_001232955.1 4902065 R 351605 CDS YP_001232956.1 148266250 5165374 complement(4903883..4904389) 1 NC_009483.1 PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; NADH dehydrogenase (ubiquinone), 24 kDa subunit 4904389 5165374 Gura_4240 Geobacter uraniireducens Rf4 NADH dehydrogenase (ubiquinone), 24 kDa subunit YP_001232956.1 4903883 R 351605 CDS YP_001232957.1 148266251 5165375 complement(4904418..4905590) 1 NC_009483.1 TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; NADH dehydrogenase I subunit D 4905590 5165375 Gura_4241 Geobacter uraniireducens Rf4 NADH dehydrogenase I subunit D YP_001232957.1 4904418 R 351605 CDS YP_001232958.1 148266252 5165376 complement(4905632..4906126) 1 NC_009483.1 TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone), 30 kDa subunit; NADH (or F420H2) dehydrogenase subunit C 4906126 5165376 Gura_4242 Geobacter uraniireducens Rf4 NADH (or F420H2) dehydrogenase subunit C YP_001232958.1 4905632 R 351605 CDS YP_001232959.1 148266253 5165424 complement(4906157..4906669) 1 NC_009483.1 TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH-quinone oxidoreductase subunit B 4906669 5165424 Gura_4243 Geobacter uraniireducens Rf4 NADH-quinone oxidoreductase subunit B YP_001232959.1 4906157 R 351605 CDS YP_001232960.1 148266254 5165425 complement(4906660..4907016) 1 NC_009483.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 4907016 5165425 Gura_4244 Geobacter uraniireducens Rf4 NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 YP_001232960.1 4906660 R 351605 CDS YP_001232961.1 148266255 5165426 4907315..4908598 1 NC_009483.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 4908598 5165426 Gura_4245 Geobacter uraniireducens Rf4 glutamate-1-semialdehyde aminotransferase YP_001232961.1 4907315 D 351605 CDS YP_001232962.1 148266256 5165458 4908694..4908975 1 NC_009483.1 hypothetical protein 4908975 5165458 Gura_4246 Geobacter uraniireducens Rf4 hypothetical protein YP_001232962.1 4908694 D 351605 CDS YP_001232963.1 148266257 5165459 4908953..4909339 1 NC_009483.1 hypothetical protein 4909339 5165459 Gura_4247 Geobacter uraniireducens Rf4 hypothetical protein YP_001232963.1 4908953 D 351605 CDS YP_001232964.1 148266258 5165460 4909345..4910034 1 NC_009483.1 TIGRFAM: ATP synthase F0, A subunit; PFAM: H+-transporting two-sector ATPase, A subunit; ATP synthase F0 subunit A 4910034 5165460 Gura_4248 Geobacter uraniireducens Rf4 ATP synthase F0 subunit A YP_001232964.1 4909345 D 351605 CDS YP_001232965.1 148266259 5165631 4910137..4910412 1 NC_009483.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+-transporting two-sector ATPase, C subunit; ATP synthase F0 subunit C 4910412 5165631 Gura_4249 Geobacter uraniireducens Rf4 ATP synthase F0 subunit C YP_001232965.1 4910137 D 351605 CDS YP_001232966.1 148266260 5165632 4910708..4912153 1 NC_009483.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent; glyceraldehyde-3-phosphate dehydrogenase 4912153 5165632 Gura_4250 Geobacter uraniireducens Rf4 glyceraldehyde-3-phosphate dehydrogenase YP_001232966.1 4910708 D 351605 CDS YP_001232967.1 148266261 5165633 complement(4912253..4913656) 1 NC_009483.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 4913656 5165633 Gura_4251 Geobacter uraniireducens Rf4 RNA-directed DNA polymerase YP_001232967.1 4912253 R 351605 CDS YP_001232968.1 148266262 5165919 complement(4914210..4915697) 1 NC_009483.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 4915697 5165919 Gura_4252 Geobacter uraniireducens Rf4 leucyl aminopeptidase YP_001232968.1 4914210 R 351605 CDS YP_001232969.1 148266263 5165920 4915814..4916527 1 NC_009483.1 PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; putative hydrolase 4916527 5165920 Gura_4253 Geobacter uraniireducens Rf4 putative hydrolase YP_001232969.1 4915814 D 351605 CDS YP_001232970.1 148266264 5165921 complement(4916581..4917804) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: histidine kinase, HAMP region domain protein; PAS fold domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein 4917804 5165921 Gura_4254 Geobacter uraniireducens Rf4 putative PAS/PAC sensor protein YP_001232970.1 4916581 R 351605 CDS YP_001232971.1 148266265 5165775 complement(4917894..4918178) 1 NC_009483.1 hypothetical protein 4918178 5165775 Gura_4255 Geobacter uraniireducens Rf4 hypothetical protein YP_001232971.1 4917894 R 351605 CDS YP_001232972.1 148266266 5165776 4918430..4919203 1 NC_009483.1 PFAM: Cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 4919203 5165776 Gura_4256 Geobacter uraniireducens Rf4 cobyrinic acid a,c-diamide synthase YP_001232972.1 4918430 D 351605 CDS YP_001232973.1 148266267 5165777 4919196..4920032 1 NC_009483.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; parB-like partition protein 4920032 5165777 Gura_4257 Geobacter uraniireducens Rf4 parB-like partition protein YP_001232973.1 4919196 D 351605 CDS YP_001232974.1 148266268 5165795 4920218..4920628 1 NC_009483.1 PFAM: H+-transporting two-sector ATPase, B/B' subunit; H+-transporting two-sector ATPase subunit B/B' 4920628 5165795 Gura_4258 Geobacter uraniireducens Rf4 H+-transporting two-sector ATPase subunit B/B' YP_001232974.1 4920218 D 351605 CDS YP_001232975.1 148266269 5165796 4920630..4921247 1 NC_009483.1 PFAM: H+-transporting two-sector ATPase, B/B' subunit; H+-transporting two-sector ATPase subunit B/B' 4921247 5165796 Gura_4259 Geobacter uraniireducens Rf4 H+-transporting two-sector ATPase subunit B/B' YP_001232975.1 4920630 D 351605 CDS YP_001232976.1 148266270 5165797 4921244..4921786 1 NC_009483.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 4921786 5165797 Gura_4260 Geobacter uraniireducens Rf4 F0F1 ATP synthase subunit delta YP_001232976.1 4921244 D 351605 CDS YP_001232977.1 148266271 5165861 4921796..4923304 1 NC_009483.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 4923304 5165861 Gura_4261 Geobacter uraniireducens Rf4 F0F1 ATP synthase subunit alpha YP_001232977.1 4921796 D 351605 CDS YP_001232978.1 148266272 5165862 4923323..4924186 1 NC_009483.