-- dump date 20140619_102551 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 351605000001 SEQ_END SEQ_END NC_009483.1 5136364 5136364 DR NC_009483.1; contig end 5136364..5136364 Geobacter uraniireducens Rf4 YP_001228792.1 CDS dnaA NC_009483.1 46 1395 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 46..1395 Geobacter uraniireducens Rf4 5163840 YP_001228793.1 CDS Gura_0002 NC_009483.1 1611 2729 D TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain; DNA polymerase III subunit beta 1611..2729 Geobacter uraniireducens Rf4 5166118 YP_001228794.1 CDS recF NC_009483.1 2810 3904 D Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 2810..3904 Geobacter uraniireducens Rf4 5164517 YP_001228795.1 CDS Gura_0004 NC_009483.1 3913 6297 D TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein; TOPRIM domain protein; DNA topoisomerase, type IIA, subunit B, region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B 3913..6297 Geobacter uraniireducens Rf4 5164518 YP_001228796.1 CDS Gura_0005 NC_009483.1 6355 8853 D TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; DNA gyrase subunit A 6355..8853 Geobacter uraniireducens Rf4 5164519 YP_001228797.1 CDS Gura_0006 NC_009483.1 8937 10517 D hypothetical protein 8937..10517 Geobacter uraniireducens Rf4 5164520 YP_001228798.1 CDS gpsA NC_009483.1 10587 11600 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 10587..11600 Geobacter uraniireducens Rf4 5163642 YP_001228799.1 CDS Gura_0008 NC_009483.1 11698 13974 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 11698..13974 Geobacter uraniireducens Rf4 5163643 YP_001228800.1 CDS Gura_0009 NC_009483.1 13961 15487 D TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 13961..15487 Geobacter uraniireducens Rf4 5163644 YP_001228801.1 CDS Gura_0010 NC_009483.1 15519 17333 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 15519..17333 Geobacter uraniireducens Rf4 5163645 YP_001228802.1 CDS Gura_0011 NC_009483.1 17330 19510 D TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 17330..19510 Geobacter uraniireducens Rf4 5164066 YP_001228803.1 CDS Gura_0012 NC_009483.1 19507 20433 D TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; daunorubicin resistance ABC transporter ATPase 19507..20433 Geobacter uraniireducens Rf4 5164067 YP_001228804.1 CDS Gura_0013 NC_009483.1 20508 21263 D PFAM: ABC-2 type transporter; ABC-2 type transporter 20508..21263 Geobacter uraniireducens Rf4 5164068 YP_001228805.1 CDS Gura_0014 NC_009483.1 21393 22466 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 21393..22466 Geobacter uraniireducens Rf4 5164069 YP_001228806.1 CDS hemE NC_009483.1 22609 23628 D catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 22609..23628 Geobacter uraniireducens Rf4 5164073 YP_001228807.1 CDS Gura_0016 NC_009483.1 23781 24599 D hypothetical protein 23781..24599 Geobacter uraniireducens Rf4 5164074 YP_001228808.1 CDS Gura_0017 NC_009483.1 24612 26720 R PFAM: protein of unknown function DUF323; Methyltransferase type 11; Methyltransferase type 12; hypothetical protein complement(24612..26720) Geobacter uraniireducens Rf4 5164075 YP_001228809.1 CDS Gura_0018 NC_009483.1 26740 27750 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase complement(26740..27750) Geobacter uraniireducens Rf4 5164076 YP_001228810.1 CDS Gura_0019 NC_009483.1 27963 28475 D hypothetical protein 27963..28475 Geobacter uraniireducens Rf4 5165249 YP_001228811.1 CDS Gura_0020 NC_009483.1 28392 29837 R PFAM: heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein complement(28392..29837) Geobacter uraniireducens Rf4 5165250 YP_001228812.1 CDS Gura_0021 NC_009483.1 29988 30263 D hypothetical protein 29988..30263 Geobacter uraniireducens Rf4 5165251 YP_001228813.1 CDS Gura_0022 NC_009483.1 30334 31056 R PFAM: Hsp33 protein; Hsp33 protein complement(30334..31056) Geobacter uraniireducens Rf4 5165252 YP_001228814.1 CDS Gura_0023 NC_009483.1 31207 31740 R hypothetical protein complement(31207..31740) Geobacter uraniireducens Rf4 5166084 YP_001228815.1 CDS Gura_0024 NC_009483.1 31893 34271 R PFAM: peptidase U32; peptidase U32 complement(31893..34271) Geobacter uraniireducens Rf4 5166085 YP_001228816.1 CDS Gura_0025 NC_009483.1 34313 34756 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase 34313..34756 Geobacter uraniireducens Rf4 5166086 YP_001228817.1 CDS Gura_0026 NC_009483.1 34799 35287 R hypothetical protein complement(34799..35287) Geobacter uraniireducens Rf4 5166087 YP_001228818.1 CDS Gura_0027 NC_009483.1 35537 36556 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase complement(35537..36556) Geobacter uraniireducens Rf4 5163991 YP_001228819.1 CDS Gura_0028 NC_009483.1 37020 37580 D PFAM: protein of unknown function DUF882; Peptidase M15A; hypothetical protein 37020..37580 Geobacter uraniireducens Rf4 5163992 YP_001228820.1 CDS Gura_0029 NC_009483.1 37784 38554 D PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; OB-fold tRNA/helicase-type nucleic acid binding protein 37784..38554 Geobacter uraniireducens Rf4 5163993 YP_001228821.1 CDS Gura_0030 NC_009483.1 38797 39258 D hypothetical protein 38797..39258 Geobacter uraniireducens Rf4 5166428 YP_001228822.1 CDS Gura_0031 NC_009483.1 39277 40569 D PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein 39277..40569 Geobacter uraniireducens Rf4 5166429 YP_001228823.1 CDS Gura_0032 NC_009483.1 40640 41023 D PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; cobalamin (vitamin B12) biosynthesis CbiX protein 40640..41023 Geobacter uraniireducens Rf4 5166430 YP_001228824.1 CDS Gura_0033 NC_009483.1 41023 41664 D PFAM: Precorrin-8X methylmutase CbiC/CobH; precorrin-8X methylmutase CbiC/CobH 41023..41664 Geobacter uraniireducens Rf4 5166431 YP_001228825.1 CDS Gura_0034 NC_009483.1 41685 42794 D TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; cobalamin biosynthesis protein CbiD 41685..42794 Geobacter uraniireducens Rf4 5164756 YP_001228826.1 CDS Gura_0035 NC_009483.1 42881 44098 D TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase subuit CbiE 42881..44098 Geobacter uraniireducens Rf4 5164757 YP_001228827.1 CDS Gura_0036 NC_009483.1 44215 44949 D TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-2 C(20)-methyltransferase 44215..44949 Geobacter uraniireducens Rf4 5164758 YP_001228828.1 CDS Gura_0037 NC_009483.1 45042 45308 D TIGRFAM: prevent-host-death family protein; prevent-host-death family protein 45042..45308 Geobacter uraniireducens Rf4 5164759 YP_001228829.1 CDS Gura_0038 NC_009483.1 45296 45736 D PFAM: PilT protein domain protein; PilT domain-containing protein 45296..45736 Geobacter uraniireducens Rf4 5166744 YP_001228830.1 CDS Gura_0039 NC_009483.1 45854 46630 D TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-4 C(11)-methyltransferase 45854..46630 Geobacter uraniireducens Rf4 5166745 YP_001228831.1 CDS Gura_0040 NC_009483.1 46804 47865 D PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; cobalamin (vitamin B12) biosynthesis protein CbiG 46804..47865 Geobacter uraniireducens Rf4 5166746 YP_001228832.1 CDS Gura_0041 NC_009483.1 47902 50265 D TIGRFAM: cobyric acid synthase CobQ; precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Cobyrinic acid a,c-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; cobyric acid synthase CobQ 47902..50265 Geobacter uraniireducens Rf4 5166747 YP_001228833.1 CDS Gura_0042 NC_009483.1 50335 51321 D TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; cobalamin biosynthesis protein CobD 50335..51321 Geobacter uraniireducens Rf4 5163635 YP_001228834.1 CDS Gura_0043 NC_009483.1 51562 52635 D TIGRFAM: putative L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase, class I and II; aminotransferase class-III; putative L-threonine-O-3-phosphate decarboxylase 51562..52635 Geobacter uraniireducens Rf4 5163636 YP_001228835.1 CDS Gura_0044 NC_009483.1 52662 53492 R PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(52662..53492) Geobacter uraniireducens Rf4 5163637 YP_001228836.1 CDS Gura_0045 NC_009483.1 54023 54451 D PFAM: ferric-uptake regulator; ferric uptake regulator family protein 54023..54451 Geobacter uraniireducens Rf4 5163638 YP_001228837.1 CDS Gura_0046 NC_009483.1 54448 55398 D PFAM: periplasmic solute binding protein; periplasmic solute binding protein 54448..55398 Geobacter uraniireducens Rf4 5164368 YP_001228838.1 CDS Gura_0047 NC_009483.1 55389 56141 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 55389..56141 Geobacter uraniireducens Rf4 5164369 YP_001228839.1 CDS Gura_0048 NC_009483.1 56242 57060 D PFAM: ABC-3 protein; ABC-3 protein 56242..57060 Geobacter uraniireducens Rf4 5164370 YP_001228840.1 CDS Gura_0049 NC_009483.1 57308 57751 D PFAM: response regulator receiver; response regulator receiver protein 57308..57751 Geobacter uraniireducens Rf4 5164371 YP_001228841.1 CDS Gura_0050 NC_009483.1 57841 59163 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor 57841..59163 Geobacter uraniireducens Rf4 5164897 YP_001228842.1 CDS Gura_0051 NC_009483.1 59228 61183 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 59228..61183 Geobacter uraniireducens Rf4 5164898 YP_001228843.1 CDS Gura_0052 NC_009483.1 61234 62064 D PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein 61234..62064 Geobacter uraniireducens Rf4 5164899 YP_001228844.1 CDS Gura_0053 NC_009483.1 62244 63578 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 62244..63578 Geobacter uraniireducens Rf4 5165019 YP_001228845.1 CDS Gura_0054 NC_009483.1 63613 65016 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor 63613..65016 Geobacter uraniireducens Rf4 5165020 YP_001228846.1 CDS Gura_0055 NC_009483.1 65073 65603 D PFAM: CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase 65073..65603 Geobacter uraniireducens Rf4 5165021 YP_001228847.1 CDS Gura_0056 NC_009483.1 66502 71754 D hypothetical protein 66502..71754 Geobacter uraniireducens Rf4 5164256 YP_001228848.1 CDS Gura_0057 NC_009483.1 71880 72314 D hypothetical protein 71880..72314 Geobacter uraniireducens Rf4 5164257 YP_001228849.1 CDS Gura_0058 NC_009483.1 72314 73312 D PFAM: Integrase, catalytic region; integrase catalytic subunit 72314..73312 Geobacter uraniireducens Rf4 5164258 YP_001228850.1 CDS Gura_0059 NC_009483.1 73425 74018 D hypothetical protein 73425..74018 Geobacter uraniireducens Rf4 5164446 YP_001228851.1 CDS Gura_0060 NC_009483.1 74015 74977 D hypothetical protein 74015..74977 Geobacter uraniireducens Rf4 5164447 YP_001228852.1 CDS Gura_0061 NC_009483.1 75182 75952 D hypothetical protein 75182..75952 Geobacter uraniireducens Rf4 5164448 YP_001228853.1 CDS Gura_0062 NC_009483.1 76021 76662 D hypothetical protein 76021..76662 Geobacter uraniireducens Rf4 5164449 YP_001228854.1 CDS Gura_0063 NC_009483.1 76777 77028 R hypothetical protein complement(76777..77028) Geobacter uraniireducens Rf4 5164752 YP_001228855.1 CDS Gura_0064 NC_009483.1 77043 77855 R PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; IstB ATP binding domain-containing protein complement(77043..77855) Geobacter uraniireducens Rf4 5164753 YP_001228856.1 CDS Gura_0065 NC_009483.1 77845 79293 R PFAM: Integrase, catalytic region; integrase catalytic subunit complement(77845..79293) Geobacter uraniireducens Rf4 5164754 YP_001228857.1 CDS Gura_0068 NC_009483.1 80297 85384 D PFAM: coagulation factor 5/8 type domain protein; Fibronectin, type III domain protein; fibronectin I domain-containing protein 80297..85384 Geobacter uraniireducens Rf4 5163317 YP_001228858.1 CDS Gura_0069 NC_009483.1 85416 86372 D hypothetical protein 85416..86372 Geobacter uraniireducens Rf4 5163318 YP_001228859.1 CDS Gura_0070 NC_009483.1 86378 92233 D PFAM: APHP domain protein; WD40 domain protein beta Propeller; APHP domain-containing protein 86378..92233 Geobacter uraniireducens Rf4 5163319 YP_001228860.1 CDS prpB NC_009483.1 92423 93313 D catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 92423..93313 Geobacter uraniireducens Rf4 5164038 YP_001228861.1 CDS Gura_0072 NC_009483.1 93310 94428 D TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; 2-methylcitrate synthase/citrate synthase II 93310..94428 Geobacter uraniireducens Rf4 5164039 YP_001228862.1 CDS prpD NC_009483.1 94436 95881 D functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; 2-methylcitrate dehydratase 94436..95881 Geobacter uraniireducens Rf4 5164040 YP_001228863.1 CDS Gura_0074 NC_009483.1 96022 96603 R PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; ATP:corrinoid adenosyltransferase BtuR/CobO/CobP complement(96022..96603) Geobacter uraniireducens Rf4 5163021 YP_001228864.1 CDS Gura_0075 NC_009483.1 97075 103743 D TIGRFAM: cytochrome C family protein; cytochrome C family protein 97075..103743 Geobacter uraniireducens Rf4 5163022 YP_001228865.1 CDS Gura_0076 NC_009483.1 103752 108068 D TIGRFAM: cytochrome C family protein; cytochrome C family protein 103752..108068 Geobacter uraniireducens Rf4 5163023 YP_001228866.1 CDS Gura_0077 NC_009483.1 108130 115629 D TIGRFAM: cytochrome C family protein; cytochrome C family protein 108130..115629 Geobacter uraniireducens Rf4 5163024 YP_001228867.1 CDS Gura_0078 NC_009483.1 115981 116289 R hypothetical protein complement(115981..116289) Geobacter uraniireducens Rf4 5164966 YP_001228868.1 CDS Gura_0079 NC_009483.1 116557 117519 D TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 116557..117519 Geobacter uraniireducens Rf4 5164967 YP_001228869.1 CDS Gura_0080 NC_009483.1 117731 118162 D PFAM: Heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 117731..118162 Geobacter uraniireducens Rf4 5164968 YP_001228870.1 CDS Gura_0081 NC_009483.1 118220 118684 D hypothetical protein 118220..118684 Geobacter uraniireducens Rf4 5164969 YP_001228871.1 CDS Gura_0082 NC_009483.1 118684 119844 D PFAM: protein of unknown function DUF214; hypothetical protein 118684..119844 Geobacter uraniireducens Rf4 5164677 YP_001228872.1 CDS Gura_0083 NC_009483.1 119949 120635 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 119949..120635 Geobacter uraniireducens Rf4 5164678 YP_001228873.1 CDS Gura_0084 NC_009483.1 120705 121823 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 120705..121823 Geobacter uraniireducens Rf4 5164679 YP_001228874.1 CDS Gura_0085 NC_009483.1 121820 123178 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 121820..123178 Geobacter uraniireducens Rf4 5164680 YP_001228875.1 CDS Gura_0086 NC_009483.1 123752 124279 R hypothetical protein complement(123752..124279) Geobacter uraniireducens Rf4 5163681 YP_001228876.1 CDS Gura_0087 NC_009483.1 124889 126163 D PFAM: outer membrane efflux protein; outer membrane efflux protein 124889..126163 Geobacter uraniireducens Rf4 5163682 YP_001228877.1 CDS Gura_0088 NC_009483.1 126274 127680 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 126274..127680 Geobacter uraniireducens Rf4 5163683 YP_001228878.1 CDS Gura_0089 NC_009483.1 127924 131070 D TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux protein 127924..131070 Geobacter uraniireducens Rf4 5163684 YP_001228879.1 CDS Gura_0090 NC_009483.1 131158 131634 D hypothetical protein 131158..131634 Geobacter uraniireducens Rf4 5166911 YP_001228880.1 CDS Gura_0091 NC_009483.1 131727 132635 D hypothetical protein 131727..132635 Geobacter uraniireducens Rf4 5166912 YP_001228881.1 CDS Gura_0092 NC_009483.1 132648 133082 D hypothetical protein 132648..133082 Geobacter uraniireducens Rf4 5166913 YP_001228882.1 CDS Gura_0093 NC_009483.1 133160 133672 D hypothetical protein 133160..133672 Geobacter uraniireducens Rf4 5165679 YP_001228883.1 CDS Gura_0094 NC_009483.1 134192 134974 D PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 134192..134974 Geobacter uraniireducens Rf4 5165680 YP_001228884.1 CDS Gura_0095 NC_009483.1 135043 135960 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 135043..135960 Geobacter uraniireducens Rf4 5165681 YP_001228885.1 CDS Gura_0096 NC_009483.1 136135 136734 D PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone) 136135..136734 Geobacter uraniireducens Rf4 5165041 YP_001228886.1 CDS Gura_0097 NC_009483.1 136843 137520 D hypothetical protein 136843..137520 Geobacter uraniireducens Rf4 5165042 YP_001228887.1 CDS Gura_0098 NC_009483.1 137542 138237 R protein-disulfide isomerase-like protein complement(137542..138237) Geobacter uraniireducens Rf4 5165043 YP_001228888.1 CDS Gura_0099 NC_009483.1 138711 139319 D PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor 138711..139319 Geobacter uraniireducens Rf4 5166617 YP_001228889.1 CDS Gura_0100 NC_009483.1 139319 140434 D putative transmembrane anti-sigma factor 139319..140434 Geobacter uraniireducens Rf4 5166618 YP_001228890.1 CDS Gura_0101 NC_009483.1 140569 141348 D hypothetical protein 140569..141348 Geobacter uraniireducens Rf4 5166619 YP_001228891.1 CDS Gura_0102 NC_009483.1 141537 141914 D hypothetical protein 141537..141914 Geobacter uraniireducens Rf4 5164766 YP_001228892.1 CDS Gura_0103 NC_009483.1 141911 142402 D hypothetical protein 141911..142402 Geobacter uraniireducens Rf4 5164767 YP_001228893.1 CDS Gura_0104 NC_009483.1 142485 142940 D PFAM: Ankyrin; ankyrin 142485..142940 Geobacter uraniireducens Rf4 5164768 YP_001228894.1 CDS Gura_0105 NC_009483.1 143224 143916 D PFAM: TPR repeat-containing protein; Sel1 domain protein repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 143224..143916 Geobacter uraniireducens Rf4 5165165 YP_001228895.1 CDS Gura_0106 NC_009483.1 144043 145224 D PFAM: transposase, mutator type; transposase, mutator type 144043..145224 Geobacter uraniireducens Rf4 5165166 YP_001228896.1 CDS Gura_0107 NC_009483.1 145190 146431 R PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein complement(145190..146431) Geobacter uraniireducens Rf4 5165167 YP_001228897.1 CDS Gura_0108 NC_009483.1 146737 147951 D PFAM: transposase, mutator type; transposase, mutator type 146737..147951 Geobacter uraniireducens Rf4 5164806 YP_001228898.1 CDS Gura_0109 NC_009483.1 148033 148311 R hypothetical protein complement(148033..148311) Geobacter uraniireducens Rf4 5164807 YP_001228899.1 CDS Gura_0110 NC_009483.1 148427 149791 R hypothetical protein complement(148427..149791) Geobacter uraniireducens Rf4 5164808 YP_001228900.1 CDS Gura_0111 NC_009483.1 150012 153026 R PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase complement(150012..153026) Geobacter uraniireducens Rf4 5166971 YP_001228901.1 CDS Gura_0112 NC_009483.1 153044 154498 R TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; succinate-semialdehyde dehydrogenase complement(153044..154498) Geobacter uraniireducens Rf4 5166972 YP_001228902.1 CDS Gura_0113 NC_009483.1 154603 155313 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(154603..155313) Geobacter uraniireducens Rf4 5166973 YP_001228903.1 CDS Gura_0114 NC_009483.1 155310 156035 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(155310..156035) Geobacter uraniireducens Rf4 5164483 YP_001228904.1 CDS Gura_0115 NC_009483.1 156038 157015 R PFAM: inner-membrane translocator; inner-membrane translocator complement(156038..157015) Geobacter uraniireducens Rf4 5164484 YP_001228905.1 CDS Gura_0116 NC_009483.1 157018 157902 R PFAM: inner-membrane translocator; inner-membrane translocator complement(157018..157902) Geobacter uraniireducens Rf4 5164485 YP_001228906.1 CDS Gura_0117 NC_009483.1 158018 159262 R PFAM: Extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(158018..159262) Geobacter uraniireducens Rf4 5163756 YP_001228907.1 CDS Gura_0118 NC_009483.1 159658 161433 R TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; sigma-54 dependent trancsriptional regulator complement(159658..161433) Geobacter uraniireducens Rf4 5163757 YP_001228908.1 CDS Gura_0119 NC_009483.1 161855 163171 D TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; 4-aminobutyrate aminotransferase 161855..163171 Geobacter uraniireducens Rf4 5162616 YP_001228909.1 CDS Gura_0120 NC_009483.1 163494 169574 R TIGRFAM: cytochrome C family protein; cytochrome C family protein complement(163494..169574) Geobacter uraniireducens Rf4 5162617 YP_001228910.1 CDS Gura_0121 NC_009483.1 169899 171728 R Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase complement(169899..171728) Geobacter uraniireducens Rf4 5162618 YP_001228911.1 CDS glmU NC_009483.1 171794 173167 R forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(171794..173167) Geobacter uraniireducens Rf4 5166393 YP_001228912.1 CDS Gura_0123 NC_009483.1 173374 173928 D hypothetical protein 173374..173928 Geobacter uraniireducens Rf4 5166394 YP_001228913.1 CDS Gura_0124 NC_009483.1 173965 175842 D PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 173965..175842 Geobacter uraniireducens Rf4 5166395 YP_001228914.1 CDS Gura_0125 NC_009483.1 176170 178026 D hypothetical protein 176170..178026 Geobacter uraniireducens Rf4 5162763 YP_001228915.1 CDS Gura_0126 NC_009483.1 178140 179504 R hypothetical protein complement(178140..179504) Geobacter uraniireducens Rf4 5162764 YP_001228916.1 CDS Gura_0127 NC_009483.1 179620 179790 R hypothetical protein complement(179620..179790) Geobacter uraniireducens Rf4 5162765 YP_001228917.1 CDS Gura_0128 NC_009483.1 180118 182460 R PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; GAF sensor signal transduction histidine kinase complement(180118..182460) Geobacter uraniireducens Rf4 5165918 YP_001228918.1 CDS Gura_0129 NC_009483.1 182520 182876 R TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger, DksA/TraR C4-type; TraR/DksA family transcriptional regulator complement(182520..182876) Geobacter uraniireducens Rf4 5162781 YP_001228919.1 CDS Gura_0130 NC_009483.1 182970 184331 R Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA complement(182970..184331) Geobacter uraniireducens Rf4 5162782 YP_001228920.1 CDS Gura_0131 NC_009483.1 184480 186123 D PFAM: PBS lyase HEAT domain protein repeat-containing protein; HEAT repeat-containing PBS lyase 184480..186123 Geobacter uraniireducens Rf4 5162783 YP_001228921.1 CDS Gura_0132 NC_009483.1 186120 187493 D PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 186120..187493 Geobacter uraniireducens Rf4 5162903 YP_001228922.1 CDS Gura_0133 NC_009483.1 187500 188093 R PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; HEAT repeat-containing PBS lyase complement(187500..188093) Geobacter uraniireducens Rf4 5162904 YP_001228923.1 CDS Gura_0134 NC_009483.1 188155 188478 D hypothetical protein 188155..188478 Geobacter uraniireducens Rf4 5162905 YP_001228924.1 CDS Gura_0135 NC_009483.1 188642 189622 D TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 188642..189622 Geobacter uraniireducens Rf4 5163375 YP_001228925.1 CDS Gura_0136 NC_009483.1 189546 190673 R hypothetical protein complement(189546..190673) Geobacter uraniireducens Rf4 5163376 YP_001228926.1 CDS Gura_0137 NC_009483.1 190762 191088 R hypothetical protein complement(190762..191088) Geobacter uraniireducens Rf4 5163377 YP_001228927.1 CDS Gura_0138 NC_009483.1 191092 191301 R hypothetical protein complement(191092..191301) Geobacter uraniireducens Rf4 5167087 YP_001228928.1 CDS Gura_0139 NC_009483.1 191373 192548 D PFAM: transposase, IS4 family protein; transposase, IS4 family protein 191373..192548 Geobacter uraniireducens Rf4 5167088 YP_001228929.1 CDS Gura_0140 NC_009483.1 192799 196278 D TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; transcription-repair coupling factor 192799..196278 Geobacter uraniireducens Rf4 5167089 YP_001228930.1 CDS Gura_0141 NC_009483.1 196333 197265 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 196333..197265 Geobacter uraniireducens Rf4 5165029 YP_001228931.1 CDS Gura_0142 NC_009483.1 197280 198317 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 197280..198317 Geobacter uraniireducens Rf4 5165030 YP_001228932.1 CDS Gura_0143 NC_009483.1 198394 199287 R PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; chaperone DnaJ domain-containing protein complement(198394..199287) Geobacter uraniireducens Rf4 5165031 YP_001228933.1 CDS Gura_0144 NC_009483.1 199443 200858 D TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase; FAD dependent oxidoreductase; protoporphyrinogen oxidase 199443..200858 Geobacter uraniireducens Rf4 5163186 YP_001228934.1 CDS Gura_0145 NC_009483.1 200916 201758 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding subunit complement(200916..201758) Geobacter uraniireducens Rf4 5163187 YP_001228935.1 CDS Gura_0146 NC_009483.1 201839 202843 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(201839..202843) Geobacter uraniireducens Rf4 5165937 YP_001228936.1 CDS Gura_0147 NC_009483.1 203013 203960 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(203013..203960) Geobacter uraniireducens Rf4 5165938 YP_001228937.1 CDS Gura_0148 NC_009483.1 204078 204563 R PFAM: methyl-viologen-reducing hydrogenase, delta subunit; methyl-viologen-reducing hydrogenase subunit delta complement(204078..204563) Geobacter uraniireducens Rf4 5165939 YP_001228938.1 CDS Gura_0149 NC_009483.1 204697 206694 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(204697..206694) Geobacter uraniireducens Rf4 5165067 YP_001228939.1 CDS Gura_0150 NC_009483.1 206845 207732 R PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; CoB--CoM heterodisulfide reductase complement(206845..207732) Geobacter uraniireducens Rf4 5165068 YP_001228940.1 CDS Gura_0151 NC_009483.1 207868 208446 R heterodisulfide reductase subunit C-like protein complement(207868..208446) Geobacter uraniireducens Rf4 5165069 YP_001228941.1 CDS Gura_0152 NC_009483.1 208788 210923 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF162; protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein complement(208788..210923) Geobacter uraniireducens Rf4 5166566 YP_001228942.1 CDS Gura_0153 NC_009483.1 210920 211474 R PFAM: protein of unknown function DUF162; hypothetical protein complement(210920..211474) Geobacter uraniireducens Rf4 5166567 YP_001228943.1 CDS Gura_0154 NC_009483.1 211922 213871 D TIGRFAM: L-lactate transport; PFAM: L-lactate permease; L-lactate transport 211922..213871 Geobacter uraniireducens Rf4 5166568 YP_001228944.1 CDS Gura_0155 NC_009483.1 214188 215354 D TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; succinyl-CoA synthetase subunit beta 214188..215354 Geobacter uraniireducens Rf4 5163367 YP_001228945.1 CDS Gura_0156 NC_009483.1 215367 216239 D TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit alpha 215367..216239 Geobacter uraniireducens Rf4 5163368 YP_001228946.1 CDS Gura_0157 NC_009483.1 216299 216475 D hypothetical protein 216299..216475 Geobacter uraniireducens Rf4 5163369 YP_001228947.1 CDS Gura_0158 NC_009483.1 216717 217436 D PFAM: regulatory protein GntR, HTH; GntR domain protein; GntR family transcriptional regulator 216717..217436 Geobacter uraniireducens Rf4 5166735 YP_001228948.1 CDS Gura_0159 NC_009483.1 217612 219237 D PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 217612..219237 Geobacter uraniireducens Rf4 5166736 YP_001228949.1 CDS Gura_0160 NC_009483.1 219238 221088 D PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 219238..221088 Geobacter uraniireducens Rf4 5166737 YP_001228950.1 CDS Gura_0161 NC_009483.1 221329 221607 D hypothetical protein 221329..221607 Geobacter uraniireducens Rf4 5163218 YP_001228951.1 CDS Gura_0162 NC_009483.1 221951 225001 D hypothetical protein 221951..225001 Geobacter uraniireducens Rf4 5163219 YP_001228952.1 CDS Gura_0163 NC_009483.1 225065 225661 D hypothetical protein 225065..225661 Geobacter uraniireducens Rf4 5163220 YP_001228953.1 CDS Gura_0164 NC_009483.1 225746 227656 D TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; small GTP-binding protein domain; selenocysteine-specific translation elongation factor 225746..227656 Geobacter uraniireducens Rf4 5165432 YP_001228954.1 CDS Gura_0165 NC_009483.1 227809 229515 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 227809..229515 Geobacter uraniireducens Rf4 5165433 YP_001228955.1 CDS Gura_0166 NC_009483.1 229710 230123 D PFAM: response regulator receiver; response regulator receiver protein 229710..230123 Geobacter uraniireducens Rf4 5165434 YP_001228956.1 CDS Gura_0167 NC_009483.1 230111 232084 R hypothetical protein complement(230111..232084) Geobacter uraniireducens Rf4 5165801 YP_001228957.1 CDS Gura_0168 NC_009483.1 232155 232826 R PFAM: isochorismatase hydrolase; isochorismatase hydrolase complement(232155..232826) Geobacter uraniireducens Rf4 5165802 YP_001228958.1 CDS Gura_0169 NC_009483.1 232962 233360 R PFAM: PilT protein domain protein; PilT domain-containing protein complement(232962..233360) Geobacter uraniireducens Rf4 5165803 YP_001228959.1 CDS Gura_0170 NC_009483.1 233353 233670 R TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; AbrB family transcriptional regulator complement(233353..233670) Geobacter uraniireducens Rf4 5165056 YP_001228960.1 CDS Gura_0171 NC_009483.1 233785 234603 R PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATPase complement(233785..234603) Geobacter uraniireducens Rf4 5165057 YP_001228961.1 CDS Gura_0172 NC_009483.1 234804 234986 R hypothetical protein complement(234804..234986) Geobacter uraniireducens Rf4 5165058 YP_001228962.1 CDS hemH NC_009483.1 235035 235994 R protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase complement(235035..235994) Geobacter uraniireducens Rf4 5166416 YP_001228963.1 CDS Gura_0174 NC_009483.1 236166 236879 D PFAM: cyclase family protein; cyclase family protein 236166..236879 Geobacter uraniireducens Rf4 5166417 YP_001228964.1 CDS Gura_0175 NC_009483.1 236924 237814 R TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase complement(236924..237814) Geobacter uraniireducens Rf4 5166418 YP_001228965.1 CDS Gura_0176 NC_009483.1 237811 238332 R PFAM: NUDIX hydrolase; NUDIX hydrolase complement(237811..238332) Geobacter uraniireducens Rf4 5164359 YP_001228966.1 CDS Gura_0177 NC_009483.1 238494 238712 D PFAM: protein of unknown function DUF1458; hypothetical protein 238494..238712 Geobacter uraniireducens Rf4 5164360 YP_001228967.1 CDS Gura_0178 NC_009483.1 238749 239270 D PFAM: peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 238749..239270 Geobacter uraniireducens Rf4 5164361 YP_001228968.1 CDS Gura_0179 NC_009483.1 239361 239837 R PFAM: Rubrerythrin; rubrerythrin complement(239361..239837) Geobacter uraniireducens Rf4 5163562 YP_001228969.1 CDS Gura_0180 NC_009483.1 240169 241158 D PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 240169..241158 Geobacter uraniireducens Rf4 5163563 YP_001228970.1 CDS Gura_0181 NC_009483.1 241233 241901 D hypothetical protein 241233..241901 Geobacter uraniireducens Rf4 5163335 YP_001228971.1 CDS Gura_0182 NC_009483.1 241936 242418 D PFAM: SEC-C motif domain protein; SecC motif-containing protein 241936..242418 Geobacter uraniireducens Rf4 5163336 YP_001228972.1 CDS Gura_0183 NC_009483.1 242924 244327 D PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 242924..244327 Geobacter uraniireducens Rf4 5163337 YP_001228973.1 CDS Gura_0184 NC_009483.1 244487 245377 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 244487..245377 Geobacter uraniireducens Rf4 5162703 YP_001228974.1 CDS Gura_0185 NC_009483.1 245649 247346 D TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit, N terminal domain protein; ribonucleoside-diphosphate reductase 245649..247346 Geobacter uraniireducens Rf4 5162704 YP_001228975.1 CDS Gura_0186 NC_009483.1 247776 248738 D hypothetical protein 247776..248738 Geobacter uraniireducens Rf4 5162705 YP_001228976.1 CDS Gura_0187 NC_009483.1 248807 249748 D PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; ATPase 248807..249748 Geobacter uraniireducens Rf4 5164729 YP_001228977.1 CDS Gura_0188 NC_009483.1 249745 250983 D PFAM: protein of unknown function DUF58; hypothetical protein 249745..250983 Geobacter uraniireducens Rf4 5164730 YP_001228978.1 CDS Gura_0189 NC_009483.1 250980 253271 D PFAM: transglutaminase domain protein; transglutaminase domain-containing protein 250980..253271 Geobacter uraniireducens Rf4 5164731 YP_001228979.1 CDS Gura_0190 NC_009483.1 253550 254416 D TIGRFAM: MJ0042 family finger-like protein; Zinc finger-domain-containing protein 253550..254416 Geobacter uraniireducens Rf4 5166007 YP_001228980.1 CDS Gura_0191 NC_009483.1 254568 256004 R PFAM: phospholipase D/Transphosphatidylase; phospholipase D/transphosphatidylase complement(254568..256004) Geobacter uraniireducens Rf4 5166008 YP_001228981.1 CDS Gura_0192 NC_009483.1 256100 256552 R hypothetical protein complement(256100..256552) Geobacter uraniireducens Rf4 5166009 YP_001228982.1 CDS Gura_0193 NC_009483.1 257008 258354 D TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; sun protein 257008..258354 Geobacter uraniireducens Rf4 5165217 YP_001228983.1 CDS Gura_0194 NC_009483.1 258384 259049 D PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 258384..259049 Geobacter uraniireducens Rf4 5165218 YP_001228984.1 CDS Gura_0195 NC_009483.1 259281 260210 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; response regulator receiver modulated diguanylate cyclase 259281..260210 Geobacter uraniireducens Rf4 5165219 YP_001228985.1 CDS Gura_0196 NC_009483.1 260193 260879 R PFAM: HhH-GPD family protein; HhH-GPD family protein complement(260193..260879) Geobacter uraniireducens Rf4 5165189 YP_001228986.1 CDS Gura_0197 NC_009483.1 260864 261220 R hypothetical protein complement(260864..261220) Geobacter uraniireducens Rf4 5165190 YP_001228987.1 CDS Gura_0198 NC_009483.1 261236 261769 R carbonic anhydrase complement(261236..261769) Geobacter uraniireducens Rf4 5165191 YP_001228988.1 CDS Gura_0199 NC_009483.1 261833 262747 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(261833..262747) Geobacter uraniireducens Rf4 5163277 YP_001228989.1 CDS tatA NC_009483.1 262973 263239 D TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 262973..263239 Geobacter uraniireducens Rf4 5163278 YP_001228990.1 CDS Gura_0201 NC_009483.1 263294 264121 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein complement(263294..264121) Geobacter uraniireducens Rf4 5163279 YP_001228991.1 CDS Gura_0202 NC_009483.1 264266 264850 R PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein complement(264266..264850) Geobacter uraniireducens Rf4 5163608 YP_001228992.1 CDS Gura_0203 NC_009483.1 264985 266268 R PFAM: WD40 domain protein beta Propeller; WD40 domain-containing protein complement(264985..266268) Geobacter uraniireducens Rf4 5163609 YP_001228993.1 CDS Gura_0204 NC_009483.1 266265 267002 R TIGRFAM: TonB family protein; TonB family protein complement(266265..267002) Geobacter uraniireducens Rf4 5163610 YP_001228994.1 CDS Gura_0205 NC_009483.1 267041 267460 R PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(267041..267460) Geobacter uraniireducens Rf4 5165156 YP_001228995.1 CDS Gura_0206 NC_009483.1 267470 268144 R PFAM: MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(267470..268144) Geobacter uraniireducens Rf4 5165157 YP_001228996.1 CDS Gura_0207 NC_009483.1 268274 269053 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(268274..269053) Geobacter uraniireducens Rf4 5165158 YP_001228997.1 CDS Gura_0208 NC_009483.1 269180 270325 D TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; putative oxygen-independent coproporphyrinogen III oxidase 269180..270325 Geobacter uraniireducens Rf4 5166690 YP_001228998.1 CDS Gura_0209 NC_009483.1 270445 271476 D TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; heat-inducible transcription repressor HrcA 270445..271476 Geobacter uraniireducens Rf4 5166691 YP_001228999.1 CDS Gura_0210 NC_009483.1 271541 272140 D with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 271541..272140 Geobacter uraniireducens Rf4 5166692 YP_001229000.1 CDS dnaK NC_009483.1 272329 274236 D heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 272329..274236 Geobacter uraniireducens Rf4 5162885 YP_001229001.1 CDS Gura_0212 NC_009483.1 274376 275494 D chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 274376..275494 Geobacter uraniireducens Rf4 5162886 YP_001229002.1 CDS Gura_0213 NC_009483.1 275491 276069 D PFAM: phospholipase D/Transphosphatidylase; phospholipase D/transphosphatidylase 275491..276069 Geobacter uraniireducens Rf4 5162887 YP_001229003.1 CDS Gura_0214 NC_009483.1 276246 276995 D NCAIR mutase (PurE)-like protein 276246..276995 Geobacter uraniireducens Rf4 5162790 YP_001229004.1 CDS Gura_0215 NC_009483.1 277074 278246 D PFAM: protein of unknown function DUF111; hypothetical protein 277074..278246 Geobacter uraniireducens Rf4 5162791 YP_001229005.1 CDS Gura_0216 NC_009483.1 278243 278692 D PFAM: phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A 278243..278692 Geobacter uraniireducens Rf4 5164211 YP_001229006.1 CDS Gura_0217 NC_009483.1 278689 279951 D TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; competence/damage-inducible protein CinA 278689..279951 Geobacter uraniireducens Rf4 5164212 YP_001229007.1 CDS Gura_0218 NC_009483.1 279986 282073 D TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 279986..282073 Geobacter uraniireducens Rf4 5164213 YP_001229008.1 CDS recA NC_009483.1 282254 283255 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 282254..283255 Geobacter uraniireducens Rf4 5164387 YP_001229009.1 CDS Gura_0220 NC_009483.1 283260 284411 D TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; twitching motility protein 283260..284411 Geobacter uraniireducens Rf4 5164388 YP_001229010.1 CDS Gura_0221 NC_009483.1 284413 284871 D PFAM: regulatory protein RecX; regulatory protein RecX 284413..284871 Geobacter uraniireducens Rf4 5164389 YP_001229011.1 CDS alaS NC_009483.1 285046 287676 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 285046..287676 Geobacter uraniireducens Rf4 5164193 YP_001229012.1 CDS Gura_0223 NC_009483.1 287688 288032 D PFAM: Cupin 2, conserved barrel domain protein; cupin 287688..288032 Geobacter uraniireducens Rf4 5164194 YP_001229013.1 CDS Gura_0224 NC_009483.1 288058 289197 D PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; response regulator receiver sensor signal transduction histidine kinase 288058..289197 Geobacter uraniireducens Rf4 5164195 YP_001229014.1 CDS Gura_0225 NC_009483.1 289511 290389 D catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 289511..290389 Geobacter uraniireducens Rf4 5165004 YP_001229015.1 CDS Gura_0226 NC_009483.1 290456 291646 D catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 290456..291646 Geobacter uraniireducens Rf4 5165005 YP_001229016.1 CDS Gura_0227 NC_009483.1 291701 292618 D catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 291701..292618 Geobacter uraniireducens Rf4 5165006 YP_001229017.1 CDS Gura_0228 NC_009483.1 292767 293987 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 292767..293987 Geobacter uraniireducens Rf4 5163805 YP_001229018.1 CDS Gura_0229 NC_009483.1 294059 294520 D PFAM: NUDIX hydrolase; NUDIX hydrolase 294059..294520 Geobacter uraniireducens Rf4 5163806 YP_001229019.1 CDS Gura_0230 NC_009483.1 294581 295771 D hypothetical protein 294581..295771 Geobacter uraniireducens Rf4 5163807 YP_001229020.1 CDS Gura_0231 NC_009483.1 295857 297233 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 295857..297233 Geobacter uraniireducens Rf4 5166052 YP_001229021.1 CDS Gura_0232 NC_009483.1 297334 298107 D PFAM: Fibronectin, type III domain protein; fibronectin I domain-containing protein 297334..298107 Geobacter uraniireducens Rf4 5166053 YP_001229022.1 CDS Gura_0233 NC_009483.1 298305 299558 D TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase 298305..299558 Geobacter uraniireducens Rf4 5166054 YP_001229023.1 CDS Gura_0234 NC_009483.1 299631 300503 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 299631..300503 Geobacter uraniireducens Rf4 5164772 YP_001229024.1 CDS Gura_0235 NC_009483.1 300687 301490 D catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 300687..301490 Geobacter uraniireducens Rf4 5164773 YP_001229025.1 CDS Gura_0236 NC_009483.1 301511 301822 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 301511..301822 Geobacter uraniireducens Rf4 5164774 YP_001229026.1 CDS Gura_0237 NC_009483.1 301815 302210 D PFAM: HEPN domain protein; HEPN domain-containing protein 301815..302210 Geobacter uraniireducens Rf4 5163688 YP_001229027.1 CDS Gura_0238 NC_009483.1 302239 303471 D catalyzes the interconversion of tetrahydrodipicolinate and L,L-diaminopimelate in lysine biosynthesis; L,L-diaminopimelate aminotransferase 302239..303471 Geobacter uraniireducens Rf4 5163689 YP_001229028.1 CDS Gura_0239 NC_009483.1 303582 303842 D hypothetical protein 303582..303842 Geobacter uraniireducens Rf4 5163690 YP_001229029.1 CDS Gura_0240 NC_009483.1 303852 304136 D hypothetical protein 303852..304136 Geobacter uraniireducens Rf4 5166112 YP_001229030.1 CDS Gura_0241 NC_009483.1 304309 304608 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 304309..304608 Geobacter uraniireducens Rf4 5166113 YP_001229031.1 CDS Gura_0242 NC_009483.1 304805 305407 D hypothetical protein 304805..305407 Geobacter uraniireducens Rf4 5166114 YP_001229032.1 CDS Gura_0243 NC_009483.1 305400 306557 D PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal-dependent phosphohydrolase 305400..306557 Geobacter uraniireducens Rf4 5164833 YP_001229033.1 CDS Gura_0244 NC_009483.1 306760 307974 D PFAM: transposase, mutator type; transposase, mutator type 306760..307974 Geobacter uraniireducens Rf4 5164834 YP_001229034.1 CDS Gura_0245 NC_009483.1 308233 309408 R PFAM: transposase, IS4 family protein; transposase, IS4 family protein complement(308233..309408) Geobacter uraniireducens Rf4 5164835 YP_001229035.1 CDS Gura_0246 NC_009483.1 309609 310118 D PFAM: protein of unknown function UPF0153; hypothetical protein 309609..310118 Geobacter uraniireducens Rf4 5163564 YP_001229036.1 CDS Gura_0247 NC_009483.1 310246 310443 D hypothetical protein 310246..310443 Geobacter uraniireducens Rf4 5163565 YP_001229037.1 CDS Gura_0248 NC_009483.1 310526 310786 D hypothetical protein 310526..310786 Geobacter uraniireducens Rf4 5163566 YP_001229038.1 CDS Gura_0249 NC_009483.1 310892 312091 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(310892..312091) Geobacter uraniireducens Rf4 5166221 YP_001229039.1 CDS Gura_0250 NC_009483.1 312256 312774 D PFAM: protein of unknown function DUF45; hypothetical protein 312256..312774 Geobacter uraniireducens Rf4 5166222 YP_001229040.1 CDS Gura_0251 NC_009483.1 312820 313587 D PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 312820..313587 Geobacter uraniireducens Rf4 5164229 YP_001229041.1 CDS Gura_0252 NC_009483.1 314214 315617 D PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 314214..315617 Geobacter uraniireducens Rf4 5164230 YP_001229042.1 CDS Gura_0253 NC_009483.1 315934 316149 D hypothetical protein 315934..316149 Geobacter uraniireducens Rf4 5164231 YP_001229043.1 CDS Gura_0254 NC_009483.1 316283 316564 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(316283..316564) Geobacter uraniireducens Rf4 5164611 YP_001229044.1 CDS Gura_0255 NC_009483.1 316697 317167 R hypothetical protein complement(316697..317167) Geobacter uraniireducens Rf4 5164612 YP_001229045.1 CDS Gura_0256 NC_009483.1 317415 318689 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(317415..318689) Geobacter uraniireducens Rf4 5164613 YP_001229046.1 CDS Gura_0257 NC_009483.1 318864 319745 D PFAM: pseudouridine synthase; pseudouridine synthase 318864..319745 Geobacter uraniireducens Rf4 5166399 YP_001229047.1 CDS Gura_0258 NC_009483.1 319942 320367 D hypothetical protein 319942..320367 Geobacter uraniireducens Rf4 5166400 YP_001229048.1 CDS Gura_0259 NC_009483.1 320455 320763 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 320455..320763 Geobacter uraniireducens Rf4 5166401 YP_001229049.1 CDS Gura_0260 NC_009483.1 321169 321657 R PFAM: thioesterase superfamily protein; thioesterase superfamily protein complement(321169..321657) Geobacter uraniireducens Rf4 5162697 YP_001229050.1 CDS Gura_0261 NC_009483.1 322274 322978 R PFAM: Endonuclease V; deoxyribonuclease V complement(322274..322978) Geobacter uraniireducens Rf4 5162698 YP_001229051.1 CDS Gura_0262 NC_009483.1 323548 323763 D PFAM: protein of unknown function DUF1653; hypothetical protein 323548..323763 Geobacter uraniireducens Rf4 5162699 YP_001229052.1 CDS Gura_0263 NC_009483.1 323849 324469 R PFAM: protein of unknown function UPF0126; hypothetical protein complement(323849..324469) Geobacter uraniireducens Rf4 5166049 YP_001229053.1 CDS Gura_0264 NC_009483.1 324641 325297 R hypothetical protein complement(324641..325297) Geobacter uraniireducens Rf4 5166050 YP_001229054.1 CDS Gura_0265 NC_009483.1 325479 326765 R TIGRFAM: PAS sensor protein; PFAM: CHASE4 domain protein; PAS fold-4 domain protein; PAS fold domain protein; putative PAS/PAC sensor protein complement(325479..326765) Geobacter uraniireducens Rf4 5166051 YP_001229055.1 CDS Gura_0266 NC_009483.1 326885 327805 R PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein complement(326885..327805) Geobacter uraniireducens Rf4 5166838 YP_001229056.1 CDS Gura_0267 NC_009483.1 327983 328444 D PFAM: PEBP family protein; PEBP family protein 327983..328444 Geobacter uraniireducens Rf4 5166839 YP_001229057.1 CDS Gura_0268 NC_009483.1 328619 329605 D catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 328619..329605 Geobacter uraniireducens Rf4 5166840 YP_001229058.1 CDS Gura_0269 NC_009483.1 329821 332478 D TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 329821..332478 Geobacter uraniireducens Rf4 5163200 YP_001229059.1 CDS Gura_0270 NC_009483.1 332823 334076 D hypothetical protein 332823..334076 Geobacter uraniireducens Rf4 5163201 YP_001229060.1 CDS Gura_0271 NC_009483.1 334206 335462 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 334206..335462 Geobacter uraniireducens Rf4 5163202 YP_001229061.1 CDS Gura_0272 NC_009483.1 335543 335767 R hypothetical protein complement(335543..335767) Geobacter uraniireducens Rf4 5162939 YP_001229062.1 CDS Gura_0273 NC_009483.1 335771 336772 R PFAM: dihydrouridine synthase, DuS; dihydrouridine synthase, DuS complement(335771..336772) Geobacter uraniireducens Rf4 5162940 YP_001229063.1 CDS Gura_0274 NC_009483.1 336936 337442 R PFAM: peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase complement(336936..337442) Geobacter uraniireducens Rf4 5162941 YP_001229064.1 CDS Gura_0275 NC_009483.1 337714 338139 R PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(337714..338139) Geobacter uraniireducens Rf4 5165700 YP_001229065.1 CDS Gura_0276 NC_009483.1 338347 339222 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(338347..339222) Geobacter uraniireducens Rf4 5165701 YP_001229066.1 CDS Gura_0277 NC_009483.1 339489 340148 D PFAM: protein of unknown function DUF480; hypothetical protein 339489..340148 Geobacter uraniireducens Rf4 5165702 YP_001229067.1 CDS Gura_0278 NC_009483.1 340360 341580 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase 340360..341580 Geobacter uraniireducens Rf4 5164777 YP_001229068.1 CDS Gura_0279 NC_009483.1 341624 342214 D PFAM: NUDIX hydrolase; NUDIX hydrolase 341624..342214 Geobacter uraniireducens Rf4 5164778 YP_001229069.1 CDS Gura_0280 NC_009483.1 342343 342684 D hypothetical protein 342343..342684 Geobacter uraniireducens Rf4 5164779 YP_001229070.1 CDS Gura_0281 NC_009483.1 342665 343519 D PFAM: metal-dependent phosphohydrolase, HD sub domain; HDOD; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 342665..343519 Geobacter uraniireducens Rf4 5163307 YP_001229071.1 CDS Gura_0282 NC_009483.1 343509 344429 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver modulated diguanylate cyclase 343509..344429 Geobacter uraniireducens Rf4 5163308 YP_001229072.1 CDS Gura_0283 NC_009483.1 344512 344814 D hypothetical protein 344512..344814 Geobacter uraniireducens Rf4 5163309 YP_001229073.1 CDS Gura_0284 NC_009483.1 344828 345559 D hypothetical protein 344828..345559 Geobacter uraniireducens Rf4 5165059 YP_001229074.1 CDS Gura_0285 NC_009483.1 345574 346122 R TIGRFAM: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase; 2'-5' RNA ligase complement(345574..346122) Geobacter uraniireducens Rf4 5165060 YP_001229075.1 CDS Gura_0286 NC_009483.1 346133 347179 R poly-gamma-glutamate biosynthesis protein complement(346133..347179) Geobacter uraniireducens Rf4 5166480 YP_001229076.1 CDS Gura_0287 NC_009483.1 347287 348555 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 347287..348555 Geobacter uraniireducens Rf4 5166481 YP_001229077.1 CDS Gura_0288 NC_009483.1 348877 349350 D hypothetical protein 348877..349350 Geobacter uraniireducens Rf4 5164540 YP_001229078.1 CDS tatA NC_009483.1 349797 349988 R TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A complement(349797..349988) Geobacter uraniireducens Rf4 5163384 YP_001229079.1 CDS Gura_0290 NC_009483.1 350304 350759 D PFAM: response regulator receiver; response regulator receiver protein 350304..350759 Geobacter uraniireducens Rf4 5164044 YP_001229080.1 CDS Gura_0291 NC_009483.1 350843 352837 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 350843..352837 Geobacter uraniireducens Rf4 5164045 YP_001229081.1 CDS Gura_0292 NC_009483.1 352859 354223 R TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase complement(352859..354223) Geobacter uraniireducens Rf4 5165757 YP_001229082.1 CDS Gura_0293 NC_009483.1 354339 354698 D hypothetical protein 354339..354698 Geobacter uraniireducens Rf4 5165758 YP_001229083.1 CDS Gura_0294 NC_009483.1 354770 355495 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 354770..355495 Geobacter uraniireducens Rf4 5165759 YP_001229084.1 CDS Gura_0295 NC_009483.1 355627 356226 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase 355627..356226 Geobacter uraniireducens Rf4 5164591 YP_001229085.1 CDS Gura_0296 NC_009483.1 356302 358533 D PFAM: DNA polymerase B, exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; DNA polymerase B region 356302..358533 Geobacter uraniireducens Rf4 5164592 YP_001229086.1 CDS Gura_0297 NC_009483.1 358623 359033 D hypothetical protein 358623..359033 Geobacter uraniireducens Rf4 5164593 YP_001229087.1 CDS Gura_0298 NC_009483.1 359035 359415 D hypothetical protein 359035..359415 Geobacter uraniireducens Rf4 5166325 YP_001229088.1 CDS Gura_0299 NC_009483.1 359528 359767 R hypothetical protein complement(359528..359767) Geobacter uraniireducens Rf4 5166326 YP_001229089.1 CDS Gura_0300 NC_009483.1 360110 362638 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 360110..362638 Geobacter uraniireducens Rf4 5166327 YP_001229090.1 CDS Gura_0301 NC_009483.1 362694 364205 D TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; ribonuclease 362694..364205 Geobacter uraniireducens Rf4 5165970 YP_001229091.1 CDS purT NC_009483.1 364362 365540 D non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 364362..365540 Geobacter uraniireducens Rf4 5165971 YP_001229092.1 CDS Gura_0303 NC_009483.1 365565 365867 D PFAM: Rieske [2Fe-2S] domain protein; Rieske (2Fe-2S) domain-containing protein 365565..365867 Geobacter uraniireducens Rf4 5165972 YP_001229093.1 CDS rplU NC_009483.1 365958 366266 D PFAM: ribosomal protein L21; 50S ribosomal protein L21 365958..366266 Geobacter uraniireducens Rf4 5164315 YP_001229094.1 CDS rpmA NC_009483.1 366353 366610 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 366353..366610 Geobacter uraniireducens Rf4 5164316 YP_001229095.1 CDS obgE NC_009483.1 366690 367706 D essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 366690..367706 Geobacter uraniireducens Rf4 5164317 YP_001229096.1 CDS Gura_0307 NC_009483.1 367816 371634 R PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Ig family protein; peptidase S8/S53 subtilisin kexin sedolisin complement(367816..371634) Geobacter uraniireducens Rf4 5164989 YP_001229097.1 CDS Gura_0308 NC_009483.1 371853 372284 R PFAM: PilT protein domain protein; SMART: Nucleotide binding protein, PINc; PilT domain-containing protein complement(371853..372284) Geobacter uraniireducens Rf4 5164990 YP_001229098.1 CDS Gura_0309 NC_009483.1 372260 372499 R hypothetical protein complement(372260..372499) Geobacter uraniireducens Rf4 5164991 YP_001229099.1 CDS Gura_0310 NC_009483.1 372624 373025 R hypothetical protein complement(372624..373025) Geobacter uraniireducens Rf4 5164145 YP_001229100.1 CDS Gura_0311 NC_009483.1 373154 373408 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein 373154..373408 Geobacter uraniireducens Rf4 5164146 YP_001229101.1 CDS Gura_0312 NC_009483.1 373405 373659 D TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin, Txe/YoeB; addiction module antitoxin 373405..373659 Geobacter uraniireducens Rf4 5164147 YP_001229102.1 CDS Gura_0313 NC_009483.1 373808 375217 R TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N complement(373808..375217) Geobacter uraniireducens Rf4 5164023 YP_001229103.1 CDS Gura_0314 NC_009483.1 375468 376949 R TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M complement(375468..376949) Geobacter uraniireducens Rf4 5164024 YP_001229104.1 CDS Gura_0315 NC_009483.1 377033 377626 R hypothetical protein complement(377033..377626) Geobacter uraniireducens Rf4 5164025 YP_001229105.1 CDS Gura_0316 NC_009483.1 377742 378122 R hypothetical protein complement(377742..378122) Geobacter uraniireducens Rf4 5163247 YP_001229106.1 CDS Gura_0317 NC_009483.1 378414 378947 D hypothetical protein 378414..378947 Geobacter uraniireducens Rf4 5163248 YP_001229107.1 CDS Gura_0318 NC_009483.1 378944 379969 D PFAM: Integrase, catalytic region; integrase catalytic subunit 378944..379969 Geobacter uraniireducens Rf4 5163249 YP_001229108.1 CDS Gura_0319 NC_009483.1 380169 381410 D PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 380169..381410 Geobacter uraniireducens Rf4 5166962 YP_001229109.1 CDS Gura_0320 NC_009483.1 382413 384413 R TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L complement(382413..384413) Geobacter uraniireducens Rf4 5166963 YP_001229110.1 CDS Gura_0321 NC_009483.1 384563 384871 R PFAM: NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase subunit 4L complement(384563..384871) Geobacter uraniireducens Rf4 5166964 YP_001229111.1 CDS Gura_0322 NC_009483.1 385212 385697 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 complement(385212..385697) Geobacter uraniireducens Rf4 5162712 YP_001229112.1 CDS Gura_0323 NC_009483.1 385785 386315 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I complement(385785..386315) Geobacter uraniireducens Rf4 5162713 YP_001229113.1 CDS Gura_0324 NC_009483.1 386355 386783 R ankyrin repeat-containing protein complement(386355..386783) Geobacter uraniireducens Rf4 5162714 YP_001229114.1 CDS Gura_0325 NC_009483.1 386837 387826 R PFAM: respiratory-chain NADH dehydrogenase, subunit 1; NADH dehydrogenase (quinone) complement(386837..387826) Geobacter uraniireducens Rf4 5165847 YP_001229115.1 CDS Gura_0326 NC_009483.1 387823 389718 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G complement(387823..389718) Geobacter uraniireducens Rf4 5165848 YP_001229116.1 CDS Gura_0327 NC_009483.1 389737 390624 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase complement(389737..390624) Geobacter uraniireducens Rf4 5164924 YP_001229117.1 CDS Gura_0328 NC_009483.1 390626 391159 R PFAM: 4-vinyl reductase, 4VR; 4-vinyl reductase, 4VR complement(390626..391159) Geobacter uraniireducens Rf4 5164925 YP_001229118.1 CDS Gura_0329 NC_009483.1 391190 392491 R PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; NADH dehydrogenase (quinone) complement(391190..392491) Geobacter uraniireducens Rf4 5164926 YP_001229119.1 CDS Gura_0330 NC_009483.1 392501 392839 R PFAM: protein of unknown function DUF488; hypothetical protein complement(392501..392839) Geobacter uraniireducens Rf4 5164696 YP_001229120.1 CDS Gura_0331 NC_009483.1 392896 393258 R PFAM: cytochrome c, class I; cytochrome c, class I complement(392896..393258) Geobacter uraniireducens Rf4 5164697 YP_001229121.1 CDS Gura_0332 NC_009483.1 393318 393791 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E complement(393318..393791) Geobacter uraniireducens Rf4 5164698 YP_001229122.1 CDS Gura_0333 NC_009483.1 393908 396289 R NuoBCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; trifunctional NADH dehydrogenase I subunit B/C/D complement(393908..396289) Geobacter uraniireducens Rf4 5164573 YP_001229123.1 CDS Gura_0334 NC_009483.1 396334 396771 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 complement(396334..396771) Geobacter uraniireducens Rf4 5164574 YP_001229124.1 CDS Gura_0335 NC_009483.1 396877 397329 R PFAM: Thioredoxin domain; Contains selenocysteine; thioredoxin domain-containing protein complement(396877..397329) Geobacter uraniireducens Rf4 5164575 YP_001229125.1 CDS Gura_0336 NC_009483.1 397429 398874 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 complement(397429..398874) Geobacter uraniireducens Rf4 5165878 YP_001229126.1 CDS Gura_0337 NC_009483.1 398871 400199 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 complement(398871..400199) Geobacter uraniireducens Rf4 5165879 YP_001229127.1 CDS Gura_0338 NC_009483.1 400199 400576 R TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; glycine cleavage system H protein complement(400199..400576) Geobacter uraniireducens Rf4 5165880 YP_001229128.1 CDS Gura_0339 NC_009483.1 400640 401731 R TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein, C-terminal barrel; glycine cleavage system T protein complement(400640..401731) Geobacter uraniireducens Rf4 5163623 YP_001229129.1 CDS Gura_0340 NC_009483.1 402047 402637 R PFAM: CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase complement(402047..402637) Geobacter uraniireducens Rf4 5163624 YP_001229130.1 CDS Gura_0341 NC_009483.1 403051 403614 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(403051..403614) Geobacter uraniireducens Rf4 5164750 YP_001229131.1 CDS Gura_0342 NC_009483.1 403766 403963 D PFAM: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 403766..403963 Geobacter uraniireducens Rf4 5164751 YP_001229132.1 CDS Gura_0343 NC_009483.1 403972 404337 R involved in start site selection during the initiation of translation; translation initiation factor Sui1 complement(403972..404337) Geobacter uraniireducens Rf4 5166215 YP_001229133.1 CDS Gura_0344 NC_009483.1 404514 406706 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 404514..406706 Geobacter uraniireducens Rf4 5166216 YP_001229134.1 CDS Gura_0345 NC_009483.1 406803 407888 R member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z complement(406803..407888) Geobacter uraniireducens Rf4 5166217 YP_001229135.1 CDS Gura_0346 NC_009483.1 408183 408515 D PFAM: Cupin 2, conserved barrel domain protein; cupin 408183..408515 Geobacter uraniireducens Rf4 5164786 YP_001229136.1 CDS Gura_0347 NC_009483.1 408587 409600 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(408587..409600) Geobacter uraniireducens Rf4 5164787 YP_001229137.1 CDS Gura_0348 NC_009483.1 409735 410253 R hypothetical protein complement(409735..410253) Geobacter uraniireducens Rf4 5164788 YP_001229138.1 CDS Gura_0349 NC_009483.1 410477 412564 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(410477..412564) Geobacter uraniireducens Rf4 5163526 YP_001229139.1 CDS Gura_0350 NC_009483.1 412674 413531 R TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein complement(412674..413531) Geobacter uraniireducens Rf4 5163527 YP_001229140.1 CDS Gura_0351 NC_009483.1 413959 414960 D PFAM: protein of unknown function DUF362; hypothetical protein 413959..414960 Geobacter uraniireducens Rf4 5163528 YP_001229141.1 CDS Gura_0352 NC_009483.1 415197 415511 R PFAM: plasmid stabilization system; plasmid stabilization system protein complement(415197..415511) Geobacter uraniireducens Rf4 5164089 YP_001229142.1 CDS Gura_0353 NC_009483.1 415508 415726 R TIGRFAM: putative addiction module component, TIGR02574 family; addiction module proein complement(415508..415726) Geobacter uraniireducens Rf4 5164090 YP_001229143.1 CDS Gura_0354 NC_009483.1 415908 416225 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(415908..416225) Geobacter uraniireducens Rf4 5164091 YP_001229144.1 CDS Gura_0355 NC_009483.1 416558 416800 D hypothetical protein 416558..416800 Geobacter uraniireducens Rf4 5166733 YP_001229145.1 CDS Gura_0356 NC_009483.1 417350 417658 R hypothetical protein complement(417350..417658) Geobacter uraniireducens Rf4 5166734 YP_001229146.1 CDS Gura_0357 NC_009483.1 417664 418053 R hypothetical protein complement(417664..418053) Geobacter uraniireducens Rf4 5164238 YP_001229147.1 CDS Gura_0358 NC_009483.1 418085 419617 R TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; uroporphyrin-III C-methyltransferase complement(418085..419617) Geobacter uraniireducens Rf4 5164239 YP_001229148.1 CDS hemC NC_009483.1 419732 420688 R transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(419732..420688) Geobacter uraniireducens Rf4 5164240 YP_001229149.1 CDS hemA NC_009483.1 420733 422037 R catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase complement(420733..422037) Geobacter uraniireducens Rf4 5164597 YP_001229150.1 CDS Gura_0361 NC_009483.1 422062 422877 R PFAM: cytochrome c assembly protein; cytochrome c assembly protein complement(422062..422877) Geobacter uraniireducens Rf4 5164598 YP_001229151.1 CDS Gura_0362 NC_009483.1 422874 423623 R TIGRFAM: siroheme synthase; siroheme synthase complement(422874..423623) Geobacter uraniireducens Rf4 5164599 YP_001229152.1 CDS Gura_0363 NC_009483.1 423806 424135 D TIGRFAM: thioredoxin; PFAM: Redoxin domain protein; Thioredoxin domain; thioredoxin 423806..424135 Geobacter uraniireducens Rf4 5165949 YP_001229153.1 CDS Gura_0364 NC_009483.1 424150 424662 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 424150..424662 Geobacter uraniireducens Rf4 5165950 YP_001229154.1 CDS uvrC NC_009483.1 424699 426609 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(424699..426609) Geobacter uraniireducens Rf4 5165951 YP_001229155.1 CDS Gura_0366 NC_009483.1 426784 429876 D chromosome segregation ATPase-like protein 426784..429876 Geobacter uraniireducens Rf4 5163985 YP_001229156.1 CDS Gura_0367 NC_009483.1 429878 430480 D PFAM: Peptidoglycan-binding LysM; peptidoglycan-binding LysM 429878..430480 Geobacter uraniireducens Rf4 5163986 YP_001229157.1 CDS Gura_0368 NC_009483.1 430537 431595 R hypothetical protein complement(430537..431595) Geobacter uraniireducens Rf4 5163987 YP_001229158.1 CDS Gura_0369 NC_009483.1 431645 432841 R hypothetical protein complement(431645..432841) Geobacter uraniireducens Rf4 5163761 YP_001229159.1 CDS Gura_0370 NC_009483.1 433315 434676 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase 433315..434676 Geobacter uraniireducens Rf4 5163762 YP_001229160.1 CDS Gura_0371 NC_009483.1 434825 436012 D PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; beta-lactamase domain-containing protein 434825..436012 Geobacter uraniireducens Rf4 5163763 YP_001229161.1 CDS Gura_0372 NC_009483.1 436158 436583 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 436158..436583 Geobacter uraniireducens Rf4 5166343 YP_001229162.1 CDS Gura_0373 NC_009483.1 437335 438258 D alpha-tubulin suppressor domain-containing protein 437335..438258 Geobacter uraniireducens Rf4 5166344 YP_001229163.1 CDS Gura_0374 NC_009483.1 438582 440846 D TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; primosomal protein N' 438582..440846 Geobacter uraniireducens Rf4 5166345 YP_001229164.1 CDS Gura_0375 NC_009483.1 440919 442943 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(440919..442943) Geobacter uraniireducens Rf4 5165604 YP_001229165.1 CDS Gura_0376 NC_009483.1 443131 444432 R PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(443131..444432) Geobacter uraniireducens Rf4 5165605 YP_001229166.1 CDS Gura_0377 NC_009483.1 444626 445459 D exonuclease-like protein 444626..445459 Geobacter uraniireducens Rf4 5165606 YP_001229167.1 CDS Gura_0378 NC_009483.1 445541 446809 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase 445541..446809 Geobacter uraniireducens Rf4 5165418 YP_001229168.1 CDS Gura_0379 NC_009483.1 446856 447371 R hypothetical protein complement(446856..447371) Geobacter uraniireducens Rf4 5165419 YP_001229169.1 CDS Gura_0380 NC_009483.1 447525 448286 D hypothetical protein 447525..448286 Geobacter uraniireducens Rf4 5165420 YP_001229170.1 CDS Gura_0381 NC_009483.1 448641 449954 D PFAM: sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 448641..449954 Geobacter uraniireducens Rf4 5162727 YP_001229171.1 CDS Gura_0382 NC_009483.1 450488 451168 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Contains selenocysteine; alkyl hydroperoxide reductase complement(450488..451168) Geobacter uraniireducens Rf4 5162728 YP_001229172.1 CDS Gura_0383 NC_009483.1 451529 456709 R PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Fibronectin, type III domain protein; Cna B domain protein; APHP domain protein; SMART: Immunoglobulin subtype; peptidase S8/S53 subtilisin kexin sedolisin complement(451529..456709) Geobacter uraniireducens Rf4 5162729 YP_001229173.1 CDS Gura_0384 NC_009483.1 457429 458037 R hypothetical protein complement(457429..458037) Geobacter uraniireducens Rf4 5165500 YP_001229174.1 CDS Gura_0385 NC_009483.1 458438 458860 R hypothetical protein complement(458438..458860) Geobacter uraniireducens Rf4 5165501 YP_001229175.1 CDS Gura_0386 NC_009483.1 459212 460033 D SMART: PAS domain containing protein; putative PAS/PAC sensor protein 459212..460033 Geobacter uraniireducens Rf4 5165502 YP_001229176.1 CDS Gura_0387 NC_009483.1 460264 461334 D PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase 460264..461334 Geobacter uraniireducens Rf4 5164671 YP_001229177.1 CDS Gura_0388 NC_009483.1 461404 461817 R hypothetical protein complement(461404..461817) Geobacter uraniireducens Rf4 5164672 YP_001229178.1 CDS Gura_0389 NC_009483.1 462248 463483 R hypothetical protein complement(462248..463483) Geobacter uraniireducens Rf4 5164673 YP_001229179.1 CDS Gura_0390 NC_009483.1 463724 464395 R hypothetical protein complement(463724..464395) Geobacter uraniireducens Rf4 5162801 YP_001229180.1 CDS Gura_0391 NC_009483.1 464388 464975 R hypothetical protein complement(464388..464975) Geobacter uraniireducens Rf4 5162802 YP_001229181.1 CDS Gura_0392 NC_009483.1 465148 465660 R hypothetical protein complement(465148..465660) Geobacter uraniireducens Rf4 5162803 YP_001229182.1 CDS Gura_0393 NC_009483.1 465850 470373 D PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase 465850..470373 Geobacter uraniireducens Rf4 5165413 YP_001229183.1 CDS Gura_0394 NC_009483.1 470633 471892 D TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; acetate kinase 470633..471892 Geobacter uraniireducens Rf4 5165414 YP_001229184.1 CDS Gura_0395 NC_009483.1 471937 472407 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase 471937..472407 Geobacter uraniireducens Rf4 5164157 YP_001229185.1 CDS Gura_0396 NC_009483.1 472424 473251 D PFAM: biotin/lipoate A/B protein ligase; biotin/lipoate A/B protein ligase 472424..473251 Geobacter uraniireducens Rf4 5164158 YP_001229186.1 CDS Gura_0397 NC_009483.1 473424 473780 R hypothetical protein complement(473424..473780) Geobacter uraniireducens Rf4 5164159 YP_001229187.1 CDS Gura_0398 NC_009483.1 473857 475875 R TIGRFAM: cytochrome C family protein; cytochrome C family protein complement(473857..475875) Geobacter uraniireducens Rf4 5166370 YP_001229188.1 CDS Gura_0399 NC_009483.1 476403 477254 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 476403..477254 Geobacter uraniireducens Rf4 5166371 YP_001229189.1 CDS Gura_0400 NC_009483.1 477364 477960 D PFAM: peptidase M23B; peptidase M23B 477364..477960 Geobacter uraniireducens Rf4 5166372 YP_001229190.1 CDS Gura_0401 NC_009483.1 477984 478406 R PFAM: protein of unknown function DUF309; hypothetical protein complement(477984..478406) Geobacter uraniireducens Rf4 5163672 YP_001229191.1 CDS Gura_0402 NC_009483.1 478421 478798 R hypothetical protein complement(478421..478798) Geobacter uraniireducens Rf4 5163673 YP_001229192.1 CDS Gura_0403 NC_009483.1 479200 479862 D hypothetical protein 479200..479862 Geobacter uraniireducens Rf4 5163674 YP_001229193.1 CDS Gura_0404 NC_009483.1 479859 480638 R PFAM: UbiA prenyltransferase; UbiA prenyltransferase complement(479859..480638) Geobacter uraniireducens Rf4 5163490 YP_001229194.1 CDS Gura_0405 NC_009483.1 480792 481652 R PFAM: cytochrome oxidase assembly; cytochrome oxidase assembly complement(480792..481652) Geobacter uraniireducens Rf4 5163491 YP_001229195.1 CDS Gura_0406 NC_009483.1 481782 482045 R TIGRFAM: caa(3)-type oxidase, subunit IV; caa(3)-type oxidase subunit IV complement(481782..482045) Geobacter uraniireducens Rf4 5163492 YP_001229196.1 CDS Gura_0407 NC_009483.1 482160 482750 R PFAM: cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III complement(482160..482750) Geobacter uraniireducens Rf4 5163262 YP_001229197.1 CDS Gura_0408 NC_009483.1 482841 484469 R PFAM: cytochrome c oxidase, subunit I; cytochrome-c oxidase complement(482841..484469) Geobacter uraniireducens Rf4 5163263 YP_001229198.1 CDS Gura_0409 NC_009483.1 484657 484947 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 484657..484947 Geobacter uraniireducens Rf4 5163264 YP_001229199.1 CDS Gura_0410 NC_009483.1 484940 485188 D hypothetical protein 484940..485188 Geobacter uraniireducens Rf4 5164720 YP_001229200.1 CDS Gura_0411 NC_009483.1 485354 485692 D TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein-like; alkylphosphonate utilization operon protein PhnA 485354..485692 Geobacter uraniireducens Rf4 5164721 YP_001229201.1 CDS Gura_0412 NC_009483.1 485747 486049 R TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; XRE family plasmid maintenance system antidote protein complement(485747..486049) Geobacter uraniireducens Rf4 5164722 YP_001229202.1 CDS Gura_0413 NC_009483.1 486061 486342 R PFAM: plasmid maintenance system killer; plasmid maintenance system killer protein complement(486061..486342) Geobacter uraniireducens Rf4 5166823 YP_001229203.1 CDS Gura_0414 NC_009483.1 486460 487395 R TIGRFAM: cytochrome C oxidase subunit II, transmembrane region; PFAM: cytochrome c oxidase, subunit II; cytochrome c, class I; cytochrome C oxidase subunit II, transmembrane region complement(486460..487395) Geobacter uraniireducens Rf4 5166824 YP_001229204.1 CDS Gura_0415 NC_009483.1 487402 488301 R hypothetical protein complement(487402..488301) Geobacter uraniireducens Rf4 5166825 YP_001229205.1 CDS Gura_0416 NC_009483.1 488500 488685 D hypothetical protein 488500..488685 Geobacter uraniireducens Rf4 5163738 YP_001229206.1 CDS Gura_0417 NC_009483.1 488703 489047 D hypothetical protein 488703..489047 Geobacter uraniireducens Rf4 5163739 YP_001229207.1 CDS Gura_0418 NC_009483.1 489034 490905 D PFAM: V-type ATPase, 116 kDa subunit; H(+)-transporting two-sector ATPase 489034..490905 Geobacter uraniireducens Rf4 5163740 YP_001229208.1 CDS Gura_0419 NC_009483.1 490920 491132 D PFAM: H+-transporting two-sector ATPase, C subunit; H+-transporting two-sector ATPase subunit C 490920..491132 Geobacter uraniireducens Rf4 5164440 YP_001229209.1 CDS Gura_0420 NC_009483.1 491145 491708 D PFAM: H+-transporting two-sector ATPase, E subunit; H+-transporting two-sector ATPase subunit E 491145..491708 Geobacter uraniireducens Rf4 5164441 YP_001229210.1 CDS Gura_0421 NC_009483.1 492675 492995 D PFAM: Vacuolar H+-transporting two-sector ATPase, F subunit; vacuolar H+-transporting two-sector ATPase F 492675..492995 Geobacter uraniireducens Rf4 5164442 YP_001229211.1 CDS Gura_0422 NC_009483.1 493028 494602 D PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; H+-transporting two-sector ATPase subunit alpha/beta, central region 493028..494602 Geobacter uraniireducens Rf4 5166432 YP_001229212.1 CDS Gura_0423 NC_009483.1 494674 496206 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 494674..496206 Geobacter uraniireducens Rf4 5166433 YP_001229213.1 CDS Gura_0424 NC_009483.1 496447 497769 D produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex; V-type ATP synthase subunit B 496447..497769 Geobacter uraniireducens Rf4 5166434 YP_001229214.1 CDS Gura_0425 NC_009483.1 497766 498389 D TIGRFAM: V-type ATPase, D subunit; PFAM: H+-transporting two-sector ATPase, D subunit; V-type ATPase subunit D 497766..498389 Geobacter uraniireducens Rf4 5163535 YP_001229215.1 CDS Gura_0426 NC_009483.1 498649 499902 D PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 498649..499902 Geobacter uraniireducens Rf4 5163536 YP_001229216.1 CDS Gura_0427 NC_009483.1 500043 500909 D PFAM: MscS Mechanosensitive ion channel; mechanosensitive ion channel MscS 500043..500909 Geobacter uraniireducens Rf4 5163537 YP_001229217.1 CDS Gura_0428 NC_009483.1 501004 501507 R TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; molybdopterin-guanine dinucleotide biosynthesis protein B complement(501004..501507) Geobacter uraniireducens Rf4 5166820 YP_001229218.1 CDS Gura_0429 NC_009483.1 501792 501986 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 501792..501986 Geobacter uraniireducens Rf4 5166821 YP_001229219.1 CDS Gura_0430 NC_009483.1 502225 502710 D PFAM: Rubrerythrin; rubrerythrin 502225..502710 Geobacter uraniireducens Rf4 5166822 YP_001229220.1 CDS Gura_0431 NC_009483.1 502718 502921 D SMART: PAS domain containing protein; putative PAS/PAC sensor protein 502718..502921 Geobacter uraniireducens Rf4 5163502 YP_001229221.1 CDS Gura_0432 NC_009483.1 502918 503628 R PFAM: protein of unknown function DUF542, ScdA domain protein; Hemerythrin HHE cation binding domain protein; hypothetical protein complement(502918..503628) Geobacter uraniireducens Rf4 5163503 YP_001229222.1 CDS Gura_0433 NC_009483.1 504512 505813 D PFAM: Radical SAM domain protein; radical SAM domain-containing protein 504512..505813 Geobacter uraniireducens Rf4 5163504 YP_001229223.1 CDS Gura_0434 NC_009483.1 505869 506555 R PFAM: cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis transmembrane protein complement(505869..506555) Geobacter uraniireducens Rf4 5166269 YP_001229224.1 CDS Gura_0435 NC_009483.1 506552 506929 R PFAM: Thioredoxin domain; thioredoxin domain-containing protein complement(506552..506929) Geobacter uraniireducens Rf4 5166270 YP_001229225.1 CDS Gura_0436 NC_009483.1 506926 507156 R TIGRFAM: redox-active disulfide protein 2; redox-active disulfide protein 2 complement(506926..507156) Geobacter uraniireducens Rf4 5166271 YP_001229226.1 CDS Gura_0437 NC_009483.1 507194 507637 R SMART: Rhodanese domain protein; rhodanese domain-containing protein complement(507194..507637) Geobacter uraniireducens Rf4 5166796 YP_001229227.1 CDS Gura_0438 NC_009483.1 507676 508623 R PFAM: permease; permease complement(507676..508623) Geobacter uraniireducens Rf4 5166797 YP_001229228.1 CDS Gura_0439 NC_009483.1 508689 509003 R PFAM: regulatory protein, ArsR; regulatory protein ArsR complement(508689..509003) Geobacter uraniireducens Rf4 5166798 YP_001229229.1 CDS Gura_0440 NC_009483.1 509073 509345 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(509073..509345) Geobacter uraniireducens Rf4 5162819 YP_001229230.1 CDS Gura_0441 NC_009483.1 509359 509718 R heterodisulfide reductase subunit A-like protein complement(509359..509718) Geobacter uraniireducens Rf4 5162820 YP_001229231.1 CDS Gura_0442 NC_009483.1 509814 510764 R PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator complement(509814..510764) Geobacter uraniireducens Rf4 5162821 YP_001229232.1 CDS Gura_0443 NC_009483.1 510843 512018 R PFAM: transposase, IS4 family protein; transposase, IS4 family protein complement(510843..512018) Geobacter uraniireducens Rf4 5163588 YP_001229233.1 CDS Gura_0444 NC_009483.1 512289 514214 D SMART: Rhodanese domain protein; rhodanese domain-containing protein 512289..514214 Geobacter uraniireducens Rf4 5163589 YP_001229234.1 CDS Gura_0445 NC_009483.1 514299 515504 D PFAM: phosphate-selective porin O and P; phosphate-selective porin O and P 514299..515504 Geobacter uraniireducens Rf4 5162936 YP_001229235.1 CDS Gura_0446 NC_009483.1 515542 515859 D hypothetical protein 515542..515859 Geobacter uraniireducens Rf4 5162937 YP_001229236.1 CDS Gura_0447 NC_009483.1 515915 516886 D hypothetical protein 515915..516886 Geobacter uraniireducens Rf4 5162938 YP_001229237.1 CDS Gura_0448 NC_009483.1 516944 517273 D hypothetical protein 516944..517273 Geobacter uraniireducens Rf4 5163880 YP_001229238.1 CDS Gura_0449 NC_009483.1 517345 518325 R PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator complement(517345..518325) Geobacter uraniireducens Rf4 5163881 YP_001229239.1 CDS Gura_0450 NC_009483.1 518519 519895 D SMART: Rhodanese domain protein; rhodanese domain-containing protein 518519..519895 Geobacter uraniireducens Rf4 5163882 YP_001229240.1 CDS Gura_0451 NC_009483.1 519972 521177 D PFAM: phosphate-selective porin O and P; phosphate-selective porin O and P 519972..521177 Geobacter uraniireducens Rf4 5166707 YP_001229241.1 CDS Gura_0452 NC_009483.1 521226 521546 D hypothetical protein 521226..521546 Geobacter uraniireducens Rf4 5166708 YP_001229242.1 CDS Gura_0453 NC_009483.1 521603 522577 D hypothetical protein 521603..522577 Geobacter uraniireducens Rf4 5166709 YP_001229243.1 CDS Gura_0454 NC_009483.1 522635 522955 D hypothetical protein 522635..522955 Geobacter uraniireducens Rf4 5166829 YP_001229244.1 CDS Gura_0455 NC_009483.1 523111 524973 D hypothetical protein 523111..524973 Geobacter uraniireducens Rf4 5166830 YP_001229245.1 CDS Gura_0456 NC_009483.1 524939 526177 D hypothetical protein 524939..526177 Geobacter uraniireducens Rf4 5166831 YP_001229246.1 CDS Gura_0457 NC_009483.1 526132 526524 D PFAM: Rieske [2Fe-2S] domain protein; Rieske (2Fe-2S) domain-containing protein 526132..526524 Geobacter uraniireducens Rf4 5165884 YP_001229247.1 CDS Gura_0458 NC_009483.1 526546 527166 D PFAM: Cytochrome b/b6, N-terminal domain; cytochrome b/b6 domain-containing protein 526546..527166 Geobacter uraniireducens Rf4 5165885 YP_001229248.1 CDS Gura_0459 NC_009483.1 527163 527579 D hypothetical protein 527163..527579 Geobacter uraniireducens Rf4 5165886 YP_001229249.1 CDS Gura_0460 NC_009483.1 527579 528361 D hypothetical protein 527579..528361 Geobacter uraniireducens Rf4 5163111 YP_001229250.1 CDS Gura_0461 NC_009483.1 528400 528711 D hypothetical protein 528400..528711 Geobacter uraniireducens Rf4 5163112 YP_001229251.1 CDS Gura_0462 NC_009483.1 528784 529998 R TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; molybdenum cofactor synthesis domain-containing protein complement(528784..529998) Geobacter uraniireducens Rf4 5163113 YP_001229252.1 CDS Gura_0463 NC_009483.1 530094 530597 R TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; molybdopterin-guanine dinucleotide biosynthesis protein B complement(530094..530597) Geobacter uraniireducens Rf4 5162807 YP_001229253.1 CDS Gura_0464 NC_009483.1 530594 531190 R molybdopterin-guanine dinucleotide biosynthesis protein A-like protein complement(530594..531190) Geobacter uraniireducens Rf4 5162808 YP_001229254.1 CDS Gura_0465 NC_009483.1 531564 532067 R hypothetical protein complement(531564..532067) Geobacter uraniireducens Rf4 5162809 YP_001229255.1 CDS Gura_0466 NC_009483.1 532149 532715 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(532149..532715) Geobacter uraniireducens Rf4 5163230 YP_001229256.1 CDS Gura_0467 NC_009483.1 532712 533764 R TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; arsenical-resistance protein complement(532712..533764) Geobacter uraniireducens Rf4 5163231 YP_001229257.1 CDS Gura_0468 NC_009483.1 533922 534263 R PFAM: regulatory protein, ArsR; regulatory protein ArsR complement(533922..534263) Geobacter uraniireducens Rf4 5163232 YP_001229258.1 CDS Gura_0469 NC_009483.1 534546 534854 D hypothetical protein 534546..534854 Geobacter uraniireducens Rf4 5163439 YP_001229259.1 CDS Gura_0470 NC_009483.1 534865 537432 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase 534865..537432 Geobacter uraniireducens Rf4 5163440 YP_001229260.1 CDS Gura_0472 NC_009483.1 538376 539017 D PFAM: cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 538376..539017 Geobacter uraniireducens Rf4 5163332 YP_001229261.1 CDS Gura_0473 NC_009483.1 539010 539954 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 539010..539954 Geobacter uraniireducens Rf4 5163333 YP_001229262.1 CDS Gura_0474 NC_009483.1 540129 540887 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 540129..540887 Geobacter uraniireducens Rf4 5163334 YP_001229263.1 CDS Gura_0475 NC_009483.1 541145 541936 D phosphate ABC transporter periplasmic component-like protein 541145..541936 Geobacter uraniireducens Rf4 5164662 YP_001229264.1 CDS Gura_0476 NC_009483.1 542030 544522 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 542030..544522 Geobacter uraniireducens Rf4 5164663 YP_001229265.1 CDS Gura_0477 NC_009483.1 544705 547929 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase 544705..547929 Geobacter uraniireducens Rf4 5164664 YP_001229266.1 CDS Gura_0478 NC_009483.1 548132 549832 D PFAM: adenosine/AMP deaminase; adenosine/AMP deaminase 548132..549832 Geobacter uraniireducens Rf4 5165035 YP_001229267.1 CDS Gura_0479 NC_009483.1 550285 550752 D PFAM: regulatory protein, MarR; MarR family transcriptional regulator 550285..550752 Geobacter uraniireducens Rf4 5165036 YP_001229268.1 CDS Gura_0480 NC_009483.1 550973 551929 D CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)-like protein 550973..551929 Geobacter uraniireducens Rf4 5165037 YP_001229269.1 CDS Gura_0481 NC_009483.1 551947 552237 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 551947..552237 Geobacter uraniireducens Rf4 5163469 YP_001229270.1 CDS Gura_0482 NC_009483.1 552250 552834 R hypothetical protein complement(552250..552834) Geobacter uraniireducens Rf4 5163470 YP_001229271.1 CDS Gura_0483 NC_009483.1 552894 553184 R hypothetical protein complement(552894..553184) Geobacter uraniireducens Rf4 5163471 YP_001229272.1 CDS Gura_0484 NC_009483.1 553432 554202 R TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; putative CoA-substrate-specific enzyme activase complement(553432..554202) Geobacter uraniireducens Rf4 5166043 YP_001229273.1 CDS Gura_0485 NC_009483.1 554204 555205 R PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; 2-hydroxyglutaryl-CoA dehydratase subunit D complement(554204..555205) Geobacter uraniireducens Rf4 5166044 YP_001229274.1 CDS Gura_0486 NC_009483.1 555212 555553 R hypothetical protein complement(555212..555553) Geobacter uraniireducens Rf4 5166045 YP_001229275.1 CDS Gura_0487 NC_009483.1 555700 556566 D converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 555700..556566 Geobacter uraniireducens Rf4 5163559 YP_001229276.1 CDS Gura_0488 NC_009483.1 556553 557125 D hypothetical protein 556553..557125 Geobacter uraniireducens Rf4 5163560 YP_001229277.1 CDS Gura_0489 NC_009483.1 557181 559595 D PFAM: dihydropteroate synthase, DHPS; homocysteine S-methyltransferase; Methionine synthase, B12-binding module, cap domain protein; cobalamin B12-binding domain protein; homocysteine S-methyltransferase 557181..559595 Geobacter uraniireducens Rf4 5163561 YP_001229278.1 CDS Gura_0490 NC_009483.1 559720 560115 D hypothetical protein 559720..560115 Geobacter uraniireducens Rf4 5163883 YP_001229279.1 CDS Gura_0491 NC_009483.1 560149 560979 D PFAM: Transketolase domain protein; transketolase domain-containing protein 560149..560979 Geobacter uraniireducens Rf4 5163884 YP_001229280.1 CDS Gura_0492 NC_009483.1 561079 562017 D PFAM: Transketolase, central region; Transketolase domain protein; transketolase, central region 561079..562017 Geobacter uraniireducens Rf4 5163885 YP_001229281.1 CDS Gura_0493 NC_009483.1 562018 562596 D hypothetical protein 562018..562596 Geobacter uraniireducens Rf4 5164975 YP_001229282.1 CDS Gura_0494 NC_009483.1 562644 564119 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 562644..564119 Geobacter uraniireducens Rf4 5164976 YP_001229283.1 CDS Gura_0495 NC_009483.1 564227 565597 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 564227..565597 Geobacter uraniireducens Rf4 5164309 YP_001229284.1 CDS Gura_0496 NC_009483.1 565937 568750 D PFAM: NHL repeat containing protein; NHL repeat-containing protein 565937..568750 Geobacter uraniireducens Rf4 5164310 YP_001229285.1 CDS Gura_0497 NC_009483.1 568844 572005 D TIGRFAM: cytochrome C family protein; cytochrome C family protein 568844..572005 Geobacter uraniireducens Rf4 5164311 YP_001229286.1 CDS Gura_0498 NC_009483.1 572750 576595 D TIGRFAM: cytochrome C family protein; cytochrome C family protein 572750..576595 Geobacter uraniireducens Rf4 5162867 YP_001229287.1 CDS Gura_0499 NC_009483.1 576692 580831 D TIGRFAM: cytochrome C family protein; cytochrome C family protein 576692..580831 Geobacter uraniireducens Rf4 5162868 YP_001229288.1 CDS Gura_0500 NC_009483.1 580928 585418 D TIGRFAM: cytochrome C family protein; cytochrome C family protein 580928..585418 Geobacter uraniireducens Rf4 5162869 YP_001229289.1 CDS Gura_0501 NC_009483.1 585534 586907 D hypothetical protein 585534..586907 Geobacter uraniireducens Rf4 5164041 YP_001229290.1 CDS Gura_0502 NC_009483.1 587090 588334 D PFAM: glycosyl transferase, family 39; glycosyl transferase family protein 587090..588334 Geobacter uraniireducens Rf4 5164042 YP_001229291.1 CDS Gura_0503 NC_009483.1 588520 588939 D hypothetical protein 588520..588939 Geobacter uraniireducens Rf4 5164043 YP_001229292.1 CDS Gura_0504 NC_009483.1 588988 590403 R PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(588988..590403) Geobacter uraniireducens Rf4 5164809 YP_001229293.1 CDS Gura_0505 NC_009483.1 590455 591558 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(590455..591558) Geobacter uraniireducens Rf4 5164810 YP_001229294.1 CDS Gura_0506 NC_009483.1 591555 592622 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(591555..592622) Geobacter uraniireducens Rf4 5164811 YP_001229295.1 CDS Gura_0507 NC_009483.1 592619 593839 R PFAM: glycosyl transferase, family 9; glycosyl transferase family protein complement(592619..593839) Geobacter uraniireducens Rf4 5163078 YP_001229296.1 CDS Gura_0508 NC_009483.1 593836 594891 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(593836..594891) Geobacter uraniireducens Rf4 5163079 YP_001229297.1 CDS Gura_0509 NC_009483.1 594888 595967 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(594888..595967) Geobacter uraniireducens Rf4 5163080 YP_001229298.1 CDS Gura_0510 NC_009483.1 596161 597324 D hypothetical protein 596161..597324 Geobacter uraniireducens Rf4 5166896 YP_001229299.1 CDS Gura_0511 NC_009483.1 597562 598389 D PFAM: cytochrome c assembly protein; cytochrome c assembly protein 597562..598389 Geobacter uraniireducens Rf4 5166897 YP_001229300.1 CDS Gura_0512 NC_009483.1 598446 598928 D hypothetical protein 598446..598928 Geobacter uraniireducens Rf4 5166898 YP_001229301.1 CDS Gura_0513 NC_009483.1 598929 600266 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 598929..600266 Geobacter uraniireducens Rf4 5164437 YP_001229302.1 CDS Gura_0514 NC_009483.1 600610 602088 D hypothetical protein 600610..602088 Geobacter uraniireducens Rf4 5164438 YP_001229303.1 CDS Gura_0515 NC_009483.1 602447 602797 D hypothetical protein 602447..602797 Geobacter uraniireducens Rf4 5164439 YP_001229304.1 CDS Gura_0516 NC_009483.1 603129 604634 D PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 603129..604634 Geobacter uraniireducens Rf4 5165262 YP_001229305.1 CDS Gura_0517 NC_009483.1 604800 606026 R hypothetical protein complement(604800..606026) Geobacter uraniireducens Rf4 5165263 YP_001229306.1 CDS Gura_0519 NC_009483.1 606719 607318 R PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein complement(606719..607318) Geobacter uraniireducens Rf4 5163886 YP_001229307.1 CDS Gura_0520 NC_009483.1 607519 607830 R hypothetical protein complement(607519..607830) Geobacter uraniireducens Rf4 5163887 YP_001229308.1 CDS Gura_0521 NC_009483.1 608028 609179 D TIGRFAM: cytochrome C family protein; cytochrome C family protein 608028..609179 Geobacter uraniireducens Rf4 5163888 YP_001229309.1 CDS Gura_0522 NC_009483.1 609362 610675 D ResB protein required for cytochrome c biosynthesis-like protein 609362..610675 Geobacter uraniireducens Rf4 5165404 YP_001229310.1 CDS Gura_0523 NC_009483.1 610672 611502 D PFAM: cytochrome c assembly protein; cytochrome c assembly protein 610672..611502 Geobacter uraniireducens Rf4 5165405 YP_001229311.1 CDS Gura_0524 NC_009483.1 611566 612672 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(611566..612672) Geobacter uraniireducens Rf4 5165406 YP_001229312.1 CDS Gura_0525 NC_009483.1 612897 613631 D response regulator receiver protein 612897..613631 Geobacter uraniireducens Rf4 5165327 YP_001229313.1 CDS Gura_0526 NC_009483.1 614257 615789 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein 614257..615789 Geobacter uraniireducens Rf4 5165328 YP_001229314.1 CDS Gura_0527 NC_009483.1 615909 617039 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 615909..617039 Geobacter uraniireducens Rf4 5165329 YP_001229315.1 CDS Gura_0528 NC_009483.1 617238 620318 D PFAM: acriflavin resistance protein; acriflavin resistance protein 617238..620318 Geobacter uraniireducens Rf4 5164769 YP_001229316.1 CDS Gura_0529 NC_009483.1 620320 621345 D hypothetical protein 620320..621345 Geobacter uraniireducens Rf4 5164770 YP_001229317.1 CDS Gura_0530 NC_009483.1 621360 622157 R PFAM: regulatory protein, IclR; regulatory protein IclR complement(621360..622157) Geobacter uraniireducens Rf4 5164771 YP_001229318.1 CDS Gura_0531 NC_009483.1 622464 622640 D hypothetical protein 622464..622640 Geobacter uraniireducens Rf4 5165330 YP_001229319.1 CDS Gura_0532 NC_009483.1 622711 623082 D PFAM: regulatory protein, IclR; regulatory protein IclR 622711..623082 Geobacter uraniireducens Rf4 5165331 YP_001229320.1 CDS Gura_0533 NC_009483.1 623107 625395 R PFAM: outer membrane efflux protein; Sporulation domain protein; outer membrane efflux protein complement(623107..625395) Geobacter uraniireducens Rf4 5165332 YP_001229321.1 CDS Gura_0534 NC_009483.1 625517 626065 R hypothetical protein complement(625517..626065) Geobacter uraniireducens Rf4 5165091 YP_001229322.1 CDS Gura_0535 NC_009483.1 626723 627712 D TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; putative ribonuclease BN 626723..627712 Geobacter uraniireducens Rf4 5165092 YP_001229323.1 CDS Gura_0536 NC_009483.1 627749 628741 D PFAM: purine or other phosphorylase, family 1; purine phosphorylase family 1 627749..628741 Geobacter uraniireducens Rf4 5165093 YP_001229324.1 CDS Gura_0537 NC_009483.1 628707 629951 R PFAM: amidohydrolase 2; amidohydrolase 2 complement(628707..629951) Geobacter uraniireducens Rf4 5163040 YP_001229325.1 CDS Gura_0538 NC_009483.1 630033 630488 R hypothetical protein complement(630033..630488) Geobacter uraniireducens Rf4 5163041 YP_001229326.1 CDS Gura_0539 NC_009483.1 630750 631673 R hypothetical protein complement(630750..631673) Geobacter uraniireducens Rf4 5163042 YP_001229327.1 CDS Gura_0540 NC_009483.1 632075 633361 R hypothetical protein complement(632075..633361) Geobacter uraniireducens Rf4 5166066 YP_001229328.1 CDS Gura_0541 NC_009483.1 633551 635314 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 633551..635314 Geobacter uraniireducens Rf4 5166067 YP_001229329.1 CDS Gura_0542 NC_009483.1 635374 635883 R TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; hydrogenase maturation peptidase superfamily; PFAM: peptidase M52, hydrogen uptake protein; hydrogenase expression/formation protein complement(635374..635883) Geobacter uraniireducens Rf4 5166068 YP_001229330.1 CDS Gura_0543 NC_009483.1 635890 636546 R TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; Ni/Fe-hydrogenase, b-type cytochrome subunit complement(635890..636546) Geobacter uraniireducens Rf4 5163160 YP_001229331.1 CDS Gura_0544 NC_009483.1 636557 638257 R PFAM: nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase, large subunit complement(636557..638257) Geobacter uraniireducens Rf4 5163161 YP_001229332.1 CDS Gura_0545 NC_009483.1 638262 639383 R TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein; hydrogenase (NiFe) small subunit HydA complement(638262..639383) Geobacter uraniireducens Rf4 5165525 YP_001229333.1 CDS Gura_0546 NC_009483.1 639679 640479 R hypothetical protein complement(639679..640479) Geobacter uraniireducens Rf4 5165526 YP_001229334.1 CDS Gura_0547 NC_009483.1 640745 643831 D PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; hypothetical protein 640745..643831 Geobacter uraniireducens Rf4 5165527 YP_001229335.1 CDS Gura_0548 NC_009483.1 643825 645450 D PFAM: N-6 DNA methylase; N-6 DNA methylase 643825..645450 Geobacter uraniireducens Rf4 5165026 YP_001229336.1 CDS Gura_0549 NC_009483.1 645443 646600 D PFAM: restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit 645443..646600 Geobacter uraniireducens Rf4 5165027 YP_001229337.1 CDS Gura_0550 NC_009483.1 646648 648261 D hypothetical protein 646648..648261 Geobacter uraniireducens Rf4 5165028 YP_001229338.1 CDS Gura_0551 NC_009483.1 648468 651281 R PFAM: sigma-54 factor, interaction domain-containing protein; GAF domain protein; putative GAF sensor protein complement(648468..651281) Geobacter uraniireducens Rf4 5163675 YP_001229339.1 CDS Gura_0552 NC_009483.1 651449 653302 R hypothetical protein complement(651449..653302) Geobacter uraniireducens Rf4 5163676 YP_001229340.1 CDS Gura_0553 NC_009483.1 653360 654115 R PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein complement(653360..654115) Geobacter uraniireducens Rf4 5163677 YP_001229341.1 CDS Gura_0554 NC_009483.1 654954 655163 D PFAM: protein of unknown function UPF0150; hypothetical protein 654954..655163 Geobacter uraniireducens Rf4 5163934 YP_001229342.1 CDS Gura_0555 NC_009483.1 655160 655402 D PFAM: YcfA family protein; hypothetical protein 655160..655402 Geobacter uraniireducens Rf4 5163935 YP_001229343.1 CDS Gura_0556 NC_009483.1 655860 656687 D hypothetical protein 655860..656687 Geobacter uraniireducens Rf4 5163936 YP_001229344.1 CDS Gura_0557 NC_009483.1 656940 657470 D hypothetical protein 656940..657470 Geobacter uraniireducens Rf4 5162715 YP_001229345.1 CDS Gura_0558 NC_009483.1 658178 658918 R PFAM: IstB domain protein ATP-binding protein; IstB ATP binding N-terminal domain protein; SMART: AAA ATPase; IstB ATP binding domain-containing protein complement(658178..658918) Geobacter uraniireducens Rf4 5162716 YP_001229346.1 CDS Gura_0559 NC_009483.1 658915 660468 R PFAM: Integrase, catalytic region; integrase catalytic subunit complement(658915..660468) Geobacter uraniireducens Rf4 5162717 YP_001229347.1 CDS Gura_0560 NC_009483.1 660617 661381 D PFAM: putative transposase; putative transposase 660617..661381 Geobacter uraniireducens Rf4 5164226 YP_001229348.1 CDS Gura_0561 NC_009483.1 661998 663239 D PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 661998..663239 Geobacter uraniireducens Rf4 5164227 YP_001229349.1 CDS Gura_0562 NC_009483.1 663976 664266 D hypothetical protein 663976..664266 Geobacter uraniireducens Rf4 5164228 YP_001229350.1 CDS Gura_0563 NC_009483.1 664256 664594 D hypothetical protein 664256..664594 Geobacter uraniireducens Rf4 5165243 YP_001229351.1 CDS Gura_0564 NC_009483.1 664629 665042 D hypothetical protein 664629..665042 Geobacter uraniireducens Rf4 5165244 YP_001229352.1 CDS Gura_0567 NC_009483.1 666130 666456 D hypothetical protein 666130..666456 Geobacter uraniireducens Rf4 5165743 YP_001229353.1 CDS Gura_0568 NC_009483.1 666526 666954 D hypothetical protein 666526..666954 Geobacter uraniireducens Rf4 5165744 YP_001229354.1 CDS Gura_0569 NC_009483.1 666983 667270 D PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 666983..667270 Geobacter uraniireducens Rf4 5166203 YP_001229355.1 CDS Gura_0570 NC_009483.1 667301 667696 D hypothetical protein 667301..667696 Geobacter uraniireducens Rf4 5166204 YP_001229356.1 CDS Gura_0571 NC_009483.1 667757 669268 R PFAM: protein of unknown function DUF195; hypothetical protein complement(667757..669268) Geobacter uraniireducens Rf4 5166205 YP_001229357.1 CDS Gura_0572 NC_009483.1 669302 670102 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(669302..670102) Geobacter uraniireducens Rf4 5165715 YP_001229358.1 CDS Gura_0573 NC_009483.1 670510 675528 D TIGRFAM: cytochrome C family protein; cytochrome C family protein 670510..675528 Geobacter uraniireducens Rf4 5165716 YP_001229359.1 CDS Gura_0574 NC_009483.1 675531 688832 D PFAM: Fibronectin, type III domain protein; SMART: LamG domain protein jellyroll fold domain protein; fibronectin I domain-containing protein 675531..688832 Geobacter uraniireducens Rf4 5165717 YP_001229360.1 CDS Gura_0575 NC_009483.1 689187 691196 D hypothetical protein 689187..691196 Geobacter uraniireducens Rf4 5166844 YP_001229361.1 CDS Gura_0576 NC_009483.1 691198 691992 D hypothetical protein 691198..691992 Geobacter uraniireducens Rf4 5166845 YP_001229362.1 CDS Gura_0577 NC_009483.1 692257 692661 R PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(692257..692661) Geobacter uraniireducens Rf4 5166846 YP_001229363.1 CDS Gura_0578 NC_009483.1 692778 694583 R TIGRFAM: exodeoxyribonuclease V, alpha subunit; exodeoxyribonuclease V subunit alpha complement(692778..694583) Geobacter uraniireducens Rf4 5164259 YP_001229364.1 CDS Gura_0579 NC_009483.1 694745 698002 R TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; exodeoxyribonuclease V subunit beta complement(694745..698002) Geobacter uraniireducens Rf4 5164260 YP_001229365.1 CDS Gura_0580 NC_009483.1 698148 698372 R hypothetical protein complement(698148..698372) Geobacter uraniireducens Rf4 5164261 YP_001229366.1 CDS Gura_0581 NC_009483.1 698362 698622 R PFAM: protein of unknown function DUF497; hypothetical protein complement(698362..698622) Geobacter uraniireducens Rf4 5164708 YP_001229367.1 CDS Gura_0582 NC_009483.1 698679 701954 R TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V, RecC subunit; exodeoxyribonuclease V subunit gamma complement(698679..701954) Geobacter uraniireducens Rf4 5164709 YP_001229368.1 CDS Gura_0583 NC_009483.1 701989 703101 R TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; homoserine O-acetyltransferase complement(701989..703101) Geobacter uraniireducens Rf4 5164710 YP_001229369.1 CDS Gura_0584 NC_009483.1 703114 703431 R hypothetical protein complement(703114..703431) Geobacter uraniireducens Rf4 5162958 YP_001229370.1 CDS Gura_0585 NC_009483.1 703493 703804 D hypothetical protein 703493..703804 Geobacter uraniireducens Rf4 5162959 YP_001229371.1 CDS Gura_0586 NC_009483.1 703788 704174 D PFAM: HEPN domain protein; HEPN domain-containing protein 703788..704174 Geobacter uraniireducens Rf4 5162960 YP_001229372.1 CDS Gura_0587 NC_009483.1 704345 704515 R hypothetical protein complement(704345..704515) Geobacter uraniireducens Rf4 5165205 YP_001229373.1 CDS Gura_0588 NC_009483.1 704512 705375 R PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; 2-hydroxy-3-oxopropionate reductase complement(704512..705375) Geobacter uraniireducens Rf4 5165206 YP_001229374.1 CDS Gura_0589 NC_009483.1 705409 706146 R hypothetical protein complement(705409..706146) Geobacter uraniireducens Rf4 5165207 YP_001229375.1 CDS Gura_0590 NC_009483.1 706106 706489 R hypothetical protein complement(706106..706489) Geobacter uraniireducens Rf4 5165392 YP_001229376.1 CDS Gura_0591 NC_009483.1 706786 707127 R PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator complement(706786..707127) Geobacter uraniireducens Rf4 5165393 YP_001229377.1 CDS Gura_0592 NC_009483.1 707242 710109 D PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases-like; helicase domain-containing protein 707242..710109 Geobacter uraniireducens Rf4 5165394 YP_001229378.1 CDS Gura_0593 NC_009483.1 710157 713378 D PFAM: DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 710157..713378 Geobacter uraniireducens Rf4 5165241 YP_001229379.1 CDS Gura_0594 NC_009483.1 713383 716673 D hypothetical protein 713383..716673 Geobacter uraniireducens Rf4 5165242 YP_001229380.1 CDS Gura_0595 NC_009483.1 716800 717216 R PFAM: PilT protein domain protein; PilT domain-containing protein complement(716800..717216) Geobacter uraniireducens Rf4 5163326 YP_001229381.1 CDS Gura_0596 NC_009483.1 717206 717436 R hypothetical protein complement(717206..717436) Geobacter uraniireducens Rf4 5163327 YP_001229382.1 CDS Gura_0597 NC_009483.1 718655 720193 D PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 718655..720193 Geobacter uraniireducens Rf4 5163328 YP_001229383.1 CDS Gura_0598 NC_009483.1 720376 723072 D PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases-like; non-specific serine/threonine protein kinase 720376..723072 Geobacter uraniireducens Rf4 5163138 YP_001229384.1 CDS Gura_0599 NC_009483.1 723431 724573 D ATPase AAA 723431..724573 Geobacter uraniireducens Rf4 5163139 YP_001229385.1 CDS Gura_0600 NC_009483.1 725017 725229 R PFAM: protein of unknown function UPF0150; hypothetical protein complement(725017..725229) Geobacter uraniireducens Rf4 5163140 YP_001229386.1 CDS Gura_0601 NC_009483.1 725232 725402 R PFAM: YcfA family protein; hypothetical protein complement(725232..725402) Geobacter uraniireducens Rf4 5163850 YP_001229387.1 CDS Gura_0602 NC_009483.1 725576 725989 D hypothetical protein 725576..725989 Geobacter uraniireducens Rf4 5163851 YP_001229388.1 CDS Gura_0603 NC_009483.1 726169 726627 D PFAM: Activator of Hsp90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein 726169..726627 Geobacter uraniireducens Rf4 5163852 YP_001229389.1 CDS Gura_0604 NC_009483.1 726859 727275 D hypothetical protein 726859..727275 Geobacter uraniireducens Rf4 5165841 YP_001229390.1 CDS Gura_0605 NC_009483.1 727272 727514 D hypothetical protein 727272..727514 Geobacter uraniireducens Rf4 5165842 YP_001229391.1 CDS Gura_0606 NC_009483.1 727560 728639 D PFAM: zinc finger, SWIM domain protein; zinc finger SWIM domain-containing protein 727560..728639 Geobacter uraniireducens Rf4 5165843 YP_001229392.1 CDS Gura_0607 NC_009483.1 728869 730593 R TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; para-aminobenzoate synthase subunit I complement(728869..730593) Geobacter uraniireducens Rf4 5163970 YP_001229393.1 CDS Gura_0608 NC_009483.1 730596 731453 R hypothetical protein complement(730596..731453) Geobacter uraniireducens Rf4 5163971 YP_001229394.1 CDS Gura_0609 NC_009483.1 731548 731919 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 731548..731919 Geobacter uraniireducens Rf4 5163972 YP_001229395.1 CDS Gura_0610 NC_009483.1 732030 732497 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(732030..732497) Geobacter uraniireducens Rf4 5164623 YP_001229396.1 CDS Gura_0611 NC_009483.1 732494 733012 R PFAM: Appr-1-p processing domain protein; appr-1-p processing domain-containing protein complement(732494..733012) Geobacter uraniireducens Rf4 5164624 YP_001229397.1 CDS Gura_0612 NC_009483.1 733461 735092 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 733461..735092 Geobacter uraniireducens Rf4 5164625 YP_001229398.1 CDS Gura_0613 NC_009483.1 735125 735466 R hypothetical protein complement(735125..735466) Geobacter uraniireducens Rf4 5163361 YP_001229399.1 CDS Gura_0614 NC_009483.1 735468 735749 R hypothetical protein complement(735468..735749) Geobacter uraniireducens Rf4 5163362 YP_001229400.1 CDS Gura_0615 NC_009483.1 735896 737128 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(735896..737128) Geobacter uraniireducens Rf4 5163363 YP_001229401.1 CDS Gura_0616 NC_009483.1 737128 737721 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(737128..737721) Geobacter uraniireducens Rf4 5163191 YP_001229402.1 CDS Gura_0617 NC_009483.1 738123 738995 R CO dehydrogenase maturation factor-like protein complement(738123..738995) Geobacter uraniireducens Rf4 5163192 YP_001229403.1 CDS Gura_0618 NC_009483.1 739010 740935 R TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane; carbon-monoxide dehydrogenase, catalytic subunit complement(739010..740935) Geobacter uraniireducens Rf4 5163193 YP_001229404.1 CDS Gura_0619 NC_009483.1 741242 741946 R PFAM: LytTr DNA-binding region; response regulator receiver protein complement(741242..741946) Geobacter uraniireducens Rf4 5164986 YP_001229405.1 CDS Gura_0620 NC_009483.1 742050 743732 R TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; acetolactate synthase, large subunit type complement(742050..743732) Geobacter uraniireducens Rf4 5164987 YP_001229406.1 CDS Gura_0621 NC_009483.1 744186 745904 R hypothetical protein complement(744186..745904) Geobacter uraniireducens Rf4 5164988 YP_001229407.1 CDS Gura_0622 NC_009483.1 746242 747525 D PFAM: regulatory protein, LuxR; response regulator receiver protein 746242..747525 Geobacter uraniireducens Rf4 5165400 YP_001229408.1 CDS Gura_0623 NC_009483.1 747653 748099 R PFAM: Cupin 2, conserved barrel domain protein; cupin 2 domain-containing protein complement(747653..748099) Geobacter uraniireducens Rf4 5165401 YP_001229409.1 CDS Gura_0624 NC_009483.1 748173 749021 R PFAM: protein of unknown function DUF161; hypothetical protein complement(748173..749021) Geobacter uraniireducens Rf4 5165402 YP_001229410.1 CDS Gura_0625 NC_009483.1 749029 749529 R hypothetical protein complement(749029..749529) Geobacter uraniireducens Rf4 5166543 YP_001229411.1 CDS Gura_0626 NC_009483.1 749601 750401 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(749601..750401) Geobacter uraniireducens Rf4 5166544 YP_001229412.1 CDS Gura_0627 NC_009483.1 750485 750991 R hypothetical protein complement(750485..750991) Geobacter uraniireducens Rf4 5166545 YP_001229413.1 CDS Gura_0628 NC_009483.1 751016 751822 R PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(751016..751822) Geobacter uraniireducens Rf4 5165616 YP_001229414.1 CDS Gura_0629 NC_009483.1 751838 752260 R nucleic acid binding protein complement(751838..752260) Geobacter uraniireducens Rf4 5165617 YP_001229415.1 CDS Gura_0630 NC_009483.1 752257 752550 R TIGRFAM: prevent-host-death family protein; prevent-host-death family protein complement(752257..752550) Geobacter uraniireducens Rf4 5165618 YP_001229416.1 CDS Gura_0631 NC_009483.1 752792 754306 R ankyrin repeat-containing protein complement(752792..754306) Geobacter uraniireducens Rf4 5166402 YP_001229417.1 CDS Gura_0632 NC_009483.1 754528 755574 R PFAM: protein of unknown function UPF0118; hypothetical protein complement(754528..755574) Geobacter uraniireducens Rf4 5166403 YP_001229418.1 CDS Gura_0633 NC_009483.1 755578 756624 R PFAM: protein of unknown function UPF0118; hypothetical protein complement(755578..756624) Geobacter uraniireducens Rf4 5166404 YP_001229419.1 CDS Gura_0634 NC_009483.1 756681 757118 R hypothetical protein complement(756681..757118) Geobacter uraniireducens Rf4 5166983 YP_001229420.1 CDS Gura_0635 NC_009483.1 757254 757979 D PFAM: metallophosphoesterase; metallophosphoesterase 757254..757979 Geobacter uraniireducens Rf4 5166984 YP_001229421.1 CDS Gura_0636 NC_009483.1 757986 758219 R PFAM: protein of unknown function UPF0153; hypothetical protein complement(757986..758219) Geobacter uraniireducens Rf4 5166985 YP_001229422.1 CDS Gura_0637 NC_009483.1 758294 759643 R PFAM: penicillin-binding protein, transpeptidase; penicillin-binding protein, transpeptidase complement(758294..759643) Geobacter uraniireducens Rf4 5163817 YP_001229423.1 CDS Gura_0638 NC_009483.1 759801 761150 R TIGRFAM: putative ribonuclease BN; PFAM: protein of unknown function UPF0074; ribonuclease BN; putative ribonuclease BN complement(759801..761150) Geobacter uraniireducens Rf4 5163818 YP_001229424.1 CDS Gura_0639 NC_009483.1 761429 761743 R hypothetical protein complement(761429..761743) Geobacter uraniireducens Rf4 5163819 YP_001229425.1 CDS Gura_0640 NC_009483.1 761748 762137 R hypothetical protein complement(761748..762137) Geobacter uraniireducens Rf4 5162673 YP_001229426.1 CDS Gura_0641 NC_009483.1 762294 763160 R hypothetical protein complement(762294..763160) Geobacter uraniireducens Rf4 5162674 YP_001229427.1 CDS Gura_0642 NC_009483.1 763466 765427 D hypothetical protein 763466..765427 Geobacter uraniireducens Rf4 5162675 YP_001229428.1 CDS Gura_0643 NC_009483.1 765525 765863 D hypothetical protein 765525..765863 Geobacter uraniireducens Rf4 5163391 YP_001229429.1 CDS Gura_0644 NC_009483.1 765996 766628 R PFAM: multiple antibiotic resistance (MarC)-related protein; multiple antibiotic resistance (MarC)-like protein complement(765996..766628) Geobacter uraniireducens Rf4 5163392 YP_001229430.1 CDS Gura_0645 NC_009483.1 767599 769002 D PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 767599..769002 Geobacter uraniireducens Rf4 5165819 YP_001229431.1 CDS hppA NC_009483.1 769094 771139 R pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase complement(769094..771139) Geobacter uraniireducens Rf4 5165820 YP_001229432.1 CDS Gura_0647 NC_009483.1 771370 772629 D hypothetical protein 771370..772629 Geobacter uraniireducens Rf4 5165821 YP_001229433.1 CDS Gura_0648 NC_009483.1 772720 774099 D PFAM: FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 772720..774099 Geobacter uraniireducens Rf4 5166346 YP_001229434.1 CDS Gura_0649 NC_009483.1 774201 775466 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 774201..775466 Geobacter uraniireducens Rf4 5166347 YP_001229435.1 CDS Gura_0650 NC_009483.1 775634 776197 D PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; XRE family transcriptional regulator 775634..776197 Geobacter uraniireducens Rf4 5166348 YP_001229436.1 CDS Gura_0651 NC_009483.1 776334 778058 D PFAM: carboxyl transferase; propionyl-CoA carboxylase 776334..778058 Geobacter uraniireducens Rf4 5165568 YP_001229437.1 CDS Gura_0652 NC_009483.1 778233 781121 D PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; biotin/lipoyl attachment domain-containing protein 778233..781121 Geobacter uraniireducens Rf4 5165569 YP_001229438.1 CDS Gura_0653 NC_009483.1 781228 781437 R hypothetical protein complement(781228..781437) Geobacter uraniireducens Rf4 5165570 YP_001229439.1 CDS Gura_0654 NC_009483.1 781975 783630 D TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase large subunit 781975..783630 Geobacter uraniireducens Rf4 5163141 YP_001229440.1 CDS Gura_0655 NC_009483.1 783698 784102 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 783698..784102 Geobacter uraniireducens Rf4 5163142 YP_001229441.1 CDS Gura_0656 NC_009483.1 784720 786108 D hypothetical protein 784720..786108 Geobacter uraniireducens Rf4 5163143 YP_001229442.1 CDS Gura_0657 NC_009483.1 786222 786509 D hypothetical protein 786222..786509 Geobacter uraniireducens Rf4 5163194 YP_001229443.1 CDS Gura_0658 NC_009483.1 786693 787106 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 786693..787106 Geobacter uraniireducens Rf4 5163195 YP_001229444.1 CDS Gura_0659 NC_009483.1 787096 787518 D PFAM: protein of unknown function DUF86; hypothetical protein 787096..787518 Geobacter uraniireducens Rf4 5163196 YP_001229445.1 CDS Gura_0660 NC_009483.1 787734 789212 D hypothetical protein 787734..789212 Geobacter uraniireducens Rf4 5165911 YP_001229446.1 CDS hisZ NC_009483.1 789381 790697 D May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 789381..790697 Geobacter uraniireducens Rf4 5165912 YP_001229447.1 CDS Gura_0662 NC_009483.1 790708 792003 D catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 790708..792003 Geobacter uraniireducens Rf4 5165913 YP_001229448.2 CDS Gura_0663 NC_009483.1 792813 794438 D catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 792813..794438 Geobacter uraniireducens Rf4 5165824 YP_001229449.1 CDS Gura_0664 NC_009483.1 794539 795003 D hypothetical protein 794539..795003 Geobacter uraniireducens Rf4 5165825 YP_001229450.1 CDS Gura_0665 NC_009483.1 795032 796486 D PFAM: cytochrome c552; nitrite reductase 795032..796486 Geobacter uraniireducens Rf4 5166555 YP_001229451.1 CDS Gura_0666 NC_009483.1 796661 797185 D PFAM: HPP family protein+B94; HPP family protein 796661..797185 Geobacter uraniireducens Rf4 5166556 YP_001229452.1 CDS Gura_0667 NC_009483.1 797346 798170 D PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; OB-fold tRNA/helicase-type nucleic acid binding protein 797346..798170 Geobacter uraniireducens Rf4 5166557 YP_001229453.1 CDS Gura_0668 NC_009483.1 798483 800588 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; putative adenylate/guanylate cyclase 798483..800588 Geobacter uraniireducens Rf4 5166712 YP_001229454.1 CDS Gura_0669 NC_009483.1 800585 801055 D hypothetical protein 800585..801055 Geobacter uraniireducens Rf4 5166713 YP_001229455.1 CDS Gura_0670 NC_009483.1 801052 801918 D PFAM: peptidase M48, Ste24p; peptidase M48, Ste24p 801052..801918 Geobacter uraniireducens Rf4 5166714 YP_001229456.1 CDS Gura_0671 NC_009483.1 801970 803244 D PFAM: peptidase M48, Ste24p; Ste24 endopeptidase 801970..803244 Geobacter uraniireducens Rf4 5167013 YP_001229457.1 CDS Gura_0672 NC_009483.1 803348 804757 D hypothetical protein 803348..804757 Geobacter uraniireducens Rf4 5167014 YP_001229458.1 CDS Gura_0673 NC_009483.1 805165 806007 R hypothetical protein complement(805165..806007) Geobacter uraniireducens Rf4 5167015 YP_001229459.1 CDS Gura_0674 NC_009483.1 806004 806552 R hypothetical protein complement(806004..806552) Geobacter uraniireducens Rf4 5165315 YP_001229460.1 CDS Gura_0675 NC_009483.1 806549 807886 R TIGRFAM: general secretion pathway protein L; general secretion pathway protein L complement(806549..807886) Geobacter uraniireducens Rf4 5165316 YP_001229461.1 CDS Gura_0676 NC_009483.1 807892 808797 R PFAM: General secretion pathway protein K; general secretion pathway protein K complement(807892..808797) Geobacter uraniireducens Rf4 5165317 YP_001229462.1 CDS Gura_0677 NC_009483.1 808794 809366 R hypothetical protein complement(808794..809366) Geobacter uraniireducens Rf4 5163341 YP_001229463.1 CDS Gura_0678 NC_009483.1 809398 809733 R hypothetical protein complement(809398..809733) Geobacter uraniireducens Rf4 5163342 YP_001229464.1 CDS Gura_0679 NC_009483.1 809730 810317 R hypothetical protein complement(809730..810317) Geobacter uraniireducens Rf4 5162930 YP_001229465.1 CDS Gura_0680 NC_009483.1 810320 810763 R TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; general secretion pathway protein G complement(810320..810763) Geobacter uraniireducens Rf4 5162931 YP_001229466.1 CDS Gura_0681 NC_009483.1 810841 812052 R TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; general secretion pathway protein F complement(810841..812052) Geobacter uraniireducens Rf4 5162932 YP_001229467.1 CDS Gura_0682 NC_009483.1 812033 813595 R TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase; general secretory pathway protein E complement(812033..813595) Geobacter uraniireducens Rf4 5165061 YP_001229468.1 CDS Gura_0683 NC_009483.1 813614 815539 R TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; general secretion pathway protein D complement(813614..815539) Geobacter uraniireducens Rf4 5165062 YP_001229469.1 CDS Gura_0684 NC_009483.1 815660 816538 R Type II secretory pathway component PulC-like protein complement(815660..816538) Geobacter uraniireducens Rf4 5165063 YP_001229470.1 CDS Gura_0685 NC_009483.1 816833 817552 D PFAM: purine or other phosphorylase, family 1; purine phosphorylase family 1 816833..817552 Geobacter uraniireducens Rf4 5165371 YP_001229471.1 CDS Gura_0686 NC_009483.1 817594 818427 D PFAM: protein of unknown function DUF191; hypothetical protein 817594..818427 Geobacter uraniireducens Rf4 5165372 YP_001229472.1 CDS Gura_0687 NC_009483.1 818676 821420 D TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; putative PAS/PAC sensor protein 818676..821420 Geobacter uraniireducens Rf4 5165373 YP_001229473.1 CDS Gura_0688 NC_009483.1 821728 822153 D TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; rare lipoprotein A 821728..822153 Geobacter uraniireducens Rf4 5164594 YP_001229474.1 CDS Gura_0689 NC_009483.1 822257 824155 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein complement(822257..824155) Geobacter uraniireducens Rf4 5164595 YP_001229475.1 CDS Gura_0690 NC_009483.1 824449 824892 D PFAM: heat shock protein Hsp20; heat shock protein Hsp20 824449..824892 Geobacter uraniireducens Rf4 5164596 YP_001229476.1 CDS Gura_0691 NC_009483.1 824904 827357 D TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La 824904..827357 Geobacter uraniireducens Rf4 5164499 YP_001229477.1 CDS Gura_0692 NC_009483.1 827354 828337 D TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; thiamine-monophosphate kinase 827354..828337 Geobacter uraniireducens Rf4 5164500 YP_001229478.1 CDS Gura_0693 NC_009483.1 828354 828755 R PFAM: protein of unknown function UPF0047; hypothetical protein complement(828354..828755) Geobacter uraniireducens Rf4 5164501 YP_001229479.1 CDS Gura_0694 NC_009483.1 828875 830206 R hypothetical protein complement(828875..830206) Geobacter uraniireducens Rf4 5165079 YP_001229480.1 CDS Gura_0697 NC_009483.1 831651 832892 R PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein complement(831651..832892) Geobacter uraniireducens Rf4 5165199 YP_001229481.1 CDS Gura_0698 NC_009483.1 833100 833783 D hypothetical protein 833100..833783 Geobacter uraniireducens Rf4 5165200 YP_001229482.1 CDS Gura_0699 NC_009483.1 833832 834947 D PFAM: acyltransferase 3; acyltransferase 3 833832..834947 Geobacter uraniireducens Rf4 5165201 YP_001229483.1 CDS Gura_0700 NC_009483.1 834978 835370 R hypothetical protein complement(834978..835370) Geobacter uraniireducens Rf4 5166522 YP_001229484.1 CDS Gura_0701 NC_009483.1 835604 836047 R hypothetical protein complement(835604..836047) Geobacter uraniireducens Rf4 5166523 YP_001229485.1 CDS Gura_0702 NC_009483.1 836107 836586 R PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(836107..836586) Geobacter uraniireducens Rf4 5166524 YP_001229486.1 CDS Gura_0703 NC_009483.1 836776 837339 D TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 836776..837339 Geobacter uraniireducens Rf4 5163529 YP_001229487.1 CDS Gura_0704 NC_009483.1 837425 837664 D hypothetical protein 837425..837664 Geobacter uraniireducens Rf4 5163530 YP_001229488.1 CDS Gura_0705 NC_009483.1 837692 838336 D similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; putative translaldolase 837692..838336 Geobacter uraniireducens Rf4 5163531 YP_001229489.1 CDS Gura_0706 NC_009483.1 838933 840594 D hypothetical protein 838933..840594 Geobacter uraniireducens Rf4 5163520 YP_001229490.1 CDS Gura_0707 NC_009483.1 840797 841429 R hypothetical protein complement(840797..841429) Geobacter uraniireducens Rf4 5163521 YP_001229491.1 CDS Gura_0708 NC_009483.1 841534 843348 D catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase 841534..843348 Geobacter uraniireducens Rf4 5163522 YP_001229492.1 CDS Gura_0709 NC_009483.1 843368 843781 D hypothetical protein 843368..843781 Geobacter uraniireducens Rf4 5162882 YP_001229493.1 CDS Gura_0710 NC_009483.1 843813 844487 D PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; nitrite and sulfite reductase 4Fe-4S region 843813..844487 Geobacter uraniireducens Rf4 5162883 YP_001229494.1 CDS Gura_0711 NC_009483.1 844575 845333 D TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 844575..845333 Geobacter uraniireducens Rf4 5162884 YP_001229495.1 CDS Gura_0712 NC_009483.1 845685 846662 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 845685..846662 Geobacter uraniireducens Rf4 5165421 YP_001229496.1 CDS Gura_0713 NC_009483.1 846758 847183 R PFAM: PilT protein domain protein; PilT domain-containing protein complement(846758..847183) Geobacter uraniireducens Rf4 5165422 YP_001229497.1 CDS Gura_0714 NC_009483.1 847180 847461 R TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein complement(847180..847461) Geobacter uraniireducens Rf4 5165423 YP_001229498.1 CDS Gura_0715 NC_009483.1 847700 848119 R PFAM: zinc finger, DksA/TraR C4-type; TraR/DksA family transcriptional regulator complement(847700..848119) Geobacter uraniireducens Rf4 5162778 YP_001229499.1 CDS Gura_0716 NC_009483.1 848231 849577 R TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying enzyme YliG complement(848231..849577) Geobacter uraniireducens Rf4 5162779 YP_001229500.1 CDS Gura_0717 NC_009483.1 849691 850176 R putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein complement(849691..850176) Geobacter uraniireducens Rf4 5162780 YP_001229501.1 CDS Gura_0718 NC_009483.1 850223 850948 R PFAM: outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA complement(850223..850948) Geobacter uraniireducens Rf4 5165324 YP_001229502.1 CDS Gura_0719 NC_009483.1 851041 851874 R PFAM: outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA complement(851041..851874) Geobacter uraniireducens Rf4 5165325 YP_001229503.1 CDS Gura_0720 NC_009483.1 851985 852593 R PFAM: CheC domain protein; CheC, inhibitor of MCP methylation complement(851985..852593) Geobacter uraniireducens Rf4 5165326 YP_001229504.1 CDS Gura_0721 NC_009483.1 852623 854257 R PFAM: CheW domain protein; ATP-binding region, ATPase domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; CheA signal transduction histidine kinase complement(852623..854257) Geobacter uraniireducens Rf4 5164605 YP_001229505.1 CDS Gura_0722 NC_009483.1 854261 854626 R PFAM: response regulator receiver; response regulator receiver protein complement(854261..854626) Geobacter uraniireducens Rf4 5164606 YP_001229506.1 CDS Gura_0723 NC_009483.1 854674 855102 R PFAM: CheW domain protein; putative CheW protein complement(854674..855102) Geobacter uraniireducens Rf4 5164607 YP_001229507.1 CDS Gura_0724 NC_009483.1 855099 856379 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(855099..856379) Geobacter uraniireducens Rf4 5164396 YP_001229508.1 CDS Gura_0725 NC_009483.1 856603 857478 R PFAM: MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase complement(856603..857478) Geobacter uraniireducens Rf4 5164397 YP_001229509.1 CDS Gura_0726 NC_009483.1 857721 858059 R PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(857721..858059) Geobacter uraniireducens Rf4 5164398 YP_001229510.1 CDS Gura_0727 NC_009483.1 858203 858925 R PFAM: transport-associated protein; transport-associated protein complement(858203..858925) Geobacter uraniireducens Rf4 5165560 YP_001229511.1 CDS Gura_0728 NC_009483.1 859087 859524 R hypothetical protein complement(859087..859524) Geobacter uraniireducens Rf4 5165561 YP_001229512.1 CDS Gura_0729 NC_009483.1 859903 860271 R hypothetical protein complement(859903..860271) Geobacter uraniireducens Rf4 5165537 YP_001229513.1 CDS Gura_0730 NC_009483.1 860252 861556 R PFAM: aminotransferase, class I and II; aminotransferase complement(860252..861556) Geobacter uraniireducens Rf4 5165538 YP_001229514.1 CDS Gura_0731 NC_009483.1 861787 862401 R hypothetical protein complement(861787..862401) Geobacter uraniireducens Rf4 5165539 YP_001229515.1 CDS Gura_0732 NC_009483.1 862408 862872 R hypothetical protein complement(862408..862872) Geobacter uraniireducens Rf4 5166772 YP_001229516.1 CDS Gura_0733 NC_009483.1 863006 863359 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(863006..863359) Geobacter uraniireducens Rf4 5166773 YP_001229517.1 CDS Gura_0734 NC_009483.1 863526 865151 D acetyl-CoA acetyltransferase-like protein 863526..865151 Geobacter uraniireducens Rf4 5166774 YP_001229518.1 CDS Gura_0735 NC_009483.1 865175 865468 D transcriptional regulator 865175..865468 Geobacter uraniireducens Rf4 5166364 YP_001229519.1 CDS Gura_0736 NC_009483.1 865782 867020 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase 865782..867020 Geobacter uraniireducens Rf4 5166365 YP_001229520.1 CDS Gura_0737 NC_009483.1 867229 869163 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; integral membrane sensor signal transduction histidine kinase 867229..869163 Geobacter uraniireducens Rf4 5166366 YP_001229521.1 CDS Gura_0738 NC_009483.1 869278 869961 D PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; response regulator receiver protein 869278..869961 Geobacter uraniireducens Rf4 5162810 YP_001229522.1 CDS Gura_0739 NC_009483.1 870137 871747 D PFAM: Cna B domain protein; Cna B domain-containing protein 870137..871747 Geobacter uraniireducens Rf4 5162811 YP_001229523.1 CDS Gura_0740 NC_009483.1 871760 872989 D PFAM: Fibronectin, type III domain protein; protein of unknown function DUF1566; fibronectin I domain-containing protein 871760..872989 Geobacter uraniireducens Rf4 5162812 YP_001229524.1 CDS Gura_0741 NC_009483.1 873179 874192 D PFAM: protein of unknown function DUF1566; hypothetical protein 873179..874192 Geobacter uraniireducens Rf4 5166387 YP_001229525.1 CDS Gura_0742 NC_009483.1 874212 875030 D hypothetical protein 874212..875030 Geobacter uraniireducens Rf4 5166388 YP_001229526.1 CDS Gura_0744 NC_009483.1 875426 877408 D PFAM: ATP-binding region, ATPase domain protein; Diverse 7TM receptor, transmembrane region; histidine kinase, dimerisation and phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 875426..877408 Geobacter uraniireducens Rf4 5163596 YP_001229527.1 CDS Gura_0745 NC_009483.1 877398 878036 D PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator 877398..878036 Geobacter uraniireducens Rf4 5163597 YP_001229528.1 CDS Gura_0746 NC_009483.1 878110 879300 R hypothetical protein complement(878110..879300) Geobacter uraniireducens Rf4 5163598 YP_001229529.1 CDS Gura_0747 NC_009483.1 879664 883389 D hypothetical protein 879664..883389 Geobacter uraniireducens Rf4 5164847 YP_001229530.1 CDS Gura_0748 NC_009483.1 883430 884575 D hypothetical protein 883430..884575 Geobacter uraniireducens Rf4 5164848 YP_001229531.1 CDS Gura_0749 NC_009483.1 885248 886015 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 885248..886015 Geobacter uraniireducens Rf4 5164849 YP_001229532.1 CDS Gura_0750 NC_009483.1 886201 886710 D hypothetical protein 886201..886710 Geobacter uraniireducens Rf4 5164399 YP_001229533.1 CDS Gura_0751 NC_009483.1 886711 887031 D hypothetical protein 886711..887031 Geobacter uraniireducens Rf4 5164400 YP_001229534.1 CDS Gura_0752 NC_009483.1 887226 888086 D hypothetical protein 887226..888086 Geobacter uraniireducens Rf4 5164401 YP_001229535.1 CDS Gura_0753 NC_009483.1 888209 888457 D PFAM: phage Tail Collar domain protein; phage tail collar domain-containing protein 888209..888457 Geobacter uraniireducens Rf4 5165476 YP_001229536.1 CDS Gura_0754 NC_009483.1 888512 888754 D PFAM: phage Tail Collar domain protein; phage tail collar domain-containing protein 888512..888754 Geobacter uraniireducens Rf4 5165477 YP_001229537.1 CDS Gura_0755 NC_009483.1 888800 889834 D PFAM: coagulation factor 5/8 type domain protein; coagulation factor 5/8 type domain-containing protein 888800..889834 Geobacter uraniireducens Rf4 5165478 YP_001229538.1 CDS Gura_0756 NC_009483.1 890030 896158 D TIGRFAM: polymorphic outer membrane protein; PFAM: cell surface receptor IPT/TIG domain protein; Polymorphic membrane protein, Chlamydia; Fibronectin, type III domain protein; polymorphic outer membrane protein 890030..896158 Geobacter uraniireducens Rf4 5164362 YP_001229539.1 CDS Gura_0757 NC_009483.1 896200 897360 D hypothetical protein 896200..897360 Geobacter uraniireducens Rf4 5164363 YP_001229540.1 CDS Gura_0758 NC_009483.1 897780 898301 D hypothetical protein 897780..898301 Geobacter uraniireducens Rf4 5164364 YP_001229541.1 CDS Gura_0759 NC_009483.1 898593 899246 D PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator 898593..899246 Geobacter uraniireducens Rf4 5163099 YP_001229542.1 CDS Gura_0760 NC_009483.1 899254 901086 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase, dimerisation and phosphoacceptor region; integral membrane sensor signal transduction histidine kinase 899254..901086 Geobacter uraniireducens Rf4 5163100 YP_001229543.1 CDS Gura_0761 NC_009483.1 901363 904938 D PFAM: pentapeptide repeat protein; glycosyl hydrolase, BNR repeat-containing protein; pentapeptide repeat-containing protein 901363..904938 Geobacter uraniireducens Rf4 5163101 YP_001229544.1 CDS Gura_0762 NC_009483.1 905116 909435 D hypothetical protein 905116..909435 Geobacter uraniireducens Rf4 5166537 YP_001229545.1 CDS Gura_0763 NC_009483.1 909556 910068 D hypothetical protein 909556..910068 Geobacter uraniireducens Rf4 5166538 YP_001229546.1 CDS Gura_0765 NC_009483.1 910216 910641 D hypothetical protein 910216..910641 Geobacter uraniireducens Rf4 5162976 YP_001229547.1 CDS Gura_0766 NC_009483.1 910785 913787 D PFAM: Tetratricopeptide TPR_4; hypothetical protein 910785..913787 Geobacter uraniireducens Rf4 5162977 YP_001229548.1 CDS Gura_0767 NC_009483.1 913903 919317 D hypothetical protein 913903..919317 Geobacter uraniireducens Rf4 5162978 YP_001229549.1 CDS Gura_0768 NC_009483.1 919473 920630 D hypothetical protein 919473..920630 Geobacter uraniireducens Rf4 5165130 YP_001229550.1 CDS Gura_0769 NC_009483.1 920868 921083 D hypothetical protein 920868..921083 Geobacter uraniireducens Rf4 5165131 YP_001229551.1 CDS Gura_0770 NC_009483.1 921146 921601 D hypothetical protein 921146..921601 Geobacter uraniireducens Rf4 5165132 YP_001229552.1 CDS Gura_0771 NC_009483.1 921604 922161 D PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin HHE cation binding domain-containing protein 921604..922161 Geobacter uraniireducens Rf4 5163114 YP_001229553.1 CDS Gura_0772 NC_009483.1 922158 922577 R Inhibits transcription at high concentrations of nickel; nickel responsive regulator complement(922158..922577) Geobacter uraniireducens Rf4 5163115 YP_001229554.1 CDS Gura_0773 NC_009483.1 922840 923595 R TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; TonB family protein complement(922840..923595) Geobacter uraniireducens Rf4 5163116 YP_001229555.1 CDS Gura_0774 NC_009483.1 923612 927583 R PFAM: CobN/magnesium chelatase; cobaltochelatase complement(923612..927583) Geobacter uraniireducens Rf4 5164800 YP_001229556.1 CDS Gura_0775 NC_009483.1 927570 927908 R hypothetical protein complement(927570..927908) Geobacter uraniireducens Rf4 5164801 YP_001229557.1 CDS Gura_0776 NC_009483.1 927895 928491 R biopolymer transport protein-like protein complement(927895..928491) Geobacter uraniireducens Rf4 5164802 YP_001229558.1 CDS Gura_0777 NC_009483.1 928488 929183 R hypothetical protein complement(928488..929183) Geobacter uraniireducens Rf4 5163727 YP_001229559.1 CDS Gura_0778 NC_009483.1 929197 931425 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor complement(929197..931425) Geobacter uraniireducens Rf4 5163728 YP_001229560.1 CDS Gura_0779 NC_009483.1 932031 933434 R PFAM: Carbohydrate-selective porin OprB; carbohydrate-selective porin OprB complement(932031..933434) Geobacter uraniireducens Rf4 5166590 YP_001229561.1 CDS Gura_0780 NC_009483.1 933508 934554 R PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; cobalamin (vitamin B12) biosynthesis CbiM protein complement(933508..934554) Geobacter uraniireducens Rf4 5163570 YP_001229562.1 CDS Gura_0781 NC_009483.1 934808 935989 D PFAM: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 934808..935989 Geobacter uraniireducens Rf4 5163571 YP_001229563.1 CDS Gura_0782 NC_009483.1 936065 936490 R PFAM: thioesterase superfamily protein; thioesterase superfamily protein complement(936065..936490) Geobacter uraniireducens Rf4 5163572 YP_001229564.1 CDS Gura_0783 NC_009483.1 936621 937232 R hypothetical protein complement(936621..937232) Geobacter uraniireducens Rf4 5165277 YP_001229565.1 CDS Gura_0784 NC_009483.1 937489 938325 R PFAM: helix-turn-helix- domain containing protein, AraC type; helix-turn-helix domain-containing protein complement(937489..938325) Geobacter uraniireducens Rf4 5165278 YP_001229566.1 CDS Gura_0785 NC_009483.1 938440 939243 D PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 938440..939243 Geobacter uraniireducens Rf4 5165279 YP_001229567.1 CDS Gura_0786 NC_009483.1 939563 939874 D PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 939563..939874 Geobacter uraniireducens Rf4 5164080 YP_001229568.1 CDS Gura_0787 NC_009483.1 940066 940314 R PFAM: CopG domain protein DNA-binding domain protein; CopG/DNA-binding domain-containing protein complement(940066..940314) Geobacter uraniireducens Rf4 5164081 YP_001229569.1 CDS Gura_0788 NC_009483.1 940304 940570 R PFAM: protein of unknown function DUF497; hypothetical protein complement(940304..940570) Geobacter uraniireducens Rf4 5164082 YP_001229570.1 CDS Gura_0789 NC_009483.1 940606 941844 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(940606..941844) Geobacter uraniireducens Rf4 5165297 YP_001229571.1 CDS Gura_0790 NC_009483.1 942134 943216 R TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; ribosome small subunit-dependent GTPase A complement(942134..943216) Geobacter uraniireducens Rf4 5165298 YP_001229572.1 CDS Gura_0791 NC_009483.1 943324 943935 R hypothetical protein complement(943324..943935) Geobacter uraniireducens Rf4 5165299 YP_001229573.1 CDS Gura_0792 NC_009483.1 944024 945457 R hypothetical protein complement(944024..945457) Geobacter uraniireducens Rf4 5166884 YP_001229574.1 CDS Gura_0793 NC_009483.1 945580 946524 R PFAM: protein of unknown function DUF1568; SMART: Chromosomal replication initiator, DnaA C-terminal domain; hypothetical protein complement(945580..946524) Geobacter uraniireducens Rf4 5166885 YP_001229575.1 CDS Gura_0794 NC_009483.1 946894 948234 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(946894..948234) Geobacter uraniireducens Rf4 5166886 YP_001229576.1 CDS Gura_0795 NC_009483.1 948299 948646 R hypothetical protein complement(948299..948646) Geobacter uraniireducens Rf4 5166281 YP_001229577.1 CDS Gura_0796 NC_009483.1 948819 949388 R hypothetical protein complement(948819..949388) Geobacter uraniireducens Rf4 5166282 YP_001229578.1 CDS Gura_0797 NC_009483.1 949648 953070 R hypothetical protein complement(949648..953070) Geobacter uraniireducens Rf4 5166283 YP_001229579.1 CDS Gura_0798 NC_009483.1 953535 954458 R hypothetical protein complement(953535..954458) Geobacter uraniireducens Rf4 5164106 YP_001229580.1 CDS Gura_0799 NC_009483.1 954500 954913 R hypothetical protein complement(954500..954913) Geobacter uraniireducens Rf4 5164107 YP_001229581.1 CDS Gura_0800 NC_009483.1 955097 956020 R hypothetical protein complement(955097..956020) Geobacter uraniireducens Rf4 5164108 YP_001229582.1 CDS Gura_0801 NC_009483.1 956500 958296 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein complement(956500..958296) Geobacter uraniireducens Rf4 5166278 YP_001229583.1 CDS Gura_0802 NC_009483.1 958639 959070 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(958639..959070) Geobacter uraniireducens Rf4 5166279 YP_001229584.1 CDS Gura_0803 NC_009483.1 959083 960162 R PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; NADH dehydrogenase (quinone) complement(959083..960162) Geobacter uraniireducens Rf4 5166280 YP_001229585.1 CDS Gura_0804 NC_009483.1 960167 960577 R hypothetical protein complement(960167..960577) Geobacter uraniireducens Rf4 5165333 YP_001229586.1 CDS Gura_0805 NC_009483.1 960776 962857 R TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycogen debranching protein GlgX complement(960776..962857) Geobacter uraniireducens Rf4 5165334 YP_001229587.1 CDS Gura_0806 NC_009483.1 962876 964525 R PFAM: MscS Mechanosensitive ion channel; mechanosensitive ion channel MscS complement(962876..964525) Geobacter uraniireducens Rf4 5165335 YP_001229588.1 CDS Gura_0807 NC_009483.1 965384 965773 R hypothetical protein complement(965384..965773) Geobacter uraniireducens Rf4 5163532 YP_001229589.1 CDS Gura_0808 NC_009483.1 965807 966496 R PFAM: Paraquat-inducible protein A; paraquat-inducible protein A complement(965807..966496) Geobacter uraniireducens Rf4 5163533 YP_001229590.1 CDS Gura_0809 NC_009483.1 966559 967320 R hypothetical protein complement(966559..967320) Geobacter uraniireducens Rf4 5163534 YP_001229591.1 CDS Gura_0810 NC_009483.1 967380 967538 R hypothetical protein complement(967380..967538) Geobacter uraniireducens Rf4 5162643 YP_001229592.1 CDS Gura_0811 NC_009483.1 967677 967991 R hypothetical protein complement(967677..967991) Geobacter uraniireducens Rf4 5162644 YP_001229593.1 CDS Gura_0812 NC_009483.1 968096 968902 R PFAM: Carbohydrate-selective porin OprB; carbohydrate-selective porin OprB complement(968096..968902) Geobacter uraniireducens Rf4 5162645 YP_001229594.1 CDS Gura_0813 NC_009483.1 968925 969446 R hypothetical protein complement(968925..969446) Geobacter uraniireducens Rf4 5162658 YP_001229595.1 CDS Gura_0814 NC_009483.1 970010 971392 R PFAM: outer membrane efflux protein; outer membrane efflux protein complement(970010..971392) Geobacter uraniireducens Rf4 5162659 YP_001229596.1 CDS Gura_0815 NC_009483.1 971497 974607 R PFAM: acriflavin resistance protein; acriflavin resistance protein complement(971497..974607) Geobacter uraniireducens Rf4 5162660 YP_001229597.1 CDS Gura_0816 NC_009483.1 974706 975863 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(974706..975863) Geobacter uraniireducens Rf4 5163448 YP_001229598.1 CDS Gura_0817 NC_009483.1 975874 976512 R PFAM: regulatory protein, TetR; TetR family transcriptional regulator complement(975874..976512) Geobacter uraniireducens Rf4 5163449 YP_001229599.1 CDS Gura_0818 NC_009483.1 976684 977199 D TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 976684..977199 Geobacter uraniireducens Rf4 5163450 YP_001229600.1 CDS Gura_0819 NC_009483.1 977199 978140 D TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; methionyl-tRNA formyltransferase 977199..978140 Geobacter uraniireducens Rf4 5163750 YP_001229601.1 CDS Gura_0820 NC_009483.1 978143 978913 D PFAM: protein of unknown function DUF116; hypothetical protein 978143..978913 Geobacter uraniireducens Rf4 5163751 YP_001229602.1 CDS Gura_0821 NC_009483.1 978941 979951 D PFAM: polysaccharide deacetylase; polysaccharide deacetylase 978941..979951 Geobacter uraniireducens Rf4 5163752 YP_001229603.1 CDS Gura_0822 NC_009483.1 979989 980912 D TIGRFAM: cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; cysteine synthase 979989..980912 Geobacter uraniireducens Rf4 5164494 YP_001229604.1 CDS Gura_0823 NC_009483.1 980947 981279 D hypothetical protein 980947..981279 Geobacter uraniireducens Rf4 5164495 YP_001229605.1 CDS Gura_0824 NC_009483.1 981288 982211 D hypothetical protein 981288..982211 Geobacter uraniireducens Rf4 5165050 YP_001229606.1 CDS Gura_0825 NC_009483.1 982488 983102 D hypothetical protein 982488..983102 Geobacter uraniireducens Rf4 5165051 YP_001229607.1 CDS Gura_0826 NC_009483.1 983284 985848 D TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; SMART: DEAD-like helicases-like; CRISPR-associated helicase Cas3 983284..985848 Geobacter uraniireducens Rf4 5165052 YP_001229608.1 CDS Gura_0827 NC_009483.1 985845 987482 D TIGRFAM: CRISPR-associated protein, Cse1 family; CRISPR-associated Cse1 family protein 985845..987482 Geobacter uraniireducens Rf4 5165220 YP_001229609.1 CDS Gura_0828 NC_009483.1 987479 987970 D hypothetical protein 987479..987970 Geobacter uraniireducens Rf4 5165221 YP_001229610.1 CDS Gura_0829 NC_009483.1 987967 988656 D TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR-associated protein, CT1974; CRISPR-associated Cse3 family protein 987967..988656 Geobacter uraniireducens Rf4 5165222 YP_001229611.1 CDS Gura_0830 NC_009483.1 988690 989916 D TIGRFAM: CRISPR-associated protein, Cse4 family; CRISPR-associated Cse4 family protein 988690..989916 Geobacter uraniireducens Rf4 5165905 YP_001229612.1 CDS Gura_0831 NC_009483.1 989891 990586 D TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; CRISPR-associated Cas5 family protein 989891..990586 Geobacter uraniireducens Rf4 5165906 YP_001229613.1 CDS Gura_0832 NC_009483.1 990752 991093 R PFAM: PemK family protein; transcriptional modulator of MazE/toxin MazF complement(990752..991093) Geobacter uraniireducens Rf4 5165907 YP_001229614.1 CDS Gura_0833 NC_009483.1 991093 991410 R PFAM: CopG domain protein DNA-binding domain protein; CopG/DNA-binding domain-containing protein complement(991093..991410) Geobacter uraniireducens Rf4 5166019 YP_001229615.1 CDS Gura_0834 NC_009483.1 991566 991934 D PFAM: S23 ribosomal protein; S23 ribosomal protein 991566..991934 Geobacter uraniireducens Rf4 5166020 YP_001229616.1 CDS Gura_0835 NC_009483.1 992075 992998 D TIGRFAM: CRISPR-associated protein Cas1; CRISPR-associated Cas1 family protein 992075..992998 Geobacter uraniireducens Rf4 5166021 YP_001229617.1 CDS Gura_0836 NC_009483.1 993182 994564 D PFAM: transposase, IS4 family protein; transposase, IS4 family protein 993182..994564 Geobacter uraniireducens Rf4 5166191 YP_001229618.1 CDS Gura_0837 NC_009483.1 994670 994978 D TIGRFAM: CRISPR-associated protein Cas2; hypothetical protein 994670..994978 Geobacter uraniireducens Rf4 5166192 YP_001229619.1 CDS Gura_0838 NC_009483.1 996868 997323 D hypothetical protein 996868..997323 Geobacter uraniireducens Rf4 5166193 YP_001229620.1 CDS Gura_0839 NC_009483.1 997355 998152 R hypothetical protein complement(997355..998152) Geobacter uraniireducens Rf4 5167046 YP_001229621.1 CDS Gura_0840 NC_009483.1 998290 999699 R TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; mercuric reductase complement(998290..999699) Geobacter uraniireducens Rf4 5167047 YP_001229622.1 CDS Gura_0841 NC_009483.1 1000165 1002204 D TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; transketolase 1000165..1002204 Geobacter uraniireducens Rf4 5164502 YP_001229623.1 CDS Gura_0842 NC_009483.1 1002266 1002673 R PFAM: protein of unknown function UPF0150; HicB family protein; hypothetical protein complement(1002266..1002673) Geobacter uraniireducens Rf4 5164503 YP_001229624.1 CDS Gura_0843 NC_009483.1 1002670 1002924 R hypothetical protein complement(1002670..1002924) Geobacter uraniireducens Rf4 5164504 YP_001229625.1 CDS Gura_0845 NC_009483.1 1003482 1004486 R PFAM: protein of unknown function DUF1568; SMART: Chromosomal replication initiator, DnaA C-terminal domain; hypothetical protein complement(1003482..1004486) Geobacter uraniireducens Rf4 5164131 YP_001229626.1 CDS Gura_0846 NC_009483.1 1004530 1005213 R retron-type reverse transcriptase-like protein complement(1004530..1005213) Geobacter uraniireducens Rf4 5164132 YP_001229627.1 CDS Gura_0847 NC_009483.1 1005974 1006744 R hypothetical protein complement(1005974..1006744) Geobacter uraniireducens Rf4 5165494 YP_001229628.1 CDS Gura_0848 NC_009483.1 1006967 1007452 R PFAM: 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase complement(1006967..1007452) Geobacter uraniireducens Rf4 5165495 YP_001229629.1 CDS Gura_0849 NC_009483.1 1007828 1008919 R PFAM: putative transposase; putative transposase complement(1007828..1008919) Geobacter uraniireducens Rf4 5165496 YP_001229630.1 CDS Gura_0851 NC_009483.1 1009478 1010167 D PFAM: cyclic nucleotide-binding; regulatory protein, Crp; CRP/FNR family transcriptional regulator 1009478..1010167 Geobacter uraniireducens Rf4 5165266 YP_001229631.1 CDS Gura_0852 NC_009483.1 1010139 1010699 R PFAM: protein of unknown function DUF523; hypothetical protein complement(1010139..1010699) Geobacter uraniireducens Rf4 5165267 YP_001229632.1 CDS Gura_0853 NC_009483.1 1010978 1012609 D PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; GAF sensor signal transduction histidine kinase 1010978..1012609 Geobacter uraniireducens Rf4 5163669 YP_001229633.1 CDS Gura_0854 NC_009483.1 1012602 1012976 D PFAM: response regulator receiver; response regulator receiver protein 1012602..1012976 Geobacter uraniireducens Rf4 5163670 YP_001229634.1 CDS Gura_0855 NC_009483.1 1013079 1015586 D PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; nucleotidyl transferase 1013079..1015586 Geobacter uraniireducens Rf4 5163671 YP_001229635.1 CDS Gura_0856 NC_009483.1 1015687 1017885 D PFAM: glycoside hydrolase, family 57; glycoside hydrolase family protein 1015687..1017885 Geobacter uraniireducens Rf4 5166097 YP_001229636.1 CDS Gura_0857 NC_009483.1 1018084 1019109 D TIGRFAM: galactose-1-phosphate uridylyltransferase; galactose-1-phosphate uridylyltransferase 1018084..1019109 Geobacter uraniireducens Rf4 5166098 YP_001229637.1 CDS Gura_0858 NC_009483.1 1019133 1020587 D TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: glycosyl transferase, group 1; Starch synthase catalytic domain protein; glycogen/starch synthase 1019133..1020587 Geobacter uraniireducens Rf4 5166099 YP_001229638.1 CDS Gura_0859 NC_009483.1 1020594 1020743 D hypothetical protein 1020594..1020743 Geobacter uraniireducens Rf4 5163744 YP_001229639.1 CDS Gura_0860 NC_009483.1 1020799 1021053 D hypothetical protein 1020799..1021053 Geobacter uraniireducens Rf4 5163745 YP_001229640.1 CDS Gura_0861 NC_009483.1 1021153 1022676 R hypothetical protein complement(1021153..1022676) Geobacter uraniireducens Rf4 5163746 YP_001229641.1 CDS Gura_0862 NC_009483.1 1022940 1023413 D hypothetical protein 1022940..1023413 Geobacter uraniireducens Rf4 5163338 YP_001229642.1 CDS Gura_0863 NC_009483.1 1023410 1024195 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1023410..1024195 Geobacter uraniireducens Rf4 5163339 YP_001229643.1 CDS Gura_0864 NC_009483.1 1024198 1025445 D PFAM: Polysulphide reductase, NrfD; polysulfide reductase NrfD 1024198..1025445 Geobacter uraniireducens Rf4 5163340 YP_001229644.1 CDS Gura_0865 NC_009483.1 1025591 1027432 D hypothetical protein 1025591..1027432 Geobacter uraniireducens Rf4 5163961 YP_001229645.1 CDS Gura_0866 NC_009483.1 1027662 1028735 D PFAM: aminotransferase, class V; alanine--glyoxylate transaminase 1027662..1028735 Geobacter uraniireducens Rf4 5163962 YP_001229646.1 CDS Gura_0867 NC_009483.1 1028784 1029512 D hypothetical protein 1028784..1029512 Geobacter uraniireducens Rf4 5163963 YP_001229647.1 CDS Gura_0868 NC_009483.1 1029664 1029840 D hypothetical protein 1029664..1029840 Geobacter uraniireducens Rf4 5165461 YP_001229648.1 CDS Gura_0869 NC_009483.1 1029909 1030067 R PFAM: Rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein complement(1029909..1030067) Geobacter uraniireducens Rf4 5165462 YP_001229649.1 CDS Gura_0870 NC_009483.1 1030628 1032481 D catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 1030628..1032481 Geobacter uraniireducens Rf4 5165463 YP_001229650.1 CDS Gura_0871 NC_009483.1 1032647 1034239 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 1032647..1034239 Geobacter uraniireducens Rf4 5165867 YP_001229651.1 CDS Gura_0872 NC_009483.1 1034453 1035586 D TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein; hydrogenase (NiFe) small subunit HydA 1034453..1035586 Geobacter uraniireducens Rf4 5165868 YP_001229652.1 CDS Gura_0873 NC_009483.1 1035587 1037296 D PFAM: nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase, large subunit 1035587..1037296 Geobacter uraniireducens Rf4 5163165 YP_001229653.1 CDS Gura_0874 NC_009483.1 1037307 1037975 D TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; Ni/Fe-hydrogenase, b-type cytochrome subunit 1037307..1037975 Geobacter uraniireducens Rf4 5163166 YP_001229654.1 CDS Gura_0875 NC_009483.1 1038130 1040016 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(1038130..1040016) Geobacter uraniireducens Rf4 5163167 YP_001229655.1 CDS Gura_0876 NC_009483.1 1040188 1042317 R TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) complement(1040188..1042317) Geobacter uraniireducens Rf4 5162742 YP_001229656.1 CDS Gura_0877 NC_009483.1 1042626 1042817 D hypothetical protein 1042626..1042817 Geobacter uraniireducens Rf4 5162743 YP_001229657.1 CDS Gura_0878 NC_009483.1 1042847 1043437 R PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; cupin complement(1042847..1043437) Geobacter uraniireducens Rf4 5162744 YP_001229658.1 CDS Gura_0879 NC_009483.1 1043702 1045132 D TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 1043702..1045132 Geobacter uraniireducens Rf4 5162652 YP_001229659.1 CDS Gura_0880 NC_009483.1 1045190 1045453 D hypothetical protein 1045190..1045453 Geobacter uraniireducens Rf4 5162653 YP_001229660.1 CDS Gura_0881 NC_009483.1 1045534 1046496 D TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 1045534..1046496 Geobacter uraniireducens Rf4 5162654 YP_001229661.1 CDS Gura_0882 NC_009483.1 1046578 1047381 D PFAM: protein of unknown function DUF152; hypothetical protein 1046578..1047381 Geobacter uraniireducens Rf4 5166182 YP_001229662.1 CDS Gura_0883 NC_009483.1 1047523 1048377 D hypothetical protein 1047523..1048377 Geobacter uraniireducens Rf4 5166183 YP_001229663.1 CDS Gura_0884 NC_009483.1 1048466 1048798 R hypothetical protein complement(1048466..1048798) Geobacter uraniireducens Rf4 5166184 YP_001229664.1 CDS Gura_0885 NC_009483.1 1049041 1050132 D hypothetical protein 1049041..1050132 Geobacter uraniireducens Rf4 5162900 YP_001229665.1 CDS Gura_0886 NC_009483.1 1050143 1050934 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase, 20 kDa subunit complement(1050143..1050934) Geobacter uraniireducens Rf4 5162901 YP_001229666.1 CDS Gura_0887 NC_009483.1 1051096 1052382 D transposase 1051096..1052382 Geobacter uraniireducens Rf4 5162902 YP_001229667.1 CDS Gura_0888 NC_009483.1 1052589 1054112 R PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; NADH dehydrogenase (ubiquinone), 30 kDa subunit; NADH-ubiquinone oxidoreductase subunit 49kDa complement(1052589..1054112) Geobacter uraniireducens Rf4 5163102 YP_001229668.1 CDS Gura_0889 NC_009483.1 1054109 1055542 R PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase (quinone) complement(1054109..1055542) Geobacter uraniireducens Rf4 5163103 YP_001229669.1 CDS Gura_0890 NC_009483.1 1055547 1056191 R hydrogenase 4 membrane component (E)-like protein complement(1055547..1056191) Geobacter uraniireducens Rf4 5163104 YP_001229670.1 CDS Gura_0891 NC_009483.1 1056188 1057096 R formate hydrogenlyase subunit 4-like protein complement(1056188..1057096) Geobacter uraniireducens Rf4 5165763 YP_001229671.1 CDS Gura_0892 NC_009483.1 1057148 1059157 R PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase (quinone) complement(1057148..1059157) Geobacter uraniireducens Rf4 5165764 YP_001229672.1 CDS Gura_0893 NC_009483.1 1059194 1059886 R TIGRFAM: DNA binding domain, excisionase family; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; putative PTS IIA-like nitrogen-regulatory protein PtsN complement(1059194..1059886) Geobacter uraniireducens Rf4 5165765 YP_001229673.1 CDS Gura_0894 NC_009483.1 1060257 1060931 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1060257..1060931) Geobacter uraniireducens Rf4 5164178 YP_001229674.1 CDS Gura_0895 NC_009483.1 1060924 1062087 R PFAM: protein of unknown function DUF214; hypothetical protein complement(1060924..1062087) Geobacter uraniireducens Rf4 5164179 YP_001229675.1 CDS Gura_0896 NC_009483.1 1062088 1062474 R hypothetical protein complement(1062088..1062474) Geobacter uraniireducens Rf4 5164180 YP_001229676.1 CDS Gura_0897 NC_009483.1 1062762 1063091 R hypothetical protein complement(1062762..1063091) Geobacter uraniireducens Rf4 5163117 YP_001229677.1 CDS Gura_0898 NC_009483.1 1063406 1063630 D PFAM: CopG domain protein DNA-binding domain protein; CopG/DNA-binding domain-containing protein 1063406..1063630 Geobacter uraniireducens Rf4 5163118 YP_001229678.1 CDS Gura_0899 NC_009483.1 1063664 1064437 D PFAM: Integral membrane protein TerC; integral membrane protein TerC 1063664..1064437 Geobacter uraniireducens Rf4 5163119 YP_001229679.1 CDS Gura_0900 NC_009483.1 1064455 1064769 D hypothetical protein 1064455..1064769 Geobacter uraniireducens Rf4 5163304 YP_001229680.1 CDS Gura_0901 NC_009483.1 1064794 1065738 D PFAM: import inner membrane translocase, subunit Tim44; import inner membrane translocase subunit Tim44 1064794..1065738 Geobacter uraniireducens Rf4 5163305 YP_001229681.1 CDS Gura_0902 NC_009483.1 1066037 1068715 D PFAM: protein of unknown function UPF0182; hypothetical protein 1066037..1068715 Geobacter uraniireducens Rf4 5163306 YP_001229682.1 CDS Gura_0903 NC_009483.1 1069020 1069274 R hypothetical protein complement(1069020..1069274) Geobacter uraniireducens Rf4 5162840 YP_001229683.1 CDS Gura_0904 NC_009483.1 1069357 1069836 R hypothetical protein complement(1069357..1069836) Geobacter uraniireducens Rf4 5162841 YP_001229684.1 CDS Gura_0905 NC_009483.1 1069905 1071545 R TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; small GTP-binding protein complement(1069905..1071545) Geobacter uraniireducens Rf4 5162842 YP_001229685.1 CDS Gura_0906 NC_009483.1 1071704 1072474 R PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1071704..1072474) Geobacter uraniireducens Rf4 5166569 YP_001229686.1 CDS Gura_0907 NC_009483.1 1072639 1074285 D PFAM: GAF domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 1072639..1074285 Geobacter uraniireducens Rf4 5166570 YP_001229687.1 CDS Gura_0908 NC_009483.1 1074328 1074594 R hypothetical protein complement(1074328..1074594) Geobacter uraniireducens Rf4 5166571 YP_001229688.1 CDS Gura_0909 NC_009483.1 1074607 1074852 R hypothetical protein complement(1074607..1074852) Geobacter uraniireducens Rf4 5162751 YP_001229689.1 CDS Gura_0910 NC_009483.1 1075120 1075542 D hypothetical protein 1075120..1075542 Geobacter uraniireducens Rf4 5162752 YP_001229690.1 CDS Gura_0911 NC_009483.1 1075570 1075965 R PFAM: response regulator receiver; response regulator receiver protein complement(1075570..1075965) Geobacter uraniireducens Rf4 5162753 YP_001229691.1 CDS Gura_0912 NC_009483.1 1076179 1076661 D TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; ybaK/ebsC protein 1076179..1076661 Geobacter uraniireducens Rf4 5165712 YP_001229692.1 CDS Gura_0913 NC_009483.1 1076750 1077574 D PFAM: Silent information regulator protein Sir2; silent information regulator protein Sir2 1076750..1077574 Geobacter uraniireducens Rf4 5165713 YP_001229693.1 CDS Gura_0914 NC_009483.1 1077609 1078652 D TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; dihydroorotate dehydrogenase; nifR3 family TIM-barrel protein 1077609..1078652 Geobacter uraniireducens Rf4 5165714 YP_001229694.1 CDS Gura_0915 NC_009483.1 1078642 1079730 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; nitrogen-specific signal transduction histidine kinase NtrB 1078642..1079730 Geobacter uraniireducens Rf4 5165964 YP_001229695.1 CDS Gura_0916 NC_009483.1 1079840 1081282 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 1079840..1081282 Geobacter uraniireducens Rf4 5165965 YP_001229696.1 CDS Gura_0917 NC_009483.1 1081546 1082109 D PFAM: isochorismatase hydrolase; isochorismatase hydrolase 1081546..1082109 Geobacter uraniireducens Rf4 5165966 YP_001229697.1 CDS Gura_0918 NC_009483.1 1082450 1083391 D PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator 1082450..1083391 Geobacter uraniireducens Rf4 5165838 YP_001229698.1 CDS Gura_0919 NC_009483.1 1083486 1086557 R PFAM: PKD domain containing protein; PKD domain-containing protein complement(1083486..1086557) Geobacter uraniireducens Rf4 5165839 YP_001229699.1 CDS Gura_0920 NC_009483.1 1086576 1086983 R hypothetical protein complement(1086576..1086983) Geobacter uraniireducens Rf4 5165840 YP_001229700.1 CDS Gura_0921 NC_009483.1 1087566 1091048 R hypothetical protein complement(1087566..1091048) Geobacter uraniireducens Rf4 5166710 YP_001229701.1 CDS Gura_0922 NC_009483.1 1091079 1091543 R hypothetical protein complement(1091079..1091543) Geobacter uraniireducens Rf4 5166711 YP_001229702.1 CDS Gura_0923 NC_009483.1 1091905 1093044 R PFAM: NHL repeat containing protein; NHL repeat-containing protein complement(1091905..1093044) Geobacter uraniireducens Rf4 5166643 YP_001229703.1 CDS Gura_0924 NC_009483.1 1093175 1093966 R hypothetical protein complement(1093175..1093966) Geobacter uraniireducens Rf4 5166644 YP_001229704.1 CDS Gura_0925 NC_009483.1 1094386 1095888 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator complement(1094386..1095888) Geobacter uraniireducens Rf4 5166645 YP_001229705.1 CDS Gura_0926 NC_009483.1 1096542 1097243 R PFAM: response regulator receiver; type IV pilus assembly PilZ; response regulator receiver modulated PilZ sensor protein complement(1096542..1097243) Geobacter uraniireducens Rf4 5166176 YP_001229706.1 CDS Gura_0927 NC_009483.1 1097418 1098716 R hypothetical protein complement(1097418..1098716) Geobacter uraniireducens Rf4 5166177 YP_001229707.1 CDS Gura_0928 NC_009483.1 1098783 1100132 R TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; replicative DNA helicase complement(1098783..1100132) Geobacter uraniireducens Rf4 5166178 YP_001229708.1 CDS Gura_0929 NC_009483.1 1100257 1100991 R TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O, RecO; DNA repair protein RecO complement(1100257..1100991) Geobacter uraniireducens Rf4 5166572 YP_001229709.1 CDS Gura_0930 NC_009483.1 1101316 1102575 D hypothetical protein 1101316..1102575 Geobacter uraniireducens Rf4 5166573 YP_001229710.1 CDS Gura_0931 NC_009483.1 1102813 1103256 R hypothetical protein complement(1102813..1103256) Geobacter uraniireducens Rf4 5166574 YP_001229711.1 CDS Gura_0932 NC_009483.1 1103321 1103812 R PFAM: dihydrofolate reductase region; dihydrofolate reductase complement(1103321..1103812) Geobacter uraniireducens Rf4 5165682 YP_001229712.1 CDS Gura_0933 NC_009483.1 1103841 1105043 R PFAM: amine oxidase; FAD dependent oxidoreductase; amine oxidase complement(1103841..1105043) Geobacter uraniireducens Rf4 5165683 YP_001229713.1 CDS Gura_0934 NC_009483.1 1105391 1106404 D TIGRFAM: cytochrome C family protein; cytochrome C family protein 1105391..1106404 Geobacter uraniireducens Rf4 5165684 YP_001229714.1 CDS Gura_0935 NC_009483.1 1106487 1108844 R TIGRFAM: MutS2 family protein; PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein; MutS2 family protein complement(1106487..1108844) Geobacter uraniireducens Rf4 5165893 YP_001229715.1 CDS Gura_0936 NC_009483.1 1109043 1111448 R hypothetical protein complement(1109043..1111448) Geobacter uraniireducens Rf4 5165894 YP_001229716.1 CDS Gura_0937 NC_009483.1 1111742 1112932 R PFAM: phospholipase D/Transphosphatidylase; phospholipase D/transphosphatidylase complement(1111742..1112932) Geobacter uraniireducens Rf4 5165895 YP_001229717.1 CDS Gura_0938 NC_009483.1 1113069 1113269 R hypothetical protein complement(1113069..1113269) Geobacter uraniireducens Rf4 5164684 YP_001229718.1 CDS Gura_0939 NC_009483.1 1113349 1113570 R PFAM: nitrogen-fixing NifU domain protein; NifU domain-containing protein complement(1113349..1113570) Geobacter uraniireducens Rf4 5164685 YP_001229719.1 CDS aspA NC_009483.1 1113686 1115089 R catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase complement(1113686..1115089) Geobacter uraniireducens Rf4 5164686 YP_001229720.1 CDS Gura_0941 NC_009483.1 1115227 1115688 R PFAM: Rubrerythrin; rubrerythrin complement(1115227..1115688) Geobacter uraniireducens Rf4 5163454 YP_001229721.1 CDS Gura_0942 NC_009483.1 1115685 1116323 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase complement(1115685..1116323) Geobacter uraniireducens Rf4 5163455 YP_001229722.1 CDS Gura_0943 NC_009483.1 1116385 1117542 R PFAM: protein of unknown function DUF185; hypothetical protein complement(1116385..1117542) Geobacter uraniireducens Rf4 5163456 YP_001229723.1 CDS Gura_0944 NC_009483.1 1117836 1118828 R PFAM: Helix-turn-helix, type 11 domain protein; helix-turn-helix, type 11 domain-containing protein complement(1117836..1118828) Geobacter uraniireducens Rf4 5163988 YP_001229724.1 CDS Gura_0945 NC_009483.1 1118831 1120186 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase complement(1118831..1120186) Geobacter uraniireducens Rf4 5163989 YP_001229725.1 CDS Gura_0946 NC_009483.1 1121325 1121732 R PFAM: PilT protein domain protein; PilT domain-containing protein complement(1121325..1121732) Geobacter uraniireducens Rf4 5163990 YP_001229726.1 CDS Gura_0947 NC_009483.1 1121729 1121929 R hypothetical protein complement(1121729..1121929) Geobacter uraniireducens Rf4 5166989 YP_001229727.1 CDS Gura_0948 NC_009483.1 1122412 1122855 D hypothetical protein 1122412..1122855 Geobacter uraniireducens Rf4 5166990 YP_001229728.1 CDS Gura_0949 NC_009483.1 1122879 1123364 D hypothetical protein 1122879..1123364 Geobacter uraniireducens Rf4 5166991 YP_001229729.1 CDS Gura_0950 NC_009483.1 1123525 1124490 D PFAM: protein of unknown function DUF1568; hypothetical protein 1123525..1124490 Geobacter uraniireducens Rf4 5166558 YP_001229730.1 CDS Gura_0951 NC_009483.1 1124728 1128309 D PFAM: peptidase S10, serine carboxypeptidase; Pyridoxal-dependent decarboxylase; peptidase S10, serine carboxypeptidase 1124728..1128309 Geobacter uraniireducens Rf4 5166559 YP_001229731.1 CDS Gura_0952 NC_009483.1 1128636 1128812 R hypothetical protein complement(1128636..1128812) Geobacter uraniireducens Rf4 5166560 YP_001229732.1 CDS Gura_0953 NC_009483.1 1128799 1129035 R hypothetical protein complement(1128799..1129035) Geobacter uraniireducens Rf4 5166232 YP_001229733.1 CDS Gura_0954 NC_009483.1 1129587 1130888 D PFAM: peptidase M23B; peptidase M23B 1129587..1130888 Geobacter uraniireducens Rf4 5166233 YP_001229734.1 CDS Gura_0955 NC_009483.1 1131007 1131630 D TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: putative methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 1131007..1131630 Geobacter uraniireducens Rf4 5166234 YP_001229735.1 CDS Gura_0956 NC_009483.1 1131916 1134876 R PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase complement(1131916..1134876) Geobacter uraniireducens Rf4 5166850 YP_001229736.1 CDS Gura_0957 NC_009483.1 1135014 1135523 R PFAM: CheW domain protein; putative CheW protein complement(1135014..1135523) Geobacter uraniireducens Rf4 5166851 YP_001229737.1 CDS Gura_0958 NC_009483.1 1135831 1136037 R PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein complement(1135831..1136037) Geobacter uraniireducens Rf4 5166852 YP_001229738.1 CDS Gura_0959 NC_009483.1 1136238 1136867 R hypothetical protein complement(1136238..1136867) Geobacter uraniireducens Rf4 5166450 YP_001229739.1 CDS Gura_0960 NC_009483.1 1137271 1139271 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1137271..1139271 Geobacter uraniireducens Rf4 5166451 YP_001229740.1 CDS Gura_0961 NC_009483.1 1139443 1139793 D hypothetical protein 1139443..1139793 Geobacter uraniireducens Rf4 5166452 YP_001229741.1 CDS Gura_0962 NC_009483.1 1139961 1141244 D hypothetical protein 1139961..1141244 Geobacter uraniireducens Rf4 5163579 YP_001229742.1 CDS Gura_0963 NC_009483.1 1141288 1141887 R PFAM: CheD family protein; CheD, stimulates methylation of MCP protein complement(1141288..1141887) Geobacter uraniireducens Rf4 5163580 YP_001229743.1 CDS Gura_0964 NC_009483.1 1142814 1143443 R PFAM: dienelactone hydrolase; dienelactone hydrolase complement(1142814..1143443) Geobacter uraniireducens Rf4 5163581 YP_001229744.1 CDS Gura_0965 NC_009483.1 1143465 1144091 R PFAM: phosphoribosyltransferase; phosphoribosyltransferase complement(1143465..1144091) Geobacter uraniireducens Rf4 5166754 YP_001229745.1 CDS Gura_0966 NC_009483.1 1144550 1147480 R PFAM: peptidase S9B, dipeptidylpeptidase IV domain protein; WD40 domain protein beta Propeller; peptidase S9B dipeptidylpeptidase IV subunit complement(1144550..1147480) Geobacter uraniireducens Rf4 5166755 YP_001229746.1 CDS Gura_0967 NC_009483.1 1147769 1148728 R PFAM: Rhomboid family protein; rhomboid family protein complement(1147769..1148728) Geobacter uraniireducens Rf4 5166756 YP_001229747.1 CDS Gura_0968 NC_009483.1 1148762 1149412 R PFAM: phosphoesterase, PA-phosphatase related; PA-phosphatase-like protein complement(1148762..1149412) Geobacter uraniireducens Rf4 5162894 YP_001229748.1 CDS Gura_0969 NC_009483.1 1149671 1150159 D PFAM: response regulator receiver; response regulator receiver protein 1149671..1150159 Geobacter uraniireducens Rf4 5162895 YP_001229749.1 CDS Gura_0970 NC_009483.1 1150167 1152254 R TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; transketolase complement(1150167..1152254) Geobacter uraniireducens Rf4 5162896 YP_001229750.1 CDS Gura_0971 NC_009483.1 1152744 1153943 D PFAM: tRNA pseudouridine synthase D, TruD; tRNA pseudouridine synthase D 1152744..1153943 Geobacter uraniireducens Rf4 5162933 YP_001229751.1 CDS Gura_0972 NC_009483.1 1154002 1154325 D hypothetical protein 1154002..1154325 Geobacter uraniireducens Rf4 5162934 YP_001229752.1 CDS Gura_0973 NC_009483.1 1154318 1155847 D PFAM: Na+/solute symporter; Na+/solute symporter 1154318..1155847 Geobacter uraniireducens Rf4 5162935 YP_001229753.1 CDS Gura_0974 NC_009483.1 1156003 1157244 D PFAM: protein of unknown function DUF294, nucleotidyltransferase putative; hypothetical protein 1156003..1157244 Geobacter uraniireducens Rf4 5166775 YP_001229754.1 CDS Gura_0975 NC_009483.1 1157253 1158062 D PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 1157253..1158062 Geobacter uraniireducens Rf4 5166776 YP_001229755.1 CDS Gura_0976 NC_009483.1 1158161 1158985 D PFAM: polysaccharide deacetylase; polysaccharide deacetylase 1158161..1158985 Geobacter uraniireducens Rf4 5166777 YP_001229756.1 CDS Gura_0977 NC_009483.1 1159150 1159332 D hypothetical protein 1159150..1159332 Geobacter uraniireducens Rf4 5163028 YP_001229757.1 CDS Gura_0978 NC_009483.1 1159468 1160310 D PFAM: response regulator receiver; General secretory system II, protein E domain protein; response regulator receiver protein 1159468..1160310 Geobacter uraniireducens Rf4 5163029 YP_001229758.1 CDS Gura_0979 NC_009483.1 1160419 1161231 R TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; pyrroline-5-carboxylate reductase complement(1160419..1161231) Geobacter uraniireducens Rf4 5163030 YP_001229759.1 CDS Gura_0980 NC_009483.1 1161676 1162221 D PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; XRE family transcriptional regulator 1161676..1162221 Geobacter uraniireducens Rf4 5163227 YP_001229760.1 CDS Gura_0981 NC_009483.1 1162321 1163517 D PFAM: Saccharopine dehydrogenase; saccharopine dehydrogenase 1162321..1163517 Geobacter uraniireducens Rf4 5163228 YP_001229761.1 CDS Gura_0982 NC_009483.1 1163610 1164764 D TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; carboxynorspermidine decarboxylase 1163610..1164764 Geobacter uraniireducens Rf4 5163229 YP_001229762.1 CDS Gura_0983 NC_009483.1 1164877 1166784 D catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 1164877..1166784 Geobacter uraniireducens Rf4 5163174 YP_001229763.1 CDS Gura_0984 NC_009483.1 1166913 1168127 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 1166913..1168127 Geobacter uraniireducens Rf4 5163175 YP_001229764.1 CDS Gura_0985 NC_009483.1 1168197 1168583 D PFAM: Hpt domain protein; Hpt domain-containing protein 1168197..1168583 Geobacter uraniireducens Rf4 5163176 YP_001229765.1 CDS Gura_0986 NC_009483.1 1169102 1169695 D PFAM: regulatory protein, TetR; TetR family transcriptional regulator 1169102..1169695 Geobacter uraniireducens Rf4 5163150 YP_001229766.1 CDS Gura_0987 NC_009483.1 1169845 1171059 D hypothetical protein 1169845..1171059 Geobacter uraniireducens Rf4 5163151 YP_001229767.1 CDS Gura_0988 NC_009483.1 1171075 1171776 D hypothetical protein 1171075..1171776 Geobacter uraniireducens Rf4 5163152 YP_001229768.1 CDS Gura_0989 NC_009483.1 1171752 1173539 D hypothetical protein 1171752..1173539 Geobacter uraniireducens Rf4 5163221 YP_001229769.1 CDS Gura_0990 NC_009483.1 1173630 1174790 D hypothetical protein 1173630..1174790 Geobacter uraniireducens Rf4 5163222 YP_001229770.1 CDS Gura_0991 NC_009483.1 1175299 1176516 D hypothetical protein 1175299..1176516 Geobacter uraniireducens Rf4 5163223 YP_001229771.1 CDS Gura_0992 NC_009483.1 1176532 1177311 D hypothetical protein 1176532..1177311 Geobacter uraniireducens Rf4 5163593 YP_001229772.1 CDS Gura_0993 NC_009483.1 1177337 1179124 D TIGRFAM: cytochrome C family protein; cytochrome C family protein 1177337..1179124 Geobacter uraniireducens Rf4 5163594 YP_001229773.1 CDS Gura_0994 NC_009483.1 1179201 1180805 D hypothetical protein 1179201..1180805 Geobacter uraniireducens Rf4 5163595 YP_001229774.1 CDS Gura_0995 NC_009483.1 1180946 1181521 D hypothetical protein 1180946..1181521 Geobacter uraniireducens Rf4 5163922 YP_001229775.1 CDS Gura_0996 NC_009483.1 1182540 1182947 D hypothetical protein 1182540..1182947 Geobacter uraniireducens Rf4 5163923 YP_001229776.1 CDS Gura_0997 NC_009483.1 1183241 1184263 D PFAM: molybdopterin binding domain; molybdopterin binding domain-containing protein 1183241..1184263 Geobacter uraniireducens Rf4 5163924 YP_001229777.1 CDS Gura_0998 NC_009483.1 1184516 1187311 D PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 1184516..1187311 Geobacter uraniireducens Rf4 5164049 YP_001229778.1 CDS Gura_0999 NC_009483.1 1187510 1189825 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; 4Fe-4S ferredoxin 1187510..1189825 Geobacter uraniireducens Rf4 5164050 YP_001229779.1 CDS Gura_1000 NC_009483.1 1189822 1190025 D hypothetical protein 1189822..1190025 Geobacter uraniireducens Rf4 5164300 YP_001229780.1 CDS Gura_1001 NC_009483.1 1190106 1190819 D PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 1190106..1190819 Geobacter uraniireducens Rf4 5164301 YP_001229781.1 CDS Gura_1002 NC_009483.1 1190987 1191430 D hypothetical protein 1190987..1191430 Geobacter uraniireducens Rf4 5164302 YP_001229782.1 CDS Gura_1003 NC_009483.1 1191590 1192966 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 1191590..1192966 Geobacter uraniireducens Rf4 5164378 YP_001229783.1 CDS Gura_1004 NC_009483.1 1192957 1194285 D coenzyme F390 synthetase-like protein 1192957..1194285 Geobacter uraniireducens Rf4 5164379 YP_001229784.1 CDS Gura_1005 NC_009483.1 1194279 1195334 D PFAM: protein of unknown function DUF182; hypothetical protein 1194279..1195334 Geobacter uraniireducens Rf4 5164380 YP_001229785.1 CDS Gura_1006 NC_009483.1 1195335 1196456 D PFAM: metal-dependent phosphohydrolase, HD sub domain; metal dependent phosphohydrolase 1195335..1196456 Geobacter uraniireducens Rf4 5164491 YP_001229786.1 CDS Gura_1007 NC_009483.1 1196453 1197178 D PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 1196453..1197178 Geobacter uraniireducens Rf4 5164492 YP_001229787.1 CDS Gura_1008 NC_009483.1 1197201 1197452 R hypothetical protein complement(1197201..1197452) Geobacter uraniireducens Rf4 5164493 YP_001229788.1 CDS Gura_1009 NC_009483.1 1197436 1197711 R PFAM: protein of unknown function DUF497; hypothetical protein complement(1197436..1197711) Geobacter uraniireducens Rf4 5164527 YP_001229789.1 CDS Gura_1010 NC_009483.1 1197823 1198179 R hypothetical protein complement(1197823..1198179) Geobacter uraniireducens Rf4 5164528 YP_001229790.1 CDS Gura_1011 NC_009483.1 1198169 1199332 R PFAM: protein of unknown function DUF1016; hypothetical protein complement(1198169..1199332) Geobacter uraniireducens Rf4 5164529 YP_001229791.1 CDS Gura_1012 NC_009483.1 1199884 1200879 R hypothetical protein complement(1199884..1200879) Geobacter uraniireducens Rf4 5164717 YP_001229792.1 CDS Gura_1013 NC_009483.1 1200866 1205242 R chromosome segregation ATPase-like protein complement(1200866..1205242) Geobacter uraniireducens Rf4 5164718 YP_001229793.1 CDS Gura_1014 NC_009483.1 1205235 1205984 R hypothetical protein complement(1205235..1205984) Geobacter uraniireducens Rf4 5164719 YP_001229794.1 CDS Gura_1015 NC_009483.1 1205981 1207507 R hypothetical protein complement(1205981..1207507) Geobacter uraniireducens Rf4 5164862 YP_001229795.1 CDS Gura_1016 NC_009483.1 1207842 1208999 R PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; XRE family plasmid maintenance system antidote protein complement(1207842..1208999) Geobacter uraniireducens Rf4 5164863 YP_001229796.1 CDS Gura_1017 NC_009483.1 1209625 1210623 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(1209625..1210623) Geobacter uraniireducens Rf4 5164864 YP_001229797.1 CDS Gura_1018 NC_009483.1 1210853 1212766 