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 4924186 5165862 Gura_4262 Geobacter uraniireducens Rf4 F0F1 ATP synthase subunit gamma YP_001232978.1 4923323 D 351605 CDS YP_001232979.1 148266273 5165863 4924243..4925655 1 NC_009483.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 4925655 5165863 Gura_4263 Geobacter uraniireducens Rf4 F0F1 ATP synthase subunit beta YP_001232979.1 4924243 D 351605 CDS YP_001232980.1 148266274 5165829 4925742..4926158 1 NC_009483.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon 4926158 atpC 5165829 atpC Geobacter uraniireducens Rf4 F0F1 ATP synthase subunit epsilon YP_001232980.1 4925742 D 351605 CDS YP_001232981.1 148266275 5165830 complement(4926284..4926868) 1 NC_009483.1 PFAM: protein of unknown function UPF0153; hypothetical protein 4926868 5165830 Gura_4265 Geobacter uraniireducens Rf4 hypothetical protein YP_001232981.1 4926284 R 351605 CDS YP_001232982.1 148266276 5165831 4927018..4927404 1 NC_009483.1 hypothetical protein 4927404 5165831 Gura_4266 Geobacter uraniireducens Rf4 hypothetical protein YP_001232982.1 4927018 D 351605 CDS YP_001232983.1 148266277 5165789 4927420..4927965 1 NC_009483.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; metal dependent phosphohydrolase 4927965 5165789 Gura_4267 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001232983.1 4927420 D 351605 CDS YP_001232984.1 148266278 5165790 4928120..4929151 1 NC_009483.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 4929151 5165790 Gura_4268 Geobacter uraniireducens Rf4 4-hydroxythreonine-4-phosphate dehydrogenase YP_001232984.1 4928120 D 351605 CDS YP_001232985.1 148266279 5165791 4929148..4930101 1 NC_009483.1 PFAM: glycosyl transferase, family 51; glycosyl transferase family protein 4930101 5165791 Gura_4269 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001232985.1 4929148 D 351605 CDS YP_001232986.1 148266280 5167057 4930365..4931450 1 NC_009483.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; response regulator receiver modulated metal dependent phosphohydrolase 4931450 5167057 Gura_4270 Geobacter uraniireducens Rf4 response regulator receiver modulated metal dependent phosphohydrolase YP_001232986.1 4930365 D 351605 CDS YP_001232987.1 148266281 5167058 4931503..4933080 1 NC_009483.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; histidine kinase 4933080 5167058 Gura_4271 Geobacter uraniireducens Rf4 histidine kinase YP_001232987.1 4931503 D 351605 CDS YP_001232988.1 148266282 5167059 complement(4933070..4934074) 1 NC_009483.1 PFAM: thiamine biosynthesis protein; thiamine biosynthesis protein 4934074 5167059 Gura_4272 Geobacter uraniireducens Rf4 thiamine biosynthesis protein YP_001232988.1 4933070 R 351605 CDS YP_001232989.1 148266283 5166504 4934250..4935908 1 NC_009483.1 PFAM: General secretory system II, protein E domain protein; general secretion pathway protein E 4935908 5166504 Gura_4273 Geobacter uraniireducens Rf4 general secretion pathway protein E YP_001232989.1 4934250 D 351605 CDS YP_001232990.1 148266284 5166505 4935923..4936993 1 NC_009483.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein 4936993 5166505 Gura_4274 Geobacter uraniireducens Rf4 twitching motility protein YP_001232990.1 4935923 D 351605 CDS YP_001232991.1 148266285 5166506 complement(4937015..4937770) 1 NC_009483.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 4937770 5166506 Gura_4275 Geobacter uraniireducens Rf4 type 11 methyltransferase YP_001232991.1 4937015 R 351605 CDS YP_001232992.1 148266286 5166134 complement(4937767..4938942) 1 NC_009483.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; glutamine--scyllo-inositol transaminase 4938942 5166134 Gura_4276 Geobacter uraniireducens Rf4 glutamine--scyllo-inositol transaminase YP_001232992.1 4937767 R 351605 CDS YP_001232993.1 148266287 5166135 complement(4938923..4939900) 1 NC_009483.1 PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein 4939900 5166135 Gura_4277 Geobacter uraniireducens Rf4 oxidoreductase domain-containing protein YP_001232993.1 4938923 R 351605 CDS YP_001232994.1 148266288 5166136 complement(4939996..4941441) 1 NC_009483.1 PFAM: NDP-hexose 2,3-dehydratase; NDP-hexose 2,3-dehydratase 4941441 5166136 Gura_4278 Geobacter uraniireducens Rf4 NDP-hexose 2,3-dehydratase YP_001232994.1 4939996 R 351605 CDS YP_001232995.1 148266289 5166091 complement(4941416..4942417) 1 NC_009483.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 4942417 5166091 Gura_4279 Geobacter uraniireducens Rf4 glycosyl transferase family protein YP_001232995.1 4941416 R 351605 CDS YP_001232996.1 148266290 5166092 complement(4942612..4942950) 1 NC_009483.1 hypothetical protein 4942950 5166092 Gura_4280 Geobacter uraniireducens Rf4 hypothetical protein YP_001232996.1 4942612 R 351605 CDS YP_001232997.1 148266291 5166620 4943813..4945204 1 NC_009483.1 TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; UbiD family decarboxylase 4945204 5166620 Gura_4281 Geobacter uraniireducens Rf4 UbiD family decarboxylase YP_001232997.1 4943813 D 351605 CDS YP_001232998.1 148266292 5166621 4945230..4946102 1 NC_009483.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase 4946102 ubiA 5166621 ubiA Geobacter uraniireducens Rf4 prenyltransferase YP_001232998.1 4945230 D 351605 CDS YP_001232999.1 148266293 5166519 4946099..4946713 1 NC_009483.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 4946713 5166519 Gura_4283 Geobacter uraniireducens Rf4 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_001232999.1 4946099 D 351605 CDS YP_001233000.1 148266294 5166520 4946760..4947842 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 4947842 5166520 Gura_4284 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001233000.1 4946760 D 351605 CDS YP_001233001.1 148266295 5166521 4947909..4949003 1 NC_009483.1 PFAM: Radical SAM domain protein; radical SAM domain-containing protein 4949003 5166521 Gura_4285 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001233001.1 4947909 D 351605 CDS YP_001233002.1 148266296 5166319 4949022..4950065 1 NC_009483.