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(1210853..1212766) Geobacter uraniireducens Rf4 5164842 YP_001229798.1 CDS Gura_1019 NC_009483.1 1212914 1213900 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; NmrA family protein; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase complement(1212914..1213900) Geobacter uraniireducens Rf4 5164843 YP_001229799.1 CDS Gura_1020 NC_009483.1 1213911 1215950 R TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; squalene-hopene cyclase complement(1213911..1215950) Geobacter uraniireducens Rf4 5164844 YP_001229800.1 CDS Gura_1021 NC_009483.1 1216200 1218962 D RND efflux transporter 1216200..1218962 Geobacter uraniireducens Rf4 5165259 YP_001229801.1 CDS Gura_1022 NC_009483.1 1219021 1219623 D PFAM: putative rRNA methylase; putative rRNA methylase 1219021..1219623 Geobacter uraniireducens Rf4 5165260 YP_001229802.1 CDS Gura_1023 NC_009483.1 1219921 1220730 D PFAM: protein of unknown function DUF399; hypothetical protein 1219921..1220730 Geobacter uraniireducens Rf4 5165261 YP_001229803.1 CDS Gura_1024 NC_009483.1 1220895 1222385 D PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; sigma-54 dependent trancsriptional regulator 1220895..1222385 Geobacter uraniireducens Rf4 5164803 YP_001229804.1 CDS Gura_1025 NC_009483.1 1222428 1224689 D PFAM: helicase domain protein; type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; type III restriction enzyme, res subunit 1222428..1224689 Geobacter uraniireducens Rf4 5164804 YP_001229805.1 CDS Gura_1026 NC_009483.1 1224692 1226341 D PFAM: N-6 DNA methylase; N-6 DNA methylase 1224692..1226341 Geobacter uraniireducens Rf4 5164805 YP_001229806.1 CDS Gura_1027 NC_009483.1 1226341 1227603 D PFAM: restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit 1226341..1227603 Geobacter uraniireducens Rf4 5165238 YP_001229807.1 CDS Gura_1028 NC_009483.1 1227621 1227872 D hypothetical protein 1227621..1227872 Geobacter uraniireducens Rf4 5165239 YP_001229808.1 CDS Gura_1029 NC_009483.1 1227882 1229579 D hypothetical protein 1227882..1229579 Geobacter uraniireducens Rf4 5165240 YP_001229809.1 CDS Gura_1030 NC_009483.1 1229572 1230501 D hypothetical protein 1229572..1230501 Geobacter uraniireducens Rf4 5165377 YP_001229810.1 CDS Gura_1031 NC_009483.1 1230542 1231756 D ceramide glucosyltransferase 1230542..1231756 Geobacter uraniireducens Rf4 5165378 YP_001229811.1 CDS Gura_1032 NC_009483.1 1232056 1234122 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1232056..1234122 Geobacter uraniireducens Rf4 5165379 YP_001229812.1 CDS Gura_1033 NC_009483.1 1234570 1236195 D PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase 1234570..1236195 Geobacter uraniireducens Rf4 5166784 YP_001229813.1 CDS Gura_1034 NC_009483.1 1236385 1236735 D hypothetical protein 1236385..1236735 Geobacter uraniireducens Rf4 5166785 YP_001229814.1 CDS Gura_1035 NC_009483.1 1236940 1237236 D hypothetical protein 1236940..1237236 Geobacter uraniireducens Rf4 5166786 YP_001229815.1 CDS Gura_1036 NC_009483.1 1238065 1238637 R hypothetical protein complement(1238065..1238637) Geobacter uraniireducens Rf4 5165180 YP_001229816.1 CDS Gura_1037 NC_009483.1 1238983 1240140 R PFAM: General secretory system II, protein E domain protein; general secretion pathway protein E complement(1238983..1240140) Geobacter uraniireducens Rf4 5165181 YP_001229817.1 CDS Gura_1038 NC_009483.1 1240323 1241333 D member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 1240323..1241333 Geobacter uraniireducens Rf4 5165182 YP_001229818.1 CDS Gura_1039 NC_009483.1 1241408 1242178 D PFAM: protein of unknown function DUF140; hypothetical protein 1241408..1242178 Geobacter uraniireducens Rf4 5165804 YP_001229819.1 CDS Gura_1040 NC_009483.1 1242275 1243021 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1242275..1243021 Geobacter uraniireducens Rf4 5165805 YP_001229820.1 CDS Gura_1041 NC_009483.1 1243168 1243620 D PFAM: Mammalian cell entry related domain protein; hypothetical protein 1243168..1243620 Geobacter uraniireducens Rf4 5165806 YP_001229821.1 CDS Gura_1042 NC_009483.1 1243740 1245101 D PFAM: outer membrane efflux protein; outer membrane efflux protein 1243740..1245101 Geobacter uraniireducens Rf4 5165826 YP_001229822.1 CDS Gura_1043 NC_009483.1 1245138 1245746 D PFAM: toluene tolerance family protein; toluene tolerance family protein 1245138..1245746 Geobacter uraniireducens Rf4 5165827 YP_001229823.1 CDS Gura_1044 NC_009483.1 1245774 1246409 D TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 1245774..1246409 Geobacter uraniireducens Rf4 5165828 YP_001229824.1 CDS Gura_1045 NC_009483.1 1246595 1247683 D catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 1246595..1247683 Geobacter uraniireducens Rf4 5165807 YP_001229825.1 CDS Gura_1046 NC_009483.1 1247757 1248854 D catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 1247757..1248854 Geobacter uraniireducens Rf4 5165808 YP_001229826.1 CDS Gura_1047 NC_009483.1 1249100 1250119 D TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region; aspartate-semialdehyde dehydrogenase 1249100..1250119 Geobacter uraniireducens Rf4 5165809 YP_001229827.1 CDS truA NC_009483.1 1250158 1250892 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1250158..1250892 Geobacter uraniireducens Rf4 5166390 YP_001229828.1 CDS rplM NC_009483.1 1250999 1251430 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1250999..1251430 Geobacter uraniireducens Rf4 5166391 YP_001229829.1 CDS rpsI NC_009483.1 1251465 1251857 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1251465..1251857 Geobacter uraniireducens Rf4 5166392 YP_001229830.1 CDS argC NC_009483.1 1252000 1253040 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 1252000..1253040 Geobacter uraniireducens Rf4 5165881 YP_001229831.1 CDS Gura_1052 NC_009483.1 1253077 1254894 D PFAM: Radical SAM domain protein; Radical SAM N-terminal domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 1253077..1254894 Geobacter uraniireducens Rf4 5165882 YP_001229832.1 CDS Gura_1053 NC_009483.1 1255557 1256747 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1255557..1256747 Geobacter uraniireducens Rf4 5166003 YP_001229833.1 CDS rpmG NC_009483.1 1256805 1256954 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 1256805..1256954 Geobacter uraniireducens Rf4 5165124 YP_001229834.1 CDS secE NC_009483.1 1257096 1257290 D forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 1257096..1257290 Geobacter uraniireducens Rf4 5165126 YP_001229835.1 CDS Gura_1056 NC_009483.1 1257301 1257828 D TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein; NusG antitermination factor 1257301..1257828 Geobacter uraniireducens Rf4 5164775 YP_001229836.1 CDS rplK NC_009483.1 1257903 1258325 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 1257903..1258325 Geobacter uraniireducens Rf4 5164776 YP_001229837.1 CDS rplA NC_009483.1 1258347 1259048 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 1258347..1259048 Geobacter uraniireducens Rf4 5164568 YP_001229838.1 CDS rplJ NC_009483.1 1259242 1259766 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 1259242..1259766 Geobacter uraniireducens Rf4 5164569 YP_001229839.1 CDS rplL NC_009483.1 1259817 1260197 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 1259817..1260197 Geobacter uraniireducens Rf4 5164570 YP_001229840.1 CDS rpoB NC_009483.1 1260357 1264469 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 1260357..1264469 Geobacter uraniireducens Rf4 5163414 YP_001229841.1 CDS Gura_1062 NC_009483.1 1264567 1268700 D TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 4; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' 1264567..1268700 Geobacter uraniireducens Rf4 5163415 YP_001229842.1 CDS rpsL NC_009483.1 1268830 1269201 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 1268830..1269201 Geobacter uraniireducens Rf4 5163416 YP_001229843.1 CDS Gura_1064 NC_009483.1 1269224 1269694 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 1269224..1269694 Geobacter uraniireducens Rf4 5162888 YP_001229844.1 CDS Gura_1065 NC_009483.1 1269727 1271805 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1269727..1271805 Geobacter uraniireducens Rf4 5162889 YP_001229845.1 CDS Gura_1066 NC_009483.1 1271835 1273025 D EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1271835..1273025 Geobacter uraniireducens Rf4 5162890 YP_001229846.1 CDS rplC NC_009483.1 1273383 1274018 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1273383..1274018 Geobacter uraniireducens Rf4 5166004 YP_001229847.1 CDS rplD NC_009483.1 1274040 1274663 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1274040..1274663 Geobacter uraniireducens Rf4 5166005 YP_001229848.1 CDS rplW NC_009483.1 1274660 1274944 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1274660..1274944 Geobacter uraniireducens Rf4 5166006 YP_001229849.1 CDS rplB NC_009483.1 1274967 1275791 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1274967..1275791 Geobacter uraniireducens Rf4 5166040 YP_001229850.1 CDS rpsS NC_009483.1 1275822 1276103 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1275822..1276103 Geobacter uraniireducens Rf4 5166041 YP_001229851.1 CDS rplV NC_009483.1 1276123 1276458 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1276123..1276458 Geobacter uraniireducens Rf4 5166042 YP_001229852.1 CDS rpsC NC_009483.1 1276482 1277114 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 1276482..1277114 Geobacter uraniireducens Rf4 5166037 YP_001229853.1 CDS rplP NC_009483.1 1277136 1277558 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1277136..1277558 Geobacter uraniireducens Rf4 5166038 YP_003856783.1 CDS Gura_4500 NC_009483.1 1277548 1277736 D 50S ribosomal protein L29 1277548..1277736 Geobacter uraniireducens Rf4 9711824 YP_001229854.1 CDS rpsQ NC_009483.1 1277696 1278004 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 1277696..1278004 Geobacter uraniireducens Rf4 5166039 YP_001229855.1 CDS rplN NC_009483.1 1278018 1278386 D binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 1278018..1278386 Geobacter uraniireducens Rf4 5166295 YP_001229856.1 CDS rplX NC_009483.1 1278404 1278733 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1278404..1278733 Geobacter uraniireducens Rf4 5166296 YP_001229857.1 CDS rplE NC_009483.1 1278747 1279286 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1278747..1279286 Geobacter uraniireducens Rf4 5166297 YP_001229858.1 CDS rpsN NC_009483.1 1279305 1279490 D located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 1279305..1279490 Geobacter uraniireducens Rf4 5165694 YP_001229859.1 CDS rpsH NC_009483.1 1279525 1279923 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1279525..1279923 Geobacter uraniireducens Rf4 5165695 YP_001229860.1 CDS rplF NC_009483.1 1279951 1280490 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1279951..1280490 Geobacter uraniireducens Rf4 5165696 YP_001229861.1 CDS rplR NC_009483.1 1280512 1280880 D binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1280512..1280880 Geobacter uraniireducens Rf4 5165637 YP_001229862.1 CDS rpsE NC_009483.1 1280904 1281392 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1280904..1281392 Geobacter uraniireducens Rf4 5165638 YP_001229863.1 CDS rpmD NC_009483.1 1281422 1281601 D L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 1281422..1281601 Geobacter uraniireducens Rf4 5165639 YP_001229864.1 CDS rplO NC_009483.1 1281619 1282059 D late assembly protein; 50S ribosomal protein L15 1281619..1282059 Geobacter uraniireducens Rf4 5165380 YP_001229865.1 CDS secY NC_009483.1 1282062 1283369 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1282062..1283369 Geobacter uraniireducens Rf4 5165381 YP_001229866.1 CDS adk NC_009483.1 1283388 1284041 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1283388..1284041 Geobacter uraniireducens Rf4 5165382 YP_001229867.1 CDS Gura_1088 NC_009483.1 1284074 1284784 D TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase 1284074..1284784 Geobacter uraniireducens Rf4 5163493 YP_001229868.1 CDS rpsM NC_009483.1 1284964 1285332 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1284964..1285332 Geobacter uraniireducens Rf4 5163494 YP_001229869.1 CDS Gura_1090 NC_009483.1 1285355 1285750 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1285355..1285750 Geobacter uraniireducens Rf4 5163495 YP_001229870.1 CDS rpsD NC_009483.1 1285783 1286409 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1285783..1286409 Geobacter uraniireducens Rf4 5162997 YP_001229871.1 CDS Gura_1092 NC_009483.1 1286444 1287466 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1286444..1287466 Geobacter uraniireducens Rf4 5162998 YP_001229872.1 CDS rplQ NC_009483.1 1287502 1288056 D is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1287502..1288056 Geobacter uraniireducens Rf4 5162999 YP_001229873.1 CDS Gura_1094 NC_009483.1 1288230 1291760 D TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; chromosome segregation protein SMC 1288230..1291760 Geobacter uraniireducens Rf4 5163292 YP_001229874.1 CDS Gura_1095 NC_009483.1 1291829 1292188 D PFAM: Roadblock/LC7 family protein; roadblock/LC7 family protein 1291829..1292188 Geobacter uraniireducens Rf4 5163293 YP_001229875.1 CDS Gura_1096 NC_009483.1 1292189 1293211 D TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 1292189..1293211 Geobacter uraniireducens Rf4 5163294 YP_001229876.1 CDS Gura_1097 NC_009483.1 1293230 1293466 D hypothetical protein 1293230..1293466 Geobacter uraniireducens Rf4 5162921 YP_001229877.1 CDS Gura_1098 NC_009483.1 1293463 1293744 D hypothetical protein 1293463..1293744 Geobacter uraniireducens Rf4 5162922 YP_001229878.1 CDS Gura_1099 NC_009483.1 1294078 1294635 D PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 1294078..1294635 Geobacter uraniireducens Rf4 5162923 YP_001229879.1 CDS Gura_1100 NC_009483.1 1294667 1296232 D protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1294667..1296232 Geobacter uraniireducens Rf4 5162991 YP_001229880.1 CDS Gura_1101 NC_009483.1 1296222 1297010 D PFAM: metallophosphoesterase; metallophosphoesterase 1296222..1297010 Geobacter uraniireducens Rf4 5162992 YP_001229881.1 CDS Gura_1102 NC_009483.1 1297150 1298361 D catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 1297150..1298361 Geobacter uraniireducens Rf4 5162993 YP_001229882.1 CDS Gura_1103 NC_009483.1 1298552 1298782 D hypothetical protein 1298552..1298782 Geobacter uraniireducens Rf4 5162709 YP_001229883.1 CDS Gura_1104 NC_009483.1 1299011 1299574 D hypothetical protein 1299011..1299574 Geobacter uraniireducens Rf4 5162710 YP_001229884.1 CDS Gura_1105 NC_009483.1 1299680 1300960 D PFAM: Integrase, catalytic region; integrase catalytic subunit 1299680..1300960 Geobacter uraniireducens Rf4 5162711 YP_001229885.1 CDS Gura_1106 NC_009483.1 1300960 1301787 D SMART: AAA ATPase; ATPase AAA 1300960..1301787 Geobacter uraniireducens Rf4 5163156 YP_001229886.1 CDS Gura_1107 NC_009483.1 1301784 1301954 D hypothetical protein 1301784..1301954 Geobacter uraniireducens Rf4 5163157 YP_001229887.1 CDS Gura_1108 NC_009483.1 1302185 1302478 D hypothetical protein 1302185..1302478 Geobacter uraniireducens Rf4 5163620 YP_001229888.1 CDS Gura_1109 NC_009483.1 1308144 1309169 D hypothetical protein 1308144..1309169 Geobacter uraniireducens Rf4 5166865 YP_001229889.1 CDS Gura_1110 NC_009483.1 1309377 1312625 D PFAM: transcriptional activator domain; transcriptional activator domain-containing protein 1309377..1312625 Geobacter uraniireducens Rf4 5165479 YP_001229890.1 CDS Gura_1111 NC_009483.1 1312759 1313217 D hypothetical protein 1312759..1313217 Geobacter uraniireducens Rf4 5165480 YP_001229891.1 CDS Gura_1112 NC_009483.1 1313758 1315173 D SMART: LamG domain protein jellyroll fold domain protein; LamG domain-containing protein 1313758..1315173 Geobacter uraniireducens Rf4 5165481 YP_001229892.1 CDS Gura_1113 NC_009483.1 1315233 1316135 D hypothetical protein 1315233..1316135 Geobacter uraniireducens Rf4 5166140 YP_001229893.1 CDS Gura_1114 NC_009483.1 1316270 1317241 D hypothetical protein 1316270..1317241 Geobacter uraniireducens Rf4 5166141 YP_001229894.1 CDS Gura_1115 NC_009483.1 1317243 1318916 D hypothetical protein 1317243..1318916 Geobacter uraniireducens Rf4 5166142 YP_001229895.1 CDS Gura_1117 NC_009483.1 1320634 1321191 D hypothetical protein 1320634..1321191 Geobacter uraniireducens Rf4 5166180 YP_001229896.1 CDS Gura_1118 NC_009483.1 1321262 1321453 D hypothetical protein 1321262..1321453 Geobacter uraniireducens Rf4 5166181 YP_001229897.1 CDS Gura_1119 NC_009483.1 1321688 1322518 D hypothetical protein 1321688..1322518 Geobacter uraniireducens Rf4 5166367 YP_001229898.1 CDS Gura_1120 NC_009483.1 1322798 1323247 R hypothetical protein complement(1322798..1323247) Geobacter uraniireducens Rf4 5166368 YP_001229899.1 CDS Gura_1121 NC_009483.1 1323276 1323971 R PFAM: sugar fermentation stimulation protein; sugar fermentation stimulation protein complement(1323276..1323971) Geobacter uraniireducens Rf4 5166369 YP_001229900.1 CDS Gura_1122 NC_009483.1 1324027 1325304 R PFAM: nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase, large subunit complement(1324027..1325304) Geobacter uraniireducens Rf4 5166337 YP_001229901.1 CDS Gura_1123 NC_009483.1 1325288 1326043 R PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase, 20 kDa subunit complement(1325288..1326043) Geobacter uraniireducens Rf4 5166338 YP_001229902.1 CDS Gura_1124 NC_009483.1 1326040 1326888 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD-binding subunit complement(1326040..1326888) Geobacter uraniireducens Rf4 5166339 YP_001229903.1 CDS Gura_1125 NC_009483.1 1327093 1328076 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(1327093..1328076) Geobacter uraniireducens Rf4 5166853 YP_001229904.1 CDS Gura_1126 NC_009483.1 1328358 1329902 R PFAM: outer membrane efflux protein; outer membrane efflux protein complement(1328358..1329902) Geobacter uraniireducens Rf4 5166854 YP_001229905.1 CDS Gura_1127 NC_009483.1 1329933 1331162 R PFAM: protein of unknown function DUF214; hypothetical protein complement(1329933..1331162) Geobacter uraniireducens Rf4 5166855 YP_001229906.1 CDS Gura_1128 NC_009483.1 1331159 1331884 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1331159..1331884) Geobacter uraniireducens Rf4 5166197 YP_001229907.1 CDS Gura_1129 NC_009483.1 1331885 1333108 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(1331885..1333108) Geobacter uraniireducens Rf4 5166198 YP_001229908.1 CDS Gura_1130 NC_009483.1 1333140 1333586 R PFAM: regulatory protein, MarR; MarR family transcriptional regulator complement(1333140..1333586) Geobacter uraniireducens Rf4 5166199 YP_001229909.1 CDS Gura_1131 NC_009483.1 1333806 1334402 D PFAM: phosphoesterase, PA-phosphatase related; PA-phosphatase-like protein 1333806..1334402 Geobacter uraniireducens Rf4 5166155 YP_001229910.1 CDS Gura_1132 NC_009483.1 1334448 1335674 R PFAM: UMUC domain protein DNA-repair protein; DNA-directed DNA polymerase complement(1334448..1335674) Geobacter uraniireducens Rf4 5166156 YP_001229911.1 CDS Gura_1133 NC_009483.1 1335679 1336050 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(1335679..1336050) Geobacter uraniireducens Rf4 5166157 YP_001229912.1 CDS Gura_1134 NC_009483.1 1336040 1336459 R TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein, HI0074; nucleotidyltransferase substrate binding protein complement(1336040..1336459) Geobacter uraniireducens Rf4 5165655 YP_001229913.1 CDS Gura_1136 NC_009483.1 1337269 1337502 D PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 1337269..1337502 Geobacter uraniireducens Rf4 5165657 YP_001229914.1 CDS Gura_1137 NC_009483.1 1337512 1337976 D hypothetical protein 1337512..1337976 Geobacter uraniireducens Rf4 5165429 YP_001229915.1 CDS Gura_1138 NC_009483.1 1338288 1338689 R PFAM: PilT protein domain protein; PilT domain-containing protein complement(1338288..1338689) Geobacter uraniireducens Rf4 5165430 YP_001229916.1 CDS Gura_1139 NC_009483.1 1339088 1339525 R SMART: Nucleotide binding protein, PINc; nucleotide binding protein, PINc complement(1339088..1339525) Geobacter uraniireducens Rf4 5165431 YP_001229917.1 CDS Gura_1140 NC_009483.1 1339529 1339795 R TIGRFAM: prevent-host-death family protein; prevent-host-death family protein complement(1339529..1339795) Geobacter uraniireducens Rf4 5165473 YP_001229918.1 CDS Gura_1141 NC_009483.1 1339915 1340160 R hypothetical protein complement(1339915..1340160) Geobacter uraniireducens Rf4 5165474 YP_001229919.1 CDS Gura_1142 NC_009483.1 1340193 1340798 R TIGRFAM: LexA repressor; PFAM: peptidase S24, S26A and S26B; LexA DNA-binding domain protein; SOS-response transcriptional repressor LexA complement(1340193..1340798) Geobacter uraniireducens Rf4 5165475 YP_001229920.1 CDS Gura_1143 NC_009483.1 1340959 1342257 D PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; hypothetical protein 1340959..1342257 Geobacter uraniireducens Rf4 5165649 YP_001229921.1 CDS Gura_1144 NC_009483.1 1342349 1343281 R PFAM: Integral membrane protein TerC; integral membrane protein TerC complement(1342349..1343281) Geobacter uraniireducens Rf4 5165650 YP_001229922.1 CDS Gura_1145 NC_009483.1 1343402 1344259 R PFAM: peptidase M48, Ste24p; peptidase M48, Ste24p complement(1343402..1344259) Geobacter uraniireducens Rf4 5165651 YP_001229923.1 CDS Gura_1146 NC_009483.1 1344534 1345100 R PFAM: response regulator receiver; ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein complement(1344534..1345100) Geobacter uraniireducens Rf4 5165183 YP_001229924.1 CDS Gura_1147 NC_009483.1 1345234 1346220 D PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein 1345234..1346220 Geobacter uraniireducens Rf4 5165184 YP_001229925.1 CDS Gura_1148 NC_009483.1 1346317 1347240 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1346317..1347240 Geobacter uraniireducens Rf4 5165185 YP_001229926.1 CDS Gura_1149 NC_009483.1 1347240 1348214 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1347240..1348214 Geobacter uraniireducens Rf4 5164930 YP_001229927.1 CDS Gura_1150 NC_009483.1 1348468 1349601 D PFAM: ABC-2 type transporter; ABC-2 type transporter 1348468..1349601 Geobacter uraniireducens Rf4 5164931 YP_001229928.1 CDS Gura_1151 NC_009483.1 1349830 1350960 D PFAM: ABC-2 type transporter; ABC-2 type transporter 1349830..1350960 Geobacter uraniireducens Rf4 5164932 YP_001229929.1 CDS Gura_1152 NC_009483.1 1351156 1352622 D PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; type IV pilus assembly PilZ; SMART: AAA ATPase; sigma-54 dependent trancsriptional regulator 1351156..1352622 Geobacter uraniireducens Rf4 5164815 YP_001229930.1 CDS Gura_1153 NC_009483.1 1352927 1353958 D hypothetical protein 1352927..1353958 Geobacter uraniireducens Rf4 5164816 YP_001229931.1 CDS Gura_1154 NC_009483.1 1354067 1354471 D hypothetical protein 1354067..1354471 Geobacter uraniireducens Rf4 5164817 YP_001229932.1 CDS Gura_1155 NC_009483.1 1354572 1355183 D PFAM: peptidase C39, bacteriocin processing; peptidase C39, bacteriocin processing 1354572..1355183 Geobacter uraniireducens Rf4 5164632 YP_001229933.1 CDS Gura_1156 NC_009483.1 1355180 1355695 D hypothetical protein 1355180..1355695 Geobacter uraniireducens Rf4 5164633 YP_001229934.1 CDS Gura_1157 NC_009483.1 1355786 1356997 R hypothetical protein complement(1355786..1356997) Geobacter uraniireducens Rf4 5164634 YP_001229935.1 CDS Gura_1158 NC_009483.1 1357708 1362261 D TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; FG-GAP repeat protein; YD repeat-containing protein 1357708..1362261 Geobacter uraniireducens Rf4 5164723 YP_001229936.1 CDS Gura_1159 NC_009483.1 1362528 1363202 D PFAM: OmpW family protein; OmpW family protein 1362528..1363202 Geobacter uraniireducens Rf4 5164724 YP_001229937.1 CDS Gura_1160 NC_009483.1 1363840 1368813 D hypothetical protein 1363840..1368813 Geobacter uraniireducens Rf4 5164725 YP_001229938.1 CDS Gura_1161 NC_009483.1 1369345 1375053 D hypothetical protein 1369345..1375053 Geobacter uraniireducens Rf4 5163511 YP_001229939.1 CDS Gura_1162 NC_009483.1 1375162 1376469 D hypothetical protein 1375162..1376469 Geobacter uraniireducens Rf4 5163512 YP_001229940.1 CDS Gura_1163 NC_009483.1 1376732 1377169 R hypothetical protein complement(1376732..1377169) Geobacter uraniireducens Rf4 5163513 YP_001229941.1 CDS Gura_1164 NC_009483.1 1377479 1377787 R hypothetical protein complement(1377479..1377787) Geobacter uraniireducens Rf4 5164951 YP_001229942.1 CDS Gura_1165 NC_009483.1 1378008 1378325 D PFAM: protein of unknown function YGGT; hypothetical protein 1378008..1378325 Geobacter uraniireducens Rf4 5164952 YP_001229943.1 CDS Gura_1166 NC_009483.1 1378322 1378771 D PFAM: DivIVA family protein; DivIVA family protein 1378322..1378771 Geobacter uraniireducens Rf4 5164953 YP_001229944.1 CDS Gura_1167 NC_009483.1 1378761 1379069 D PFAM: protein of unknown function DUF167; hypothetical protein 1378761..1379069 Geobacter uraniireducens Rf4 5164738 YP_001229945.1 CDS Gura_1168 NC_009483.1 1379244 1379492 D TIGRFAM: putative regulatory protein, FmdB family; FmdB family regulatory protein 1379244..1379492 Geobacter uraniireducens Rf4 5164739 YP_001229946.1 CDS Gura_1169 NC_009483.1 1379785 1380627 D PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; methylenetetrahydrofolate dehydrogenase 1379785..1380627 Geobacter uraniireducens Rf4 5164740 YP_001229947.1 CDS Gura_1170 NC_009483.1 1380895 1381542 D hypothetical protein 1380895..1381542 Geobacter uraniireducens Rf4 5164175 YP_001229948.1 CDS Gura_1171 NC_009483.1 1381551 1382444 D PFAM: methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase 1381551..1382444 Geobacter uraniireducens Rf4 5164176 YP_001229949.1 CDS Gura_1172 NC_009483.1 1382577 1383458 D TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase GalU 1382577..1383458 Geobacter uraniireducens Rf4 5164177 YP_001229950.1 CDS Gura_1173 NC_009483.1 1383505 1384353 R TIGRFAM: TonB family protein; TonB family protein complement(1383505..1384353) Geobacter uraniireducens Rf4 5163058 YP_001229951.1 CDS Gura_1174 NC_009483.1 1384443 1385033 R PFAM: protein of unknown function UPF0016; hypothetical protein complement(1384443..1385033) Geobacter uraniireducens Rf4 5163059 YP_001229952.1 CDS Gura_1175 NC_009483.1 1385423 1386292 D TIGRFAM: nitrogenase iron protein; PFAM: NifH/frxC-family protein; nitrogenase iron protein 1385423..1386292 Geobacter uraniireducens Rf4 5163060 YP_001229953.1 CDS Gura_1176 NC_009483.1 1386379 1387818 D TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase, component 1; nitrogenase molybdenum-iron protein subunit alpha 1386379..1387818 Geobacter uraniireducens Rf4 5163919 YP_001229954.1 CDS Gura_1177 NC_009483.1 1387961 1389424 D TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase, component 1; nitrogenase molybdenum-iron protein subunit beta 1387961..1389424 Geobacter uraniireducens Rf4 5163920 YP_001229955.1 CDS Gura_1178 NC_009483.1 1389969 1390310 D hypothetical protein 1389969..1390310 Geobacter uraniireducens Rf4 5164220 YP_001229956.1 CDS Gura_1179 NC_009483.1 1390316 1391692 D hypothetical protein 1390316..1391692 Geobacter uraniireducens Rf4 5164221 YP_001229957.1 CDS Gura_1180 NC_009483.1 1391931 1392995 D virulence protein-like protein 1391931..1392995 Geobacter uraniireducens Rf4 5164222 YP_001229958.1 CDS Gura_1181 NC_009483.1 1393103 1393816 D hypothetical protein 1393103..1393816 Geobacter uraniireducens Rf4 5163747 YP_001229959.1 CDS Gura_1182 NC_009483.1 1393923 1395458 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA family drug resistance transporter complement(1393923..1395458) Geobacter uraniireducens Rf4 5163748 YP_001229960.1 CDS Gura_1183 NC_009483.1 1395467 1396531 R PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein complement(1395467..1396531) Geobacter uraniireducens Rf4 5163749 YP_001229961.1 CDS Gura_1184 NC_009483.1 1396783 1397739 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(1396783..1397739) Geobacter uraniireducens Rf4 5164160 YP_001229962.1 CDS Gura_1185 NC_009483.1 1397935 1398921 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(1397935..1398921) Geobacter uraniireducens Rf4 5164161 YP_001229963.1 CDS Gura_1186 NC_009483.1 1398918 1399739 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(1398918..1399739) Geobacter uraniireducens Rf4 5164162 YP_001229964.1 CDS Gura_1187 NC_009483.1 1399732 1400685 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(1399732..1400685) Geobacter uraniireducens Rf4 5163043 YP_001229965.1 CDS Gura_1188 NC_009483.1 1401063 1401437 R PFAM: protein of unknown function DUF559; hypothetical protein complement(1401063..1401437) Geobacter uraniireducens Rf4 5163044 YP_001229966.1 CDS Gura_1189 NC_009483.1 1401617 1403188 R PFAM: extracellular solute-binding protein, family 5; 4-phytase complement(1401617..1403188) Geobacter uraniireducens Rf4 5163045 YP_001229967.1 CDS Gura_1190 NC_009483.1 1403276 1403887 R PFAM: regulatory protein, TetR; TetR family transcriptional regulator complement(1403276..1403887) Geobacter uraniireducens Rf4 5163224 YP_001229968.1 CDS Gura_1191 NC_009483.1 1404295 1406835 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; SMART: PAS domain containing protein; methyl-accepting chemotaxis sensory transducer complement(1404295..1406835) Geobacter uraniireducens Rf4 5163225 YP_001229969.1 CDS Gura_1192 NC_009483.1 1407140 1407562 R PFAM: beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin complement(1407140..1407562) Geobacter uraniireducens Rf4 5163226 YP_001229970.1 CDS Gura_1193 NC_009483.1 1407611 1408456 R PFAM: UBA/THIF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein complement(1407611..1408456) Geobacter uraniireducens Rf4 5163632 YP_001229971.1 CDS Gura_1194 NC_009483.1 1408458 1408682 R PFAM: thiamineS protein; sulfur transfer protein ThiS complement(1408458..1408682) Geobacter uraniireducens Rf4 5163633 YP_001229972.1 CDS Gura_1195 NC_009483.1 1408698 1410428 R PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase-like; aldehyde ferredoxin oxidoreductase complement(1408698..1410428) Geobacter uraniireducens Rf4 5163634 YP_001229973.1 CDS Gura_1196 NC_009483.1 1410449 1411612 R PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(1410449..1411612) Geobacter uraniireducens Rf4 5163209 YP_001229974.1 CDS Gura_1197 NC_009483.1 1411953 1412576 R PFAM: isochorismatase hydrolase; isochorismatase hydrolase complement(1411953..1412576) Geobacter uraniireducens Rf4 5163210 YP_001229975.1 CDS Gura_1198 NC_009483.1 1412746 1413636 D PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator 1412746..1413636 Geobacter uraniireducens Rf4 5163211 YP_001229976.1 CDS Gura_1199 NC_009483.1 1413699 1414094 R PFAM: HEPN domain protein; HEPN domain-containing protein complement(1413699..1414094) Geobacter uraniireducens Rf4 5163244 YP_001229977.1 CDS Gura_1200 NC_009483.1 1414091 1414426 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(1414091..1414426) Geobacter uraniireducens Rf4 5163245 YP_001229978.1 CDS Gura_1201 NC_009483.1 1414832 1417585 D in some organisms the NifE and NifN proteins are encoded separately; functions in assembly of FeMo cofactor; functions in assembly of nitrogenase MoFe; bifunctional nitrogenase molybdenum-cofactor biosynthesis protein NifE/NifN 1414832..1417585 Geobacter uraniireducens Rf4 5163246 YP_001229979.1 CDS Gura_1202 NC_009483.1 1417809 1418195 D TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; nitrogen fixation protein NifX 1417809..1418195 Geobacter uraniireducens Rf4 5163457 YP_001229980.1 CDS Gura_1203 NC_009483.1 1418263 1418526 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1418263..1418526 Geobacter uraniireducens Rf4 5163458 YP_001229981.1 CDS Gura_1204 NC_009483.1 1418680 1419009 D PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; dinitrogenase iron-molybdenum cofactor biosynthesis protein 1418680..1419009 Geobacter uraniireducens Rf4 5163459 YP_001229982.1 CDS Gura_1205 NC_009483.1 1419041 1419877 D PFAM: Dinitrogenase reductase ADP-ribosyltransferase; NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase 1419041..1419877 Geobacter uraniireducens Rf4 5162721 YP_001229983.1 CDS Gura_1206 NC_009483.1 1420206 1420793 D hypothetical protein 1420206..1420793 Geobacter uraniireducens Rf4 5162722 YP_001229984.1 CDS Gura_1207 NC_009483.1 1421037 1422575 D hypothetical protein 1421037..1422575 Geobacter uraniireducens Rf4 5162723 YP_001229985.1 CDS Gura_1208 NC_009483.1 1422627 1423658 R TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase; PFAM: ADP-ribosylation/Crystallin J1; ADP-ribosyl-(dinitrogen reductase) hydrolase complement(1422627..1423658) Geobacter uraniireducens Rf4 5164536 YP_001229986.1 CDS Gura_1209 NC_009483.1 1424064 1424930 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 1424064..1424930 Geobacter uraniireducens Rf4 5164537 YP_001229987.1 CDS Gura_1210 NC_009483.1 1425121 1425930 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1425121..1425930 Geobacter uraniireducens Rf4 5164538 YP_001229988.1 CDS Gura_1211 NC_009483.1 1426276 1427088 D PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta 1426276..1427088 Geobacter uraniireducens Rf4 5162685 YP_001229989.1 CDS Gura_1212 NC_009483.1 1427264 1428589 D PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; electron transfer flavoprotein subunit alpha 1427264..1428589 Geobacter uraniireducens Rf4 5162686 YP_001229990.1 CDS Gura_1213 NC_009483.1 1428818 1430803 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 1428818..1430803 Geobacter uraniireducens Rf4 5162687 YP_001229991.1 CDS Gura_1214 NC_009483.1 1430894 1431583 D PFAM: glutamine amidotransferase class-I; glutamine amidotransferase 1430894..1431583 Geobacter uraniireducens Rf4 5166790 YP_001229992.1 CDS Gura_1215 NC_009483.1 1431721 1432002 D PFAM: plasmid maintenance system killer; plasmid maintenance system killer protein 1431721..1432002 Geobacter uraniireducens Rf4 5166791 YP_001229993.1 CDS Gura_1216 NC_009483.1 1432013 1432318 D TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; XRE family plasmid maintenance system antidote protein 1432013..1432318 Geobacter uraniireducens Rf4 5166792 YP_001229994.1 CDS Gura_1217 NC_009483.1 1434050 1434916 D PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding; transcription activator, effector binding 1434050..1434916 Geobacter uraniireducens Rf4 5163928 YP_001229995.1 CDS Gura_1218 NC_009483.1 1435232 1435633 R PFAM: CopG domain protein DNA-binding domain protein; protein of unknown function UPF0150; hypothetical protein complement(1435232..1435633) Geobacter uraniireducens Rf4 5163929 YP_001229996.1 CDS Gura_1219 NC_009483.1 1436011 1438290 R PFAM: glycosyl hydrolase, BNR repeat-containing protein; metallophosphoesterase; metallophosphoesterase complement(1436011..1438290) Geobacter uraniireducens Rf4 5163930 YP_001229997.1 CDS Gura_1220 NC_009483.1 1438690 1440144 D PFAM: ribonuclease H; 5'-3' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2; ribonuclease H 1438690..1440144 Geobacter uraniireducens Rf4 5164187 YP_001229998.1 CDS Gura_1221 NC_009483.1 1440161 1442074 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase complement(1440161..1442074) Geobacter uraniireducens Rf4 5164188 YP_001229999.1 CDS Gura_1222 NC_009483.1 1442250 1442957 R PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator complement(1442250..1442957) Geobacter uraniireducens Rf4 5164189 YP_001230000.1 CDS Gura_1223 NC_009483.1 1443673 1444977 D PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 1443673..1444977 Geobacter uraniireducens Rf4 5166034 YP_001230001.1 CDS Gura_1224 NC_009483.1 1445212 1447881 R PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Osmosensitive K+ channel His kinase sensor; UspA domain protein; osmosensitive K+ channel signal transduction histidine kinase complement(1445212..1447881) Geobacter uraniireducens Rf4 5166035 YP_001230002.1 CDS Gura_1225 NC_009483.1 1447878 1448447 R TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K+ transporting ATPase, KdpC subunit; potassium-transporting ATPase subunit C complement(1447878..1448447) Geobacter uraniireducens Rf4 5166036 YP_001230003.1 CDS Gura_1226 NC_009483.1 1448552 1450618 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; K+-transporting ATPase B complement(1448552..1450618) Geobacter uraniireducens Rf4 5166238 YP_001230004.1 CDS Gura_1227 NC_009483.1 1450797 1452575 R catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase A complement(1450797..1452575) Geobacter uraniireducens Rf4 5166239 YP_001230005.1 CDS Gura_1228 NC_009483.1 1452862 1453347 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Contains selenocysteine; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1452862..1453347 Geobacter uraniireducens Rf4 5166240 YP_001230006.1 CDS Gura_1229 NC_009483.1 1453499 1454056 D PFAM: DTW domain containing protein; DTW domain-containing protein 1453499..1454056 Geobacter uraniireducens Rf4 5166218 YP_001230007.1 CDS Gura_1230 NC_009483.1 1454988 1455401 D hypothetical protein 1454988..1455401 Geobacter uraniireducens Rf4 5166219 YP_001230008.1 CDS Gura_1231 NC_009483.1 1455720 1456154 D hypothetical protein 1455720..1456154 Geobacter uraniireducens Rf4 5166220 YP_001230009.1 CDS Gura_1232 NC_009483.1 1456154 1457152 D PFAM: Integrase, catalytic region; integrase catalytic subunit 1456154..1457152 Geobacter uraniireducens Rf4 5166760 YP_001230010.1 CDS Gura_1233 NC_009483.1 1457523 1458152 R hypothetical protein complement(1457523..1458152) Geobacter uraniireducens Rf4 5166761 YP_001230011.1 CDS Gura_1234 NC_009483.1 1459128 1460447 D hypothetical protein 1459128..1460447 Geobacter uraniireducens Rf4 5166762 YP_001230012.1 CDS Gura_1235 NC_009483.1 1460969 1462564 R hypothetical protein complement(1460969..1462564) Geobacter uraniireducens Rf4 5165727 YP_001230013.1 CDS Gura_1236 NC_009483.1 1462589 1462915 R hypothetical protein complement(1462589..1462915) Geobacter uraniireducens Rf4 5165728 YP_001230014.1 CDS Gura_1237 NC_009483.1 1462966 1464852 R TIGRFAM: YD repeat protein; YD repeat-containing protein complement(1462966..1464852) Geobacter uraniireducens Rf4 5165729 YP_001230015.1 CDS Gura_1238 NC_009483.1 1464976 1466001 R PFAM: Integrase, catalytic region; integrase catalytic subunit complement(1464976..1466001) Geobacter uraniireducens Rf4 5165145 YP_001230016.1 CDS Gura_1239 NC_009483.1 1465998 1466531 R hypothetical protein complement(1465998..1466531) Geobacter uraniireducens Rf4 5165146 YP_001230017.1 CDS Gura_1240 NC_009483.1 1466680 1470666 R TIGRFAM: YD repeat protein; YD repeat-containing protein complement(1466680..1470666) Geobacter uraniireducens Rf4 5165147 YP_001230018.1 CDS Gura_1241 NC_009483.1 1471163 1471723 R PFAM: nitroreductase; nitroreductase complement(1471163..1471723) Geobacter uraniireducens Rf4 5165733 YP_001230019.1 CDS Gura_1242 NC_009483.1 1471764 1472756 R hypothetical protein complement(1471764..1472756) Geobacter uraniireducens Rf4 5165734 YP_001230020.1 CDS Gura_1243 NC_009483.1 1472908 1473990 R PFAM: Mammalian cell entry related domain protein; hypothetical protein complement(1472908..1473990) Geobacter uraniireducens Rf4 5165735 YP_001230021.1 CDS Gura_1244 NC_009483.1 1473987 1474745 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1473987..1474745) Geobacter uraniireducens Rf4 5164687 YP_001230022.1 CDS Gura_1245 NC_009483.1 1475010 1475783 R PFAM: protein of unknown function DUF140; hypothetical protein complement(1475010..1475783) Geobacter uraniireducens Rf4 5164688 YP_001230023.1 CDS Gura_1246 NC_009483.1 1475790 1478108 R TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La complement(1475790..1478108) Geobacter uraniireducens Rf4 5164689 YP_001230024.1 CDS Gura_1247 NC_009483.1 1478178 1480115 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1478178..1480115) Geobacter uraniireducens Rf4 5165640 YP_001230025.1 CDS Gura_1248 NC_009483.1 1480200 1480601 R PFAM: plasmid stabilization system; plasmid stabilization system protein complement(1480200..1480601) Geobacter uraniireducens Rf4 5165641 YP_001230026.1 CDS Gura_1249 NC_009483.1 1480592 1480957 R transcriptional regulator-like protein complement(1480592..1480957) Geobacter uraniireducens Rf4 5165642 YP_001230027.1 CDS Gura_1250 NC_009483.1 1481220 1481558 R PFAM: HNH endonuclease; HNH endonuclease complement(1481220..1481558) Geobacter uraniireducens Rf4 5165415 YP_001230028.1 CDS Gura_1251 NC_009483.1 1481585 1481899 R hypothetical protein complement(1481585..1481899) Geobacter uraniireducens Rf4 5165416 YP_001230029.1 CDS Gura_1252 NC_009483.1 1481899 1482180 R PFAM: Post-segregation antitoxin CcdA; post-segregation antitoxin CcdA complement(1481899..1482180) Geobacter uraniireducens Rf4 5165417 YP_001230030.1 CDS Gura_1253 NC_009483.1 1482220 1482624 R PFAM: RNP-1 like RNA-binding protein; RNP-1 like RNA-binding protein complement(1482220..1482624) Geobacter uraniireducens Rf4 5165395 YP_001230031.1 CDS Gura_1254 NC_009483.1 1482685 1483170 R PFAM: DTW domain containing protein; DTW domain-containing protein complement(1482685..1483170) Geobacter uraniireducens Rf4 5165396 YP_001230032.1 CDS Gura_1255 NC_009483.1 1483167 1483403 R hypothetical protein complement(1483167..1483403) Geobacter uraniireducens Rf4 5165318 YP_001230033.1 CDS Gura_1256 NC_009483.1 1483775 1486153 D TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; ribonuclease 1483775..1486153 Geobacter uraniireducens Rf4 5165319 YP_001230034.1 CDS Gura_1257 NC_009483.1 1486200 1487027 D hypothetical protein 1486200..1487027 Geobacter uraniireducens Rf4 5165320 YP_001230035.1 CDS Gura_1258 NC_009483.1 1487045 1487419 D may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 1487045..1487419 Geobacter uraniireducens Rf4 5165202 YP_001230036.1 CDS Gura_1259 NC_009483.1 1487534 1487878 D PFAM: protein of unknown function DUF190; hypothetical protein 1487534..1487878 Geobacter uraniireducens Rf4 5165203 YP_001230037.1 CDS sucA NC_009483.1 1488022 1490718 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 1488022..1490718 Geobacter uraniireducens Rf4 5165204 YP_001230038.1 CDS Gura_1261 NC_009483.1 1490917 1492158 D TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 1490917..1492158 Geobacter uraniireducens Rf4 5164711 YP_001230039.1 CDS Gura_1262 NC_009483.1 1492210 1492527 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein 1492210..1492527 Geobacter uraniireducens Rf4 5164712 YP_001230040.1 CDS Gura_1263 NC_009483.1 1492505 1492810 D PFAM: plasmid stabilization system; plasmid stabilization system protein 1492505..1492810 Geobacter uraniireducens Rf4 5164713 YP_001230041.1 CDS Gura_1264 NC_009483.1 1492857 1494275 D TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; FAD dependent oxidoreductase; dihydrolipoamide dehydrogenase 1492857..1494275 Geobacter uraniireducens Rf4 5164508 YP_001230042.1 CDS Gura_1265 NC_009483.1 1494435 1496369 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1494435..1496369 Geobacter uraniireducens Rf4 5164509 YP_001230043.1 CDS Gura_1266 NC_009483.1 1496550 1497527 D PFAM: dehydrogenase, E1 component; pyruvate dehydrogenase 1496550..1497527 Geobacter uraniireducens Rf4 5164510 YP_001230044.1 CDS Gura_1267 NC_009483.1 1497781 1498767 D PFAM: Transketolase, central region; Transketolase domain protein; transketolase, central region 1497781..1498767 Geobacter uraniireducens Rf4 5164163 YP_001230045.1 CDS Gura_1268 NC_009483.1 1499070 1500329 D PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; branched-chain alpha-keto acid dehydrogenase subunit E2 1499070..1500329 Geobacter uraniireducens Rf4 5164164 YP_001230046.1 CDS Gura_1269 NC_009483.1 1500559 1501203 D TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; lipoate-protein ligase B 1500559..1501203 Geobacter uraniireducens Rf4 5164165 YP_001230047.1 CDS Gura_1270 NC_009483.1 1501264 1503681 D PFAM: peptidase S16, lon domain protein; peptidase S16, lon domain-containing protein 1501264..1503681 Geobacter uraniireducens Rf4 5164674 YP_001230048.1 CDS Gura_1271 NC_009483.1 1504010 1504642 R PFAM: NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) complement(1504010..1504642) Geobacter uraniireducens Rf4 5164675 YP_001230049.1 CDS Gura_1272 NC_009483.1 1504960 1505937 R meta-pathway phenol degradation-like protein complement(1504960..1505937) Geobacter uraniireducens Rf4 5164676 YP_001230050.1 CDS Gura_1273 NC_009483.1 1506010 1506921 R PFAM: DSBA oxidoreductase; DSBA oxidoreductase complement(1506010..1506921) Geobacter uraniireducens Rf4 5162730 YP_001230051.1 CDS Gura_1274 NC_009483.1 1507023 1507628 R PFAM: isochorismatase hydrolase; isochorismatase hydrolase complement(1507023..1507628) Geobacter uraniireducens Rf4 5162731 YP_001230052.1 CDS Gura_1275 NC_009483.1 1508110 1508946 D hypothetical protein 1508110..1508946 Geobacter uraniireducens Rf4 5162732 YP_001230053.1 CDS Gura_1277 NC_009483.1 1509199 1509534 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 1509199..1509534 Geobacter uraniireducens Rf4 5163479 YP_001230054.1 CDS Gura_1280 NC_009483.1 1510135 1510467 D hypothetical protein 1510135..1510467 Geobacter uraniireducens Rf4 5163974 YP_001230055.1 CDS Gura_1281 NC_009483.1 1510507 1511556 R PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic complement(1510507..1511556) Geobacter uraniireducens Rf4 5163975 YP_001230056.1 CDS Gura_1282 NC_009483.1 1511781 1513310 D PFAM: sigma-54 factor, interaction domain-containing protein; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; putative GAF sensor protein 1511781..1513310 Geobacter uraniireducens Rf4 5165813 YP_001230057.1 CDS Gura_1283 NC_009483.1 1513486 1514616 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(1513486..1514616) Geobacter uraniireducens Rf4 5165814 YP_001230058.1 CDS Gura_1284 NC_009483.1 1514627 1515571 R PFAM: response regulator receiver; CheW domain protein; putative CheW protein complement(1514627..1515571) Geobacter uraniireducens Rf4 5165815 YP_001230059.1 CDS Gura_1285 NC_009483.1 1515638 1517668 R PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; formate dehydrogenase complement(1515638..1517668) Geobacter uraniireducens Rf4 5164250 YP_001230060.1 CDS Gura_1286 NC_009483.1 1517926 1520505 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; Cache domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 1517926..1520505 Geobacter uraniireducens Rf4 5164251 YP_001230061.1 CDS Gura_1287 NC_009483.1 1520554 1521111 D PFAM: Chromate transporter; chromate transporter 1520554..1521111 Geobacter uraniireducens Rf4 5164252 YP_001230062.1 CDS Gura_1288 NC_009483.1 1521111 1521635 D PFAM: Chromate transporter; chromate transporter 1521111..1521635 Geobacter uraniireducens Rf4 5165365 YP_001230063.1 CDS Gura_1289 NC_009483.1 1521996 1522151 R hypothetical protein complement(1521996..1522151) Geobacter uraniireducens Rf4 5165366 YP_001230064.1 CDS Gura_1290 NC_009483.1 1522184 1522576 R TraR/DksA family transcriptional regulator complement(1522184..1522576) Geobacter uraniireducens Rf4 5165367 YP_001230065.1 CDS Gura_1291 NC_009483.1 1522815 1525226 D catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 1522815..1525226 Geobacter uraniireducens Rf4 5165196 YP_001230066.1 CDS Gura_1292 NC_009483.1 1526137 1527441 D PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 1526137..1527441 Geobacter uraniireducens Rf4 5165197 YP_001230067.1 CDS Gura_1293 NC_009483.1 1527676 1528830 D PFAM: protein of unknown function DUF214; hypothetical protein 1527676..1528830 Geobacter uraniireducens Rf4 5165198 YP_001230068.1 CDS Gura_1294 NC_009483.1 1528832 1529536 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1528832..1529536 Geobacter uraniireducens Rf4 5166131 YP_001230069.1 CDS Gura_1295 NC_009483.1 1529526 1530611 D PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein 1529526..1530611 Geobacter uraniireducens Rf4 5166132 YP_001230070.1 CDS Gura_1296 NC_009483.1 1530707 1531042 D PFAM: protein of unknown function DUF1622; hypothetical protein 1530707..1531042 Geobacter uraniireducens Rf4 5166133 YP_001230071.1 CDS Gura_1297 NC_009483.1 1531060 1532631 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein 1531060..1532631 Geobacter uraniireducens Rf4 5163831 YP_001230072.1 CDS Gura_1298 NC_009483.1 1532734 1534536 R PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(1532734..1534536) Geobacter uraniireducens Rf4 5163832 YP_001230073.1 CDS Gura_1299 NC_009483.1 1534607 1534906 D hypothetical protein 1534607..1534906 Geobacter uraniireducens Rf4 5163833 YP_001230074.1 CDS Gura_1300 NC_009483.1 1534909 1535331 D SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 1534909..1535331 Geobacter uraniireducens Rf4 5164524 YP_001230075.1 CDS Gura_1301 NC_009483.1 1535433 1535555 D hypothetical protein 1535433..1535555 Geobacter uraniireducens Rf4 5164525 YP_001230076.1 CDS Gura_1302 NC_009483.1 1535762 1537099 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 1535762..1537099 Geobacter uraniireducens Rf4 5164526 YP_001230077.1 CDS Gura_1303 NC_009483.1 1537395 1537664 R hypothetical protein complement(1537395..1537664) Geobacter uraniireducens Rf4 5164407 YP_001230078.1 CDS Gura_1304 NC_009483.1 1537927 1538202 R catalyzes the hydrolysis of acylphosphate; acylphosphatase complement(1537927..1538202) Geobacter uraniireducens Rf4 5164408 YP_001230079.1 CDS Gura_1305 NC_009483.1 1538363 1540381 R TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation; SMART: Helix-hairpin-helix DNA-binding, class 1; NAD-dependent DNA ligase-like; NAD-dependent DNA ligase complement(1538363..1540381) Geobacter uraniireducens Rf4 5164409 YP_001230080.1 CDS Gura_1306 NC_009483.1 1540792 1541901 D PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein 1540792..1541901 Geobacter uraniireducens Rf4 5164291 YP_001230081.1 CDS Gura_1307 NC_009483.1 1541901 1543574 D PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1541901..1543574 Geobacter uraniireducens Rf4 5164292 YP_001230082.1 CDS Gura_1308 NC_009483.1 1543567 1544628 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1543567..1544628 Geobacter uraniireducens Rf4 5164293 YP_001230083.1 CDS Gura_1309 NC_009483.1 1545101 1546246 D hypothetical protein 1545101..1546246 Geobacter uraniireducens Rf4 5164103 YP_001230084.1 CDS Gura_1310 NC_009483.1 1546246 1547376 D hypothetical protein 1546246..1547376 Geobacter uraniireducens Rf4 5164104 YP_001230085.1 CDS Gura_1311 NC_009483.1 1547440 1547718 D hypothetical protein 1547440..1547718 Geobacter uraniireducens Rf4 5164105 YP_001230086.1 CDS Gura_1312 NC_009483.1 1547830 1549584 D PFAM: extracellular solute-binding protein, family 3; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 1547830..1549584 Geobacter uraniireducens Rf4 5163405 YP_001230087.1 CDS Gura_1313 NC_009483.1 1549581 1550993 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 1549581..1550993 Geobacter uraniireducens Rf4 5163406 YP_001230088.1 CDS Gura_1314 NC_009483.1 1551040 1552296 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(1551040..1552296) Geobacter uraniireducens Rf4 5163407 YP_001230089.1 CDS Gura_1315 NC_009483.1 1552424 1552663 R hypothetical protein complement(1552424..1552663) Geobacter uraniireducens Rf4 5164148 YP_001230090.1 CDS Gura_1316 NC_009483.1 1553192 1554232 D PFAM: Di-haem cytochrome c peroxidase; cytochrome-c peroxidase 1553192..1554232 Geobacter uraniireducens Rf4 5164149 YP_001230091.1 CDS Gura_1317 NC_009483.1 1554323 1554799 D hypothetical protein 1554323..1554799 Geobacter uraniireducens Rf4 5164150 YP_001230092.1 CDS Gura_1318 NC_009483.1 1555055 1555345 R PFAM: plasmid stabilization system; plasmid stabilization system protein complement(1555055..1555345) Geobacter uraniireducens Rf4 5164335 YP_001230093.1 CDS Gura_1319 NC_009483.1 1555352 1555636 R TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein complement(1555352..1555636) Geobacter uraniireducens Rf4 5164336 YP_001230094.1 CDS Gura_1320 NC_009483.1 1556153 1558486 D hypothetical protein 1556153..1558486 Geobacter uraniireducens Rf4 5164337 YP_001230095.1 CDS Gura_1321 NC_009483.1 1558733 1560649 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(1558733..1560649) Geobacter uraniireducens Rf4 5163844 YP_001230096.1 CDS Gura_1322 NC_009483.1 1560767 1562062 R hypothetical protein complement(1560767..1562062) Geobacter uraniireducens Rf4 5163845 YP_001230097.1 CDS Gura_1323 NC_009483.1 1562178 1562921 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(1562178..1562921) Geobacter uraniireducens Rf4 5163846 YP_001230098.1 CDS Gura_1324 NC_009483.1 1563641 1564048 D TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin-like metal-binding protein 1563641..1564048 Geobacter uraniireducens Rf4 5163547 YP_001230099.1 CDS Gura_1325 NC_009483.1 1564229 1566265 D PFAM: UvrD/REP helicase; UvrD/REP helicase 1564229..1566265 Geobacter uraniireducens Rf4 5163548 YP_001230100.1 CDS Gura_1326 NC_009483.1 1566455 1566823 R PFAM: response regulator receiver; response regulator receiver protein complement(1566455..1566823) Geobacter uraniireducens Rf4 5163549 YP_001230101.1 CDS Gura_1327 NC_009483.1 1566942 1567235 R hypothetical protein complement(1566942..1567235) Geobacter uraniireducens Rf4 5163180 YP_001230102.1 CDS Gura_1328 NC_009483.1 1567320 1567844 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 1567320..1567844 Geobacter uraniireducens Rf4 5163181 YP_001230103.1 CDS Gura_1329 NC_009483.1 1567937 1568836 R hypothetical protein complement(1567937..1568836) Geobacter uraniireducens Rf4 5163182 YP_001230104.1 CDS Gura_1330 NC_009483.1 1569007 1569678 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen complement(1569007..1569678) Geobacter uraniireducens Rf4 5162942 YP_001230105.1 CDS Gura_1331 NC_009483.1 1569850 1570365 D PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 1569850..1570365 Geobacter uraniireducens Rf4 5162943 YP_001230106.1 CDS Gura_1332 NC_009483.1 1570509 1571678 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 1570509..1571678 Geobacter uraniireducens Rf4 5162630 YP_001230107.1 CDS Gura_1333 NC_009483.1 1572272 1573675 D PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 1572272..1573675 Geobacter uraniireducens Rf4 5162631 YP_001230108.1 CDS Gura_1334 NC_009483.1 1573791 1574522 R PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator complement(1573791..1574522) Geobacter uraniireducens Rf4 5162632 YP_001230109.1 CDS Gura_1335 NC_009483.1 1574519 1575484 R PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase complement(1574519..1575484) Geobacter uraniireducens Rf4 5162912 YP_001230110.1 CDS Gura_1336 NC_009483.1 1575631 1576035 R PFAM: regulatory protein, MerR; MerR family transcriptional regulator complement(1575631..1576035) Geobacter uraniireducens Rf4 5162913 YP_001230111.1 CDS Gura_1337 NC_009483.1 1576557 1578116 D PFAM: acetyl-CoA hydrolase/transferase; acetyl-CoA hydrolase 1576557..1578116 Geobacter uraniireducens Rf4 5162914 YP_001230112.1 CDS Gura_1338 NC_009483.1 1578120 1578428 D SMART: regulatory protein, IclR; regulatory protein IclR 1578120..1578428 Geobacter uraniireducens Rf4 5166334 YP_001230113.1 CDS Gura_1339 NC_009483.1 1578507 1578815 D PFAM: protein of unknown function DUF485; hypothetical protein 1578507..1578815 Geobacter uraniireducens Rf4 5166335 YP_001230114.1 CDS Gura_1340 NC_009483.1 1578827 1580794 D TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; SSS family solute/sodium (Na+) symporter 1578827..1580794 Geobacter uraniireducens Rf4 5166336 YP_001230115.1 CDS Gura_1341 NC_009483.1 1581224 1581790 D hypothetical protein 1581224..1581790 Geobacter uraniireducens Rf4 5167051 YP_001230116.1 CDS Gura_1342 NC_009483.1 1581908 1585255 D TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: ArgK protein; methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; methylmalonyl-CoA mutase large subunit 1581908..1585255 Geobacter uraniireducens Rf4 5167052 YP_001230117.1 CDS Gura_1343 NC_009483.1 1585381 1586427 D PFAM: thioesterase superfamily protein; thioesterase superfamily protein 1585381..1586427 Geobacter uraniireducens Rf4 5167053 YP_001230118.1 CDS Gura_1344 NC_009483.1 1586664 1587200 D PFAM: nitroreductase; nitroreductase 1586664..1587200 Geobacter uraniireducens Rf4 5163646 YP_001230119.1 CDS Gura_1345 NC_009483.1 1587194 1588363 D PFAM: creatinase; peptidase M24; peptidase M24 1587194..1588363 Geobacter uraniireducens Rf4 5163647 YP_001230120.1 CDS Gura_1346 NC_009483.1 1588840 1590759 D PFAM: asparagine synthase; asparagine synthase 1588840..1590759 Geobacter uraniireducens Rf4 5163648 YP_001230121.1 CDS Gura_1347 NC_009483.1 1591050 1591583 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1591050..1591583 Geobacter uraniireducens Rf4 5165844 YP_001230122.1 CDS Gura_1348 NC_009483.1 1591761 1592378 D PFAM: phage Tail Collar domain protein; phage tail collar domain-containing protein 1591761..1592378 Geobacter uraniireducens Rf4 5165845 YP_001230123.1 CDS Gura_1349 NC_009483.1 1592395 1592940 D PFAM: phage Tail Collar domain protein; phage tail collar domain-containing protein 1592395..1592940 Geobacter uraniireducens Rf4 5165846 YP_001230124.1 CDS Gura_1350 NC_009483.1 1592958 1593491 D PFAM: phage Tail Collar domain protein; phage tail collar domain-containing protein 1592958..1593491 Geobacter uraniireducens Rf4 5166672 YP_001230125.1 CDS Gura_1351 NC_009483.1 1593860 1595782 D PFAM: asparagine synthase; asparagine synthase 1593860..1595782 Geobacter uraniireducens Rf4 5166673 YP_001230126.1 CDS Gura_1352 NC_009483.1 1595772 1596578 D hypothetical protein 1595772..1596578 Geobacter uraniireducens Rf4 5166674 YP_001230127.1 CDS Gura_1353 NC_009483.1 1596575 1597483 D hypothetical protein 1596575..1597483 Geobacter uraniireducens Rf4 5166581 YP_001230128.1 CDS Gura_1354 NC_009483.1 1597476 1598345 D PFAM: sulfotransferase; sulfotransferase 1597476..1598345 Geobacter uraniireducens Rf4 5166582 YP_001230129.1 CDS Gura_1355 NC_009483.1 1598335 1598631 D hypothetical protein 1598335..1598631 Geobacter uraniireducens Rf4 5166583 YP_001230130.1 CDS Gura_1356 NC_009483.1 1598603 1599067 D hypothetical protein 1598603..1599067 Geobacter uraniireducens Rf4 5166914 YP_001230131.1 CDS Gura_1357 NC_009483.1 1599111 1599548 D PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 1599111..1599548 Geobacter uraniireducens Rf4 5166915 YP_001230132.1 CDS Gura_1358 NC_009483.1 1599611 1599895 R SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(1599611..1599895) Geobacter uraniireducens Rf4 5166916 YP_001230133.1 CDS Gura_1359 NC_009483.1 1599899 1600108 R PFAM: protein of unknown function DUF891; hypothetical protein complement(1599899..1600108) Geobacter uraniireducens Rf4 5167031 YP_001230134.1 CDS Gura_1360 NC_009483.1 1600445 1600768 D hypothetical protein 1600445..1600768 Geobacter uraniireducens Rf4 5167032 YP_001230135.1 CDS Gura_1361 NC_009483.1 1600765 1600995 D hypothetical protein 1600765..1600995 Geobacter uraniireducens Rf4 5167033 YP_001230136.1 CDS Gura_1362 NC_009483.1 1601149 1601340 D hypothetical protein 1601149..1601340 Geobacter uraniireducens Rf4 5167040 YP_001230137.1 CDS Gura_1363 NC_009483.1 1601618 1601926 R hypothetical protein complement(1601618..1601926) Geobacter uraniireducens Rf4 5167041 YP_001230138.1 CDS Gura_1364 NC_009483.1 1602836 1604485 R catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase complement(1602836..1604485) Geobacter uraniireducens Rf4 5167042 YP_001230139.1 CDS Gura_1365 NC_009483.1 1604811 1605380 D PFAM: Tellurite resistance protein TehB; Methyltransferase type 11; Methyltransferase type 12; type 12 methyltransferase 1604811..1605380 Geobacter uraniireducens Rf4 5162706 YP_001230140.1 CDS Gura_1366 NC_009483.1 1605407 1606114 R TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; ubiquinone/menaquinone biosynthesis methyltransferase complement(1605407..1606114) Geobacter uraniireducens Rf4 5162707 YP_001230141.1 CDS Gura_1367 NC_009483.1 1606376 1607788 D PFAM: protein of unknown function DUF147; YbbR family protein; hypothetical protein 1606376..1607788 Geobacter uraniireducens Rf4 5162708 YP_001230142.1 CDS Gura_1368 NC_009483.1 1608138 1609178 D PFAM: NLP/P60 protein; Peptidoglycan-binding LysM; NLP/P60 protein 1608138..1609178 Geobacter uraniireducens Rf4 5162858 YP_001230143.1 CDS Gura_1369 NC_009483.1 1609266 1610936 D PFAM: TPR repeat-containing protein; cobalamin B12-binding domain protein; Radical SAM domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Elongator protein 3/MiaB/NifB; Tetratricopeptide domain protein; radical SAM domain-containing protein 1609266..1610936 Geobacter uraniireducens Rf4 5162859 YP_001230144.1 CDS Gura_1370 NC_009483.1 1611160 1611579 R hypothetical protein complement(1611160..1611579) Geobacter uraniireducens Rf4 5162860 YP_001230145.1 CDS Gura_1371 NC_009483.1 1611696 1615010 R PFAM: AsmA family protein; AsmA family protein complement(1611696..1615010) Geobacter uraniireducens Rf4 5162909 YP_001230146.1 CDS Gura_1372 NC_009483.1 1615170 1615529 D PFAM: response regulator receiver; response regulator receiver protein 1615170..1615529 Geobacter uraniireducens Rf4 5162910 YP_001230147.1 CDS Gura_1373 NC_009483.1 1615575 1616441 D hypothetical protein 1615575..1616441 Geobacter uraniireducens Rf4 5162911 YP_001230148.1 CDS Gura_1374 NC_009483.1 1616504 1618744 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(1616504..1618744) Geobacter uraniireducens Rf4 5162952 YP_001230149.1 CDS Gura_1375 NC_009483.1 1618915 1619316 R PFAM: sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(1618915..1619316) Geobacter uraniireducens Rf4 5162953 YP_001230150.1 CDS Gura_1376 NC_009483.1 1619353 1619817 D PFAM: regulatory protein, MarR; MarR family transcriptional regulator 1619353..1619817 Geobacter uraniireducens Rf4 5162954 YP_001230151.1 CDS Gura_1377 NC_009483.1 1620196 1620468 D hypothetical protein 1620196..1620468 Geobacter uraniireducens Rf4 5162973 YP_001230152.1 CDS Gura_1378 NC_009483.1 1620766 1621050 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase 1620766..1621050 Geobacter uraniireducens Rf4 5162974 YP_001230153.1 CDS Gura_1379 NC_009483.1 1621179 1622234 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(1621179..1622234) Geobacter uraniireducens Rf4 5162975 YP_001230154.1 CDS Gura_1380 NC_009483.1 1622639 1623880 R PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein complement(1622639..1623880) Geobacter uraniireducens Rf4 5163018 YP_001230155.1 CDS Gura_1381 NC_009483.1 1624256 1626007 D TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: AAA ATPase; arsenite-activated ATPase ArsA 1624256..1626007 Geobacter uraniireducens Rf4 5163019 YP_001230156.1 CDS Gura_1382 NC_009483.1 1626042 1626413 D PFAM: Arsenical resistance operon trans-acting repressor ArsD; arsenical resistance operon trans-acting repressor ArsD 1626042..1626413 Geobacter uraniireducens Rf4 5163020 YP_001230157.1 CDS Gura_1383 NC_009483.1 1626464 1627156 D hypothetical protein 1626464..1627156 Geobacter uraniireducens Rf4 5163037 YP_001230158.1 CDS Gura_1384 NC_009483.1 1627207 1627866 D PFAM: cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis transmembrane protein 1627207..1627866 Geobacter uraniireducens Rf4 5163038 YP_001230159.1 CDS Gura_1385 NC_009483.1 1627962 1628507 D hypothetical protein 1627962..1628507 Geobacter uraniireducens Rf4 5163039 YP_001230160.1 CDS Gura_1386 NC_009483.1 1628527 1629831 D PFAM: amino acid permease-associated region; amino acid permease-associated protein 1628527..1629831 Geobacter uraniireducens Rf4 5163834 YP_001230161.1 CDS lpxC NC_009483.1 1630150 1631073 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(1630150..1631073) Geobacter uraniireducens Rf4 5163835 YP_001230162.1 CDS Gura_1388 NC_009483.1 1631264 1632949 R PFAM: ABC-1 domain protein; hypothetical protein complement(1631264..1632949) Geobacter uraniireducens Rf4 5163836 YP_001230163.1 CDS Gura_1389 NC_009483.1 1632943 1633260 R hypothetical protein complement(1632943..1633260) Geobacter uraniireducens Rf4 5163841 YP_001230164.1 CDS Gura_1390 NC_009483.1 1633353 1633565 R hypothetical protein complement(1633353..1633565) Geobacter uraniireducens Rf4 5163842 YP_001230165.1 CDS Gura_1391 NC_009483.1 1633579 1634118 R PFAM: protein of unknown function DUF208; hypothetical protein complement(1633579..1634118) Geobacter uraniireducens Rf4 5163843 YP_001230166.1 CDS Gura_1392 NC_009483.1 1634231 1634662 R PFAM: protein of unknown function DUF101; hypothetical protein complement(1634231..1634662) Geobacter uraniireducens Rf4 5163994 YP_001230167.1 CDS Gura_1393 NC_009483.1 1634671 1636128 R PFAM: protein of unknown function UPF0027; hypothetical protein complement(1634671..1636128) Geobacter uraniireducens Rf4 5163995 YP_001230168.1 CDS Gura_1394 NC_009483.1 1636189 1637613 R exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA complement(1636189..1637613) Geobacter uraniireducens Rf4 5163996 YP_001230169.1 CDS Gura_1395 NC_009483.1 1637624 1637893 R hypothetical protein complement(1637624..1637893) Geobacter uraniireducens Rf4 5164196 YP_001230170.1 CDS Gura_1396 NC_009483.1 1637877 1638176 R PFAM: protein of unknown function DUF497; hypothetical protein complement(1637877..1638176) Geobacter uraniireducens Rf4 5164197 YP_001230171.1 CDS Gura_1397 NC_009483.1 1638406 1639791 D PFAM: NLP/P60 protein; NLP/P60 protein 1638406..1639791 Geobacter uraniireducens Rf4 5164198 YP_001230172.1 CDS Gura_1398 NC_009483.1 1640029 1640916 R PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator complement(1640029..1640916) Geobacter uraniireducens Rf4 5164199 YP_001230173.1 CDS Gura_1399 NC_009483.1 1641482 1642690 D PFAM: creatinase; peptidase M24; creatinase 1641482..1642690 Geobacter uraniireducens Rf4 5164200 YP_001230174.1 CDS Gura_1400 NC_009483.1 1642998 1643483 D PFAM: regulatory protein, MerR; MerR family transcriptional regulator 1642998..1643483 Geobacter uraniireducens Rf4 5164201 YP_001230175.1 CDS Gura_1401 NC_009483.1 1643748 1643987 D hypothetical protein 1643748..1643987 Geobacter uraniireducens Rf4 5164511 YP_001230176.1 CDS Gura_1402 NC_009483.1 1643984 1644814 D hypothetical protein 1643984..1644814 Geobacter uraniireducens Rf4 5164512 YP_001230177.1 CDS Gura_1403 NC_009483.1 1645416 1646069 R hypothetical protein complement(1645416..1646069) Geobacter uraniireducens Rf4 5164513 YP_001230178.1 CDS Gura_1404 NC_009483.1 1646187 1646561 R PFAM: PilT protein domain protein; PilT domain-containing protein complement(1646187..1646561) Geobacter uraniireducens Rf4 5164882 YP_001230179.1 CDS Gura_1405 NC_009483.1 1646558 1646764 R TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; AbrB family transcriptional regulator complement(1646558..1646764) Geobacter uraniireducens Rf4 5164883 YP_001230180.1 CDS Gura_1406 NC_009483.1 1647053 1647235 R hypothetical protein complement(1647053..1647235) Geobacter uraniireducens Rf4 5164884 YP_001230181.1 CDS Gura_1407 NC_009483.1 1647265 1648098 R hypothetical protein complement(1647265..1648098) Geobacter uraniireducens Rf4 5165427 YP_001230182.1 CDS Gura_1408 NC_009483.1 1648351 1648812 R hypothetical protein complement(1648351..1648812) Geobacter uraniireducens Rf4 5165428 YP_001230183.1 CDS Gura_1409 NC_009483.1 1649150 1649581 R preprotein translocase subunit SecB-like protein complement(1649150..1649581) Geobacter uraniireducens Rf4 5165455 YP_001230184.1 CDS Gura_1410 NC_009483.1 1649571 1650077 R hypothetical protein complement(1649571..1650077) Geobacter uraniireducens Rf4 5165456 YP_001230185.1 CDS Gura_1411 NC_009483.1 1650103 1650432 R hypothetical protein complement(1650103..1650432) Geobacter uraniireducens Rf4 5165457 YP_001230186.1 CDS Gura_1412 NC_009483.1 1650906 1651631 R PFAM: Chromosomal replication initiator, DnaA; chromosomal replication initiator DnaA complement(1650906..1651631) Geobacter uraniireducens Rf4 5165470 YP_001230187.1 CDS ruvB NC_009483.1 1651634 1652650 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(1651634..1652650) Geobacter uraniireducens Rf4 5165471 YP_001230188.1 CDS ruvA NC_009483.1 1652715 1653314 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(1652715..1653314) Geobacter uraniireducens Rf4 5165472 YP_001230189.1 CDS ruvC NC_009483.1 1653369 1653884 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(1653369..1653884) Geobacter uraniireducens Rf4 5165607 YP_001230190.1 CDS Gura_1416 NC_009483.1 1653943 1654686 R PFAM: protein of unknown function DUF28; hypothetical protein complement(1653943..1654686) Geobacter uraniireducens Rf4 5165608 YP_001230191.1 CDS Gura_1417 NC_009483.1 1654843 1655280 D hypothetical protein 1654843..1655280 Geobacter uraniireducens Rf4 5165609 YP_001230192.1 CDS Gura_1418 NC_009483.1 1655813 1656577 D PFAM: regulatory protein, IclR; regulatory protein IclR 1655813..1656577 Geobacter uraniireducens Rf4 5165613 YP_001230193.1 CDS Gura_1419 NC_009483.1 1656698 1657006 D PFAM: protein of unknown function DUF485; hypothetical protein 1656698..1657006 Geobacter uraniireducens Rf4 5165614 YP_001230194.1 CDS Gura_1420 NC_009483.1 1657023 1659002 D TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; SSS family solute/sodium (Na+) symporter 1657023..1659002 Geobacter uraniireducens Rf4 5165615 YP_001230195.1 CDS Gura_1421 NC_009483.1 1659071 1660300 D PFAM: protein of unknown function DUF294, nucleotidyltransferase putative; hypothetical protein 1659071..1660300 Geobacter uraniireducens Rf4 5165688 YP_001230196.1 CDS Gura_1422 NC_009483.1 1660594 1662561 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; Cache, type 2 domain protein; integral membrane sensor signal transduction histidine kinase 1660594..1662561 Geobacter uraniireducens Rf4 5165689 YP_001230197.1 CDS Gura_1423 NC_009483.1 1662691 1662972 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein 1662691..1662972 Geobacter uraniireducens Rf4 5165690 YP_001230198.1 CDS Gura_1424 NC_009483.1 1662969 1663265 D PFAM: plasmid stabilization system; plasmid stabilization system protein 1662969..1663265 Geobacter uraniireducens Rf4 5166143 YP_001230199.1 CDS Gura_1425 NC_009483.1 1663391 1663717 D hypothetical protein 1663391..1663717 Geobacter uraniireducens Rf4 5166144 YP_001230200.1 CDS Gura_1426 NC_009483.1 1663805 1664305 D hypothetical protein 1663805..1664305 Geobacter uraniireducens Rf4 5166145 YP_001230201.1 CDS Gura_1427 NC_009483.1 1664662 1664799 D hypothetical protein 1664662..1664799 Geobacter uraniireducens Rf4 5166462 YP_001230202.1 CDS Gura_1428 NC_009483.1 1664975 1666357 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 1664975..1666357 Geobacter uraniireducens Rf4 5166463 YP_001230203.1 CDS Gura_1429 NC_009483.1 1666821 1667006 D hypothetical protein 1666821..1667006 Geobacter uraniireducens Rf4 5166464 YP_001230204.1 CDS Gura_1430 NC_009483.1 1667133 1667384 D hypothetical protein 1667133..1667384 Geobacter uraniireducens Rf4 5166540 YP_001230205.1 CDS Gura_1431 NC_009483.1 1667470 1668519 D hypothetical protein 1667470..1668519 Geobacter uraniireducens Rf4 5166541 YP_001230206.1 CDS Gura_1432 NC_009483.1 1668653 1669426 D PFAM: protein of unknown function DUF81; hypothetical protein 1668653..1669426 Geobacter uraniireducens Rf4 5166542 YP_001230207.1 CDS Gura_1433 NC_009483.1 1669492 1669812 R hypothetical protein complement(1669492..1669812) Geobacter uraniireducens Rf4 5166859 YP_001230208.1 CDS Gura_1434 NC_009483.1 1669898 1670569 R hypothetical protein complement(1669898..1670569) Geobacter uraniireducens Rf4 5166860 YP_001230209.1 CDS Gura_1435 NC_009483.1 1670704 1671909 D SAM-dependent methyltransferase-like protein 1670704..1671909 Geobacter uraniireducens Rf4 5166861 YP_001230210.1 CDS Gura_1436 NC_009483.1 1671937 1672140 D PFAM: SlyX family protein; SlyX family protein 1671937..1672140 Geobacter uraniireducens Rf4 5167054 YP_001230211.1 CDS Gura_1437 NC_009483.1 1672500 1673450 D PFAM: aldo/keto reductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; aldo/keto reductase 1672500..1673450 Geobacter uraniireducens Rf4 5167055 YP_001230212.1 CDS Gura_1439 NC_009483.1 1673635 1673880 D hypothetical protein 1673635..1673880 Geobacter uraniireducens Rf4 5163729 YP_001230213.1 CDS Gura_1440 NC_009483.1 1673960 1674556 D hypothetical protein 1673960..1674556 Geobacter uraniireducens Rf4 5163730 YP_001230214.1 CDS Gura_1441 NC_009483.1 1674695 1675108 R hypothetical protein complement(1674695..1675108) Geobacter uraniireducens Rf4 5163731 YP_001230215.1 CDS Gura_1442 NC_009483.1 1675101 1675418 R hypothetical protein complement(1675101..1675418) Geobacter uraniireducens Rf4 5163655 YP_001230216.1 CDS Gura_1443 NC_009483.1 1675651 1675893 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein 1675651..1675893 Geobacter uraniireducens Rf4 5163656 YP_001230217.1 CDS Gura_1444 NC_009483.1 1675887 1676153 D TIGRFAM: addiction module toxin, Txe/YoeB family; addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; Addiction module toxin, Txe/YoeB; addiction module antitoxin 1675887..1676153 Geobacter uraniireducens Rf4 5163657 YP_001230218.1 CDS Gura_1445 NC_009483.1 1676407 1676943 R hypothetical protein complement(1676407..1676943) Geobacter uraniireducens Rf4 5162825 YP_001230219.1 CDS Gura_1446 NC_009483.1 1676963 1677847 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(1676963..1677847) Geobacter uraniireducens Rf4 5162826 YP_001230220.1 CDS Gura_1447 NC_009483.1 1678097 1679125 R PFAM: Porphyromonas-type peptidyl-arginine deiminase; agmatine deiminase complement(1678097..1679125) Geobacter uraniireducens Rf4 5162827 YP_001230221.1 CDS Gura_1448 NC_009483.1 1679543 1680754 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; S-adenosylmethionine synthetase 1679543..1680754 Geobacter uraniireducens Rf4 5163538 YP_001230222.1 CDS Gura_1450 NC_009483.1 1683822 1684646 D PFAM: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 1683822..1684646 Geobacter uraniireducens Rf4 5163540 YP_001230223.1 CDS Gura_1451 NC_009483.1 1684750 1685166 R hypothetical protein complement(1684750..1685166) Geobacter uraniireducens Rf4 5164656 YP_001230224.1 CDS Gura_1452 NC_009483.1 1685258 1685539 D PFAM: protein of unknown function DUF503; hypothetical protein 1685258..1685539 Geobacter uraniireducens Rf4 5164657 YP_001230225.1 CDS Gura_1453 NC_009483.1 1685569 1686147 D PFAM: manganese and iron superoxide dismutase; manganese and iron superoxide dismutase 1685569..1686147 Geobacter uraniireducens Rf4 5164658 YP_001230226.1 CDS Gura_1454 NC_009483.1 1686356 1686859 D TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; PfpI family intracellular peptidase 1686356..1686859 Geobacter uraniireducens Rf4 5163582 YP_001230227.1 CDS Gura_1455 NC_009483.1 1686888 1687298 D hypothetical protein 1686888..1687298 Geobacter uraniireducens Rf4 5163583 YP_001230228.1 CDS Gura_1456 NC_009483.1 1687664 1688881 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 1687664..1688881 Geobacter uraniireducens Rf4 5163584 YP_001230229.1 CDS Gura_1457 NC_009483.1 1688898 1689584 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1688898..1689584 Geobacter uraniireducens Rf4 5167075 YP_001230230.1 CDS Gura_1458 NC_009483.1 1689606 1690763 D PFAM: protein of unknown function DUF214; hypothetical protein 1689606..1690763 Geobacter uraniireducens Rf4 5167076 YP_001230231.1 CDS Gura_1459 NC_009483.1 1690763 1691929 D PFAM: protein of unknown function DUF214; hypothetical protein 1690763..1691929 Geobacter uraniireducens Rf4 5167077 YP_001230232.1 CDS Gura_1460 NC_009483.1 1691970 1692713 D hypothetical protein 1691970..1692713 Geobacter uraniireducens Rf4 5164057 YP_001230233.1 CDS Gura_1461 NC_009483.1 1692734 1693915 D hypothetical protein 1692734..1693915 Geobacter uraniireducens Rf4 5164058 YP_001230234.1 CDS Gura_1462 NC_009483.1 1694032 1695108 D PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; prephenate dehydratase 1694032..1695108 Geobacter uraniireducens Rf4 5164059 YP_001230235.1 CDS Gura_1463 NC_009483.1 1695232 1696092 D PFAM: Prephenate dehydrogenase; prephenate dehydrogenase 1695232..1696092 Geobacter uraniireducens Rf4 5165952 YP_001230236.1 CDS Gura_1464 NC_009483.1 1696123 1697409 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1696123..1697409 Geobacter uraniireducens Rf4 5165953 YP_001230237.1 CDS Gura_1465 NC_009483.1 1697406 1698128 D TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase 1697406..1698128 Geobacter uraniireducens Rf4 5165954 YP_001230238.1 CDS Gura_1466 NC_009483.1 1698125 1698973 D TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase 1698125..1698973 Geobacter uraniireducens Rf4 5163015 YP_001230239.1 CDS rpsA NC_009483.1 1699043 1700797 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1699043..1700797 Geobacter uraniireducens Rf4 5163016 YP_001230240.1 CDS Gura_1468 NC_009483.1 1700862 1701143 D PFAM: histone family protein DNA-binding protein; histone family protein DNA-binding protein 1700862..1701143 Geobacter uraniireducens Rf4 5163017 YP_001230241.1 CDS Gura_1469 NC_009483.1 1701702 1701965 R hypothetical protein complement(1701702..1701965) Geobacter uraniireducens Rf4 5164604 YP_001230242.1 CDS Gura_1470 NC_009483.1 1701975 1702214 D hypothetical protein 1701975..1702214 Geobacter uraniireducens Rf4 5165792 YP_001230243.1 CDS Gura_1471 NC_009483.1 1703268 1704572 D PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 1703268..1704572 Geobacter uraniireducens Rf4 5165793 YP_001230244.1 CDS Gura_1472 NC_009483.1 1705430 1710232 D TIGRFAM: YD repeat protein; YD repeat-containing protein 1705430..1710232 Geobacter uraniireducens Rf4 5165794 YP_001230245.1 CDS Gura_1473 NC_009483.1 1710841 1711944 D hypothetical protein 1710841..1711944 Geobacter uraniireducens Rf4 5164101 YP_001230246.1 CDS Gura_1474 NC_009483.1 1712044 1713195 D hypothetical protein 1712044..1713195 Geobacter uraniireducens Rf4 5164102 YP_001230247.1 CDS Gura_1475 NC_009483.1 1713241 1719000 D PFAM: regulator of chromosome condensation, RCC1; regulator of chromosome condensation, RCC1 1713241..1719000 Geobacter uraniireducens Rf4 5165268 YP_001230248.1 CDS Gura_1476 NC_009483.1 1719553 1719828 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 1719553..1719828 Geobacter uraniireducens Rf4 5165269 YP_001230249.1 CDS Gura_1477 NC_009483.1 1719829 1721154 D PFAM: HipA domain protein; HipA domain-containing protein 1719829..1721154 Geobacter uraniireducens Rf4 5165270 YP_001230250.1 CDS Gura_1478 NC_009483.1 1721663 1721920 D PFAM: SpoVT/AbrB domain protein; transcriptional regulator/antitoxin MazE 1721663..1721920 Geobacter uraniireducens Rf4 5164641 YP_001230251.1 CDS Gura_1479 NC_009483.1 1721914 1722315 D transcriptional modulator of MazE/toxin MazF 1721914..1722315 Geobacter uraniireducens Rf4 5164642 YP_001230252.1 CDS Gura_1480 NC_009483.1 1722764 1725097 D PFAM: N-6 DNA methylase; N-6 DNA methylase 1722764..1725097 Geobacter uraniireducens Rf4 5164643 YP_001230253.1 CDS Gura_1481 NC_009483.1 1725097 1726428 D restriction endonuclease S subunits-like protein 1725097..1726428 Geobacter uraniireducens Rf4 5166247 YP_001230254.1 CDS Gura_1482 NC_009483.1 1726606 1729851 D PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; hypothetical protein 1726606..1729851 Geobacter uraniireducens Rf4 5166248 YP_001230255.1 CDS Gura_1483 NC_009483.1 1730245 1731855 D PFAM: Peptidoglycan-binding domain 1 protein; SMART: AAA ATPase; peptidoglycan binding domain-containing protein 1730245..1731855 Geobacter uraniireducens Rf4 5166249 YP_001230256.1 CDS Gura_1484 NC_009483.1 1731852 1732574 D hypothetical protein 1731852..1732574 Geobacter uraniireducens Rf4 5165670 YP_001230257.1 CDS Gura_1485 NC_009483.1 1732648 1732944 D PFAM: protein of unknown function UPF0153; hypothetical protein 1732648..1732944 Geobacter uraniireducens Rf4 5165671 YP_001230258.1 CDS Gura_1486 NC_009483.1 1733246 1734523 D hypothetical protein 1733246..1734523 Geobacter uraniireducens Rf4 5165672 YP_001230259.1 CDS Gura_1487 NC_009483.1 1734531 1734854 R PFAM: plasmid stabilization system; plasmid stabilization system protein complement(1734531..1734854) Geobacter uraniireducens Rf4 5165177 YP_001230260.1 CDS Gura_1488 NC_009483.1 1734851 1735132 R TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein complement(1734851..1735132) Geobacter uraniireducens Rf4 5165178 YP_001230261.1 CDS Gura_1489 NC_009483.1 1735384 1735725 D hypothetical protein 1735384..1735725 Geobacter uraniireducens Rf4 5165179 YP_001230262.1 CDS Gura_1490 NC_009483.1 1735729 1737063 R TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004-like; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying enzyme complement(1735729..1737063) Geobacter uraniireducens Rf4 5163364 YP_001230263.1 CDS Gura_1491 NC_009483.1 1737105 1738280 R PFAM: transposase, IS4 family protein; transposase, IS4 family protein complement(1737105..1738280) Geobacter uraniireducens Rf4 5163365 YP_001230264.1 CDS mnmA NC_009483.1 1738584 1739711 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(1738584..1739711) Geobacter uraniireducens Rf4 5163366 YP_001230265.1 CDS Gura_1493 NC_009483.1 1740022 1741161 R PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; class V aminotransferase complement(1740022..1741161) Geobacter uraniireducens Rf4 5163431 YP_001230266.1 CDS Gura_1494 NC_009483.1 1741218 1741643 R TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator complement(1741218..1741643) Geobacter uraniireducens Rf4 5163432 YP_001230267.1 CDS Gura_1495 NC_009483.1 1741648 1742325 R TIGRFAM: serine O-acetyltransferase; serine O-acetyltransferase complement(1741648..1742325) Geobacter uraniireducens Rf4 5163433 YP_001230268.1 CDS Gura_1496 NC_009483.1 1742447 1744486 R TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(1742447..1744486) Geobacter uraniireducens Rf4 5164471 YP_001230269.1 CDS Gura_1497 NC_009483.1 1744744 1746051 R hypothetical protein complement(1744744..1746051) Geobacter uraniireducens Rf4 5164472 YP_001230270.1 CDS Gura_1498 NC_009483.1 1746768 1748072 D PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 1746768..1748072 Geobacter uraniireducens Rf4 5164473 YP_001230271.1 CDS miaA NC_009483.1 1748296 1749201 R IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase complement(1748296..1749201) Geobacter uraniireducens Rf4 5167078 YP_001230272.1 CDS Gura_1500 NC_009483.1 1749210 1750544 R TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease complement(1749210..1750544) Geobacter uraniireducens Rf4 5167079 YP_001230273.1 CDS Gura_1501 NC_009483.1 1750949 1751779 R PFAM: protein of unknown function DUF155; hypothetical protein complement(1750949..1751779) Geobacter uraniireducens Rf4 5167080 YP_001230274.1 CDS Gura_1502 NC_009483.1 1751909 1752220 D hypothetical protein 1751909..1752220 Geobacter uraniireducens Rf4 5166410 YP_001230275.1 CDS Gura_1503 NC_009483.1 1752248 1752427 R hypothetical protein complement(1752248..1752427) Geobacter uraniireducens Rf4 5166411 YP_001230276.1 CDS Gura_1504 NC_009483.1 1752873 1755338 D hypothetical protein 1752873..1755338 Geobacter uraniireducens Rf4 5166412 YP_001230277.1 CDS Gura_1505 NC_009483.1 1755301 1756317 D PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase 1755301..1756317 Geobacter uraniireducens Rf4 5165288 YP_001230278.1 CDS Gura_1506 NC_009483.1 1756341 1757393 D hypothetical protein 1756341..1757393 Geobacter uraniireducens Rf4 5165289 YP_001230279.1 CDS Gura_1507 NC_009483.1 1757580 1758611 R TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein, family 1; phosphate ABC transporter periplasmic phosphate-binding protein complement(1757580..1758611) Geobacter uraniireducens Rf4 5165290 YP_001230280.1 CDS Gura_1508 NC_009483.1 1759519 1760823 D PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 1759519..1760823 Geobacter uraniireducens Rf4 5164565 YP_001230281.1 CDS Gura_1509 NC_009483.1 1761045 1762076 R TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein, family 1; phosphate ABC transporter periplasmic phosphate-binding protein complement(1761045..1762076) Geobacter uraniireducens Rf4 5164566 YP_001230282.1 CDS Gura_1510 NC_009483.1 1762145 1763572 R PFAM: EAL domain protein; diguanylate phosphodiesterase complement(1762145..1763572) Geobacter uraniireducens Rf4 5164567 YP_001230283.1 CDS Gura_1511 NC_009483.1 1763612 1763926 R hypothetical protein complement(1763612..1763926) Geobacter uraniireducens Rf4 5165967 YP_001230284.1 CDS Gura_1512 NC_009483.1 1763898 1764899 R hypothetical protein complement(1763898..1764899) Geobacter uraniireducens Rf4 5165968 YP_001230285.1 CDS Gura_1513 NC_009483.1 1764917 1766110 R PFAM: CBS domain containing protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; stage II sporulation E family protein complement(1764917..1766110) Geobacter uraniireducens Rf4 5165969 YP_001230286.1 CDS Gura_1514 NC_009483.1 1766291 1766962 R TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; phosphate uptake regulator PhoU complement(1766291..1766962) Geobacter uraniireducens Rf4 5163940 YP_001230287.1 CDS Gura_1515 NC_009483.1 1767109 1767867 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein complement(1767109..1767867) Geobacter uraniireducens Rf4 5163941 YP_001230288.1 CDS Gura_1516 NC_009483.1 1768110 1768952 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter inner membrane protein PstA complement(1768110..1768952) Geobacter uraniireducens Rf4 5163942 YP_001230289.1 CDS Gura_1517 NC_009483.1 1768949 1769923 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease complement(1768949..1769923) Geobacter uraniireducens Rf4 5166634 YP_001230290.1 CDS Gura_1518 NC_009483.1 1770033 1771061 R TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein, family 1; phosphate ABC transporter periplasmic phosphate-binding protein complement(1770033..1771061) Geobacter uraniireducens Rf4 5166635 YP_001230291.1 CDS Gura_1519 NC_009483.1 1771239 1771676 R hypothetical protein complement(1771239..1771676) Geobacter uraniireducens Rf4 5166636 YP_001230292.1 CDS Gura_1520 NC_009483.1 1771829 1772437 D PFAM: protein of unknown function DUF502; hypothetical protein 1771829..1772437 Geobacter uraniireducens Rf4 5166965 YP_001230293.1 CDS Gura_1521 NC_009483.1 1772563 1773834 R molecular chaperone-like protein complement(1772563..1773834) Geobacter uraniireducens Rf4 5166966 YP_001230294.1 CDS Gura_1522 NC_009483.1 1774275 1774745 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1774275..1774745 Geobacter uraniireducens Rf4 5166967 YP_001230295.1 CDS Gura_1523 NC_009483.1 1774839 1775330 D PFAM: YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated domain-containing protein 1774839..1775330 Geobacter uraniireducens Rf4 5166935 YP_001230296.1 CDS Gura_1525 NC_009483.1 1775746 1776312 D hypothetical protein 1775746..1776312 Geobacter uraniireducens Rf4 5166937 YP_001230297.1 CDS Gura_1526 NC_009483.1 1776516 1777046 D PFAM: adenylate cyclase; adenylate cyclase 1776516..1777046 Geobacter uraniireducens Rf4 5165988 YP_001230298.1 CDS Gura_1527 NC_009483.1 1777131 1777883 D PFAM: protein of unknown function DUF169; hypothetical protein 1777131..1777883 Geobacter uraniireducens Rf4 5165989 YP_001230299.1 CDS Gura_1528 NC_009483.1 1777945 1778559 D transglutaminase 1777945..1778559 Geobacter uraniireducens Rf4 5165990 YP_001230300.1 CDS Gura_1529 NC_009483.1 1778651 1779499 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1778651..1779499 Geobacter uraniireducens Rf4 5163550 YP_001230301.1 CDS Gura_1530 NC_009483.1 1779601 1780101 D TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8, signal peptidase II; lipoprotein signal peptidase 1779601..1780101 Geobacter uraniireducens Rf4 5163551 YP_001230302.1 CDS Gura_1531 NC_009483.1 1780297 1780587 D PFAM: protein of unknown function DUF156; hypothetical protein 1780297..1780587 Geobacter uraniireducens Rf4 5163552 YP_001230303.1 CDS Gura_1532 NC_009483.1 1780783 1783176 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; heavy metal translocating P-type ATPase 1780783..1783176 Geobacter uraniireducens Rf4 5163753 YP_001230304.1 CDS Gura_1533 NC_009483.1 1783654 1784622 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(1783654..1784622) Geobacter uraniireducens Rf4 5163754 YP_001230305.1 CDS Gura_1534 NC_009483.1 1784647 1785615 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase complement(1784647..1785615) Geobacter uraniireducens Rf4 5163755 YP_001230306.1 CDS Gura_1535 NC_009483.1 1785603 1786664 R hypothetical protein complement(1785603..1786664) Geobacter uraniireducens Rf4 5165300 YP_001230307.1 CDS Gura_1536 NC_009483.1 1787349 1788131 R PFAM: short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(1787349..1788131) Geobacter uraniireducens Rf4 5165301 YP_001230308.1 CDS Gura_1537 NC_009483.1 1788572 1789762 R hypothetical protein complement(1788572..1789762) Geobacter uraniireducens Rf4 5165302 YP_001230309.1 CDS Gura_1538 NC_009483.1 1789759 1791000 R PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein complement(1789759..1791000) Geobacter uraniireducens Rf4 5165658 YP_001230310.1 CDS Gura_1539 NC_009483.1 1791041 1794151 R TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; putative CoA-substrate-specific enzyme activase complement(1791041..1794151) Geobacter uraniireducens Rf4 5165659 YP_001230311.1 CDS Gura_1540 NC_009483.1 1794393 1794917 D PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1794393..1794917 Geobacter uraniireducens Rf4 5165660 YP_001230312.1 CDS Gura_1541 NC_009483.1 1794998 1795954 D PFAM: Integrase, catalytic region; integrase catalytic subunit 1794998..1795954 Geobacter uraniireducens Rf4 5164582 YP_001230313.1 CDS Gura_1542 NC_009483.1 1795936 1796334 R hypothetical protein complement(1795936..1796334) Geobacter uraniireducens Rf4 5164583 YP_001230314.1 CDS Gura_1543 NC_009483.1 1796437 1797678 D PFAM: ATP-binding region, ATPase domain protein; putative signal transduction histidine kinase 1796437..1797678 Geobacter uraniireducens Rf4 5164584 YP_001230315.1 CDS Gura_1544 NC_009483.1 1797685 1798410 D PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator 1797685..1798410 Geobacter uraniireducens Rf4 5162633 YP_001230316.1 CDS Gura_1545 NC_009483.1 1798446 1799828 R PFAM: transposase, IS4 family protein; transposase, IS4 family protein complement(1798446..1799828) Geobacter uraniireducens Rf4 5162634 YP_001230317.1 CDS Gura_1546 NC_009483.1 1800049 1800438 R hypothetical protein complement(1800049..1800438) Geobacter uraniireducens Rf4 5162635 YP_001230318.1 CDS Gura_1547 NC_009483.1 1800472 1802034 R PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; response regulator receiver sensor signal transduction histidine kinase complement(1800472..1802034) Geobacter uraniireducens Rf4 5163393 YP_001230319.1 CDS Gura_1548 NC_009483.1 1802047 1802421 R PFAM: response regulator receiver; response regulator receiver protein complement(1802047..1802421) Geobacter uraniireducens Rf4 5163394 YP_001230320.1 CDS Gura_1549 NC_009483.1 1802418 1804916 R TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase complement(1802418..1804916) Geobacter uraniireducens Rf4 5163395 YP_001230321.1 CDS Gura_1550 NC_009483.1 1805073 1806743 R TIGRFAM: PAS sensor protein; PFAM: histidine kinase, HAMP region domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; putative PAS/PAC sensor protein complement(1805073..1806743) Geobacter uraniireducens Rf4 5162787 YP_001230322.1 CDS Gura_1551 NC_009483.1 1806747 1807400 R hypothetical protein complement(1806747..1807400) Geobacter uraniireducens Rf4 5162788 YP_001230323.1 CDS Gura_1552 NC_009483.1 1807403 1809598 R PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(1807403..1809598) Geobacter uraniireducens Rf4 5162789 YP_001230324.1 CDS Gura_1554 NC_009483.1 1810043 1810516 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1810043..1810516 Geobacter uraniireducens Rf4 5162662 YP_001230325.1 CDS Gura_1555 NC_009483.1 1810513 1810986 D PFAM: regulatory protein, MarR; MarR family transcriptional regulator 1810513..1810986 Geobacter uraniireducens Rf4 5162663 YP_001230326.1 CDS Gura_1556 NC_009483.1 1811025 1811723 D hypothetical protein 1811025..1811723 Geobacter uraniireducens Rf4 5163466 YP_001230327.1 CDS Gura_1558 NC_009483.1 1812138 1812737 D hypothetical protein 1812138..1812737 Geobacter uraniireducens Rf4 5163468 YP_001230328.1 CDS Gura_1559 NC_009483.1 1813381 1814550 D PFAM: Rhodanese domain protein; rhodanese domain-containing protein 1813381..1814550 Geobacter uraniireducens Rf4 5163694 YP_001230329.1 CDS Gura_1560 NC_009483.1 1814807 1815772 D PFAM: Rhodanese domain protein; rhodanese domain-containing protein 1814807..1815772 Geobacter uraniireducens Rf4 5163695 YP_001230330.1 CDS Gura_1561 NC_009483.1 1815864 1816703 D hypothetical protein 1815864..1816703 Geobacter uraniireducens Rf4 5163696 YP_001230331.1 CDS Gura_1562 NC_009483.1 1816836 1818707 D PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 1816836..1818707 Geobacter uraniireducens Rf4 5163505 YP_001230332.1 CDS Gura_1563 NC_009483.1 1818704 1819462 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 1818704..1819462 Geobacter uraniireducens Rf4 5163506 YP_001230333.1 CDS Gura_1564 NC_009483.1 1819477 1820367 D PFAM: Rhodanese domain protein; rhodanese domain-containing protein 1819477..1820367 Geobacter uraniireducens Rf4 5163507 YP_001230334.1 CDS Gura_1565 NC_009483.1 1820477 1820992 D hypothetical protein 1820477..1820992 Geobacter uraniireducens Rf4 5163741 YP_001230335.1 CDS Gura_1566 NC_009483.1 1820992 1822017 D PFAM: Radical SAM domain protein; radical SAM domain-containing protein 1820992..1822017 Geobacter uraniireducens Rf4 5163742 YP_001230336.1 CDS Gura_1567 NC_009483.1 1822002 1823480 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 1822002..1823480 Geobacter uraniireducens Rf4 5163743 YP_001230337.1 CDS Gura_1568 NC_009483.1 1823535 1825025 R hypothetical protein complement(1823535..1825025) Geobacter uraniireducens Rf4 5163799 YP_001230338.1 CDS Gura_1569 NC_009483.1 1825307 1826602 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1825307..1826602 Geobacter uraniireducens Rf4 5163800 YP_001230339.1 CDS Gura_1570 NC_009483.1 1826683 1828128 R catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent; glyceraldehyde-3-phosphate dehydrogenase complement(1826683..1828128) Geobacter uraniireducens Rf4 5163801 YP_001230340.1 CDS Gura_1571 NC_009483.1 1828496 1830274 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(1828496..1830274) Geobacter uraniireducens Rf4 5163910 YP_001230341.1 CDS Gura_1572 NC_009483.1 1830274 1830951 R PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator complement(1830274..1830951) Geobacter uraniireducens Rf4 5163911 YP_001230342.1 CDS Gura_1573 NC_009483.1 1831573 1833231 D activates fatty acids by binding to coenzyme A; AMP-binding protein 1831573..1833231 Geobacter uraniireducens Rf4 5163912 YP_001230343.1 CDS Gura_1574 NC_009483.1 1833299 1833445 D hypothetical protein 1833299..1833445 Geobacter uraniireducens Rf4 5163946 YP_001230344.1 CDS Gura_1575 NC_009483.1 1833464 1834654 D PFAM: creatinase; peptidase M24; creatinase 1833464..1834654 Geobacter uraniireducens Rf4 5163947 YP_001230345.1 CDS Gura_1576 NC_009483.1 1834936 1836261 D PFAM: Citrate synthase; type I citrate synthase 1834936..1836261 Geobacter uraniireducens Rf4 5163948 YP_001230346.1 CDS Gura_1577 NC_009483.1 1836534 1837091 R PFAM: AMMECR1 domain protein; AMMECR1 domain-containing protein complement(1836534..1837091) Geobacter uraniireducens Rf4 5164241 YP_001230347.1 CDS Gura_1578 NC_009483.1 1837186 1838613 D PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase 1837186..1838613 Geobacter uraniireducens Rf4 5164242 YP_001230348.1 CDS Gura_1579 NC_009483.1 1838805 1838999 D hypothetical protein 1838805..1838999 Geobacter uraniireducens Rf4 5164243 YP_001230349.1 CDS ndk NC_009483.1 1839158 1839571 D catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1839158..1839571 Geobacter uraniireducens Rf4 5164553 YP_001230350.1 CDS Gura_1581 NC_009483.1 1839634 1840665 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1839634..1840665 Geobacter uraniireducens Rf4 5164554 YP_001230351.1 CDS Gura_1582 NC_009483.1 1840701 1841564 D TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine phosphorylase, family 2; methylthioadenosine phosphorylase 1840701..1841564 Geobacter uraniireducens Rf4 5164555 YP_001230352.1 CDS Gura_1583 NC_009483.1 1841598 1842497 D PFAM: protein of unknown function DUF815; hypothetical protein 1841598..1842497 Geobacter uraniireducens Rf4 5163126 YP_001230353.1 CDS Gura_1584 NC_009483.1 1842986 1844272 R transposase complement(1842986..1844272) Geobacter uraniireducens Rf4 5163127 YP_001230354.1 CDS Gura_1585 NC_009483.1 1844987 1845613 D phospholipid N-methyltransferase-like protein 1844987..1845613 Geobacter uraniireducens Rf4 5163128 YP_001230355.1 CDS Gura_1586 NC_009483.1 1845642 1845947 R hypothetical protein complement(1845642..1845947) Geobacter uraniireducens Rf4 5164323 YP_001230356.1 CDS Gura_1587 NC_009483.1 1845968 1846183 R hypothetical protein complement(1845968..1846183) Geobacter uraniireducens Rf4 5164324 YP_001230357.1 CDS Gura_1588 NC_009483.1 1846338 1847606 R PFAM: membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein complement(1846338..1847606) Geobacter uraniireducens Rf4 5164325 YP_001230358.1 CDS Gura_1589 NC_009483.1 1847834 1848067 R hypothetical protein complement(1847834..1848067) Geobacter uraniireducens Rf4 5164356 YP_001230359.1 CDS Gura_1590 NC_009483.1 1848130 1849941 D PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1848130..1849941 Geobacter uraniireducens Rf4 5164357 YP_001230360.1 CDS Gura_1591 NC_009483.1 1849977 1852364 D PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 1849977..1852364 Geobacter uraniireducens Rf4 5164358 YP_001230361.1 CDS Gura_1592 NC_009483.1 1852502 1853674 D TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 1852502..1853674 Geobacter uraniireducens Rf4 5164468 YP_001230362.1 CDS Gura_1593 NC_009483.1 1853707 1855485 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein 1853707..1855485 Geobacter uraniireducens Rf4 5164469 YP_001230363.1 CDS Gura_1594 NC_009483.1 1855561 1856502 D PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 1855561..1856502 Geobacter uraniireducens Rf4 5164470 YP_001230364.1 CDS Gura_1595 NC_009483.1 1856556 1858559 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase 1856556..1858559 Geobacter uraniireducens Rf4 5164859 YP_001230365.1 CDS Gura_1596 NC_009483.1 1858605 1859162 D hypothetical protein 1858605..1859162 Geobacter uraniireducens Rf4 5164860 YP_001230366.1 CDS Gura_1597 NC_009483.1 1859252 1860076 D PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1859252..1860076 Geobacter uraniireducens Rf4 5164861 YP_001230367.1 CDS Gura_1598 NC_009483.1 1860111 1860896 D PFAM: Enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1860111..1860896 Geobacter uraniireducens Rf4 5164927 YP_001230368.1 CDS Gura_1599 NC_009483.1 1861132 1861527 R PFAM: regulatory protein, MerR; MerR family transcriptional regulator complement(1861132..1861527) Geobacter uraniireducens Rf4 5164928 YP_001230369.1 CDS Gura_1600 NC_009483.1 1861697 1863682 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 1861697..1863682 Geobacter uraniireducens Rf4 5164929 YP_001230370.1 CDS Gura_1601 NC_009483.1 1863721 1864497 D PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta 1863721..1864497 Geobacter uraniireducens Rf4 5165226 YP_001230371.1 CDS Gura_1602 NC_009483.1 1864507 1865421 D PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 1864507..1865421 Geobacter uraniireducens Rf4 5165227 YP_001230372.1 CDS Gura_1603 NC_009483.1 1865707 1866714 D PFAM: electron transfer flavoprotein beta-subunit; protein of unknown function DUF224, cysteine-rich region domain protein; electron transfer flavoprotein subunit beta 1865707..1866714 Geobacter uraniireducens Rf4 5165228 YP_001230373.1 CDS Gura_1604 NC_009483.1 1866734 1867567 R PFAM: GTP-binding protein, HSR1-related; HSR1-like GTP-binding protein complement(1866734..1867567) Geobacter uraniireducens Rf4 5164856 YP_001230374.1 CDS Gura_1605 NC_009483.1 1867800 1868387 D PFAM: pseudouridine synthase; pseudouridine synthase 1867800..1868387 Geobacter uraniireducens Rf4 5164857 YP_001230375.1 CDS Gura_1606 NC_009483.1 1868795 1869622 D PFAM: protein of unknown function RIO1; hypothetical protein 1868795..1869622 Geobacter uraniireducens Rf4 5164858 YP_001230376.1 CDS Gura_1607 NC_009483.1 1869657 1870739 D TIGRFAM: alanine dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; alanine dehydrogenase/PNT domain protein; alanine dehydrogenase 1869657..1870739 Geobacter uraniireducens Rf4 5165410 YP_001230377.1 CDS Gura_1608 NC_009483.1 1871163 1872917 D Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 1871163..1872917 Geobacter uraniireducens Rf4 5165411 YP_001230378.1 CDS Gura_1609 NC_009483.1 1873055 1874053 D PFAM: dehydrogenase, E1 component; pyruvate dehydrogenase 1873055..1874053 Geobacter uraniireducens Rf4 5165412 YP_001230379.1 CDS Gura_1610 NC_009483.1 1874050 1875051 D PFAM: Transketolase, central region; Transketolase domain protein; transketolase, central region 1874050..1875051 Geobacter uraniireducens Rf4 5165383 YP_001230380.1 CDS Gura_1611 NC_009483.1 1875044 1876255 D PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; branched-chain alpha-keto acid dehydrogenase subunit E2 1875044..1876255 Geobacter uraniireducens Rf4 5165384 YP_001230381.1 CDS Gura_1612 NC_009483.1 1876252 1876497 D hypothetical protein 1876252..1876497 Geobacter uraniireducens Rf4 5165385 YP_001230382.1 CDS Gura_1613 NC_009483.1 1876537 1876902 D hypothetical protein 1876537..1876902 Geobacter uraniireducens Rf4 5165582 YP_001230383.1 CDS Gura_1614 NC_009483.1 1877288 1877662 D hypothetical protein 1877288..1877662 Geobacter uraniireducens Rf4 5165583 YP_001230384.1 CDS Gura_1615 NC_009483.1 1878056 1878313 D PFAM: RNP-1 like RNA-binding protein; RNP-1 like RNA-binding protein 1878056..1878313 Geobacter uraniireducens Rf4 5165584 YP_001230385.1 CDS Gura_1616 NC_009483.1 1878310 1878969 D TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 1878310..1878969 Geobacter uraniireducens Rf4 5165736 YP_001230386.1 CDS Gura_1617 NC_009483.1 1879029 1879241 R hypothetical protein complement(1879029..1879241) Geobacter uraniireducens Rf4 5165737 YP_001230387.1 CDS Gura_1619 NC_009483.1 1879455 1880315 R PFAM: Abortive infection protein; abortive infection protein complement(1879455..1880315) Geobacter uraniireducens Rf4 5164980 YP_001230388.1 CDS Gura_1620 NC_009483.1 1880312 1881253 R PFAM: protein of unknown function DUF1568; SMART: Chromosomal replication initiator, DnaA C-terminal domain; hypothetical protein complement(1880312..1881253) Geobacter uraniireducens Rf4 5164981 YP_001230389.1 CDS Gura_1621 NC_009483.1 1881920 1882171 R hypothetical protein complement(1881920..1882171) Geobacter uraniireducens Rf4 5164982 YP_001230390.1 CDS Gura_1622 NC_009483.1 1882186 1882998 R PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; IstB ATP binding domain-containing protein complement(1882186..1882998) Geobacter uraniireducens Rf4 5165703 YP_001230391.1 CDS Gura_1623 NC_009483.1 1882988 1884436 R PFAM: Integrase, catalytic region; integrase catalytic subunit complement(1882988..1884436) Geobacter uraniireducens Rf4 5165704 YP_001230392.1 CDS Gura_1624 NC_009483.1 1884647 1885333 R PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; dipeptidyl-peptidase IV complement(1884647..1885333) Geobacter uraniireducens Rf4 5165705 YP_001230393.1 CDS Gura_1625 NC_009483.1 1886105 1888012 R PFAM: sulfatase; sulfatase complement(1886105..1888012) Geobacter uraniireducens Rf4 5166561 YP_001230394.1 CDS Gura_1626 NC_009483.1 1888493 1889365 D PFAM: diacylglycerol kinase, catalytic region; diacylglycerol kinase catalytic subunit 1888493..1889365 Geobacter uraniireducens Rf4 5166562 YP_001230395.1 CDS Gura_1627 NC_009483.1 1889408 1889953 R hypothetical protein complement(1889408..1889953) Geobacter uraniireducens Rf4 5166563 YP_001230396.1 CDS Gura_1628 NC_009483.1 1890058 1891368 R hypothetical protein complement(1890058..1891368) Geobacter uraniireducens Rf4 5166477 YP_001230397.1 CDS Gura_1629 NC_009483.1 1891365 1892513 R hypothetical protein complement(1891365..1892513) Geobacter uraniireducens Rf4 5166478 YP_001230398.1 CDS Gura_1630 NC_009483.1 1892562 1893194 R hypothetical protein complement(1892562..1893194) Geobacter uraniireducens Rf4 5166479 YP_001230399.1 CDS Gura_1631 NC_009483.1 1893563 1894030 D TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; bacterioferritin 1893563..1894030 Geobacter uraniireducens Rf4 5164459 YP_001230400.1 CDS Gura_1632 NC_009483.1 1894402 1895745 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase 1894402..1895745 Geobacter uraniireducens Rf4 5164460 YP_001230401.1 CDS Gura_1633 NC_009483.1 1895882 1897177 D PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; cyclopropane-fatty-acyl-phospholipid synthase 1895882..1897177 Geobacter uraniireducens Rf4 5164461 YP_001230402.1 CDS Gura_1634 NC_009483.1 1897228 1898136 R PFAM: pentapeptide repeat protein; pentapeptide repeat-containing protein complement(1897228..1898136) Geobacter uraniireducens Rf4 5163895 YP_001230403.1 CDS Gura_1635 NC_009483.1 1898527 1899300 D PFAM: protein of unknown function DUF500; hypothetical protein 1898527..1899300 Geobacter uraniireducens Rf4 5163896 YP_001230404.1 CDS Gura_1636 NC_009483.1 1899297 1901363 D PFAM: peptidase M1, membrane alanine aminopeptidase; peptidase M1, membrane alanine aminopeptidase 1899297..1901363 Geobacter uraniireducens Rf4 5163897 YP_001230405.1 CDS Gura_1637 NC_009483.1 1901551 1902384 D PFAM: Rhomboid family protein; rhomboid family protein 1901551..1902384 Geobacter uraniireducens Rf4 5166763 YP_001230406.1 CDS Gura_1638 NC_009483.1 1902494 1902883 D hypothetical protein 1902494..1902883 Geobacter uraniireducens Rf4 5166764 YP_001230407.1 CDS Gura_1639 NC_009483.1 1902990 1903715 R hypothetical protein complement(1902990..1903715) Geobacter uraniireducens Rf4 5166765 YP_001230408.1 CDS Gura_1640 NC_009483.1 1903885 1905123 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; major facilitator transporter 1903885..1905123 Geobacter uraniireducens Rf4 5163399 YP_001230409.1 CDS Gura_1641 NC_009483.1 1905442 1905828 D PFAM: response regulator receiver; response regulator receiver protein 1905442..1905828 Geobacter uraniireducens Rf4 5163400 YP_001230410.1 CDS Gura_1642 NC_009483.1 1906005 1906160 D hypothetical protein 1906005..1906160 Geobacter uraniireducens Rf4 5163401 YP_001230411.1 CDS Gura_1643 NC_009483.1 1906335 1907207 R PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein complement(1906335..1907207) Geobacter uraniireducens Rf4 5162834 YP_001230412.1 CDS Gura_1644 NC_009483.1 1907482 1908366 R PFAM: protein of unknown function DUF815; hypothetical protein complement(1907482..1908366) Geobacter uraniireducens Rf4 5162835 YP_001230413.1 CDS Gura_1645 NC_009483.1 1908809 1909009 R hypothetical protein complement(1908809..1909009) Geobacter uraniireducens Rf4 5162836 YP_001230414.1 CDS Gura_1646 NC_009483.1 1909287 1910060 R hypothetical protein complement(1909287..1910060) Geobacter uraniireducens Rf4 5162927 YP_001230415.1 CDS Gura_1647 NC_009483.1 1910243 1910425 D hypothetical protein 1910243..1910425 Geobacter uraniireducens Rf4 5162928 YP_001230416.1 CDS Gura_1648 NC_009483.1 1910460 1910990 R PFAM: PEBP family protein; PEBP family protein complement(1910460..1910990) Geobacter uraniireducens Rf4 5162929 YP_001230417.1 CDS Gura_1649 NC_009483.1 1911448 1911756 R hypothetical protein complement(1911448..1911756) Geobacter uraniireducens Rf4 5163499 YP_001230418.1 CDS Gura_1650 NC_009483.1 1911911 1912501 R PFAM: regulatory protein, TetR; TetR family transcriptional regulator complement(1911911..1912501) Geobacter uraniireducens Rf4 5163500 YP_001230419.1 CDS Gura_1651 NC_009483.1 1912772 1914397 R TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta complement(1912772..1914397) Geobacter uraniireducens Rf4 5163501 YP_001230420.1 CDS Gura_1652 NC_009483.1 1914771 1916075 D hypothetical protein 1914771..1916075 Geobacter uraniireducens Rf4 5163472 YP_001230421.1 CDS Gura_1653 NC_009483.1 1916155 1917114 D hypothetical protein 1916155..1917114 Geobacter uraniireducens Rf4 5163473 YP_001230422.1 CDS Gura_1654 NC_009483.1 1917166 1918083 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 1917166..1918083 Geobacter uraniireducens Rf4 5163474 YP_001230423.1 CDS Gura_1655 NC_009483.1 1918480 1919103 D PFAM: regulatory protein, TetR; TetR family transcriptional regulator 1918480..1919103 Geobacter uraniireducens Rf4 5163629 YP_001230424.1 CDS Gura_1656 NC_009483.1 1919093 1920550 D PFAM: ABC-1 domain protein; hypothetical protein 1919093..1920550 Geobacter uraniireducens Rf4 5163630 YP_001230425.1 CDS Gura_1657 NC_009483.1 1920594 1921370 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1920594..1921370 Geobacter uraniireducens Rf4 5163631 YP_001230426.1 CDS Gura_1658 NC_009483.1 1921367 1923919 D PFAM: protein of unknown function DUF214; hypothetical protein 1921367..1923919 Geobacter uraniireducens Rf4 5163907 YP_001230427.1 CDS Gura_1659 NC_009483.1 1924068 1924880 D hypothetical protein 1924068..1924880 Geobacter uraniireducens Rf4 5163908 YP_001230428.1 CDS Gura_1660 NC_009483.1 1924877 1926124 D hypothetical protein 1924877..1926124 Geobacter uraniireducens Rf4 5163909 YP_001230429.1 CDS Gura_1661 NC_009483.1 1926200 1926820 D hypothetical protein 1926200..1926820 Geobacter uraniireducens Rf4 5163802 YP_001230430.1 CDS Gura_1662 NC_009483.1 1926861 1927136 D hypothetical protein 1926861..1927136 Geobacter uraniireducens Rf4 5163803 YP_001230431.1 CDS Gura_1663 NC_009483.1 1927149 1927385 R hypothetical protein complement(1927149..1927385) Geobacter uraniireducens Rf4 5163804 YP_001230432.1 CDS Gura_1664 NC_009483.1 1927562 1929295 R PFAM: PHP C-terminal domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding, class 1; phosphotransferase domain-containing protein complement(1927562..1929295) Geobacter uraniireducens Rf4 5164077 YP_001230433.1 CDS Gura_1665 NC_009483.1 1929420 1930451 D PFAM: RNA 3'-terminal phosphate cyclase; RNA 3'-terminal phosphate cyclase, insert region; RNA-3'-phosphate cyclase 1929420..1930451 Geobacter uraniireducens Rf4 5164078 YP_001230434.1 CDS Gura_1666 NC_009483.1 1930681 1932780 R hypothetical protein complement(1930681..1932780) Geobacter uraniireducens Rf4 5164079 YP_001230435.1 CDS Gura_1667 NC_009483.1 1932911 1934383 R hypothetical protein complement(1932911..1934383) Geobacter uraniireducens Rf4 5164142 YP_001230436.1 CDS Gura_1668 NC_009483.1 1934620 1935906 R transposase complement(1934620..1935906) Geobacter uraniireducens Rf4 5164143 YP_001230437.1 CDS Gura_1669 NC_009483.1 1936486 1937529 D PFAM: polysaccharide export protein; polysaccharide export protein 1936486..1937529 Geobacter uraniireducens Rf4 5164144 YP_001230438.1 CDS Gura_1670 NC_009483.1 1937601 1939973 D PFAM: lipopolysaccharide biosynthesis protein; non-specific protein-tyrosine kinase 1937601..1939973 Geobacter uraniireducens Rf4 5164172 YP_001230439.1 CDS Gura_1671 NC_009483.1 1940289 1941095 D capsular polysaccharide biosynthesis protein-like protein 1940289..1941095 Geobacter uraniireducens Rf4 5164173 YP_001230440.1 CDS Gura_1672 NC_009483.1 1941222 1942262 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; polysaccharide biosynthesis protein CapD 1941222..1942262 Geobacter uraniireducens Rf4 5164174 YP_001230441.1 CDS Gura_1673 NC_009483.1 1942259 1943566 D PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase, NAD-binding; UDP-glucose/GDP-mannose dehydrogenase 1942259..1943566 Geobacter uraniireducens Rf4 5164353 YP_001230442.1 CDS Gura_1674 NC_009483.1 1943764 1944603 D PFAM: ABC-2 type transporter; ABC-2 type transporter 1943764..1944603 Geobacter uraniireducens Rf4 5164354 YP_001230443.1 CDS Gura_1675 NC_009483.1 1944665 1945927 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1944665..1945927 Geobacter uraniireducens Rf4 5164355 YP_001230444.1 CDS Gura_1676 NC_009483.1 1945920 1946717 D hypothetical protein 1945920..1946717 Geobacter uraniireducens Rf4 5164282 YP_001230445.1 CDS Gura_1677 NC_009483.1 1946743 1947753 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 1946743..1947753 Geobacter uraniireducens Rf4 5164283 YP_001230446.1 CDS Gura_1678 NC_009483.1 1947755 1948483 D PFAM: Methyltransferase type 11; type 11 methyltransferase 1947755..1948483 Geobacter uraniireducens Rf4 5164284 YP_001230447.1 CDS Gura_1679 NC_009483.1 1948637 1949524 D PFAM: glycosyl transferase, family 11; glycosyl transferase family protein 1948637..1949524 Geobacter uraniireducens Rf4 5164381 YP_001230448.1 CDS Gura_1680 NC_009483.1 1949539 1950147 D hypothetical protein 1949539..1950147 Geobacter uraniireducens Rf4 5164382 YP_001230449.1 CDS Gura_1681 NC_009483.1 1950365 1951756 D hypothetical protein 1950365..1951756 Geobacter uraniireducens Rf4 5164383 YP_001230450.1 CDS Gura_1682 NC_009483.1 1951821 1952918 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 1951821..1952918 Geobacter uraniireducens Rf4 5164404 YP_001230451.1 CDS Gura_1683 NC_009483.1 1952899 1954056 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 1952899..1954056 Geobacter uraniireducens Rf4 5164405 YP_001230452.1 CDS Gura_1684 NC_009483.1 1954128 1955357 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 1954128..1955357 Geobacter uraniireducens Rf4 5164406 YP_001230453.1 CDS Gura_1685 NC_009483.1 1955574 1956503 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 1955574..1956503 Geobacter uraniireducens Rf4 5164693 YP_001230454.1 CDS Gura_1686 NC_009483.1 1956638 1957717 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 1956638..1957717 Geobacter uraniireducens Rf4 5164694 YP_001230455.1 CDS Gura_1687 NC_009483.1 1957847 1958737 D TIGRFAM: methyltransferase FkbM family; FkbM family methyltransferase 1957847..1958737 Geobacter uraniireducens Rf4 5164695 YP_001230456.1 CDS Gura_1688 NC_009483.1 1959045 1960247 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 1959045..1960247 Geobacter uraniireducens Rf4 5165088 YP_001230457.1 CDS Gura_1689 NC_009483.1 1960450 1961595 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 1960450..1961595 Geobacter uraniireducens Rf4 5165089 YP_001230458.1 CDS Gura_1690 NC_009483.1 1961615 1962757 D hypothetical protein 1961615..1962757 Geobacter uraniireducens Rf4 5165090 YP_001230459.1 CDS hisH NC_009483.1 1962754 1963368 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 1962754..1963368 Geobacter uraniireducens Rf4 5165534 YP_001230460.1 CDS Gura_1692 NC_009483.1 1963372 1964151 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamide and glutamine to imidazole-glycerolphosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 1963372..1964151 Geobacter uraniireducens Rf4 5165535 YP_001230461.1 CDS Gura_1693 NC_009483.1 1964174 1965364 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 1964174..1965364 Geobacter uraniireducens Rf4 5165536 YP_001230462.1 CDS Gura_1694 NC_009483.1 1965430 1965798 D hypothetical protein 1965430..1965798 Geobacter uraniireducens Rf4 5165622 YP_001230463.1 CDS Gura_1695 NC_009483.1 1966008 1966145 D UDP-N-acetylglucosamine 2-epimerase-like protein 1966008..1966145 Geobacter uraniireducens Rf4 5165623 YP_001230464.1 CDS Gura_1696 NC_009483.1 1966399 1967529 D PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 1966399..1967529 Geobacter uraniireducens Rf4 5165624 YP_001230465.1 CDS Gura_1697 NC_009483.1 1967532 1968758 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 1967532..1968758 Geobacter uraniireducens Rf4 5165934 YP_001230466.1 CDS Gura_1698 NC_009483.1 1968755 1969369 D PFAM: sugar transferase; undecaprenyl-phosphate galactose phosphotransferase 1968755..1969369 Geobacter uraniireducens Rf4 5165935 YP_001230467.1 CDS Gura_1699 NC_009483.1 1969415 1969768 D hypothetical protein 1969415..1969768 Geobacter uraniireducens Rf4 5165936 YP_001230468.1 CDS Gura_1700 NC_009483.1 1969808 1970443 D Serine acetyltransferase-like protein 1969808..1970443 Geobacter uraniireducens Rf4 5163685 YP_001230469.1 CDS Gura_1701 NC_009483.1 1970494 1971747 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; glutamine--scyllo-inositol transaminase 1970494..1971747 Geobacter uraniireducens Rf4 5163686 YP_001230470.1 CDS Gura_1702 NC_009483.1 1972275 1974317 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; CoA-binding domain protein; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KR; polysaccharide biosynthesis protein CapD 1972275..1974317 Geobacter uraniireducens Rf4 5163687 YP_001230471.1 CDS Gura_1703 NC_009483.1 1974820 1975779 R TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase; 6-phosphofructokinase complement(1974820..1975779) Geobacter uraniireducens Rf4 5166741 YP_001230472.1 CDS Gura_1704 NC_009483.1 1975835 1977142 R PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; recombination factor protein RarA complement(1975835..1977142) Geobacter uraniireducens Rf4 5166742 YP_001230473.1 CDS Gura_1705 NC_009483.1 1977145 1979649 R TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35; glycogen/starch/alpha-glucan phosphorylase complement(1977145..1979649) Geobacter uraniireducens Rf4 5166743 YP_001230474.1 CDS Gura_1706 NC_009483.1 1979736 1980644 D PFAM: ATP-NAD/AcoX kinase; ATP-NAD/AcoX kinase 1979736..1980644 Geobacter uraniireducens Rf4 5166376 YP_001230475.1 CDS Gura_1707 NC_009483.1 1980731 1982392 D TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; DNA repair protein RecN 1980731..1982392 Geobacter uraniireducens Rf4 5166377 YP_001230476.1 CDS Gura_1708 NC_009483.1 1982439 1982891 D catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate; acetyltransferase 1982439..1982891 Geobacter uraniireducens Rf4 5166378 YP_001230477.1 CDS Gura_1709 NC_009483.1 1982962 1984299 D PFAM: peptidase U62, modulator of DNA gyrase; C69 family peptidase 1982962..1984299 Geobacter uraniireducens Rf4 5166206 YP_001230478.1 CDS Gura_1710 NC_009483.1 1984350 1984625 R PFAM: regulatory protein, ArsR; regulatory protein ArsR complement(1984350..1984625) Geobacter uraniireducens Rf4 5166207 YP_001230479.1 CDS Gura_1711 NC_009483.1 1984708 1985685 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(1984708..1985685) Geobacter uraniireducens Rf4 5166208 YP_001230480.1 CDS Gura_1712 NC_009483.1 1985682 1986644 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(1985682..1986644) Geobacter uraniireducens Rf4 5166724 YP_001230481.1 CDS Gura_1713 NC_009483.1 1986798 1988876 R TIGRFAM: metal dependent phophohydrolase; PFAM: GAF domain protein; histidine kinase, HAMP region domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(1986798..1988876) Geobacter uraniireducens Rf4 5166725 YP_001230482.1 CDS Gura_1714 NC_009483.1 1989315 1990424 D TIGRFAM: SpoIID/LytB domain; PFAM: Stage II sporulation D domain protein; SpoIID/LytB domain-containing protein 1989315..1990424 Geobacter uraniireducens Rf4 5166726 YP_001230483.1 CDS queA NC_009483.1 1990427 1991458 D Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1990427..1991458 Geobacter uraniireducens Rf4 5166000 YP_001230484.1 CDS Gura_1716 NC_009483.1 1991467 1992582 D TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 1991467..1992582 Geobacter uraniireducens Rf4 5166001 YP_001230485.1 CDS Gura_1717 NC_009483.1 1992661 1992981 D TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; preprotein translocase subunit YajC 1992661..1992981 Geobacter uraniireducens Rf4 5166002 YP_001230486.1 CDS secD NC_009483.1 1993013 1994614 D part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1993013..1994614 Geobacter uraniireducens Rf4 5166161 YP_001230487.1 CDS secF NC_009483.1 1994627 1995535 D forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1994627..1995535 Geobacter uraniireducens Rf4 5166162 YP_001230488.1 CDS Gura_1720 NC_009483.1 1995547 1996110 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein 1995547..1996110 Geobacter uraniireducens Rf4 5166163 YP_001230489.1 CDS Gura_1721 NC_009483.1 1996226 1997947 D TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; single-stranded-DNA-specific exonuclease RecJ 1996226..1997947 Geobacter uraniireducens Rf4 5166069 YP_001230490.1 CDS Gura_1722 NC_009483.1 1997950 1998849 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter 1997950..1998849 Geobacter uraniireducens Rf4 5166070 YP_001230491.1 CDS Gura_1723 NC_009483.1 1999061 2002960 D hypothetical protein 1999061..2002960 Geobacter uraniireducens Rf4 5166071 YP_001230492.1 CDS Gura_1725 NC_009483.1 2003389 2003724 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 2003389..2003724 Geobacter uraniireducens Rf4 5164837 YP_001230493.1 CDS Gura_1726 NC_009483.1 2003711 2004103 D PFAM: HEPN domain protein; HEPN domain-containing protein 2003711..2004103 Geobacter uraniireducens Rf4 5164838 YP_001230494.1 CDS Gura_1727 NC_009483.1 2004282 2005127 R hypothetical protein complement(2004282..2005127) Geobacter uraniireducens Rf4 5162816 YP_001230495.1 CDS Gura_1728 NC_009483.1 2005434 2007371 R molecular chaperone; heat shock protein 90 complement(2005434..2007371) Geobacter uraniireducens Rf4 5162817 YP_001230496.1 CDS Gura_1729 NC_009483.1 2007829 2010723 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; Cache domain protein; histidine kinase, dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; signal transduction histidine kinase 2007829..2010723 Geobacter uraniireducens Rf4 5162818 YP_001230497.1 CDS Gura_1730 NC_009483.1 2010844 2012619 D PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; multi-sensor signal transduction histidine kinase 2010844..2012619 Geobacter uraniireducens Rf4 5163105 YP_001230498.1 CDS Gura_1731 NC_009483.1 2012724 2014199 D TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; anthranilate synthase component I 2012724..2014199 Geobacter uraniireducens Rf4 5163106 YP_001230499.1 CDS Gura_1732 NC_009483.1 2014300 2014875 D TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 2014300..2014875 Geobacter uraniireducens Rf4 5163107 YP_001230500.1 CDS trpD NC_009483.1 2014928 2015980 D Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2014928..2015980 Geobacter uraniireducens Rf4 5163847 YP_001230501.1 CDS trpC NC_009483.1 2015999 2016805 D involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 2015999..2016805 Geobacter uraniireducens Rf4 5163848 YP_001230502.1 CDS Gura_1735 NC_009483.1 2017053 2018405 D catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta 2017053..2018405 Geobacter uraniireducens Rf4 5163849 YP_001230503.1 CDS Gura_1736 NC_009483.1 2018544 2019155 D catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 2018544..2019155 Geobacter uraniireducens Rf4 5163767 YP_001230504.1 CDS Gura_1737 NC_009483.1 2019236 2020861 D catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 2019236..2020861 Geobacter uraniireducens Rf4 5163768 YP_001230505.1 CDS Gura_1738 NC_009483.1 2020987 2022051 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase complement(2020987..2022051) Geobacter uraniireducens Rf4 5163769 YP_001230506.1 CDS Gura_1739 NC_009483.1 2022155 2022745 R PFAM: isochorismatase hydrolase; isochorismatase hydrolase complement(2022155..2022745) Geobacter uraniireducens Rf4 5164909 YP_001230507.1 CDS Gura_1741 NC_009483.1 2023099 2024274 R hypothetical protein complement(2023099..2024274) Geobacter uraniireducens Rf4 5164911 YP_001230508.1 CDS Gura_1742 NC_009483.1 2024274 2024969 R hypothetical protein complement(2024274..2024969) Geobacter uraniireducens Rf4 5165509 YP_001230509.1 CDS Gura_1743 NC_009483.1 2025431 2027290 D PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase 2025431..2027290 Geobacter uraniireducens Rf4 5165510 YP_001230510.1 CDS Gura_1744 NC_009483.1 2027353 2027985 D hypothetical protein 2027353..2027985 Geobacter uraniireducens Rf4 5165511 YP_001230511.1 CDS Gura_1745 NC_009483.1 2028037 2028765 R PFAM: lipolytic enzyme, G-D-S-L family; GDSL family lipase complement(2028037..2028765) Geobacter uraniireducens Rf4 5166510 YP_001230512.1 CDS Gura_1746 NC_009483.1 2029007 2030566 R hypothetical protein complement(2029007..2030566) Geobacter uraniireducens Rf4 5166511 YP_001230513.1 CDS Gura_1747 NC_009483.1 2031116 2031310 R hypothetical protein complement(2031116..2031310) Geobacter uraniireducens Rf4 5166512 YP_001230514.1 CDS Gura_1748 NC_009483.1 2031508 2031846 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(2031508..2031846) Geobacter uraniireducens Rf4 5166316 YP_001230515.1 CDS Gura_1749 NC_009483.1 2032499 2033047 D TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 2032499..2033047 Geobacter uraniireducens Rf4 5166317 YP_001230516.1 CDS Gura_1750 NC_009483.1 2033145 2033423 D hypothetical protein 2033145..2033423 Geobacter uraniireducens Rf4 5166318 YP_001230517.1 CDS Gura_1751 NC_009483.1 2033416 2033811 D PFAM: PilT protein domain protein; PilT domain-containing protein 2033416..2033811 Geobacter uraniireducens Rf4 5165038 YP_001230518.1 CDS Gura_1754 NC_009483.1 2034432 2035346 R hypothetical protein complement(2034432..2035346) Geobacter uraniireducens Rf4 5162979 YP_001230519.1 CDS Gura_1755 NC_009483.1 2035581 2036435 R hypothetical protein complement(2035581..2036435) Geobacter uraniireducens Rf4 5162980 YP_001230520.1 CDS Gura_1756 NC_009483.1 2036467 2038599 R TIGRFAM: metal dependent phophohydrolase; PFAM: GAF domain protein; histidine kinase, HAMP region domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(2036467..2038599) Geobacter uraniireducens Rf4 5162981 YP_001230521.1 CDS Gura_1757 NC_009483.1 2038612 2039112 R hypothetical protein complement(2038612..2039112) Geobacter uraniireducens Rf4 5164092 YP_001230522.1 CDS Gura_1758 NC_009483.1 2039412 2040839 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase complement(2039412..2040839) Geobacter uraniireducens Rf4 5164093 YP_001230523.1 CDS Gura_1759 NC_009483.1 2040960 2041583 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein complement(2040960..2041583) Geobacter uraniireducens Rf4 5164094 YP_001230524.1 CDS Gura_1760 NC_009483.1 2041832 2042707 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NAD-dependent epimerase/dehydratase 2041832..2042707 Geobacter uraniireducens Rf4 5166986 YP_001230525.1 CDS Gura_1761 NC_009483.1 2042723 2043742 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase complement(2042723..2043742) Geobacter uraniireducens Rf4 5166987 YP_001230526.1 CDS Gura_1762 NC_009483.1 2043989 2044621 D hypothetical protein 2043989..2044621 Geobacter uraniireducens Rf4 5166988 YP_001230527.1 CDS Gura_1763 NC_009483.1 2044759 2045004 R hypothetical protein complement(2044759..2045004) Geobacter uraniireducens Rf4 5166241 YP_001230528.1 CDS Gura_1764 NC_009483.1 2045106 2045345 D hypothetical protein 2045106..2045345 Geobacter uraniireducens Rf4 5166242 YP_001230529.1 CDS Gura_1765 NC_009483.1 2045408 2045986 D hypothetical protein 2045408..2045986 Geobacter uraniireducens Rf4 5166243 YP_001230530.1 CDS Gura_1766 NC_009483.1 2046098 2046412 D hypothetical protein 2046098..2046412 Geobacter uraniireducens Rf4 5164127 YP_001230531.1 CDS Gura_1767 NC_009483.1 2046402 2047403 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 2046402..2047403 Geobacter uraniireducens Rf4 5164128 YP_001230532.1 CDS Gura_1768 NC_009483.1 2047400 2048296 D Fe-S oxidoreductase-like protein 2047400..2048296 Geobacter uraniireducens Rf4 5164129 YP_001230533.1 CDS mutL NC_009483.1 2048663 2050471 D This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 2048663..2050471 Geobacter uraniireducens Rf4 5166508 YP_001230534.1 CDS miaA NC_009483.1 2050564 2051496 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 2050564..2051496 Geobacter uraniireducens Rf4 5166509 YP_001230535.1 CDS Gura_1772 NC_009483.1 2051508 2051732 D TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein, core; RNA chaperone Hfq 2051508..2051732 Geobacter uraniireducens Rf4 5166164 YP_001230536.1 CDS Gura_1773 NC_009483.1 2051875 2052948 D PFAM: protein of unknown function UPF0118; hypothetical protein 2051875..2052948 Geobacter uraniireducens Rf4 5166165 YP_001230537.1 CDS Gura_1774 NC_009483.1 2052948 2054240 D PFAM: protein of unknown function DUF512; hypothetical protein 2052948..2054240 Geobacter uraniireducens Rf4 5166166 YP_001230538.1 CDS Gura_1775 NC_009483.1 2054278 2055144 D PFAM: protein of unknown function DUF399; hypothetical protein 2054278..2055144 Geobacter uraniireducens Rf4 5165721 YP_001230539.1 CDS Gura_1776 NC_009483.1 2055245 2055460 R hypothetical protein complement(2055245..2055460) Geobacter uraniireducens Rf4 5165722 YP_001230540.1 CDS Gura_1777 NC_009483.1 2055765 2056940 R PFAM: transposase, IS4 family protein; transposase, IS4 family protein complement(2055765..2056940) Geobacter uraniireducens Rf4 5165723 YP_001230541.1 CDS Gura_1778 NC_009483.1 2057219 2057731 D TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; transcription elongation factor GreB 2057219..2057731 Geobacter uraniireducens Rf4 5164780 YP_001230542.1 CDS Gura_1779 NC_009483.1 2057791 2058360 D hypothetical protein 2057791..2058360 Geobacter uraniireducens Rf4 5164781 YP_001230543.1 CDS eno NC_009483.1 2058855 2060144 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(2058855..2060144) Geobacter uraniireducens Rf4 5164782 YP_001230544.1 CDS Gura_1781 NC_009483.1 2060442 2062838 D TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; metal-dependent phosphohydrolase, 7TM intracellular region; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 2060442..2062838 Geobacter uraniireducens Rf4 5166516 YP_001230545.1 CDS Gura_1782 NC_009483.1 2062801 2063190 D PFAM: protein of unknown function UPF0054; hypothetical protein 2062801..2063190 Geobacter uraniireducens Rf4 5166517 YP_001230546.1 CDS Gura_1783 NC_009483.1 2063238 2063945 D PFAM: phosphoesterase, PA-phosphatase related; diacylglycerol kinase; diacylglycerol kinase 2063238..2063945 Geobacter uraniireducens Rf4 5166518 YP_001230547.1 CDS Gura_1784 NC_009483.1 2064012 2064866 D PFAM: CBS domain containing protein; transporter-associated region; hypothetical protein 2064012..2064866 Geobacter uraniireducens Rf4 5163715 YP_001230548.1 CDS lnt NC_009483.1 2064866 2066431 D Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 2064866..2066431 Geobacter uraniireducens Rf4 5163716 YP_001230549.1 CDS Gura_1786 NC_009483.1 2066607 2067560 D TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; peptide chain release factor 2 2066607..2067560 Geobacter uraniireducens Rf4 5163717 YP_001230550.1 CDS Gura_1787 NC_009483.1 2067607 2068443 D PFAM: NLP/P60 protein; Sporulation domain protein; NLP/P60 protein 2067607..2068443 Geobacter uraniireducens Rf4 5165832 YP_001230551.1 CDS Gura_1788 NC_009483.1 2068600 2069770 D hypothetical protein join(2068600..2068956,2068955..2069770) Geobacter uraniireducens Rf4 5165833 YP_001230552.1 CDS Gura_1789 NC_009483.1 2069935 2071176 D PFAM: uncharacterised conserved protein UCP033563; hypothetical protein 2069935..2071176 Geobacter uraniireducens Rf4 5165834 YP_001230553.1 CDS Gura_1790 NC_009483.1 2071287 2071754 D PFAM: peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 2071287..2071754 Geobacter uraniireducens Rf4 5164384 YP_001230554.1 CDS Gura_1791 NC_009483.1 2071853 2072830 D hypothetical protein 2071853..2072830 Geobacter uraniireducens Rf4 5164385 YP_001230555.1 CDS Gura_1792 NC_009483.1 2072871 2074124 D PFAM: regulator of chromosome condensation, RCC1; regulator of chromosome condensation, RCC1 2072871..2074124 Geobacter uraniireducens Rf4 5164386 YP_001230556.1 CDS Gura_1793 NC_009483.1 2074252 2075148 D PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 2074252..2075148 Geobacter uraniireducens Rf4 5165229 YP_001230557.1 CDS secA NC_009483.1 2075350 2078034 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 2075350..2078034 Geobacter uraniireducens Rf4 5165230 YP_001230558.1 CDS argJ NC_009483.1 2078093 2079274 D bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 2078093..2079274 Geobacter uraniireducens Rf4 5165231 YP_001230559.1 CDS Gura_1796 NC_009483.1 2079331 2079744 D hypothetical protein 2079331..2079744 Geobacter uraniireducens Rf4 5164214 YP_001230560.1 CDS Gura_1797 NC_009483.1 2079840 2081015 D PFAM: beta-lactamase; beta-lactamase 2079840..2081015 Geobacter uraniireducens Rf4 5164215 YP_001230561.1 CDS Gura_1798 NC_009483.1 2081148 2082413 D PFAM: response regulator receiver; response regulator receiver protein 2081148..2082413 Geobacter uraniireducens Rf4 5164216 YP_001230562.1 CDS valS NC_009483.1 2082502 2085162 D valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 2082502..2085162 Geobacter uraniireducens Rf4 5164954 YP_001230563.1 CDS Gura_1800 NC_009483.1 2085222 2086013 D PFAM: peptidase A24A, prepilin type IV; peptidase A24A domain protein; peptidase A24A domain-containing protein 2085222..2086013 Geobacter uraniireducens Rf4 5164955 YP_001230564.1 CDS Gura_1801 NC_009483.1 2086021 2087607 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 2086021..2087607 Geobacter uraniireducens Rf4 5164956 YP_001230565.1 CDS Gura_1802 NC_009483.1 2087611 2088990 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 2087611..2088990 Geobacter uraniireducens Rf4 5164060 YP_001230566.1 CDS Gura_1803 NC_009483.1 2089186 2089968 D hypothetical protein 2089186..2089968 Geobacter uraniireducens Rf4 5164061 YP_001230567.1 CDS Gura_1804 NC_009483.1 2090041 2094489 D Tfp pilus assembly protein tip-associated adhesin PilY1-like protein 2090041..2094489 Geobacter uraniireducens Rf4 5164062 YP_001230568.1 CDS Gura_1805 NC_009483.1 2094491 2094970 D hypothetical protein 2094491..2094970 Geobacter uraniireducens Rf4 5164486 YP_001230569.1 CDS Gura_1806 NC_009483.1 2094948 2095328 D hypothetical protein 2094948..2095328 Geobacter uraniireducens Rf4 5164487 YP_001230570.1 CDS Gura_1807 NC_009483.1 2095387 2096634 D hypothetical protein 2095387..2096634 Geobacter uraniireducens Rf4 5164488 YP_001230571.1 CDS Gura_1808 NC_009483.1 2096661 2097284 D hypothetical protein 2096661..2097284 Geobacter uraniireducens Rf4 5163793 YP_001230572.1 CDS Gura_1809 NC_009483.1 2097603 2097803 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 2097603..2097803 Geobacter uraniireducens Rf4 5163794 YP_001230573.1 CDS Gura_1810 NC_009483.1 2097825 2098877 D TIGRFAM: type IV pilus assembly protein PilM; type IV pilus assembly protein PilM 2097825..2098877 Geobacter uraniireducens Rf4 5163795 YP_001230574.1 CDS Gura_1811 NC_009483.1 2098874 2099449 D PFAM: Fimbrial assembly family protein; fimbrial assembly family protein 2098874..2099449 Geobacter uraniireducens Rf4 5164247 YP_001230575.1 CDS Gura_1812 NC_009483.1 2099490 2100089 D PFAM: Pilus assembly protein, PilO; pilus assembly protein, PilO 2099490..2100089 Geobacter uraniireducens Rf4 5164248 YP_001230576.1 CDS Gura_1813 NC_009483.1 2100070 2100621 D hypothetical protein 2100070..2100621 Geobacter uraniireducens Rf4 5164249 YP_001230577.1 CDS Gura_1814 NC_009483.1 2100634 2103468 D TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB, short N-terminal domain; type IV pilus secretin PilQ 2100634..2103468 Geobacter uraniireducens Rf4 5163660 YP_001230578.1 CDS Gura_1815 NC_009483.1 2103480 2104058 D hypothetical protein 2103480..2104058 Geobacter uraniireducens Rf4 5163661 YP_001230579.1 CDS Gura_1816 NC_009483.1 2104144 2109024 D PFAM: Ig family protein; Ig family protein 2104144..2109024 Geobacter uraniireducens Rf4 5163662 YP_001230580.1 CDS Gura_1817 NC_009483.1 2109139 2109465 D hypothetical protein 2109139..2109465 Geobacter uraniireducens Rf4 5163976 YP_001230581.1 CDS Gura_1818 NC_009483.1 2109543 2110724 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 2109543..2110724 Geobacter uraniireducens Rf4 5163977 YP_001230582.1 CDS Gura_1819 NC_009483.1 2110726 2111235 D PFAM: shikimate kinase; shikimate kinase 2110726..2111235 Geobacter uraniireducens Rf4 5163978 YP_001230583.1 CDS aroB NC_009483.1 2111237 2112319 D catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 2111237..2112319 Geobacter uraniireducens Rf4 5163814 YP_001230584.1 CDS Gura_1821 NC_009483.1 2112322 2113314 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 2112322..2113314 Geobacter uraniireducens Rf4 5163815 YP_001230585.1 CDS Gura_1822 NC_009483.1 2113314 2113676 D hypothetical protein 2113314..2113676 Geobacter uraniireducens Rf4 5163816 YP_001230586.1 CDS Gura_1823 NC_009483.1 2113780 2114214 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 2113780..2114214 Geobacter uraniireducens Rf4 5163396 YP_001230587.1 CDS Gura_1824 NC_009483.1 2114235 2115305 D PFAM: creatinase; peptidase M24; peptidase M24 2114235..2115305 Geobacter uraniireducens Rf4 5163397 YP_001230588.1 CDS Gura_1825 NC_009483.1 2115368 2115841 D TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 2115368..2115841 Geobacter uraniireducens Rf4 5163398 YP_001230589.1 CDS Gura_1826 NC_009483.1 2115906 2117246 D TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; acetyl-CoA carboxylase, biotin carboxylase 2115906..2117246 Geobacter uraniireducens Rf4 5163611 YP_001230590.1 CDS Gura_1827 NC_009483.1 2117249 2117635 D TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; glycine cleavage system H protein 2117249..2117635 Geobacter uraniireducens Rf4 5163612 YP_001230591.1 CDS Gura_1828 NC_009483.1 2117719 2118540 D PFAM: protein of unknown function DUF178; hypothetical protein 2117719..2118540 Geobacter uraniireducens Rf4 5163613 YP_001230592.1 CDS Gura_1829 NC_009483.1 2118673 2119125 R PFAM: NUDIX hydrolase; NUDIX hydrolase complement(2118673..2119125) Geobacter uraniireducens Rf4 5162985 YP_001230593.1 CDS Gura_1830 NC_009483.1 2119213 2119506 R hypothetical protein complement(2119213..2119506) Geobacter uraniireducens Rf4 5162986 YP_001230594.1 CDS Gura_1831 NC_009483.1 2119750 2121168 D PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase subunit alpha/beta 2119750..2121168 Geobacter uraniireducens Rf4 5162987 YP_001230595.1 CDS Gura_1832 NC_009483.1 2121492 2122352 D TIGRFAM: Fe-S cluster assembly protein NifU; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; Fe-S cluster assembly protein NifU 2121492..2122352 Geobacter uraniireducens Rf4 5163388 YP_001230596.1 CDS Gura_1833 NC_009483.1 2122349 2123518 D PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; class V aminotransferase 2122349..2123518 Geobacter uraniireducens Rf4 5163389 YP_001230597.1 CDS Gura_1834 NC_009483.1 2123595 2128430 R TIGRFAM: cytochrome C family protein; cytochrome C family protein complement(2123595..2128430) Geobacter uraniireducens Rf4 5163390 YP_001230598.1 CDS Gura_1835 NC_009483.1 2128497 2129003 R hypothetical protein complement(2128497..2129003) Geobacter uraniireducens Rf4 5166185 YP_001230599.1 CDS Gura_1836 NC_009483.1 2129041 2131761 R PFAM: NHL repeat containing protein; NHL repeat-containing protein complement(2129041..2131761) Geobacter uraniireducens Rf4 5166186 YP_001230600.1 CDS Gura_1837 NC_009483.1 2131880 2132914 R TIGRFAM: cytochrome C family protein; cytochrome C family protein complement(2131880..2132914) Geobacter uraniireducens Rf4 5166187 YP_001230601.1 CDS Gura_1838 NC_009483.1 2132939 2133412 R hypothetical protein complement(2132939..2133412) Geobacter uraniireducens Rf4 5165997 YP_001230602.1 CDS Gura_1839 NC_009483.1 2133409 2134704 R hypothetical protein complement(2133409..2134704) Geobacter uraniireducens Rf4 5165998 YP_001230603.1 CDS Gura_1840 NC_009483.1 2135026 2136396 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator complement(2135026..2136396) Geobacter uraniireducens Rf4 5165999 YP_001230604.1 CDS Gura_1841 NC_009483.1 2136424 2138922 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; multi-sensor signal transduction histidine kinase complement(2136424..2138922) Geobacter uraniireducens Rf4 5162772 YP_001230605.1 CDS Gura_1842 NC_009483.1 2139106 2140947 D TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; UbiD family decarboxylase 2139106..2140947 Geobacter uraniireducens Rf4 5162773 YP_001230606.1 CDS Gura_1843 NC_009483.1 2140986 2142527 D PFAM: SEFIR domain protein; SEFIR domain-containing protein 2140986..2142527 Geobacter uraniireducens Rf4 5162774 YP_001230607.1 CDS Gura_1844 NC_009483.1 2142567 2144489 D ATP-dependent OLD family endonuclease 2142567..2144489 Geobacter uraniireducens Rf4 5166748 YP_001230608.1 CDS Gura_1845 NC_009483.1 2144486 2146348 D PFAM: UvrD/REP helicase; UvrD/REP helicase 2144486..2146348 Geobacter uraniireducens Rf4 5166749 YP_001230609.1 CDS Gura_1846 NC_009483.1 2146625 2147152 D hypothetical protein 2146625..2147152 Geobacter uraniireducens Rf4 5166750 YP_001230610.1 CDS Gura_1847 NC_009483.1 2147457 2147699 R hypothetical protein complement(2147457..2147699) Geobacter uraniireducens Rf4 5162613 YP_001230611.1 CDS Gura_1848 NC_009483.1 2147779 2148777 R PFAM: Integrase, catalytic region; integrase catalytic subunit complement(2147779..2148777) Geobacter uraniireducens Rf4 5162614 YP_001230612.1 CDS Gura_1849 NC_009483.1 2148777 2149211 R hypothetical protein complement(2148777..2149211) Geobacter uraniireducens Rf4 5162615 YP_001230613.1 CDS Gura_1850 NC_009483.1 2149337 2150473 R PFAM: transposase, IS4 family protein; transposase, IS4 family protein complement(2149337..2150473) Geobacter uraniireducens Rf4 5165634 YP_001230614.1 CDS Gura_1851 NC_009483.1 2151115 2151912 D hypothetical protein 2151115..2151912 Geobacter uraniireducens Rf4 5165635 YP_001230615.1 CDS Gura_1852 NC_009483.1 2151896 2152450 D hypothetical protein 2151896..2152450 Geobacter uraniireducens Rf4 5165636 YP_001230616.1 CDS Gura_1853 NC_009483.1 2152478 2152927 D hypothetical protein 2152478..2152927 Geobacter uraniireducens Rf4 5166862 YP_001230617.1 CDS Gura_1854 NC_009483.1 2152986 2153360 R hypothetical protein complement(2152986..2153360) Geobacter uraniireducens Rf4 5166863 YP_001230618.1 CDS Gura_1855 NC_009483.1 2153673 2154209 D regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 2153673..2154209 Geobacter uraniireducens Rf4 5166864 YP_001230619.1 CDS pyrB NC_009483.1 2154282 2155217 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 2154282..2155217 Geobacter uraniireducens Rf4 5166200 YP_001230620.1 CDS Gura_1857 NC_009483.1 2155328 2156605 D TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; Amidohydrolase 3; dihydroorotase, multifunctional complex type 2155328..2156605 Geobacter uraniireducens Rf4 5166201 YP_001230621.1 CDS Gura_1858 NC_009483.1 2156671 2157792 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 2156671..2157792 Geobacter uraniireducens Rf4 5166202 YP_001230622.1 CDS Gura_1859 NC_009483.1 2157879 2158781 D PFAM: Radical SAM domain protein; radical SAM domain-containing protein 2157879..2158781 Geobacter uraniireducens Rf4 5164794 YP_001230623.1 CDS Gura_1860 NC_009483.1 2158778 2159107 D PFAM: protein of unknown function DUF486; hypothetical protein 2158778..2159107 Geobacter uraniireducens Rf4 5164795 YP_001230624.1 CDS Gura_1861 NC_009483.1 2159109 2159531 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 2159109..2159531 Geobacter uraniireducens Rf4 5164796 YP_001230625.1 CDS Gura_1862 NC_009483.1 2159524 2159943 D PFAM: protein of unknown function DUF86; hypothetical protein 2159524..2159943 Geobacter uraniireducens Rf4 5166866 YP_001230626.1 CDS Gura_1863 NC_009483.1 2160037 2162439 D PFAM: SEC-C motif domain protein; SecC motif-containing protein 2160037..2162439 Geobacter uraniireducens Rf4 5166867 YP_001230627.1 CDS Gura_1864 NC_009483.1 2162556 2165804 D TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain, oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; RimK domain protein ATP-grasp; carbamoyl-phosphate synthase large subunit 2162556..2165804 Geobacter uraniireducens Rf4 5166868 YP_001230628.1 CDS greA NC_009483.1 2165916 2166392 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 2165916..2166392 Geobacter uraniireducens Rf4 5163436 YP_001230629.1 CDS Gura_1866 NC_009483.1 2166486 2166683 D hypothetical protein 2166486..2166683 Geobacter uraniireducens Rf4 5163437 YP_001230630.1 CDS Gura_1867 NC_009483.1 2166833 2167060 D PFAM: SpoVT/AbrB domain protein; SpoVT/AbrB domain-containing protein 2166833..2167060 Geobacter uraniireducens Rf4 5163438 YP_001230631.1 CDS Gura_1868 NC_009483.1 2167060 2167461 D PFAM: PilT protein domain protein; SMART: Nucleotide binding protein, PINc; PilT domain-containing protein 2167060..2167461 Geobacter uraniireducens Rf4 5166869 YP_001230632.1 CDS Gura_1869 NC_009483.1 2167837 2170326 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 2167837..2170326 Geobacter uraniireducens Rf4 5166870 YP_001230633.1 CDS Gura_1870 NC_009483.1 2170404 2171471 R PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; threonine aldolase complement(2170404..2171471) Geobacter uraniireducens Rf4 5166871 YP_001230634.1 CDS Gura_1871 NC_009483.1 2171718 2174726 D TIGRFAM: putative delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase; Proline dehydrogenase; putative delta-1-pyrroline-5-carboxylate dehydrogenase 2171718..2174726 Geobacter uraniireducens Rf4 5166905 YP_001230635.1 CDS Gura_1872 NC_009483.1 2174913 2175449 D PFAM: protein of unknown function DUF177; hypothetical protein 2174913..2175449 Geobacter uraniireducens Rf4 5166906 YP_001230636.1 CDS rpmF NC_009483.1 2175466 2175648 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 2175466..2175648 Geobacter uraniireducens Rf4 5166907 YP_001230637.1 CDS Gura_1874 NC_009483.1 2175700 2176740 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 2175700..2176740 Geobacter uraniireducens Rf4 5163171 YP_001230638.1 CDS Gura_1875 NC_009483.1 2176755 2177735 D TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 2176755..2177735 Geobacter uraniireducens Rf4 5163172 YP_001230639.1 CDS Gura_1876 NC_009483.1 2177758 2178693 D TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; malonyl CoA-acyl carrier protein transacylase 2177758..2178693 Geobacter uraniireducens Rf4 5163173 YP_001230640.1 CDS Gura_1877 NC_009483.1 2178690 2179430 D TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; 3-oxoacyl-(acyl-carrier-protein) reductase 2178690..2179430 Geobacter uraniireducens Rf4 5164294 YP_001230641.1 CDS acpP NC_009483.1 2179575 2179808 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 2179575..2179808 Geobacter uraniireducens Rf4 5164295 YP_001230642.1 CDS Gura_1879 NC_009483.1 2179896 2181128 D PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase 2179896..2181128 Geobacter uraniireducens Rf4 5164296 YP_001230643.1 CDS Gura_1880 NC_009483.1 2181146 2181595 D TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; RpiB/LacA/LacB family sugar-phosphate isomerase 2181146..2181595 Geobacter uraniireducens Rf4 5164653 YP_001230644.1 CDS glyA NC_009483.1 2181693 2182940 D catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 2181693..2182940 Geobacter uraniireducens Rf4 5164654 YP_001230645.1 CDS Gura_1882 NC_009483.1 2183019 2183471 R hypothetical protein complement(2183019..2183471) Geobacter uraniireducens Rf4 5164655 YP_001230646.1 CDS Gura_1883 NC_009483.1 2183503 2184099 R hypothetical protein complement(2183503..2184099) Geobacter uraniireducens Rf4 5164874 YP_001230647.1 CDS Gura_1884 NC_009483.1 2184469 2185644 D hypothetical protein 2184469..2185644 Geobacter uraniireducens Rf4 5164875 YP_001230648.1 CDS Gura_1885 NC_009483.1 2185657 2188050 D TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 2185657..2188050 Geobacter uraniireducens Rf4 5164876 YP_001230649.1 CDS Gura_1886 NC_009483.1 2188167 2189555 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; diguanylate cyclase 2188167..2189555 Geobacter uraniireducens Rf4 5165162 YP_001230650.1 CDS hisS NC_009483.1 2189589 2190836 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 2189589..2190836 Geobacter uraniireducens Rf4 5165163 YP_001230651.1 CDS Gura_1888 NC_009483.1 2190934 2191875 D PFAM: protein of unknown function DUF610, YibQ; hypothetical protein 2190934..2191875 Geobacter uraniireducens Rf4 5165164 YP_001230652.1 CDS Gura_1889 NC_009483.1 2191945 2193345 R chromosome partitioning ATPase complement(2191945..2193345) Geobacter uraniireducens Rf4 5165356 YP_001230653.1 CDS xseA NC_009483.1 2193436 2194776 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 2193436..2194776 Geobacter uraniireducens Rf4 5165357 YP_001230654.1 CDS Gura_1891 NC_009483.1 2194799 2195482 R PFAM: Haloacid dehalogenase domain protein hydrolase; hydrolase complement(2194799..2195482) Geobacter uraniireducens Rf4 5165358 YP_001230655.1 CDS Gura_1892 NC_009483.1 2195535 2196917 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(2195535..2196917) Geobacter uraniireducens Rf4 5165512 YP_001230656.1 CDS Gura_1893 NC_009483.1 2197034 2197966 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein complement(2197034..2197966) Geobacter uraniireducens Rf4 5165513 YP_001230657.1 CDS Gura_1894 NC_009483.1 2197959 2198933 R PFAM: Mammalian cell entry related domain protein; hypothetical protein complement(2197959..2198933) Geobacter uraniireducens Rf4 5165514 YP_001230658.1 CDS Gura_1895 NC_009483.1 2198930 2199589 R organic solvents resistance ABC transporter ATPase-like protein complement(2198930..2199589) Geobacter uraniireducens Rf4 5165522 YP_001230659.1 CDS Gura_1896 NC_009483.1 2199636 2200412 R PFAM: protein of unknown function DUF140; hypothetical protein complement(2199636..2200412) Geobacter uraniireducens Rf4 5165523 YP_001230660.1 CDS Gura_1897 NC_009483.1 2200428 2201186 R PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein complement(2200428..2201186) Geobacter uraniireducens Rf4 5165524 YP_001230661.1 CDS Gura_1898 NC_009483.1 2201452 2201931 D PFAM: protein of unknown function DUF150; hypothetical protein 2201452..2201931 Geobacter uraniireducens Rf4 5163678 YP_001230662.1 CDS nusA NC_009483.1 2201986 2203137 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 2201986..2203137 Geobacter uraniireducens Rf4 5163679 YP_001230663.1 CDS Gura_1900 NC_009483.1 2203140 2203733 D PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; protein of unknown function DUF448; hypothetical protein 2203140..2203733 Geobacter uraniireducens Rf4 5163680 YP_001230664.1 CDS infB NC_009483.1 2203734 2206382 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 2203734..2206382 Geobacter uraniireducens Rf4 5164824 YP_001230665.1 CDS Gura_1902 NC_009483.1 2206437 2206805 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 2206437..2206805 Geobacter uraniireducens Rf4 5164825 YP_001230666.1 CDS Gura_1903 NC_009483.1 2206786 2207736 D PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; phosphoesterase domain-containing protein 2206786..2207736 Geobacter uraniireducens Rf4 5164826 YP_001230667.1 CDS Gura_1904 NC_009483.1 2207740 2208672 D TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B 2207740..2208672 Geobacter uraniireducens Rf4 5167022 YP_001230668.1 CDS rpsO NC_009483.1 2208771 2209037 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 2208771..2209037 Geobacter uraniireducens Rf4 5167023 YP_001230669.1 CDS Gura_1906 NC_009483.1 2209282 2211372 D PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 2209282..2211372 Geobacter uraniireducens Rf4 5167024 YP_001230670.1 CDS Gura_1907 NC_009483.1 2211411 2212670 D PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein 2211411..2212670 Geobacter uraniireducens Rf4 5165350 YP_001230671.1 CDS dut NC_009483.1 2212642 2213133 D catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 2212642..2213133 Geobacter uraniireducens Rf4 5165351 YP_001230672.1 CDS Gura_1909 NC_009483.1 2213158 2214264 D PFAM: peptidase M29, aminopeptidase II; peptidase M29, aminopeptidase II 2213158..2214264 Geobacter uraniireducens Rf4 5165352 YP_001230673.1 CDS Gura_1910 NC_009483.1 2214264 2214872 D TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain; Sua5/YciO/YrdC/YwlC family protein 2214264..2214872 Geobacter uraniireducens Rf4 5166188 YP_001230674.1 CDS Gura_1911 NC_009483.1 2214887 2215240 D hypothetical protein 2214887..2215240 Geobacter uraniireducens Rf4 5166189 YP_001230675.1 CDS Gura_1912 NC_009483.1 2215332 2216180 R PFAM: Patatin; patatin complement(2215332..2216180) Geobacter uraniireducens Rf4 5166190 YP_001230676.1 CDS Gura_1913 NC_009483.1 2216249 2216713 D hypothetical protein 2216249..2216713 Geobacter uraniireducens Rf4 5162610 YP_001230677.1 CDS Gura_1914 NC_009483.1 2217011 2218312 D TIGRFAM: trigger factor; PFAM: peptidylprolyl isomerase, FKBP-type; trigger factor, C-terminal domain protein; trigger factor, N-terminal domain; trigger factor 2217011..2218312 Geobacter uraniireducens Rf4 5162611 YP_001230678.1 CDS clpP NC_009483.1 2218343 2218942 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2218343..2218942 Geobacter uraniireducens Rf4 5162612 YP_001230679.1 CDS clpX NC_009483.1 2218939 2220192 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2218939..2220192 Geobacter uraniireducens Rf4 5162849 YP_001230680.1 CDS Gura_1917 NC_009483.1 2220209 2222635 D TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La 2220209..2222635 Geobacter uraniireducens Rf4 5162850 YP_001230681.1 CDS Gura_1918 NC_009483.1 2222740 2223015 D PFAM: histone family protein DNA-binding protein; histone family protein DNA-binding protein 2222740..2223015 Geobacter uraniireducens Rf4 5162851 YP_001230682.1 CDS Gura_1919 NC_009483.1 2223687 2224412 D PFAM: glycosyl transferase, family 2; dolichyl-phosphate beta-D-mannosyltransferase 2223687..2224412 Geobacter uraniireducens Rf4 5165442 YP_001230683.1 CDS Gura_1920 NC_009483.1 2224614 2225645 D PFAM: NHL repeat containing protein; NHL repeat-containing protein 2224614..2225645 Geobacter uraniireducens Rf4 5165515 YP_001230684.1 CDS Gura_1921 NC_009483.1 2225642 2226391 D hypothetical protein 2225642..2226391 Geobacter uraniireducens Rf4 5166223 YP_001230685.1 CDS Gura_1922 NC_009483.1 2226405 2227502 D hypothetical protein 2226405..2227502 Geobacter uraniireducens Rf4 5166224 YP_001230686.1 CDS Gura_1923 NC_009483.1 2227646 2228854 D PFAM: type II secretion system protein; type II secretion system protein 2227646..2228854 Geobacter uraniireducens Rf4 5166225 YP_001230687.1 CDS Gura_1924 NC_009483.1 2228855 2230585 D PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; type II secretion system protein E 2228855..2230585 Geobacter uraniireducens Rf4 5166696 YP_001230688.1 CDS Gura_1925 NC_009483.1 2230717 2231643 D Tfp pilus assembly protein ATPase PilM-like protein 2230717..2231643 Geobacter uraniireducens Rf4 5166697 YP_001230689.1 CDS Gura_1926 NC_009483.1 2231643 2232182 D PFAM: Fimbrial assembly family protein; fimbrial assembly family protein 2231643..2232182 Geobacter uraniireducens Rf4 5166698 YP_001230690.1 CDS Gura_1927 NC_009483.1 2232179 2232733 D hypothetical protein 2232179..2232733 Geobacter uraniireducens Rf4 5165136 YP_001230691.1 CDS Gura_1928 NC_009483.1 2232730 2233359 D hypothetical protein 2232730..2233359 Geobacter uraniireducens Rf4 5165137 YP_001230692.1 CDS Gura_1929 NC_009483.1 2233390 2235780 D PFAM: TPR repeat-containing protein; cellulosome anchoring protein, cohesin region; type II and III secretion system protein; NolW domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; type II and III secretion system protein 2233390..2235780 Geobacter uraniireducens Rf4 5165138 YP_001230693.1 CDS Gura_1930 NC_009483.1 2235803 2236297 D hypothetical protein 2235803..2236297 Geobacter uraniireducens Rf4 5164972 YP_001230694.1 CDS Gura_1931 NC_009483.1 2236349 2236765 D PFAM: type II secretion system protein G; type II secretion system protein G 2236349..2236765 Geobacter uraniireducens Rf4 5164973 YP_001230695.1 CDS Gura_1932 NC_009483.1 2236849 2237520 D TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; cell division ATP-binding protein FtsE 2236849..2237520 Geobacter uraniireducens Rf4 5164974 YP_001230696.1 CDS Gura_1933 NC_009483.1 2237507 2238451 D PFAM: protein of unknown function DUF214; hypothetical protein 2237507..2238451 Geobacter uraniireducens Rf4 5164626 YP_001230697.1 CDS Gura_1934 NC_009483.1 2238454 2239644 D PFAM: peptidase M23B; peptidase M23B 2238454..2239644 Geobacter uraniireducens Rf4 5164627 YP_001230698.1 CDS Gura_1935 NC_009483.1 2239713 2241047 D TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 2239713..2241047 Geobacter uraniireducens Rf4 5164628 YP_001230699.1 CDS Gura_1936 NC_009483.1 2241268 2241900 D SARP family transcriptional regulator 2241268..2241900 Geobacter uraniireducens Rf4 5166474 YP_001230700.1 CDS Gura_1937 NC_009483.1 2242127 2243713 D PFAM: Ig domain protein, group 1 domain protein; Ig domain-containing protein 2242127..2243713 Geobacter uraniireducens Rf4 5166475 YP_001230701.1 CDS Gura_1938 NC_009483.1 2243790 2245136 D hypothetical protein 2243790..2245136 Geobacter uraniireducens Rf4 5166476 YP_001230702.1 CDS Gura_1939 NC_009483.1 2245535 2248066 D catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 2245535..2248066 Geobacter uraniireducens Rf4 5164963 YP_001230703.1 CDS Gura_1940 NC_009483.1 2248313 2248957 R hypothetical protein complement(2248313..2248957) Geobacter uraniireducens Rf4 5164964 YP_001230704.1 CDS Gura_1941 NC_009483.1 2249396 2250469 D PFAM: GAF domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 2249396..2250469 Geobacter uraniireducens Rf4 5164965 YP_001230705.1 CDS Gura_1942 NC_009483.1 2250551 2250883 D TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis, HypA; hydrogenase nickel incorporation protein HypA 2250551..2250883 Geobacter uraniireducens Rf4 5164614 YP_001230706.1 CDS Gura_1943 NC_009483.1 2251128 2252264 D TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein; hydrogenase (NiFe) small subunit HydA 2251128..2252264 Geobacter uraniireducens Rf4 5164615 YP_001230707.1 CDS Gura_1944 NC_009483.1 2252248 2253183 D Fe-S ferrodoxin type component; participates in the periplasmic electron-transferring activity of hydrogenase 2; hydrogenase 2 protein HybA 2252248..2253183 Geobacter uraniireducens Rf4 5164616 YP_001230708.1 CDS Gura_1945 NC_009483.1 2253183 2254499 D HybB; cytochrome b subunit of the hydrogenase 2 enzyme, composed of HybA, B, C, and O subunits; putative hydrogenase 2 b cytochrome subunit 2253183..2254499 Geobacter uraniireducens Rf4 5165908 YP_001230709.1 CDS Gura_1946 NC_009483.1 2254748 2256430 D PFAM: nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase, large subunit 2254748..2256430 Geobacter uraniireducens Rf4 5165909 YP_001230710.1 CDS Gura_1947 NC_009483.1 2256586 2257086 D TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52, hydrogen uptake protein; hydrogenase maturation protease 2256586..2257086 Geobacter uraniireducens Rf4 5165910 YP_001230711.1 CDS Gura_1948 NC_009483.1 2257098 2257265 D TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; twin arginine-targeting protein translocase 2257098..2257265 Geobacter uraniireducens Rf4 5164184 YP_001230712.1 CDS Gura_1949 NC_009483.1 2257500 2258261 D TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; hydrogenase nickel incorporation protein HypB 2257500..2258261 Geobacter uraniireducens Rf4 5164185 YP_001230713.1 CDS Gura_1950 NC_009483.1 2258265 2260535 D TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; (NiFe) hydrogenase maturation protein HypF 2258265..2260535 Geobacter uraniireducens Rf4 5164186 YP_001230714.1 CDS Gura_1951 NC_009483.1 2260535 2260765 D TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); hydrogenase assembly chaperone HypC/HupF 2260535..2260765 Geobacter uraniireducens Rf4 5163567 YP_001230715.1 CDS Gura_1952 NC_009483.1 2261101 2262192 D TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; hydrogenase expression/formation protein HypD 2261101..2262192 Geobacter uraniireducens Rf4 5163568 YP_001230716.1 CDS Gura_1953 NC_009483.1 2262586 2263596 D TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; hydrogenase expression/formation protein HypE 2262586..2263596 Geobacter uraniireducens Rf4 5163569 YP_001230717.1 CDS Gura_1954 NC_009483.1 2263632 2263913 R PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(2263632..2263913) Geobacter uraniireducens Rf4 5163943 YP_001230718.1 CDS Gura_1955 NC_009483.1 2264081 2264476 R PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(2264081..2264476) Geobacter uraniireducens Rf4 5163944 YP_001230719.1 CDS Gura_1956 NC_009483.1 2264541 2264891 R hypothetical protein complement(2264541..2264891) Geobacter uraniireducens Rf4 5163945 YP_001230720.1 CDS Gura_1957 NC_009483.1 2265364 2266647 D catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 2265364..2266647 Geobacter uraniireducens Rf4 5163964 YP_001230721.1 CDS Gura_1958 NC_009483.1 2266647 2267981 D GTPase-like protein 2266647..2267981 Geobacter uraniireducens Rf4 5163965 YP_001230722.1 CDS Gura_1959 NC_009483.1 2268182 2269663 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 2268182..2269663 Geobacter uraniireducens Rf4 5163966 YP_001230723.1 CDS Gura_1960 NC_009483.1 2269876 2271453 R PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase complement(2269876..2271453) Geobacter uraniireducens Rf4 5165664 YP_001230724.1 CDS Gura_1961 NC_009483.1 2271655 2272977 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(2271655..2272977) Geobacter uraniireducens Rf4 5165665 YP_001230725.1 CDS Gura_1962 NC_009483.1 2273586 2274896 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(2273586..2274896) Geobacter uraniireducens Rf4 5165666 YP_001230726.1 CDS Gura_1963 NC_009483.1 2275311 2276792 D PFAM: polysaccharide biosynthesis protein; colanic acid exporter 2275311..2276792 Geobacter uraniireducens Rf4 5164020 YP_001230727.1 CDS Gura_1964 NC_009483.1 2277161 2279017 D PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, plug 2277161..2279017 Geobacter uraniireducens Rf4 5164021 YP_001230728.1 CDS Gura_1965 NC_009483.1 2279005 2279901 D ABC transporter periplasmic component-like protein 2279005..2279901 Geobacter uraniireducens Rf4 5164022 YP_001230729.1 CDS Gura_1966 NC_009483.1 2280238 2280831 D dual specificity protein phosphatase 2280238..2280831 Geobacter uraniireducens Rf4 5165142 YP_001230730.1 CDS Gura_1967 NC_009483.1 2280851 2281267 D PFAM: response regulator receiver; response regulator receiver protein 2280851..2281267 Geobacter uraniireducens Rf4 5165143 YP_001230731.1 CDS Gura_1968 NC_009483.1 2281301 2281579 D hypothetical protein 2281301..2281579 Geobacter uraniireducens Rf4 5165144 YP_001230732.1 CDS Gura_1969 NC_009483.1 2281569 2281745 D hypothetical protein 2281569..2281745 Geobacter uraniireducens Rf4 5165449 YP_001230733.1 CDS Gura_1970 NC_009483.1 2281923 2282168 D hypothetical protein 2281923..2282168 Geobacter uraniireducens Rf4 5165450 YP_001230734.1 CDS Gura_1971 NC_009483.1 2282165 2282509 D PFAM: PemK family protein; transcriptional modulator of MazE/toxin MazF 2282165..2282509 Geobacter uraniireducens Rf4 5165451 YP_001230735.1 CDS Gura_1972 NC_009483.1 2282710 2283498 D PFAM: ADP-ribosylation/Crystallin J1; ADP-ribosylation/crystallin J1 2282710..2283498 Geobacter uraniireducens Rf4 5166893 YP_001230736.1 CDS Gura_1973 NC_009483.1 2283587 2284102 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2283587..2284102) Geobacter uraniireducens Rf4 5166894 YP_001230737.1 CDS Gura_1974 NC_009483.1 2284443 2285759 D PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase 2284443..2285759 Geobacter uraniireducens Rf4 5166895 YP_001230738.1 CDS Gura_1975 NC_009483.1 2285899 2286309 D hypothetical protein 2285899..2286309 Geobacter uraniireducens Rf4 5165159 YP_001230739.1 CDS Gura_1976 NC_009483.1 2286466 2287509 D PFAM: peptidase M20; peptidase M28; peptidase M28 2286466..2287509 Geobacter uraniireducens Rf4 5165160 YP_001230740.1 CDS Gura_1977 NC_009483.1 2287513 2289105 R TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase complement(2287513..2289105) Geobacter uraniireducens Rf4 5165161 YP_001230741.1 CDS Gura_1978 NC_009483.1 2289159 2289884 R PFAM: transport-associated protein; transport-associated protein complement(2289159..2289884) Geobacter uraniireducens Rf4 5166995 YP_001230742.1 CDS Gura_1979 NC_009483.1 2290587 2291816 D TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; nuclease SbcCD subunit D 2290587..2291816 Geobacter uraniireducens Rf4 5166996 YP_001230743.1 CDS Gura_1980 NC_009483.1 2291813 2295496 D PFAM: SMC domain protein; SMC domain-containing protein 2291813..2295496 Geobacter uraniireducens Rf4 5166997 YP_001230744.1 CDS Gura_1981 NC_009483.1 2295493 2296302 D PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 2295493..2296302 Geobacter uraniireducens Rf4 5166655 YP_001230745.1 CDS Gura_1982 NC_009483.1 2296320 2296898 D aspartyl protease-like protein 2296320..2296898 Geobacter uraniireducens Rf4 5166656 YP_001230746.1 CDS Gura_1983 NC_009483.1 2297147 2297449 D hypothetical protein 2297147..2297449 Geobacter uraniireducens Rf4 5166657 YP_001230747.1 CDS Gura_1984 NC_009483.1 2297529 2297975 R hypothetical protein complement(2297529..2297975) Geobacter uraniireducens Rf4 5166531 YP_001230748.1 CDS Gura_1985 NC_009483.1 2298117 2299790 D PFAM: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 2298117..2299790 Geobacter uraniireducens Rf4 5166532 YP_001230749.1 CDS Gura_1986 NC_009483.1 2300340 2301011 D TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; two component heavy metal response transcriptional regulator 2300340..2301011 Geobacter uraniireducens Rf4 5166533 YP_001230750.1 CDS Gura_1987 NC_009483.1 2300992 2302461 D TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; heavy metal sensor signal transduction histidine kinase 2300992..2302461 Geobacter uraniireducens Rf4 5166649 YP_001230751.1 CDS Gura_1988 NC_009483.1 2302730 2303698 D hypothetical protein 2302730..2303698 Geobacter uraniireducens Rf4 5166650 YP_001230752.1 CDS Gura_1989 NC_009483.1 2303878 2305134 D hypothetical protein 2303878..2305134 Geobacter uraniireducens Rf4 5166651 YP_001230753.1 CDS Gura_1990 NC_009483.1 2305379 2306791 D TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; YVTN beta-propeller repeat-containing protein 2305379..2306791 Geobacter uraniireducens Rf4 5166727 YP_001230754.1 CDS Gura_1991 NC_009483.1 2306856 2309036 D hypothetical protein 2306856..2309036 Geobacter uraniireducens Rf4 5166728 YP_001230755.1 CDS Gura_1992 NC_009483.1 2309068 2309658 D hypothetical protein 2309068..2309658 Geobacter uraniireducens Rf4 5166729 YP_001230756.1 CDS Gura_1993 NC_009483.1 2309630 2310754 D hypothetical protein 2309630..2310754 Geobacter uraniireducens Rf4 5163081 YP_001230757.1 CDS Gura_1994 NC_009483.1 2310815 2312572 D hypothetical protein 2310815..2312572 Geobacter uraniireducens Rf4 5163082 YP_001230758.1 CDS Gura_1995 NC_009483.1 2312646 2314622 D TIGRFAM: cytochrome C family protein; cytochrome C family protein 2312646..2314622 Geobacter uraniireducens Rf4 5163083 YP_001230759.1 CDS Gura_1996 NC_009483.1 2314636 2315919 D TIGRFAM: cytochrome C family protein; cytochrome C family protein 2314636..2315919 Geobacter uraniireducens Rf4 5166950 YP_001230760.1 CDS Gura_1997 NC_009483.1 2315924 2316835 D PFAM: NHL repeat containing protein; NHL repeat-containing protein 2315924..2316835 Geobacter uraniireducens Rf4 5166951 YP_001230761.1 CDS Gura_1998 NC_009483.1 2316872 2317390 D PFAM: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 2316872..2317390 Geobacter uraniireducens Rf4 5166952 YP_001230762.1 CDS Gura_1999 NC_009483.1 2317422 2317748 D hypothetical protein 2317422..2317748 Geobacter uraniireducens Rf4 5166525 YP_001230763.1 CDS Gura_2000 NC_009483.1 2318026 2319120 R PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; response regulator receiver sensor signal transduction histidine kinase complement(2318026..2319120) Geobacter uraniireducens Rf4 5166526 YP_001230764.1 CDS Gura_2001 NC_009483.1 2319562 2320161 D PFAM: carbonic anhydrase; carbonate dehydratase 2319562..2320161 Geobacter uraniireducens Rf4 5166527 YP_001230765.1 CDS Gura_2002 NC_009483.1 2320221 2320526 D hypothetical protein 2320221..2320526 Geobacter uraniireducens Rf4 5166980 YP_001230766.1 CDS Gura_2003 NC_009483.1 2320520 2320876 D PFAM: PemK family protein; transcriptional modulator of MazE/toxin MazF 2320520..2320876 Geobacter uraniireducens Rf4 5166981 YP_001230767.1 CDS Gura_2004 NC_009483.1 2321079 2322305 D hypothetical protein 2321079..2322305 Geobacter uraniireducens Rf4 5166982 YP_001230768.1 CDS Gura_2005 NC_009483.1 2322491 2324065 D hypothetical protein 2322491..2324065 Geobacter uraniireducens Rf4 5166471 YP_001230769.1 CDS Gura_2006 NC_009483.1 2324067 2324771 R PFAM: 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase complement(2324067..2324771) Geobacter uraniireducens Rf4 5166472 YP_001230770.1 CDS Gura_2007 NC_009483.1 2324783 2325778 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; 3-beta hydroxysteroid dehydrogenase/isomerase complement(2324783..2325778) Geobacter uraniireducens Rf4 5166473 YP_001230771.1 CDS Gura_2008 NC_009483.1 2325775 2327412 R Catalyzes the specific recognition and activation of amino acids during peptide synthesis; peptide synthase complement(2325775..2327412) Geobacter uraniireducens Rf4 5166646 YP_001230772.1 CDS Gura_2009 NC_009483.1 2327434 2328318 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(2327434..2328318) Geobacter uraniireducens Rf4 5166647 YP_001230773.1 CDS Gura_2010 NC_009483.1 2328557 2329600 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(2328557..2329600) Geobacter uraniireducens Rf4 5166648 YP_001230774.1 CDS Gura_2011 NC_009483.1 2329921 2336967 R PFAM: beta-ketoacyl synthase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ complement(2329921..2336967) Geobacter uraniireducens Rf4 5164638 YP_001230775.1 CDS Gura_2012 NC_009483.1 2336970 2343866 R PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; KR; erythronolide synthase complement(2336970..2343866) Geobacter uraniireducens Rf4 5164639 YP_001230776.1 CDS Gura_2013 NC_009483.1 2343863 2345527 R PFAM: 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase complement(2343863..2345527) Geobacter uraniireducens Rf4 5164640 YP_001230777.1 CDS Gura_2014 NC_009483.1 2346224 2348938 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 2346224..2348938 Geobacter uraniireducens Rf4 5162861 YP_001230778.1 CDS Gura_2015 NC_009483.1 2348987 2349424 R hypothetical protein complement(2348987..2349424) Geobacter uraniireducens Rf4 5162862 YP_001230779.1 CDS Gura_2016 NC_009483.1 2349620 2350639 R hypothetical protein complement(2349620..2350639) Geobacter uraniireducens Rf4 5162863 YP_001230780.1 CDS Gura_2017 NC_009483.1 2351063 2352331 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 2351063..2352331 Geobacter uraniireducens Rf4 5165464 YP_001230781.1 CDS Gura_2018 NC_009483.1 2352328 2353671 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 2352328..2353671 Geobacter uraniireducens Rf4 5165465 YP_001230782.1 CDS Gura_2019 NC_009483.1 2353853 2354389 D PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; OB-fold tRNA/helicase-type nucleic acid binding protein 2353853..2354389 Geobacter uraniireducens Rf4 5165466 YP_001230783.1 CDS Gura_2020 NC_009483.1 2354445 2355326 D hypothetical protein 2354445..2355326 Geobacter uraniireducens Rf4 5166149 YP_001230784.1 CDS Gura_2021 NC_009483.1 2355564 2356454 D hypothetical protein 2355564..2356454 Geobacter uraniireducens Rf4 5166150 YP_001230785.1 CDS Gura_2022 NC_009483.1 2357088 2359139 D PFAM: Fibronectin, type III domain protein; fibronectin I domain-containing protein 2357088..2359139 Geobacter uraniireducens Rf4 5166151 YP_001230786.1 CDS Gura_2023 NC_009483.1 2359242 2362307 R TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase complement(2359242..2362307) Geobacter uraniireducens