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase, class I and II; histidinol-phosphate aminotransferase 4950065 5166319 Gura_4286 Geobacter uraniireducens Rf4 histidinol-phosphate aminotransferase YP_001233002.1 4949022 D 351605 CDS YP_001233003.1 148266297 5166320 4950062..4951291 1 NC_009483.1 PFAM: HRDC domain protein; 3'-5' exonuclease; 3'-5' exonuclease 4951291 5166320 Gura_4287 Geobacter uraniireducens Rf4 3'-5' exonuclease YP_001233003.1 4950062 D 351605 CDS YP_001233004.1 148266298 5166321 complement(4951293..4952060) 1 NC_009483.1 hypothetical protein 4952060 5166321 Gura_4288 Geobacter uraniireducens Rf4 hypothetical protein YP_001233004.1 4951293 R 351605 CDS YP_001233005.1 148266299 5166013 complement(4952175..4952915) 1 NC_009483.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 4952915 5166013 Gura_4289 Geobacter uraniireducens Rf4 16S ribosomal RNA methyltransferase RsmE YP_001233005.1 4952175 R 351605 CDS YP_001233006.1 148266300 5166014 complement(4952916..4953863) 1 NC_009483.1 TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: methyltransferase small; ribosomal L11 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; 50S ribosomal protein L11 methyltransferase 4953863 5166014 Gura_4290 Geobacter uraniireducens Rf4 50S ribosomal protein L11 methyltransferase YP_001233006.1 4952916 R 351605 CDS YP_001233007.1 148266301 5166015 4954001..4955161 1 NC_009483.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 4955161 5166015 Gura_4291 Geobacter uraniireducens Rf4 amidohydrolase YP_001233007.1 4954001 D 351605 CDS YP_001233008.1 148266302 5165979 4955266..4956075 1 NC_009483.1 PFAM: protein of unknown function DUF299; hypothetical protein 4956075 5165979 Gura_4292 Geobacter uraniireducens Rf4 hypothetical protein YP_001233008.1 4955266 D 351605 CDS YP_001233009.1 148266303 5165980 4956150..4956824 1 NC_009483.1 PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 4956824 5165980 Gura_4293 Geobacter uraniireducens Rf4 two component transcriptional regulator YP_001233009.1 4956150 D 351605 CDS YP_001233010.1 148266304 5165981 4956829..4958238 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 4958238 5165981 Gura_4294 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001233010.1 4956829 D 351605 CDS YP_001233011.1 148266305 5166075 4958325..4959725 1 NC_009483.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 4959725 5166075 Gura_4295 Geobacter uraniireducens Rf4 protease Do YP_001233011.1 4958325 D 351605 CDS YP_001233012.1 148266306 5166076 complement(4959834..4961981) 1 NC_009483.1 TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; ATP-dependent DNA helicase RecQ 4961981 5166076 Gura_4296 Geobacter uraniireducens Rf4 ATP-dependent DNA helicase RecQ YP_001233012.1 4959834 R 351605 CDS YP_001233013.1 148266307 5166077 complement(4962046..4962378) 1 NC_009483.1 hypothetical protein 4962378 5166077 Gura_4297 Geobacter uraniireducens Rf4 hypothetical protein YP_001233013.1 4962046 R 351605 CDS YP_001233014.1 148266308 5166072 complement(4962414..4963037) 1 NC_009483.1 PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 4963037 5166072 Gura_4298 Geobacter uraniireducens Rf4 phospholipid/glycerol acyltransferase YP_001233014.1 4962414 R 351605 CDS YP_001233015.1 148266309 5166073 complement(4963038..4964279) 1 NC_009483.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; major facilitator transporter 4964279 5166073 Gura_4299 Geobacter uraniireducens Rf4 major facilitator transporter YP_001233015.1 4963038 R 351605 CDS YP_001233016.1 148266310 5166074 4964643..4966388 1 NC_009483.1 PFAM: AAA-4 family protein; putative transcriptional regulator 4966388 5166074 Gura_4300 Geobacter uraniireducens Rf4 putative transcriptional regulator YP_001233016.1 4964643 D 351605 CDS YP_001233017.1 148266311 5166808 4966999..4969380 1 NC_009483.1 PFAM: protein of unknown function DUF450; hypothetical protein 4969380 5166808 Gura_4301 Geobacter uraniireducens Rf4 hypothetical protein YP_001233017.1 4966999 D 351605 CDS YP_001233018.1 148266312 5166809 complement(4969645..4970673) 1 NC_009483.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 4970673 5166809 Gura_4302 Geobacter uraniireducens Rf4 3-deoxy-7-phosphoheptulonate synthase YP_001233018.1 4969645 R 351605 CDS YP_001233019.1 148266313 5166810 4970857..4971141 1 NC_009483.1 hypothetical protein 4971141 5166810 Gura_4303 Geobacter uraniireducens Rf4 hypothetical protein YP_001233019.1 4970857 D 351605 CDS YP_001233020.1 148266314 5164585 4971225..4971497 1 NC_009483.1 hypothetical protein 4971497 5164585 Gura_4304 Geobacter uraniireducens Rf4 hypothetical protein YP_001233020.1 4971225 D 351605 CDS YP_001233021.1 148266315 5164586 4971497..4972060 1 NC_009483.1 hypothetical protein 4972060 5164586 Gura_4305 Geobacter uraniireducens Rf4 hypothetical protein YP_001233021.1 4971497 D 351605 CDS YP_001233022.1 148266316 5164587 4972259..4972549 1 NC_009483.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 4972549 groES 5164587 groES Geobacter uraniireducens Rf4 co-chaperonin GroES YP_001233022.1 4972259 D 351605 CDS YP_001233023.1 148266317 5163958 4972593..4974242 1 NC_009483.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 4974242 groEL 5163958 groEL Geobacter uraniireducens Rf4 chaperonin GroEL YP_001233023.1 4972593 D 351605 CDS YP_001233024.1 148266318 5163959 4974467..4976527 1 NC_009483.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; putative serine protein kinase PrkA 4976527 5163959 Gura_4308 Geobacter uraniireducens Rf4 putative serine protein kinase PrkA YP_001233024.1 4974467 D 351605 CDS YP_001233025.1 148266319 5163960 4976550..4977917 1 NC_009483.1 hypothetical protein 4977917 5163960 Gura_4309 Geobacter uraniireducens Rf4 hypothetical protein YP_001233025.1 4976550 D 351605 CDS YP_001233026.1 148266320 5164154 4977979..4979628 1 NC_009483.1 hypothetical protein 4979628 5164154 Gura_4310 Geobacter uraniireducens Rf4 hypothetical protein YP_001233026.1 4977979 D 351605 CDS YP_001233027.1 148266321 5164155 4979629..4981941 1 NC_009483.1 SMART: PrkA AAA domain protein; putative serine protein kinase PrkA 4981941 5164155 Gura_4311 Geobacter uraniireducens Rf4 putative serine protein kinase PrkA YP_001233027.1 4979629 D 351605 CDS YP_001233028.1 148266322 5164156 complement(4981956..4983773) 1 NC_009483.1 PFAM: K+ potassium transporter; K+ potassium transporter 4983773 5164156 Gura_4312 Geobacter uraniireducens Rf4 K+ potassium transporter YP_001233028.1 4981956 R 351605 CDS YP_001233029.1 148266323 5163372 4983929..4986703 1 NC_009483.