Rf4 5166094 YP_001230787.1 CDS Gura_2024 NC_009483.1 2362538 2363398 R TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; parB-like partition protein complement(2362538..2363398) Geobacter uraniireducens Rf4 5166095 YP_001230788.1 CDS Gura_2025 NC_009483.1 2364628 2365158 D TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 2364628..2365158 Geobacter uraniireducens Rf4 5165574 YP_001230789.1 CDS Gura_2026 NC_009483.1 2365239 2365643 D PFAM: cobalamin B12-binding domain protein; cobalamin B12-binding domain-containing protein 2365239..2365643 Geobacter uraniireducens Rf4 5165575 YP_001230790.1 CDS Gura_2027 NC_009483.1 2365795 2366745 D TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase; LAO/AO transport system ATPase 2365795..2366745 Geobacter uraniireducens Rf4 5165070 YP_001230791.1 CDS Gura_2028 NC_009483.1 2366839 2367675 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 2366839..2367675 Geobacter uraniireducens Rf4 5165071 YP_001230792.1 CDS Gura_2029 NC_009483.1 2367793 2368401 D hypothetical protein 2367793..2368401 Geobacter uraniireducens Rf4 5165072 YP_001230793.1 CDS Gura_2030 NC_009483.1 2368449 2369186 D TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA methyltransferase 2368449..2369186 Geobacter uraniireducens Rf4 5165362 YP_001230794.1 CDS Gura_2031 NC_009483.1 2369183 2369461 D hypothetical protein 2369183..2369461 Geobacter uraniireducens Rf4 5165363 YP_001230795.1 CDS Gura_2032 NC_009483.1 2369492 2370076 D PFAM: LemA family protein; LemA family protein 2369492..2370076 Geobacter uraniireducens Rf4 5165364 YP_001230796.1 CDS Gura_2033 NC_009483.1 2370145 2371002 D PFAM: protein of unknown function DUF477; hypothetical protein 2370145..2371002 Geobacter uraniireducens Rf4 5164760 YP_001230797.1 CDS Gura_2034 NC_009483.1 2371311 2371946 D PFAM: protein of unknown function DUF477; hypothetical protein 2371311..2371946 Geobacter uraniireducens Rf4 5164761 YP_001230798.1 CDS Gura_2035 NC_009483.1 2372305 2377095 D TIGRFAM: cytochrome C family protein; cytochrome C family protein 2372305..2377095 Geobacter uraniireducens Rf4 5164762 YP_001230799.1 CDS Gura_2036 NC_009483.1 2377143 2383349 D PFAM: Fibronectin, type III domain protein; fibronectin I domain-containing protein 2377143..2383349 Geobacter uraniireducens Rf4 5166106 YP_001230800.1 CDS Gura_2037 NC_009483.1 2383743 2384495 D TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; hemolysin A 2383743..2384495 Geobacter uraniireducens Rf4 5166107 YP_001230801.1 CDS Gura_2038 NC_009483.1 2384553 2384933 D PFAM: histidine triad (HIT) protein; histidine triad (HIT) protein 2384553..2384933 Geobacter uraniireducens Rf4 5166108 YP_001230802.1 CDS Gura_2039 NC_009483.1 2384979 2385509 D hypothetical protein 2384979..2385509 Geobacter uraniireducens Rf4 5163283 YP_001230803.1 CDS Gura_2040 NC_009483.1 2386073 2387371 R PFAM: natural resistance-associated macrophage protein; natural resistance-associated macrophage protein complement(2386073..2387371) Geobacter uraniireducens Rf4 5163284 YP_001230804.1 CDS Gura_2041 NC_009483.1 2387446 2388726 R PFAM: CBS domain containing protein; MgtE intracellular region; MgtE integral membrane protein complement(2387446..2388726) Geobacter uraniireducens Rf4 5163285 YP_001230805.1 CDS Gura_2042 NC_009483.1 2389117 2389899 D transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 2389117..2389899 Geobacter uraniireducens Rf4 5166584 YP_001230806.1 CDS Gura_2043 NC_009483.1 2389928 2390353 R PFAM: ATP-binding region, ATPase domain protein; putative anti-sigma regulatory factor complement(2389928..2390353) Geobacter uraniireducens Rf4 5166585 YP_001230807.1 CDS Gura_2044 NC_009483.1 2390373 2390708 R TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist complement(2390373..2390708) Geobacter uraniireducens Rf4 5166586 YP_001230808.1 CDS Gura_2045 NC_009483.1 2390853 2394092 R PFAM: Na+/solute symporter; GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; putative GAF sensor protein complement(2390853..2394092) Geobacter uraniireducens Rf4 5162944 YP_001230809.1 CDS Gura_2046 NC_009483.1 2394092 2394352 R hypothetical protein complement(2394092..2394352) Geobacter uraniireducens Rf4 5162945 YP_001230810.1 CDS Gura_2047 NC_009483.1 2394352 2395914 R hypothetical protein complement(2394352..2395914) Geobacter uraniireducens Rf4 5162946 YP_001230811.1 CDS Gura_2048 NC_009483.1 2396175 2397896 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein 2396175..2397896 Geobacter uraniireducens Rf4 5163087 YP_001230812.1 CDS Gura_2049 NC_009483.1 2397893 2399515 D PFAM: extracellular solute-binding protein, family 5; extracellular solute-binding protein 2397893..2399515 Geobacter uraniireducens Rf4 5163088 YP_001230813.1 CDS Gura_2050 NC_009483.1 2399516 2400493 D PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2399516..2400493 Geobacter uraniireducens Rf4 5163089 YP_001230814.1 CDS Gura_2051 NC_009483.1 2401209 2402513 D PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 2401209..2402513 Geobacter uraniireducens Rf4 5163487 YP_001230815.1 CDS Gura_2052 NC_009483.1 2402779 2403621 D PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 2402779..2403621 Geobacter uraniireducens Rf4 5163488 YP_001230816.1 CDS Gura_2053 NC_009483.1 2403733 2404254 D hypothetical protein 2403733..2404254 Geobacter uraniireducens Rf4 5163489 YP_001230817.1 CDS Gura_2054 NC_009483.1 2404233 2405126 D PFAM: protein of unknown function DUF815; hypothetical protein 2404233..2405126 Geobacter uraniireducens Rf4 5165697 YP_001230818.1 CDS Gura_2055 NC_009483.1 2405194 2406969 R TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; Oligopeptidase F; pepF/M3 family oligoendopeptidase complement(2405194..2406969) Geobacter uraniireducens Rf4 5165698 YP_001230819.1 CDS Gura_2056 NC_009483.1 2407036 2407644 R hypothetical protein complement(2407036..2407644) Geobacter uraniireducens Rf4 5165699 YP_001230820.1 CDS Gura_2057 NC_009483.1 2408064 2408624 R PFAM: outer membrane lipoprotein Slp; outer membrane lipoprotein Slp complement(2408064..2408624) Geobacter uraniireducens Rf4 5164490 YP_001230821.1 CDS secG NC_009483.1 2409168 2409572 R TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG complement(2409168..2409572) Geobacter uraniireducens Rf4 5163998 YP_001230822.1 CDS tpiA NC_009483.1 2409639 2410394 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(2409639..2410394) Geobacter uraniireducens Rf4 5165407 YP_001230823.1 CDS pgk NC_009483.1 2410515 2411714 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(2410515..2411714) Geobacter uraniireducens Rf4 5165408 YP_001230824.1 CDS Gura_2061 NC_009483.1 2411803 2412801 R TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(2411803..2412801) Geobacter uraniireducens Rf4 5165409 YP_001230825.1 CDS Gura_2062 NC_009483.1 2413079 2415172 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; PAS fold domain protein; multi-sensor signal transduction histidine kinase 2413079..2415172 Geobacter uraniireducens Rf4 5163949 YP_001230826.1 CDS Gura_2063 NC_009483.1 2415279 2416049 D PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 2415279..2416049 Geobacter uraniireducens Rf4 5163950 YP_001230827.1 CDS Gura_2064 NC_009483.1 2416176 2417471 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 2416176..2417471 Geobacter uraniireducens Rf4 5163951 YP_001230828.1 CDS Gura_2065 NC_009483.1 2417464 2418543 D PFAM: MscS Mechanosensitive ion channel; mechanosensitive ion channel MscS 2417464..2418543 Geobacter uraniireducens Rf4 5165540 YP_001230829.1 CDS Gura_2066 NC_009483.1 2418547 2421537 D TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; phosphoribosylformylglycinamidine synthase II 2418547..2421537 Geobacter uraniireducens Rf4 5165541 YP_001230830.1 CDS Gura_2067 NC_009483.1 2421568 2422392 D phosphoribosylformylglycinamidine synthase 2421568..2422392 Geobacter uraniireducens Rf4 5165542 YP_001230831.1 CDS Gura_2068 NC_009483.1 2422473 2423897 D TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase, class-II; phosphoribosyltransferase; amidophosphoribosyltransferase 2422473..2423897 Geobacter uraniireducens Rf4 5166652 YP_001230832.1 CDS Gura_2069 NC_009483.1 2423890 2424438 D TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; orotate phosphoribosyltransferase 2423890..2424438 Geobacter uraniireducens Rf4 5166653 YP_001230833.1 CDS Gura_2070 NC_009483.1 2424714 2425409 D hypothetical protein 2424714..2425409 Geobacter uraniireducens Rf4 5166654 YP_001230834.1 CDS Gura_2071 NC_009483.1 2425541 2427814 D PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; hypothetical protein 2425541..2427814 Geobacter uraniireducens Rf4 5165849 YP_001230835.1 CDS Gura_2072 NC_009483.1 2427794 2428534 R hypothetical protein complement(2427794..2428534) Geobacter uraniireducens Rf4 5165850 YP_001230836.1 CDS Gura_2073 NC_009483.1 2428807 2431065 R NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme complement(2428807..2431065) Geobacter uraniireducens Rf4 5165851 YP_001230837.1 CDS Gura_2074 NC_009483.1 2431330 2431827 D PFAM: histidine triad (HIT) protein; histidine triad (HIT) protein 2431330..2431827 Geobacter uraniireducens Rf4 5163120 YP_001230838.1 CDS Gura_2075 NC_009483.1 2431824 2432810 D PFAM: ROK family protein; ROK family protein 2431824..2432810 Geobacter uraniireducens Rf4 5163121 YP_001230839.1 CDS Gura_2076 NC_009483.1 2432835 2433923 D PFAM: phosphofructokinase; 6-phosphofructokinase 2432835..2433923 Geobacter uraniireducens Rf4 5163122 YP_001230840.1 CDS Gura_2077 NC_009483.1 2434028 2436019 D PFAM: GAF domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2434028..2436019 Geobacter uraniireducens Rf4 5166681 YP_001230841.1 CDS panB NC_009483.1 2436279 2437082 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2436279..2437082 Geobacter uraniireducens Rf4 5166682 YP_001230842.1 CDS panC NC_009483.1 2437082 2437930 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 2437082..2437930 Geobacter uraniireducens Rf4 5166683 YP_001230843.1 CDS Gura_2080 NC_009483.1 2437935 2438333 D Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 2437935..2438333 Geobacter uraniireducens Rf4 5165985 YP_001230844.1 CDS Gura_2081 NC_009483.1 2438388 2439635 D PFAM: amidohydrolase; Amidohydrolase 3; amidohydrolase 2438388..2439635 Geobacter uraniireducens Rf4 5165986 YP_001230845.1 CDS Gura_2082 NC_009483.1 2439660 2440169 D DNA uptake protein-like protein 2439660..2440169 Geobacter uraniireducens Rf4 5165987 YP_001230846.1 CDS smpB NC_009483.1 2440223 2440678 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2440223..2440678 Geobacter uraniireducens Rf4 5165852 YP_001230847.1 CDS Gura_2084 NC_009483.1 2441850 2442182 D hypothetical protein 2441850..2442182 Geobacter uraniireducens Rf4 5165854 YP_001230848.1 CDS Gura_2085 NC_009483.1 2442891 2443334 D hypothetical protein 2442891..2443334 Geobacter uraniireducens Rf4 5165283 YP_001230849.1 CDS Gura_2086 NC_009483.1 2443321 2443656 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 2443321..2443656 Geobacter uraniireducens Rf4 5165284 YP_001230850.1 CDS Gura_2087 NC_009483.1 2443720 2443983 D PFAM: protein of unknown function UPF0270; hypothetical protein 2443720..2443983 Geobacter uraniireducens Rf4 5165991 YP_001230851.1 CDS Gura_2088 NC_009483.1 2444249 2444431 D hypothetical protein 2444249..2444431 Geobacter uraniireducens Rf4 5165992 YP_001230852.1 CDS Gura_2089 NC_009483.1 2444604 2445776 D hypothetical protein 2444604..2445776 Geobacter uraniireducens Rf4 5165993 YP_001230853.1 CDS Gura_2090 NC_009483.1 2445773 2446549 D PFAM: phage Gp37Gp68 family protein; phage Gp37Gp68 family protein 2445773..2446549 Geobacter uraniireducens Rf4 5163865 YP_001230854.1 CDS Gura_2091 NC_009483.1 2446546 2446731 D hypothetical protein 2446546..2446731 Geobacter uraniireducens Rf4 5163866 YP_001230855.1 CDS Gura_2092 NC_009483.1 2446918 2447265 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 2446918..2447265 Geobacter uraniireducens Rf4 5163867 YP_001230856.1 CDS Gura_2093 NC_009483.1 2447268 2448506 D PFAM: HipA domain protein; HipA domain-containing protein 2447268..2448506 Geobacter uraniireducens Rf4 5164217 YP_001230857.1 CDS Gura_2094 NC_009483.1 2448979 2449161 D hypothetical protein 2448979..2449161 Geobacter uraniireducens Rf4 5164218 YP_001230858.1 CDS Gura_2095 NC_009483.1 2449291 2450811 D PFAM: putative RNA methylase; N-6 DNA methylase; N-6 DNA methylase 2449291..2450811 Geobacter uraniireducens Rf4 5164219 YP_001230859.1 CDS Gura_2096 NC_009483.1 2450808 2451200 R hypothetical protein complement(2450808..2451200) Geobacter uraniireducens Rf4 5163785 YP_001230860.1 CDS Gura_2097 NC_009483.1 2451311 2452492 D PFAM: restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit 2451311..2452492 Geobacter uraniireducens Rf4 5163786 YP_001230861.1 CDS Gura_2098 NC_009483.1 2452726 2452977 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein 2452726..2452977 Geobacter uraniireducens Rf4 5163787 YP_001230862.1 CDS Gura_2099 NC_009483.1 2452974 2453231 D TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; addiction module antitoxin 2452974..2453231 Geobacter uraniireducens Rf4 5163177 YP_001230863.1 CDS Gura_2102 NC_009483.1 2455907 2456164 D hypothetical protein 2455907..2456164 Geobacter uraniireducens Rf4 5165772 YP_001230864.1 CDS Gura_2103 NC_009483.1 2456246 2457028 D PFAM: DNA topoisomerase, type IA, zn finger domain protein; DNA topoisomerase type IA Zn finger domain-containing protein 2456246..2457028 Geobacter uraniireducens Rf4 5165773 YP_001230865.1 CDS Gura_2104 NC_009483.1 2457172 2457471 D PFAM: protein of unknown function DUF167; hypothetical protein 2457172..2457471 Geobacter uraniireducens Rf4 5165774 YP_001230866.1 CDS Gura_2105 NC_009483.1 2457506 2458036 D PFAM: nitroreductase; nitroreductase 2457506..2458036 Geobacter uraniireducens Rf4 5164223 YP_001230867.1 CDS Gura_2106 NC_009483.1 2458076 2458492 D PFAM: protein of unknown function UPF0047; hypothetical protein 2458076..2458492 Geobacter uraniireducens Rf4 5164224 YP_001230868.1 CDS Gura_2107 NC_009483.1 2458531 2459049 R hypothetical protein complement(2458531..2459049) Geobacter uraniireducens Rf4 5164225 YP_001230869.1 CDS Gura_2108 NC_009483.1 2459053 2459622 R hypothetical protein complement(2459053..2459622) Geobacter uraniireducens Rf4 5164372 YP_001230870.1 CDS Gura_2109 NC_009483.1 2459927 2460388 R hypothetical protein complement(2459927..2460388) Geobacter uraniireducens Rf4 5164373 YP_001230871.1 CDS Gura_2110 NC_009483.1 2460672 2461376 D hypothetical protein 2460672..2461376 Geobacter uraniireducens Rf4 5164374 YP_001230872.1 CDS Gura_2111 NC_009483.1 2461839 2463887 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 2461839..2463887 Geobacter uraniireducens Rf4 5163349 YP_001230873.1 CDS Gura_2112 NC_009483.1 2464249 2466642 R PFAM: DEAD_2 domain protein; SMART: DEXDc2; helicase c2; DEAD-like helicases-like; DEAD/DEAH box helicase complement(2464249..2466642) Geobacter uraniireducens Rf4 5163350 YP_001230874.1 CDS Gura_2113 NC_009483.1 2467074 2469035 D hypothetical protein 2467074..2469035 Geobacter uraniireducens Rf4 5163351 YP_001230875.1 CDS Gura_2114 NC_009483.1 2469483 2471027 D PFAM: peptidase S10, serine carboxypeptidase; peptidase S10, serine carboxypeptidase 2469483..2471027 Geobacter uraniireducens Rf4 5166289 YP_001230876.1 CDS Gura_2115 NC_009483.1 2471051 2472865 D PFAM: extracellular solute-binding protein, family 3; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 2471051..2472865 Geobacter uraniireducens Rf4 5166290 YP_001230877.1 CDS Gura_2116 NC_009483.1 2472862 2474280 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 2472862..2474280 Geobacter uraniireducens Rf4 5166291 YP_001230878.1 CDS Gura_2117 NC_009483.1 2474329 2475102 R TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein complement(2474329..2475102) Geobacter uraniireducens Rf4 5166832 YP_001230879.1 CDS Gura_2118 NC_009483.1 2475108 2476826 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; signal transduction histidine kinase complement(2475108..2476826) Geobacter uraniireducens Rf4 5166833 YP_001230880.1 CDS Gura_2119 NC_009483.1 2476823 2478031 R PFAM: domain of unknown function DUF1745; hypothetical protein complement(2476823..2478031) Geobacter uraniireducens Rf4 5166834 YP_001230881.1 CDS Gura_2120 NC_009483.1 2478451 2479776 D functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; anaerobic C4-dicarboxylate transporter 2478451..2479776 Geobacter uraniireducens Rf4 5165751 YP_001230882.1 CDS Gura_2121 NC_009483.1 2480014 2480382 D PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; putative 6-pyruvoyl tetrahydropterin synthase 2480014..2480382 Geobacter uraniireducens Rf4 5165752 YP_001230883.1 CDS Gura_2122 NC_009483.1 2480375 2481127 D PFAM: Radical SAM domain protein; radical SAM domain-containing protein 2480375..2481127 Geobacter uraniireducens Rf4 5165753 YP_001230884.1 CDS Gura_2123 NC_009483.1 2481138 2481857 D PFAM: Creatininase; creatininase 2481138..2481857 Geobacter uraniireducens Rf4 5163215 YP_001230885.1 CDS Gura_2124 NC_009483.1 2482212 2483516 R phenylacetate--CoA ligase complement(2482212..2483516) Geobacter uraniireducens Rf4 5163216 YP_001230886.1 CDS Gura_2125 NC_009483.1 2483560 2484303 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2483560..2484303) Geobacter uraniireducens Rf4 5163217 YP_001230887.1 CDS Gura_2126 NC_009483.1 2484474 2484893 D PFAM: transposase IS200-family protein; transposase IS200-family protein 2484474..2484893 Geobacter uraniireducens Rf4 5166611 YP_001230888.1 CDS Gura_2127 NC_009483.1 2484998 2485750 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2484998..2485750) Geobacter uraniireducens Rf4 5166612 YP_001230889.1 CDS Gura_2128 NC_009483.1 2485743 2486756 R PFAM: inner-membrane translocator; inner-membrane translocator complement(2485743..2486756) Geobacter uraniireducens Rf4 5166613 YP_001230890.1 CDS Gura_2129 NC_009483.1 2486737 2487621 R PFAM: inner-membrane translocator; inner-membrane translocator complement(2486737..2487621) Geobacter uraniireducens Rf4 5164453 YP_001230891.1 CDS Gura_2130 NC_009483.1 2487843 2488985 R PFAM: Extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(2487843..2488985) Geobacter uraniireducens Rf4 5164454 YP_001230892.1 CDS Gura_2131 NC_009483.1 2489003 2490142 R PFAM: Extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(2489003..2490142) Geobacter uraniireducens Rf4 5164455 YP_001230893.1 CDS Gura_2132 NC_009483.1 2490168 2490599 R PFAM: amino acid-binding ACT domain protein; amino acid-binding ACT domain-containing protein complement(2490168..2490599) Geobacter uraniireducens Rf4 5166534 YP_001230894.1 CDS Gura_2133 NC_009483.1 2490625 2491929 R phenylacetate--CoA ligase complement(2490625..2491929) Geobacter uraniireducens Rf4 5166535 YP_001230895.1 CDS Gura_2134 NC_009483.1 2491993 2492574 R Involved in the incorporation of exogenous aryl acids in the biosynthesis of aromatic amino acids: catalysis of the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.; indolepyruvate oxidoreductase subunit beta complement(2491993..2492574) Geobacter uraniireducens Rf4 5166536 YP_001230896.1 CDS Gura_2135 NC_009483.1 2492571 2494322 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate binding domain-containing protein complement(2492571..2494322) Geobacter uraniireducens Rf4 5164474 YP_001230897.1 CDS Gura_2136 NC_009483.1 2494591 2494854 D hypothetical protein 2494591..2494854 Geobacter uraniireducens Rf4 5164475 YP_001230898.1 CDS Gura_2137 NC_009483.1 2494919 2495830 R PFAM: Ppx/GppA phosphatase; Ppx/GppA phosphatase complement(2494919..2495830) Geobacter uraniireducens Rf4 5164476 YP_001230899.1 CDS Gura_2138 NC_009483.1 2495830 2497515 R PFAM: Na+/Pi-cotransporter; Na+/Pi-cotransporter complement(2495830..2497515) Geobacter uraniireducens Rf4 5166031 YP_001230900.1 CDS Gura_2139 NC_009483.1 2497534 2498172 R hypothetical protein complement(2497534..2498172) Geobacter uraniireducens Rf4 5166032 YP_001230901.1 CDS Gura_2140 NC_009483.1 2498208 2498636 R hypothetical protein complement(2498208..2498636) Geobacter uraniireducens Rf4 5166033 YP_001230902.1 CDS Gura_2141 NC_009483.1 2498633 2500195 R PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein complement(2498633..2500195) Geobacter uraniireducens Rf4 5166058 YP_001230903.1 CDS Gura_2142 NC_009483.1 2500323 2500598 R PFAM: histone family protein DNA-binding protein; histone family protein DNA-binding protein complement(2500323..2500598) Geobacter uraniireducens Rf4 5166059 YP_001230904.1 CDS Gura_2143 NC_009483.1 2500654 2501688 R hypothetical protein complement(2500654..2501688) Geobacter uraniireducens Rf4 5166060 YP_001230905.1 CDS Gura_2144 NC_009483.1 2501719 2503038 R TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; RNA methyltransferase complement(2501719..2503038) Geobacter uraniireducens Rf4 5166608 YP_001230906.1 CDS Gura_2145 NC_009483.1 2503031 2503390 R hypothetical protein complement(2503031..2503390) Geobacter uraniireducens Rf4 5166609 YP_001230907.1 CDS infA NC_009483.1 2503647 2503865 D stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 2503647..2503865 Geobacter uraniireducens Rf4 5166610 YP_001230908.1 CDS Gura_2147 NC_009483.1 2504041 2504604 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2504041..2504604 Geobacter uraniireducens Rf4 5166704 YP_001230909.1 CDS Gura_2148 NC_009483.1 2504608 2505531 D PFAM: tRNA synthetase, class II (D, K and N); tRNA synthetase 2504608..2505531 Geobacter uraniireducens Rf4 5166705 YP_001230910.1 CDS Gura_2149 NC_009483.1 2505548 2506591 R TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; lysine 2,3-aminomutase YodO family protein complement(2505548..2506591) Geobacter uraniireducens Rf4 5166706 YP_001230911.1 CDS Gura_2150 NC_009483.1 2506679 2507596 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B complement(2506679..2507596) Geobacter uraniireducens Rf4 5165784 YP_001230912.1 CDS Gura_2151 NC_009483.1 2507635 2508450 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding subunit complement(2507635..2508450) Geobacter uraniireducens Rf4 5165785 YP_001230913.1 CDS Gura_2152 NC_009483.1 2508471 2508932 R TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ribosomal-protein-alanine acetyltransferase complement(2508471..2508932) Geobacter uraniireducens Rf4 5165786 YP_001230914.1 CDS Gura_2153 NC_009483.1 2509054 2510100 D catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 2509054..2510100 Geobacter uraniireducens Rf4 5165875 YP_001230915.1 CDS Gura_2154 NC_009483.1 2510133 2510753 D TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; phosphoribosylglycinamide formyltransferase 2510133..2510753 Geobacter uraniireducens Rf4 5165876 YP_001230916.1 CDS Gura_2155 NC_009483.1 2510783 2511226 R PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(2510783..2511226) Geobacter uraniireducens Rf4 5165877 YP_001230917.1 CDS Gura_2156 NC_009483.1 2512349 2513752 D PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 2512349..2513752 Geobacter uraniireducens Rf4 5166564 YP_001230918.1 CDS Gura_2158 NC_009483.1 2514273 2515487 D PFAM: transposase, mutator type; transposase, mutator type 2514273..2515487 Geobacter uraniireducens Rf4 5165115 YP_001230919.1 CDS Gura_2159 NC_009483.1 2515639 2516652 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(2515639..2516652) Geobacter uraniireducens Rf4 5165116 YP_001230920.1 CDS Gura_2160 NC_009483.1 2516844 2517122 R hypothetical protein complement(2516844..2517122) Geobacter uraniireducens Rf4 5165117 YP_001230921.1 CDS Gura_2161 NC_009483.1 2517302 2518621 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; Sporulation domain protein; ErfK/YbiS/YcfS/YnhG family protein complement(2517302..2518621) Geobacter uraniireducens Rf4 5164783 YP_001230922.1 CDS Gura_2162 NC_009483.1 2519911 2520939 R TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II complement(2519911..2520939) Geobacter uraniireducens Rf4 5164784 YP_001230923.1 CDS Gura_2163 NC_009483.1 2520953 2522296 R PFAM: cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I complement(2520953..2522296) Geobacter uraniireducens Rf4 5164785 YP_001230924.1 CDS Gura_2164 NC_009483.1 2522458 2522871 R TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator complement(2522458..2522871) Geobacter uraniireducens Rf4 5164422 YP_001230925.1 CDS Gura_2165 NC_009483.1 2523043 2524131 R regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase complement(2523043..2524131) Geobacter uraniireducens Rf4 5164423 YP_001230926.1 CDS Gura_2166 NC_009483.1 2524192 2525070 R PFAM: MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase complement(2524192..2525070) Geobacter uraniireducens Rf4 5164424 YP_001230927.1 CDS Gura_2167 NC_009483.1 2525100 2526857 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; methyl-accepting chemotaxis sensory transducer complement(2525100..2526857) Geobacter uraniireducens Rf4 5164496 YP_001230928.1 CDS Gura_2168 NC_009483.1 2526889 2527380 R PFAM: CheW domain protein; putative CheW protein complement(2526889..2527380) Geobacter uraniireducens Rf4 5164497 YP_001230929.1 CDS Gura_2169 NC_009483.1 2527425 2529548 R PFAM: CheW domain protein; ATP-binding region, ATPase domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; CheA signal transduction histidine kinase complement(2527425..2529548) Geobacter uraniireducens Rf4 5164498 YP_001230930.1 CDS Gura_2170 NC_009483.1 2529545 2529985 R hypothetical protein complement(2529545..2529985) Geobacter uraniireducens Rf4 5165139 YP_001230931.1 CDS Gura_2171 NC_009483.1 2530462 2531904 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator complement(2530462..2531904) Geobacter uraniireducens Rf4 5165140 YP_001230932.1 CDS Gura_2172 NC_009483.1 2531952 2533172 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(2531952..2533172) Geobacter uraniireducens Rf4 5165141 YP_001230933.1 CDS Gura_2173 NC_009483.1 2533348 2534613 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein complement(2533348..2534613) Geobacter uraniireducens Rf4 5164002 YP_001230934.1 CDS Gura_2174 NC_009483.1 2534629 2534919 R PFAM: heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein complement(2534629..2534919) Geobacter uraniireducens Rf4 5164003 YP_001230935.1 CDS Gura_2175 NC_009483.1 2535062 2536924 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(2535062..2536924) Geobacter uraniireducens Rf4 5164004 YP_001230936.1 CDS Gura_2176 NC_009483.1 2536936 2537829 R PFAM: Polyprenyl synthetase; polyprenyl synthetase complement(2536936..2537829) Geobacter uraniireducens Rf4 5163541 YP_001230937.1 CDS Gura_2177 NC_009483.1 2537866 2538096 R catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit complement(2537866..2538096) Geobacter uraniireducens Rf4 5163542 YP_001230938.1 CDS Gura_2178 NC_009483.1 2538340 2539650 R catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase complement(2538340..2539650) Geobacter uraniireducens Rf4 5163543 YP_001230939.1 CDS Gura_2179 NC_009483.1 2539702 2540139 R TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; NusB antitermination factor complement(2539702..2540139) Geobacter uraniireducens Rf4 5163256 YP_001230940.1 CDS ribH NC_009483.1 2540139 2540606 R RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase complement(2540139..2540606) Geobacter uraniireducens Rf4 5163257 YP_001230941.1 CDS Gura_2181 NC_009483.1 2540634 2541836 R PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; GTP cyclohydrolase II complement(2540634..2541836) Geobacter uraniireducens Rf4 5163258 YP_001230942.1 CDS Gura_2182 NC_009483.1 2541919 2542566 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(2541919..2542566) Geobacter uraniireducens Rf4 5164297 YP_001230943.1 CDS Gura_2183 NC_009483.1 2542551 2543657 R TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein; riboflavin biosynthesis protein RibD complement(2542551..2543657) Geobacter uraniireducens Rf4 5164298 YP_001230944.1 CDS nrdR NC_009483.1 2543699 2544151 R PFAM: ATP-cone domain protein; transcriptional regulator NrdR complement(2543699..2544151) Geobacter uraniireducens Rf4 5164299 YP_001230945.1 CDS Gura_2185 NC_009483.1 2544148 2544618 R PFAM: CMP/dCMP deaminase, zinc-binding; dCMP deaminase complement(2544148..2544618) Geobacter uraniireducens Rf4 5162724 YP_001230946.1 CDS Gura_2186 NC_009483.1 2544759 2545490 R hypothetical protein complement(2544759..2545490) Geobacter uraniireducens Rf4 5162725 YP_001230947.1 CDS Gura_2187 NC_009483.1 2545510 2546466 R hypothetical protein complement(2545510..2546466) Geobacter uraniireducens Rf4 5162726 YP_001230948.1 CDS Gura_2188 NC_009483.1 2546546 2547733 R PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(2546546..2547733) Geobacter uraniireducens Rf4 5166597 YP_001230949.1 CDS Gura_2189 NC_009483.1 2547907 2548452 R PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase complement(2547907..2548452) Geobacter uraniireducens Rf4 5166598 YP_001230950.1 CDS Gura_2190 NC_009483.1 2548477 2549295 R catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta complement(2548477..2549295) Geobacter uraniireducens Rf4 5166599 YP_001230951.1 CDS Gura_2191 NC_009483.1 2549298 2550431 R PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha complement(2549298..2550431) Geobacter uraniireducens Rf4 5162775 YP_001230952.1 CDS Gura_2192 NC_009483.1 2550455 2550649 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(2550455..2550649) Geobacter uraniireducens Rf4 5162776 YP_001230953.1 CDS Gura_2193 NC_009483.1 2550831 2551787 R Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase complement(2550831..2551787) Geobacter uraniireducens Rf4 5162777 YP_001230954.1 CDS Gura_2194 NC_009483.1 2551832 2554063 R TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; isocitrate dehydrogenase complement(2551832..2554063) Geobacter uraniireducens Rf4 5163859 YP_001230955.1 CDS Gura_2195 NC_009483.1 2554406 2555122 R PFAM: Peptidoglycan-binding LysM; peptidoglycan-binding LysM complement(2554406..2555122) Geobacter uraniireducens Rf4 5163860 YP_001230956.1 CDS aspS NC_009483.1 2555132 2556913 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(2555132..2556913) Geobacter uraniireducens Rf4 5163861 YP_001230957.1 CDS Gura_2197 NC_009483.1 2557074 2557793 R PFAM: regulatory protein GntR, HTH; GntR domain protein; GntR family transcriptional regulator complement(2557074..2557793) Geobacter uraniireducens Rf4 5162718 YP_001230958.1 CDS Gura_2198 NC_009483.1 2557869 2559110 R PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein complement(2557869..2559110) Geobacter uraniireducens Rf4 5162719 YP_001230959.1 CDS Gura_2199 NC_009483.1 2559192 2560565 R PFAM: FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein complement(2559192..2560565) Geobacter uraniireducens Rf4 5162720 YP_001230960.1 CDS Gura_2200 NC_009483.1 2560651 2562600 R TIGRFAM: L-lactate transport; PFAM: L-lactate permease; L-lactate transport complement(2560651..2562600) Geobacter uraniireducens Rf4 5164992 YP_001230961.1 CDS Gura_2203 NC_009483.1 2564185 2564718 D hypothetical protein 2564185..2564718 Geobacter uraniireducens Rf4 5166349 YP_001230962.1 CDS Gura_2204 NC_009483.1 2564715 2565740 D PFAM: Integrase, catalytic region; integrase catalytic subunit 2564715..2565740 Geobacter uraniireducens Rf4 5166350 YP_001230963.1 CDS Gura_2205 NC_009483.1 2565808 2566779 R TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 36K type complement(2565808..2566779) Geobacter uraniireducens Rf4 5166351 YP_001230964.1 CDS Gura_2206 NC_009483.1 2566865 2567311 R hypothetical protein complement(2566865..2567311) Geobacter uraniireducens Rf4 5166444 YP_001230965.1 CDS Gura_2207 NC_009483.1 2567490 2567969 R PFAM: Desulfoferrodoxin, ferrous iron-binding region; desulfoferrodoxin, ferrous iron-binding region complement(2567490..2567969) Geobacter uraniireducens Rf4 5166445 YP_001230966.1 CDS Gura_2208 NC_009483.1 2568156 2569040 D PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 2568156..2569040 Geobacter uraniireducens Rf4 5166446 YP_001230967.1 CDS Gura_2209 NC_009483.1 2569062 2569391 R hypothetical protein complement(2569062..2569391) Geobacter uraniireducens Rf4 5165595 YP_001230968.1 CDS Gura_2210 NC_009483.1 2570134 2571318 R hypothetical protein complement(2570134..2571318) Geobacter uraniireducens Rf4 5165596 YP_001230969.1 CDS Gura_2211 NC_009483.1 2571329 2571823 R hypothetical protein complement(2571329..2571823) Geobacter uraniireducens Rf4 5165597 YP_001230970.1 CDS Gura_2212 NC_009483.1 2571804 2573534 R PFAM: UBA/THIF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein complement(2571804..2573534) Geobacter uraniireducens Rf4 5165869 YP_001230971.1 CDS Gura_2213 NC_009483.1 2573527 2574567 R hypothetical protein complement(2573527..2574567) Geobacter uraniireducens Rf4 5165870 YP_001230972.1 CDS Gura_2214 NC_009483.1 2574594 2574884 R hypothetical protein complement(2574594..2574884) Geobacter uraniireducens Rf4 5165871 YP_001230973.1 CDS Gura_2215 NC_009483.1 2574893 2575408 R PFAM: protein of unknown function DUF955; hypothetical protein complement(2574893..2575408) Geobacter uraniireducens Rf4 5164462 YP_001230974.1 CDS Gura_2216 NC_009483.1 2575405 2576292 R hypothetical protein complement(2575405..2576292) Geobacter uraniireducens Rf4 5164463 YP_001230975.1 CDS Gura_2217 NC_009483.1 2576304 2576642 R hypothetical protein complement(2576304..2576642) Geobacter uraniireducens Rf4 5164464 YP_001230976.1 CDS Gura_2218 NC_009483.1 2577532 2577750 R hypothetical protein complement(2577532..2577750) Geobacter uraniireducens Rf4 5166811 YP_001230977.1 CDS Gura_2220 NC_009483.1 2578094 2579704 R hypothetical protein complement(2578094..2579704) Geobacter uraniireducens Rf4 5166813 YP_001230978.1 CDS Gura_2221 NC_009483.1 2579779 2579907 R hypothetical protein complement(2579779..2579907) Geobacter uraniireducens Rf4 5164480 YP_001230979.1 CDS Gura_2222 NC_009483.1 2579989 2580669 R hypothetical protein complement(2579989..2580669) Geobacter uraniireducens Rf4 5164481 YP_001230980.1 CDS Gura_2224 NC_009483.1 2581561 2581926 R hypothetical protein complement(2581561..2581926) Geobacter uraniireducens Rf4 5163430 YP_001230981.1 CDS Gura_2225 NC_009483.1 2582096 2583130 R hypothetical protein complement(2582096..2583130) Geobacter uraniireducens Rf4 5164115 YP_001230982.1 CDS Gura_2226 NC_009483.1 2583234 2584169 R PFAM: glutamyl-tRNA synthetase, class Ic; glutamyl-tRNA synthetase complement(2583234..2584169) Geobacter uraniireducens Rf4 5164116 YP_001230983.1 CDS Gura_2227 NC_009483.1 2584270 2584584 R PFAM: protein of unknown function DUF1255; hypothetical protein complement(2584270..2584584) Geobacter uraniireducens Rf4 5164117 YP_001230984.1 CDS Gura_2228 NC_009483.1 2584776 2586188 R TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; glutamine synthetase complement(2584776..2586188) Geobacter uraniireducens Rf4 5163605 YP_001230985.1 CDS Gura_2229 NC_009483.1 2586224 2586562 R PFAM: nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(2586224..2586562) Geobacter uraniireducens Rf4 5163606 YP_001230986.1 CDS Gura_2230 NC_009483.1 2586848 2587765 R catalyzes the formation of 2-dehydropantoate from (R)-pantoate; 2-dehydropantoate 2-reductase complement(2586848..2587765) Geobacter uraniireducens Rf4 5163607 YP_001230987.1 CDS Gura_2231 NC_009483.1 2587926 2588669 D PFAM: peptidase M23B; peptidase M23B 2587926..2588669 Geobacter uraniireducens Rf4 5163055 YP_001230988.1 CDS Gura_2232 NC_009483.1 2588698 2591226 R TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent, C-terminal domain protein; SMART: DEAD-like helicases-like; ATP-dependent helicase HrpB complement(2588698..2591226) Geobacter uraniireducens Rf4 5163056 YP_001230989.1 CDS Gura_2233 NC_009483.1 2591240 2591917 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase complement(2591240..2591917) Geobacter uraniireducens Rf4 5163057 YP_001230990.1 CDS Gura_2234 NC_009483.1 2591999 2592805 R PFAM: phosphoesterase, PA-phosphatase related; PA-phosphatase-like protein complement(2591999..2592805) Geobacter uraniireducens Rf4 5162636 YP_001230991.1 CDS Gura_2235 NC_009483.1 2592875 2594065 R PFAM: lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein complement(2592875..2594065) Geobacter uraniireducens Rf4 5162637 YP_001230992.1 CDS Gura_2236 NC_009483.1 2594078 2596924 R PFAM: polysaccharide export protein; Fibronectin, type III domain protein; polysaccharide export protein complement(2594078..2596924) Geobacter uraniireducens Rf4 5162638 YP_001230993.1 CDS Gura_2237 NC_009483.1 2597424 2597969 R PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase complement(2597424..2597969) Geobacter uraniireducens Rf4 5164571 YP_001230994.1 CDS Gura_2238 NC_009483.1 2598024 2598767 R PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate binding domain-containing protein complement(2598024..2598767) Geobacter uraniireducens Rf4 5164572 YP_001230995.1 CDS Gura_2239 NC_009483.1 2598907 2599962 R catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; 2-ketoisovalerate ferredoxin reductase complement(2598907..2599962) Geobacter uraniireducens Rf4 5162624 YP_001230996.1 CDS Gura_2240 NC_009483.1 2600084 2600287 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(2600084..2600287) Geobacter uraniireducens Rf4 5162625 YP_001230997.1 CDS Gura_2241 NC_009483.1 2600480 2601049 D PFAM: ROSMUCR transcriptional regulator; MucR family transcriptional regulator 2600480..2601049 Geobacter uraniireducens Rf4 5162626 YP_001230998.1 CDS Gura_2242 NC_009483.1 2601257 2602246 D TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 2601257..2602246 Geobacter uraniireducens Rf4 5166684 YP_001230999.1 CDS Gura_2243 NC_009483.1 2602328 2603059 D TIGRFAM: dethiobiotin synthase; dethiobiotin synthase 2602328..2603059 Geobacter uraniireducens Rf4 5166685 YP_001231000.1 CDS Gura_2244 NC_009483.1 2603090 2604457 D TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2603090..2604457 Geobacter uraniireducens Rf4 5166686 YP_001231001.1 CDS Gura_2245 NC_009483.1 2604647 2605039 R hypothetical protein complement(2604647..2605039) Geobacter uraniireducens Rf4 5162906 YP_001231002.1 CDS Gura_2246 NC_009483.1 2605322 2607949 R PFAM: CBS domain containing protein; phosphoesterase, RecJ domain protein; Polynucleotide adenylyltransferase region; phosphoesterase, DHHA1; hypothetical protein complement(2605322..2607949) Geobacter uraniireducens Rf4 5162907 YP_001231003.1 CDS Gura_2247 NC_009483.1 2607949 2608752 R PFAM: protein of unknown function DUF52; hypothetical protein complement(2607949..2608752) Geobacter uraniireducens Rf4 5162908 YP_001231004.1 CDS Gura_2248 NC_009483.1 2608892 2609461 R TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; putative transcriptional regulator complement(2608892..2609461) Geobacter uraniireducens Rf4 5163402 YP_001231005.1 CDS Gura_2249 NC_009483.1 2609442 2610263 R PFAM: chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA complement(2609442..2610263) Geobacter uraniireducens Rf4 5163403 YP_001231006.1 CDS Gura_2250 NC_009483.1 2610332 2611315 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(2610332..2611315) Geobacter uraniireducens Rf4 5163404 YP_001231007.1 CDS Gura_2251 NC_009483.1 2611457 2612137 R PFAM: peptidase M50; peptidase M50 complement(2611457..2612137) Geobacter uraniireducens Rf4 5162691 YP_001231008.1 CDS Gura_2252 NC_009483.1 2612343 2614616 D PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; RNA-binding S1 domain-containing protein 2612343..2614616 Geobacter uraniireducens Rf4 5162692 YP_001231009.1 CDS Gura_2253 NC_009483.1 2614699 2615139 R hypothetical protein complement(2614699..2615139) Geobacter uraniireducens Rf4 5162693 YP_001231010.1 CDS Gura_2254 NC_009483.1 2615586 2618621 R PFAM: PKD domain containing protein; PKD domain-containing protein complement(2615586..2618621) Geobacter uraniireducens Rf4 5162700 YP_001231011.1 CDS Gura_2255 NC_009483.1 2619382 2619987 R hydrolyzes non-standard nucleotides such as xanthine and inosine; nucleoside-triphosphatase complement(2619382..2619987) Geobacter uraniireducens Rf4 5163435 YP_001231012.1 CDS rph NC_009483.1 2619984 2620700 R RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH complement(2619984..2620700) Geobacter uraniireducens Rf4 5163070 YP_001231013.1 CDS Gura_2257 NC_009483.1 2620843 2622090 R hypothetical protein complement(2620843..2622090) Geobacter uraniireducens Rf4 5163071 YP_001231014.1 CDS Gura_2258 NC_009483.1 2622105 2623166 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; diguanylate cyclase complement(2622105..2623166) Geobacter uraniireducens Rf4 5162843 YP_001231015.1 CDS Gura_2259 NC_009483.1 2623408 2625636 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2623408..2625636 Geobacter uraniireducens Rf4 5162844 YP_001231016.1 CDS Gura_2260 NC_009483.1 2625837 2626460 D hypothetical protein 2625837..2626460 Geobacter uraniireducens Rf4 5162845 YP_001231017.1 CDS Gura_2261 NC_009483.1 2626493 2626723 D PFAM: helix-turn-helix domain protein; XRE family plasmid maintenance system antidote protein 2626493..2626723 Geobacter uraniireducens Rf4 5163238 YP_001231018.1 CDS Gura_2263 NC_009483.1 2627278 2627754 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2627278..2627754 Geobacter uraniireducens Rf4 5163240 YP_001231019.1 CDS Gura_2264 NC_009483.1 2627961 2628428 D hypothetical protein 2627961..2628428 Geobacter uraniireducens Rf4 5163553 YP_001231020.1 CDS Gura_2266 NC_009483.1 2628987 2630228 D PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 2628987..2630228 Geobacter uraniireducens Rf4 5163555 YP_001231021.1 CDS Gura_2267 NC_009483.1 2630872 2631318 D DNA-binding protein 2630872..2631318 Geobacter uraniireducens Rf4 5162604 YP_001231022.1 CDS Gura_2268 NC_009483.1 2631409 2631762 D hypothetical protein 2631409..2631762 Geobacter uraniireducens Rf4 5162605 YP_001231023.1 CDS Gura_2270 NC_009483.1 2632583 2633209 D PFAM: Allergen V5/Tpx-1 family protein; Allergen V5/Tpx-1 family protein 2632583..2633209 Geobacter uraniireducens Rf4 5164274 YP_001231024.1 CDS Gura_2271 NC_009483.1 2633251 2633742 D hypothetical protein 2633251..2633742 Geobacter uraniireducens Rf4 5164275 YP_001231025.1 CDS Gura_2272 NC_009483.1 2633925 2634224 D PFAM: protein of unknown function DUF497; hypothetical protein 2633925..2634224 Geobacter uraniireducens Rf4 5164276 YP_001231026.1 CDS Gura_2273 NC_009483.1 2634193 2634465 D hypothetical protein 2634193..2634465 Geobacter uraniireducens Rf4 5163075 YP_001231027.1 CDS Gura_2274 NC_009483.1 2634517 2635629 D putative virion core protein (lumpy skin disease virus)-like protein 2634517..2635629 Geobacter uraniireducens Rf4 5163076 YP_001231028.1 CDS Gura_2275 NC_009483.1 2635708 2636412 D hypothetical protein 2635708..2636412 Geobacter uraniireducens Rf4 5163077 YP_001231029.1 CDS Gura_2276 NC_009483.1 2636476 2637258 D PFAM: amidohydrolase 2; amidohydrolase 2 2636476..2637258 Geobacter uraniireducens Rf4 5164262 YP_001231030.1 CDS Gura_2277 NC_009483.1 2637380 2637952 D PFAM: Rubrerythrin; rubrerythrin 2637380..2637952 Geobacter uraniireducens Rf4 5164263 YP_001231031.1 CDS Gura_2278 NC_009483.1 2638103 2638372 D PFAM: Excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C 2638103..2638372 Geobacter uraniireducens Rf4 5164264 YP_001231032.1 CDS Gura_2279 NC_009483.1 2638452 2639588 D PFAM: General secretory system II, protein E domain protein; general secretion pathway protein E 2638452..2639588 Geobacter uraniireducens Rf4 5164477 YP_001231033.1 CDS Gura_2280 NC_009483.1 2639706 2640059 R PFAM: membrane protein of unknown function; hypothetical protein complement(2639706..2640059) Geobacter uraniireducens Rf4 5164478 YP_001231034.1 CDS Gura_2281 NC_009483.1 2640403 2643078 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 2640403..2643078 Geobacter uraniireducens Rf4 5164479 YP_001231035.1 CDS Gura_2282 NC_009483.1 2643334 2644275 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(2643334..2644275) Geobacter uraniireducens Rf4 5164332 YP_001231036.1 CDS Gura_2283 NC_009483.1 2644283 2646385 R PFAM: protein of unknown function DUF255; hypothetical protein complement(2644283..2646385) Geobacter uraniireducens Rf4 5164333 YP_001231037.1 CDS Gura_2284 NC_009483.1 2646530 2647771 D PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 2646530..2647771 Geobacter uraniireducens Rf4 5164334 YP_001231038.1 CDS Gura_2285 NC_009483.1 2647936 2648832 R TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 36K type complement(2647936..2648832) Geobacter uraniireducens Rf4 5164556 YP_001231039.1 CDS Gura_2286 NC_009483.1 2648932 2649402 D TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; phosphodiesterase 2648932..2649402 Geobacter uraniireducens Rf4 5164557 YP_001231040.1 CDS Gura_2287 NC_009483.1 2649432 2649824 R hypothetical protein complement(2649432..2649824) Geobacter uraniireducens Rf4 5164558 YP_001231041.1 CDS Gura_2288 NC_009483.1 2649875 2650258 R PFAM: response regulator receiver; response regulator receiver protein complement(2649875..2650258) Geobacter uraniireducens Rf4 5164912 YP_001231042.1 CDS Gura_2289 NC_009483.1 2650305 2651267 R PFAM: protein of unknown function DUF534; hypothetical protein complement(2650305..2651267) Geobacter uraniireducens Rf4 5164913 YP_001231043.1 CDS Gura_2290 NC_009483.1 2651293 2653431 R hypothetical protein complement(2651293..2653431) Geobacter uraniireducens Rf4 5164914 YP_001231044.1 CDS Gura_2291 NC_009483.1 2653470 2654477 R TIGRFAM: cytochrome C family protein; cytochrome C family protein complement(2653470..2654477) Geobacter uraniireducens Rf4 5165076 YP_001231045.1 CDS Gura_2292 NC_009483.1 2654478 2655317 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2654478..2655317) Geobacter uraniireducens Rf4 5165077 YP_001231046.1 CDS Gura_2293 NC_009483.1 2655428 2655865 R hypothetical protein complement(2655428..2655865) Geobacter uraniireducens Rf4 5165078 YP_001231047.1 CDS Gura_2295 NC_009483.1 2657084 2658016 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(2657084..2658016) Geobacter uraniireducens Rf4 5164330 YP_001231048.1 CDS Gura_2296 NC_009483.1 2658037 2658885 R hypothetical protein complement(2658037..2658885) Geobacter uraniireducens Rf4 5164331 YP_001231049.1 CDS Gura_2297 NC_009483.1 2658863 2660020 R PFAM: histone deacetylase superfamily; histone deacetylase superfamily protein complement(2658863..2660020) Geobacter uraniireducens Rf4 5163445 YP_001231050.1 CDS Gura_2298 NC_009483.1 2660307 2661527 D PFAM: Rh family protein/ammonium transporter; Rh family protein/ammonium transporter 2660307..2661527 Geobacter uraniireducens Rf4 5163446 YP_001231051.1 CDS Gura_2299 NC_009483.1 2661660 2662487 D PFAM: response regulator receiver; General secretory system II, protein E domain protein; response regulator receiver protein 2661660..2662487 Geobacter uraniireducens Rf4 5163447 YP_001231052.1 CDS gltX NC_009483.1 2662537 2663940 R Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase complement(2662537..2663940) Geobacter uraniireducens Rf4 5165291 YP_001231053.1 CDS Gura_2301 NC_009483.1 2664027 2664251 R PFAM: protein of unknown function DUF329; hypothetical protein complement(2664027..2664251) Geobacter uraniireducens Rf4 5165292 YP_001231054.1 CDS Gura_2302 NC_009483.1 2664290 2665264 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase complement(2664290..2665264) Geobacter uraniireducens Rf4 5165293 YP_001231055.1 CDS Gura_2303 NC_009483.1 2665281 2666021 R PFAM: Sporulation domain protein; sporulation domain-containing protein complement(2665281..2666021) Geobacter uraniireducens Rf4 5165344 YP_001231056.1 CDS argS NC_009483.1 2666038 2667723 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(2666038..2667723) Geobacter uraniireducens Rf4 5165345 YP_001231057.1 CDS Gura_2305 NC_009483.1 2667723 2667905 R hypothetical protein complement(2667723..2667905) Geobacter uraniireducens Rf4 5165346 YP_001231058.1 CDS Gura_2306 NC_009483.1 2668066 2668356 R PFAM: Septum formation initiator; septum formation initiator complement(2668066..2668356) Geobacter uraniireducens Rf4 5165312 YP_001231059.1 CDS Gura_2307 NC_009483.1 2668376 2669311 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase complement(2668376..2669311) Geobacter uraniireducens Rf4 5165313 YP_001231060.1 CDS Gura_2308 NC_009483.1 2669360 2670712 R PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose 6-dehydrogenase complement(2669360..2670712) Geobacter uraniireducens Rf4 5165314 YP_001231061.1 CDS ksgA NC_009483.1 2671044 2671871 R catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase complement(2671044..2671871) Geobacter uraniireducens Rf4 5165506 YP_001231062.1 CDS Gura_2310 NC_009483.1 2671871 2672902 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease complement(2671871..2672902) Geobacter uraniireducens Rf4 5165507 YP_001231063.1 CDS Gura_2311 NC_009483.1 2672985 2674346 R PFAM: PhoH family protein; SMART: Nucleotide binding protein, PINc; PhoH family protein complement(2672985..2674346) Geobacter uraniireducens Rf4 5165508 YP_001231064.1 CDS Gura_2312 NC_009483.1 2674324 2674605 R hypothetical protein complement(2674324..2674605) Geobacter uraniireducens Rf4 5164559 YP_001231065.1 CDS Gura_2313 NC_009483.1 2674608 2675750 R TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase, class V; cysteine desulfurase complement(2674608..2675750) Geobacter uraniireducens Rf4 5164560 YP_001231066.1 CDS Gura_2314 NC_009483.1 2675775 2676842 R PFAM: phosphoesterase, RecJ domain protein; phosphoesterase domain-containing protein complement(2675775..2676842) Geobacter uraniireducens Rf4 5164561 YP_001231067.1 CDS Gura_2315 NC_009483.1 2677011 2677166 R hypothetical protein complement(2677011..2677166) Geobacter uraniireducens Rf4 5165591 YP_001231068.1 CDS Gura_2316 NC_009483.1 2677307 2677876 R hypothetical protein complement(2677307..2677876) Geobacter uraniireducens Rf4 5165592 YP_001231069.1 CDS Gura_2317 NC_009483.1 2677873 2679459 R TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; putative alpha-isopropylmalate/homocitrate synthase family transferase complement(2677873..2679459) Geobacter uraniireducens Rf4 5165593 YP_001231070.1 CDS Gura_2318 NC_009483.1 2679606 2680829 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase complement(2679606..2680829) Geobacter uraniireducens Rf4 5165443 YP_001231071.1 CDS Gura_2319 NC_009483.1 2680922 2681410 R PFAM: protein of unknown function UPF0079; hypothetical protein complement(2680922..2681410) Geobacter uraniireducens Rf4 5165444 YP_001231072.1 CDS Gura_2320 NC_009483.1 2681407 2681859 R PFAM: CBS domain containing protein; hypothetical protein complement(2681407..2681859) Geobacter uraniireducens Rf4 5165445 YP_001231073.1 CDS Gura_2321 NC_009483.1 2681910 2683475 R TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family N-terminal domain protein; carbohydrate kinase complement(2681910..2683475) Geobacter uraniireducens Rf4 5165958 YP_001231074.1 CDS acpS NC_009483.1 2683476 2683865 R Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase complement(2683476..2683865) Geobacter uraniireducens Rf4 5165959 YP_001231075.1 CDS Gura_2323 NC_009483.1 2684196 2684897 R PFAM: cyclic nucleotide-binding; regulatory protein, Crp; CRP/FNR family transcriptional regulator complement(2684196..2684897) Geobacter uraniireducens Rf4 5165960 YP_001231076.1 CDS Gura_2324 NC_009483.1 2685135 2686535 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator complement(2685135..2686535) Geobacter uraniireducens Rf4 5165685 YP_001231077.1 CDS Gura_2325 NC_009483.1 2686557 2688602 R TIGRFAM: histidine kinase; PFAM: ATP-binding region, ATPase domain protein; integral membrane sensor signal transduction histidine kinase complement(2686557..2688602) Geobacter uraniireducens Rf4 5165686 YP_001231078.1 CDS Gura_2326 NC_009483.1 2688711 2689952 R PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein complement(2688711..2689952) Geobacter uraniireducens Rf4 5165687 YP_001231079.1 CDS Gura_2327 NC_009483.1 2690399 2691847 R PFAM: Fibronectin, type III domain protein; fibronectin I domain-containing protein complement(2690399..2691847) Geobacter uraniireducens Rf4 5166721 YP_001231080.1 CDS Gura_2328 NC_009483.1 2692360 2694387 R PFAM: Fibronectin, type III domain protein; fibronectin I domain-containing protein complement(2692360..2694387) Geobacter uraniireducens Rf4 5166722 YP_001231081.1 CDS Gura_2329 NC_009483.1 2694872 2696044 D PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 2694872..2696044 Geobacter uraniireducens Rf4 5166723 YP_001231082.1 CDS Gura_2330 NC_009483.1 2696067 2697197 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 2696067..2697197 Geobacter uraniireducens Rf4 5166275 YP_001231083.1 CDS Gura_2331 NC_009483.1 2697624 2698574 D hypothetical protein 2697624..2698574 Geobacter uraniireducens Rf4 5166276 YP_001231084.1 CDS Gura_2332 NC_009483.1 2698634 2699458 D hypothetical protein 2698634..2699458 Geobacter uraniireducens Rf4 5166277 YP_001231085.1 CDS Gura_2333 NC_009483.1 2699762 2700745 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(2699762..2700745) Geobacter uraniireducens Rf4 5165748 YP_001231086.1 CDS Gura_2334 NC_009483.1 2700742 2701872 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(2700742..2701872) Geobacter uraniireducens Rf4 5165749 YP_001231087.1 CDS Gura_2335 NC_009483.1 2701914 2703128 R PFAM: protein of unknown function DUF201; hypothetical protein complement(2701914..2703128) Geobacter uraniireducens Rf4 5165750 YP_001231088.1 CDS Gura_2336 NC_009483.1 2703140 2704159 R PFAM: polysaccharide deacetylase; polysaccharide deacetylase complement(2703140..2704159) Geobacter uraniireducens Rf4 5166425 YP_001231089.1 CDS Gura_2337 NC_009483.1 2704222 2704698 R PFAM: low molecular weight phosphotyrosine protein phosphatase; protein tyrosine phosphatase complement(2704222..2704698) Geobacter uraniireducens Rf4 5166426 YP_001231090.1 CDS Gura_2338 NC_009483.1 2704826 2706103 R PFAM: O-antigen polymerase; O-antigen polymerase complement(2704826..2706103) Geobacter uraniireducens Rf4 5166427 YP_001231091.1 CDS Gura_2339 NC_009483.1 2706130 2707251 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(2706130..2707251) Geobacter uraniireducens Rf4 5166413 YP_001231092.1 CDS Gura_2340 NC_009483.1 2707256 2708188 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(2707256..2708188) Geobacter uraniireducens Rf4 5166414 YP_001231093.1 CDS Gura_2341 NC_009483.1 2708343 2708996 R hypothetical protein complement(2708343..2708996) Geobacter uraniireducens Rf4 5166415 YP_001231094.1 CDS Gura_2342 NC_009483.1 2708983 2709816 R TIGRFAM: eight transmembrane protein EpsH; transmembrane protein EpsH complement(2708983..2709816) Geobacter uraniireducens Rf4 5166313 YP_001231095.1 CDS Gura_2343 NC_009483.1 2709839 2711026 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase complement(2709839..2711026) Geobacter uraniireducens Rf4 5166314 YP_001231096.1 CDS Gura_2344 NC_009483.1 2711049 2712083 R hypothetical protein complement(2711049..2712083) Geobacter uraniireducens Rf4 5166315 YP_001231097.1 CDS Gura_2345 NC_009483.1 2712097 2713068 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(2712097..2713068) Geobacter uraniireducens Rf4 5166119 YP_001231098.1 CDS Gura_2346 NC_009483.1 2713130 2714236 R lipopolysaccharide biosynthesis protein-like protein complement(2713130..2714236) Geobacter uraniireducens Rf4 5166120 YP_001231099.1 CDS Gura_2347 NC_009483.1 2714262 2715149 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(2714262..2715149) Geobacter uraniireducens Rf4 5166121 YP_001231100.1 CDS Gura_2348 NC_009483.1 2715168 2716118 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(2715168..2716118) Geobacter uraniireducens Rf4 5166010 YP_001231101.1 CDS Gura_2349 NC_009483.1 2716147 2719071 R hypothetical protein complement(2716147..2719071) Geobacter uraniireducens Rf4 5166011 YP_001231102.1 CDS Gura_2350 NC_009483.1 2719364 2720635 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; DegT/DnrJ/EryC1/StrS aminotransferase complement(2719364..2720635) Geobacter uraniireducens Rf4 5166012 YP_001231103.1 CDS Gura_2351 NC_009483.1 2720733 2722358 R TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; amino acid adenylation domain-containing protein complement(2720733..2722358) Geobacter uraniireducens Rf4 5164763 YP_001231104.1 CDS Gura_2352 NC_009483.1 2722379 2723524 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein complement(2722379..2723524) Geobacter uraniireducens Rf4 5164764 YP_001231105.1 CDS Gura_2353 NC_009483.1 2723717 2724742 R PFAM: Arginase/agmatinase/formiminoglutamase; arginase/agmatinase/formiminoglutamase complement(2723717..2724742) Geobacter uraniireducens Rf4 5164765 YP_001231106.1 CDS Gura_2354 NC_009483.1 2724787 2725044 R hypothetical protein complement(2724787..2725044) Geobacter uraniireducens Rf4 5163666 YP_001231107.1 CDS Gura_2355 NC_009483.1 2725079 2725969 R PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2725079..2725969) Geobacter uraniireducens Rf4 5163667 YP_001231108.1 CDS Gura_2356 NC_009483.1 2726013 2726741 R UDP-glucose 4-epimerase complement(2726013..2726741) Geobacter uraniireducens Rf4 5163668 YP_001231109.1 CDS Gura_2357 NC_009483.1 2726771 2727664 R hypothetical protein complement(2726771..2727664) Geobacter uraniireducens Rf4 5163496 YP_001231110.1 CDS Gura_2358 NC_009483.1 2727734 2728999 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2727734..2728999) Geobacter uraniireducens Rf4 5163497 YP_001231111.1 CDS Gura_2359 NC_009483.1 2729183 2730031 R PFAM: ABC-2 type transporter; ABC-2 type transporter complement(2729183..2730031) Geobacter uraniireducens Rf4 5163498 YP_001231112.1 CDS Gura_2360 NC_009483.1 2730171 2731052 R PFAM: polysaccharide deacetylase; polysaccharide deacetylase complement(2730171..2731052) Geobacter uraniireducens Rf4 5162667 YP_001231113.1 CDS Gura_2361 NC_009483.1 2731100 2732356 R hypothetical protein complement(2731100..2732356) Geobacter uraniireducens Rf4 5162668 YP_001231114.1 CDS Gura_2362 NC_009483.1 2732430 2733602 R SMART: AAA ATPase; ATPase AAA complement(2732430..2733602) Geobacter uraniireducens Rf4 5162669 YP_001231115.1 CDS Gura_2363 NC_009483.1 2733710 2734537 R non-specific protein-tyrosine kinase complement(2733710..2734537) Geobacter uraniireducens Rf4 5166486 YP_001231116.1 CDS Gura_2364 NC_009483.1 2734589 2736112 R PFAM: lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein complement(2734589..2736112) Geobacter uraniireducens Rf4 5166487 YP_001231117.1 CDS Gura_2365 NC_009483.1 2736154 2737002 R PFAM: polysaccharide export protein; polysaccharide export protein complement(2736154..2737002) Geobacter uraniireducens Rf4 5166488 YP_001231118.1 CDS Gura_2366 NC_009483.1 2737017 2738378 R PFAM: sugar transferase; sugar transferase complement(2737017..2738378) Geobacter uraniireducens Rf4 5166872 YP_001231119.1 CDS Gura_2367 NC_009483.1 2738529 2741111 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(2738529..2741111) Geobacter uraniireducens Rf4 5166873 YP_001231120.1 CDS Gura_2368 NC_009483.1 2741745 2742458 D PFAM: Abortive infection protein; abortive infection protein 2741745..2742458 Geobacter uraniireducens Rf4 5166874 YP_001231121.1 CDS Gura_2369 NC_009483.1 2742536 2742820 R flagellar protein FhlB-like protein complement(2742536..2742820) Geobacter uraniireducens Rf4 5162649 YP_001231122.1 CDS Gura_2370 NC_009483.1 2742804 2743877 R hypothetical protein complement(2742804..2743877) Geobacter uraniireducens Rf4 5162650 YP_001231123.1 CDS Gura_2371 NC_009483.1 2743915 2747022 R PFAM: acriflavin resistance protein; acriflavin resistance protein complement(2743915..2747022) Geobacter uraniireducens Rf4 5162651 YP_001231124.1 CDS Gura_2372 NC_009483.1 2747084 2748271 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(2747084..2748271) Geobacter uraniireducens Rf4 5162822 YP_001231125.1 CDS Gura_2373 NC_009483.1 2748490 2750799 D TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 2748490..2750799 Geobacter uraniireducens Rf4 5162823 YP_001231126.1 CDS Gura_2374 NC_009483.1 2750811 2751857 D TIGRFAM: metal dependent phophohydrolase; PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; response regulator receiver modulated metal dependent phosphohydrolase 2750811..2751857 Geobacter uraniireducens Rf4 5162824 YP_001231127.1 CDS Gura_2375 NC_009483.1 2752028 2753479 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator complement(2752028..2753479) Geobacter uraniireducens Rf4 5162876 YP_001231128.1 CDS Gura_2376 NC_009483.1 2753629 2755032 R PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase complement(2753629..2755032) Geobacter uraniireducens Rf4 5162877 YP_001231129.1 CDS Gura_2377 NC_009483.1 2755562 2755837 R hypothetical protein complement(2755562..2755837) Geobacter uraniireducens Rf4 5162878 YP_001231130.1 CDS Gura_2378 NC_009483.1 2755887 2756828 R catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase complement(2755887..2756828) Geobacter uraniireducens Rf4 5166605 YP_001231131.1 CDS Gura_2379 NC_009483.1 2757054 2757473 D PFAM: Rieske [2Fe-2S] domain protein; Rieske (2Fe-2S) domain-containing protein 2757054..2757473 Geobacter uraniireducens Rf4 5166606 YP_001231132.1 CDS Gura_2380 NC_009483.1 2757487 2758590 D PFAM: Cytochrome b/b6, N-terminal domain; Cytochrome b/b6, C-terminal domain; cytochrome b/b6 domain-containing protein 2757487..2758590 Geobacter uraniireducens Rf4 5166607 YP_001231133.1 CDS Gura_2381 NC_009483.1 2758587 2759399 D hypothetical protein 2758587..2759399 Geobacter uraniireducens Rf4 5163250 YP_001231134.1 CDS Gura_2382 NC_009483.1 2759472 2760665 R catalyzes the interconversion of 3-phosphoglycerate and 2-phosphoglycerate; this enzyme does not require the cofactor 2,3-bisphosphoglycerate as a phosphate donor; BPG-independent PGAM; aPGAM; cofactor-independent phosphoglycerate mutase complement(2759472..2760665) Geobacter uraniireducens Rf4 5163251 YP_001231135.1 CDS Gura_2383 NC_009483.1 2760739 2761626 R TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; tyrosine recombinase XerD complement(2760739..2761626) Geobacter uraniireducens Rf4 5163252 YP_001231136.1 CDS Gura_2384 NC_009483.1 2761623 2764319 R TIGRFAM: protein-P-II uridylyltransferase; PFAM: amino acid-binding ACT domain protein; DNA polymerase, beta domain protein region; metal-dependent phosphohydrolase, HD sub domain; GlnD PII-uridylyltransferase; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(2761623..2764319) Geobacter uraniireducens Rf4 5163826 YP_001231137.1 CDS Gura_2385 NC_009483.1 2764407 2765783 R PFAM: cell wall hydrolase/autolysin; N-acetylmuramoyl-L-alanine amidase complement(2764407..2765783) Geobacter uraniireducens Rf4 5163827 YP_001231138.1 CDS Gura_2386 NC_009483.1 2765789 2768407 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(2765789..2768407) Geobacter uraniireducens Rf4 5163828 YP_001231139.1 CDS Gura_2387 NC_009483.1 2768539 2770071 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator complement(2768539..2770071) Geobacter uraniireducens Rf4 5163280 YP_001231140.1 CDS Gura_2388 NC_009483.1 2770272 2771930 R PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; GAF sensor signal transduction histidine kinase complement(2770272..2771930) Geobacter uraniireducens Rf4 5163281 YP_001231141.1 CDS Gura_2389 NC_009483.1 2772125 2773273 R PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(2772125..2773273) Geobacter uraniireducens Rf4 5163282 YP_001231142.1 CDS Gura_2390 NC_009483.1 2773300 2774418 R hypothetical protein complement(2773300..2774418) Geobacter uraniireducens Rf4 5163823 YP_001231143.1 CDS Gura_2391 NC_009483.1 2775118 2777013 D PFAM: Fibronectin, type III domain protein; fibronectin I domain-containing protein 2775118..2777013 Geobacter uraniireducens Rf4 5163824 YP_001231144.1 CDS Gura_2392 NC_009483.1 2777010 2777678 D hypothetical protein 2777010..2777678 Geobacter uraniireducens Rf4 5163825 YP_001231145.1 CDS Gura_2393 NC_009483.1 2777822 2778079 D hypothetical protein 2777822..2778079 Geobacter uraniireducens Rf4 5163982 YP_001231146.1 CDS Gura_2394 NC_009483.1 2778235 2779410 D PFAM: putative transposase; putative transposase 2778235..2779410 Geobacter uraniireducens Rf4 5163983 YP_001231147.1 CDS Gura_2395 NC_009483.1 2779733 2780278 D hypothetical protein 2779733..2780278 Geobacter uraniireducens Rf4 5163984 YP_001231148.1 CDS Gura_2396 NC_009483.1 2780244 2781485 R PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein complement(2780244..2781485) Geobacter uraniireducens Rf4 5164086 YP_001231149.1 CDS Gura_2397 NC_009483.1 2782194 2782445 D TIGRFAM: prevent-host-death family protein; prevent-host-death family protein 2782194..2782445 Geobacter uraniireducens Rf4 5164087 YP_001231150.1 CDS Gura_2398 NC_009483.1 2782429 2782827 D PFAM: PilT protein domain protein; PilT domain-containing protein 2782429..2782827 Geobacter uraniireducens Rf4 5164088 YP_001231151.1 CDS Gura_2399 NC_009483.1 2783055 2784122 D TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; adenosine deaminase 2783055..2784122 Geobacter uraniireducens Rf4 5164365 YP_001231152.1 CDS Gura_2400 NC_009483.1 2784194 2784436 D hypothetical protein 2784194..2784436 Geobacter uraniireducens Rf4 5164366 YP_001231153.1 CDS Gura_2401 NC_009483.1 2785175 2785357 R hypothetical protein complement(2785175..2785357) Geobacter uraniireducens Rf4 5164367 YP_001231154.1 CDS Gura_2402 NC_009483.1 2785856 2786011 D hypothetical protein 2785856..2786011 Geobacter uraniireducens Rf4 5164629 YP_001231155.1 CDS Gura_2403 NC_009483.1 2786173 2786364 D hypothetical protein 2786173..2786364 Geobacter uraniireducens Rf4 5164630 YP_001231156.1 CDS Gura_2404 NC_009483.1 2786697 2787872 D PFAM: transposase, IS4 family protein; transposase, IS4 family protein 2786697..2787872 Geobacter uraniireducens Rf4 5164631 YP_001231157.1 CDS Gura_2405 NC_009483.1 2787903 2788082 D PFAM: CsbD family protein; CsbD family protein 2787903..2788082 Geobacter uraniireducens Rf4 5164659 YP_001231158.1 CDS Gura_2406 NC_009483.1 2788146 2788649 D hypothetical protein 2788146..2788649 Geobacter uraniireducens Rf4 5164660 YP_001231159.1 CDS Gura_2407 NC_009483.1 2789156 2789470 R PFAM: transport-associated protein; SMART: transport-associated protein and nodulation region, bacteria; transport-associated protein complement(2789156..2789470) Geobacter uraniireducens Rf4 5164661 YP_001231160.1 CDS Gura_2408 NC_009483.1 2789684 2790301 R PFAM: OmpW family protein; OmpW family protein complement(2789684..2790301) Geobacter uraniireducens Rf4 5164541 YP_001231161.1 CDS Gura_2409 NC_009483.1 2790789 2791616 R PFAM: molybdopterin binding domain; molybdopterin binding domain-containing protein complement(2790789..2791616) Geobacter uraniireducens Rf4 5164542 YP_001231162.1 CDS Gura_2410 NC_009483.1 2791810 2792088 R hypothetical protein complement(2791810..2792088) Geobacter uraniireducens Rf4 5164543 YP_001231163.1 CDS Gura_2411 NC_009483.1 2792108 2793523 R function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; putative oxidoreductase complement(2792108..2793523) Geobacter uraniireducens Rf4 5164865 YP_001231164.1 CDS Gura_2412 NC_009483.1 2793516 2794370 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin-NADP(+) reductase subunit alpha complement(2793516..2794370) Geobacter uraniireducens Rf4 5164866 YP_001231165.1 CDS Gura_2413 NC_009483.1 2794529 2795866 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(2794529..2795866) Geobacter uraniireducens Rf4 5164867 YP_001231166.1 CDS Gura_2414 NC_009483.1 2795969 2797927 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein complement(2795969..2797927) Geobacter uraniireducens Rf4 5162694 YP_001231167.1 CDS Gura_2415 NC_009483.1 2798096 2799421 R PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; electron transfer flavoprotein subunit alpha complement(2798096..2799421) Geobacter uraniireducens Rf4 5162695 YP_001231168.1 CDS Gura_2416 NC_009483.1 2799501 2800313 R PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta complement(2799501..2800313) Geobacter uraniireducens Rf4 5162696 YP_001231169.1 CDS Gura_2417 NC_009483.1 2800358 2800552 R hypothetical protein complement(2800358..2800552) Geobacter uraniireducens Rf4 5165032 YP_001231170.1 CDS Gura_2418 NC_009483.1 2800602 2801033 R PFAM: MOSC domain containing protein; MOSC domain-containing protein complement(2800602..2801033) Geobacter uraniireducens Rf4 5165033 YP_001231171.1 CDS Gura_2419 NC_009483.1 2801127 2802107 R TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A complement(2801127..2802107) Geobacter uraniireducens Rf4 5165034 YP_001231172.1 CDS Gura_2420 NC_009483.1 2802805 2803968 D PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2802805..2803968 Geobacter uraniireducens Rf4 5164945 YP_001231173.1 CDS Gura_2421 NC_009483.1 2804249 2805979 D PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase-like; aldehyde ferredoxin oxidoreductase 2804249..2805979 Geobacter uraniireducens Rf4 5164946 YP_001231174.1 CDS Gura_2422 NC_009483.1 2806047 2806271 D PFAM: thiamineS protein; sulfur transfer protein ThiS 2806047..2806271 Geobacter uraniireducens Rf4 5164947 YP_001231175.1 CDS Gura_2423 NC_009483.1 2806273 2807121 D PFAM: UBA/THIF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 2806273..2807121 Geobacter uraniireducens Rf4 5165389 YP_001231176.1 CDS Gura_2424 NC_009483.1 2807475 2808737 D hypothetical protein 2807475..2808737 Geobacter uraniireducens Rf4 5165390 YP_001231177.1 CDS Gura_2425 NC_009483.1 2808846 2810150 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(2808846..2810150) Geobacter uraniireducens Rf4 5165391 YP_001231178.1 CDS Gura_2426 NC_009483.1 2810407 2812365 R PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; TonB-dependent receptor, plug complement(2810407..2812365) Geobacter uraniireducens Rf4 5164690 YP_001231179.1 CDS Gura_2427 NC_009483.1 2812397 2813293 D PFAM: protein of unknown function DUF534; hypothetical protein 2812397..2813293 Geobacter uraniireducens Rf4 5164691 YP_001231180.1 CDS Gura_2428 NC_009483.1 2813299 2815269 D PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor hybrid histidine kinase 2813299..2815269 Geobacter uraniireducens Rf4 5164692 YP_001231181.1 CDS Gura_2429 NC_009483.1 2815505 2815771 R hypothetical protein complement(2815505..2815771) Geobacter uraniireducens Rf4 5165397 YP_001231182.1 CDS Gura_2430 NC_009483.1 2815969 2817972 R TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; 1A family penicillin-binding protein complement(2815969..2817972) Geobacter uraniireducens Rf4 5165398 YP_001231183.1 CDS Gura_2431 NC_009483.1 2818161 2818409 R TIGRFAM: putative regulatory protein, FmdB family; FmdB family regulatory protein complement(2818161..2818409) Geobacter uraniireducens Rf4 5165399 YP_001231184.1 CDS Gura_2432 NC_009483.1 2818472 2819371 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(2818472..2819371) Geobacter uraniireducens Rf4 5165256 YP_001231185.1 CDS Gura_2433 NC_009483.1 2819731 2820219 R hypothetical protein complement(2819731..2820219) Geobacter uraniireducens Rf4 5165257 YP_001231186.1 CDS Gura_2434 NC_009483.1 2820216 2820617 R hypothetical protein complement(2820216..2820617) Geobacter uraniireducens Rf4 5165258 YP_001231187.1 CDS Gura_2435 NC_009483.1 2820698 2821609 R PFAM: nitroreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; nitroreductase complement(2820698..2821609) Geobacter uraniireducens Rf4 5164957 YP_001231188.1 CDS Gura_2436 NC_009483.1 2822059 2822718 D hypothetical protein 2822059..2822718 Geobacter uraniireducens Rf4 5164958 YP_001231189.1 CDS Gura_2437 NC_009483.1 2822715 2823410 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2822715..2823410 Geobacter uraniireducens Rf4 5164959 YP_001231190.1 CDS Gura_2438 NC_009483.1 2823407 2824627 D PFAM: protein of unknown function DUF214; hypothetical protein 2823407..2824627 Geobacter uraniireducens Rf4 5165001 YP_001231191.1 CDS Gura_2439 NC_009483.1 2824620 2825354 D hypothetical protein 2824620..2825354 Geobacter uraniireducens Rf4 5165002 YP_001231192.1 CDS Gura_2440 NC_009483.1 2825429 2825818 D hypothetical protein 2825429..2825818 Geobacter uraniireducens Rf4 5165003 YP_001231193.1 CDS Gura_2441 NC_009483.1 2825819 2826580 D hypothetical protein 2825819..2826580 Geobacter uraniireducens Rf4 5165887 YP_001231194.1 CDS Gura_2442 NC_009483.1 2826674 2827777 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase internal region; signal transduction histidine kinase LytS 2826674..2827777 Geobacter uraniireducens Rf4 5165888 YP_001231195.1 CDS Gura_2443 NC_009483.1 2827770 2828609 D PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator 2827770..2828609 Geobacter uraniireducens Rf4 5165889 YP_001231196.1 CDS Gura_2444 NC_009483.1 2829243 2830085 R PFAM: putative RNA methylase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(2829243..2830085) Geobacter uraniireducens Rf4 5165955 YP_001231197.1 CDS Gura_2445 NC_009483.1 2830165 2830518 R PFAM: regulatory protein, ArsR; regulatory protein ArsR complement(2830165..2830518) Geobacter uraniireducens Rf4 5165956 YP_001231198.1 CDS Gura_2446 NC_009483.1 2830587 2831441 R PEP phosphonomutase-like protein complement(2830587..2831441) Geobacter uraniireducens Rf4 5165957 YP_001231199.1 CDS Gura_2447 NC_009483.1 2831700 2832449 R hypothetical protein complement(2831700..2832449) Geobacter uraniireducens Rf4 5165336 YP_001231200.1 CDS Gura_2448 NC_009483.1 2832451 2833662 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(2832451..2833662) Geobacter uraniireducens Rf4 5165337 YP_001231201.1 CDS Gura_2449 NC_009483.1 2833679 2833948 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; alkylhydroperoxidase complement(2833679..2833948) Geobacter uraniireducens Rf4 5165338 YP_001231202.1 CDS Gura_2450 NC_009483.1 2834172 2835581 D PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; GntR family transcriptional regulator 2834172..2835581 Geobacter uraniireducens Rf4 5165816 YP_001231203.1 CDS Gura_2451 NC_009483.1 2835704 2836927 R PFAM: SufBD protein; SufBD protein complement(2835704..2836927) Geobacter uraniireducens Rf4 5165817 YP_001231204.1 CDS Gura_2452 NC_009483.1 2836915 2837655 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2836915..2837655) Geobacter uraniireducens Rf4 5165818 YP_001231205.1 CDS Gura_2453 NC_009483.1 2837765 2838412 R secreted protein-like protein complement(2837765..2838412) Geobacter uraniireducens Rf4 5165565 YP_001231206.1 CDS Gura_2454 NC_009483.1 2838750 2839589 D PFAM: MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase 2838750..2839589 Geobacter uraniireducens Rf4 5165566 YP_001231207.1 CDS Gura_2455 NC_009483.1 2839632 2840009 R PFAM: PilT protein domain protein; PilT domain-containing protein complement(2839632..2840009) Geobacter uraniireducens Rf4 5165567 YP_001231208.1 CDS Gura_2456 NC_009483.1 2840006 2840245 R TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein complement(2840006..2840245) Geobacter uraniireducens Rf4 5166718 YP_001231209.1 CDS Gura_2457 NC_009483.1 2840478 2840915 R hypothetical protein complement(2840478..2840915) Geobacter uraniireducens Rf4 5166719 YP_001231210.1 CDS Gura_2458 NC_009483.1 2841126 2841359 R hypothetical protein complement(2841126..2841359) Geobacter uraniireducens Rf4 5166720 YP_001231211.1 CDS Gura_2459 NC_009483.1 2841641 2842906 R PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein complement(2841641..2842906) Geobacter uraniireducens Rf4 5166528 YP_001231212.1 CDS Gura_2460 NC_009483.1 2843479 2843643 D hypothetical protein 2843479..2843643 Geobacter uraniireducens Rf4 5166529 YP_001231213.1 CDS Gura_2461 NC_009483.1 2843693 2844868 R PFAM: transposase, IS4 family protein; transposase, IS4 family protein complement(2843693..2844868) Geobacter uraniireducens Rf4 5166530 YP_001231214.1 CDS Gura_2462 NC_009483.1 2845295 2846530 R PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein complement(2845295..2846530) Geobacter uraniireducens Rf4 5166266 YP_001231215.1 CDS Gura_2463 NC_009483.1 2847118 2847960 R hypothetical protein complement(2847118..2847960) Geobacter uraniireducens Rf4 5166267 YP_001231216.1 CDS Gura_2464 NC_009483.1 2848592 2849762 D hypothetical protein join(2848592..2848948,2848947..2849762) Geobacter uraniireducens Rf4 5166268 YP_001231217.1 CDS Gura_2465 NC_009483.1 2850022 2851848 D hypothetical protein 2850022..2851848 Geobacter uraniireducens Rf4 5163049 YP_001231218.1 CDS Gura_2466 NC_009483.1 2851978 2852163 R PFAM: 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(2851978..2852163) Geobacter uraniireducens Rf4 5163050 YP_001231219.1 CDS Gura_2467 NC_009483.1 2852242 2852934 R hypothetical protein complement(2852242..2852934) Geobacter uraniireducens Rf4 5163051 YP_001231220.1 CDS Gura_2468 NC_009483.1 2852934 2853347 R hypothetical protein complement(2852934..2853347) Geobacter uraniireducens Rf4 5163067 YP_001231221.1 CDS Gura_2469 NC_009483.1 2853699 2854061 R PFAM: HEPN domain protein; HEPN domain-containing protein complement(2853699..2854061) Geobacter uraniireducens Rf4 5163068 YP_001231222.1 CDS Gura_2470 NC_009483.1 2854069 2854386 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(2854069..2854386) Geobacter uraniireducens Rf4 5163069 YP_001231223.1 CDS Gura_2472 NC_009483.1 2855211 2856344 R PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; class V aminotransferase complement(2855211..2856344) Geobacter uraniireducens Rf4 5163515 YP_001231224.1 CDS Gura_2473 NC_009483.1 2856477 2857553 D hypothetical protein 2856477..2857553 Geobacter uraniireducens Rf4 5163516 YP_001231225.1 CDS Gura_2474 NC_009483.1 2857578 2859233 D hypothetical protein 2857578..2859233 Geobacter uraniireducens Rf4 5163868 YP_001231226.1 CDS Gura_2475 NC_009483.1 2859230 2861206 D hypothetical protein 2859230..2861206 Geobacter uraniireducens Rf4 5163869 YP_001231227.1 CDS Gura_2476 NC_009483.1 2861203 2861601 D hypothetical protein 2861203..2861601 Geobacter uraniireducens Rf4 5163870 YP_001231228.1 CDS Gura_2477 NC_009483.1 2862085 2863255 R hypothetical protein complement(join(2862085..2862900,2862899..2863255)) Geobacter uraniireducens Rf4 5162918 YP_001231229.1 CDS Gura_2478 NC_009483.1 2863433 2865133 R hypothetical protein complement(2863433..2865133) Geobacter uraniireducens Rf4 5162919 YP_001231230.1 CDS Gura_2479 NC_009483.1 2865152 2865877 R hypothetical protein complement(2865152..2865877) Geobacter uraniireducens Rf4 5162920 YP_001231231.1 CDS Gura_2480 NC_009483.1 2865874 2867973 R PFAM: SMC domain protein; SMC domain-containing protein complement(2865874..2867973) Geobacter uraniireducens Rf4 5164181 YP_001231232.1 CDS Gura_2481 NC_009483.1 2868165 2870285 R PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; type III restriction enzyme, res subunit complement(2868165..2870285) Geobacter uraniireducens Rf4 5164182 YP_001231233.1 CDS Gura_2482 NC_009483.1 2870880 2871296 R PFAM: NUDIX hydrolase; NUDIX hydrolase complement(2870880..2871296) Geobacter uraniireducens Rf4 5164183 YP_001231234.1 CDS Gura_2483 NC_009483.1 2872062 2874089 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(2872062..2874089) Geobacter uraniireducens Rf4 5164846 YP_001231235.1 CDS Gura_2484 NC_009483.1 2874102 2874911 R PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(2874102..2874911) Geobacter uraniireducens Rf4 5165133 YP_001231236.1 CDS Gura_2485 NC_009483.1 2875037 2875630 R TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(2875037..2875630) Geobacter uraniireducens Rf4 5165134 YP_001231237.1 CDS Gura_2486 NC_009483.1 2875646 2876242 R PFAM: Lytic transglycosylase, catalytic; lytic transglycosylase complement(2875646..2876242) Geobacter uraniireducens Rf4 5165135 YP_001231238.1 CDS Gura_2487 NC_009483.1 2876440 2878035 D TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; L-aspartate oxidase 2876440..2878035 Geobacter uraniireducens Rf4 5162757 YP_001231239.1 CDS Gura_2488 NC_009483.1 2878072 2878347 D PFAM: Chorismate mutase; chorismate mutase 2878072..2878347 Geobacter uraniireducens Rf4 5162758 YP_001231240.1 CDS Gura_2489 NC_009483.1 2878370 2878579 D hypothetical protein 2878370..2878579 Geobacter uraniireducens Rf4 5162759 YP_001231241.1 CDS Gura_2490 NC_009483.1 2878897 2879643 R PFAM: glutamate synthase, alpha subunit domain protein; glutamate synthase subunit alpha complement(2878897..2879643) Geobacter uraniireducens Rf4 5165864 YP_001231242.1 CDS Gura_2491 NC_009483.1 2879737 2880852 R PFAM: glutamine amidotransferase, class-II; glutamine amidotransferase, class-II complement(2879737..2880852) Geobacter uraniireducens Rf4 5165865 YP_001231243.1 CDS Gura_2492 NC_009483.1 2880955 2882232 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2880955..2882232) Geobacter uraniireducens Rf4 5165866 YP_001231244.1 CDS Gura_2493 NC_009483.1 2882229 2882678 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(2882229..2882678) Geobacter uraniireducens Rf4 5164744 YP_001231245.1 CDS Gura_2494 NC_009483.1 2882772 2884301 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase complement(2882772..2884301) Geobacter uraniireducens Rf4 5164745 YP_001231246.1 CDS Gura_2495 NC_009483.1 2884680 2884994 D PFAM: protein of unknown function UPF0044; hypothetical protein 2884680..2884994 Geobacter uraniireducens Rf4 5164746 YP_001231247.1 CDS Gura_2496 NC_009483.1 2885066 2885632 R hypothetical protein complement(2885066..2885632) Geobacter uraniireducens Rf4 5164977 YP_001231248.1 CDS Gura_2497 NC_009483.1 2885940 2886140 D hypothetical protein 2885940..2886140 Geobacter uraniireducens Rf4 5164978 YP_001231249.1 CDS Gura_2498 NC_009483.1 2886252 2887403 R dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(2886252..2887403) Geobacter uraniireducens Rf4 5164979 YP_001231250.1 CDS Gura_2499 NC_009483.1 2887558 2888181 D TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; putative methyltransferase 2887558..2888181 Geobacter uraniireducens Rf4 5166103 YP_001231251.1 CDS coaD NC_009483.1 2888184 2888672 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 2888184..2888672 Geobacter uraniireducens Rf4 5166104 YP_001231252.1 CDS Gura_2501 NC_009483.1 2888714 2889907 D PFAM: aminotransferase, class I and II; class I and II aminotransferase 2888714..2889907 Geobacter uraniireducens Rf4 5166105 YP_001231253.1 CDS Gura_2502 NC_009483.1 2890001 2890195 D hypothetical protein 2890001..2890195 Geobacter uraniireducens Rf4 5163274 YP_001231254.1 CDS Gura_2503 NC_009483.1 2890321 2892120 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 2890321..2892120 Geobacter uraniireducens Rf4 5163275 YP_001231255.1 CDS Gura_2504 NC_009483.1 2892173 2892832 D TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; signal peptidase I 2892173..2892832 Geobacter uraniireducens Rf4 5163276 YP_001231256.1 CDS Gura_2505 NC_009483.1 2892917 2893636 R PFAM: RNA-binding S4 domain protein; pseudouridine synthase; pseudouridine synthase complement(2892917..2893636) Geobacter uraniireducens Rf4 5165485 YP_001231257.1 CDS Gura_2506 NC_009483.1 2893730 2894686 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(2893730..2894686) Geobacter uraniireducens Rf4 5165486 YP_001231258.1 CDS Gura_2507 NC_009483.1 2894741 2898214 R TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha complement(2894741..2898214) Geobacter uraniireducens Rf4 5165487 YP_001231259.1 CDS Gura_2508 NC_009483.1 2898432 2899043 D stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA 2898432..2899043 Geobacter uraniireducens Rf4 5163481 YP_001231260.1 CDS Gura_2509 NC_009483.1 2899141 2900097 R hypothetical protein complement(2899141..2900097) Geobacter uraniireducens Rf4 5163482 YP_001231261.1 CDS Gura_2510 NC_009483.1 2900348 2901736 D TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; Radical SAM domain protein; TatD family hydrolase 2900348..2901736 Geobacter uraniireducens Rf4 5163483 YP_001231262.1 CDS Gura_2511 NC_009483.1 2901815 2901985 R hypothetical protein complement(2901815..2901985) Geobacter uraniireducens Rf4 5164032 YP_001231263.1 CDS Gura_2512 NC_009483.1 2902045 2902371 R hypothetical protein complement(2902045..2902371) Geobacter uraniireducens Rf4 5164033 YP_001231264.1 CDS Gura_2513 NC_009483.1 2902592 2902972 D TIGRFAM: desulfoferrodoxin; PFAM: Desulfoferrodoxin, ferrous iron-binding region; Desulfoferrodoxin Dfx domain protein; desulfoferrodoxin 2902592..2902972 Geobacter uraniireducens Rf4 5164034 YP_001231265.1 CDS Gura_2514 NC_009483.1 2903008 2903862 D PFAM: cytochrome c assembly protein; cytochrome c assembly protein 2903008..2903862 Geobacter uraniireducens Rf4 5164797 YP_001231266.1 CDS Gura_2515 NC_009483.1 2904021 2904500 R hypothetical protein complement(2904021..2904500) Geobacter uraniireducens Rf4 5164798 YP_001231267.1 CDS Gura_2516 NC_009483.1 2904691 2905755 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(2904691..2905755) Geobacter uraniireducens Rf4 5164799 YP_001231268.1 CDS Gura_2517 NC_009483.1 2905931 2906245 R hypothetical protein complement(2905931..2906245) Geobacter uraniireducens Rf4 5164995 YP_001231269.1 CDS Gura_2518 NC_009483.1 2906242 2906592 R PFAM: Carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase complement(2906242..2906592) Geobacter uraniireducens Rf4 5164996 YP_001231270.1 CDS Gura_2519 NC_009483.1 2906632 2907780 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF362; hypothetical protein complement(2906632..2907780) Geobacter uraniireducens Rf4 5164997 YP_001231271.1 CDS Gura_2520 NC_009483.1 2907801 2909210 R TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; UbiD family decarboxylase complement(2907801..2909210) Geobacter uraniireducens Rf4 5165855 YP_001231272.1 CDS Gura_2521 NC_009483.1 2909219 2909911 R PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(2909219..2909911) Geobacter uraniireducens Rf4 5165856 YP_001231273.1 CDS Gura_2522 