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 4986703 ileS 5163372 ileS Geobacter uraniireducens Rf4 isoleucyl-tRNA synthetase YP_001233029.1 4983929 D 351605 CDS YP_001233030.1 148266324 5163373 4986731..4987222 1 NC_009483.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 4987222 lspA 5163373 lspA Geobacter uraniireducens Rf4 lipoprotein signal peptidase YP_001233030.1 4986731 D 351605 CDS YP_001233031.1 148266325 5163374 complement(4987773..4988948) 1 NC_009483.1 hypothetical protein 4988948 5163374 Gura_4315 Geobacter uraniireducens Rf4 hypothetical protein YP_001233031.1 4987773 R 351605 CDS YP_001233032.1 148266326 5163144 complement(4989054..4989347) 1 NC_009483.1 hypothetical protein 4989347 5163144 Gura_4316 Geobacter uraniireducens Rf4 hypothetical protein YP_001233032.1 4989054 R 351605 CDS YP_001233033.1 148266327 5163145 complement(4989448..4990455) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein 4990455 5163145 Gura_4317 Geobacter uraniireducens Rf4 putative PAS/PAC sensor protein YP_001233033.1 4989448 R 351605 CDS YP_001233034.1 148266328 5163146 complement(4990474..4990734) 1 NC_009483.1 hypothetical protein 4990734 5163146 Gura_4318 Geobacter uraniireducens Rf4 hypothetical protein YP_001233034.1 4990474 R 351605 CDS YP_001233035.1 148266329 5163061 complement(4990789..4991853) 1 NC_009483.1 PFAM: protein of unknown function DUF395, YeeE/YedE; hypothetical protein 4991853 5163061 Gura_4319 Geobacter uraniireducens Rf4 hypothetical protein YP_001233035.1 4990789 R 351605 CDS YP_001233036.1 148266330 5163062 complement(4991934..4992320) 1 NC_009483.1 PFAM: thioesterase superfamily protein; thioesterase superfamily protein 4992320 5163062 Gura_4320 Geobacter uraniireducens Rf4 thioesterase superfamily protein YP_001233036.1 4991934 R 351605 CDS YP_001233037.1 148266331 5163063 complement(4992362..4995538) 1 NC_009483.1 PFAM: glutamate-ammonia ligase adenylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 4995538 5163063 Gura_4321 Geobacter uraniireducens Rf4 (glutamate--ammonia-ligase) adenylyltransferase YP_001233037.1 4992362 R 351605 CDS YP_001233038.1 148266332 5162795 complement(4995535..4996575) 1 NC_009483.1 TIGRFAM: putative translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; aIF-2BI family translation initiation factor 4996575 5162795 Gura_4322 Geobacter uraniireducens Rf4 aIF-2BI family translation initiation factor YP_001233038.1 4995535 R 351605 CDS YP_001233039.1 148266333 5162796 complement(4996678..4998117) 1 NC_009483.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 4998117 gatB 5162796 gatB Geobacter uraniireducens Rf4 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_001233039.1 4996678 R 351605 CDS YP_001233040.1 148266334 5162797 complement(4998168..4999625) 1 NC_009483.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 4999625 gatA 5162797 gatA Geobacter uraniireducens Rf4 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_001233040.1 4998168 R 351605 CDS YP_001233041.1 148266335 5166340 complement(4999804..5000091) 1 NC_009483.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase, C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C 5000091 5166340 Gura_4325 Geobacter uraniireducens Rf4 glutamyl-tRNA(Gln) amidotransferase subunit C YP_001233041.1 4999804 R 351605 CDS YP_001233042.1 148266336 5166341 complement(5000239..5002473) 1 NC_009483.1 PFAM: UvrD/REP helicase; UvrD/REP helicase 5002473 5166341 Gura_4326 Geobacter uraniireducens Rf4 UvrD/REP helicase YP_001233042.1 5000239 R 351605 CDS YP_001233043.1 148266337 5163789 5003029..5004768 1 NC_009483.1 TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 5004768 5163789 Gura_4327 Geobacter uraniireducens Rf4 DNA polymerase III subunits gamma and tau YP_001233043.1 5003029 D 351605 CDS YP_001233044.1 148266338 5164970 5004840..5005154 1 NC_009483.1 PFAM: conserved hypothetical protein 103; hypothetical protein 5005154 5164970 Gura_4328 Geobacter uraniireducens Rf4 hypothetical protein YP_001233044.1 5004840 D 351605 CDS YP_001233045.1 148266339 5164971 5005332..5005925 1 NC_009483.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 5005925 recR 5164971 recR Geobacter uraniireducens Rf4 recombination protein RecR YP_001233045.1 5005332 D 351605 CDS YP_001233046.1 148266340 5162964 5006003..5009590 1 NC_009483.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 5009590 5162964 Gura_4330 Geobacter uraniireducens Rf4 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_001233046.1 5006003 D 351605 CDS YP_001233047.1 148266341 5162965 5009784..5010275 1 NC_009483.1 PFAM: Roadblock/LC7 family protein; roadblock/LC7 family protein 5010275 5162965 Gura_4331 Geobacter uraniireducens Rf4 roadblock/LC7 family protein YP_001233047.1 5009784 D 351605 CDS YP_001233048.1 148266342 5162966 5010296..5010883 1 NC_009483.1 GTPase-like protein 5010883 5162966 Gura_4332 Geobacter uraniireducens Rf4 GTPase-like protein YP_001233048.1 5010296 D 351605 CDS YP_001233049.1 148266343 5162745 complement(5010983..5012347) 1 NC_009483.1 PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein 5012347 5162745 Gura_4333 Geobacter uraniireducens Rf4 OmpA/MotB domain-containing protein YP_001233049.1 5010983 R 351605 CDS YP_001233050.1 148266344 5162746 complement(5012669..5016178) 1 NC_009483.1 PFAM: protein of unknown function DUF748; hypothetical protein 5016178 5162746 Gura_4334 Geobacter uraniireducens Rf4 hypothetical protein YP_001233050.1 5012669 R 351605 CDS YP_001233051.1 148266345 5162747 complement(5016209..5017705) 1 NC_009483.