NC_009483.1 2909908 2910753 R PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(2909908..2910753) Geobacter uraniireducens Rf4 5165857 YP_001231274.1 CDS Gura_2523 NC_009483.1 2910750 2912168 R PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(2910750..2912168) Geobacter uraniireducens Rf4 5164936 YP_001231275.1 CDS Gura_2524 NC_009483.1 2912122 2912985 R PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(2912122..2912985) Geobacter uraniireducens Rf4 5164937 YP_001231276.1 CDS Gura_2525 NC_009483.1 2912985 2913233 R hypothetical protein complement(2912985..2913233) Geobacter uraniireducens Rf4 5164938 YP_001231277.1 CDS Gura_2526 NC_009483.1 2913230 2914336 R PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase complement(2913230..2914336) Geobacter uraniireducens Rf4 5166814 YP_001231278.1 CDS Gura_2527 NC_009483.1 2914464 2915675 R PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase complement(2914464..2915675) Geobacter uraniireducens Rf4 5166815 YP_001231279.1 CDS Gura_2528 NC_009483.1 2915662 2916390 R hypothetical protein complement(2915662..2916390) Geobacter uraniireducens Rf4 5166816 YP_001231280.1 CDS Gura_2529 NC_009483.1 2916466 2917770 R catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta complement(2916466..2917770) Geobacter uraniireducens Rf4 5165661 YP_001231281.1 CDS Gura_2530 NC_009483.1 2917763 2918971 R PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase, GAPDH domain protein; inositol-3-phosphate synthase complement(2917763..2918971) Geobacter uraniireducens Rf4 5165662 YP_001231282.1 CDS Gura_2531 NC_009483.1 2919000 2920025 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase complement(2919000..2920025) Geobacter uraniireducens Rf4 5165663 YP_001231283.1 CDS Gura_2532 NC_009483.1 2920019 2921326 R catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta complement(2920019..2921326) Geobacter uraniireducens Rf4 5163460 YP_001231284.1 CDS Gura_2533 NC_009483.1 2921351 2922208 R PFAM: protein of unknown function DUF169; hypothetical protein complement(2921351..2922208) Geobacter uraniireducens Rf4 5163461 YP_001231285.1 CDS Gura_2534 NC_009483.1 2922228 2922686 R PFAM: regulatory protein, MarR; MarR family transcriptional regulator complement(2922228..2922686) Geobacter uraniireducens Rf4 5163462 YP_001231286.1 CDS Gura_2535 NC_009483.1 2922920 2924090 D hypothetical protein join(2922920..2923276,2923275..2924090) Geobacter uraniireducens Rf4 5166693 YP_001231287.1 CDS Gura_2536 NC_009483.1 2924475 2925719 D PFAM: major facilitator superfamily MFS_1; major facilitator transporter 2924475..2925719 Geobacter uraniireducens Rf4 5166694 YP_001231288.1 CDS Gura_2537 NC_009483.1 2926195 2927208 R PFAM: transglutaminase domain protein; transglutaminase domain-containing protein complement(2926195..2927208) Geobacter uraniireducens Rf4 5166695 YP_001231289.1 CDS Gura_2538 NC_009483.1 2927234 2927992 R PFAM: Rhodanese domain protein; rhodanese domain-containing protein complement(2927234..2927992) Geobacter uraniireducens Rf4 5166022 YP_001231290.1 CDS Gura_2539 NC_009483.1 2928112 2929014 D PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator 2928112..2929014 Geobacter uraniireducens Rf4 5166023 YP_001231291.1 CDS Gura_2540 NC_009483.1 2929301 2929627 R PFAM: Class I peptide chain release factor; class I peptide chain release factor complement(2929301..2929627) Geobacter uraniireducens Rf4 5166024 YP_001231292.1 CDS Gura_2541 NC_009483.1 2929724 2930266 D TIGRFAM: metal dependent phophohydrolase; metal dependent phophohydrolase 2929724..2930266 Geobacter uraniireducens Rf4 5166419 YP_001231293.1 CDS Gura_2542 NC_009483.1 2930502 2932415 D TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; protein phosphatase 2C domain protein; putative PAS/PAC sensor protein 2930502..2932415 Geobacter uraniireducens Rf4 5166420 YP_001231294.1 CDS Gura_2543 NC_009483.1 2932599 2933690 D phosphotransacetylase domain-containing protein 2932599..2933690 Geobacter uraniireducens Rf4 5166421 YP_001231295.1 CDS Gura_2544 NC_009483.1 2933702 2936344 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; P-type HAD superfamily ATPase complement(2933702..2936344) Geobacter uraniireducens Rf4 5167081 YP_001231296.1 CDS Gura_2545 NC_009483.1 2936460 2937686 D hypothetical protein 2936460..2937686 Geobacter uraniireducens Rf4 5167082 YP_001231297.1 CDS Gura_2546 NC_009483.1 2937710 2938417 R protein-disulfide isomerase-like protein complement(2937710..2938417) Geobacter uraniireducens Rf4 5167083 YP_001231298.1 CDS Gura_2547 NC_009483.1 2938875 2941097 D PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2938875..2941097 Geobacter uraniireducens Rf4 5166890 YP_001231299.1 CDS Gura_2548 NC_009483.1 2941135 2941581 D hypothetical protein 2941135..2941581 Geobacter uraniireducens Rf4 5166891 YP_001231300.1 CDS Gura_2549 NC_009483.1 2941600 2942250 D PFAM: Radical SAM domain protein; radical SAM domain-containing protein 2941600..2942250 Geobacter uraniireducens Rf4 5166892 YP_001231301.1 CDS Gura_2550 NC_009483.1 2942901 2953697 D TIGRFAM: putative outer membrane adhesin like protein; PFAM: Hemolysin-type calcium-binding region; Ig family protein; Haemolysin-type calcium binding domain protein; SMART: Dystroglycan-type cadherin domain protein; putative outer membrane adhesin like protein 2942901..2953697 Geobacter uraniireducens Rf4 5164029 YP_001231302.1 CDS Gura_2551 NC_009483.1 2953821 2955050 D UDP-glucuronosyltransferase-like protein 2953821..2955050 Geobacter uraniireducens Rf4 5164030 YP_001231303.1 CDS Gura_2552 NC_009483.1 2955047 2956465 D TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; HlyD family type I secretion membrane fusion protein 2955047..2956465 Geobacter uraniireducens Rf4 5164031 YP_001231304.1 CDS Gura_2553 NC_009483.1 2957218 2958282 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(2957218..2958282) Geobacter uraniireducens Rf4 5162640 YP_001231305.1 CDS Gura_2554 NC_009483.1 2958551 2958871 R hypothetical protein complement(2958551..2958871) Geobacter uraniireducens Rf4 5163426 YP_001231306.1 CDS Gura_2555 NC_009483.1 2958938 2960152 R PFAM: transposase, mutator type; transposase, mutator type complement(2958938..2960152) Geobacter uraniireducens Rf4 5163427 YP_001231307.1 CDS Gura_2556 NC_009483.1 2960683 2961360 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 2960683..2961360 Geobacter uraniireducens Rf4 5163428 YP_001231308.1 CDS Gura_2557 NC_009483.1 2961387 2961671 D hypothetical protein 2961387..2961671 Geobacter uraniireducens Rf4 5162855 YP_001231309.1 CDS Gura_2558 NC_009483.1 2961724 2962752 D TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein, family 1; phosphate ABC transporter periplasmic phosphate-binding protein 2961724..2962752 Geobacter uraniireducens Rf4 5162856 YP_001231310.1 CDS Gura_2559 NC_009483.1 2962862 2963836 D TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 2962862..2963836 Geobacter uraniireducens Rf4 5162857 YP_001231311.1 CDS Gura_2560 NC_009483.1 2963833 2964675 D TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter inner membrane protein PstA 2963833..2964675 Geobacter uraniireducens Rf4 5163451 YP_001231312.1 CDS Gura_2561 NC_009483.1 2965162 2965920 D ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 2965162..2965920 Geobacter uraniireducens Rf4 5163452 YP_001231313.1 CDS Gura_2562 NC_009483.1 2966088 2966759 D TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; phosphate uptake regulator PhoU 2966088..2966759 Geobacter uraniireducens Rf4 5163453 YP_001231314.1 CDS Gura_2563 NC_009483.1 2967059 2968234 R PFAM: transposase, IS4 family protein; transposase, IS4 family protein complement(2967059..2968234) Geobacter uraniireducens Rf4 5163271 YP_001231315.1 CDS Gura_2564 NC_009483.1 2968498 2969001 D PFAM: Phosphoglycerate mutase; putative phosphohistidine phosphatase SixA 2968498..2969001 Geobacter uraniireducens Rf4 5163272 YP_001231316.1 CDS Gura_2565 NC_009483.1 2969035 2969559 D hypothetical protein 2969035..2969559 Geobacter uraniireducens Rf4 5163273 YP_001231317.1 CDS Gura_2566 NC_009483.1 2969560 2970246 D PFAM: thymidylate kinase; dTMP kinase 2969560..2970246 Geobacter uraniireducens Rf4 5162828 YP_001231318.1 CDS Gura_2567 NC_009483.1 2970296 2970979 D PFAM: thymidylate kinase; thymidylate kinase 2970296..2970979 Geobacter uraniireducens Rf4 5162829 YP_001231319.1 CDS Gura_2568 NC_009483.1 2970976 2971326 D hypothetical protein 2970976..2971326 Geobacter uraniireducens Rf4 5162830 YP_001231320.1 CDS Gura_2569 NC_009483.1 2971339 2972232 D PFAM: CHAD domain containing protein; CHAD domain-containing protein 2971339..2972232 Geobacter uraniireducens Rf4 5163084 YP_001231321.1 CDS Gura_2570 NC_009483.1 2972229 2973770 D PFAM: Ppx/GppA phosphatase; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; Ppx/GppA phosphatase 2972229..2973770 Geobacter uraniireducens Rf4 5163085 YP_001231322.1 CDS Gura_2571 NC_009483.1 2973843 2974613 R hypothetical protein complement(2973843..2974613) Geobacter uraniireducens Rf4 5163086 YP_001231323.1 CDS Gura_2572 NC_009483.1 2975776 2976858 D hypothetical protein 2975776..2976858 Geobacter uraniireducens Rf4 5162967 YP_001231324.1 CDS Gura_2573 NC_009483.1 2976858 2978477 D PFAM: GH3 auxin-responsive promoter; GH3 auxin-responsive promoter 2976858..2978477 Geobacter uraniireducens Rf4 5162968 YP_001231325.1 CDS Gura_2574 NC_009483.1 2978523 2979056 D hypothetical protein 2978523..2979056 Geobacter uraniireducens Rf4 5162969 YP_001231326.1 CDS Gura_2575 NC_009483.1 2979339 2979893 D hypothetical protein 2979339..2979893 Geobacter uraniireducens Rf4 5163517 YP_001231327.1 CDS Gura_2576 NC_009483.1 2980023 2980184 D hypothetical protein 2980023..2980184 Geobacter uraniireducens Rf4 5163518 YP_001231328.1 CDS Gura_2577 NC_009483.1 2980544 2981335 D hypothetical protein 2980544..2981335 Geobacter uraniireducens Rf4 5163519 YP_001231329.1 CDS Gura_2578 NC_009483.1 2981436 2982776 D hypothetical protein 2981436..2982776 Geobacter uraniireducens Rf4 5163614 YP_001231330.1 CDS Gura_2579 NC_009483.1 2983537 2984529 R non-specific protein-tyrosine kinase complement(2983537..2984529) Geobacter uraniireducens Rf4 5163615 YP_001231331.1 CDS Gura_2580 NC_009483.1 2984560 2986122 R PFAM: lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein complement(2984560..2986122) Geobacter uraniireducens Rf4 5163616 YP_001231332.1 CDS Gura_2581 NC_009483.1 2986158 2987423 R hypothetical protein complement(2986158..2987423) Geobacter uraniireducens Rf4 5163639 YP_001231333.1 CDS Gura_2582 NC_009483.1 2987446 2988063 R PFAM: polysaccharide export protein; polysaccharide export protein complement(2987446..2988063) Geobacter uraniireducens Rf4 5163640 YP_001231334.1 CDS Gura_2583 NC_009483.1 2988334 2990523 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein complement(2988334..2990523) Geobacter uraniireducens Rf4 5163641 YP_001231335.1 CDS Gura_2584 NC_009483.1 2990631 2992259 R PFAM: glycosyl transferase, family 4; glycosyl transferase family protein complement(2990631..2992259) Geobacter uraniireducens Rf4 5163718 YP_001231336.1 CDS Gura_2585 NC_009483.1 2992256 2993818 R TIGRFAM: eight transmembrane protein EpsH; transmembrane protein EpsH complement(2992256..2993818) Geobacter uraniireducens Rf4 5163719 YP_001231337.1 CDS Gura_2586 NC_009483.1 2993818 2994774 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(2993818..2994774) Geobacter uraniireducens Rf4 5163720 YP_001231338.1 CDS Gura_2587 NC_009483.1 2994800 2995963 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(2994800..2995963) Geobacter uraniireducens Rf4 5162676 YP_001231339.1 CDS Gura_2588 NC_009483.1 2996324 2997604 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(2996324..2997604) Geobacter uraniireducens Rf4 5162677 YP_001231340.1 CDS Gura_2590 NC_009483.1 2997757 3000627 R PFAM: glycoside hydrolase, family 20; glycoside hydrolase family protein complement(2997757..3000627) Geobacter uraniireducens Rf4 5164121 YP_001231341.1 CDS Gura_2591 NC_009483.1 3000629 3001750 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(3000629..3001750) Geobacter uraniireducens Rf4 5164122 YP_001231342.1 CDS Gura_2592 NC_009483.1 3001747 3002406 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(3001747..3002406) Geobacter uraniireducens Rf4 5164123 YP_001231343.1 CDS Gura_2593 NC_009483.1 3002403 3003404 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(3002403..3003404) Geobacter uraniireducens Rf4 5164035 YP_001231344.1 CDS Gura_2594 NC_009483.1 3003391 3004677 R hypothetical protein complement(3003391..3004677) Geobacter uraniireducens Rf4 5164036 YP_001231345.1 CDS Gura_2595 NC_009483.1 3004696 3006054 R PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(3004696..3006054) Geobacter uraniireducens Rf4 5164037 YP_001231346.1 CDS Gura_2596 NC_009483.1 3006104 3006775 R hypothetical protein complement(3006104..3006775) Geobacter uraniireducens Rf4 5163703 YP_001231347.1 CDS Gura_2597 NC_009483.1 3006792 3007415 R hypothetical protein complement(3006792..3007415) Geobacter uraniireducens Rf4 5163704 YP_001231348.1 CDS Gura_2598 NC_009483.1 3007714 3008790 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase complement(3007714..3008790) Geobacter uraniireducens Rf4 5163705 YP_001231349.1 CDS Gura_2599 NC_009483.1 3009091 3011271 D TIGRFAM: conserved repeat domain; PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; protein of unknown function DUF11; peptidase domain protein; hypothetical protein 3009091..3011271 Geobacter uraniireducens Rf4 5163979 YP_001231350.1 CDS Gura_2600 NC_009483.1 3011393 3011776 D hypothetical protein 3011393..3011776 Geobacter uraniireducens Rf4 5163980 YP_001231351.1 CDS Gura_2601 NC_009483.1 3011786 3013975 D hypothetical protein 3011786..3013975 Geobacter uraniireducens Rf4 5163981 YP_001231352.1 CDS Gura_2602 NC_009483.1 3014251 3016689 D PFAM: glycosyl transferase, group 1; PHP C-terminal domain protein; group 1 glycosyl transferase 3014251..3016689 Geobacter uraniireducens Rf4 5163188 YP_001231353.1 CDS Gura_2603 NC_009483.1 3016711 3016890 D hypothetical protein 3016711..3016890 Geobacter uraniireducens Rf4 5163189 YP_001231354.1 CDS Gura_2604 NC_009483.1 3016929 3017927 R hypothetical protein complement(3016929..3017927) Geobacter uraniireducens Rf4 5163190 YP_001231355.1 CDS Gura_2605 NC_009483.1 3017952 3018932 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(3017952..3018932) Geobacter uraniireducens Rf4 5164208 YP_001231356.1 CDS Gura_2606 NC_009483.1 3019131 3020849 R hypothetical protein complement(3019131..3020849) Geobacter uraniireducens Rf4 5164209 YP_001231357.1 CDS Gura_2607 NC_009483.1 3021020 3021754 R hypothetical protein complement(3021020..3021754) Geobacter uraniireducens Rf4 5164210 YP_001231358.1 CDS Gura_2608 NC_009483.1 3021890 3022297 R PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(3021890..3022297) Geobacter uraniireducens Rf4 5164265 YP_001231359.1 CDS Gura_2609 NC_009483.1 3022294 3024090 R PFAM: MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(3022294..3024090) Geobacter uraniireducens Rf4 5164266 YP_001231360.1 CDS Gura_2610 NC_009483.1 3024115 3034137 R TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; filamentous hemagglutinin outer membrane protein complement(3024115..3034137) Geobacter uraniireducens Rf4 5164267 YP_001231361.1 CDS Gura_2611 NC_009483.1 3034202 3035833 R PFAM: Polypeptide-transport-associated protein domain protein, ShlB-type; polypeptide-transport-associated domain-containing protein complement(3034202..3035833) Geobacter uraniireducens Rf4 5163700 YP_001231362.1 CDS Gura_2612 NC_009483.1 3035969 3037210 D PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 3035969..3037210 Geobacter uraniireducens Rf4 5163701 YP_001231363.1 CDS Gura_2613 NC_009483.1 3037257 3038522 R PFAM: peptidylprolyl isomerase, FKBP-type; Thioredoxin domain; FKBP-type peptidylprolyl isomerase complement(3037257..3038522) Geobacter uraniireducens Rf4 5163702 YP_001231364.1 CDS Gura_2614 NC_009483.1 3038519 3039337 R hypothetical protein complement(3038519..3039337) Geobacter uraniireducens Rf4 5164338 YP_001231365.1 CDS Gura_2615 NC_009483.1 3039770 3041434 D hypothetical protein 3039770..3041434 Geobacter uraniireducens Rf4 5164339 YP_001231366.1 CDS Gura_2616 NC_009483.1 3042370 3042885 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(3042370..3042885) Geobacter uraniireducens Rf4 5164340 YP_001231367.1 CDS Gura_2617 NC_009483.1 3042895 3043905 R PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; RpoD family RNA polymerase sigma factor complement(3042895..3043905) Geobacter uraniireducens Rf4 5163904 YP_001231368.1 CDS Gura_2618 NC_009483.1 3043987 3044640 R TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase complement(3043987..3044640) Geobacter uraniireducens Rf4 5163905 YP_001231369.1 CDS surE NC_009483.1 3044697 3045443 R catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE complement(3044697..3045443) Geobacter uraniireducens Rf4 5163906 YP_001231370.1 CDS Gura_2620 NC_009483.1 3045742 3046461 D PFAM: regulatory protein, LuxR; response regulator receiver protein 3045742..3046461 Geobacter uraniireducens Rf4 5163090 YP_001231371.1 CDS Gura_2621 NC_009483.1 3046868 3047221 R PFAM: regulatory protein, MerR; MerR family transcriptional regulator complement(3046868..3047221) Geobacter uraniireducens Rf4 5163092 YP_001231372.1 CDS Gura_2622 NC_009483.1 3047242 3047520 R PFAM: histone family protein DNA-binding protein; histone family protein DNA-binding protein complement(3047242..3047520) Geobacter uraniireducens Rf4 5164402 YP_001231373.1 CDS pheT NC_009483.1 3047613 3050018 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(3047613..3050018) Geobacter uraniireducens Rf4 5164403 YP_001231374.1 CDS pheS NC_009483.1 3050097 3051113 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(3050097..3051113) Geobacter uraniireducens Rf4 5164443 YP_001231375.1 CDS rplT NC_009483.1 3051189 3051542 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(3051189..3051542) Geobacter uraniireducens Rf4 5164444 YP_001231376.1 CDS rpmI NC_009483.1 3051709 3051906 R PFAM: ribosomal protein L35; 50S ribosomal protein L35 complement(3051709..3051906) Geobacter uraniireducens Rf4 5164445 YP_001231377.1 CDS Gura_2627 NC_009483.1 3051933 3052349 R TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; translation initiation factor IF-3 complement(3051933..3052349) Geobacter uraniireducens Rf4 5164600 YP_001231378.1 CDS thrS NC_009483.1 3052467 3054404 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(3052467..3054404) Geobacter uraniireducens Rf4 5164601 YP_001231379.1 CDS Gura_2629 NC_009483.1 3054841 3055647 R hypothetical protein complement(3054841..3055647) Geobacter uraniireducens Rf4 5164602 YP_001231380.1 CDS Gura_2630 NC_009483.1 3055682 3056755 R hypothetical protein complement(3055682..3056755) Geobacter uraniireducens Rf4 5163790 YP_001231381.1 CDS Gura_2631 NC_009483.1 3057191 3057598 R hypothetical protein complement(3057191..3057598) Geobacter uraniireducens Rf4 5163791 YP_001231382.1 CDS Gura_2632 NC_009483.1 3057595 3060360 R hypothetical protein complement(3057595..3060360) Geobacter uraniireducens Rf4 5163792 YP_001231383.1 CDS Gura_2633 NC_009483.1 3060471 3061568 R PFAM: protein of unknown function UPF0118; hypothetical protein complement(3060471..3061568) Geobacter uraniireducens Rf4 5164456 YP_001231384.1 CDS Gura_2634 NC_009483.1 3061620 3062258 R PFAM: protein of unknown function DUF330; hypothetical protein complement(3061620..3062258) Geobacter uraniireducens Rf4 5164457 YP_001231385.1 CDS Gura_2635 NC_009483.1 3062274 3063260 R PFAM: Mammalian cell entry related domain protein; hypothetical protein complement(3062274..3063260) Geobacter uraniireducens Rf4 5164458 YP_001231386.1 CDS Gura_2636 NC_009483.1 3063294 3064079 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3063294..3064079) Geobacter uraniireducens Rf4 5164419 YP_001231387.1 CDS Gura_2637 NC_009483.1 3064082 3065287 R PFAM: protein of unknown function DUF140; hypothetical protein complement(3064082..3065287) Geobacter uraniireducens Rf4 5164420 YP_001231388.1 CDS Gura_2639 NC_009483.1 3065984 3066304 R exopolyphosphatase-like protein complement(3065984..3066304) Geobacter uraniireducens Rf4 5164735 YP_001231389.1 CDS Gura_2640 NC_009483.1 3066301 3067194 R PFAM: CHAD domain containing protein; CHAD domain-containing protein complement(3066301..3067194) Geobacter uraniireducens Rf4 5164736 YP_001231390.1 CDS Gura_2641 NC_009483.1 3067191 3067544 R hypothetical protein complement(3067191..3067544) Geobacter uraniireducens Rf4 5164737 YP_001231391.1 CDS Gura_2642 NC_009483.1 3067546 3068226 R PFAM: thymidylate kinase; thymidylate kinase complement(3067546..3068226) Geobacter uraniireducens Rf4 5164699 YP_001231392.1 CDS Gura_2643 NC_009483.1 3068279 3068962 R PFAM: thymidylate kinase; dTMP kinase complement(3068279..3068962) Geobacter uraniireducens Rf4 5164700 YP_001231393.1 CDS Gura_2644 NC_009483.1 3068959 3069486 R hypothetical protein complement(3068959..3069486) Geobacter uraniireducens Rf4 5164701 YP_001231394.1 CDS Gura_2645 NC_009483.1 3069526 3070029 R TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; phosphohistidine phosphatase SixA complement(3069526..3070029) Geobacter uraniireducens Rf4 5163343 YP_001231395.1 CDS Gura_2646 NC_009483.1 3070299 3070988 R hypothetical protein complement(3070299..3070988) Geobacter uraniireducens Rf4 5163344 YP_001231396.1 CDS Gura_2647 NC_009483.1 3071197 3072021 R PFAM: protein of unknown function DUF344; hypothetical protein complement(3071197..3072021) Geobacter uraniireducens Rf4 5163345 YP_001231397.1 CDS Gura_2648 NC_009483.1 3072155 3074026 R SMART: Aldehyde ferredoxin oxidoreductase-like; aldehyde ferredoxin oxidoreductase-like protein complement(3072155..3074026) Geobacter uraniireducens Rf4 5165023 YP_001231398.1 CDS Gura_2649 NC_009483.1 3074116 3074490 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(3074116..3074490) Geobacter uraniireducens Rf4 5165024 YP_001231399.1 CDS Gura_2651 NC_009483.1 3074737 3075180 R PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase, 20 kDa subunit complement(3074737..3075180) Geobacter uraniireducens Rf4 5164579 YP_001231400.1 CDS Gura_2652 NC_009483.1 3075199 3076080 R PFAM: respiratory-chain NADH dehydrogenase, subunit 1; respiratory-chain NADH dehydrogenase subunit 1 complement(3075199..3076080) Geobacter uraniireducens Rf4 5164580 YP_001231401.1 CDS Gura_2653 NC_009483.1 3076467 3078365 R PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase (quinone) complement(3076467..3078365) Geobacter uraniireducens Rf4 5164581 YP_001231402.1 CDS Gura_2654 NC_009483.1 3078509 3080167 R catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase complement(3078509..3080167) Geobacter uraniireducens Rf4 5164665 YP_001231403.1 CDS Gura_2655 NC_009483.1 3080206 3081627 R PFAM: pyruvate kinase; pyruvate kinase complement(3080206..3081627) Geobacter uraniireducens Rf4 5164666 YP_001231404.1 CDS Gura_2656 NC_009483.1 3081779 3083047 R AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase complement(3081779..3083047) Geobacter uraniireducens Rf4 5164667 YP_001231405.1 CDS Gura_2657 NC_009483.1 3083085 3084374 R catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate; diphosphate--fructose-6-phosphate 1-phosphotransferase complement(3083085..3084374) Geobacter uraniireducens Rf4 5163420 YP_001231406.1 CDS Gura_2658 NC_009483.1 3084562 3085245 R hypothetical protein complement(3084562..3085245) Geobacter uraniireducens Rf4 5163421 YP_001231407.1 CDS Gura_2659 NC_009483.1 3085276 3086343 R TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(3085276..3086343) Geobacter uraniireducens Rf4 5163422 YP_001231408.1 CDS Gura_2660 NC_009483.1 3086412 3087389 R hypothetical protein complement(3086412..3087389) Geobacter uraniireducens Rf4 5164747 YP_001231409.1 CDS Gura_2661 NC_009483.1 3087615 3090128 R TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35; glycogen/starch/alpha-glucan phosphorylase complement(3087615..3090128) Geobacter uraniireducens Rf4 5164748 YP_001231410.1 CDS Gura_2663 NC_009483.1 3090304 3091794 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein complement(3090304..3091794) Geobacter uraniireducens Rf4 5165064 YP_001231411.1 CDS Gura_2664 NC_009483.1 3091796 3095008 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein complement(3091796..3095008) Geobacter uraniireducens Rf4 5165065 YP_001231412.1 CDS Gura_2665 NC_009483.1 3095024 3096256 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(3095024..3096256) Geobacter uraniireducens Rf4 5165066 YP_001231413.1 CDS Gura_2666 NC_009483.1 3096787 3097743 R hypothetical protein complement(3096787..3097743) Geobacter uraniireducens Rf4 5165073 YP_001231414.1 CDS Gura_2667 NC_009483.1 3097801 3099063 R hypothetical protein complement(3097801..3099063) Geobacter uraniireducens Rf4 5165074 YP_001231415.1 CDS Gura_2668 NC_009483.1 3099094 3099705 R hypothetical protein complement(3099094..3099705) Geobacter uraniireducens Rf4 5165075 YP_001231416.1 CDS Gura_2669 NC_009483.1 3099854 3100555 R hypothetical protein complement(3099854..3100555) Geobacter uraniireducens Rf4 5164547 YP_001231417.1 CDS Gura_2670 NC_009483.1 3100624 3100962 R PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(3100624..3100962) Geobacter uraniireducens Rf4 5164548 YP_001231418.1 CDS Gura_2671 NC_009483.1 3101099 3103279 R PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; NifA subfamily transcriptional regulator complement(3101099..3103279) Geobacter uraniireducens Rf4 5164549 YP_001231419.1 CDS Gura_2672 NC_009483.1 3103786 3104337 R hypothetical protein complement(3103786..3104337) Geobacter uraniireducens Rf4 5165303 YP_001231420.1 CDS Gura_2673 NC_009483.1 3104793 3105665 R hypothetical protein complement(3104793..3105665) Geobacter uraniireducens Rf4 5165305 YP_001231421.1 CDS Gura_2674 NC_009483.1 3105662 3106474 R hypothetical protein complement(3105662..3106474) Geobacter uraniireducens Rf4 5164877 YP_001231422.1 CDS Gura_2675 NC_009483.1 3106477 3107220 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3106477..3107220) Geobacter uraniireducens Rf4 5164878 YP_001231423.1 CDS Gura_2676 NC_009483.1 3107272 3108447 R PFAM: transposase, IS4 family protein; transposase, IS4 family protein complement(3107272..3108447) Geobacter uraniireducens Rf4 5165497 YP_001231424.1 CDS Gura_2677 NC_009483.1 3108709 3109320 R hypothetical protein complement(3108709..3109320) Geobacter uraniireducens Rf4 5165498 YP_001231425.1 CDS Gura_2678 NC_009483.1 3109593 3110966 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator complement(3109593..3110966) Geobacter uraniireducens Rf4 5165499 YP_001231426.1 CDS Gura_2679 NC_009483.1 3111044 3112678 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(3111044..3112678) Geobacter uraniireducens Rf4 5165557 YP_001231427.1 CDS Gura_2680 NC_009483.1 3112682 3113899 R PFAM: type II secretion system protein; type II secretion system protein complement(3112682..3113899) Geobacter uraniireducens Rf4 5165558 YP_001231428.1 CDS Gura_2681 NC_009483.1 3113959 3115065 R TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein complement(3113959..3115065) Geobacter uraniireducens Rf4 5165559 YP_001231429.1 CDS Gura_2682 NC_009483.1 3115078 3116784 R TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; type IV-A pilus assembly ATPase PilB complement(3115078..3116784) Geobacter uraniireducens Rf4 5165446 YP_001231430.1 CDS Gura_2683 NC_009483.1 3116854 3117723 R TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding, N-terminal domain protein; shikimate 5-dehydrogenase complement(3116854..3117723) Geobacter uraniireducens Rf4 5165447 YP_001231431.1 CDS Gura_2684 NC_009483.1 3117720 3119585 R hypothetical protein complement(3117720..3119585) Geobacter uraniireducens Rf4 5165448 YP_001231432.1 CDS Gura_2685 NC_009483.1 3119578 3120606 R PFAM: conserved hypothetical protein 374; hypothetical protein complement(3119578..3120606) Geobacter uraniireducens Rf4 5164644 YP_001231433.1 CDS Gura_2686 NC_009483.1 3120609 3121571 R TIGRFAM: riboflavin biosynthesis protein RibF; cytidyltransferase-related domain; PFAM: Riboflavin kinase / FAD synthetase; cytidylyltransferase; riboflavin biosynthesis protein RibF complement(3120609..3121571) Geobacter uraniireducens Rf4 5164645 YP_001231434.1 CDS Gura_2687 NC_009483.1 3121607 3122443 R TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase subunit TatC complement(3121607..3122443) Geobacter uraniireducens Rf4 5164646 YP_001231435.1 CDS Gura_2688 NC_009483.1 3122633 3123685 R PFAM: CheB methylesterase; response regulator receiver; response regulator receiver modulated CheB methylesterase complement(3122633..3123685) Geobacter uraniireducens Rf4 5165946 YP_001231436.1 CDS Gura_2689 NC_009483.1 3123696 3124547 R PFAM: MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase complement(3123696..3124547) Geobacter uraniireducens Rf4 5165947 YP_001231437.1 CDS Gura_2690 NC_009483.1 3124608 3125306 R PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; HEAT repeat-containing PBS lyase complement(3124608..3125306) Geobacter uraniireducens Rf4 5165948 YP_001231438.1 CDS Gura_2691 NC_009483.1 3125299 3126195 R PFAM: MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase complement(3125299..3126195) Geobacter uraniireducens Rf4 5165940 YP_001231439.1 CDS Gura_2692 NC_009483.1 3126266 3128572 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3126266..3128572) Geobacter uraniireducens Rf4 5165941 YP_001231440.1 CDS Gura_2693 NC_009483.1 3128621 3129112 R PFAM: CheW domain protein; putative CheW protein complement(3128621..3129112) Geobacter uraniireducens Rf4 5165942 YP_001231441.1 CDS Gura_2694 NC_009483.1 3129165 3130841 R PFAM: CheW domain protein; ATP-binding region, ATPase domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; CheA signal transduction histidine kinase complement(3129165..3130841) Geobacter uraniireducens Rf4 5165760 YP_001231442.1 CDS Gura_2695 NC_009483.1 3130854 3131255 R PFAM: response regulator receiver; response regulator receiver protein complement(3130854..3131255) Geobacter uraniireducens Rf4 5165761 YP_001231443.1 CDS Gura_2696 NC_009483.1 3131297 3131689 R PFAM: response regulator receiver; response regulator receiver protein complement(3131297..3131689) Geobacter uraniireducens Rf4 5165762 YP_001231444.1 CDS Gura_2697 NC_009483.1 3132110 3133453 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator complement(3132110..3133453) Geobacter uraniireducens Rf4 5164647 YP_001231445.1 CDS Gura_2698 NC_009483.1 3133450 3134766 R PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(3133450..3134766) Geobacter uraniireducens Rf4 5164648 YP_001231446.1 CDS Gura_2699 NC_009483.1 3134933 3137224 R TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B, OB region N-terminal domain; SMART: Cold shock protein; ribonuclease R complement(3134933..3137224) Geobacter uraniireducens Rf4 5164649 YP_001231447.1 CDS Gura_2700 NC_009483.1 3137659 3139806 D PFAM: TPR repeat-containing protein; Lytic transglycosylase, catalytic; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; lytic transglycosylase 3137659..3139806 Geobacter uraniireducens Rf4 5162733 YP_001231448.1 CDS Gura_2701 NC_009483.1 3140091 3141908 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3140091..3141908 Geobacter uraniireducens Rf4 5162734 YP_001231449.1 CDS Gura_2702 NC_009483.1 3141901 3143100 D hypothetical protein 3141901..3143100 Geobacter uraniireducens Rf4 5162735 YP_001231450.1 CDS Gura_2703 NC_009483.1 3143258 3143671 D PFAM: regulatory protein, MarR; MarR family transcriptional regulator 3143258..3143671 Geobacter uraniireducens Rf4 5165667 YP_001231451.1 CDS Gura_2704 NC_009483.1 3143685 3144956 D PFAM: outer membrane efflux protein; outer membrane efflux protein 3143685..3144956 Geobacter uraniireducens Rf4 5165668 YP_001231452.1 CDS Gura_2705 NC_009483.1 3145189 3146295 D PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein 3145189..3146295 Geobacter uraniireducens Rf4 5165669 YP_001231453.1 CDS Gura_2706 NC_009483.1 3146510 3148123 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA family drug resistance transporter 3146510..3148123 Geobacter uraniireducens Rf4 5166575 YP_001231454.1 CDS Gura_2707 NC_009483.1 3148409 3150739 D TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 3148409..3150739 Geobacter uraniireducens Rf4 5166576 YP_001231455.1 CDS Gura_2708 NC_009483.1 3150721 3152127 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 3150721..3152127 Geobacter uraniireducens Rf4 5166577 YP_001231456.1 CDS Gura_2709 NC_009483.1 3152504 3152776 D hypothetical protein 3152504..3152776 Geobacter uraniireducens Rf4 5165890 YP_001231457.1 CDS Gura_2710 NC_009483.1 3152810 3153229 D response regulator receiver protein 3152810..3153229 Geobacter uraniireducens Rf4 5165891 YP_001231458.1 CDS Gura_2711 NC_009483.1 3153226 3153477 D hypothetical protein 3153226..3153477 Geobacter uraniireducens Rf4 5165892 YP_001231459.1 CDS Gura_2712 NC_009483.1 3153673 3154773 D hypothetical protein 3153673..3154773 Geobacter uraniireducens Rf4 5165914 YP_001231460.1 CDS Gura_2713 NC_009483.1 3154770 3155438 D PFAM: cytochrome B561; cytochrome B561 3154770..3155438 Geobacter uraniireducens Rf4 5165915 YP_001231461.1 CDS Gura_2714 NC_009483.1 3155477 3155992 D hypothetical protein 3155477..3155992 Geobacter uraniireducens Rf4 5165916 YP_001231462.1 CDS Gura_2715 NC_009483.1 3156197 3156439 D PFAM: CopG domain protein DNA-binding domain protein; CopG family transcriptional regulator 3156197..3156439 Geobacter uraniireducens Rf4 5166016 YP_001231463.1 CDS Gura_2716 NC_009483.1 3156424 3156759 D PFAM: PemK family protein; transcriptional modulator of MazE/toxin MazF 3156424..3156759 Geobacter uraniireducens Rf4 5166017 YP_001231464.1 CDS Gura_2717 NC_009483.1 3156865 3157116 D PFAM: CopG domain protein DNA-binding domain protein; CopG family transcriptional regulator 3156865..3157116 Geobacter uraniireducens Rf4 5166018 YP_001231465.1 CDS Gura_2718 NC_009483.1 3157094 3157378 D TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; addiction module antitoxin 3157094..3157378 Geobacter uraniireducens Rf4 5166055 YP_001231466.1 CDS Gura_2719 NC_009483.1 3157375 3157767 R hypothetical protein complement(3157375..3157767) Geobacter uraniireducens Rf4 5166056 YP_001231467.1 CDS Gura_2720 NC_009483.1 3158010 3158708 R hypothetical protein complement(3158010..3158708) Geobacter uraniireducens Rf4 5166057 YP_001231468.1 CDS Gura_2721 NC_009483.1 3159159 3159449 R TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; CRISPR-associated Cas2 family protein complement(3159159..3159449) Geobacter uraniireducens Rf4 5165822 YP_001231469.1 CDS Gura_2722 NC_009483.1 3159570 3160013 R PFAM: protein of unknown function DUF559; hypothetical protein complement(3159570..3160013) Geobacter uraniireducens Rf4 5165823 YP_001231470.1 CDS Gura_2723 NC_009483.1 3160070 3160696 R TIGRFAM: CRISPR-associated protein Cas4; CRISPR-associated Cas4 family protein complement(3160070..3160696) Geobacter uraniireducens Rf4 5166498 YP_001231471.1 CDS Gura_2724 NC_009483.1 3160875 3161030 R hypothetical protein complement(3160875..3161030) Geobacter uraniireducens Rf4 5166499 YP_001231472.1 CDS Gura_2725 NC_009483.1 3161251 3161724 R hypothetical protein complement(3161251..3161724) Geobacter uraniireducens Rf4 5166500 YP_001231473.1 CDS Gura_2726 NC_009483.1 3162267 3162533 D TIGRFAM: putative addiction module component, TIGR02574 family; addiction module proein 3162267..3162533 Geobacter uraniireducens Rf4 5166441 YP_001231474.1 CDS Gura_2727 NC_009483.1 3162530 3162847 D hypothetical protein 3162530..3162847 Geobacter uraniireducens Rf4 5166442 YP_001231475.1 CDS Gura_2728 NC_009483.1 3162953 3164116 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase 3162953..3164116 Geobacter uraniireducens Rf4 5166443 YP_001231476.1 CDS Gura_2729 NC_009483.1 3164245 3164964 R involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase complement(3164245..3164964) Geobacter uraniireducens Rf4 5166355 YP_001231477.1 CDS glmM NC_009483.1 3164957 3166321 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(3164957..3166321) Geobacter uraniireducens Rf4 5166356 YP_001231478.1 CDS Gura_2731 NC_009483.1 3166360 3166758 R hypothetical protein complement(3166360..3166758) Geobacter uraniireducens Rf4 5166357 YP_001231479.1 CDS Gura_2732 NC_009483.1 3166755 3167582 R PFAM: protein of unknown function DUF147; hypothetical protein complement(3166755..3167582) Geobacter uraniireducens Rf4 5166322 YP_001231480.1 CDS Gura_2733 NC_009483.1 3167601 3168455 R TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS; dihydropteroate synthase complement(3167601..3168455) Geobacter uraniireducens Rf4 5166323 YP_001231481.1 CDS Gura_2734 NC_009483.1 3168455 3170308 R TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH complement(3168455..3170308) Geobacter uraniireducens Rf4 5166324 YP_001231482.1 CDS Gura_2735 NC_009483.1 3170419 3171798 R TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; tRNA(Ile)-lysidine synthetase domain protein; tRNA(Ile)-lysidine synthetase complement(3170419..3171798) Geobacter uraniireducens Rf4 5166244 YP_001231483.1 CDS Gura_2736 NC_009483.1 3172019 3172528 R hypothetical protein complement(3172019..3172528) Geobacter uraniireducens Rf4 5166245 YP_001231484.1 CDS Gura_2737 NC_009483.1 3172530 3173285 R PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic complement(3172530..3173285) Geobacter uraniireducens Rf4 5166246 YP_001231485.1 CDS Gura_2738 NC_009483.1 3173464 3175149 R PFAM: AAA-4 family protein; putative transcriptional regulator complement(3173464..3175149) Geobacter uraniireducens Rf4 5166152 YP_001231486.1 CDS Gura_2739 NC_009483.1 3175528 3178173 R hypothetical protein complement(3175528..3178173) Geobacter uraniireducens Rf4 5166153 YP_001231487.1 CDS Gura_2740 NC_009483.1 3178178 3180007 R PFAM: DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein complement(3178178..3180007) Geobacter uraniireducens Rf4 5166154 YP_001231488.1 CDS Gura_2741 NC_009483.1 3180152 3181831 R hypothetical protein complement(3180152..3181831) Geobacter uraniireducens Rf4 5166063 YP_001231489.1 CDS Gura_2742 NC_009483.1 3182036 3182998 R SMART: TIR protein; TIR protein complement(3182036..3182998) Geobacter uraniireducens Rf4 5166064 YP_001231490.1 CDS Gura_2743 NC_009483.1 3183932 3186721 R TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase complement(3183932..3186721) Geobacter uraniireducens Rf4 5165192 YP_001231491.1 CDS Gura_2744 NC_009483.1 3186995 3187423 D PFAM: response regulator receiver; response regulator receiver protein 3186995..3187423 Geobacter uraniireducens Rf4 5165193 YP_001231492.1 CDS Gura_2745 NC_009483.1 3187420 3188250 D hypothetical protein 3187420..3188250 Geobacter uraniireducens Rf4 5166802 YP_001231493.1 CDS Gura_2746 NC_009483.1 3188321 3188992 R hypothetical protein complement(3188321..3188992) Geobacter uraniireducens Rf4 5166803 YP_001231494.1 CDS Gura_2747 NC_009483.1 3189214 3189636 D hypothetical protein 3189214..3189636 Geobacter uraniireducens Rf4 5166804 YP_001231495.1 CDS Gura_2748 NC_009483.1 3189998 3194803 R hypothetical protein complement(3189998..3194803) Geobacter uraniireducens Rf4 5166262 YP_001231496.1 CDS Gura_2749 NC_009483.1 3194903 3195715 R hypothetical protein complement(3194903..3195715) Geobacter uraniireducens Rf4 5166263 YP_001231497.1 CDS Gura_2750 NC_009483.1 3196204 3196491 R hypothetical protein complement(3196204..3196491) Geobacter uraniireducens Rf4 5166264 YP_001231498.1 CDS Gura_2751 NC_009483.1 3196850 3198208 R PFAM: magnesium chelatase, ChlI subunit; response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator complement(3196850..3198208) Geobacter uraniireducens Rf4 5164118 YP_001231499.1 CDS Gura_2752 NC_009483.1 3198195 3199577 R PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; histidine kinase complement(3198195..3199577) Geobacter uraniireducens Rf4 5164119 YP_001231500.1 CDS Gura_2753 NC_009483.1 3199673 3200551 R TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein complement(3199673..3200551) Geobacter uraniireducens Rf4 5164120 YP_001231501.1 CDS Gura_2754 NC_009483.1 3200599 3202353 R hypothetical protein complement(3200599..3202353) Geobacter uraniireducens Rf4 5166209 YP_001231502.1 CDS Gura_2755 NC_009483.1 3202350 3203393 R PFAM: NHL repeat containing protein; SMP-30/Gluconolaconase/LRE domain protein; NHL repeat-containing protein complement(3202350..3203393) Geobacter uraniireducens Rf4 5166210 YP_001231503.1 CDS Gura_2756 NC_009483.1 3203541 3205526 R hypothetical protein complement(3203541..3205526) Geobacter uraniireducens Rf4 5166211 YP_001231504.1 CDS Gura_2757 NC_009483.1 3205539 3206144 R TIGRFAM: cytochrome C family protein; cytochrome C family protein complement(3205539..3206144) Geobacter uraniireducens Rf4 5163378 YP_001231505.1 CDS Gura_2758 NC_009483.1 3206147 3207337 R PFAM: NHL repeat containing protein; NHL repeat-containing protein complement(3206147..3207337) Geobacter uraniireducens Rf4 5163379 YP_001231506.1 CDS Gura_2759 NC_009483.1 3207558 3208907 R TIGRFAM: cytochrome C family protein; cytochrome C family protein complement(3207558..3208907) Geobacter uraniireducens Rf4 5163380 YP_001231507.1 CDS Gura_2760 NC_009483.1 3209557 3210309 R TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; cobalt ABC transporter ATPase complement(3209557..3210309) Geobacter uraniireducens Rf4 5163442 YP_001231508.1 CDS Gura_2761 NC_009483.1 3210306 3211118 R TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; cobalt ABC transporter inner membrane protein CbiQ complement(3210306..3211118) Geobacter uraniireducens Rf4 5163443 YP_001231509.1 CDS Gura_2762 NC_009483.1 3211196 3212242 R PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; cobalamin (vitamin B12) biosynthesis CbiM protein complement(3211196..3212242) Geobacter uraniireducens Rf4 5163444 YP_001231510.1 CDS Gura_2763 NC_009483.1 3213232 3214161 D phosphate/phosphonate ABC transporter periplasmic component-like protein 3213232..3214161 Geobacter uraniireducens Rf4 5166546 YP_001231511.1 CDS Gura_2764 NC_009483.1 3214168 3214713 D hypothetical protein 3214168..3214713 Geobacter uraniireducens Rf4 5166547 YP_001231512.1 CDS Gura_2765 NC_009483.1 3214716 3215780 D hypothetical protein 3214716..3215780 Geobacter uraniireducens Rf4 5166548 YP_001231513.1 CDS Gura_2766 NC_009483.1 3215820 3217109 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(3215820..3217109) Geobacter uraniireducens Rf4 5164650 YP_001231514.1 CDS Gura_2767 NC_009483.1 3217106 3218086 R SMART: Parallel beta-helix repeat; parallel beta-helix repeat-containing protein complement(3217106..3218086) Geobacter uraniireducens Rf4 5164651 YP_001231515.1 CDS Gura_2768 NC_009483.1 3218086 3218649 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein complement(3218086..3218649) Geobacter uraniireducens Rf4 5164652 YP_001231516.1 CDS Gura_2769 NC_009483.1 3218646 3219470 R PFAM: cytochrome c biogenesis protein, transmembrane region; high-affinity nickel-transporter; high-affinity nickel-transporter complement(3218646..3219470) Geobacter uraniireducens Rf4 5163034 YP_001231517.1 CDS Gura_2770 NC_009483.1 3219457 3220374 R hypothetical protein complement(3219457..3220374) Geobacter uraniireducens Rf4 5163035 YP_001231518.1 CDS Gura_2771 NC_009483.1 3220511 3221218 R hypothetical protein complement(3220511..3221218) Geobacter uraniireducens Rf4 5163036 YP_001231519.1 CDS Gura_2772 NC_009483.1 3221215 3223776 R SMART: Parallel beta-helix repeat; parallel beta-helix repeat-containing protein complement(3221215..3223776) Geobacter uraniireducens Rf4 5162891 YP_001231520.1 CDS Gura_2773 NC_009483.1 3223917 3224372 R hypothetical protein complement(3223917..3224372) Geobacter uraniireducens Rf4 5162892 YP_001231521.1 CDS Gura_2774 NC_009483.1 3224369 3224953 R hypothetical protein complement(3224369..3224953) Geobacter uraniireducens Rf4 5162893 YP_001231522.1 CDS Gura_2775 NC_009483.1 3224958 3226376 R PFAM: Polysulphide reductase, NrfD; polysulfide reductase NrfD complement(3224958..3226376) Geobacter uraniireducens Rf4 5166908 YP_001231523.1 CDS Gura_2776 NC_009483.1 3226369 3227073 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(3226369..3227073) Geobacter uraniireducens Rf4 5166909 YP_001231524.1 CDS Gura_2777 NC_009483.1 3227315 3229510 R PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; nitrate reductase complement(3227315..3229510) Geobacter uraniireducens Rf4 5166910 YP_001231525.1 CDS Gura_2778 NC_009483.1 3229705 3230220 R hypothetical protein complement(3229705..3230220) Geobacter uraniireducens Rf4 5166941 YP_001231526.1 CDS Gura_2779 NC_009483.1 3230567 3232267 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3230567..3232267) Geobacter uraniireducens Rf4 5166942 YP_001231527.1 CDS Gura_2780 NC_009483.1 3232632 3233312 R PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator complement(3232632..3233312) Geobacter uraniireducens Rf4 5166943 YP_001231528.1 CDS Gura_2781 NC_009483.1 3233369 3236062 R TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase complement(3233369..3236062) Geobacter uraniireducens Rf4 5166552 YP_001231529.1 CDS Gura_2782 NC_009483.1 3236430 3237074 R PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; two component LuxR family transcriptional regulator complement(3236430..3237074) Geobacter uraniireducens Rf4 5166553 YP_001231530.1 CDS Gura_2783 NC_009483.1 3237150 3238691 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase, dimerisation and phosphoacceptor region; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(3237150..3238691) Geobacter uraniireducens Rf4 5166554 YP_001231531.1 CDS Gura_2784 NC_009483.1 3239202 3240197 D TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; TRAP dicarboxylate transporter subunit DctP 3239202..3240197 Geobacter uraniireducens Rf4 5167084 YP_001231532.1 CDS Gura_2785 NC_009483.1 3240322 3241608 D transposase 3240322..3241608 Geobacter uraniireducens Rf4 5167085 YP_001231533.1 CDS Gura_2786 NC_009483.1 3241877 3242545 D PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 3241877..3242545 Geobacter uraniireducens Rf4 5167086 YP_001231534.1 CDS Gura_2787 NC_009483.1 3242542 3243921 D TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM 3242542..3243921 Geobacter uraniireducens Rf4 5166447 YP_001231535.1 CDS Gura_2788 NC_009483.1 3244390 3245676 D PFAM: Citrate transporter; citrate transporter 3244390..3245676 Geobacter uraniireducens Rf4 5166448 YP_001231536.1 CDS Gura_2789 NC_009483.1 3245968 3246960 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase complement(3245968..3246960) Geobacter uraniireducens Rf4 5166449 YP_001231537.1 CDS Gura_2790 NC_009483.1 3247007 3248854 R PFAM: carbon starvation protein CstA; carbon starvation protein CstA complement(3247007..3248854) Geobacter uraniireducens Rf4 5163046 YP_001231538.1 CDS Gura_2791 NC_009483.1 3249345 3250097 R PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator complement(3249345..3250097) Geobacter uraniireducens Rf4 5163047 YP_001231539.1 CDS Gura_2792 NC_009483.1 3250094 3251788 R PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type, transmembrane region; signal transduction histidine kinase LytS complement(3250094..3251788) Geobacter uraniireducens Rf4 5163048 YP_001231540.1 CDS Gura_2793 NC_009483.1 3252213 3252914 R hypothetical protein complement(3252213..3252914) Geobacter uraniireducens Rf4 5166899 YP_001231541.1 CDS Gura_2794 NC_009483.1 3252907 3254043 R PFAM: SMC domain protein; SMC domain-containing protein complement(3252907..3254043) Geobacter uraniireducens Rf4 5166900 YP_001231542.1 CDS Gura_2796 NC_009483.1 3256576 3257304 R TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; RNA methyltransferase complement(3256576..3257304) Geobacter uraniireducens Rf4 5162642 YP_001231543.1 CDS Gura_2797 NC_009483.1 3257373 3258098 R TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase complement(3257373..3258098) Geobacter uraniireducens Rf4 5166495 YP_001231544.1 CDS Gura_2798 NC_009483.1 3258223 3259980 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(3258223..3259980) Geobacter uraniireducens Rf4 5166496 YP_001231545.1 CDS ispG NC_009483.1 3259992 3261050 R catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(3259992..3261050) Geobacter uraniireducens Rf4 5166497 YP_001231546.1 CDS Gura_2800 NC_009483.1 3261338 3262687 R converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase complement(3261338..3262687) Geobacter uraniireducens Rf4 5166661 YP_001231547.1 CDS Gura_2801 NC_009483.1 3263000 3264412 D TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; RNA methyltransferase 3263000..3264412 Geobacter uraniireducens Rf4 5166662 YP_001231548.1 CDS Gura_2802 NC_009483.1 3264433 3265107 R hypothetical protein complement(3264433..3265107) Geobacter uraniireducens Rf4 5166663 YP_001231549.1 CDS Gura_2803 NC_009483.1 3265104 3266450 R TIGRFAM: metal dependent phophohydrolase; PFAM: histidine kinase, HAMP region domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(3265104..3266450) Geobacter uraniireducens Rf4 5166640 YP_001231550.1 CDS Gura_2804 NC_009483.1 3266838 3268220 D PFAM: transposase, IS4 family protein; transposase, IS4 family protein 3266838..3268220 Geobacter uraniireducens Rf4 5166641 YP_001231551.1 CDS Gura_2805 NC_009483.1 3268451 3269317 R PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; 2-hydroxy-3-oxopropionate reductase complement(3268451..3269317) Geobacter uraniireducens Rf4 5166642 YP_001231552.1 CDS Gura_2806 NC_009483.1 3269430 3270086 R PFAM: HhH-GPD family protein; DNA-(apurinic or apyrimidinic site) lyase complement(3269430..3270086) Geobacter uraniireducens Rf4 5166272 YP_001231553.1 CDS Gura_2807 NC_009483.1 3270083 3270313 R hypothetical protein complement(3270083..3270313) Geobacter uraniireducens Rf4 5166273 YP_001231554.1 CDS Gura_2808 NC_009483.1 3270533 3271399 D PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; phosphotransferase domain-containing protein 3270533..3271399 Geobacter uraniireducens Rf4 5166274 YP_001231555.1 CDS Gura_2809 NC_009483.1 3271469 3272290 R PFAM: transport-associated protein; transport-associated protein complement(3271469..3272290) Geobacter uraniireducens Rf4 5164850 YP_001231556.1 CDS Gura_2810 NC_009483.1 3272408 3273004 D S-isoprenylcysteine methyltransferase-like protein 3272408..3273004 Geobacter uraniireducens Rf4 5164851 YP_001231557.1 CDS Gura_2811 NC_009483.1 3273085 3273768 R PFAM: MgtC/SapB transporter; MgtC/SapB transporter complement(3273085..3273768) Geobacter uraniireducens Rf4 5164852 YP_001231558.1 CDS Gura_2812 NC_009483.1 3273860 3274777 R hypothetical protein complement(3273860..3274777) Geobacter uraniireducens Rf4 5164821 YP_001231559.1 CDS Gura_2813 NC_009483.1 3274793 3275704 R hypothetical protein complement(3274793..3275704) Geobacter uraniireducens Rf4 5164822 YP_001231560.1 CDS Gura_2814 NC_009483.1 3275701 3276810 R PFAM: Sporulation domain protein; sporulation domain-containing protein complement(3275701..3276810) Geobacter uraniireducens Rf4 5164823 YP_001231561.1 CDS Gura_2815 NC_009483.1 3276969 3279062 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(3276969..3279062) Geobacter uraniireducens Rf4 5167010 YP_001231562.1 CDS Gura_2816 NC_009483.1 3279137 3279907 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(3279137..3279907) Geobacter uraniireducens Rf4 5167011 YP_001231563.1 CDS Gura_2817 NC_009483.1 3280045 3281055 R TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; Helix-turn-helix, type 11 domain protein; biotin--acetyl-CoA-carboxylase ligase complement(3280045..3281055) Geobacter uraniireducens Rf4 5167012 YP_001231564.1 CDS Gura_2818 NC_009483.1 3281052 3281882 R TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase complement(3281052..3281882) Geobacter uraniireducens Rf4 5165730 YP_001231565.1 CDS Gura_2819 NC_009483.1 3282084 3283400 D PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; diguanylate cyclase 3282084..3283400 Geobacter uraniireducens Rf4 5165731 YP_001231566.1 CDS Gura_2820 NC_009483.1 3283397 3283951 D hypothetical protein 3283397..3283951 Geobacter uraniireducens Rf4 5165732 YP_001231567.1 CDS Gura_2821 NC_009483.1 3283959 3284495 R hypothetical protein complement(3283959..3284495) Geobacter uraniireducens Rf4 5165754 YP_001231568.1 CDS Gura_2822 NC_009483.1 3284652 3285674 D hypothetical protein 3284652..3285674 Geobacter uraniireducens Rf4 5165755 YP_001231569.1 CDS Gura_2823 NC_009483.1 3285828 3286910 D hypothetical protein 3285828..3286910 Geobacter uraniireducens Rf4 5165756 YP_001231570.1 CDS Gura_2824 NC_009483.1 3286967 3288424 R PFAM: Heat shock protein 70; 2-alkenal reductase complement(3286967..3288424) Geobacter uraniireducens Rf4 5164668 YP_001231571.1 CDS Gura_2825 NC_009483.1 3288412 3288639 R PFAM: gas vesicle protein GVPa; gas vesicle protein GvpA complement(3288412..3288639) Geobacter uraniireducens Rf4 5164669 YP_001231572.1 CDS Gura_2826 NC_009483.1 3288648 3289397 R PFAM: Gas vesicle synthesis GvpLGvpF; gas vesicle synthesis GvpLGvpF complement(3288648..3289397) Geobacter uraniireducens Rf4 5164670 YP_001231573.1 CDS Gura_2827 NC_009483.1 3289387 3289677 R hypothetical protein complement(3289387..3289677) Geobacter uraniireducens Rf4 5162949 YP_001231574.1 CDS Gura_2828 NC_009483.1 3289693 3290058 R PFAM: gas vesicle protein GVPa; gas vesicle protein GvpA complement(3289693..3290058) Geobacter uraniireducens Rf4 5162950 YP_001231575.1 CDS Gura_2829 NC_009483.1 3290404 3292317 R TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; arsenite-activated ATPase ArsA complement(3290404..3292317) Geobacter uraniireducens Rf4 5162951 YP_001231576.1 CDS Gura_2830 NC_009483.1 3292369 3292632 R hypothetical protein complement(3292369..3292632) Geobacter uraniireducens Rf4 5165706 YP_001231577.1 CDS Gura_2831 NC_009483.1 3292668 3292907 R PFAM: Gas vesicle G; gas vesicle protein G complement(3292668..3292907) Geobacter uraniireducens Rf4 5165707 YP_001231578.1 CDS Gura_2832 NC_009483.1 3292904 3293878 R PFAM: heat shock protein DnaJ domain protein; Gas vesicle synthesis GvpLGvpF; gas vesicle synthesis GvpLGvpF complement(3292904..3293878) Geobacter uraniireducens Rf4 5165708 YP_001231579.1 CDS Gura_2833 NC_009483.1 3293889 3294440 R PFAM: heat shock protein Hsp20; heat shock protein Hsp20 complement(3293889..3294440) Geobacter uraniireducens Rf4 5163463 YP_001231580.1 CDS Gura_2834 NC_009483.1 3294468 3295217 R PFAM: Gas vesicle synthesis GvpLGvpF; gas vesicle synthesis GvpLGvpF complement(3294468..3295217) Geobacter uraniireducens Rf4 5163464 YP_001231581.1 CDS Gura_2835 NC_009483.1 3295343 3295660 R hypothetical protein complement(3295343..3295660) Geobacter uraniireducens Rf4 5163465 YP_001231582.1 CDS Gura_2836 NC_009483.1 3295687 3296709 R TIGRFAM: gas vesicle protein GvpN; PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; gas vesicle protein GvpN complement(3295687..3296709) Geobacter uraniireducens Rf4 5165528 YP_001231583.1 CDS Gura_2837 NC_009483.1 3297095 3297430 R hypothetical protein complement(3297095..3297430) Geobacter uraniireducens Rf4 5165529 YP_001231584.1 CDS Gura_2838 NC_009483.1 3297458 3298105 R hypothetical protein complement(3297458..3298105) Geobacter uraniireducens Rf4 5165530 YP_001231585.1 CDS Gura_2839 NC_009483.1 3298254 3298472 R involved in formation of gas vesicle which are protein structures that contain gas involved in buoyancy; part of an operon of other gas vesicle synthesis proteins; gas vesicle synthesis protein GvpA complement(3298254..3298472) Geobacter uraniireducens Rf4 5165150 YP_001231586.1 CDS Gura_2840 NC_009483.1 3298727 3300187 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator complement(3298727..3300187) Geobacter uraniireducens Rf4 5165151 YP_001231587.1 CDS Gura_2841 NC_009483.1 3300174 3301229 R PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; nitrogen-specific signal transduction histidine kinase NtrB complement(3300174..3301229) Geobacter uraniireducens Rf4 5165152 YP_001231588.1 CDS Gura_2842 NC_009483.1 3301516 3303621 R TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: AAA ATPase VAT domain protein; AAA ATPase, central domain protein; cell division protein 48, CDC48, domain 2; SMART: AAA ATPase; ATPase AAA complement(3301516..3303621) Geobacter uraniireducens Rf4 5164635 YP_001231589.1 CDS Gura_2843 NC_009483.1 3303906 3304487 R hypothetical protein complement(3303906..3304487) Geobacter uraniireducens Rf4 5164636 YP_001231590.1 CDS Gura_2844 NC_009483.1 3304491 3304763 R hypothetical protein complement(3304491..3304763) Geobacter uraniireducens Rf4 5164637 YP_001231591.1 CDS Gura_2845 NC_009483.1 3305095 3306744 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3305095..3306744) Geobacter uraniireducens Rf4 5163298 YP_001231592.1 CDS Gura_2846 NC_009483.1 3306942 3307544 D PFAM: flavin reductase domain protein, FMN-binding; flavin reductase domain-containing protein 3306942..3307544 Geobacter uraniireducens Rf4 5163299 YP_001231593.1 CDS Gura_2847 NC_009483.1 3307727 3308425 R spermidine synthase-like protein complement(3307727..3308425) Geobacter uraniireducens Rf4 5163300 YP_001231594.1 CDS Gura_2848 NC_009483.1 3308490 3308975 R hypothetical protein complement(3308490..3308975) Geobacter uraniireducens Rf4 5163573 YP_001231595.1 CDS Gura_2849 NC_009483.1 3309472 3310092 R PFAM: Haloacid dehalogenase domain protein hydrolase; hydrolase complement(3309472..3310092) Geobacter uraniireducens Rf4 5163574 YP_001231596.1 CDS Gura_2850 NC_009483.1 3310177 3310494 R PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease complement(3310177..3310494) Geobacter uraniireducens Rf4 5163575 YP_001231597.1 CDS rnhA NC_009483.1 3310587 3311030 R An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H complement(3310587..3311030) Geobacter uraniireducens Rf4 5163329 YP_001231598.1 CDS Gura_2852 NC_009483.1 3311020 3311673 R PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(3311020..3311673) Geobacter uraniireducens Rf4 5163330 YP_001231599.1 CDS Gura_2853 NC_009483.1 3311789 3313525 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(3311789..3313525) Geobacter uraniireducens Rf4 5163331 YP_001231600.1 CDS Gura_2854 NC_009483.1 3313587 3314600 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(3313587..3314600) Geobacter uraniireducens Rf4 5162769 YP_001231601.1 CDS Gura_2855 NC_009483.1 3315489 3315641 D hypothetical protein 3315489..3315641 Geobacter uraniireducens Rf4 5162770 YP_001231602.1 CDS Gura_2856 NC_009483.1 3315722 3316852 R glycosyltransferase-like protein complement(3315722..3316852) Geobacter uraniireducens Rf4 5162771 YP_001231603.1 CDS Gura_2857 NC_009483.1 3316871 3317971 R TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; rod shape-determining protein RodA complement(3316871..3317971) Geobacter uraniireducens Rf4 5162792 YP_001231604.1 CDS Gura_2858 NC_009483.1 3317986 3319896 R PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; peptidoglycan glycosyltransferase complement(3317986..3319896) Geobacter uraniireducens Rf4 5162793 YP_001231605.1 CDS Gura_2859 NC_009483.1 3319893 3320381 R hypothetical protein complement(3319893..3320381) Geobacter uraniireducens Rf4 5162794 YP_001231606.1 CDS Gura_2860 NC_009483.1 3320374 3321198 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(3320374..3321198) Geobacter uraniireducens Rf4 5162748 YP_001231607.1 CDS Gura_2861 NC_009483.1 3321279 3321767 R dTDP-4-dehydrorhamnose 3 5-epimerase-like protein complement(3321279..3321767) Geobacter uraniireducens Rf4 5162749 YP_001231608.1 CDS Gura_2862 NC_009483.1 3321764 3322669 R TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase complement(3321764..3322669) Geobacter uraniireducens Rf4 5162750 YP_001231609.1 CDS Gura_2863 NC_009483.1 3322922 3323491 R TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; D,D-heptose 1,7-bisphosphate phosphatase complement(3322922..3323491) Geobacter uraniireducens Rf4 5164530 YP_001231610.1 CDS Gura_2864 NC_009483.1 3323690 3324259 R catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase complement(3323690..3324259) Geobacter uraniireducens Rf4 5164531 YP_001231611.1 CDS Gura_2865 NC_009483.1 3324256 3325293 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(3324256..3325293) Geobacter uraniireducens Rf4 5164532 YP_001231612.1 CDS Gura_2866 NC_009483.1 3325449 3326492 R TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; rod shape-determining protein MreB complement(3325449..3326492) Geobacter uraniireducens Rf4 5164347 YP_001231613.1 CDS Gura_2867 NC_009483.1 3326718 3328295 D hypothetical protein 3326718..3328295 Geobacter uraniireducens Rf4 5164348 YP_001231614.1 CDS Gura_2868 NC_009483.1 3328464 3329354 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 3328464..3329354 Geobacter uraniireducens Rf4 5164349 YP_001231615.1 CDS Gura_2869 NC_009483.1 3329455 3330813 R TIGRFAM: integron integrase; PFAM: phage integrase family protein; integron integrase complement(3329455..3330813) Geobacter uraniireducens Rf4 5164915 YP_001231616.1 CDS Gura_2870 NC_009483.1 3330987 3331373 D hypothetical protein 3330987..3331373 Geobacter uraniireducens Rf4 5164916 YP_001231617.1 CDS Gura_2871 NC_009483.1 3331529 3332704 D PFAM: putative transposase; putative transposase 3331529..3332704 Geobacter uraniireducens Rf4 5164917 YP_001231618.1 CDS Gura_2872 NC_009483.1 3333223 3334062 D PFAM: phage integrase family protein; phage integrase family protein 3333223..3334062 Geobacter uraniireducens Rf4 5164885 YP_001231619.1 CDS Gura_2873 NC_009483.1 3334065 3334634 D hypothetical protein 3334065..3334634 Geobacter uraniireducens Rf4 5164886 YP_001231620.1 CDS Gura_2874 NC_009483.1 3334679 3335416 R PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; IstB ATP binding domain-containing protein complement(3334679..3335416) Geobacter uraniireducens Rf4 5164887 YP_001231621.1 CDS Gura_2875 NC_009483.1 3335403 3336923 R PFAM: Integrase, catalytic region; integrase catalytic subunit complement(3335403..3336923) Geobacter uraniireducens Rf4 5164431 YP_001231622.1 CDS Gura_2876 NC_009483.1 3336972 3337619 D PFAM: putative transposase; putative transposase 3336972..3337619 Geobacter uraniireducens Rf4 5164432 YP_001231623.1 CDS Gura_2877 NC_009483.1 3337938 3338558 D hypothetical protein 3337938..3338558 Geobacter uraniireducens Rf4 5164433 YP_001231624.1 CDS Gura_2879 NC_009483.1 3339248 3340489 D PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 3339248..3340489 Geobacter uraniireducens Rf4 5164006 YP_001231625.1 CDS Gura_2880 NC_009483.1 3342222 3342848 D hypothetical protein 3342222..3342848 Geobacter uraniireducens Rf4 5164007 YP_001231626.1 CDS Gura_2881 NC_009483.1 3342885 3343235 D hypothetical protein 3342885..3343235 Geobacter uraniireducens Rf4 5166301 YP_001231627.1 CDS Gura_2882 NC_009483.1 3343439 3344758 D hypothetical protein 3343439..3344758 Geobacter uraniireducens Rf4 5166302 YP_001231628.1 CDS Gura_2883 NC_009483.1 3344984 3345628 D PFAM: Myosin, N-terminal, SH3 domain protein; myosin N-terminal SH3-like domain-containing protein 3344984..3345628 Geobacter uraniireducens Rf4 5166303 YP_001231629.1 CDS Gura_2884 NC_009483.1 3345891 3347105 D PFAM: transposase, mutator type; transposase, mutator type 3345891..3347105 Geobacter uraniireducens Rf4 5164879 YP_001231630.1 CDS Gura_2885 NC_009483.1 3347255 3347551 D PFAM: protein of unknown function DUF1568; hypothetical protein 3347255..3347551 Geobacter uraniireducens Rf4 5164880 YP_001231631.1 CDS Gura_2886 NC_009483.1 3347760 3348935 R PFAM: transposase, IS4 family protein; transposase, IS4 family protein complement(3347760..3348935) Geobacter uraniireducens Rf4 5164881 YP_001231632.1 CDS Gura_2887 NC_009483.1 3349089 3349817 D PFAM: protein of unknown function DUF1568; hypothetical protein 3349089..3349817 Geobacter uraniireducens Rf4 5162670 YP_001231633.1 CDS Gura_2888 NC_009483.1 3350002 3350505 R hypothetical protein complement(3350002..3350505) Geobacter uraniireducens Rf4 5162671 YP_001231634.1 CDS Gura_2889 NC_009483.1 3350960 3352126 D PFAM: Alkaline phosphatase; alkaline phosphatase 3350960..3352126 Geobacter uraniireducens Rf4 5162672 YP_001231635.1 CDS Gura_2890 NC_009483.1 3352149 3353693 D PFAM: protein of unknown function DUF1566; hypothetical protein 3352149..3353693 Geobacter uraniireducens Rf4 5166081 YP_001231636.1 CDS Gura_2891 NC_009483.1 3353843 3355138 D PFAM: peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 3353843..3355138 Geobacter uraniireducens Rf4 5166082 YP_001231637.1 CDS Gura_2892 NC_009483.1 3355595 3356230 D hypothetical protein 3355595..3356230 Geobacter uraniireducens Rf4 5166083 YP_001231638.1 CDS Gura_2893 NC_009483.1 3356263 3356610 R hypothetical protein complement(3356263..3356610) Geobacter uraniireducens Rf4 5163411 YP_001231639.1 CDS Gura_2894 NC_009483.1 3356762 3357865 D PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase 3356762..3357865 Geobacter uraniireducens Rf4 5163412 YP_001231640.1 CDS Gura_2895 NC_009483.1 3357954 3359045 D PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Glu/Leu/Phe/Val dehydrogenase 3357954..3359045 Geobacter uraniireducens Rf4 5163413 YP_001231641.1 CDS Gura_2896 NC_009483.1 3359030 3359713 R acyl-CoA synthetase complement(3359030..3359713) Geobacter uraniireducens Rf4 5164425 YP_001231642.1 CDS Gura_2897 NC_009483.1 3359710 3361065 R PFAM: CoA-binding domain protein; CoA-binding domain-containing protein complement(3359710..3361065) Geobacter uraniireducens Rf4 5164426 YP_001231643.1 CDS Gura_2898 NC_009483.1 3361189 3362361 R PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; branched-chain alpha-keto acid dehydrogenase subunit E2 complement(3361189..3362361) Geobacter uraniireducens Rf4 5164427 YP_001231644.1 CDS Gura_2899 NC_009483.1 3362561 3363523 R PFAM: Transketolase, central region; Transketolase domain protein; transketolase, central region complement(3362561..3363523) Geobacter uraniireducens Rf4 5163663 YP_001231645.1 CDS Gura_2900 NC_009483.1 3363525 3364580 R PFAM: dehydrogenase, E1 component; pyruvate dehydrogenase complement(3363525..3364580) Geobacter uraniireducens Rf4 5163664 YP_001231646.1 CDS Gura_2901 NC_009483.1 3364693 3365142 R hypothetical protein complement(3364693..3365142) Geobacter uraniireducens Rf4 5163665 YP_001231647.1 CDS Gura_2902 NC_009483.1 3365147 3365560 R PFAM: Activator of Hsp90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein complement(3365147..3365560) Geobacter uraniireducens Rf4 5164921 YP_001231648.1 CDS Gura_2903 NC_009483.1 3365626 3366828 R TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; putative PAS/PAC sensor protein complement(3365626..3366828) Geobacter uraniireducens Rf4 5164922 YP_001231649.1 CDS Gura_2904 NC_009483.1 3367014 3367811 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(3367014..3367811) Geobacter uraniireducens Rf4 5164923 YP_001231650.1 CDS Gura_2905 NC_009483.1 3368056 3370404 D TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; GAF domain protein; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; putative GAF sensor protein 3368056..3370404 Geobacter uraniireducens Rf4 5163590 YP_001231651.1 CDS Gura_2906 NC_009483.1 3370931 3371515 D PFAM: LemA family protein; LemA family protein 3370931..3371515 Geobacter uraniireducens Rf4 5163591 YP_001231652.1 CDS Gura_2907 NC_009483.1 3371578 3375024 R biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase complement(3371578..3375024) Geobacter uraniireducens Rf4 5163592 YP_001231653.1 CDS Gura_2908 NC_009483.1 3375282 3376307 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 3375282..3376307 Geobacter uraniireducens Rf4 5165223 YP_001231654.1 CDS Gura_2909 NC_009483.1 3376599 3376814 R hypothetical protein complement(3376599..3376814) Geobacter uraniireducens Rf4 5165224 YP_001231655.1 CDS Gura_2910 NC_009483.1 3376829 3377344 R PFAM: Ferritin, Dps family protein; ferroxidase complement(3376829..3377344) Geobacter uraniireducens Rf4 5165225 YP_001231656.1 CDS Gura_2911 NC_009483.1 3377480 3378994 R hypothetical protein complement(3377480..3378994) Geobacter uraniireducens Rf4 5165246 YP_001231657.1 CDS Gura_2912 NC_009483.1 3378998 3379765 R PFAM: band 7 protein; hypothetical protein complement(3378998..3379765) Geobacter uraniireducens Rf4 5165247 YP_001231658.1 CDS Gura_2913 NC_009483.1 3379847 3381118 R PFAM: protein of unknown function DUF107; hypothetical protein complement(3379847..3381118) Geobacter uraniireducens Rf4 5165248 YP_001231659.1 CDS Gura_2914 NC_009483.1 3381235 3382614 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 3381235..3382614 Geobacter uraniireducens Rf4 5165781 YP_001231660.1 CDS Gura_2915 NC_009483.1 3383080 3384228 D hypothetical protein 3383080..3384228 Geobacter uraniireducens Rf4 5165782 YP_001231661.1 CDS Gura_2916 NC_009483.1 3384513 3384923 D hypothetical protein 3384513..3384923 Geobacter uraniireducens Rf4 5165783 YP_001231662.1 CDS Gura_2917 NC_009483.1 3384938 3385792 D hypothetical protein 3384938..3385792 Geobacter uraniireducens Rf4 5166028 YP_001231663.1 CDS Gura_2918 NC_009483.1 3385898 3387511 D hypothetical protein 3385898..3387511 Geobacter uraniireducens Rf4 5166029 YP_001231664.1 CDS Gura_2919 NC_009483.1 3387508 3387939 D hypothetical protein 3387508..3387939 Geobacter uraniireducens Rf4 5166030 YP_001231665.1 CDS Gura_2920 NC_009483.1 3388147 3390186 D hypothetical protein 3388147..3390186 Geobacter uraniireducens Rf4 5166173 YP_001231666.1 CDS Gura_2921 NC_009483.1 3390252 3390884 D hypothetical protein 3390252..3390884 Geobacter uraniireducens Rf4 5166174 YP_001231667.1 CDS Gura_2922 NC_009483.1 3390881 3392314 D PFAM: AAA-4 family protein; putative transcriptional regulator 3390881..3392314 Geobacter uraniireducens Rf4 5166175 YP_001231668.1 CDS Gura_2923 NC_009483.1 3392485 3392928 R PFAM: thioesterase superfamily protein; thioesterase superfamily protein complement(3392485..3392928) Geobacter uraniireducens Rf4 5166631 YP_001231669.1 CDS Gura_2924 NC_009483.1 3393169 3394473 R PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase complement(3393169..3394473) Geobacter uraniireducens Rf4 5166632 YP_001231670.1 CDS Gura_2925 NC_009483.1 3395209 3395988 R TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; phage SPO1 DNA polymerase-like protein complement(3395209..3395988) Geobacter uraniireducens Rf4 5166633 YP_001231671.1 CDS Gura_2926 NC_009483.1 3396036 3396944 D hypothetical protein 3396036..3396944 Geobacter uraniireducens Rf4 5163889 YP_001231672.1 CDS Gura_2927 NC_009483.1 3396967 3398178 R TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase complement(3396967..3398178) Geobacter uraniireducens Rf4 5163890 YP_001231673.1 CDS Gura_2928 NC_009483.1 3398189 3398944 R PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein complement(3398189..3398944) Geobacter uraniireducens Rf4 5163891 YP_001231674.1 CDS Gura_2929 NC_009483.1 3398964 3400064 R TIGRFAM: metal dependent phophohydrolase; PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(3398964..3400064) Geobacter uraniireducens Rf4 5166926 YP_001231675.1 CDS Gura_2930 NC_009483.1 3400133 3401746 R hypothetical protein complement(3400133..3401746) Geobacter uraniireducens Rf4 5166927 YP_001231676.1 CDS Gura_2931 NC_009483.1 3401756 3402160 R PFAM: response regulator receiver; response regulator receiver protein complement(3401756..3402160) Geobacter uraniireducens Rf4 5166928 YP_001231677.1 CDS Gura_2932 NC_009483.1 3402282 3403466 R PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; response regulator receiver sensor signal transduction histidine kinase complement(3402282..3403466) Geobacter uraniireducens Rf4 5162627 YP_001231678.1 CDS Gura_2933 NC_009483.1 3403628 3404071 R PFAM: UspA domain protein; UspA domain-containing protein complement(3403628..3404071) Geobacter uraniireducens Rf4 5162628 YP_001231679.1 CDS Gura_2934 NC_009483.1 3404097 3404486 R PFAM: response regulator receiver; response regulator receiver protein complement(3404097..3404486) Geobacter uraniireducens Rf4 5162629 YP_001231680.1 CDS Gura_2935 NC_009483.1 3404555 3405283 R PFAM: GAF domain protein; putative GAF sensor protein complement(3404555..3405283) Geobacter uraniireducens Rf4 5165174 YP_001231681.1 CDS Gura_2936 NC_009483.1 3405390 3406223 R SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(3405390..3406223) Geobacter uraniireducens Rf4 5165175 YP_001231682.1 CDS Gura_2937 NC_009483.1 3406229 3406975 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein complement(3406229..3406975) Geobacter uraniireducens Rf4 5165176 YP_001231683.1 CDS Gura_2938 NC_009483.1 3407115 3408029 R PFAM: PfkB domain protein; ribokinase-like domain-containing protein complement(3407115..3408029) Geobacter uraniireducens Rf4 5164133 YP_001231684.1 CDS rpsA NC_009483.1 3408072 3409283 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(3408072..3409283) Geobacter uraniireducens Rf4 5164134 YP_001231685.1 CDS Gura_2940 NC_009483.1 3409624 3410163 D hypothetical protein 3409624..3410163 Geobacter uraniireducens Rf4 5164135 YP_001231686.1 CDS Gura_2941 NC_009483.1 3410199 3410381 D hypothetical protein 3410199..3410381 Geobacter uraniireducens Rf4 5164714 YP_001231687.1 CDS Gura_2942 NC_009483.1 3410408 3411298 R TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RluA family pseudouridine synthase complement(3410408..3411298) Geobacter uraniireducens Rf4 5164715 YP_001231688.1 CDS Gura_2943 NC_009483.1 3411914 3412255 D hypothetical protein 3411914..3412255 Geobacter uraniireducens Rf4 5164716 YP_001231689.1 CDS Gura_2944 NC_009483.1 3412719 3413033 D hypothetical protein 3412719..3413033 Geobacter uraniireducens Rf4 5164550 YP_001231690.1 CDS Gura_2945 NC_009483.1 3413138 3413737 D hypothetical protein 3413138..3413737 Geobacter uraniireducens Rf4 5164551 YP_001231691.1 CDS Gura_2946 NC_009483.1 3413813 3414379 R hypothetical protein complement(3413813..3414379) Geobacter uraniireducens Rf4 5164552 YP_001231692.1 CDS Gura_2947 NC_009483.1 3414631 3414924 D hypothetical protein 3414631..3414924 Geobacter uraniireducens Rf4 5165016 YP_001231693.1 CDS Gura_2948 NC_009483.1 3415013 3415453 R hypothetical protein complement(3415013..3415453) Geobacter uraniireducens Rf4 5165017 YP_001231694.1 CDS Gura_2949 NC_009483.1 3415644 3417281 D PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3415644..3417281 Geobacter uraniireducens Rf4 5165018 YP_001231695.1 CDS Gura_2950 NC_009483.1 3417694 3418689 D poly-gamma-glutamate biosynthesis protein 3417694..3418689 Geobacter uraniireducens Rf4 5164933 YP_001231696.1 CDS Gura_2951 NC_009483.1 3418955 3419686 D PFAM: Roadblock/LC7 family protein; roadblock/LC7 family protein 3418955..3419686 Geobacter uraniireducens Rf4 5164934 YP_001231697.1 CDS Gura_2952 NC_009483.1 3419750 3420496 D hypothetical protein 3419750..3420496 Geobacter uraniireducens Rf4 5164935 YP_001231698.1 CDS lpxC NC_009483.1 3420529 3421356 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(3420529..3421356) Geobacter uraniireducens Rf4 5165899 YP_001231699.1 CDS Gura_2954 NC_009483.1 3421573 3422064 R hypothetical protein complement(3421573..3422064) Geobacter uraniireducens Rf4 5165900 YP_001231700.1 CDS Gura_2955 NC_009483.1 3422097 3422459 R hypothetical protein complement(3422097..3422459) Geobacter uraniireducens Rf4 5165901 YP_001231701.1 CDS Gura_2956 NC_009483.1 3422456 3423040 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 complement(3422456..3423040) Geobacter uraniireducens Rf4 5164344 YP_001231702.1 CDS Gura_2957 NC_009483.1 3423151 3423666 R PFAM: protein of unknown function DUF985; hypothetical protein complement(3423151..3423666) Geobacter uraniireducens Rf4 5164345 YP_001231703.1 CDS asnC NC_009483.1 3423667 3425052 R catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase complement(3423667..3425052) Geobacter uraniireducens Rf4 5164346 YP_001231704.1 CDS Gura_2959 NC_009483.1 3425217 3425591 D PFAM: PDZ/DHR/GLGF domain protein; PDZ/DHR/GLGF domain-containing protein 3425217..3425591 Geobacter uraniireducens Rf4 5163381 YP_001231705.1 CDS Gura_2960 NC_009483.1 3425642 3426019 D TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin; YruB family glutaredoxin-like protein 3425642..3426019 Geobacter uraniireducens Rf4 5163382 YP_001231706.1 CDS Gura_2961 NC_009483.1 3426119 3426499 R hypothetical protein complement(3426119..3426499) Geobacter uraniireducens Rf4 5163383 YP_001231707.1 CDS Gura_2962 NC_009483.1 3426492 3427358 R PFAM: YdjC family protein; hypothetical protein complement(3426492..3427358) Geobacter uraniireducens Rf4 5165562 YP_001231708.1 CDS Gura_2963 NC_009483.1 3427371 3428801 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(3427371..3428801) Geobacter uraniireducens Rf4 5165563 YP_001231709.1 CDS Gura_2964 NC_009483.1 3428961 3429743 D PFAM: purine or other phosphorylase, family 1; purine phosphorylase family 1 3428961..3429743 Geobacter uraniireducens Rf4 5165564 YP_001231710.1 CDS Gura_2965 NC_009483.1 3429873 3431639 R TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; phosphoenolpyruvate-protein phosphotransferase complement(3429873..3431639) Geobacter uraniireducens Rf4 5164681 YP_001231711.1 CDS Gura_2966 NC_009483.1 3431620 3431886 R TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; phosphotransferase system, phosphocarrier protein HPr complement(3431620..3431886) Geobacter uraniireducens Rf4 5164682 YP_001231712.1 CDS Gura_2967 NC_009483.1 3431913 3432308 R PFAM: PTS system fructose subfamily IIA component; PTS system fructose subfamily transporter subunit IIA complement(3431913..3432308) Geobacter uraniireducens Rf4 5164683 YP_001231713.1 CDS Gura_2968 NC_009483.1 3432305 3433171 R PFAM: uncharacterised P-loop ATPase protein UPF0042; hypothetical protein complement(3432305..3433171) Geobacter uraniireducens Rf4 5165235 YP_001231714.1 CDS Gura_2969 NC_009483.1 3433173 3434132 R catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase complement(3433173..3434132) Geobacter uraniireducens Rf4 5165236 YP_001231715.1 CDS Gura_2970 NC_009483.1 3434129 3434599 R PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; putative PTS IIA-like nitrogen-regulatory protein PtsN complement(3434129..3434599) Geobacter uraniireducens Rf4 5165237 YP_001231716.1 CDS Gura_2971 NC_009483.1 3434608 3435153 R TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; sigma-54 modulation protein/ribosomal protein S30EA complement(3434608..3435153) Geobacter uraniireducens Rf4 5162879 YP_001231717.1 CDS Gura_2972 NC_009483.1 3435238 3436683 R TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor, core-binding region; sigma-54, DNA-binding domain protein; RNA polymerase sigma-54 subunit RpoN complement(3435238..3436683) Geobacter uraniireducens Rf4 5162880 YP_001231718.1 CDS Gura_2973 NC_009483.1 3436784 3437524 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3436784..3437524) Geobacter uraniireducens Rf4 5162881 YP_001231719.1 CDS Gura_2974 NC_009483.1 3437505 3438014 R PFAM: OstA family protein; OstA family protein complement(3437505..3438014) Geobacter uraniireducens Rf4 5163925 YP_001231720.1 CDS Gura_2975 NC_009483.1 3438011 3438586 R PFAM: protein of unknown function DUF1239; hypothetical protein complement(3438011..3438586) Geobacter uraniireducens Rf4 5163926 YP_001231721.1 CDS Gura_2976 NC_009483.1 3438743 3439258 R TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(3438743..3439258) Geobacter uraniireducens Rf4 5163927 YP_001231722.1 CDS Gura_2977 NC_009483.1 3439349 3440314 R TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein complement(3439349..3440314) Geobacter uraniireducens Rf4 5165724 YP_001231723.1 CDS Gura_2978 NC_009483.1 3440528 3441346 R catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase complement(3440528..3441346) Geobacter uraniireducens Rf4 5165725 YP_001231724.1 CDS pyrG NC_009483.1 3441479 3443083 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(3441479..3443083) Geobacter uraniireducens Rf4 5165726 YP_001231725.1 CDS Gura_2980 NC_009483.1 3443168 3443923 R CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase complement(3443168..3443923) Geobacter uraniireducens Rf4 5163724 YP_001231726.1 CDS Gura_2981 NC_009483.1 3444030 3445268 R PFAM: EAL domain protein; HDOD; diguanylate phosphodiesterase complement(3444030..3445268) Geobacter uraniireducens Rf4 5163725 YP_001231727.1 CDS Gura_2982 NC_009483.1 3445313 3446380 R PFAM: CheB methylesterase; response regulator receiver; response regulator receiver modulated CheB methylesterase complement(3445313..3446380) Geobacter uraniireducens Rf4 5163726 YP_001231728.1 CDS Gura_2983 NC_009483.1 3446451 3446978 R PFAM: CheD family protein; CheD, stimulates methylation of MCP protein complement(3446451..3446978) Geobacter uraniireducens Rf4 5167034 YP_001231729.1 CDS Gura_2984 NC_009483.1 3446975 3447832 R PFAM: MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase complement(3446975..3447832) Geobacter uraniireducens Rf4 5167035 YP_001231730.1 CDS Gura_2985 NC_009483.1 3448069 3449799 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3448069..3449799) Geobacter uraniireducens Rf4 5167036 YP_001231731.1 CDS Gura_2986 NC_009483.1 3449879 3450367 R PFAM: CheW domain protein; putative CheW protein complement(3449879..3450367) Geobacter uraniireducens Rf4 5165341 YP_001231732.1 CDS Gura_2987 NC_009483.1 3450770 3451174 R PFAM: response regulator receiver; response regulator receiver protein complement(3450770..3451174) Geobacter uraniireducens Rf4 5165342 YP_001231733.1 CDS Gura_2988 NC_009483.1 3451207 3452766 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase complement(3451207..3452766) Geobacter uraniireducens Rf4 5165343 YP_001231734.1 CDS Gura_2989 NC_009483.1 3453011 3456292 R TIGRFAM: PAS sensor protein; PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; methyl-accepting chemotaxis sensory transducer complement(3453011..3456292) Geobacter uraniireducens Rf4 5165976 YP_001231735.1 CDS Gura_2990 NC_009483.1 3456489 3456740 R hypothetical protein complement(3456489..3456740) Geobacter uraniireducens Rf4 5165977 YP_001231736.1 CDS Gura_2991 NC_009483.1 3456791 3457300 R PFAM: CheW domain protein; putative CheW protein complement(3456791..3457300) Geobacter uraniireducens Rf4 5165978 YP_001231737.1 CDS Gura_2992 NC_009483.1 3457382 3459583 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3457382..3459583) Geobacter uraniireducens Rf4 5164903 YP_001231738.1 CDS Gura_2993 NC_009483.1 3460029 3462167 R PFAM: CheW domain protein; ATP-binding region, ATPase domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; CheA signal transduction histidine kinase complement(3460029..3462167) Geobacter uraniireducens Rf4 5164904 YP_001231739.1 CDS Gura_2994 NC_009483.1 3462164 3462529 R PFAM: response regulator receiver; response regulator receiver protein complement(3462164..3462529) Geobacter uraniireducens Rf4 5164905 YP_001231740.1 CDS Gura_2995 NC_009483.1 3462529 3462891 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulfate transporter/antisigma-factor antagonist STAS complement(3462529..3462891) Geobacter uraniireducens Rf4 5166667 YP_001231741.1 CDS Gura_2996 NC_009483.1 3462922 3464835 R methyl-accepting chemotaxis sensory transducer complement(3462922..3464835) Geobacter uraniireducens Rf4 5166668 YP_001231742.1 CDS Gura_2997 NC_009483.1 3465185 3465658 R hypothetical protein complement(3465185..3465658) Geobacter uraniireducens Rf4 5166669 YP_001231743.1 CDS Gura_2998 NC_009483.1 3465843 3466133 D hypothetical protein 3465843..3466133 Geobacter uraniireducens Rf4 5166489 YP_001231744.1 CDS Gura_2999 NC_009483.1 3466209 3466853 R PFAM: iron dependent repressor; FeoA family protein; iron dependent repressor complement(3466209..3466853) Geobacter uraniireducens Rf4 5166490 YP_001231745.1 CDS Gura_3000 NC_009483.1 3466926 3467105 R hypothetical protein complement(3466926..3467105) Geobacter uraniireducens Rf4 5166491 YP_001231746.1 CDS Gura_3001 NC_009483.1 3467243 3469231 R TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; ferrous iron transport protein B complement(3467243..3469231) Geobacter uraniireducens Rf4 5166483 YP_001231747.1 CDS Gura_3002 NC_009483.1 3469304 3469765 R PFAM: ferric-uptake regulator; ferric uptake regulator family protein complement(3469304..3469765) Geobacter uraniireducens Rf4 5166484 YP_001231748.1 CDS Gura_3003 NC_009483.1 3469970 3472228 D TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: NHL repeat containing protein; Ig domain protein, group 2 domain protein; YVTN beta-propeller repeat-containing protein 3469970..3472228 Geobacter uraniireducens Rf4 5166485 YP_001231749.1 CDS Gura_3004 NC_009483.1 3472651 3473439 R protein-disulfide isomerase-like protein complement(3472651..3473439) Geobacter uraniireducens Rf4 5164416 YP_001231750.1 CDS Gura_3005 NC_009483.1 3473553 3474947 R catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase complement(3473553..3474947) Geobacter uraniireducens Rf4 5164417 YP_001231751.1 CDS Gura_3006 NC_009483.1 3475060 3475977 R PFAM: regulatory protein, ArsR; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(3475060..3475977) Geobacter uraniireducens Rf4 5164418 YP_001231752.1 CDS Gura_3007 NC_009483.1 3476448 3477587 R PFAM: 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase complement(3476448..3477587) Geobacter uraniireducens Rf4 5165585 YP_001231753.1 CDS Gura_3008 NC_009483.1 3477729 3478043 D TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; XRE family plasmid maintenance system antidote protein 3477729..3478043 Geobacter uraniireducens Rf4 5165586 YP_001231754.1 CDS Gura_3009 NC_009483.1 3478089 3478373 D hypothetical protein 3478089..3478373 