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 5017705 5162747 Gura_4335 Geobacter uraniireducens Rf4 radical SAM domain-containing protein YP_001233051.1 5016209 R 351605 CDS YP_001233052.1 148266346 5166384 5018110..5018622 1 NC_009483.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5018622 5166384 Gura_4336 Geobacter uraniireducens Rf4 N-acetyltransferase GCN5 YP_001233052.1 5018110 D 351605 CDS YP_001233053.1 148266347 5166385 5018619..5019758 1 NC_009483.1 PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase M20 5019758 5166385 Gura_4337 Geobacter uraniireducens Rf4 peptidase M20 YP_001233053.1 5018619 D 351605 CDS YP_001233054.1 148266348 5166386 complement(5020204..5020461) 1 NC_009483.1 hypothetical protein 5020461 5166386 Gura_4338 Geobacter uraniireducens Rf4 hypothetical protein YP_001233054.1 5020204 R 351605 CDS YP_001233055.1 148266349 5162736 complement(5020596..5021102) 1 NC_009483.1 hypothetical protein 5021102 5162736 Gura_4339 Geobacter uraniireducens Rf4 hypothetical protein YP_001233055.1 5020596 R 351605 CDS YP_001233056.1 148266350 5162737 complement(5021149..5030214) 1 NC_009483.1 PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; glycosyltransferase 5030214 5162737 Gura_4340 Geobacter uraniireducens Rf4 glycosyltransferase YP_001233056.1 5021149 R 351605 CDS YP_001233057.1 148266351 5162738 5030908..5031255 1 NC_009483.1 hypothetical protein 5031255 5162738 Gura_4341 Geobacter uraniireducens Rf4 hypothetical protein YP_001233057.1 5030908 D 351605 CDS YP_001233058.1 148266352 5165788 complement(5031679..5031996) 1 NC_009483.1 hypothetical protein 5031996 5165788 Gura_4342 Geobacter uraniireducens Rf4 hypothetical protein YP_001233058.1 5031679 R 351605 CDS YP_001233059.1 148266353 5164054 complement(5031981..5032370) 1 NC_009483.1 hypothetical protein 5032370 5164054 Gura_4343 Geobacter uraniireducens Rf4 hypothetical protein YP_001233059.1 5031981 R 351605 CDS YP_001233060.1 148266354 5164055 5032697..5033230 1 NC_009483.1 hypothetical protein 5033230 5164055 Gura_4344 Geobacter uraniireducens Rf4 hypothetical protein YP_001233060.1 5032697 D 351605 CDS YP_001233061.1 148266355 5164056 5033227..5034252 1 NC_009483.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 5034252 5164056 Gura_4345 Geobacter uraniireducens Rf4 integrase catalytic subunit YP_001233061.1 5033227 D 351605 CDS YP_001233062.1 148266356 5165280 complement(5034601..5035392) 1 NC_009483.1 PFAM: regulatory protein, IclR; regulatory protein IclR 5035392 5165280 Gura_4346 Geobacter uraniireducens Rf4 regulatory protein IclR YP_001233062.1 5034601 R 351605 CDS YP_001233063.1 148266357 5165281 complement(5035488..5035667) 1 NC_009483.1 hypothetical protein 5035667 5165281 Gura_4347 Geobacter uraniireducens Rf4 hypothetical protein YP_001233063.1 5035488 R 351605 CDS YP_001233064.1 148266358 5165282 complement(5035796..5036671) 1 NC_009483.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit alpha 5036671 5165282 Gura_4348 Geobacter uraniireducens Rf4 succinyl-CoA synthetase subunit alpha YP_001233064.1 5035796 R 351605 CDS YP_001233065.1 148266359 5164812 complement(5036688..5037851) 1 NC_009483.1 TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; succinyl-CoA synthetase subunit beta 5037851 5164812 Gura_4349 Geobacter uraniireducens Rf4 succinyl-CoA synthetase subunit beta YP_001233065.1 5036688 R 351605 CDS YP_001233066.1 148266360 5164813 complement(5038163..5038543) 1 NC_009483.1 hypothetical protein 5038543 5164813 Gura_4350 Geobacter uraniireducens Rf4 hypothetical protein YP_001233066.1 5038163 R 351605 CDS YP_001233067.1 148266361 5164814 complement(5038610..5039485) 1 NC_009483.1 hypothetical protein 5039485 5164814 Gura_4351 Geobacter uraniireducens Rf4 hypothetical protein YP_001233067.1 5038610 R 351605 CDS YP_001233068.1 148266362 5163952 complement(5039574..5040638) 1 NC_009483.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 5040638 5163952 Gura_4352 Geobacter uraniireducens Rf4 alcohol dehydrogenase YP_001233068.1 5039574 R 351605 CDS YP_001233069.1 148266363 5163953 complement(5040726..5040977) 1 NC_009483.1 hypothetical protein 5040977 5163953 Gura_4353 Geobacter uraniireducens Rf4 hypothetical protein YP_001233069.1 5040726 R 351605 CDS YP_001233070.1 148266364 5163954 complement(5040952..5042115) 1 NC_009483.1 PFAM: Thiolase; thiolase 5042115 5163954 Gura_4354 Geobacter uraniireducens Rf4 thiolase YP_001233070.1 5040952 R 351605 CDS YP_001233071.1 148266365 5163811 complement(5042137..5042793) 1 NC_009483.1 TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 5042793 5163811 Gura_4355 Geobacter uraniireducens Rf4 3-oxoacid CoA-transferase subunit B YP_001233071.1 5042137 R 351605 CDS YP_001233072.1 148266366 5163812 complement(5042806..5043495) 1 NC_009483.1 TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 5043495 5163812 Gura_4356 Geobacter uraniireducens Rf4 3-oxoacid CoA-transferase subunit A YP_001233072.1 5042806 R 351605 CDS YP_001233073.1 148266367 5163813 complement(5043525..5044784) 1 NC_009483.1 PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; cobalamin synthesis protein, P47K 5044784 5163813 Gura_4357 Geobacter uraniireducens Rf4 cobalamin synthesis protein, P47K YP_001233073.1 5043525 R 351605 CDS YP_001233074.1 148266368 5164202 complement(5045164..5046039) 1 NC_009483.1 hypothetical protein 5046039 5164202 Gura_4358 Geobacter uraniireducens Rf4 hypothetical protein YP_001233074.1 5045164 R 351605 CDS YP_001233075.1 148266369 5164203 complement(5046036..5048312) 1 NC_009483.1 PFAM: Hydantoinase B/oxoprolinase; hydantoinase B/oxoprolinase 5048312 5164203 Gura_4359 Geobacter uraniireducens Rf4 hydantoinase B/oxoprolinase YP_001233075.1 5046036 R 351605 CDS YP_001233076.1 148266370 5164204 complement(5048360..5050486) 1 NC_009483.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; 5-oxoprolinase 5050486 5164204 Gura_4360 Geobacter uraniireducens Rf4 5-oxoprolinase YP_001233076.1 5048360 R 351605 CDS YP_001233077.1 148266371 5164026 complement(5050577..5050975) 1 NC_009483.1 hypothetical protein 5050975 5164026 Gura_4361 Geobacter uraniireducens Rf4 hypothetical protein YP_001233077.1 5050577 R 351605 CDS YP_001233078.1 148266372 5164027 complement(5050980..5052911) 1 NC_009483.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; 5-oxoprolinase 5052911 5164027 Gura_4362 Geobacter uraniireducens Rf4 5-oxoprolinase YP_001233078.1 5050980 R 351605 CDS YP_001233079.1 148266373 5164028 5053675..5055636 1 NC_009483.1 PFAM: helix-turn-helix- domain containing protein, AraC type; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; SMART: AAA ATPase; Fis family GAF modulated sigma54 specific transcriptional regulator 5055636 5164028 Gura_4363 Geobacter uraniireducens Rf4 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001233079.1 5053675 D 351605 CDS YP_001233080.1 148266374 5166887 5055858..5057411 1 NC_009483.1 PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Cache, type 2 domain protein; integral membrane sensor signal transduction histidine kinase 5057411 5166887 Gura_4364 Geobacter uraniireducens Rf4 integral membrane sensor signal transduction histidine kinase YP_001233080.1 5055858 D 351605 CDS YP_001233081.1 148266375 5166888 5057514..5058536 1 NC_009483.1 PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; response regulator receiver protein 5058536 5166888 Gura_4365 Geobacter uraniireducens Rf4 response regulator receiver protein YP_001233081.1 5057514 D 351605 CDS YP_001233082.1 148266376 5166889 5058641..5059174 1 NC_009483.1 hypothetical protein 5059174 5166889 Gura_4366 Geobacter uraniireducens Rf4 hypothetical protein YP_001233082.1 5058641 D 351605 CDS YP_001233083.1 148266377 5166959 5059171..5060196 1 NC_009483.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 5060196 5166959 Gura_4367 Geobacter uraniireducens Rf4 integrase catalytic subunit YP_001233083.1 5059171 D 351605 CDS YP_001233084.1 148266378 5166960 complement(5060485..5060856) 1 NC_009483.1 hypothetical protein 5060856 5166960 Gura_4368 Geobacter uraniireducens Rf4 hypothetical protein YP_001233084.1 5060485 R 351605 CDS YP_001233085.1 148266379 5166961 complement(5060912..5062003) 1 NC_009483.1 PFAM: aldo/keto reductase; aldo/keto reductase 5062003 5166961 Gura_4369 Geobacter uraniireducens Rf4 aldo/keto reductase YP_001233085.1 5060912 R 351605 CDS YP_001233086.1 148266380 5166956 complement(5062035..5063198) 1 NC_009483.1 PFAM: Carboxymuconolactone decarboxylase; Cupin 2, conserved barrel domain protein; cupin 2 domain-containing protein 5063198 5166956 Gura_4370 Geobacter uraniireducens Rf4 cupin 2 domain-containing protein YP_001233086.1 5062035 R 351605 CDS YP_001233087.1 148266381 5166957 complement(5063215..5064327) 1 NC_009483.1 hypothetical protein 5064327 5166957 Gura_4371 Geobacter uraniireducens Rf4 hypothetical protein YP_001233087.1 5063215 R 351605 CDS YP_001233088.1 148266382 5166958 complement(5064324..5065397) 1 NC_009483.1 alpha/beta fold family hydrolase-like protein 5065397 5166958 Gura_4372 Geobacter uraniireducens Rf4 alpha/beta fold family hydrolase-like protein YP_001233088.1 5064324 R 351605 CDS YP_001233089.1 148266383 5166310 complement(5065424..5066275) 1 NC_009483.1 PFAM: aldo/keto reductase; 2,5-didehydrogluconate reductase 5066275 5166310 Gura_4373 Geobacter uraniireducens Rf4 2,5-didehydrogluconate reductase YP_001233089.1 5065424 R 351605 CDS YP_001233090.1 148266384 5166311 complement(5066310..5067314) 1 NC_009483.1 PFAM: aldo/keto reductase; aldo/keto reductase 5067314 5166311 Gura_4374 Geobacter uraniireducens Rf4 aldo/keto reductase YP_001233090.1 5066310 R 351605 CDS YP_001233091.1 148266385 5166312 5067486..5068424 1 NC_009483.1 PFAM: helix-turn-helix- domain containing protein, AraC type; AraC-type transcriptional regulator domain protein; AraC-like transcriptional regulator 5068424 5166312 Gura_4375 Geobacter uraniireducens Rf4 AraC-like transcriptional regulator YP_001233091.1 5067486 D 351605 CDS YP_001233092.1 148266386 5167016 5068901..5069806 1 NC_009483.1 PFAM: Rhodanese domain protein; rhodanese domain-containing protein 5069806 5167016 Gura_4376 Geobacter uraniireducens Rf4 rhodanese domain-containing protein YP_001233092.1 5068901 D 351605 CDS YP_001233093.1 148266387 5167017 complement(5069807..5071717) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 5071717 5167017 Gura_4377 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001233093.1 5069807 R 351605 CDS YP_001233094.1 148266388 5167018 complement(5071719..5074040) 1 NC_009483.1 TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 5074040 5167018 Gura_4378 Geobacter uraniireducens Rf4 multi-sensor signal transduction histidine kinase YP_001233094.1 5071719 R 351605 CDS YP_001233095.1 148266389 5166212 complement(5074417..5077305) 1 NC_009483.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; excinuclease ABC subunit A 5077305 5166212 Gura_4379 Geobacter uraniireducens Rf4 excinuclease ABC subunit A YP_001233095.1 5074417 R 351605 CDS YP_001233096.1 148266390 5166213 complement(5077598..5077798) 1 NC_009483.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 5077798 5166213 Gura_4380 Geobacter uraniireducens Rf4 cold-shock DNA-binding domain-containing protein YP_001233096.1 5077598 R 351605 CDS YP_001233097.1 148266391 5166214 complement(5077907..5079316) 1 NC_009483.1 PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase 5079316 5166214 Gura_4381 Geobacter uraniireducens Rf4 phosphoglucomutase YP_001233097.1 5077907 R 351605 CDS YP_001233098.1 148266392 5166125 5079615..5080217 1 NC_009483.