Geobacter uraniireducens Rf4 5165587 YP_001231755.1 CDS Gura_3010 NC_009483.1 3478416 3480596 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 3478416..3480596 Geobacter uraniireducens Rf4 5165676 YP_001231756.1 CDS Gura_3011 NC_009483.1 3480740 3495025 R SMART: LamG domain protein jellyroll fold domain protein; LamG domain-containing protein complement(3480740..3495025) Geobacter uraniireducens Rf4 5165677 YP_001231757.1 CDS Gura_3012 NC_009483.1 3495127 3495378 D TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; AbrB family transcriptional regulator 3495127..3495378 Geobacter uraniireducens Rf4 5165678 YP_001231758.1 CDS Gura_3013 NC_009483.1 3495375 3495776 D PFAM: PilT protein domain protein; PilT domain-containing protein 3495375..3495776 Geobacter uraniireducens Rf4 5162955 YP_001231759.1 CDS Gura_3014 NC_009483.1 3495883 3496884 R hypothetical protein complement(3495883..3496884) Geobacter uraniireducens Rf4 5162956 YP_001231760.1 CDS Gura_3015 NC_009483.1 3496930 3497940 R hypothetical protein complement(3496930..3497940) Geobacter uraniireducens Rf4 5162957 YP_001231761.1 CDS Gura_3016 NC_009483.1 3498270 3499208 R PFAM: protein of unknown function DUF1568; SMART: Chromosomal replication initiator, DnaA C-terminal domain; hypothetical protein complement(3498270..3499208) Geobacter uraniireducens Rf4 5163129 YP_001231762.1 CDS Gura_3017 NC_009483.1 3499291 3499623 R hypothetical protein complement(3499291..3499623) Geobacter uraniireducens Rf4 5163130 YP_001231763.1 CDS Gura_3018 NC_009483.1 3499668 3500633 R hypothetical protein complement(3499668..3500633) Geobacter uraniireducens Rf4 5163131 YP_001231764.1 CDS Gura_3019 NC_009483.1 3500641 3503226 R hypothetical protein complement(3500641..3503226) Geobacter uraniireducens Rf4 5166766 YP_001231765.1 CDS Gura_3020 NC_009483.1 3503223 3504173 R PFAM: protein of unknown function DUF1568; hypothetical protein complement(3503223..3504173) Geobacter uraniireducens Rf4 5166767 YP_001231766.1 CDS Gura_3021 NC_009483.1 3504505 3505461 R hypothetical protein complement(3504505..3505461) Geobacter uraniireducens Rf4 5166768 YP_001231767.1 CDS Gura_3022 NC_009483.1 3505465 3516225 R hypothetical protein complement(3505465..3516225) Geobacter uraniireducens Rf4 5165691 YP_001231768.1 CDS Gura_3023 NC_009483.1 3516642 3517964 R PFAM: peptidase S41; peptidase S41 complement(3516642..3517964) Geobacter uraniireducens Rf4 5165692 YP_001231769.1 CDS Gura_3024 NC_009483.1 3518031 3519749 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(3518031..3519749) Geobacter uraniireducens Rf4 5165693 YP_001231770.1 CDS Gura_3025 NC_009483.1 3519895 3520449 R hypothetical protein complement(3519895..3520449) Geobacter uraniireducens Rf4 5163856 YP_001231771.1 CDS Gura_3026 NC_009483.1 3520689 3521222 D hypothetical protein 3520689..3521222 Geobacter uraniireducens Rf4 5163857 YP_001231772.1 CDS Gura_3027 NC_009483.1 3521219 3522244 D PFAM: Integrase, catalytic region; integrase catalytic subunit 3521219..3522244 Geobacter uraniireducens Rf4 5163858 YP_001231773.1 CDS Gura_3028 NC_009483.1 3522155 3522892 R PFAM: Integrase, catalytic region; integrase catalytic subunit complement(3522155..3522892) Geobacter uraniireducens Rf4 5165010 YP_001231774.1 CDS Gura_3029 NC_009483.1 3522928 3523221 R hypothetical protein complement(3522928..3523221) Geobacter uraniireducens Rf4 5165011 YP_001231775.1 CDS Gura_3030 NC_009483.1 3524200 3524622 R hypothetical protein complement(3524200..3524622) Geobacter uraniireducens Rf4 5165012 YP_001231776.1 CDS Gura_3031 NC_009483.1 3524832 3526229 R hypothetical protein complement(3524832..3526229) Geobacter uraniireducens Rf4 5165306 YP_001231777.1 CDS Gura_3032 NC_009483.1 3526481 3527155 R hypothetical protein complement(3526481..3527155) Geobacter uraniireducens Rf4 5165307 YP_001231778.1 CDS Gura_3033 NC_009483.1 3527269 3527676 R hypothetical protein complement(3527269..3527676) Geobacter uraniireducens Rf4 5165308 YP_001231779.1 CDS Gura_3034 NC_009483.1 3528255 3529082 R PFAM: coenzyme A transferase; glutaconate CoA-transferase complement(3528255..3529082) Geobacter uraniireducens Rf4 5165347 YP_001231780.1 CDS Gura_3035 NC_009483.1 3529084 3530049 R PFAM: coenzyme A transferase; glutaconate CoA-transferase complement(3529084..3530049) Geobacter uraniireducens Rf4 5165348 YP_001231781.1 CDS Gura_3036 NC_009483.1 3530320 3531477 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein complement(3530320..3531477) Geobacter uraniireducens Rf4 5165349 YP_001231782.1 CDS Gura_3037 NC_009483.1 3531714 3532631 R PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha complement(3531714..3532631) Geobacter uraniireducens Rf4 5165435 YP_001231783.1 CDS Gura_3038 NC_009483.1 3532912 3533772 R PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta complement(3532912..3533772) Geobacter uraniireducens Rf4 5165436 YP_001231784.1 CDS Gura_3039 NC_009483.1 3533826 3535811 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein complement(3533826..3535811) Geobacter uraniireducens Rf4 5165437 YP_001231785.1 CDS Gura_3040 NC_009483.1 3535924 3537132 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein complement(3535924..3537132) Geobacter uraniireducens Rf4 5165546 YP_001231786.1 CDS Gura_3041 NC_009483.1 3537160 3537942 R PFAM: Enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(3537160..3537942) Geobacter uraniireducens Rf4 5165547 YP_001231787.1 CDS Gura_3042 NC_009483.1 3538143 3538988 R PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; 3-hydroxybutyryl-CoA dehydrogenase complement(3538143..3538988) Geobacter uraniireducens Rf4 5165548 YP_001231788.1 CDS Gura_3043 NC_009483.1 3539118 3540293 R TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(3539118..3540293) Geobacter uraniireducens Rf4 5166438 YP_001231789.1 CDS Gura_3044 NC_009483.1 3540824 3541864 D PFAM: Helix-turn-helix, type 11 domain protein; helix-turn-helix, type 11 domain-containing protein 3540824..3541864 Geobacter uraniireducens Rf4 5166439 YP_001231790.1 CDS Gura_3045 NC_009483.1 3542051 3543742 R PFAM: chemotaxis sensory transducer; Cache, type 2 domain protein; methyl-accepting chemotaxis sensory transducer complement(3542051..3543742) Geobacter uraniireducens Rf4 5166440 YP_001231791.1 CDS Gura_3046 NC_009483.1 3544333 3546135 D PFAM: glycosyl transferase, family 4; FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 3544333..3546135 Geobacter uraniireducens Rf4 5166492 YP_001231792.1 CDS Gura_3047 NC_009483.1 3546201 3546650 D hypothetical protein 3546201..3546650 Geobacter uraniireducens Rf4 5166493 YP_001231793.1 CDS Gura_3048 NC_009483.1 3546762 3550688 D PFAM: multicopper oxidase, type 2; FG-GAP repeat protein; multicopper oxidase, type 2 3546762..3550688 Geobacter uraniireducens Rf4 5166494 YP_001231794.1 CDS Gura_3049 NC_009483.1 3550869 3551087 D hypothetical protein 3550869..3551087 Geobacter uraniireducens Rf4 5167060 YP_001231795.1 CDS Gura_3051 NC_009483.1 3551419 3552510 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(3551419..3552510) Geobacter uraniireducens Rf4 5167062 YP_001231796.1 CDS Gura_3052 NC_009483.1 3552494 3553540 R PFAM: glycoside hydrolase, family 20; glycoside hydrolase family protein complement(3552494..3553540) Geobacter uraniireducens Rf4 5166513 YP_001231797.1 CDS Gura_3053 NC_009483.1 3553582 3554580 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 12 methyltransferase complement(3553582..3554580) Geobacter uraniireducens Rf4 5166514 YP_001231798.1 CDS Gura_3054 NC_009483.1 3554645 3555556 R glycosyltransferase-like protein complement(3554645..3555556) Geobacter uraniireducens Rf4 5166515 YP_001231799.1 CDS Gura_3055 NC_009483.1 3555637 3556743 R hypothetical protein complement(3555637..3556743) Geobacter uraniireducens Rf4 5165321 YP_001231800.1 CDS Gura_3056 NC_009483.1 3556840 3557721 R hypothetical protein complement(3556840..3557721) Geobacter uraniireducens Rf4 5165322 YP_001231801.1 CDS Gura_3057 NC_009483.1 3557721 3558677 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(3557721..3558677) Geobacter uraniireducens Rf4 5165323 YP_001231802.1 CDS Gura_3058 NC_009483.1 3558700 3559656 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 12 methyltransferase complement(3558700..3559656) Geobacter uraniireducens Rf4 5163417 YP_001231803.1 CDS Gura_3059 NC_009483.1 3559653 3560369 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(3559653..3560369) Geobacter uraniireducens Rf4 5163418 YP_001231804.1 CDS Gura_3060 NC_009483.1 3560359 3561648 R PFAM: virulence factor MVIN family protein; virulence factor MVIN family protein complement(3560359..3561648) Geobacter uraniireducens Rf4 5163419 YP_001231805.1 CDS Gura_3061 NC_009483.1 3561645 3562895 R PFAM: lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein complement(3561645..3562895) Geobacter uraniireducens Rf4 5166799 YP_001231806.1 CDS Gura_3062 NC_009483.1 3563129 3565633 R PFAM: polysaccharide export protein; polysaccharide export protein complement(3563129..3565633) Geobacter uraniireducens Rf4 5166800 YP_001231807.1 CDS Gura_3063 NC_009483.1 3566182 3567783 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3566182..3567783) Geobacter uraniireducens Rf4 5166801 YP_001231808.1 CDS Gura_3064 NC_009483.1 3567959 3568309 D hypothetical protein 3567959..3568309 Geobacter uraniireducens Rf4 5165579 YP_001231809.1 CDS Gura_3065 NC_009483.1 3568394 3570004 R hypothetical protein complement(3568394..3570004) Geobacter uraniireducens Rf4 5165580 YP_001231810.1 CDS Gura_3066 NC_009483.1 3570362 3572011 D PFAM: Cache, type 2 domain protein; cache type 2 domain-containing protein 3570362..3572011 Geobacter uraniireducens Rf4 5165581 YP_001231811.1 CDS Gura_3067 NC_009483.1 3572213 3573337 D PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 3572213..3573337 Geobacter uraniireducens Rf4 5163295 YP_001231812.1 CDS Gura_3068 NC_009483.1 3573478 3574947 D PFAM: Ricin B lectin; Ricin B lectin 3573478..3574947 Geobacter uraniireducens Rf4 5163296 YP_001231813.1 CDS Gura_3069 NC_009483.1 3575116 3576045 D PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 3575116..3576045 Geobacter uraniireducens Rf4 5163297 YP_001231814.1 CDS Gura_3070 NC_009483.1 3576089 3577543 R hypothetical protein complement(3576089..3577543) Geobacter uraniireducens Rf4 5166805 YP_001231815.1 CDS Gura_3071 NC_009483.1 3577554 3578054 R hypothetical protein complement(3577554..3578054) Geobacter uraniireducens Rf4 5166806 YP_001231816.1 CDS Gura_3072 NC_009483.1 3578051 3578551 R PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(3578051..3578551) Geobacter uraniireducens Rf4 5166807 YP_001231817.1 CDS Gura_3073 NC_009483.1 3578564 3579199 R PFAM: MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel complement(3578564..3579199) Geobacter uraniireducens Rf4 5163135 YP_001231818.1 CDS Gura_3074 NC_009483.1 3579408 3579728 R hypothetical protein complement(3579408..3579728) Geobacter uraniireducens Rf4 5163136 YP_001231819.1 CDS Gura_3075 NC_009483.1 3579762 3580484 R PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein complement(3579762..3580484) Geobacter uraniireducens Rf4 5163137 YP_001231820.1 CDS Gura_3076 NC_009483.1 3580522 3583848 R PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein complement(3580522..3583848) Geobacter uraniireducens Rf4 5166170 YP_001231821.1 CDS Gura_3077 NC_009483.1 3583845 3585734 R hypothetical protein complement(3583845..3585734) Geobacter uraniireducens Rf4 5166171 YP_001231822.1 CDS Gura_3078 NC_009483.1 3585738 3586328 R hypothetical protein complement(3585738..3586328) Geobacter uraniireducens Rf4 5166172 YP_001231823.1 CDS Gura_3079 NC_009483.1 3586424 3591526 R PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein complement(3586424..3591526) Geobacter uraniireducens Rf4 5166292 YP_001231824.1 CDS Gura_3080 NC_009483.1 3591832 3600393 R TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; hypothetical protein complement(3591832..3600393) Geobacter uraniireducens Rf4 5166293 YP_001231825.1 CDS Gura_3081 NC_009483.1 3600778 3601047 R hypothetical protein complement(3600778..3601047) Geobacter uraniireducens Rf4 5166294 YP_001231826.1 CDS Gura_3082 NC_009483.1 3601884 3603197 D PFAM: phage integrase family protein; phage integrase family protein 3601884..3603197 Geobacter uraniireducens Rf4 5162970 YP_001231827.1 CDS Gura_3083 NC_009483.1 3603321 3603923 D transcriptional regulator-like protein 3603321..3603923 Geobacter uraniireducens Rf4 5162971 YP_001231828.1 CDS Gura_3089 NC_009483.1 3608342 3609676 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 3608342..3609676 Geobacter uraniireducens Rf4 5163485 YP_001231829.1 CDS Gura_3091 NC_009483.1 3611298 3612302 D PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein 3611298..3612302 Geobacter uraniireducens Rf4 5164617 YP_001231830.1 CDS Gura_3092 NC_009483.1 3612299 3613819 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA family drug resistance transporter 3612299..3613819 Geobacter uraniireducens Rf4 5164618 YP_001231831.1 CDS Gura_3093 NC_009483.1 3613915 3615147 R TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; malonyl CoA-acyl carrier protein transacylase complement(3613915..3615147) Geobacter uraniireducens Rf4 5164619 YP_001231832.1 CDS Gura_3094 NC_009483.1 3615183 3618971 R PFAM: beta-ketoacyl synthase; phosphopantetheine-binding; erythronolide synthase complement(3615183..3618971) Geobacter uraniireducens Rf4 5165109 YP_001231833.1 CDS Gura_3095 NC_009483.1 3618955 3640428 R PFAM: beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; beta-ketoacyl synthase complement(3618955..3640428) Geobacter uraniireducens Rf4 5165110 YP_001231834.1 CDS Gura_3096 NC_009483.1 3640746 3644693 R PFAM: beta-ketoacyl synthase; phosphopantetheine-binding; erythronolide synthase complement(3640746..3644693) Geobacter uraniireducens Rf4 5165111 YP_001231835.1 CDS Gura_3097 NC_009483.1 3644677 3659286 R PFAM: beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; beta-ketoacyl synthase complement(3644677..3659286) Geobacter uraniireducens Rf4 5164008 YP_001231836.1 CDS Gura_3098 NC_009483.1 3659289 3664442 R PFAM: beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR; mycocerosate synthase complement(3659289..3664442) Geobacter uraniireducens Rf4 5164009 YP_001231837.1 CDS Gura_3099 NC_009483.1 3665129 3666343 D PFAM: transposase, mutator type; transposase, mutator type 3665129..3666343 Geobacter uraniireducens Rf4 5164010 YP_001231838.1 CDS Gura_3100 NC_009483.1 3666467 3666625 R PFAM: Rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein complement(3666467..3666625) Geobacter uraniireducens Rf4 5164166 YP_001231839.1 CDS Gura_3101 NC_009483.1 3666680 3667816 R TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase, class V; Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; cysteine desulfurase complement(3666680..3667816) Geobacter uraniireducens Rf4 5164167 YP_001231840.1 CDS Gura_3102 NC_009483.1 3667925 3668938 R TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase complement(3667925..3668938) Geobacter uraniireducens Rf4 5164168 YP_001231841.1 CDS Gura_3103 NC_009483.1 3669201 3669551 R PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein complement(3669201..3669551) Geobacter uraniireducens Rf4 5164139 YP_001231842.1 CDS Gura_3104 NC_009483.1 3669963 3670763 R PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; response regulator receiver protein complement(3669963..3670763) Geobacter uraniireducens Rf4 5164140 YP_001231843.1 CDS Gura_3105 NC_009483.1 3670973 3673267 R TIGRFAM: malonyl CoA-acyl carrier protein transacylase; Malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; 2-nitropropane dioxygenase, NPD; malonyl CoA-acyl carrier protein transacylase complement(3670973..3673267) Geobacter uraniireducens Rf4 5164141 YP_001231844.1 CDS Gura_3106 NC_009483.1 3673285 3674250 R PFAM: acyl transferase domain protein; acyl transferase domain-containing protein complement(3673285..3674250) Geobacter uraniireducens Rf4 5164521 YP_001231845.1 CDS Gura_3107 NC_009483.1 3674286 3675119 R PFAM: 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase complement(3674286..3675119) Geobacter uraniireducens Rf4 5164522 YP_001231846.1 CDS Gura_3108 NC_009483.1 3675149 3675850 R PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein complement(3675149..3675850) Geobacter uraniireducens Rf4 5164523 YP_001231847.1 CDS Gura_3109 NC_009483.1 3677311 3678183 D PFAM: phage integrase family protein; phage integrase family protein 3677311..3678183 Geobacter uraniireducens Rf4 5165798 YP_001231848.1 CDS Gura_3110 NC_009483.1 3678183 3679280 D PFAM: putative transposase; putative transposase 3678183..3679280 Geobacter uraniireducens Rf4 5165799 YP_001231849.1 CDS Gura_3111 NC_009483.1 3679721 3680470 D N-acyl-L-homoserine lactone synthetase-like protein 3679721..3680470 Geobacter uraniireducens Rf4 5165800 YP_001231850.1 CDS Gura_3112 NC_009483.1 3680391 3681143 R PFAM: regulatory protein, LuxR; Autoinducer-binding domain protein; regulatory protein LuxR complement(3680391..3681143) Geobacter uraniireducens Rf4 5162655 YP_001231851.1 CDS Gura_3116 NC_009483.1 3683780 3684577 R transposase complement(3683780..3684577) Geobacter uraniireducens Rf4 5166794 YP_001231852.1 CDS Gura_3117 NC_009483.1 3684983 3685864 D hypothetical protein 3684983..3685864 Geobacter uraniireducens Rf4 5166795 YP_001231853.1 CDS Gura_3118 NC_009483.1 3685872 3686186 D hypothetical protein 3685872..3686186 Geobacter uraniireducens Rf4 5163853 YP_001231854.1 CDS Gura_3120 NC_009483.1 3687343 3688695 R PFAM: Polynucleotide adenylyltransferase region; polynucleotide adenylyltransferase complement(3687343..3688695) Geobacter uraniireducens Rf4 5166600 YP_001231855.1 CDS Gura_3121 NC_009483.1 3688792 3689109 R hypothetical protein complement(3688792..3689109) Geobacter uraniireducens Rf4 5166601 YP_001231856.1 CDS Gura_3122 NC_009483.1 3689202 3689846 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase complement(3689202..3689846) Geobacter uraniireducens Rf4 5164285 YP_001231857.1 CDS guaA NC_009483.1 3689900 3691450 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(3689900..3691450) Geobacter uraniireducens Rf4 5164286 YP_001231858.1 CDS Gura_3124 NC_009483.1 3691543 3693012 R TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase complement(3691543..3693012) Geobacter uraniireducens Rf4 5164287 YP_001231859.1 CDS Gura_3125 NC_009483.1 3693132 3694202 R PFAM: peptidase M20; peptidase M42 family protein; peptidase M42 family protein complement(3693132..3694202) Geobacter uraniireducens Rf4 5165368 YP_001231860.1 CDS Gura_3126 NC_009483.1 3694257 3694757 R PFAM: protein of unknown function DUF151; hypothetical protein complement(3694257..3694757) Geobacter uraniireducens Rf4 5165369 YP_001231861.1 CDS Gura_3127 NC_009483.1 3694797 3696119 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(3694797..3696119) Geobacter uraniireducens Rf4 5165370 YP_001231862.1 CDS Gura_3128 NC_009483.1 3696548 3698236 D hypothetical protein 3696548..3698236 Geobacter uraniireducens Rf4 5162852 YP_001231863.1 CDS Gura_3129 NC_009483.1 3698395 3698721 D hypothetical protein 3698395..3698721 Geobacter uraniireducens Rf4 5162853 YP_001231864.1 CDS Gura_3130 NC_009483.1 3698869 3700242 D hypothetical protein 3698869..3700242 Geobacter uraniireducens Rf4 5162854 YP_001231865.1 CDS rpsT NC_009483.1 3700429 3700692 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 3700429..3700692 Geobacter uraniireducens Rf4 5166778 YP_001231866.1 CDS Gura_3132 NC_009483.1 3700784 3701779 R TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; DNA polymerase III subunit delta complement(3700784..3701779) Geobacter uraniireducens Rf4 5166779 YP_001231867.1 CDS Gura_3133 NC_009483.1 3701868 3702386 R hypothetical protein complement(3701868..3702386) Geobacter uraniireducens Rf4 5166780 YP_001231868.1 CDS leuS NC_009483.1 3702407 3704881 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(3702407..3704881) Geobacter uraniireducens Rf4 5164939 YP_001231869.1 CDS Gura_3135 NC_009483.1 3705089 3707242 R hypothetical protein complement(3705089..3707242) Geobacter uraniireducens Rf4 5164940 YP_001231870.1 CDS Gura_3136 NC_009483.1 3707340 3707717 R PFAM: response regulator receiver; response regulator receiver protein complement(3707340..3707717) Geobacter uraniireducens Rf4 5164941 YP_001231871.1 CDS Gura_3137 NC_009483.1 3707803 3708627 R PFAM: GAF domain protein; putative GAF sensor protein complement(3707803..3708627) Geobacter uraniireducens Rf4 5165007 YP_001231872.1 CDS Gura_3138 NC_009483.1 3708651 3709736 R PFAM: CheB methylesterase; response regulator receiver; response regulator receiver modulated CheB methylesterase complement(3708651..3709736) Geobacter uraniireducens Rf4 5165008 YP_001231873.1 CDS Gura_3139 NC_009483.1 3709733 3710608 R PFAM: MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase complement(3709733..3710608) Geobacter uraniireducens Rf4 5165009 YP_001231874.1 CDS Gura_3140 NC_009483.1 3710608 3712620 R PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; HEAT repeat-containing PBS lyase complement(3710608..3712620) Geobacter uraniireducens Rf4 5163544 YP_001231875.1 CDS Gura_3141 NC_009483.1 3712660 3713634 R TIGRFAM: MJ0042 family finger-like protein; PFAM: response regulator receiver; response regulator receiver protein complement(3712660..3713634) Geobacter uraniireducens Rf4 5163545 YP_001231876.1 CDS Gura_3142 NC_009483.1 3713658 3714140 R PFAM: CheW domain protein; putative CheW protein complement(3713658..3714140) Geobacter uraniireducens Rf4 5163546 YP_001231877.1 CDS Gura_3143 NC_009483.1 3714197 3714571 R PFAM: response regulator receiver; response regulator receiver protein complement(3714197..3714571) Geobacter uraniireducens Rf4 5165519 YP_001231878.1 CDS Gura_3144 NC_009483.1 3714589 3715377 R PFAM: CheW domain protein; putative CheW protein complement(3714589..3715377) Geobacter uraniireducens Rf4 5165520 YP_001231879.1 CDS Gura_3145 NC_009483.1 3715396 3716196 R SMART: AAA ATPase; ATPase AAA complement(3715396..3716196) Geobacter uraniireducens Rf4 5165521 YP_001231880.1 CDS Gura_3146 NC_009483.1 3716197 3718212 R PFAM: CheW domain protein; ATP-binding region, ATPase domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; CheA signal transduction histidine kinase complement(3716197..3718212) Geobacter uraniireducens Rf4 5163874 YP_001231881.1 CDS Gura_3147 NC_009483.1 3718276 3718641 R PFAM: response regulator receiver; response regulator receiver protein complement(3718276..3718641) Geobacter uraniireducens Rf4 5163875 YP_001231882.1 CDS Gura_3148 NC_009483.1 3718638 3720341 R PFAM: response regulator receiver; response regulator receiver protein complement(3718638..3720341) Geobacter uraniireducens Rf4 5163876 YP_001231883.1 CDS engA NC_009483.1 3720423 3721748 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(3720423..3721748) Geobacter uraniireducens Rf4 5165482 YP_001231884.1 CDS era NC_009483.1 3721745 3722638 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(3721745..3722638) Geobacter uraniireducens Rf4 5165483 YP_001231885.1 CDS Gura_3151 NC_009483.1 3722724 3723779 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(3722724..3723779) Geobacter uraniireducens Rf4 5165484 YP_001231886.1 CDS Gura_3152 NC_009483.1 3723776 3724498 R PFAM: ribonuclease III; double-stranded RNA binding domain protein; ribonuclease III complement(3723776..3724498) Geobacter uraniireducens Rf4 5164063 YP_001231887.1 CDS Gura_3153 NC_009483.1 3724865 3725506 D PFAM: thymidylate kinase; dTMP kinase 3724865..3725506 Geobacter uraniireducens Rf4 5164064 YP_001231888.1 CDS Gura_3154 NC_009483.1 3725509 3726471 D TIGRFAM: DNA polymerase III, delta prime subunit; DNA polymerase III subunit delta' 3725509..3726471 Geobacter uraniireducens Rf4 5164065 YP_001231889.1 CDS Gura_3155 NC_009483.1 3726543 3727490 D PFAM: PSP1 domain protein; PSP1 domain-containing protein 3726543..3727490 Geobacter uraniireducens Rf4 5165106 YP_001231890.1 CDS Gura_3156 NC_009483.1 3727490 3729019 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 3727490..3729019 Geobacter uraniireducens Rf4 5165107 YP_001231891.1 CDS Gura_3157 NC_009483.1 3729163 3729762 R PFAM: protein of unknown function DUF218; hypothetical protein complement(3729163..3729762) Geobacter uraniireducens Rf4 5165108 YP_001231892.1 CDS rpmB NC_009483.1 3729871 3730062 D required for 70S ribosome assembly; 50S ribosomal protein L28 3729871..3730062 Geobacter uraniireducens Rf4 5165082 YP_001231893.1 CDS Gura_3159 NC_009483.1 3730220 3730603 R TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; putative endoribonuclease L-PSP complement(3730220..3730603) Geobacter uraniireducens Rf4 5165083 YP_001231894.1 CDS Gura_3160 NC_009483.1 3730692 3732842 R TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region; (p)ppGpp synthetase I SpoT/RelA complement(3730692..3732842) Geobacter uraniireducens Rf4 5165084 YP_001231895.1 CDS Gura_3161 NC_009483.1 3732956 3733165 R TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; DNA-directed RNA polymerase subunit omega complement(3732956..3733165) Geobacter uraniireducens Rf4 5164326 YP_001231896.1 CDS gmk NC_009483.1 3733205 3733813 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(3733205..3733813) Geobacter uraniireducens Rf4 5164327 YP_001231897.1 CDS Gura_3163 NC_009483.1 3733927 3734805 R PFAM: YicC N-terminal domain protein; domain of unknown function DUF1732; hypothetical protein complement(3733927..3734805) Geobacter uraniireducens Rf4 5164328 YP_001231898.1 CDS Gura_3164 NC_009483.1 3734873 3735274 R PFAM: PilT protein domain protein; PilT domain-containing protein complement(3734873..3735274) Geobacter uraniireducens Rf4 5163712 YP_001231899.1 CDS Gura_3165 NC_009483.1 3735271 3735519 R PFAM: CopG domain protein DNA-binding domain protein; CopG/DNA-binding domain-containing protein complement(3735271..3735519) Geobacter uraniireducens Rf4 5163713 YP_001231900.1 CDS Gura_3166 NC_009483.1 3735687 3735887 R hypothetical protein complement(3735687..3735887) Geobacter uraniireducens Rf4 5163714 YP_001231901.1 CDS Gura_3167 NC_009483.1 3736047 3736907 R hypothetical protein complement(3736047..3736907) Geobacter uraniireducens Rf4 5163576 YP_001231902.1 CDS Gura_3168 NC_009483.1 3736927 3737895 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(3736927..3737895) Geobacter uraniireducens Rf4 5163577 YP_001231903.1 CDS Gura_3169 NC_009483.1 3737906 3739276 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(3737906..3739276) Geobacter uraniireducens Rf4 5163578 YP_001231904.1 CDS Gura_3170 NC_009483.1 3739296 3740279 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(3739296..3740279) Geobacter uraniireducens Rf4 5163123 YP_001231905.1 CDS Gura_3171 NC_009483.1 3740387 3741370 R TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; UDP-glucose 4-epimerase complement(3740387..3741370) Geobacter uraniireducens Rf4 5163124 YP_001231906.1 CDS Gura_3172 NC_009483.1 3741419 3741910 R hypothetical protein complement(3741419..3741910) Geobacter uraniireducens Rf4 5163125 YP_001231907.1 CDS Gura_3173 NC_009483.1 3741900 3742271 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(3741900..3742271) Geobacter uraniireducens Rf4 5166128 YP_001231908.1 CDS Gura_3174 NC_009483.1 3742479 3742709 R TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; AbrB family transcriptional regulator complement(3742479..3742709) Geobacter uraniireducens Rf4 5166129 YP_001231909.1 CDS Gura_3175 NC_009483.1 3743083 3744330 D ATPase AAA 3743083..3744330 Geobacter uraniireducens Rf4 5166130 YP_001231910.1 CDS Gura_3176 NC_009483.1 3744353 3746035 R hypothetical protein complement(3744353..3746035) Geobacter uraniireducens Rf4 5164303 YP_001231911.1 CDS Gura_3177 NC_009483.1 3746100 3747509 R PFAM: sugar transferase; undecaprenyl-phosphate galactose phosphotransferase complement(3746100..3747509) Geobacter uraniireducens Rf4 5164304 YP_001231912.1 CDS Gura_3178 NC_009483.1 3747733 3748689 D hypothetical protein 3747733..3748689 Geobacter uraniireducens Rf4 5164305 YP_001231913.1 CDS Gura_3179 NC_009483.1 3748910 3749854 R hypothetical protein complement(3748910..3749854) Geobacter uraniireducens Rf4 5164998 YP_001231914.1 CDS Gura_3180 NC_009483.1 3749851 3750939 R phosphoglycerol transferase/alkaline phosphatase superfamily protein-like protein complement(3749851..3750939) Geobacter uraniireducens Rf4 5164999 YP_001231915.1 CDS Gura_3181 NC_009483.1 3751031 3752272 D PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 3751031..3752272 Geobacter uraniireducens Rf4 5165000 YP_001231916.1 CDS Gura_3182 NC_009483.1 3752876 3754096 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(3752876..3754096) Geobacter uraniireducens Rf4 5164098 YP_001231917.1 CDS Gura_3183 NC_009483.1 3754156 3755370 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(3754156..3755370) Geobacter uraniireducens Rf4 5164099 YP_001231918.1 CDS Gura_3184 NC_009483.1 3755374 3756663 R hypothetical protein complement(3755374..3756663) Geobacter uraniireducens Rf4 5164100 YP_001231919.1 CDS Gura_3185 NC_009483.1 3756666 3757559 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(3756666..3757559) Geobacter uraniireducens Rf4 5164830 YP_001231920.1 CDS Gura_3186 NC_009483.1 3757552 3758682 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase complement(3757552..3758682) Geobacter uraniireducens Rf4 5164831 YP_001231921.1 CDS Gura_3187 NC_009483.1 3758682 3759290 R PFAM: transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase complement(3758682..3759290) Geobacter uraniireducens Rf4 5164832 YP_001231922.1 CDS Gura_3188 NC_009483.1 3759312 3760211 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(3759312..3760211) Geobacter uraniireducens Rf4 5163617 YP_001231923.1 CDS Gura_3189 NC_009483.1 3760208 3761452 R PFAM: polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(3760208..3761452) Geobacter uraniireducens Rf4 5163618 YP_001231924.1 CDS Gura_3190 NC_009483.1 3761455 3762555 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; glutamine--scyllo-inositol transaminase complement(3761455..3762555) Geobacter uraniireducens Rf4 5163619 YP_001231925.1 CDS Gura_3191 NC_009483.1 3762552 3762968 R PFAM: WxcM domain protein, C-terminal domain protein; WxcM domain-containing protein complement(3762552..3762968) Geobacter uraniireducens Rf4 5165588 YP_001231926.1 CDS Gura_3192 NC_009483.1 3762971 3763702 R PFAM: Methyltransferase type 12; type 12 methyltransferase complement(3762971..3763702) Geobacter uraniireducens Rf4 5165589 YP_001231927.1 CDS Gura_3193 NC_009483.1 3763699 3764115 R hypothetical protein complement(3763699..3764115) Geobacter uraniireducens Rf4 5165590 YP_001231928.1 CDS Gura_3194 NC_009483.1 3764126 3764710 R hypothetical protein complement(3764126..3764710) Geobacter uraniireducens Rf4 5165982 YP_001231929.1 CDS Gura_3195 NC_009483.1 3764700 3764942 R hypothetical protein complement(3764700..3764942) Geobacter uraniireducens Rf4 5165983 YP_001231930.1 CDS Gura_3196 NC_009483.1 3764952 3766637 R TIGRFAM: HAD-superfamily phosphatase, subfamily IIIC; FkbH like protein; FkbH-like protein complement(3764952..3766637) Geobacter uraniireducens Rf4 5165984 YP_001231931.1 CDS Gura_3197 NC_009483.1 3766766 3767038 R hypothetical protein complement(3766766..3767038) Geobacter uraniireducens Rf4 5163289 YP_001231932.1 CDS Gura_3198 NC_009483.1 3767114 3767401 R hypothetical protein complement(3767114..3767401) Geobacter uraniireducens Rf4 5163290 YP_001231933.1 CDS Gura_3199 NC_009483.1 3767710 3768000 R TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; addiction module antitoxin complement(3767710..3768000) Geobacter uraniireducens Rf4 5163291 YP_001231934.1 CDS Gura_3200 NC_009483.1 3767985 3768173 R hypothetical protein complement(3767985..3768173) Geobacter uraniireducens Rf4 5165285 YP_001231935.1 CDS Gura_3201 NC_009483.1 3768339 3768590 R hypothetical protein complement(3768339..3768590) Geobacter uraniireducens Rf4 5165286 YP_001231936.1 CDS Gura_3202 NC_009483.1 3768814 3769197 R PFAM: protein of unknown function DUF86; hypothetical protein complement(3768814..3769197) Geobacter uraniireducens Rf4 5165287 YP_001231937.1 CDS Gura_3203 NC_009483.1 3769181 3769477 R PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(3769181..3769477) Geobacter uraniireducens Rf4 5165274 YP_001231938.1 CDS Gura_3204 NC_009483.1 3769494 3769742 R hypothetical protein complement(3769494..3769742) Geobacter uraniireducens Rf4 5165275 YP_001231939.1 CDS Gura_3205 NC_009483.1 3769880 3770290 R hypothetical protein complement(3769880..3770290) Geobacter uraniireducens Rf4 5165276 YP_001231940.1 CDS Gura_3206 NC_009483.1 3770349 3770651 R hypothetical protein complement(3770349..3770651) Geobacter uraniireducens Rf4 5165709 YP_001231941.1 CDS Gura_3207 NC_009483.1 3770648 3770863 R hypothetical protein complement(3770648..3770863) Geobacter uraniireducens Rf4 5165710 YP_001231942.1 CDS Gura_3208 NC_009483.1 3770952 3771284 R hypothetical protein complement(3770952..3771284) Geobacter uraniireducens Rf4 5165711 YP_001231943.1 CDS Gura_3209 NC_009483.1 3771366 3772409 R PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase complement(3771366..3772409) Geobacter uraniireducens Rf4 5166115 YP_001231944.1 CDS Gura_3210 NC_009483.1 3772495 3773544 R TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; GDP-mannose 4,6-dehydratase complement(3772495..3773544) Geobacter uraniireducens Rf4 5166116 YP_001231945.1 CDS Gura_3211 NC_009483.1 3773662 3775134 R TIGRFAM: cytidyltransferase-related domain; rfaE bifunctional protein; PFAM: cytidylyltransferase; PfkB domain protein; rfaE bifunctional protein complement(3773662..3775134) Geobacter uraniireducens Rf4 5166117 YP_001231946.1 CDS Gura_3212 NC_009483.1 3775191 3775565 R PFAM: S23 ribosomal protein; S23 ribosomal protein complement(3775191..3775565) Geobacter uraniireducens Rf4 5167037 YP_001231947.1 CDS Gura_3213 NC_009483.1 3775592 3776542 R hypothetical protein complement(3775592..3776542) Geobacter uraniireducens Rf4 5167038 YP_001231948.1 CDS Gura_3214 NC_009483.1 3776727 3777767 R TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase, family 9; lipopolysaccharide heptosyltransferase I complement(3776727..3777767) Geobacter uraniireducens Rf4 5167039 YP_001231949.1 CDS Gura_3215 NC_009483.1 3777787 3778830 R PFAM: glycosyl transferase, family 9; glycosyl transferase family protein complement(3777787..3778830) Geobacter uraniireducens Rf4 5165186 YP_001231950.1 CDS Gura_3216 NC_009483.1 3778932 3779177 R hypothetical protein complement(3778932..3779177) Geobacter uraniireducens Rf4 5165187 YP_001231951.1 CDS Gura_3217 NC_009483.1 3779364 3780534 R hypothetical protein complement(join(3779364..3780179,3780178..3780534)) Geobacter uraniireducens Rf4 5165188 YP_001231952.1 CDS Gura_3218 NC_009483.1 3780550 3781290 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(3780550..3781290) Geobacter uraniireducens Rf4 5166229 YP_001231953.1 CDS Gura_3219 NC_009483.1 3781361 3782167 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(3781361..3782167) Geobacter uraniireducens Rf4 5166230 YP_001231954.1 CDS Gura_3220 NC_009483.1 3782344 3783438 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(3782344..3783438) Geobacter uraniireducens Rf4 5166231 YP_001231955.1 CDS Gura_3221 NC_009483.1 3783435 3784421 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(3783435..3784421) Geobacter uraniireducens Rf4 5166396 YP_001231956.1 CDS Gura_3222 NC_009483.1 3784478 3785575 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(3784478..3785575) Geobacter uraniireducens Rf4 5166397 YP_001231957.1 CDS Gura_3223 NC_009483.1 3785632 3786612 R ADP-heptose--LPS heptosyltransferase-like protein complement(3785632..3786612) Geobacter uraniireducens Rf4 5166398 YP_001231958.1 CDS Gura_3224 NC_009483.1 3786735 3787556 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(3786735..3787556) Geobacter uraniireducens Rf4 5164827 YP_001231959.1 CDS Gura_3225 NC_009483.1 3787570 3788355 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(3787570..3788355) Geobacter uraniireducens Rf4 5164828 YP_001231960.1 CDS Gura_3226 NC_009483.1 3788339 3789433 R PFAM: glycosyl transferase, family 9; glycosyl transferase family protein complement(3788339..3789433) Geobacter uraniireducens Rf4 5164829 YP_001231961.1 CDS Gura_3227 NC_009483.1 3789447 3789617 R PFAM: protein of unknown function DUF343; hypothetical protein complement(3789447..3789617) Geobacter uraniireducens Rf4 5166253 YP_001231962.1 CDS Gura_3228 NC_009483.1 3789627 3790709 R TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase complement(3789627..3790709) Geobacter uraniireducens Rf4 5166254 YP_001231963.1 CDS Gura_3229 NC_009483.1 3790945 3792348 R PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; 3-deoxy-D-manno-octulosonic-acid transferase complement(3790945..3792348) Geobacter uraniireducens Rf4 5166255 YP_001231964.1 CDS Gura_3230 NC_009483.1 3792355 3793311 R PFAM: lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase complement(3792355..3793311) Geobacter uraniireducens Rf4 5165549 YP_001231965.1 CDS Gura_3231 NC_009483.1 3793308 3795026 R TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA complement(3793308..3795026) Geobacter uraniireducens Rf4 5165550 YP_001231966.1 CDS lpxB NC_009483.1 3795040 3796158 R catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase complement(3795040..3796158) Geobacter uraniireducens Rf4 5165551 YP_001231967.1 CDS Gura_3233 NC_009483.1 3796296 3797072 R TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase complement(3796296..3797072) Geobacter uraniireducens Rf4 5165619 YP_001231968.1 CDS fabZ NC_009483.1 3797088 3797528 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(3797088..3797528) Geobacter uraniireducens Rf4 5165620 YP_001231969.1 CDS lpxD NC_009483.1 3797583 3798629 R adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase complement(3797583..3798629) Geobacter uraniireducens Rf4 5165621 YP_001231970.1 CDS Gura_3236 NC_009483.1 3798740 3799264 R PFAM: outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp complement(3798740..3799264) Geobacter uraniireducens Rf4 5165271 YP_001231971.1 CDS Gura_3237 NC_009483.1 3799285 3801594 R PFAM: surface antigen (D15); surface antigen variable number repeat protein; surface antigen (D15) complement(3799285..3801594) Geobacter uraniireducens Rf4 5165272 YP_001231972.1 CDS Gura_3238 NC_009483.1 3801719 3802390 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3801719..3802390) Geobacter uraniireducens Rf4 5165273 YP_001231973.1 CDS Gura_3239 NC_009483.1 3802383 3803657 R TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; LolC/E family lipoprotein releasing system, transmembrane protein complement(3802383..3803657) Geobacter uraniireducens Rf4 5165858 YP_001231974.1 CDS Gura_3240 NC_009483.1 3803658 3805142 R TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; lysyl-tRNA synthetase complement(3803658..3805142) Geobacter uraniireducens Rf4 5165859 YP_001231975.1 CDS Gura_3241 NC_009483.1 3805344 3807029 D ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 3805344..3807029 Geobacter uraniireducens Rf4 5165860 YP_001231976.1 CDS hisG NC_009483.1 3807310 3808185 R long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase complement(3807310..3808185) Geobacter uraniireducens Rf4 5166751 YP_001231977.1 CDS hisI NC_009483.1 3808237 3808614 R PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase complement(3808237..3808614) Geobacter uraniireducens Rf4 5166752 YP_001231978.1 CDS Gura_3244 NC_009483.1 3808684 3809526 R PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(3808684..3809526) Geobacter uraniireducens Rf4 5166753 YP_001231979.1 CDS Gura_3245 NC_009483.1 3809728 3810543 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(3809728..3810543) Geobacter uraniireducens Rf4 5163212 YP_001231980.1 CDS Gura_3246 NC_009483.1 3810582 3811757 R TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase, class I and II; 8-amino-7-oxononanoate synthase complement(3810582..3811757) Geobacter uraniireducens Rf4 5163213 YP_001231981.1 CDS Gura_3247 NC_009483.1 3811859 3812995 R PFAM: metallophosphoesterase; metallophosphoesterase complement(3811859..3812995) Geobacter uraniireducens Rf4 5163214 YP_001231982.1 CDS Gura_3248 NC_009483.1 3818754 3819005 R hypothetical protein complement(3818754..3819005) Geobacter uraniireducens Rf4 5164318 YP_001231983.1 CDS Gura_3249 NC_009483.1 3819028 3820314 R TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase complement(3819028..3820314) Geobacter uraniireducens Rf4 5164319 YP_001231984.1 CDS Gura_3250 NC_009483.1 3820427 3821926 R amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase complement(3820427..3821926) Geobacter uraniireducens Rf4 5163967 YP_001231985.1 CDS Gura_3251 NC_009483.1 3822112 3822276 D hypothetical protein 3822112..3822276 Geobacter uraniireducens Rf4 5163968 YP_001231986.1 CDS Gura_3252 NC_009483.1 3822270 3824123 R TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH complement(3822270..3824123) Geobacter uraniireducens Rf4 5163969 YP_001231987.1 CDS Gura_3253 NC_009483.1 3824227 3825180 R hypothetical protein complement(3824227..3825180) Geobacter uraniireducens Rf4 5163937 YP_001231988.1 CDS Gura_3254 NC_009483.1 3825419 3826222 D hypothetical protein 3825419..3826222 Geobacter uraniireducens Rf4 5163938 YP_001231989.1 CDS Gura_3255 NC_009483.1 3826534 3827289 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; succinate dehydrogenase/fumarate reductase iron-sulfur subunit complement(3826534..3827289) Geobacter uraniireducens Rf4 5163939 YP_001231990.1 CDS sdhA NC_009483.1 3827289 3829205 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(3827289..3829205) Geobacter uraniireducens Rf4 5166167 YP_001231991.1 CDS Gura_3257 NC_009483.1 3829216 3829875 R TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; succinate dehydrogenase/fumarate reductase cytochrome b subunit complement(3829216..3829875) Geobacter uraniireducens Rf4 5166168 YP_001231992.1 CDS Gura_3258 NC_009483.1 3830318 3831424 D TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 3830318..3831424 Geobacter uraniireducens Rf4 5166169 YP_001231993.1 CDS mazG NC_009483.1 3831472 3832263 D functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 3831472..3832263 Geobacter uraniireducens Rf4 5166407 YP_001231994.1 CDS Gura_3260 NC_009483.1 3832526 3833101 R TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(3832526..3833101) Geobacter uraniireducens Rf4 5166408 YP_001231995.1 CDS Gura_3261 NC_009483.1 3833114 3834682 R TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; integral membrane protein MviN complement(3833114..3834682) Geobacter uraniireducens Rf4 5166409 YP_001231996.1 CDS Gura_3262 NC_009483.1 3834751 3834990 R hypothetical protein complement(3834751..3834990) Geobacter uraniireducens Rf4 5166078 YP_001231997.1 CDS Gura_3265 NC_009483.1 3836168 3837337 R PFAM: class II aldolase/adducin family protein; class II aldolase/adducin family protein complement(3836168..3837337) Geobacter uraniireducens Rf4 5166080 YP_001231998.1 CDS Gura_3266 NC_009483.1 3837468 3838535 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase complement(3837468..3838535) Geobacter uraniireducens Rf4 5164393 YP_001231999.1 CDS Gura_3267 NC_009483.1 3838678 3838953 R hypothetical protein complement(3838678..3838953) Geobacter uraniireducens Rf4 5164394 YP_001232000.1 CDS Gura_3268 NC_009483.1 3838957 3839220 R hypothetical protein complement(3838957..3839220) Geobacter uraniireducens Rf4 5164395 YP_001232001.1 CDS Gura_3269 NC_009483.1 3839354 3841093 R PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase-like; aldehyde ferredoxin oxidoreductase complement(3839354..3841093) Geobacter uraniireducens Rf4 5163773 YP_001232002.1 CDS Gura_3270 NC_009483.1 3841179 3842255 R PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; nucleotidyl transferase complement(3841179..3842255) Geobacter uraniireducens Rf4 5163774 YP_001232003.1 CDS Gura_3271 NC_009483.1 3842341 3842706 R PFAM: mannose-6-phosphate isomerase, type II; Cupin 2, conserved barrel domain protein; mannose-6-phosphate isomerase complement(3842341..3842706) Geobacter uraniireducens Rf4 5163775 YP_001232004.1 CDS Gura_3272 NC_009483.1 3842706 3843536 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(3842706..3843536) Geobacter uraniireducens Rf4 5166146 YP_001232005.1 CDS Gura_3273 NC_009483.1 3843536 3844609 R TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; dTDP-glucose 4,6-dehydratase complement(3843536..3844609) Geobacter uraniireducens Rf4 5166147 YP_001232006.1 CDS Gura_3274 NC_009483.1 3844648 3846123 R hypothetical protein complement(3844648..3846123) Geobacter uraniireducens Rf4 5166148 YP_001232007.1 CDS Gura_3275 NC_009483.1 3846137 3847927 R adenine-specific DNA methylase complement(3846137..3847927) Geobacter uraniireducens Rf4 5163721 YP_001232008.1 CDS Gura_3276 NC_009483.1 3847961 3850093 R PFAM: OstA family protein; Organic solvent tolerance protein; organic solvent tolerance protein complement(3847961..3850093) Geobacter uraniireducens Rf4 5163722 YP_001232009.1 CDS Gura_3277 NC_009483.1 3850093 3851367 R TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(3850093..3851367) Geobacter uraniireducens Rf4 5163723 YP_001232010.1 CDS Gura_3278 NC_009483.1 3851435 3851659 R hypothetical protein complement(3851435..3851659) Geobacter uraniireducens Rf4 5163286 YP_001232011.1 CDS Gura_3279 NC_009483.1 3851830 3852678 R TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta complement(3851830..3852678) Geobacter uraniireducens Rf4 5163287 YP_001232012.1 CDS trpA NC_009483.1 3852832 3853635 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(3852832..3853635) Geobacter uraniireducens Rf4 5163288 YP_001232013.1 CDS Gura_3281 NC_009483.1 3853661 3855871 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3853661..3855871) Geobacter uraniireducens Rf4 5164271 YP_001232014.1 CDS Gura_3282 NC_009483.1 3855948 3856307 R hypothetical protein complement(3855948..3856307) Geobacter uraniireducens Rf4 5164272 YP_001232015.1 CDS Gura_3283 NC_009483.1 3856342 3857694 R hypothetical protein complement(3856342..3857694) Geobacter uraniireducens Rf4 5164273 YP_001232016.1 CDS Gura_3284 NC_009483.1 3857969 3859750 D hypothetical protein 3857969..3859750 Geobacter uraniireducens Rf4 5165961 YP_001232017.1 CDS Gura_3285 NC_009483.1 3859834 3861744 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3859834..3861744) Geobacter uraniireducens Rf4 5165962 YP_001232018.1 CDS Gura_3286 NC_009483.1 3861741 3862238 R SMART: Water Stress and Hypersensitive response; water stress/hypersensitive response protein complement(3861741..3862238) Geobacter uraniireducens Rf4 5165963 YP_001232019.1 CDS Gura_3287 NC_009483.1 3862352 3862999 R hypothetical protein complement(3862352..3862999) Geobacter uraniireducens Rf4 5163006 YP_001232020.1 CDS Gura_3288 NC_009483.1 3863379 3864572 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(3863379..3864572) Geobacter uraniireducens Rf4 5163007 YP_001232021.1 CDS Gura_3289 NC_009483.1 3864774 3867872 R PFAM: acriflavin resistance protein; acriflavin resistance protein complement(3864774..3867872) Geobacter uraniireducens Rf4 5163008 YP_001232022.1 CDS Gura_3292 NC_009483.1 3870676 3871353 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 3870676..3871353 Geobacter uraniireducens Rf4 5167074 YP_001232023.1 CDS Gura_3293 NC_009483.1 3871411 3871893 D PFAM: tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 3871411..3871893 Geobacter uraniireducens Rf4 5166331 YP_001232024.1 CDS Gura_3294 NC_009483.1 3871931 3872308 D hypothetical protein 3871931..3872308 Geobacter uraniireducens Rf4 5166332 YP_001232025.1 CDS Gura_3295 NC_009483.1 3872390 3873346 R PFAM: import inner membrane translocase, subunit Tim44; import inner membrane translocase subunit Tim44 complement(3872390..3873346) Geobacter uraniireducens Rf4 5166333 YP_001232026.1 CDS Gura_3296 NC_009483.1 3873412 3873642 R hypothetical protein complement(3873412..3873642) Geobacter uraniireducens Rf4 5165097 YP_001232027.1 CDS Gura_3297 NC_009483.1 3874004 3874801 R PFAM: metal-dependent phosphohydrolase, HD sub domain; metal-dependent phosphohydrolase complement(3874004..3874801) Geobacter uraniireducens Rf4 5165098 YP_001232028.1 CDS Gura_3298 NC_009483.1 3874964 3875338 R PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(3874964..3875338) Geobacter uraniireducens Rf4 5165099 YP_001232029.1 CDS Gura_3299 NC_009483.1 3875507 3876790 R fructose/tagatose bisphosphate aldolase-like protein complement(3875507..3876790) Geobacter uraniireducens Rf4 5165598 YP_001232030.1 CDS Gura_3300 NC_009483.1 3876977 3879682 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; P-type HAD superfamily ATPase complement(3876977..3879682) Geobacter uraniireducens Rf4 5165599 YP_001232031.1 CDS Gura_3301 NC_009483.1 3879831 3880892 D catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 3879831..3880892 Geobacter uraniireducens Rf4 5165600 YP_001232032.1 CDS Gura_3302 NC_009483.1 3880909 3881730 R hypothetical protein complement(3880909..3881730) Geobacter uraniireducens Rf4 5166856 YP_001232033.1 CDS Gura_3303 NC_009483.1 3881771 3882688 R hypothetical protein complement(3881771..3882688) Geobacter uraniireducens Rf4 5166857 YP_001232034.1 CDS Gura_3304 NC_009483.1 3883260 3884141 R hypothetical protein complement(3883260..3884141) Geobacter uraniireducens Rf4 5166858 YP_001232035.1 CDS Gura_3305 NC_009483.1 3884285 3886099 R hypothetical protein complement(3884285..3886099) Geobacter uraniireducens Rf4 5166787 YP_001232036.1 CDS Gura_3306 NC_009483.1 3886486 3886926 R hypothetical protein complement(3886486..3886926) Geobacter uraniireducens Rf4 5166788 YP_001232037.1 CDS Gura_3307 NC_009483.1 3886965 3887831 R PFAM: NUDIX hydrolase; NUDIX hydrolase complement(3886965..3887831) Geobacter uraniireducens Rf4 5166789 YP_001232038.1 CDS Gura_3308 NC_009483.1 3888102 3889913 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; Cache, type 2 domain protein; diguanylate cyclase complement(3888102..3889913) Geobacter uraniireducens Rf4 5162754 YP_001232039.1 CDS Gura_3309 NC_009483.1 3890110 3890469 D PFAM: regulatory protein, ArsR; regulatory protein ArsR 3890110..3890469 Geobacter uraniireducens Rf4 5162755 YP_001232040.1 CDS Gura_3310 NC_009483.1 3890559 3891137 D PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase 3890559..3891137 Geobacter uraniireducens Rf4 5162756 YP_001232041.1 CDS Gura_3311 NC_009483.1 3891550 3893193 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3891550..3893193) Geobacter uraniireducens Rf4 5163709 YP_001232042.1 CDS Gura_3312 NC_009483.1 3893379 3894341 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase complement(3893379..3894341) Geobacter uraniireducens Rf4 5163710 YP_001232043.1 CDS Gura_3313 NC_009483.1 3894379 3895533 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; acyl-CoA dehydrogenase domain-containing protein complement(3894379..3895533) Geobacter uraniireducens Rf4 5163711 YP_001232044.1 CDS Gura_3314 NC_009483.1 3895824 3897314 D PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase 3895824..3897314 Geobacter uraniireducens Rf4 5166769 YP_001232045.1 CDS Gura_3315 NC_009483.1 3897450 3898229 R PFAM: protein phosphatase 2C domain protein; protein phosphatase 2C domain-containing protein complement(3897450..3898229) Geobacter uraniireducens Rf4 5166770 YP_001232046.1 CDS Gura_3316 NC_009483.1 3898610 3900688 D PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Ig family protein; peptidase S8/S53 subtilisin kexin sedolisin 3898610..3900688 Geobacter uraniireducens Rf4 5166771 YP_001232047.1 CDS Gura_3317 NC_009483.1 3900977 3901510 D hypothetical protein 3900977..3901510 Geobacter uraniireducens Rf4 5162766 YP_001232048.1 CDS Gura_3318 NC_009483.1 3901507 3902532 D PFAM: Integrase, catalytic region; integrase catalytic subunit 3901507..3902532 Geobacter uraniireducens Rf4 5162767 YP_001232049.1 CDS Gura_3319 NC_009483.1 3903160 3903552 R PFAM: FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein complement(3903160..3903552) Geobacter uraniireducens Rf4 5162768 YP_001232050.1 CDS Gura_3320 NC_009483.1 3903567 3904109 R PFAM: carbonic anhydrase; carbonic anhydrase complement(3903567..3904109) Geobacter uraniireducens Rf4 5163652 YP_001232051.1 CDS Gura_3321 NC_009483.1 3904420 3905475 R TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; molybdate ABC transporter ATPase complement(3904420..3905475) Geobacter uraniireducens Rf4 5163653 YP_001232052.1 CDS Gura_3322 NC_009483.1 3905477 3906160 R TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; molybdate ABC transporter inner membrane protein complement(3905477..3906160) Geobacter uraniireducens Rf4 5163654 YP_001232053.1 CDS Gura_3323 NC_009483.1 3906414 3907163 R TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; molybdenum ABC transporter periplasmic molybdate-binding protein complement(3906414..3907163) Geobacter uraniireducens Rf4 5163253 YP_001232054.1 CDS Gura_3324 NC_009483.1 3907462 3907887 R PFAM: TOBE domain protein; TOBE domain-containing protein complement(3907462..3907887) Geobacter uraniireducens Rf4 5163254 YP_001232055.1 CDS Gura_3325 NC_009483.1 3908256 3908684 D PFAM: peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 3908256..3908684 Geobacter uraniireducens Rf4 5163255 YP_001232056.1 CDS Gura_3326 NC_009483.1 3908752 3909789 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3908752..3909789) Geobacter uraniireducens Rf4 5165673 YP_001232057.1 CDS Gura_3327 NC_009483.1 3909798 3910481 R PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis protein, P47K complement(3909798..3910481) Geobacter uraniireducens Rf4 5165674 YP_001232058.1 CDS Gura_3328 NC_009483.1 3910478 3911695 R Fe3+ ABC transporter periplasmic component-like protein complement(3910478..3911695) Geobacter uraniireducens Rf4 5165675 YP_001232059.1 CDS Gura_3329 NC_009483.1 3911884 3913173 R PFAM: phosphate-selective porin O and P; phosphate-selective porin O and P complement(3911884..3913173) Geobacter uraniireducens Rf4 5162897 YP_001232060.1 CDS Gura_3330 NC_009483.1 3913319 3915670 D hypothetical protein 3913319..3915670 Geobacter uraniireducens Rf4 5162898 YP_001232061.1 CDS Gura_3331 NC_009483.1 3915743 3916453 R TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; protein-L-isoaspartate O-methyltransferase complement(3915743..3916453) Geobacter uraniireducens Rf4 5162899 YP_001232062.1 CDS Gura_3332 NC_009483.1 3916697 3917410 D hypothetical protein 3916697..3917410 Geobacter uraniireducens Rf4 5166738 YP_001232063.1 CDS Gura_3333 NC_009483.1 3917397 3918410 R PFAM: regulatory protein, LuxR; GAF domain protein; putative GAF sensor protein complement(3917397..3918410) Geobacter uraniireducens Rf4 5166739 YP_001232064.1 CDS Gura_3334 NC_009483.1 3918757 3920544 D hypothetical protein 3918757..3920544 Geobacter uraniireducens Rf4 5166740 YP_001232065.1 CDS Gura_3335 NC_009483.1 3921181 3922557 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator complement(3921181..3922557) Geobacter uraniireducens Rf4 5164277 YP_001232066.1 CDS Gura_3336 NC_009483.1 3923074 3924039 D PFAM: Auxin Efflux Carrier; auxin efflux carrier 3923074..3924039 Geobacter uraniireducens Rf4 5164278 YP_001232067.1 CDS Gura_3337 NC_009483.1 3924097 3924594 R hypothetical protein complement(3924097..3924594) Geobacter uraniireducens Rf4 5164279 YP_001232068.1 CDS Gura_3338 NC_009483.1 3924695 3925096 R PFAM: DoxX family protein; DoxX family protein complement(3924695..3925096) Geobacter uraniireducens Rf4 5164948 YP_001232069.1 CDS Gura_3339 NC_009483.1 3925354 3925953 R hypothetical protein complement(3925354..3925953) Geobacter uraniireducens Rf4 5164949 YP_001232070.1 CDS Gura_3340 NC_009483.1 3925925 3926740 R PFAM: Cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase complement(3925925..3926740) Geobacter uraniireducens Rf4 5164950 YP_001232071.1 CDS Gura_3341 NC_009483.1 3926786 3927367 R hypothetical protein complement(3926786..3927367) Geobacter uraniireducens Rf4 5164789 YP_001232072.1 CDS Gura_3342 NC_009483.1 3927386 3927901 R hypothetical protein complement(3927386..3927901) Geobacter uraniireducens Rf4 5164790 YP_001232073.1 CDS Gura_3343 NC_009483.1 3927992 3928783 R PFAM: Roadblock/LC7 family protein; roadblock/LC7 family protein complement(3927992..3928783) Geobacter uraniireducens Rf4 5164791 YP_001232074.1 CDS Gura_3344 NC_009483.1 3928832 3930226 R PFAM: domain of unknown function DUF1745; hypothetical protein complement(3928832..3930226) Geobacter uraniireducens Rf4 5164341 YP_001232075.1 CDS Gura_3345 NC_009483.1 3931121 3931459 R hypothetical protein complement(3931121..3931459) Geobacter uraniireducens Rf4 5164342 YP_001232076.1 CDS Gura_3346 NC_009483.1 3931720 3932049 R hypothetical protein complement(3931720..3932049) Geobacter uraniireducens Rf4 5164343 YP_001232077.1 CDS Gura_3347 NC_009483.1 3932077 3932886 R PFAM: protein of unknown function DUF547; hypothetical protein complement(3932077..3932886) Geobacter uraniireducens Rf4 5163147 YP_001232078.1 CDS Gura_3348 NC_009483.1 3932920 3933621 R hypothetical protein complement(3932920..3933621) Geobacter uraniireducens Rf4 5163148 YP_001232079.1 CDS Gura_3349 NC_009483.1 3933687 3934163 R hypothetical protein complement(3933687..3934163) Geobacter uraniireducens Rf4 5163149 YP_001232080.1 CDS Gura_3350 NC_009483.1 3934236 3934709 R hypothetical protein complement(3934236..3934709) Geobacter uraniireducens Rf4 5166835 YP_001232081.1 CDS Gura_3351 NC_009483.1 3935033 3935869 R PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; stage II sporulation E family protein complement(3935033..3935869) Geobacter uraniireducens Rf4 5166836 YP_001232082.1 CDS Gura_3352 NC_009483.1 3935926 3936456 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; peroxidase-like protein complement(3935926..3936456) Geobacter uraniireducens Rf4 5166837 YP_001232083.1 CDS Gura_3353 NC_009483.1 3936502 3937089 R PFAM: regulatory protein, TetR; TetR family transcriptional regulator complement(3936502..3937089) Geobacter uraniireducens Rf4 5165576 YP_001232084.1 CDS Gura_3354 NC_009483.1 3937517 3938707 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(3937517..3938707) Geobacter uraniireducens Rf4 5165577 YP_001232085.1 CDS Gura_3355 NC_009483.1 3938721 3939542 R PFAM: inositol monophosphatase; inositol-phosphate phosphatase complement(3938721..3939542) Geobacter uraniireducens Rf4 5165578 YP_001232086.1 CDS Gura_3356 NC_009483.1 3939777 3940205 R hypothetical protein complement(3939777..3940205) Geobacter uraniireducens Rf4 5162784 YP_001232087.1 CDS Gura_3357 NC_009483.1 3940202 3940780 R hypothetical protein complement(3940202..3940780) Geobacter uraniireducens Rf4 5162785 YP_001232088.1 CDS Gura_3358 NC_009483.1 3940777 3941169 R hypothetical protein complement(3940777..3941169) Geobacter uraniireducens Rf4 5162786 YP_001232089.1 CDS Gura_3359 NC_009483.1 3941549 3942151 R hypothetical protein complement(3941549..3942151) Geobacter uraniireducens Rf4 5165543 YP_001232090.1 CDS Gura_3360 NC_009483.1 3942259 3945357 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux protein complement(3942259..3945357) Geobacter uraniireducens Rf4 5165544 YP_001232091.1 CDS Gura_3361 NC_009483.1 3945517 3946749 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(3945517..3946749) Geobacter uraniireducens Rf4 5165545 YP_001232092.1 CDS Gura_3362 NC_009483.1 3946746 3948041 R PFAM: outer membrane efflux protein; outer membrane efflux protein complement(3946746..3948041) Geobacter uraniireducens Rf4 5163649 YP_001232093.1 CDS Gura_3363 NC_009483.1 3948341 3948706 R hypothetical protein complement(3948341..3948706) Geobacter uraniireducens Rf4 5163650 YP_001232094.1 CDS Gura_3364 NC_009483.1 3948830 3949579 R PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; histidine kinase complement(3948830..3949579) Geobacter uraniireducens Rf4 5163651 YP_001232095.1 CDS Gura_3365 NC_009483.1 3949819 3951276 R TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; ammonium transporter complement(3949819..3951276) Geobacter uraniireducens Rf4 5163602 YP_001232096.1 CDS Gura_3366 NC_009483.1 3951310 3951648 R PFAM: nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(3951310..3951648) Geobacter uraniireducens Rf4 5163603 YP_001232097.1 CDS Gura_3367 NC_009483.1 3951742 3952560 R hypothetical protein complement(3951742..3952560) Geobacter uraniireducens Rf4 5163604 YP_001232098.1 CDS aksA NC_009483.1 3953170 3954321 R in Methanococcus jannaschii this protein catalyzes the condensation of alpha-ketoglutarate and acetyl-CoA to form trans-homoaconitate; functions in alphaketosuberate synthesis which is a precursor in coenzyme B and biotin synthesis; trans-homoaconitate synthase complement(3953170..3954321) Geobacter uraniireducens Rf4 5166358 YP_001232099.1 CDS Gura_3369 NC_009483.1 3954647 3955807 D PFAM: Na+/H+ antiporter NhaA; Na+/H+ antiporter NhaA 3954647..3955807 Geobacter uraniireducens Rf4 5166359 YP_001232100.1 CDS Gura_3370 NC_009483.1 3955802 3957265 R TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase, subunit FdhD; formate dehydrogenase family accessory protein FdhD complement(3955802..3957265) Geobacter uraniireducens Rf4 5166360 YP_001232101.1 CDS Gura_3371 NC_009483.1 3957497 3958342 R hypothetical protein complement(3957497..3958342) Geobacter uraniireducens Rf4 5162982 YP_001232102.1 CDS Gura_3372 NC_009483.1 3958342 3958974 R TIGRFAM: formate dehydrogenase, gamma subunit; formate dehydrogenase subunit gamma complement(3958342..3958974) Geobacter uraniireducens Rf4 5162983 YP_001232103.1 CDS Gura_3373 NC_009483.1 3958967 3959743 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(3958967..3959743) Geobacter uraniireducens Rf4 5162984 YP_001232104.1 CDS Gura_3374 NC_009483.1 3959750 3962935 R TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; Contains selenocysteine; formate dehydrogenase subunit alpha complement(3959750..3962935) Geobacter uraniireducens Rf4 5165386 YP_001232105.1 CDS Gura_3375 NC_009483.1 3963375 3964760 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 3963375..3964760 Geobacter uraniireducens Rf4 5165387 YP_001232106.1 CDS Gura_3376 NC_009483.1 3964773 3966848 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 3964773..3966848 Geobacter uraniireducens Rf4 5165388 YP_001232107.1 CDS Gura_3377 NC_009483.1 3966918 3969245 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase complement(3966918..3969245) Geobacter uraniireducens Rf4 5163732 YP_001232108.1 CDS Gura_3378 NC_009483.1 3969507 3969836 R PFAM: PemK family protein; transcriptional modulator of MazE/toxin MazF complement(3969507..3969836) Geobacter uraniireducens Rf4 5163733 YP_001232109.1 CDS Gura_3379 NC_009483.1 3969824 3970078 R PFAM: SpoVT/AbrB domain protein; transcriptional regulator/antitoxin MazE complement(3969824..3970078) Geobacter uraniireducens Rf4 5163734 YP_001232110.1 CDS Gura_3381 NC_009483.1 3970901 3971683 R hypothetical protein complement(3970901..3971683) Geobacter uraniireducens Rf4 5163321 YP_001232111.1 CDS Gura_3382 NC_009483.1 3971680 3972966 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(3971680..3972966) Geobacter uraniireducens Rf4 5163322 YP_001232112.1 CDS Gura_3383 NC_009483.1 3973085 3973663 R PFAM: protein of unknown function DUF820; hypothetical protein complement(3973085..3973663) Geobacter uraniireducens Rf4 5165309 YP_001232113.1 CDS tatA NC_009483.1 3973806 3973976 R TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A complement(3973806..3973976) Geobacter uraniireducens Rf4 5165310 YP_001232114.1 CDS Gura_3385 NC_009483.1 3974411 3975862 R TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase, subunit FdhD; formate dehydrogenase family accessory protein FdhD complement(3974411..3975862) Geobacter uraniireducens Rf4 5165311 YP_001232115.1 CDS Gura_3386 NC_009483.1 3976046 3977257 R PFAM: Polysulphide reductase, NrfD; polysulfide reductase NrfD complement(3976046..3977257) Geobacter uraniireducens Rf4 5166781 YP_001232116.1 CDS Gura_3387 NC_009483.1 3977254 3978099 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(3977254..3978099) Geobacter uraniireducens Rf4 5166782 YP_001232117.1 CDS Gura_3388 NC_009483.1 3978096 3981128 R TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; Contains selenocysteine; formate dehydrogenase subunit alpha complement(3978096..3981128) Geobacter uraniireducens Rf4 5166783 YP_001232118.1 CDS Gura_3389 NC_009483.1 3981541 3982929 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 3981541..3982929 Geobacter uraniireducens Rf4 5164320 YP_001232119.1 CDS Gura_3390 NC_009483.1 3982929 3984944 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 3982929..3984944 Geobacter uraniireducens Rf4 5164321 YP_001232120.1 CDS Gura_3391 NC_009483.1 3985074 3986441 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 3985074..3986441 Geobacter uraniireducens Rf4 5164322 YP_001232121.1 CDS Gura_3392 NC_009483.1 3986446 3988434 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 3986446..3988434 Geobacter uraniireducens Rf4 5165643 YP_001232122.1 CDS Gura_3393 NC_009483.1 3988635 3989849 D TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; molybdenum cofactor synthesis domain-containing protein 3988635..3989849 Geobacter uraniireducens Rf4 5165644 YP_001232123.1 CDS Gura_3394 NC_009483.1 3990334 3992328 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; methyl-accepting chemotaxis sensory transducer 3990334..3992328 Geobacter uraniireducens Rf4 5165645 YP_001232124.1 CDS Gura_3395 NC_009483.1 3992460 3993461 D TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; phosphate acetyltransferase 3992460..3993461 Geobacter uraniireducens Rf4 5164732 YP_001232125.1 CDS Gura_3396 NC_009483.1 3993620 3994885 R AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase complement(3993620..3994885) Geobacter uraniireducens Rf4 5164733 YP_001232126.1 CDS Gura_3397 NC_009483.1 3995708 3997390 R TIGRFAM: MJ0042 family finger-like protein; Zinc finger-domain-containing protein complement(3995708..3997390) Geobacter uraniireducens Rf4 5164734 YP_001232127.1 CDS Gura_3398 NC_009483.1 3997410 3997922 R TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase complement(3997410..3997922) Geobacter uraniireducens Rf4 5164465 YP_001232128.1 CDS Gura_3399 NC_009483.1 3998083 3998772 D PFAM: protein of unknown function DUF1573; hypothetical protein 3998083..3998772 Geobacter uraniireducens Rf4 5164466 YP_001232129.1 CDS Gura_3400 NC_009483.1 3998803 3999681 R PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein complement(3998803..3999681) Geobacter uraniireducens Rf4 5164467 YP_001232130.1 CDS Gura_3401 NC_009483.1 4000046 4000456 D hypothetical protein 4000046..4000456 Geobacter uraniireducens Rf4 5165149 YP_001232131.1 CDS Gura_3402 NC_009483.1 4000834 4001655 R PFAM: BRO domain protein; prophage antirepressor complement(4000834..4001655) Geobacter uraniireducens Rf4 5166137 YP_001232132.1 CDS Gura_3403 NC_009483.1 4001734 4002705 R transcriptional regulator-like protein complement(4001734..4002705) Geobacter uraniireducens Rf4 5166138 YP_001232133.1 CDS Gura_3404 NC_009483.1 4003338 4004018 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(4003338..4004018) Geobacter uraniireducens Rf4 5166139 YP_001232134.1 CDS Gura_3405 NC_009483.1 4004015 4004629 R PFAM: Methyltransferase type 11; type 11 methyltransferase complement(4004015..4004629) Geobacter uraniireducens Rf4 5165013 YP_001232135.1 CDS Gura_3406 NC_009483.1 4004616 4005338 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4004616..4005338) Geobacter uraniireducens Rf4 5165014 YP_001232136.1 CDS Gura_3407 NC_009483.1 4005341 4006543 R PFAM: protein of unknown function DUF214; hypothetical protein complement(4005341..4006543) Geobacter uraniireducens Rf4 5165015 YP_001232137.1 CDS Gura_3408 NC_009483.1 4006540 4007709 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(4006540..4007709) Geobacter uraniireducens Rf4 5166878 YP_001232138.1 CDS Gura_3409 NC_009483.1 4007734 4008993 R PFAM: outer membrane efflux protein; outer membrane efflux protein complement(4007734..4008993) Geobacter uraniireducens Rf4 5166879 YP_001232139.1 CDS Gura_3410 NC_009483.1 4009062 4009652 R PFAM: regulatory protein, TetR; TetR family transcriptional regulator complement(4009062..4009652) Geobacter uraniireducens Rf4 5166880 YP_001232140.1 CDS Gura_3411 NC_009483.1 4009925 4010242 D hypothetical protein 4009925..4010242 Geobacter uraniireducens Rf4 5166687 YP_001232141.1 CDS Gura_3412 NC_009483.1 4010378 4010932 D PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; OB-fold tRNA/helicase-type nucleic acid binding protein 4010378..4010932 Geobacter uraniireducens Rf4 5166688 YP_001232142.1 CDS Gura_3413 NC_009483.1 4010989 4011846 D hypothetical protein 4010989..4011846 Geobacter uraniireducens Rf4 5166689 YP_001232143.1 CDS Gura_3414 NC_009483.1 4011855 4013075 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 4011855..4013075 Geobacter uraniireducens Rf4 5165745 YP_001232144.1 CDS Gura_3415 NC_009483.1 4013095 4014456 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 4013095..4014456 Geobacter uraniireducens Rf4 5165746 YP_001232145.1 CDS Gura_3416 NC_009483.1 4014766 4015416 D Co/Zn/Cd cation transporter-like protein 4014766..4015416 Geobacter uraniireducens Rf4 5165747 YP_001232146.1 CDS Gura_3417 NC_009483.1 4015777 4018596 R TIGRFAM: cytochrome C family protein; cytochrome C family protein complement(4015777..4018596) Geobacter uraniireducens Rf4 5167048 YP_001232147.1 CDS Gura_3418 NC_009483.1 4018593 4018997 R hypothetical protein complement(4018593..4018997) Geobacter uraniireducens Rf4 5167049 YP_001232148.1 CDS Gura_3419 NC_009483.1 4019538 4020605 R TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA family protein; magnesium and cobalt transport protein CorA complement(4019538..4020605) Geobacter uraniireducens Rf4 5167050 YP_001232149.1 CDS Gura_3420 NC_009483.1 4020628 4020927 R PFAM: plasmid stabilization system; plasmid stabilization system protein complement(4020628..4020927) Geobacter uraniireducens Rf4 5166730 YP_001232150.1 CDS Gura_3421 NC_009483.1 4020932 4021207 R TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; prevent-host-death family protein complement(4020932..4021207) Geobacter uraniireducens Rf4 5166731 YP_001232151.1 CDS Gura_3422 NC_009483.1 4021295 4022971 R hypothetical protein complement(4021295..4022971) Geobacter uraniireducens Rf4 5166732 YP_001232152.1 CDS Gura_3423 NC_009483.1 4023059 4023349 R hypothetical protein complement(4023059..4023349) Geobacter uraniireducens Rf4 5166587 YP_001232153.1 CDS Gura_3424 NC_009483.1 4023535 4023939 R PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; conserved hypothetical protein 156; hypothetical protein complement(4023535..4023939) Geobacter uraniireducens Rf4 5166588 YP_001232154.1 CDS Gura_3425 NC_009483.1 4024098 4025156 R PFAM: glycosyl hydrolase, BNR repeat-containing protein; BNR repeat-containing glycosyl hydrolase complement(4024098..4025156) Geobacter uraniireducens Rf4 5166589 YP_001232155.1 CDS Gura_3426 NC_009483.1 4025203 4027908 R TIGRFAM: cytochrome C family protein; cytochrome C family protein complement(4025203..4027908) Geobacter uraniireducens Rf4 5165769 YP_001232156.1 CDS Gura_3427 NC_009483.1 4027986 4032359 R TIGRFAM: cytochrome C family protein; cytochrome C family protein complement(4027986..4032359) Geobacter uraniireducens Rf4 5165770 YP_001232157.1 CDS Gura_3428 NC_009483.1 4032447 4035500 R TIGRFAM: cytochrome C family protein; cytochrome C family protein complement(4032447..4035500) Geobacter uraniireducens Rf4 5165771 YP_001232158.1 CDS Gura_3429 NC_009483.1 4035715 4036908 R hypothetical protein complement(4035715..4036908) Geobacter uraniireducens Rf4 5167063 YP_001232159.1 CDS Gura_3430 NC_009483.1 4037102 4039843 R hypothetical protein complement(4037102..4039843) Geobacter uraniireducens Rf4 5167064 YP_001232160.1 CDS Gura_3431 NC_009483.1 4040348 4041022 D PFAM: surface antigen msp4 family protein; surface antigen msp4 family protein 4040348..4041022 Geobacter uraniireducens Rf4 5167065 YP_001232161.1 CDS Gura_3432 NC_009483.1 4041716 4042033 D hypothetical protein 4041716..4042033 Geobacter uraniireducens Rf4 5162619 YP_001232162.1 CDS Gura_3433 NC_009483.1 4042272 4042955 R hypothetical protein complement(4042272..4042955) Geobacter uraniireducens Rf4 5162620 YP_001232163.1 CDS Gura_3434 NC_009483.1 4043269 4043625 R hypothetical protein complement(4043269..4043625) Geobacter uraniireducens Rf4 5162621 YP_001232164.1 CDS Gura_3435 NC_009483.1 4044166 4044516 D PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 4044166..4044516 Geobacter uraniireducens Rf4 5162948 YP_001232165.1 CDS Gura_3436 NC_009483.1 4045124 4045582 D PFAM: protein of unknown function DUF107; hypothetical protein 4045124..4045582 Geobacter uraniireducens Rf4 5163241 YP_001232166.1 CDS Gura_3437 NC_009483.1 4045582 4046433 D PFAM: band 7 protein; hypothetical protein 4045582..4046433 Geobacter uraniireducens Rf4 5163242 YP_001232167.1 CDS Gura_3438 NC_009483.1 4046898 4047383 R hypothetical protein complement(4046898..4047383) Geobacter uraniireducens Rf4 5163243 YP_001232168.1 CDS Gura_3439 NC_009483.1 4047938 4048546 D hypothetical protein 4047938..4048546 Geobacter uraniireducens Rf4 5163197 YP_001232169.1 CDS Gura_3440 NC_009483.1 4048821 4049252 R PFAM: peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase complement(4048821..4049252) Geobacter uraniireducens Rf4 5163198 YP_001232170.1 CDS Gura_3441 NC_009483.1 4049469 4050512 R beta-lactamase class A-like protein complement(4049469..4050512) Geobacter uraniireducens Rf4 5163199 YP_001232171.1 CDS Gura_3442 NC_009483.1 4051298 4051744 R hypothetical protein complement(4051298..4051744) Geobacter uraniireducens Rf4 5162837 YP_001232172.1 CDS Gura_3443 NC_009483.1 4051769 4052143 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(4051769..4052143) Geobacter uraniireducens Rf4 5162838 YP_001232173.1 CDS Gura_3444 NC_009483.1 4052238 4053179 R hypothetical protein complement(4052238..4053179) Geobacter uraniireducens Rf4 5162839 YP_001232174.1 CDS Gura_3445 NC_009483.1 4053427 4054086 D PFAM: protein of unknown function DUF480; hypothetical protein 4053427..4054086 Geobacter uraniireducens Rf4 5163313 YP_001232175.1 CDS Gura_3446 NC_009483.1 4054228 4054698 D PFAM: protein of unknown function DUF55; hypothetical protein 4054228..4054698 Geobacter uraniireducens Rf4 5163314 YP_001232176.1 CDS Gura_3447 NC_009483.1 4054767 4055237 R PFAM: protein of unknown function DUF1456; hypothetical protein complement(4054767..4055237) Geobacter uraniireducens Rf4 5163315 YP_001232177.1 CDS Gura_3448 NC_009483.1 4055464 4056093 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase complement(4055464..4056093) Geobacter uraniireducens Rf4 5163093 YP_001232178.1 CDS Gura_3449 NC_009483.1 4056363 4057271 R PFAM: Pirin domain protein; Pirin domain protein; pirin domain-containing protein complement(4056363..4057271) Geobacter uraniireducens Rf4 5163094 YP_001232179.1 CDS Gura_3450 NC_009483.1 4057461 4058282 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(4057461..4058282) Geobacter uraniireducens Rf4 5163095 YP_001232180.1 CDS Gura_3451 NC_009483.1 4058340 4059089 R PFAM: protein of unknown function DUF72; hypothetical protein complement(4058340..4059089) Geobacter uraniireducens Rf4 5162915 YP_001232181.1 CDS Gura_3452 NC_009483.1 4059086 4060690 R PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; ATP dependent DNA ligase complement(4059086..4060690) Geobacter uraniireducens Rf4 5162916 YP_001232182.1 CDS Gura_3453 NC_009483.1 4060818 4061723 R PFAM: DNA primase, small subunit; DNA primase, small subunit complement(4060818..4061723) Geobacter uraniireducens Rf4 5162917 YP_001232183.1 CDS Gura_3454 NC_009483.1 4061720 4062505 R PFAM: Ku domain protein; Ku domain-containing protein complement(4061720..4062505) Geobacter uraniireducens Rf4 5163323 YP_001232184.1 CDS Gura_3455 NC_009483.1 4062527 4063297 R PFAM: Ku domain protein; Ku domain-containing protein complement(4062527..4063297) Geobacter uraniireducens Rf4 5163324 YP_001232185.1 CDS Gura_3456 NC_009483.1 4063384 4063542 R hypothetical protein complement(4063384..4063542) Geobacter uraniireducens Rf4 5163325 YP_001232186.1 CDS Gura_3457 NC_009483.1 4063568 4063888 R hypothetical protein complement(4063568..4063888) Geobacter uraniireducens Rf4 5163206 YP_001232187.1 CDS Gura_3458 NC_009483.1 4063897 4065138 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter complement(4063897..4065138) Geobacter uraniireducens Rf4 5163207 YP_001232188.1 CDS Gura_3459 NC_009483.1 4065206 4066717 R TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; Methyltransferase type 11; Methyltransferase type 12; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase complement(4065206..4066717) Geobacter uraniireducens Rf4 5163208 YP_001232189.1 CDS Gura_3460 NC_009483.1 4066882 4067622 R PFAM: zinc/iron permease; zinc/iron permease complement(4066882..4067622) Geobacter uraniireducens Rf4 5163691 YP_001232190.1 CDS Gura_3461 NC_009483.1 4067768 4068223 R hypothetical protein complement(4067768..4068223) Geobacter uraniireducens Rf4 5163692 YP_001232191.1 CDS Gura_3462 NC_009483.1 4068269 4069210 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(4068269..4069210) Geobacter uraniireducens Rf4 5163693 YP_001232192.1 CDS Gura_3463 NC_009483.1 4069227 4070108 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter complement(4069227..4070108) Geobacter uraniireducens Rf4 5163064 YP_001232193.1 CDS Gura_3464 NC_009483.1 4071007 4071480 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; glyoxalase/bleomycin resistance protein/dioxygenase 4071007..4071480 Geobacter uraniireducens Rf4 5163065 YP_001232194.1 CDS Gura_3465 NC_009483.1 4071584 4071976 R hypothetical protein complement(4071584..4071976) Geobacter uraniireducens Rf4 5163066 YP_001232195.1 CDS Gura_3466 NC_009483.1 4072541 4075714 D PFAM: acriflavin resistance protein; acriflavin resistance protein 4072541..4075714 Geobacter uraniireducens Rf4 5163820 YP_001232196.1 CDS Gura_3467 NC_009483.1 4075748 4076197 D hypothetical protein 4075748..4076197 Geobacter uraniireducens Rf4 5163821 YP_001232197.1 CDS Gura_3468 NC_009483.1 4076267 4079419 D PFAM: acriflavin resistance protein; acriflavin resistance protein 4076267..4079419 Geobacter uraniireducens Rf4 5163822 YP_001232198.1 CDS Gura_3469 NC_009483.1 4079445 4080380 D hypothetical protein 4079445..4080380 Geobacter uraniireducens Rf4 5164017 YP_001232199.1 CDS Gura_3470 NC_009483.1 4080427 4081173 D hypothetical protein 4080427..4081173 Geobacter uraniireducens Rf4 5164018 YP_001232200.1 CDS Gura_3471 NC_009483.1 4081202 4081531 D PFAM: Propeptide, PepSY amd peptidase M4; peptidase 4081202..4081531 Geobacter uraniireducens Rf4 5164019 YP_001232201.1 CDS Gura_3472 NC_009483.1 4081692 4082567 D hypothetical protein 4081692..4082567 Geobacter uraniireducens Rf4 5163892 YP_001232202.1 CDS Gura_3473 NC_009483.1 4082664 4084406 D PFAM: Peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein 4082664..4084406 Geobacter uraniireducens Rf4 5163893 YP_001232203.1 CDS Gura_3474 NC_009483.1 4084403 4086370 D PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; ABC transporter-like protein 4084403..4086370 Geobacter uraniireducens Rf4 5163894 YP_001232204.1 CDS Gura_3475 NC_009483.1 4086383 4087933 R hypothetical protein complement(4086383..4087933) Geobacter uraniireducens Rf4 5163901 YP_001232205.1 CDS Gura_3476 NC_009483.1 4088249 4089538 D hypothetical protein 4088249..4089538 Geobacter uraniireducens Rf4 5163902 YP_001232206.1 CDS Gura_3477 NC_009483.1 4089816 4090490 D PFAM: sigma-54 factor, interaction domain-containing protein; SMART: AAA ATPase; sigma-54 factor interaction domain-containing protein 4089816..4090490 Geobacter uraniireducens Rf4 5163903 YP_001232207.1 CDS Gura_3479 NC_009483.1 4091334 4092086 D hypothetical protein 4091334..4092086 Geobacter uraniireducens Rf4 5164125 YP_001232208.1 CDS Gura_3480 NC_009483.1 4092187 4092348 R hypothetical protein complement(4092187..4092348) Geobacter uraniireducens Rf4 5164126 YP_001232209.1 CDS Gura_3481 NC_009483.1 4092445 4094100 R TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase large subunit complement(4092445..4094100) Geobacter uraniireducens Rf4 5163556 YP_001232210.1 CDS Gura_3482 NC_009483.1 4094141 4094545 R PFAM: cobalamin B12-binding domain protein; cobalamin B12-binding domain-containing protein complement(4094141..4094545) Geobacter uraniireducens Rf4 5163557 YP_001232211.1 CDS Gura_3483 NC_009483.1 4094722 4098282 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate enzyme domain protein TPP-binding; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein complement(4094722..4098282) Geobacter uraniireducens Rf4 5163558 YP_001232212.1 CDS Gura_3484 NC_009483.1 4098441 4100690 R NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme complement(4098441..4100690) Geobacter uraniireducens Rf4 5164268 YP_001232213.1 CDS Gura_3485 NC_009483.1 4100855 4101727 R TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit alpha complement(4100855..4101727) Geobacter uraniireducens Rf4 5164269 YP_001232214.1 CDS Gura_3486 NC_009483.1 4101740 4102906 R TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; succinyl-CoA synthetase subunit beta complement(4101740..4102906) Geobacter uraniireducens Rf4 5164270 YP_001232215.1 CDS Gura_3487 NC_009483.1 4103074 4105962 R PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; biotin/lipoyl attachment domain-containing protein complement(4103074..4105962) Geobacter uraniireducens Rf4 5163898 YP_001232216.1 CDS Gura_3488 NC_009483.1 4106089 4107813 R PFAM: carboxyl transferase; propionyl-CoA carboxylase complement(4106089..4107813) Geobacter uraniireducens Rf4 5163899 YP_001232217.1 CDS Gura_3489 NC_009483.1 4107893 4108456 R PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; XRE family transcriptional regulator complement(4107893..4108456) Geobacter uraniireducens Rf4 5163900 YP_001232218.1 CDS Gura_3490 NC_009483.1 4109113 4110228 R glucose/sorbosone dehydrogenase-like protein complement(4109113..4110228) Geobacter uraniireducens Rf4 5166757 YP_001232219.1 CDS Gura_3491 NC_009483.1 4110350 4111237 R GTPase or GTP-binding protein-like protein complement(4110350..4111237) Geobacter uraniireducens Rf4 5166758 YP_001232220.1 CDS Gura_3492 NC_009483.1 4111544 4112170 R hypothetical protein complement(4111544..4112170) Geobacter uraniireducens Rf4 5166759 YP_001232221.1 CDS Gura_3493 NC_009483.1 4112697 4113107 R PFAM: PilT protein domain protein; PilT domain-containing protein complement(4112697..4113107) Geobacter uraniireducens Rf4 5164232 YP_001232222.1 CDS Gura_3494 NC_009483.1 4113104 4113349 R TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; AbrB family transcriptional regulator complement(4113104..4113349) Geobacter uraniireducens Rf4 5164233 YP_001232223.1 CDS Gura_3495 NC_009483.1 4113469 4114431 R PFAM: metal-dependent phosphohydrolase, HD sub domain; metal dependent phosphohydrolase complement(4113469..4114431) Geobacter uraniireducens Rf4 5164234 YP_001232224.1 CDS Gura_3496 NC_009483.1 4114471 4114713 R hypothetical protein complement(4114471..4114713) Geobacter uraniireducens Rf4 5164413 YP_001232225.1 CDS Gura_3497 NC_009483.1 4115040 4116452 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein complement(4115040..4116452) Geobacter uraniireducens Rf4 5164414 YP_001232226.1 CDS Gura_3498 NC_009483.1 4116603 4119773 R TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein complement(4116603..4119773) Geobacter uraniireducens Rf4 5164415 YP_001232227.1 CDS Gura_3499 NC_009483.1 4119829 4121016 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(4119829..4121016) Geobacter uraniireducens Rf4 5164505 YP_001232228.1 CDS Gura_3500 NC_009483.1 4121255 4121830 R PFAM: regulatory protein, TetR; TetR family transcriptional regulator complement(4121255..4121830) Geobacter uraniireducens Rf4 5164506 YP_001232229.1 CDS Gura_3501 NC_009483.1 4121992 4122642 R TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; signal peptidase I complement(4121992..4122642) Geobacter uraniireducens Rf4 5164507 YP_001232230.1 CDS Gura_3502 NC_009483.1 4122851 4123417 R PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; ECF subfamily RNA polymerase sigma-24 factor complement(4122851..4123417) Geobacter uraniireducens Rf4 5164620 YP_001232231.1 CDS Gura_3503 NC_009483.1 4123734 4124618 R PFAM: helix-turn-helix- domain containing protein, AraC type; transcription activator, effector binding; transcription activator, effector binding complement(4123734..4124618) Geobacter uraniireducens Rf4 5164621 YP_001232232.1 CDS Gura_3504 NC_009483.1 4124756 4126036 R ATPase AAA complement(4124756..4126036) Geobacter uraniireducens Rf4 5164622 YP_001232233.1 CDS Gura_3505 NC_009483.1 4126143 4126931 R PFAM: penicillin-binding protein, transpeptidase; beta-lactamase complement(4126143..4126931) Geobacter uraniireducens Rf4 5164450 YP_001232234.1 CDS Gura_3506 NC_009483.1 4126979 4127878 R PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(4126979..4127878) Geobacter uraniireducens Rf4 5164451 YP_001232235.1 CDS Gura_3507 NC_009483.1 4128011 4129462 R PFAM: pentapeptide repeat protein; pentapeptide repeat-containing protein complement(4128011..4129462) Geobacter uraniireducens Rf4 5164452 YP_001232236.1 CDS Gura_3508 NC_009483.1 4129557 4129784 R hypothetical protein complement(4129557..4129784) Geobacter uraniireducens Rf4 5163916 YP_001232237.1 CDS Gura_3509 NC_009483.1 4130198 4130944 