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 5080217 5166125 Gura_4382 Geobacter uraniireducens Rf4 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001233098.1 5079615 D 351605 CDS YP_001233099.1 148266393 5166126 complement(5080344..5081051) 1 NC_009483.1 hypothetical protein 5081051 5166126 Gura_4383 Geobacter uraniireducens Rf4 hypothetical protein YP_001233099.1 5080344 R 351605 CDS YP_001233100.1 148266394 5166127 complement(5081113..5081832) 1 NC_009483.1 PFAM: cytochrome c assembly protein; cytochrome c assembly protein 5081832 5166127 Gura_4384 Geobacter uraniireducens Rf4 cytochrome c assembly protein YP_001233100.1 5081113 R 351605 CDS YP_001233101.1 148266395 5167001 complement(5081865..5082371) 1 NC_009483.1 TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 5082371 5167001 Gura_4385 Geobacter uraniireducens Rf4 peptide deformylase YP_001233101.1 5081865 R 351605 CDS YP_001233102.1 148266396 5167002 complement(5082376..5082942) 1 NC_009483.1 PFAM: amino acid-binding ACT domain protein; amino acid-binding ACT domain-containing protein 5082942 5167002 Gura_4386 Geobacter uraniireducens Rf4 amino acid-binding ACT domain-containing protein YP_001233102.1 5082376 R 351605 CDS YP_001233103.1 148266397 5167003 complement(5083110..5083619) 1 NC_009483.1 hypothetical protein 5083619 5167003 Gura_4387 Geobacter uraniireducens Rf4 hypothetical protein YP_001233103.1 5083110 R 351605 CDS YP_001233104.1 148266398 5166468 complement(5083595..5084662) 1 NC_009483.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; helix-turn-helix domain-containing protein 5084662 5166468 Gura_4388 Geobacter uraniireducens Rf4 helix-turn-helix domain-containing protein YP_001233104.1 5083595 R 351605 CDS YP_001233105.1 148266399 5166469 complement(5085422..5087998) 1 NC_009483.1 PFAM: type III restriction enzyme, res subunit; type III restriction enzyme, res subunit 5087998 5166469 Gura_4389 Geobacter uraniireducens Rf4 type III restriction enzyme, res subunit YP_001233105.1 5085422 R 351605 CDS YP_001233106.1 148266400 5166470 complement(5088184..5089779) 1 NC_009483.1 PFAM: DNA methylase N-4/N-6 domain protein; adenine-specific DNA-methyltransferase 5089779 5166470 Gura_4390 Geobacter uraniireducens Rf4 adenine-specific DNA-methyltransferase YP_001233106.1 5088184 R 351605 CDS YP_001233107.1 148266401 5166929 complement(5090154..5090633) 1 NC_009483.1 hypothetical protein 5090633 5166929 Gura_4391 Geobacter uraniireducens Rf4 hypothetical protein YP_001233107.1 5090154 R 351605 CDS YP_001233108.1 148266402 5166930 complement(5090749..5093022) 1 NC_009483.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; cell division protein FtsK 5093022 5166930 Gura_4392 Geobacter uraniireducens Rf4 cell division protein FtsK YP_001233108.1 5090749 R 351605 CDS YP_001233109.1 148266403 5166931 complement(5093106..5094782) 1 NC_009483.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; beta-lactamase domain-containing protein 5094782 5166931 Gura_4393 Geobacter uraniireducens Rf4 beta-lactamase domain-containing protein YP_001233109.1 5093106 R 351605 CDS YP_001233110.1 148266404 5166902 complement(5095007..5095405) 1 NC_009483.1 hypothetical protein 5095405 5166902 Gura_4394 Geobacter uraniireducens Rf4 hypothetical protein YP_001233110.1 5095007 R 351605 CDS YP_001233111.1 148266405 5166903 complement(5095413..5095625) 1 NC_009483.1 hypothetical protein 5095625 5166903 Gura_4395 Geobacter uraniireducens Rf4 hypothetical protein YP_001233111.1 5095413 R 351605 CDS YP_001233112.1 148266406 5166904 complement(5095600..5096298) 1 NC_009483.1 TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 5096298 5166904 Gura_4396 Geobacter uraniireducens Rf4 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_001233112.1 5095600 R 351605 CDS YP_001233113.1 148266407 5163735 5096447..5096896 1 NC_009483.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein 5096896 5163735 Gura_4397 Geobacter uraniireducens Rf4 single-strand binding protein YP_001233113.1 5096447 D 351605 CDS YP_001233114.1 148266408 5163736 5097068..5097196 1 NC_009483.1 hypothetical protein 5097196 5163736 Gura_4398 Geobacter uraniireducens Rf4 hypothetical protein YP_001233114.1 5097068 D 351605 CDS YP_001233115.1 148266409 5163737 5097248..5097343 1 NC_009483.1 hypothetical protein 5097343 5163737 Gura_4399 Geobacter uraniireducens Rf4 hypothetical protein YP_001233115.1 5097248 D 351605 CDS YP_001233116.1 148266410 5163796 5097347..5098708 1 NC_009483.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 5098708 5163796 Gura_4400 Geobacter uraniireducens Rf4 MATE efflux family protein YP_001233116.1 5097347 D 351605 CDS YP_001233117.1 148266411 5163797 complement(5098813..5100900) 1 NC_009483.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5100900 5163797 Gura_4401 Geobacter uraniireducens Rf4 methyl-accepting chemotaxis sensory transducer YP_001233117.1 5098813 R 351605 CDS YP_001233118.1 148266412 5163798 complement(5101211..5104705) 1 NC_009483.1 PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases-like; non-specific serine/threonine protein kinase 5104705 5163798 Gura_4402 Geobacter uraniireducens Rf4 non-specific serine/threonine protein kinase YP_001233118.1 5101211 R 351605 CDS YP_001233119.1 148266413 5163837 5104823..5105740 1 NC_009483.1 PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 5105740 5163837 Gura_4403 Geobacter uraniireducens Rf4 hypothetical protein YP_001233119.1 5104823 D 351605 CDS YP_001233120.1 148266414 5163838 complement(5105796..5106908) 1 NC_009483.1 hypothetical protein 5106908 5163838 Gura_4404 Geobacter uraniireducens Rf4 hypothetical protein YP_001233120.1 5105796 R 351605 CDS YP_001233121.1 148266415 5163839 complement(5106924..5108453) 1 NC_009483.1 hypothetical protein 5108453 5163839 Gura_4405 Geobacter uraniireducens Rf4 hypothetical protein YP_001233121.1 5106924 R 351605 CDS YP_001233122.1 148266416 5163265 5108690..5111146 1 NC_009483.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; 1A family penicillin-binding protein 5111146 5163265 Gura_4406 Geobacter uraniireducens Rf4 1A family penicillin-binding protein YP_001233122.1 5108690 D 351605 CDS YP_001233123.1 148266417 5163266 5111386..5111670 1 NC_009483.1 PFAM: histone family protein DNA-binding protein; histone family protein DNA-binding protein 5111670 5163266 Gura_4407 Geobacter uraniireducens Rf4 histone family protein DNA-binding protein YP_001233123.1 5111386 D 351605 CDS YP_001233124.1 148266418 5163267 5111936..5112271 1 NC_009483.1 hypothetical protein 5112271 5163267 Gura_4408 Geobacter uraniireducens Rf4 hypothetical protein YP_001233124.1 5111936 D 351605 CDS YP_001233125.1 148266419 5162813 5112275..5113717 1 NC_009483.1 PFAM: pyruvate kinase; pyruvate kinase 5113717 5162813 Gura_4409 Geobacter uraniireducens Rf4 pyruvate kinase YP_001233125.1 5112275 D 351605 CDS YP_001233126.1 148266420 5162814 5113729..5114853 1 NC_009483.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 5114853 5162814 Gura_4410 Geobacter uraniireducens Rf4 NADH:flavin oxidoreductase YP_001233126.1 5113729 D 351605 CDS YP_001233127.1 148266421 5162815 5114909..5115814 1 NC_009483.1 PFAM: Auxin Efflux Carrier; auxin efflux carrier 5115814 5162815 Gura_4411 Geobacter uraniireducens Rf4 auxin efflux carrier YP_001233127.1 5114909 D 351605 CDS YP_001233128.1 148266422 5164894 complement(5115851..5117434) 1 NC_009483.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 5117434 prfC 5164894 prfC Geobacter uraniireducens Rf4 peptide chain release factor 3 YP_001233128.1 5115851 R 351605 CDS YP_001233129.1 148266423 5164895 5117868..5118629 1 NC_009483.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; TatD family hydrolase 5118629 5164895 Gura_4413 Geobacter uraniireducens Rf4 TatD family hydrolase YP_001233129.1 5117868 D 351605 CDS YP_001233130.1 148266424 5164896 5118706..5119476 1 NC_009483.1 PFAM: UBA/THIF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 5119476 5164896 Gura_4414 Geobacter uraniireducens Rf4 UBA/THIF-type NAD/FAD binding protein YP_001233130.1 5118706 D 351605 CDS YP_001233131.1 148266425 5165044 5119566..5120063 1 NC_009483.1 PFAM: Rubrerythrin; rubrerythrin 5120063 5165044 Gura_4415 Geobacter uraniireducens Rf4 rubrerythrin YP_001233131.1 5119566 D 351605 CDS YP_001233132.1 148266426 5165045 5120060..5120362 1 NC_009483.1 hypothetical protein 5120362 5165045 Gura_4416 Geobacter uraniireducens Rf4 hypothetical protein YP_001233132.1 5120060 D 351605 CDS YP_001233133.1 148266427 5165046 complement(5120628..5121383) 1 NC_009483.1 PFAM: Lytic transglycosylase, catalytic; lytic transglycosylase 5121383 5165046 Gura_4417 Geobacter uraniireducens Rf4 lytic transglycosylase YP_001233133.1 5120628 R 351605 CDS YP_001233134.1 148266428 5165467 complement(5121392..5122792) 1 NC_009483.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 5122792 5165467 Gura_4418 Geobacter uraniireducens Rf4 two component sigma-54 specific Fis family transcriptional regulator YP_001233134.1 5121392 R 351605 CDS YP_001233135.1 148266429 5165468 5123130..5123627 1 NC_009483.1 PFAM: CheW domain protein; putative CheW protein 5123627 5165468 Gura_4419 Geobacter uraniireducens Rf4 putative CheW protein YP_001233135.1 5123130 D 351605 CDS YP_001233136.1 148266430 5165469 5123683..5125479 1 NC_009483.1 PFAM: CheW domain protein; ATP-binding region, ATPase domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; CheA signal transduction histidine kinase 5125479 5165469 Gura_4420 Geobacter uraniireducens Rf4 CheA signal transduction histidine kinase YP_001233136.1 5123683 D 351605 CDS YP_001233137.1 148266431 5165931 5125554..5126387 1 NC_009483.1 PFAM: MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase 5126387 5165931 Gura_4421 Geobacter uraniireducens Rf4 protein-glutamate O-methyltransferase YP_001233137.1 5125554 D 351605 CDS YP_001233138.1 148266432 5165932 5126399..5127301 1 NC_009483.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; HDOD; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 5127301 5165932 Gura_4422 Geobacter uraniireducens Rf4 metal dependent phosphohydrolase YP_001233138.1 5126399 D 351605 CDS YP_001233139.1 148266433 5165933 5127307..5128380 1 NC_009483.1 PFAM: CheB methylesterase; response regulator receiver; response regulator receiver modulated CheB methylesterase 5128380 5165933 Gura_4423 Geobacter uraniireducens Rf4 response regulator receiver modulated CheB methylesterase YP_001233139.1 5127307 D 351605 CDS YP_001233140.1 148266434 5165646 complement(5128384..5128707) 1 NC_009483.1 hypothetical protein 5128707 5165646 Gura_4424 Geobacter uraniireducens Rf4 hypothetical protein YP_001233140.1 5128384 R 351605 CDS YP_001233141.1 148266435 5165647 complement(5128774..5129505) 1 NC_009483.1 hypothetical protein 5129505 5165647 Gura_4425 Geobacter uraniireducens Rf4 hypothetical protein YP_001233141.1 5128774 R 351605 CDS YP_001233142.1 148266436 5165648 complement(5129762..5130421) 1 NC_009483.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; methyltransferase GidB 5130421 5165648 Gura_4426 Geobacter uraniireducens Rf4 methyltransferase GidB YP_001233142.1 5129762 R 351605 CDS YP_001233143.1 148266437 5163162 complement(5130418..5132292) 1 NC_009483.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 5132292 5163162 Gura_4427 Geobacter uraniireducens Rf4 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_001233143.1 5130418 R 351605 CDS YP_001233144.1 148266438 5163163 complement(5132417..5133784) 1 NC_009483.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 5133784 trmE 5163163 trmE Geobacter uraniireducens Rf4 tRNA modification GTPase TrmE YP_001233144.1 5132417 R 351605 CDS YP_001233145.1 148266439 5163164 complement(5133809..5135395) 1 NC_009483.1 PFAM: 60 kDa inner membrane insertion protein; 60 kDa inner membrane insertion protein 5135395 5163164 Gura_4429 Geobacter uraniireducens Rf4 60 kDa inner membrane insertion protein YP_001233145.1 5133809 R 351605 CDS YP_001233146.1 148266440 5166501 complement(5135416..5135628) 1 NC_009483.1 PFAM: protein of unknown function DUF37; hypothetical protein 5135628 5166501 Gura_4430 Geobacter uraniireducens Rf4 hypothetical protein YP_001233146.1 5135416 R 351605 CDS YP_001233147.1 148266441 5166502 complement(5135630..5135971) 1 NC_009483.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 5135971 rnpA 5166502 rnpA Geobacter uraniireducens Rf4 ribonuclease P YP_001233147.1 5135630 R 351605 CDS YP_001233148.1 148266442 5166503 complement(5135978..5136127) 1 NC_009483.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 5136127 rpmH 5166503 rpmH Geobacter uraniireducens Rf4 50S ribosomal protein L34 YP_001233148.1 5135978 R 351605 CDS