R PFAM: Methyltransferase type 11; type 11 methyltransferase complement(4130198..4130944) Geobacter uraniireducens Rf4 5163917 YP_001232238.1 CDS Gura_3510 NC_009483.1 4131121 4131822 R PFAM: restriction endonuclease; restriction endonuclease complement(4131121..4131822) Geobacter uraniireducens Rf4 5163918 YP_001232239.1 CDS Gura_3511 NC_009483.1 4131987 4133054 R hypothetical protein complement(4131987..4133054) Geobacter uraniireducens Rf4 5164588 YP_001232240.1 CDS Gura_3512 NC_009483.1 4133390 4134181 R PFAM: protein of unknown function DUF81; hypothetical protein complement(4133390..4134181) Geobacter uraniireducens Rf4 5164589 YP_001232241.1 CDS Gura_3513 NC_009483.1 4134266 4134643 R PFAM: helix-turn-helix, HxlR type; HxlR family transcriptional regulator complement(4134266..4134643) Geobacter uraniireducens Rf4 5164590 YP_001232242.1 CDS Gura_3514 NC_009483.1 4134784 4135188 D PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 4134784..4135188 Geobacter uraniireducens Rf4 5164011 YP_001232243.1 CDS Gura_3515 NC_009483.1 4135224 4135784 R PFAM: nitroreductase; nitroreductase complement(4135224..4135784) Geobacter uraniireducens Rf4 5164012 YP_001232244.1 CDS Gura_3516 NC_009483.1 4135910 4136809 R PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein complement(4135910..4136809) Geobacter uraniireducens Rf4 5164013 YP_001232245.1 CDS Gura_3517 NC_009483.1 4136843 4137307 R PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(4136843..4137307) Geobacter uraniireducens Rf4 5163758 YP_001232246.1 CDS Gura_3518 NC_009483.1 4137359 4137967 R TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I complement(4137359..4137967) Geobacter uraniireducens Rf4 5163759 YP_001232247.1 CDS Gura_3519 NC_009483.1 4138004 4138432 R hypothetical protein complement(4138004..4138432) Geobacter uraniireducens Rf4 5163760 YP_001232248.1 CDS Gura_3520 NC_009483.1 4138538 4138975 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(4138538..4138975) Geobacter uraniireducens Rf4 5163203 YP_001232249.1 CDS Gura_3521 NC_009483.1 4139079 4139774 R PFAM: Helix-turn-helix, type 11 domain protein; helix-turn-helix, type 11 domain-containing protein complement(4139079..4139774) Geobacter uraniireducens Rf4 5163204 YP_001232250.1 CDS Gura_3522 NC_009483.1 4139839 4140213 R hypothetical protein complement(4139839..4140213) Geobacter uraniireducens Rf4 5163205 YP_001232251.1 CDS Gura_3523 NC_009483.1 4140427 4141083 R PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(4140427..4141083) Geobacter uraniireducens Rf4 5166100 YP_001232252.1 CDS Gura_3524 NC_009483.1 4141150 4141512 R PFAM: regulatory protein, MerR; MerR family transcriptional regulator complement(4141150..4141512) Geobacter uraniireducens Rf4 5166101 YP_001232253.1 CDS Gura_3525 NC_009483.1 4141720 4142262 R PFAM: protein of unknown function DUF1697; hypothetical protein complement(4141720..4142262) Geobacter uraniireducens Rf4 5166102 YP_001232254.1 CDS Gura_3526 NC_009483.1 4142383 4143369 R PFAM: aldo/keto reductase; aldo/keto reductase complement(4142383..4143369) Geobacter uraniireducens Rf4 5166614 YP_001232255.1 CDS Gura_3527 NC_009483.1 4143372 4143893 R PFAM: regulatory protein, MarR; MarR family transcriptional regulator complement(4143372..4143893) Geobacter uraniireducens Rf4 5166615 YP_001232256.1 CDS Gura_3528 NC_009483.1 4144115 4144711 R PFAM: ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein complement(4144115..4144711) Geobacter uraniireducens Rf4 5166616 YP_001232257.1 CDS Gura_3529 NC_009483.1 4144735 4145745 R PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; AraC family transcriptional regulator complement(4144735..4145745) Geobacter uraniireducens Rf4 5164726 YP_001232258.1 CDS Gura_3530 NC_009483.1 4145930 4146553 R PFAM: ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein complement(4145930..4146553) Geobacter uraniireducens Rf4 5164727 YP_001232259.1 CDS Gura_3531 NC_009483.1 4146588 4147607 R PFAM: Excinuclease ABC, C subunit domain protein; regulatory protein, ArsR; regulatory protein ArsR complement(4146588..4147607) Geobacter uraniireducens Rf4 5164728 YP_001232260.1 CDS Gura_3532 NC_009483.1 4147882 4149048 D PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 4147882..4149048 Geobacter uraniireducens Rf4 5164169 YP_001232261.1 CDS Gura_3533 NC_009483.1 4149032 4150264 D TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; protein phosphatase 2C domain protein; putative PAS/PAC sensor protein 4149032..4150264 Geobacter uraniireducens Rf4 5164170 YP_001232262.1 CDS Gura_3534 NC_009483.1 4150375 4151154 D catalyzes the formation of propanoyl-CoA from methylmalonyl-CoA; methylmalonyl-CoA decarboxylase 4150375..4151154 Geobacter uraniireducens Rf4 5164171 YP_001232263.1 CDS Gura_3535 NC_009483.1 4151815 4152108 R hypothetical protein complement(4151815..4152108) Geobacter uraniireducens Rf4 5163913 YP_001232264.1 CDS Gura_3536 NC_009483.1 4152156 4152422 R hypothetical protein complement(4152156..4152422) Geobacter uraniireducens Rf4 5163914 YP_001232265.1 CDS Gura_3537 NC_009483.1 4152622 4153965 R PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase complement(4152622..4153965) Geobacter uraniireducens Rf4 5163915 YP_001232266.1 CDS Gura_3538 NC_009483.1 4154422 4156404 D PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; SMART: AAA ATPase; Fis family GAF modulated sigma54 specific transcriptional regulator 4154422..4156404 Geobacter uraniireducens Rf4 5163770 YP_001232267.1 CDS Gura_3539 NC_009483.1 4156516 4157004 R TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; molybdenum cofactor synthesis domain-containing protein complement(4156516..4157004) Geobacter uraniireducens Rf4 5163771 YP_001232268.1 CDS Gura_3540 NC_009483.1 4157083 4157565 R TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; molybdenum cofactor biosynthesis protein C complement(4157083..4157565) Geobacter uraniireducens Rf4 5163772 YP_001232269.1 CDS Gura_3541 NC_009483.1 4157680 4158897 R TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; molybdenum cofactor synthesis domain-containing protein complement(4157680..4158897) Geobacter uraniireducens Rf4 5164014 YP_001232270.1 CDS Gura_3542 NC_009483.1 4158945 4160042 R PFAM: ABC transporter related; TOBE domain protein; transport-associated protein OB domain protein; SMART: AAA ATPase; ABC transporter-like protein complement(4158945..4160042) Geobacter uraniireducens Rf4 5164015 YP_001232271.1 CDS Gura_3543 NC_009483.1 4160039 4160737 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(4160039..4160737) Geobacter uraniireducens Rf4 5164016 YP_001232272.1 CDS Gura_3544 NC_009483.1 4160737 4161594 R tungstate ABC transporter permease component-like protein complement(4160737..4161594) Geobacter uraniireducens Rf4 5163877 YP_001232273.1 CDS Gura_3545 NC_009483.1 4161718 4162101 R PFAM: molybdopterin biosynthesis MoaE protein; molybdopterin biosynthesis MoaE protein complement(4161718..4162101) Geobacter uraniireducens Rf4 5163878 YP_001232274.1 CDS Gura_3546 NC_009483.1 4162414 4163211 R PFAM: regulatory protein, IclR; regulatory protein IclR complement(4162414..4163211) Geobacter uraniireducens Rf4 5163879 YP_001232275.1 CDS Gura_3547 NC_009483.1 4163208 4163849 R hypothetical protein complement(4163208..4163849) Geobacter uraniireducens Rf4 5163585 YP_001232276.1 CDS Gura_3548 NC_009483.1 4163871 4164116 R PFAM: thiamineS protein; sulfur transfer protein ThiS complement(4163871..4164116) Geobacter uraniireducens Rf4 5163586 YP_001232277.1 CDS Gura_3549 NC_009483.1 4164282 4164536 D hypothetical protein 4164282..4164536 Geobacter uraniireducens Rf4 5163587 YP_001232278.1 CDS Gura_3550 NC_009483.1 4164643 4166379 R PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase-like; aldehyde ferredoxin oxidoreductase complement(4164643..4166379) Geobacter uraniireducens Rf4 5163235 YP_001232279.1 CDS Gura_3551 NC_009483.1 4166536 4167651 R PFAM: domain of unknown function DUF1745; hypothetical protein complement(4166536..4167651) Geobacter uraniireducens Rf4 5163236 YP_001232280.1 CDS Gura_3552 NC_009483.1 4167667 4167870 R hypothetical protein complement(4167667..4167870) Geobacter uraniireducens Rf4 5163237 YP_001232281.1 CDS Gura_3553 NC_009483.1 4167960 4169393 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(4167960..4169393) Geobacter uraniireducens Rf4 5163031 YP_001232282.1 CDS Gura_3554 NC_009483.1 4169467 4170357 R PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta complement(4169467..4170357) Geobacter uraniireducens Rf4 5163032 YP_001232283.1 CDS Gura_3555 NC_009483.1 4170444 4170722 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(4170444..4170722) Geobacter uraniireducens Rf4 5163033 YP_001232284.1 CDS Gura_3556 NC_009483.1 4170719 4172017 R PFAM: monooxygenase, FAD-binding; HI0933 family protein; FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(4170719..4172017) Geobacter uraniireducens Rf4 5163301 YP_001232285.1 CDS Gura_3557 NC_009483.1 4172014 4173018 R PFAM: electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha complement(4172014..4173018) Geobacter uraniireducens Rf4 5163302 YP_001232286.1 CDS Gura_3558 NC_009483.1 4173018 4174979 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase complement(4173018..4174979) Geobacter uraniireducens Rf4 5163303 YP_001232287.1 CDS Gura_3559 NC_009483.1 4175004 4176047 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(4175004..4176047) Geobacter uraniireducens Rf4 5163012 YP_001232288.1 CDS Gura_3560 NC_009483.1 4176037 4176291 R hypothetical protein complement(4176037..4176291) Geobacter uraniireducens Rf4 5163013 YP_001232289.1 CDS Gura_3561 NC_009483.1 4176953 4178212 R PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase complement(4176953..4178212) Geobacter uraniireducens Rf4 5163014 YP_001232290.1 CDS Gura_3562 NC_009483.1 4178269 4178685 R TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; hemerythrin-like metal-binding protein complement(4178269..4178685) Geobacter uraniireducens Rf4 5162864 YP_001232291.1 CDS Gura_3563 NC_009483.1 4178709 4179326 R TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; metal dependent phosphohydrolase complement(4178709..4179326) Geobacter uraniireducens Rf4 5162865 YP_001232292.1 CDS Gura_3565 NC_009483.1 4180555 4182480 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase complement(4180555..4182480) Geobacter uraniireducens Rf4 5163782 YP_001232293.1 CDS Gura_3566 NC_009483.1 4182610 4184016 R PFAM: VWA containing CoxE family protein; VWA containing CoxE family protein complement(4182610..4184016) Geobacter uraniireducens Rf4 5163783 YP_001232294.1 CDS Gura_3567 NC_009483.1 4184019 4184969 R PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATPase complement(4184019..4184969) Geobacter uraniireducens Rf4 5163784 YP_001232295.1 CDS Gura_3568 NC_009483.1 4185125 4186330 R PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(4185125..4186330) Geobacter uraniireducens Rf4 5164853 YP_001232296.1 CDS Gura_3569 NC_009483.1 4186798 4187895 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(4186798..4187895) Geobacter uraniireducens Rf4 5164854 YP_001232297.1 CDS Gura_3570 NC_009483.1 4188450 4188887 R PFAM: MOSC domain containing protein; MOSC domain-containing protein complement(4188450..4188887) Geobacter uraniireducens Rf4 5164855 YP_001232298.1 CDS Gura_3571 NC_009483.1 4189028 4190005 R TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A complement(4189028..4190005) Geobacter uraniireducens Rf4 5164906 YP_001232299.1 CDS Gura_3572 NC_009483.1 4190058 4191431 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator complement(4190058..4191431) Geobacter uraniireducens Rf4 5164907 YP_001232300.1 CDS Gura_3573 NC_009483.1 4191419 4192627 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(4191419..4192627) Geobacter uraniireducens Rf4 5164908 YP_001232301.1 CDS Gura_3574 NC_009483.1 4192629 4193792 R PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(4192629..4193792) Geobacter uraniireducens Rf4 5163764 YP_001232302.1 CDS Gura_3575 NC_009483.1 4194647 4195891 D hypothetical protein 4194647..4195891 Geobacter uraniireducens Rf4 5163765 YP_001232303.1 CDS Gura_3576 NC_009483.1 4195960 4196232 D hypothetical protein 4195960..4196232 Geobacter uraniireducens Rf4 5163766 YP_001232304.1 CDS Gura_3577 NC_009483.1 4196305 4196835 D hypothetical protein 4196305..4196835 Geobacter uraniireducens Rf4 5164244 YP_001232305.1 CDS Gura_3578 NC_009483.1 4196878 4197153 D hypothetical protein 4196878..4197153 Geobacter uraniireducens Rf4 5164245 YP_001232306.1 CDS Gura_3579 NC_009483.1 4197328 4198218 D hypothetical protein 4197328..4198218 Geobacter uraniireducens Rf4 5164246 YP_001232307.1 CDS Gura_3580 NC_009483.1 4198258 4198557 D PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 4198258..4198557 Geobacter uraniireducens Rf4 5163000 YP_001232308.1 CDS Gura_3581 NC_009483.1 4199102 4199680 D heterodisulfide reductase subunit C-like protein 4199102..4199680 Geobacter uraniireducens Rf4 5163001 YP_001232309.1 CDS Gura_3582 NC_009483.1 4199924 4200811 D PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; CoB--CoM heterodisulfide reductase 4199924..4200811 Geobacter uraniireducens Rf4 5163002 YP_001232310.1 CDS Gura_3583 NC_009483.1 4200962 4202959 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4200962..4202959 Geobacter uraniireducens Rf4 5163108 YP_001232311.1 CDS Gura_3584 NC_009483.1 4202984 4203550 D PFAM: methyl-viologen-reducing hydrogenase, delta subunit; methyl-viologen-reducing hydrogenase subunit delta 4202984..4203550 Geobacter uraniireducens Rf4 5163109 YP_001232312.1 CDS Gura_3585 NC_009483.1 4203668 4204615 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4203668..4204615 Geobacter uraniireducens Rf4 5163110 YP_001232313.1 CDS Gura_3586 NC_009483.1 4204785 4205789 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4204785..4205789 Geobacter uraniireducens Rf4 5162924 YP_001232314.1 CDS Gura_3587 NC_009483.1 4205870 4206712 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding subunit 4205870..4206712 Geobacter uraniireducens Rf4 5162925 YP_001232315.1 CDS Gura_3588 NC_009483.1 4206971 4208311 D PFAM: Radical SAM domain protein; radical SAM domain-containing protein 4206971..4208311 Geobacter uraniireducens Rf4 5162926 YP_001232316.1 CDS Gura_3589 NC_009483.1 4208321 4209016 R hypothetical protein complement(4208321..4209016) Geobacter uraniireducens Rf4 5164205 YP_001232317.1 CDS Gura_3590 NC_009483.1 4209032 4209610 R hypothetical protein complement(4209032..4209610) Geobacter uraniireducens Rf4 5164206 YP_001232318.1 CDS Gura_3591 NC_009483.1 4209864 4213325 R PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase complement(4209864..4213325) Geobacter uraniireducens Rf4 5164207 YP_001232319.1 CDS Gura_3592 NC_009483.1 4213387 4213638 R hypothetical protein complement(4213387..4213638) Geobacter uraniireducens Rf4 5167090 YP_001232320.1 CDS Gura_3593 NC_009483.1 4214005 4215423 D PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 4214005..4215423 Geobacter uraniireducens Rf4 5167091 YP_001232321.1 CDS Gura_3594 NC_009483.1 4215623 4216225 D hypothetical protein 4215623..4216225 Geobacter uraniireducens Rf4 5167092 YP_001232322.1 CDS Gura_3595 NC_009483.1 4216233 4218764 R RND efflux transporter complement(4216233..4218764) Geobacter uraniireducens Rf4 5165214 YP_001232323.1 CDS Gura_3596 NC_009483.1 4218782 4219390 R PFAM: outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA complement(4218782..4219390) Geobacter uraniireducens Rf4 5165215 YP_001232324.1 CDS Gura_3597 NC_009483.1 4219567 4220610 R PFAM: protein of unknown function DUF1016; hypothetical protein complement(4219567..4220610) Geobacter uraniireducens Rf4 5165216 YP_001232325.1 CDS Gura_3598 NC_009483.1 4220626 4221612 R TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; death-on-curing family protein complement(4220626..4221612) Geobacter uraniireducens Rf4 5163346 YP_001232326.1 CDS Gura_3599 NC_009483.1 4221684 4223132 R hypothetical protein complement(4221684..4223132) Geobacter uraniireducens Rf4 5163347 YP_001232327.1 CDS Gura_3600 NC_009483.1 4223162 4225378 R PFAM: N-6 DNA methylase; protein of unknown function DUF450; N-6 DNA methylase complement(4223162..4225378) Geobacter uraniireducens Rf4 5163348 YP_001232328.1 CDS Gura_3601 NC_009483.1 4225453 4226334 R PFAM: restriction endonuclease; restriction endonuclease complement(4225453..4226334) Geobacter uraniireducens Rf4 5162804 YP_001232329.1 CDS Gura_3602 NC_009483.1 4226446 4226838 R PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(4226446..4226838) Geobacter uraniireducens Rf4 5162805 YP_001232330.1 CDS Gura_3603 NC_009483.1 4226831 4227145 R hypothetical protein complement(4226831..4227145) Geobacter uraniireducens Rf4 5162806 YP_001232331.1 CDS Gura_3604 NC_009483.1 4227353 4227766 R PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ complement(4227353..4227766) Geobacter uraniireducens Rf4 5163352 YP_001232332.1 CDS Gura_3605 NC_009483.1 4227726 4228775 R PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase complement(4227726..4228775) Geobacter uraniireducens Rf4 5163353 YP_001232333.1 CDS Gura_3606 NC_009483.1 4228772 4230022 R PFAM: beta-ketoacyl synthase; beta-ketoacyl synthase complement(4228772..4230022) Geobacter uraniireducens Rf4 5163354 YP_001232334.1 CDS Gura_3607 NC_009483.1 4230313 4231053 R PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR complement(4230313..4231053) Geobacter uraniireducens Rf4 5163408 YP_001232335.1 CDS Gura_3608 NC_009483.1 4231266 4232645 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(4231266..4232645) Geobacter uraniireducens Rf4 5163409 YP_001232336.1 CDS Gura_3609 NC_009483.1 4232645 4233163 R PFAM: thioesterase superfamily protein; thioesterase superfamily protein complement(4232645..4233163) Geobacter uraniireducens Rf4 5163410 YP_001232337.1 CDS Gura_3610 NC_009483.1 4233160 4233999 R (acyl-carrier-protein) S-malonyltransferase-like protein complement(4233160..4233999) Geobacter uraniireducens Rf4 5164942 YP_001232338.1 CDS Gura_3611 NC_009483.1 4234175 4235464 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(4234175..4235464) Geobacter uraniireducens Rf4 5164943 YP_001232339.1 CDS Gura_3612 NC_009483.1 4235461 4235718 R hypothetical protein complement(4235461..4235718) Geobacter uraniireducens Rf4 5164944 YP_001232340.1 CDS Gura_3613 NC_009483.1 4235719 4236621 R PFAM: lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase complement(4235719..4236621) Geobacter uraniireducens Rf4 5166465 YP_001232341.1 CDS Gura_3614 NC_009483.1 4236654 4238009 R PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(4236654..4238009) Geobacter uraniireducens Rf4 5166466 YP_001232342.1 CDS Gura_3615 NC_009483.1 4238006 4239403 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(4238006..4239403) Geobacter uraniireducens Rf4 5166467 YP_001232343.1 CDS Gura_3616 NC_009483.1 4239461 4240129 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(4239461..4240129) Geobacter uraniireducens Rf4 5166675 YP_001232344.1 CDS Gura_3617 NC_009483.1 4240114 4240959 R PFAM: polysaccharide deacetylase; polysaccharide deacetylase complement(4240114..4240959) Geobacter uraniireducens Rf4 5166676 YP_001232345.1 CDS Gura_3618 NC_009483.1 4241221 4242309 D PFAM: aminodeoxychorismate lyase; aminodeoxychorismate lyase 4241221..4242309 Geobacter uraniireducens Rf4 5166677 YP_001232346.1 CDS Gura_3619 NC_009483.1 4242278 4244221 D PFAM: TPR repeat-containing protein; heat shock protein DnaJ domain protein; response regulator receiver; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; response regulator receiver protein 4242278..4244221 Geobacter uraniireducens Rf4 5166578 YP_001232347.1 CDS Gura_3620 NC_009483.1 4244285 4244548 R hypothetical protein complement(4244285..4244548) Geobacter uraniireducens Rf4 5166579 YP_001232348.1 CDS Gura_3621 NC_009483.1 4244813 4245982 R PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; hypothetical protein complement(4244813..4245982) Geobacter uraniireducens Rf4 5166580 YP_001232349.1 CDS Gura_3622 NC_009483.1 4246280 4247044 D TIGRFAM: putative undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; putative undecaprenol kinase 4246280..4247044 Geobacter uraniireducens Rf4 5166328 YP_001232350.1 CDS Gura_3623 NC_009483.1 4247188 4248102 D TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein 4247188..4248102 Geobacter uraniireducens Rf4 5166329 YP_001232351.1 CDS Gura_3624 NC_009483.1 4248099 4249577 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 4248099..4249577 Geobacter uraniireducens Rf4 5166330 YP_001232352.1 CDS Gura_3625 NC_009483.1 4249564 4250913 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 4249564..4250913 Geobacter uraniireducens Rf4 5163072 YP_001232353.1 CDS Gura_3626 NC_009483.1 4251399 4252298 D TIGRFAM: cytochrome C family protein; cytochrome C family protein 4251399..4252298 Geobacter uraniireducens Rf4 5163073 YP_001232354.1 CDS Gura_3627 NC_009483.1 4252333 4254840 D hypothetical protein 4252333..4254840 Geobacter uraniireducens Rf4 5163074 YP_001232355.1 CDS Gura_3628 NC_009483.1 4255169 4256455 R transposase complement(4255169..4256455) Geobacter uraniireducens Rf4 5164235 YP_001232356.1 CDS Gura_3629 NC_009483.1 4256607 4258100 D PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein 4256607..4258100 Geobacter uraniireducens Rf4 5164236 YP_001232357.1 CDS Gura_3630 NC_009483.1 4258097 4259521 D PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein 4258097..4259521 Geobacter uraniireducens Rf4 5164237 YP_001232358.1 CDS Gura_3631 NC_009483.1 4259544 4259651 D hypothetical protein 4259544..4259651 Geobacter uraniireducens Rf4 5165452 YP_001232359.1 CDS Gura_3632 NC_009483.1 4259729 4260679 R PFAM: protein of unknown function DUF1568; Chromosomal replication initiator, DnaA C-terminal domain; hypothetical protein complement(4259729..4260679) Geobacter uraniireducens Rf4 5165453 YP_001232360.1 CDS Gura_3633 NC_009483.1 4260811 4261758 R PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(4260811..4261758) Geobacter uraniireducens Rf4 5165454 YP_001232361.1 CDS Gura_3634 NC_009483.1 4261872 4262036 R hypothetical protein complement(4261872..4262036) Geobacter uraniireducens Rf4 5163025 YP_001232362.1 CDS Gura_3635 NC_009483.1 4262020 4262199 R hypothetical protein complement(4262020..4262199) Geobacter uraniireducens Rf4 5163026 YP_001232363.1 CDS Gura_3636 NC_009483.1 4262229 4263869 R TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; YidE/YbjL duplication complement(4262229..4263869) Geobacter uraniireducens Rf4 5163027 YP_001232364.1 CDS Gura_3638 NC_009483.1 4264288 4264824 R hypothetical protein complement(4264288..4264824) Geobacter uraniireducens Rf4 5166945 YP_001232365.1 CDS Gura_3639 NC_009483.1 4265131 4267662 R PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase complement(4265131..4267662) Geobacter uraniireducens Rf4 5166946 YP_001232366.1 CDS Gura_3640 NC_009483.1 4267814 4269832 R PFAM: glucose-inhibited division protein A; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(4267814..4269832) Geobacter uraniireducens Rf4 5164253 YP_001232367.1 CDS Gura_3641 NC_009483.1 4270136 4271260 D leucyl aminopeptidase 4270136..4271260 Geobacter uraniireducens Rf4 5164254 YP_001232368.1 CDS Gura_3642 NC_009483.1 4271395 4273029 D PFAM: protein of unknown function DUF342; hypothetical protein 4271395..4273029 Geobacter uraniireducens Rf4 5164255 YP_001232369.1 CDS Gura_3643 NC_009483.1 4273080 4273727 D TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 4273080..4273727 Geobacter uraniireducens Rf4 5164350 YP_001232370.1 CDS Gura_3644 NC_009483.1 4273967 4274749 R PFAM: regulatory protein, IclR; regulatory protein IclR complement(4273967..4274749) Geobacter uraniireducens Rf4 5164351 YP_001232371.1 CDS Gura_3645 NC_009483.1 4275148 4275603 D PFAM: UspA domain protein; UspA domain-containing protein 4275148..4275603 Geobacter uraniireducens Rf4 5164352 YP_001232372.1 CDS Gura_3646 NC_009483.1 4275720 4277288 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 4275720..4277288 Geobacter uraniireducens Rf4 5166817 YP_001232373.1 CDS Gura_3647 NC_009483.1 4277405 4278820 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator complement(4277405..4278820) Geobacter uraniireducens Rf4 5166818 YP_001232374.1 CDS Gura_3648 NC_009483.1 4279513 4279761 D hypothetical protein 4279513..4279761 Geobacter uraniireducens Rf4 5166819 YP_001232375.1 CDS Gura_3649 NC_009483.1 4279929 4280309 D PFAM: response regulator receiver; response regulator receiver protein 4279929..4280309 Geobacter uraniireducens Rf4 5165171 YP_001232376.1 CDS Gura_3650 NC_009483.1 4280360 4280605 D hypothetical protein 4280360..4280605 Geobacter uraniireducens Rf4 5165172 YP_001232377.1 CDS Gura_3651 NC_009483.1 4280669 4280836 D hypothetical protein 4280669..4280836 Geobacter uraniireducens Rf4 5165173 YP_001232378.1 CDS Gura_3652 NC_009483.1 4280937 4281467 D hypothetical protein 4280937..4281467 Geobacter uraniireducens Rf4 5165902 YP_001232379.1 CDS Gura_3653 NC_009483.1 4281529 4282452 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 4281529..4282452 Geobacter uraniireducens Rf4 5165903 YP_001232380.1 CDS Gura_3654 NC_009483.1 4282449 4283846 D polysulfide reductase-like protein 4282449..4283846 Geobacter uraniireducens Rf4 5165904 YP_001232381.1 CDS Gura_3655 NC_009483.1 4283918 4284682 D hypothetical protein 4283918..4284682 Geobacter uraniireducens Rf4 5165922 YP_001232382.1 CDS Gura_3656 NC_009483.1 4284837 4285703 D PFAM: histidine kinase, HAMP region domain protein; histidine kinase 4284837..4285703 Geobacter uraniireducens Rf4 5165923 YP_001232383.1 CDS Gura_3657 NC_009483.1 4285920 4286465 D hypothetical protein 4285920..4286465 Geobacter uraniireducens Rf4 5165924 YP_001232384.1 CDS Gura_3658 NC_009483.1 4286795 4286998 D TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; thiamine biosynthesis protein ThiS 4286795..4286998 Geobacter uraniireducens Rf4 5166702 YP_001232385.1 CDS thiG NC_009483.1 4287022 4287804 D functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 4287022..4287804 Geobacter uraniireducens Rf4 5166703 YP_001232386.1 CDS Gura_3660 NC_009483.1 4287801 4288463 D TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 4287801..4288463 Geobacter uraniireducens Rf4 5166602 YP_001232387.1 CDS Gura_3661 NC_009483.1 4288465 4289424 D TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; putative radical SAM protein 4288465..4289424 Geobacter uraniireducens Rf4 5166603 YP_001232388.1 CDS Gura_3662 NC_009483.1 4289855 4291519 D PFAM: AAA-4 family protein; putative transcriptional regulator 4289855..4291519 Geobacter uraniireducens Rf4 5166604 YP_001232389.1 CDS Gura_3663 NC_009483.1 4291503 4291769 R hypothetical protein complement(4291503..4291769) Geobacter uraniireducens Rf4 5165778 YP_001232390.1 CDS Gura_3664 NC_009483.1 4291966 4292340 D hypothetical protein 4291966..4292340 Geobacter uraniireducens Rf4 5165779 YP_001232391.1 CDS Gura_3665 NC_009483.1 4292428 4293642 D PFAM: transposase, mutator type; transposase, mutator type 4292428..4293642 Geobacter uraniireducens Rf4 5165780 YP_001232392.1 CDS Gura_3666 NC_009483.1 4293761 4294417 D PFAM: fumarylacetoacetate (FAA) hydrolase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 4293761..4294417 Geobacter uraniireducens Rf4 5166947 YP_001232393.1 CDS Gura_3667 NC_009483.1 4294736 4295185 R hypothetical protein complement(4294736..4295185) Geobacter uraniireducens Rf4 5166948 YP_001232394.1 CDS Gura_3668 NC_009483.1 4295219 4296100 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(4295219..4296100) Geobacter uraniireducens Rf4 5166949 YP_001232395.1 CDS Gura_3669 NC_009483.1 4296113 4296343 R hypothetical protein complement(4296113..4296343) Geobacter uraniireducens Rf4 5165153 YP_001232396.1 CDS Gura_3670 NC_009483.1 4296402 4296602 R PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein complement(4296402..4296602) Geobacter uraniireducens Rf4 5165154 YP_001232397.1 CDS Gura_3671 NC_009483.1 4296808 4299468 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase complement(4296808..4299468) Geobacter uraniireducens Rf4 5165155 YP_001232398.1 CDS glyS NC_009483.1 4299724 4301790 R glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta complement(4299724..4301790) Geobacter uraniireducens Rf4 5167066 YP_001232399.1 CDS glyQ NC_009483.1 4301790 4302665 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(4301790..4302665) Geobacter uraniireducens Rf4 5167067 YP_001232400.1 CDS Gura_3674 NC_009483.1 4302994 4303809 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 4302994..4303809 Geobacter uraniireducens Rf4 5167068 YP_001232401.1 CDS rplI NC_009483.1 4303906 4304349 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(4303906..4304349) Geobacter uraniireducens Rf4 5163183 YP_001232402.1 CDS Gura_3676 NC_009483.1 4304373 4305317 R hypothetical protein complement(4304373..4305317) Geobacter uraniireducens Rf4 5163184 YP_001232403.1 CDS rpsR NC_009483.1 4305333 4305608 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(4305333..4305608) Geobacter uraniireducens Rf4 5163185 YP_001232404.1 CDS rpsF NC_009483.1 4305613 4305999 R binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 complement(4305613..4305999) Geobacter uraniireducens Rf4 5162682 YP_001232405.1 CDS Gura_3679 NC_009483.1 4306364 4307458 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(4306364..4307458) Geobacter uraniireducens Rf4 5162683 YP_001232406.1 CDS Gura_3680 NC_009483.1 4307470 4308045 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(4307470..4308045) Geobacter uraniireducens Rf4 5162684 YP_001232407.1 CDS Gura_3681 NC_009483.1 4308067 4308651 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc complement(4308067..4308651) Geobacter uraniireducens Rf4 5166678 YP_001232408.1 CDS Gura_3682 NC_009483.1 4308711 4309661 R TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase complement(4308711..4309661) Geobacter uraniireducens Rf4 5166679 YP_001232409.1 CDS Gura_3683 NC_009483.1 4309824 4310666 R An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(4309824..4310666) Geobacter uraniireducens Rf4 5165339 YP_001232410.1 CDS Gura_3684 NC_009483.1 4310889 4311587 R PFAM: carbonic anhydrase; carbonic anhydrase complement(4310889..4311587) Geobacter uraniireducens Rf4 5165340 YP_001232411.1 CDS Gura_3685 NC_009483.1 4311772 4312485 R PFAM: alanine racemase domain protein; alanine racemase domain-containing protein complement(4311772..4312485) Geobacter uraniireducens Rf4 5165896 YP_001232412.1 CDS Gura_3686 NC_009483.1 4312585 4313169 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(4312585..4313169) Geobacter uraniireducens Rf4 5165897 YP_001232413.1 CDS Gura_3687 NC_009483.1 4313150 4313440 R hypothetical protein complement(4313150..4313440) Geobacter uraniireducens Rf4 5165898 YP_001232414.1 CDS Gura_3688 NC_009483.1 4313495 4314802 R TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid complement(4313495..4314802) Geobacter uraniireducens Rf4 5165810 YP_001232415.1 CDS Gura_3689 NC_009483.1 4314910 4317180 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining; maintains net negative superhelicity; DNA topoisomerase I complement(4314910..4317180) Geobacter uraniireducens Rf4 5165811 YP_001232416.1 CDS Gura_3690 NC_009483.1 4317223 4318302 R TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; DNA protecting protein DprA complement(4317223..4318302) Geobacter uraniireducens Rf4 5165812 YP_001232417.1 CDS Gura_3691 NC_009483.1 4318354 4319376 R PFAM: Peptidoglycan-binding LysM; peptidoglycan-binding LysM complement(4318354..4319376) Geobacter uraniireducens Rf4 5162961 YP_001232418.1 CDS Gura_3692 NC_009483.1 4319394 4320113 R TIGRFAM: Tetratricopeptide domain protein; tetratricopeptide domain-containing protein complement(4319394..4320113) Geobacter uraniireducens Rf4 5162962 YP_001232419.1 CDS Gura_3693 NC_009483.1 4320453 4321667 D PFAM: peptidase U32; peptidase U32 4320453..4321667 Geobacter uraniireducens Rf4 5162963 YP_001232420.1 CDS Gura_3694 NC_009483.1 4321744 4323405 D PFAM: glycosyl transferase, family 39; glycosyl transferase family protein 4321744..4323405 Geobacter uraniireducens Rf4 5165127 YP_001232421.1 CDS Gura_3695 NC_009483.1 4323474 4324637 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; DegT/DnrJ/EryC1/StrS aminotransferase 4323474..4324637 Geobacter uraniireducens Rf4 5165128 YP_001232422.1 CDS Gura_3696 NC_009483.1 4324729 4325667 D PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 4324729..4325667 Geobacter uraniireducens Rf4 5165129 YP_001232423.1 CDS Gura_3697 NC_009483.1 4325785 4326711 D PFAM: formyl transferase domain protein; putative formyltransferase 4325785..4326711 Geobacter uraniireducens Rf4 5165253 YP_001232424.1 CDS Gura_3698 NC_009483.1 4326808 4327848 D PFAM: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase family protein 4326808..4327848 Geobacter uraniireducens Rf4 5165254 YP_001232425.1 CDS Gura_3699 NC_009483.1 4327954 4328847 D PFAM: polysaccharide deacetylase; polysaccharide deacetylase 4327954..4328847 Geobacter uraniireducens Rf4 5165255 YP_001232426.1 CDS Gura_3700 NC_009483.1 4328852 4329130 D hypothetical protein 4328852..4329130 Geobacter uraniireducens Rf4 5164190 YP_001232427.1 CDS Gura_3701 NC_009483.1 4329123 4330505 D PFAM: peptidase U62, modulator of DNA gyrase; C69 family peptidase 4329123..4330505 Geobacter uraniireducens Rf4 5164191 YP_001232428.1 CDS Gura_3702 NC_009483.1 4330525 4331391 R hypothetical protein complement(4330525..4331391) Geobacter uraniireducens Rf4 5164192 YP_001232429.1 CDS Gura_3703 NC_009483.1 4331450 4332664 R PFAM: transposase, mutator type; transposase, mutator type complement(4331450..4332664) Geobacter uraniireducens Rf4 5165516 YP_001232430.1 CDS Gura_3704 NC_009483.1 4333121 4334335 D PFAM: transposase, mutator type; transposase, mutator type 4333121..4334335 Geobacter uraniireducens Rf4 5165517 YP_001232431.1 CDS Gura_3705 NC_009483.1 4334430 4335479 R PFAM: Mammalian cell entry related domain protein; hypothetical protein complement(4334430..4335479) Geobacter uraniireducens Rf4 5165518 YP_001232432.1 CDS Gura_3706 NC_009483.1 4335559 4336335 R PFAM: protein of unknown function DUF140; hypothetical protein complement(4335559..4336335) Geobacter uraniireducens Rf4 5165766 YP_001232433.1 CDS Gura_3707 NC_009483.1 4336335 4337849 R hypothetical protein complement(4336335..4337849) Geobacter uraniireducens Rf4 5165767 YP_001232434.1 CDS Gura_3708 NC_009483.1 4338241 4338768 R PFAM: aconitate hydratase domain protein; aconitate hydratase domain-containing protein complement(4338241..4338768) Geobacter uraniireducens Rf4 5165768 YP_001232435.1 CDS Gura_3709 NC_009483.1 4338790 4340073 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit complement(4338790..4340073) Geobacter uraniireducens Rf4 5162607 YP_001232436.1 CDS Gura_3710 NC_009483.1 4340239 4341294 D PFAM: conserved hypothetical protein 730; hypothetical protein 4340239..4341294 Geobacter uraniireducens Rf4 5162608 YP_001232437.1 CDS Gura_3711 NC_009483.1 4341481 4341681 D PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 4341481..4341681 Geobacter uraniireducens Rf4 5162609 YP_001232438.1 CDS Gura_3712 NC_009483.1 4341758 4343569 R hypothetical protein complement(4341758..4343569) Geobacter uraniireducens Rf4 5164888 YP_001232439.1 CDS Gura_3713 NC_009483.1 4343596 4344096 R hypothetical protein complement(4343596..4344096) Geobacter uraniireducens Rf4 5164889 YP_001232440.1 CDS Gura_3714 NC_009483.1 4344382 4345338 R hypothetical protein complement(4344382..4345338) Geobacter uraniireducens Rf4 5164890 YP_001232441.1 CDS Gura_3715 NC_009483.1 4345760 4347310 R catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase complement(4345760..4347310) Geobacter uraniireducens Rf4 5165601 YP_001232442.1 CDS Gura_3716 NC_009483.1 4347748 4348545 R TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase complement(4347748..4348545) Geobacter uraniireducens Rf4 5165602 YP_001232443.1 CDS Gura_3717 NC_009483.1 4348542 4349183 R catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase complement(4348542..4349183) Geobacter uraniireducens Rf4 5165603 YP_001232444.1 CDS Gura_3718 NC_009483.1 4349306 4350322 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(4349306..4350322) Geobacter uraniireducens Rf4 5164533 YP_001232445.1 CDS ilvH NC_009483.1 4350377 4350868 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(4350377..4350868) Geobacter uraniireducens Rf4 5164534 YP_001232446.1 CDS Gura_3720 NC_009483.1 4350956 4352656 R TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; acetolactate synthase, large subunit type complement(4350956..4352656) Geobacter uraniireducens Rf4 5164535 YP_001232447.1 CDS Gura_3721 NC_009483.1 4352732 4354393 R catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase complement(4352732..4354393) Geobacter uraniireducens Rf4 5162988 YP_001232448.1 CDS Gura_3722 NC_009483.1 4354605 4355477 R hypothetical protein complement(4354605..4355477) Geobacter uraniireducens Rf4 5162989 YP_001232449.1 CDS Gura_3723 NC_009483.1 4355492 4362352 R PFAM: Fibronectin, type III domain protein; fibronectin I domain-containing protein complement(4355492..4362352) Geobacter uraniireducens Rf4 5162990 YP_001232450.1 CDS Gura_3724 NC_009483.1 4362367 4367442 R TIGRFAM: cytochrome C family protein; cytochrome C family protein complement(4362367..4367442) Geobacter uraniireducens Rf4 5165943 YP_001232451.1 CDS Gura_3725 NC_009483.1 4367797 4368483 R PFAM: peptidase M22, glycoprotease; peptidase M22, glycoprotease complement(4367797..4368483) Geobacter uraniireducens Rf4 5165944 YP_001232452.1 CDS Gura_3726 NC_009483.1 4368500 4369567 R TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; putative membrane-associated zinc metalloprotease complement(4368500..4369567) Geobacter uraniireducens Rf4 5165945 YP_001232453.1 CDS Gura_3727 NC_009483.1 4369619 4370779 R catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(4369619..4370779) Geobacter uraniireducens Rf4 5166594 YP_001232454.1 CDS Gura_3728 NC_009483.1 4370855 4371601 R PFAM: phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase complement(4370855..4371601) Geobacter uraniireducens Rf4 5166595 YP_001232455.1 CDS Gura_3729 NC_009483.1 4371690 4372460 R catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase complement(4371690..4372460) Geobacter uraniireducens Rf4 5166596 YP_001232456.1 CDS frr NC_009483.1 4372658 4373215 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(4372658..4373215) Geobacter uraniireducens Rf4 5166459 YP_001232457.1 CDS pyrH NC_009483.1 4373217 4373936 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(4373217..4373936) Geobacter uraniireducens Rf4 5166460 YP_001232458.1 CDS tsf NC_009483.1 4374042 4374692 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(4374042..4374692) Geobacter uraniireducens Rf4 5166461 YP_001232459.1 CDS rpsB NC_009483.1 4374804 4375574 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(4374804..4375574) Geobacter uraniireducens Rf4 5163168 YP_001232460.1 CDS Gura_3734 NC_009483.1 4375789 4376958 D PFAM: permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 4375789..4376958 Geobacter uraniireducens Rf4 5163169 YP_001232461.1 CDS Gura_3735 NC_009483.1 4376955 4378034 D PFAM: permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 4376955..4378034 Geobacter uraniireducens Rf4 5163170 YP_001232462.1 CDS Gura_3736 NC_009483.1 4378094 4379023 D hypothetical protein 4378094..4379023 Geobacter uraniireducens Rf4 5165488 YP_001232463.1 CDS Gura_3737 NC_009483.1 4379163 4379579 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(4379163..4379579) Geobacter uraniireducens Rf4 5165489 YP_001232464.1 CDS Gura_3738 NC_009483.1 4379587 4380327 R PFAM: cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis transmembrane protein complement(4379587..4380327) Geobacter uraniireducens Rf4 5165490 YP_001232465.1 CDS Gura_3739 NC_009483.1 4380337 4380849 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen complement(4380337..4380849) Geobacter uraniireducens Rf4 5163706 YP_001232466.1 CDS Gura_3740 NC_009483.1 4380846 4382210 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator complement(4380846..4382210) Geobacter uraniireducens Rf4 5163707 YP_001232467.1 CDS Gura_3741 NC_009483.1 4382280 4383383 R PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase complement(4382280..4383383) Geobacter uraniireducens Rf4 5163708 YP_001232468.1 CDS Gura_3742 NC_009483.1 4383480 4383737 R hypothetical protein complement(4383480..4383737) Geobacter uraniireducens Rf4 5165491 YP_001232469.1 CDS Gura_3743 NC_009483.1 4383888 4384856 R PFAM: Polyprenyl synthetase; polyprenyl synthetase complement(4383888..4384856) Geobacter uraniireducens Rf4 5165492 YP_001232470.1 CDS Gura_3744 NC_009483.1 4385051 4386022 D PFAM: response regulator receiver; GAF domain protein; putative GAF sensor protein 4385051..4386022 Geobacter uraniireducens Rf4 5165493 YP_001232471.1 CDS Gura_3745 NC_009483.1 4386098 4388143 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; diguanylate cyclase complement(4386098..4388143) Geobacter uraniireducens Rf4 5163358 YP_001232472.1 CDS Gura_3746 NC_009483.1 4388531 4389181 D PFAM: helix-turn-helix domain protein; peptidase S24, S26A and S26B; putative prophage repressor 4388531..4389181 Geobacter uraniireducens Rf4 5163359 YP_001232473.1 CDS Gura_3747 NC_009483.1 4389192 4389644 R hypothetical protein complement(4389192..4389644) Geobacter uraniireducens Rf4 5163360 YP_001232474.1 CDS Gura_3748 NC_009483.1 4389676 4390272 R hypothetical protein complement(4389676..4390272) Geobacter uraniireducens Rf4 5163153 YP_001232475.1 CDS Gura_3749 NC_009483.1 4390622 4392154 D Enables the enzymatic reduction of mercuric ions to elemental mercury; mercuric reductase 4390622..4392154 Geobacter uraniireducens Rf4 5163154 YP_001232476.1 CDS Gura_3750 NC_009483.1 4392133 4392852 D hypothetical protein 4392133..4392852 Geobacter uraniireducens Rf4 5163155 YP_001232477.1 CDS Gura_3751 NC_009483.1 4392854 4393867 D PFAM: Radical SAM domain protein; radical SAM domain-containing protein 4392854..4393867 Geobacter uraniireducens Rf4 5163132 YP_001232478.1 CDS pgi NC_009483.1 4393928 4395520 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 4393928..4395520 Geobacter uraniireducens Rf4 5163133 YP_001232479.1 CDS Gura_3753 NC_009483.1 4395547 4396395 R PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase complement(4395547..4396395) Geobacter uraniireducens Rf4 5163134 YP_001232480.1 CDS nadE NC_009483.1 4396515 4397336 R catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(4396515..4397336) Geobacter uraniireducens Rf4 5166664 YP_001232481.1 CDS Gura_3755 NC_009483.1 4397336 4398187 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(4397336..4398187) Geobacter uraniireducens Rf4 5166665 YP_001232482.1 CDS Gura_3756 NC_009483.1 4398315 4398698 R PFAM: protein of unknown function UPF0102; hypothetical protein complement(4398315..4398698) Geobacter uraniireducens Rf4 5166666 YP_001232483.1 CDS rnhB NC_009483.1 4398695 4399345 R RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII complement(4398695..4399345) Geobacter uraniireducens Rf4 5166628 YP_001232484.1 CDS rplS NC_009483.1 4399550 4399906 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(4399550..4399906) Geobacter uraniireducens Rf4 5166629 YP_001232485.1 CDS Gura_3759 NC_009483.1 4400061 4400642 R hypothetical protein complement(4400061..4400642) Geobacter uraniireducens Rf4 5166630 YP_001232486.1 CDS trmD NC_009483.1 4400632 4401375 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(4400632..4401375) Geobacter uraniireducens Rf4 5166226 YP_001232487.1 CDS Gura_3761 NC_009483.1 4401372 4401893 R TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; 16S rRNA processing protein RimM complement(4401372..4401893) Geobacter uraniireducens Rf4 5166227 YP_001232488.1 CDS Gura_3762 NC_009483.1 4401893 4402123 R PFAM: KH, type 1, domain protein; KH domain-containing protein complement(4401893..4402123) Geobacter uraniireducens Rf4 5166228 YP_001232489.1 CDS rpsP NC_009483.1 4402178 4402444 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(4402178..4402444) Geobacter uraniireducens Rf4 5163697 YP_001232490.1 CDS Gura_3764 NC_009483.1 4402495 4403844 R TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle protein complement(4402495..4403844) Geobacter uraniireducens Rf4 5163698 YP_001232491.1 CDS Gura_3765 NC_009483.1 4403986 4404567 R PFAM: SirA family protein; SirA family protein complement(4403986..4404567) Geobacter uraniireducens Rf4 5163699 YP_001232492.1 CDS Gura_3766 NC_009483.1 4404595 4404855 R hypothetical protein complement(4404595..4404855) Geobacter uraniireducens Rf4 5163931 YP_001232493.1 CDS Gura_3767 NC_009483.1 4404981 4405238 D hypothetical protein 4404981..4405238 Geobacter uraniireducens Rf4 5163932 YP_001232494.1 CDS Gura_3768 NC_009483.1 4405252 4405710 D hypothetical protein 4405252..4405710 Geobacter uraniireducens Rf4 5163933 YP_001232495.1 CDS Gura_3770 NC_009483.1 4406542 4406928 R hypothetical protein complement(4406542..4406928) Geobacter uraniireducens Rf4 5164096 YP_001232496.1 CDS Gura_3771 NC_009483.1 4407144 4407860 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(4407144..4407860) Geobacter uraniireducens Rf4 5164097 YP_001232497.1 CDS Gura_3772 NC_009483.1 4407897 4409501 R hypothetical protein complement(4407897..4409501) Geobacter uraniireducens Rf4 5164576 YP_001232498.1 CDS Gura_3774 NC_009483.1 4410225 4410995 R PFAM: putative RNA methylase; methyltransferase small; methyltransferase small complement(4410225..4410995) Geobacter uraniireducens Rf4 5164578 YP_001232499.1 CDS Gura_3775 NC_009483.1 4410992 4413421 R hypothetical protein complement(4410992..4413421) Geobacter uraniireducens Rf4 5165211 YP_001232500.1 CDS Gura_3776 NC_009483.1 4413492 4414607 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(4413492..4414607) Geobacter uraniireducens Rf4 5165212 YP_001232501.1 CDS Gura_3777 NC_009483.1 4414618 4415706 R ADP-heptose--LPS heptosyltransferase-like protein complement(4414618..4415706) Geobacter uraniireducens Rf4 5165213 YP_001232502.1 CDS Gura_3778 NC_009483.1 4415711 4416859 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(4415711..4416859) Geobacter uraniireducens Rf4 5164871 YP_001232503.1 CDS Gura_3779 NC_009483.1 4416896 4417852 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(4416896..4417852) Geobacter uraniireducens Rf4 5164872 YP_001232504.1 CDS Gura_3780 NC_009483.1 4417891 4418886 R PFAM: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(4417891..4418886) Geobacter uraniireducens Rf4 5164873 YP_001232505.1 CDS Gura_3781 NC_009483.1 4418914 4419498 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(4418914..4419498) Geobacter uraniireducens Rf4 5165625 YP_001232506.1 CDS Gura_3782 NC_009483.1 4419970 4421214 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(4419970..4421214) Geobacter uraniireducens Rf4 5165626 YP_001232507.1 CDS Gura_3783 NC_009483.1 4421226 4422401 R hypothetical protein complement(4421226..4422401) Geobacter uraniireducens Rf4 5165627 YP_001232508.1 CDS Gura_3784 NC_009483.1 4422647 4423609 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(4422647..4423609) Geobacter uraniireducens Rf4 5163423 YP_001232509.1 CDS Gura_3785 NC_009483.1 4423690 4425018 R PFAM: polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(4423690..4425018) Geobacter uraniireducens Rf4 5163424 YP_001232510.1 CDS Gura_3786 NC_009483.1 4425002 4426039 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase complement(4425002..4426039) Geobacter uraniireducens Rf4 5163425 YP_001232511.1 CDS Gura_3787 NC_009483.1 4426039 4426935 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase complement(4426039..4426935) Geobacter uraniireducens Rf4 5166109 YP_001232512.1 CDS Gura_3788 NC_009483.1 4426932 4428281 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; DegT/DnrJ/EryC1/StrS aminotransferase complement(4426932..4428281) Geobacter uraniireducens Rf4 5166110 YP_001232513.1 CDS Gura_3789 NC_009483.1 4428326 4429411 R TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; CDP-glucose 4,6-dehydratase complement(4428326..4429411) Geobacter uraniireducens Rf4 5166111 YP_001232514.1 CDS Gura_3790 NC_009483.1 4429489 4430259 R TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate cytidylyltransferase complement(4429489..4430259) Geobacter uraniireducens Rf4 5164818 YP_001232515.1 CDS Gura_3791 NC_009483.1 4430317 4430931 R PFAM: regulatory protein, MarR; regulatory protein MarR complement(4430317..4430931) Geobacter uraniireducens Rf4 5164819 YP_001232516.1 CDS Gura_3792 NC_009483.1 4431016 4431396 R hypothetical protein complement(4431016..4431396) Geobacter uraniireducens Rf4 5164820 YP_001232517.1 CDS Gura_3793 NC_009483.1 4431400 4432113 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(4431400..4432113) Geobacter uraniireducens Rf4 5165359 YP_001232518.1 CDS Gura_3794 NC_009483.1 4432128 4434101 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing protein complement(4432128..4434101) Geobacter uraniireducens Rf4 5165360 YP_001232519.1 CDS Gura_3795 NC_009483.1 4434375 4435388 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(4434375..4435388) Geobacter uraniireducens Rf4 5165361 YP_001232520.1 CDS Gura_3796 NC_009483.1 4435385 4436548 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(4435385..4436548) Geobacter uraniireducens Rf4 5166046 YP_001232521.1 CDS Gura_3797 NC_009483.1 4436545 4437576 R PFAM: glycosyl transferase, family 9; glycosyl transferase family protein complement(4436545..4437576) Geobacter uraniireducens Rf4 5166047 YP_001232522.1 CDS Gura_3798 NC_009483.1 4437596 4438477 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(4437596..4438477) Geobacter uraniireducens Rf4 5166048 YP_001232523.1 CDS Gura_3799 NC_009483.1 4438486 4439646 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(4438486..4439646) Geobacter uraniireducens Rf4 5166158 YP_001232524.1 CDS Gura_3800 NC_009483.1 4439766 4440926 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(4439766..4440926) Geobacter uraniireducens Rf4 5166159 YP_001232525.1 CDS Gura_3801 NC_009483.1 4440923 4441879 R PFAM: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(4440923..4441879) Geobacter uraniireducens Rf4 5166160 YP_001232526.1 CDS Gura_3802 NC_009483.1 4441926 4445972 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(4441926..4445972) Geobacter uraniireducens Rf4 5166591 YP_001232527.1 CDS Gura_3803 NC_009483.1 4446049 4446528 R hypothetical protein complement(4446049..4446528) Geobacter uraniireducens Rf4 5166592 YP_001232528.1 CDS Gura_3804 NC_009483.1 4446679 4448427 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(4446679..4448427) Geobacter uraniireducens Rf4 5166593 YP_001232529.1 CDS Gura_3805 NC_009483.1 4448477 4449385 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(4448477..4449385) Geobacter uraniireducens Rf4 5166025 YP_001232530.1 CDS Gura_3806 NC_009483.1 4449637 4451454 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(4449637..4451454) Geobacter uraniireducens Rf4 5166026 YP_001232531.1 CDS Gura_3807 NC_009483.1 4451703 4452044 R hypothetical protein complement(4451703..4452044) Geobacter uraniireducens Rf4 5166027 YP_001232532.1 CDS Gura_3808 NC_009483.1 4452319 4453653 R PFAM: glycosyl transferase, family 9; glycosyl transferase family protein complement(4452319..4453653) Geobacter uraniireducens Rf4 5165610 YP_001232533.1 CDS Gura_3809 NC_009483.1 4453696 4454760 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(4453696..4454760) Geobacter uraniireducens Rf4 5165611 YP_001232534.1 CDS Gura_3810 NC_009483.1 4454757 4455608 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(4454757..4455608) Geobacter uraniireducens Rf4 5165612 YP_001232535.1 CDS Gura_3811 NC_009483.1 4455610 4456629 R PFAM: Radical SAM domain protein; radical SAM domain-containing protein complement(4455610..4456629) Geobacter uraniireducens Rf4 5166453 YP_001232536.1 CDS Gura_3812 NC_009483.1 4456623 4457357 R PFAM: sulfotransferase; sulfotransferase complement(4456623..4457357) Geobacter uraniireducens Rf4 5166454 YP_001232537.1 CDS Gura_3813 NC_009483.1 4457347 4459482 R PFAM: sulfotransferase; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4457347..4459482) Geobacter uraniireducens Rf4 5166455 YP_001232538.1 CDS Gura_3814 NC_009483.1 4459680 4460009 R hypothetical protein complement(4459680..4460009) Geobacter uraniireducens Rf4 5165571 YP_001232539.1 CDS Gura_3815 NC_009483.1 4459996 4460259 R hypothetical protein complement(4459996..4460259) Geobacter uraniireducens Rf4 5165572 YP_001232540.1 CDS Gura_3816 NC_009483.1 4460405 4460776 R crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown; hypothetical protein complement(4460405..4460776) Geobacter uraniireducens Rf4 5165573 YP_001232541.1 CDS Gura_3817 NC_009483.1 4460895 4461707 R PFAM: ABC-2 type transporter; ABC-2 type transporter complement(4460895..4461707) Geobacter uraniireducens Rf4 5165503 YP_001232542.1 CDS Gura_3818 NC_009483.1 4461942 4462226 R TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; XRE family plasmid maintenance system antidote protein complement(4461942..4462226) Geobacter uraniireducens Rf4 5165504 YP_001232543.1 CDS Gura_3820 NC_009483.1 4462631 4463155 D PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 4462631..4463155 Geobacter uraniireducens Rf4 5166235 YP_001232544.1 CDS Gura_3821 NC_009483.1 4463236 4464192 D PFAM: Integrase, catalytic region; integrase catalytic subunit 4463236..4464192 Geobacter uraniireducens Rf4 5166236 YP_001232545.1 CDS Gura_3822 NC_009483.1 4464541 4465227 R hypothetical protein complement(4464541..4465227) Geobacter uraniireducens Rf4 5166237 YP_001232546.1 CDS Gura_3823 NC_009483.1 4465810 4466091 R hypothetical protein complement(4465810..4466091) Geobacter uraniireducens Rf4 5166381 YP_001232547.1 CDS Gura_3824 NC_009483.1 4466148 4467318 D hypothetical protein join(4466148..4466504,4466503..4467318) Geobacter uraniireducens Rf4 5166382 YP_001232548.1 CDS Gura_3825 NC_009483.1 4467589 4467945 R crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown; hypothetical protein complement(4467589..4467945) Geobacter uraniireducens Rf4 5166383 YP_001232549.1 CDS Gura_3826 NC_009483.1 4468252 4468584 R hypothetical protein complement(4468252..4468584) Geobacter uraniireducens Rf4 5166361 YP_001232550.1 CDS Gura_3827 NC_009483.1 4468581 4468949 R hypothetical protein complement(4468581..4468949) Geobacter uraniireducens Rf4 5166362 YP_001232551.1 CDS Gura_3828 NC_009483.1 4469047 4470894 R TIGRFAM: small GTP-binding protein; sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor, GTP-binding; sulfate adenylyltransferase, large subunit complement(4469047..4470894) Geobacter uraniireducens Rf4 5166363 YP_001232552.1 CDS Gura_3829 NC_009483.1 4470884 4471255 R PFAM: S23 ribosomal protein; S23 ribosomal protein complement(4470884..4471255) Geobacter uraniireducens Rf4 5166373 YP_001232553.1 CDS Gura_3830 NC_009483.1 4471416 4472213 R with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 complement(4471416..4472213) Geobacter uraniireducens Rf4 5166374 YP_001232554.1 CDS Gura_3831 NC_009483.1 4472365 4472991 R PFAM: adenylylsulfate kinase; adenylylsulfate kinase complement(4472365..4472991) Geobacter uraniireducens Rf4 5166375 YP_001232555.1 CDS Gura_3832 NC_009483.1 4473362 4475185 D TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; YVTN beta-propeller repeat-containing protein 4473362..4475185 Geobacter uraniireducens Rf4 5166998 YP_001232556.1 CDS Gura_3833 NC_009483.1 4475587 4476780 R PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase complement(4475587..4476780) Geobacter uraniireducens Rf4 5166999 YP_001232557.1 CDS Gura_3834 NC_009483.1 4476773 4477717 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(4476773..4477717) Geobacter uraniireducens Rf4 5167000 YP_001232558.1 CDS Gura_3835 NC_009483.1 4477741 4478745 R hypothetical protein complement(4477741..4478745) Geobacter uraniireducens Rf4 5166715 YP_001232559.1 CDS Gura_3836 NC_009483.1 4478841 4481057 R hypothetical protein complement(4478841..4481057) Geobacter uraniireducens Rf4 5166716 YP_001232560.1 CDS Gura_3837 NC_009483.1 4481652 4482365 R hypothetical protein complement(4481652..4482365) Geobacter uraniireducens Rf4 5166717 YP_001232561.1 CDS Gura_3838 NC_009483.1 4482590 4483672 R PFAM: NHL repeat containing protein; NHL repeat-containing protein complement(4482590..4483672) Geobacter uraniireducens Rf4 5165994 YP_001232562.1 CDS Gura_3839 NC_009483.1 4483898 4484890 R TIGRFAM: cytochrome C family protein; cytochrome C family protein complement(4483898..4484890) Geobacter uraniireducens Rf4 5165995 YP_001232563.1 CDS Gura_3840 NC_009483.1 4484975 4485970 R TIGRFAM: cytochrome C family protein; cytochrome C family protein complement(4484975..4485970) Geobacter uraniireducens Rf4 5165996 YP_001232564.1 CDS Gura_3841 NC_009483.1 4486068 4486916 R PFAM: cytochrome c assembly protein; cytochrome c assembly protein complement(4486068..4486916) Geobacter uraniireducens Rf4 5167025 YP_001232565.1 CDS Gura_3842 NC_009483.1 4486989 4488350 R PFAM: ResB family protein; ResB family protein complement(4486989..4488350) Geobacter uraniireducens Rf4 5167026 YP_001232566.1 CDS Gura_3843 NC_009483.1 4488533 4488805 R hypothetical protein complement(4488533..4488805) Geobacter uraniireducens Rf4 5167027 YP_001232567.1 CDS Gura_3844 NC_009483.1 4488933 4489439 R TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit complement(4488933..4489439) Geobacter uraniireducens Rf4 5166549 YP_001232568.1 CDS Gura_3845 NC_009483.1 4489495 4490766 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(4489495..4490766) Geobacter uraniireducens Rf4 5166550 YP_001232569.1 CDS Gura_3846 NC_009483.1 4491123 4493984 R TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: APHP domain protein; YVTN beta-propeller repeat-containing protein complement(4491123..4493984) Geobacter uraniireducens Rf4 5166551 YP_001232570.1 CDS purH NC_009483.1 4494327 4495892 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(4494327..4495892) Geobacter uraniireducens Rf4 5166435 YP_001232571.1 CDS Gura_3848 NC_009483.1 4496033 4497316 R hypothetical protein complement(4496033..4497316) Geobacter uraniireducens Rf4 5166436 YP_001232572.1 CDS Gura_3849 NC_009483.1 4497303 4498256 R TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; selenide, water dikinase complement(4497303..4498256) Geobacter uraniireducens Rf4 5166437 YP_001232573.1 CDS Gura_3850 NC_009483.1 4498396 4499550 R TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase complement(4498396..4499550) Geobacter uraniireducens Rf4 5166061 YP_001232574.1 CDS Gura_3851 NC_009483.1 4499863 4501356 D TIGRFAM: thiamine-phosphate pyrophosphorylase; phosphomethylpyrimidine kinase; PFAM: protein of unknown function UPF0031; thiamine monophosphate synthase; Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 4499863..4501356 Geobacter uraniireducens Rf4 5166062 YP_001232575.1 CDS Gura_3852 NC_009483.1 4501462 4502769 D required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 4501462..4502769 Geobacter uraniireducens Rf4 5167007 YP_001232576.1 CDS Gura_3853 NC_009483.1 4503160 4503858 D hypothetical protein 4503160..4503858 Geobacter uraniireducens Rf4 5167009 YP_001232577.1 CDS Gura_3854 NC_009483.1 4503902 4506391 D TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35; glycogen/starch/alpha-glucan phosphorylase 4503902..4506391 Geobacter uraniireducens Rf4 5165194 YP_001232578.1 CDS Gura_3855 NC_009483.1 4506574 4506735 R hypothetical protein complement(4506574..4506735) Geobacter uraniireducens Rf4 5165195 YP_001232579.1 CDS Gura_3856 NC_009483.1 4506786 4507094 R hypothetical protein complement(4506786..4507094) Geobacter uraniireducens Rf4 5165047 YP_001232580.1 CDS Gura_3857 NC_009483.1 4507343 4508479 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; cystathionine gamma-synthase complement(4507343..4508479) Geobacter uraniireducens Rf4 5165048 YP_001232581.1 CDS Gura_3858 NC_009483.1 4508614 4509759 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; cystathionine gamma-synthase complement(4508614..4509759) Geobacter uraniireducens Rf4 5165049 YP_001232582.1 CDS Gura_3859 NC_009483.1 4510081 4511010 R TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; cysteine synthase A complement(4510081..4511010) Geobacter uraniireducens Rf4 5166977 YP_001232583.1 CDS Gura_3860 NC_009483.1 4511246 4512865 R catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase complement(4511246..4512865) Geobacter uraniireducens Rf4 5166978 YP_001232584.1 CDS Gura_3861 NC_009483.1 4512934 4514214 R PFAM: major facilitator superfamily MFS_1; major facilitator transporter complement(4512934..4514214) Geobacter uraniireducens Rf4 5166979 YP_001232585.1 CDS Gura_3862 NC_009483.1 4514839 4515234 D hypothetical protein 4514839..4515234 Geobacter uraniireducens Rf4 5164900 YP_001232586.1 CDS Gura_3863 NC_009483.1 4515374 4515730 R PFAM: PilT protein domain protein; PilT domain-containing protein complement(4515374..4515730) Geobacter uraniireducens Rf4 5164901 YP_001232587.1 CDS Gura_3864 NC_009483.1 4515732 4516031 R hypothetical protein complement(4515732..4516031) Geobacter uraniireducens Rf4 5164902 YP_001232588.1 CDS Gura_3865 NC_009483.1 4516205 4516585 R PFAM: PilT protein domain protein; PilT domain-containing protein complement(4516205..4516585) Geobacter uraniireducens Rf4 5166847 YP_001232589.1 CDS Gura_3866 NC_009483.1 4516586 4516819 R TIGRFAM: prevent-host-death family protein; prevent-host-death family protein complement(4516586..4516819) Geobacter uraniireducens Rf4 5166848 YP_001232590.1 CDS Gura_3867 NC_009483.1 4517119 4517547 D SMART: Nucleotide binding protein, PINc; nucleotide binding protein, PINc 4517119..4517547 Geobacter uraniireducens Rf4 5166849 YP_001232591.1 CDS Gura_3868 NC_009483.1 4517544 4517780 D hypothetical protein 4517544..4517780 Geobacter uraniireducens Rf4 5166932 YP_001232592.1 CDS Gura_3870 NC_009483.1 4518408 4518569 R hypothetical protein complement(4518408..4518569) Geobacter uraniireducens Rf4 5166934 YP_001232593.1 CDS Gura_3871 NC_009483.1 4518627 4518989 R hypothetical protein complement(4518627..4518989) Geobacter uraniireducens Rf4 5165294 YP_001232594.1 CDS Gura_3872 NC_009483.1 4518986 4520743 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4518986..4520743) Geobacter uraniireducens Rf4 5165295 YP_001232595.1 CDS Gura_3873 NC_009483.1 4520740 4522611 R PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4520740..4522611) Geobacter uraniireducens Rf4 5165296 YP_001232596.1 CDS Gura_3874 NC_009483.1 4522644 4523675 R TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; SMART: extracellular solute-binding protein, family 3; aliphatic sulfonate ABC transporter periplasmic ligand-binding protein complement(4522644..4523675) Geobacter uraniireducens Rf4 5166422 YP_001232597.1 CDS Gura_3875 NC_009483.1 4524067 4524936 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(4524067..4524936) Geobacter uraniireducens Rf4 5166423 YP_001232598.1 CDS Gura_3876 NC_009483.1 4525016 4525909 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4525016..4525909) Geobacter uraniireducens Rf4 5166424 YP_001232599.1 CDS Gura_3877 NC_009483.1 4526108 4527295 R PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; 2-hydroxyglutaryl-CoA dehydratase subunit D complement(4526108..4527295) Geobacter uraniireducens Rf4 5166352 YP_001232600.1 CDS Gura_3878 NC_009483.1 4527335 4528753 R PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; 2-hydroxyglutaryl-CoA dehydratase subunit D complement(4527335..4528753) Geobacter uraniireducens Rf4 5166353 YP_001232601.1 CDS Gura_3879 NC_009483.1 4528823 4529632 R TIGRFAM: putative CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; putative CoA-substrate-specific enzyme activase complement(4528823..4529632) Geobacter uraniireducens Rf4 5166354 YP_001232602.1 CDS Gura_3880 NC_009483.1 4529924 4530265 D hypothetical protein 4529924..4530265 Geobacter uraniireducens Rf4 5166917 YP_001232603.1 CDS Gura_3881 NC_009483.1 4530271 4531647 D hypothetical protein 4530271..4531647 Geobacter uraniireducens Rf4 5166918 YP_001232604.1 CDS Gura_3882 NC_009483.1 4531767 4532546 R PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4531767..4532546) Geobacter uraniireducens Rf4 5166919 YP_001232605.1 CDS Gura_3883 NC_009483.1 4532611 4533399 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(4532611..4533399) Geobacter uraniireducens Rf4 5166920 YP_001232606.1 CDS Gura_3884 NC_009483.1 4533533 4534309 R PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(4533533..4534309) Geobacter uraniireducens Rf4 5166921 YP_001232607.1 CDS Gura_3885 NC_009483.1 4534498 4535322 R PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(4534498..4535322) Geobacter uraniireducens Rf4 5166922 YP_001232608.1 CDS Gura_3886 NC_009483.1 4535512 4536636 R nitrate/sulfonate/bicarbonate ABC transporter periplasmic component-like protein complement(4535512..4536636) Geobacter uraniireducens Rf4 5165094 YP_001232609.1 CDS Gura_3887 NC_009483.1 4536667 4538166 R PFAM: phosphate-selective porin O and P; phosphate-selective porin O and P complement(4536667..4538166) Geobacter uraniireducens Rf4 5165095 YP_001232610.1 CDS Gura_3888 NC_009483.1 4538466 4539869 R PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase complement(4538466..4539869) Geobacter uraniireducens Rf4 5165096 YP_001232611.1 CDS Gura_3889 NC_009483.1 4540494 4541360 R PFAM: NifH/frxC-family protein; nitrogenase complement(4540494..4541360) Geobacter uraniireducens Rf4 5165168 YP_001232612.1 CDS Gura_3890 NC_009483.1 4541506 4541673 R hypothetical protein complement(4541506..4541673) Geobacter uraniireducens Rf4 5165169 YP_001232613.1 CDS Gura_3891 NC_009483.1 4541720 4542790 R TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter ATPase complement(4541720..4542790) Geobacter uraniireducens Rf4 5165170 YP_001232614.1 CDS Gura_3892 NC_009483.1 4542818 4543702 R TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease complement(4542818..4543702) Geobacter uraniireducens Rf4 5166298 YP_001232615.1 CDS Gura_3893 NC_009483.1 4543717 4544553 R TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease complement(4543717..4544553) Geobacter uraniireducens Rf4 5166299 YP_001232616.1 CDS Gura_3894 NC_009483.1 4544645 4545658 R TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; sulfate ABC transporter periplasmic sulfate-binding protein complement(4544645..4545658) Geobacter uraniireducens Rf4 5166300 YP_001232617.1 CDS Gura_3895 NC_009483.1 4545731 4546192 R TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator complement(4545731..4546192) Geobacter uraniireducens Rf4 5165628 YP_001232618.1 CDS Gura_3896 NC_009483.1 4546260 4546964 R PFAM: Smr protein/MutS2; Smr protein/MutS2 complement(4546260..4546964) Geobacter uraniireducens Rf4 5165629 YP_001232619.1 CDS Gura_3897 NC_009483.1 4547059 4547922 R PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein complement(4547059..4547922) Geobacter uraniireducens Rf4 5165630 YP_001232620.1 CDS Gura_3898 NC_009483.1 4548131 4550077 D PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; type II secretion system protein E 4548131..4550077 Geobacter uraniireducens Rf4 5166923 YP_001232621.1 CDS Gura_3899 NC_009483.1 4550081 4550929 D PFAM: HDOD; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 4550081..4550929 Geobacter uraniireducens Rf4 5166924 YP_001232622.1 CDS Gura_3900 NC_009483.1 4551042 4551317 R hypothetical protein complement(4551042..4551317) Geobacter uraniireducens Rf4 5166925 YP_001232623.1 CDS Gura_3901 NC_009483.1 4551900 4553042 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase 4551900..4553042 Geobacter uraniireducens Rf4 5167069 YP_001232624.1 CDS Gura_3902 NC_009483.1 4553088 4555766 R TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2; DNA polymerase I complement(4553088..4555766) Geobacter uraniireducens Rf4 5167070 YP_001232625.1 CDS Gura_3903 NC_009483.1 4555763 4555939 R hypothetical protein complement(4555763..4555939) Geobacter uraniireducens Rf4 5167071 YP_001232626.1 CDS Gura_3904 NC_009483.1 4556166 4556339 D hypothetical protein 4556166..4556339 Geobacter uraniireducens Rf4 5166622 YP_001232627.1 CDS Gura_3905 NC_009483.1 4556599 4557042 D PFAM: heat shock protein Hsp20; heat shock protein Hsp20 4556599..4557042 Geobacter uraniireducens Rf4 5166623 YP_001232628.1 CDS Gura_3906 NC_009483.1 4557115 4558005 R PFAM: PP-loop domain protein; PP-loop domain-containing protein complement(4557115..4558005) Geobacter uraniireducens Rf4 5166624 YP_001232629.1 CDS Gura_3907 NC_009483.1 4558023 4558946 R TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; cysteine synthase A complement(4558023..4558946) Geobacter uraniireducens Rf4 5164918 YP_001232630.1 CDS Gura_3908 NC_009483.1 4559043 4559507 R TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator complement(4559043..4559507) Geobacter uraniireducens Rf4 5164919 YP_001232631.1 CDS Gura_3909 NC_009483.1 4559860 4560270 R hypothetical protein complement(4559860..4560270) Geobacter uraniireducens Rf4 5164920 YP_001232632.1 CDS Gura_3910 NC_009483.1 4560379 4560588 R hypothetical protein complement(4560379..4560588) Geobacter uraniireducens Rf4 5165652 YP_001232633.1 CDS dapF NC_009483.1 4560733 4561569 D involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 4560733..4561569 Geobacter uraniireducens Rf4 5165653 YP_001232634.1 CDS Gura_3912 NC_009483.1 4561660 4562088 D PFAM: histidine triad (HIT) protein; histidine triad (HIT) protein 4561660..4562088 Geobacter uraniireducens Rf4 5165654 YP_001232635.1 CDS Gura_3913 NC_009483.1 4562457 4562876 R PFAM: transposase IS200-family protein; transposase IS200-family protein complement(4562457..4562876) Geobacter uraniireducens Rf4 5164306 YP_001232636.1 CDS Gura_3914 NC_009483.1 4563176 4564024 D TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease, family 2; apurinic endonuclease Apn1 4563176..4564024 Geobacter uraniireducens Rf4 5164307 YP_001232637.1 CDS Gura_3915 NC_009483.1 4564317 4564652 D PFAM: protein of unknown function DUF891; hypothetical protein 4564317..4564652 Geobacter uraniireducens Rf4 5164308 YP_001232638.1 CDS Gura_3916 NC_009483.1 4564678 4564998 D putative transcriptional regulator 4564678..4564998 Geobacter uraniireducens Rf4 5167019 YP_001232639.1 CDS Gura_3917 NC_009483.1 4565312 4566526 D PFAM: transposase, mutator type; transposase, mutator type 4565312..4566526 Geobacter uraniireducens Rf4 5167020 YP_001232640.1 CDS Gura_3919 NC_009483.1 4567505 4568809 R PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase complement(4567505..4568809) Geobacter uraniireducens Rf4 5166968 YP_001232641.1 CDS Gura_3920 NC_009483.1 4569564 4570067 D PFAM: Rhodanese domain protein; rhodanese domain-containing protein 4569564..4570067 Geobacter uraniireducens Rf4 5166969 YP_001232642.1 CDS Gura_3921 NC_009483.1 4570064 4570504 D PFAM: DoxX family protein; DoxX family protein 4570064..4570504 Geobacter uraniireducens Rf4 5166970 YP_001232643.1 CDS Gura_3922 NC_009483.1 4570650 4571237 D PFAM: protein of unknown function DUF205; membrane protein 4570650..4571237 Geobacter uraniireducens Rf4 5165232 YP_001232644.1 CDS Gura_3923 NC_009483.1 4571391 4572578 R PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(4571391..4572578) Geobacter uraniireducens Rf4 5165233 YP_001232645.1 CDS Gura_3924 NC_009483.1 4572749 4573924 D PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 4572749..4573924 Geobacter uraniireducens Rf4 5165234 YP_001232646.1 CDS Gura_3925 NC_009483.1 4574440 4574703 D hypothetical protein 4574440..4574703 Geobacter uraniireducens Rf4 5167028 YP_001232647.1 CDS Gura_3926 NC_009483.1 4574757 4575725 D PFAM: protein of unknown function DUF1568; Chromosomal replication initiator, DnaA C-terminal domain; hypothetical protein 4574757..4575725 Geobacter uraniireducens Rf4 5167029 YP_001232648.1 CDS Gura_3927 NC_009483.1 4575972 4576505 D hypothetical protein 4575972..4576505 Geobacter uraniireducens Rf4 5167030 YP_001232649.1 CDS Gura_3928 NC_009483.1 4576502 4577527 D PFAM: Integrase, catalytic region; integrase catalytic subunit 4576502..4577527 Geobacter uraniireducens Rf4 5166875 YP_001232650.1 CDS Gura_3929 NC_009483.1 4578257 4578862 D hypothetical protein 4578257..4578862 Geobacter uraniireducens Rf4 5166876 YP_001232651.1 CDS Gura_3930 NC_009483.1 4578918 4579664 R hypothetical protein complement(4578918..4579664) Geobacter uraniireducens Rf4 5166877 YP_001232652.1 CDS Gura_3932 NC_009483.1 4580189 4580566 D PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 4580189..4580566 Geobacter uraniireducens Rf4 5166939 YP_001232653.1 CDS Gura_3933 NC_009483.1 4580709 4582388 R TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; sulfate adenylyltransferase, large subunit complement(4580709..4582388) Geobacter uraniireducens Rf4 5166940 YP_001232654.1 CDS Gura_3934 NC_009483.1 4582388 4583326 R with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 complement(4582388..4583326) Geobacter uraniireducens Rf4 5165118 YP_001232655.1 CDS Gura_3935 NC_009483.1 4583394 4584089 R TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase; adenylylsulfate reductase complement(4583394..4584089) Geobacter uraniireducens Rf4 5165119 YP_001232656.1 CDS Gura_3936 NC_009483.1 4584371 4585819 R TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; anion transporter complement(4584371..4585819) Geobacter uraniireducens Rf4 5165120 YP_001232657.1 CDS Gura_3937 NC_009483.1 4585819 4586307 R hypothetical protein complement(4585819..4586307) Geobacter uraniireducens Rf4 5165121 YP_001232658.1 CDS Gura_3938 NC_009483.1 4586441 4586860 R PFAM: transposase IS200-family protein; transposase IS200-family protein complement(4586441..4586860) Geobacter uraniireducens Rf4 5165122 YP_001232659.1 CDS Gura_3940 NC_009483.1 4587368 4587592 R redox protein regulator of disulfide bond formation-like protein complement(4587368..4587592) Geobacter uraniireducens Rf4 5165053 YP_001232660.1 CDS Gura_3941 NC_009483.1 4587693 4588640 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; nitrite and sulfite reductase 4Fe-4S region complement(4587693..4588640) Geobacter uraniireducens Rf4 5165054 YP_001232661.1 CDS Gura_3942 NC_009483.1 4588758 4589156 R PFAM: Mov34/MPN/PAD-1 family protein; Mov34/MPN/PAD-1 family protein complement(4588758..4589156) Geobacter uraniireducens Rf4 5165055 YP_001232662.1 CDS Gura_3943 NC_009483.1 4589196 4590008 R PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; UBA/THIF-type NAD/FAD binding protein complement(4589196..4590008) Geobacter uraniireducens Rf4 5166699 YP_001232663.1 CDS Gura_3944 NC_009483.1 4590008 4590223 R TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; thiamine biosynthesis protein ThiS complement(4590008..4590223) Geobacter uraniireducens Rf4 5166700 YP_001232664.1 CDS Gura_3945 NC_009483.1 4590241 4591527 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine aminocarboxypropyltransferase complement(4590241..4591527) Geobacter uraniireducens Rf4 5166701 YP_001232665.1 CDS Gura_3946 NC_009483.1 4592112 4592603 R hypothetical protein complement(4592112..4592603) Geobacter uraniireducens Rf4 5165208 YP_001232666.1 CDS Gura_3947 NC_009483.1 4592608 4593210 R TIGRFAM: membrane lipoprotein lipid attachment site; membrane lipoprotein lipid attachment site complement(4592608..4593210) Geobacter uraniireducens Rf4 5165209 YP_001232667.1 CDS Gura_3948 NC_009483.1 4593239 4593691 R PFAM: protein of unknown function DUF1425; hypothetical protein complement(4593239..4593691) Geobacter uraniireducens Rf4 5165210 YP_001232668.1 CDS Gura_3949 NC_009483.1 4593828 4595291 R PFAM: Tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(4593828..4595291) Geobacter uraniireducens Rf4 5163776 YP_001232669.1 CDS Gura_3950 NC_009483.1 4595376 4596218 R TIGRFAM: RNA polymerase sigma factor RpoH; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma-32 subunit RpoH complement(4595376..4596218) Geobacter uraniireducens Rf4 5163777 YP_001232670.1 CDS Gura_3951 NC_009483.1 4596503 4597576 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 4596503..4597576 Geobacter uraniireducens Rf4 5163778 YP_001232671.1 CDS Gura_3952 NC_009483.1 4597639 4597791 D hypothetical protein 4597639..4597791 Geobacter uraniireducens Rf4 5165739 YP_001232672.1 CDS Gura_3953 NC_009483.1 4597804 4598022 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4597804..4598022 Geobacter uraniireducens Rf4 5165740 YP_001232673.1 CDS Gura_3954 NC_009483.1 4598047 4598355 D hypothetical protein 4598047..4598355 Geobacter uraniireducens Rf4 5165741 YP_001232674.1 CDS Gura_3955 NC_009483.1 4598731 4601325 D PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATPase 4598731..4601325 Geobacter uraniireducens Rf4 5164983 YP_001232675.1 CDS Gura_3956 NC_009483.1 4601562 4601801 R hypothetical protein complement(4601562..4601801) Geobacter uraniireducens Rf4 5164984 YP_001232676.1 CDS Gura_3957 NC_009483.1 4601910 4602179 R hypothetical protein complement(4601910..4602179) Geobacter uraniireducens Rf4 5164985 YP_001232677.1 CDS Gura_3958 NC_009483.1 4602253 4602735 R hypothetical protein complement(4602253..4602735) Geobacter uraniireducens Rf4 5162688 YP_001232678.1 CDS Gura_3959 NC_009483.1 4602964 4603620 D PFAM: ThiJ/PfpI domain protein; isoprenoid biosynthesis protein with amidotransferase-like domain 4602964..4603620 Geobacter uraniireducens Rf4 5162689 YP_001232679.1 CDS Gura_3960 NC_009483.1 4603755 4604384 D hypothetical protein 4603755..4604384 Geobacter uraniireducens Rf4 5162690 YP_001232680.1 CDS Gura_3961 NC_009483.1 4604393 4606093 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(4604393..4606093) Geobacter uraniireducens Rf4 5164544 YP_001232681.1 CDS Gura_3962 NC_009483.1 4606234 4607331 R PFAM: protein of unknown function DUF1016; hypothetical protein complement(4606234..4607331) Geobacter uraniireducens Rf4 5164545 YP_001232682.1 CDS Gura_3965 NC_009483.1 4608085 4608726 R putative transcriptional regulator complement(4608085..4608726) Geobacter uraniireducens Rf4 5163863 YP_001232683.1 CDS Gura_3966 NC_009483.1 4608821 4609138 R hypothetical protein complement(4608821..4609138) Geobacter uraniireducens Rf4 5163864 YP_001232684.1 CDS Gura_3967 NC_009483.1 4609291 4610148 R hypothetical protein complement(4609291..4610148) Geobacter uraniireducens Rf4 5163475 YP_001232685.1 CDS Gura_3968 NC_009483.1 4610598 4611749 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(4610598..4611749) Geobacter uraniireducens Rf4 5163476 YP_001232686.1 CDS Gura_3969 NC_009483.1 4611805 4613040 R PFAM: cell division protein FtsA; cell division protein FtsA complement(4611805..4613040) Geobacter uraniireducens Rf4 5163477 YP_001232687.1 CDS Gura_3970 NC_009483.1 4613100 4613927 R PFAM: Polypeptide-transport-associated protein domain protein, FtsQ-type; polypeptide-transport-associated domain-containing protein complement(4613100..4613927) Geobacter uraniireducens Rf4 5162798 YP_001232688.1 CDS Gura_3971 NC_009483.1 4614030 4614962 R TIGRFAM: D-alanine--D-alanine ligase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase complement(4614030..4614962) Geobacter uraniireducens Rf4 5162799 YP_001232689.1 CDS murB NC_009483.1 4615052 4615954 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(4615052..4615954) Geobacter uraniireducens Rf4 5162800 YP_001232690.1 CDS murC NC_009483.1 4615951 4617327 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(4615951..4617327) Geobacter uraniireducens Rf4 5163096 YP_001232691.1 CDS murG NC_009483.1 4617312 4618409 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(4617312..4618409) Geobacter uraniireducens Rf4 5163097 YP_001232692.1 CDS Gura_3975 NC_009483.1 4618406 4619485 R TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; cell division protein FtsW complement(4618406..4619485) Geobacter uraniireducens Rf4 5163098 YP_001232693.1 CDS Gura_3976 NC_009483.1 4619506 4620867 R TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; UDP-N-acetylmuramoylalanine--D-glutamate ligase complement(4619506..4620867) Geobacter uraniireducens Rf4 5166122 YP_001232694.1 CDS mraY NC_009483.1 4620969 4622045 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(4620969..4622045) Geobacter uraniireducens Rf4 5166123 YP_001232695.1 CDS Gura_3978 NC_009483.1 4622045 4623451 R TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase complement(4622045..4623451) Geobacter uraniireducens Rf4 5166124 YP_001232696.1 CDS murE NC_009483.1 4623481 4625001 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(4623481..4625001) Geobacter uraniireducens Rf4 5165925 YP_001232697.1 CDS Gura_3980 NC_009483.1 4625054 4627027 R PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PASTA domain containing protein; peptidoglycan glycosyltransferase complement(4625054..4627027) Geobacter uraniireducens Rf4 5165926 YP_001232698.1 CDS Gura_3981 NC_009483.1 4627024 4627359 R TIGRFAM: cell division protein FtsL; PFAM: Septum formation initiator; cell division protein FtsL complement(4627024..4627359) Geobacter uraniireducens Rf4 5165927 YP_001232699.1 CDS mraW NC_009483.1 4627379 4628290 R TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; S-adenosyl-methyltransferase MraW complement(4627379..4628290) Geobacter uraniireducens Rf4 5167004 YP_001232700.1 CDS Gura_3983 NC_009483.1 4628318 4628800 R MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ complement(4628318..4628800) Geobacter uraniireducens Rf4 5167005 YP_001232701.1 CDS Gura_3984 NC_009483.1 4629095 4629430 R hypothetical protein complement(4629095..4629430) Geobacter uraniireducens Rf4 5167006 YP_001232702.1 CDS Gura_3985 NC_009483.1 4629479 4630006 R hypothetical protein complement(4629479..4630006) Geobacter uraniireducens Rf4 5164839 YP_001232703.1 CDS Gura_3986 NC_009483.1 4630080 4630790 R PFAM: response regulator receiver; type IV pilus assembly PilZ; response regulator receiver modulated PilZ sensor protein complement(4630080..4630790) Geobacter uraniireducens Rf4 5164840 YP_001232704.1 CDS Gura_3987 NC_009483.1 4631426 4632142 R PFAM: protein of unknown function DUF164; hypothetical protein complement(4631426..4632142) Geobacter uraniireducens Rf4 5164792 YP_001232705.1 CDS Gura_3988 NC_009483.1 4632191 4633309 R PFAM: protein of unknown function DUF34; hypothetical protein complement(4632191..4633309) Geobacter uraniireducens Rf4 5164793 YP_001232706.1 CDS Gura_3989 NC_009483.1 4633635 4641221 R TIGRFAM: conserved repeat domain; PFAM: APHP domain protein; FG-GAP repeat protein; hypothetical protein complement(4633635..4641221) Geobacter uraniireducens Rf4 5164281 YP_001232707.1 CDS Gura_3990 NC_009483.1 4641294 4641839 R PFAM: peptidase M23B; peptidase M23B complement(4641294..4641839) Geobacter uraniireducens Rf4 5163385 YP_001232708.1 CDS Gura_3991 NC_009483.1 4641874 4643013 R hypothetical protein complement(4641874..4643013) Geobacter uraniireducens Rf4 5163386 YP_001232709.1 CDS Gura_3992 NC_009483.1 4643014 4646181 R hypothetical protein complement(4643014..4646181) Geobacter uraniireducens Rf4 5163387 YP_001232710.1 CDS Gura_3993 NC_009483.1 4646750 4647175 D hypothetical protein 4646750..4647175 Geobacter uraniireducens Rf4 5163355 YP_001232711.1 CDS Gura_3994 NC_009483.1 4647198 4648325 R PFAM: putative RNA methylase; THUMP domain protein; putative RNA methylase complement(4647198..4648325) Geobacter uraniireducens Rf4 5163356 YP_001232712.1 CDS Gura_3995 NC_009483.1 4648727 4649059 R hypothetical protein complement(4648727..4649059) Geobacter uraniireducens Rf4 5163357 YP_001232713.1 CDS Gura_3996 NC_009483.1 4649062 4649832 R hypothetical protein complement(4649062..4649832) Geobacter uraniireducens Rf4 5166992 YP_001232714.1 CDS Gura_3997 NC_009483.1 4649811 4650608 R hypothetical protein complement(4649811..4650608) Geobacter uraniireducens Rf4 5166993 YP_001232715.1 CDS sucC NC_009483.1 4650861 4652024 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 4650861..4652024 Geobacter uraniireducens Rf4 5166994 YP_001232716.1 CDS Gura_3999 NC_009483.1 4652231 4653124 D TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit alpha 4652231..4653124 Geobacter uraniireducens Rf4 5166088 YP_001232717.1 CDS Gura_4000 NC_009483.1 4653135 4654442 R PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; nitrite and sulfite reductase 4Fe-4S region complement(4653135..4654442) Geobacter uraniireducens Rf4 5166089 YP_001232718.1 CDS Gura_4001 NC_009483.1 4654596 4654928 D hypothetical protein 4654596..4654928 Geobacter uraniireducens Rf4 5166090 YP_001232719.1 CDS Gura_4002 NC_009483.1 4654925 4655302 D hypothetical protein 4654925..4655302 Geobacter uraniireducens Rf4 5164705 YP_001232720.1 CDS Gura_4003 NC_009483.1 4655408 4655944 R hypothetical protein complement(4655408..4655944) Geobacter uraniireducens Rf4 5164706 YP_001232721.1 CDS Gura_4004 NC_009483.1 4656597 4658207 D formate-dependent nitrite reductase periplasmic cytochrome c552 subunit-like protein 4656597..4658207 Geobacter uraniireducens Rf4 5164707 YP_001232722.1 CDS Gura_4005 NC_009483.1 4658396 4659712 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor 4658396..4659712 Geobacter uraniireducens Rf4 5164051 YP_001232723.1 CDS Gura_4006 NC_009483.1 4659934 4660335 R hypothetical protein complement(4659934..4660335) Geobacter uraniireducens Rf4 5164052 YP_001232724.1 CDS Gura_4007 NC_009483.1 4660335 4661084 R DNA uptake lipoprotein-like protein complement(4660335..4661084) Geobacter uraniireducens Rf4 5164053 YP_001232725.1 CDS Gura_4008 NC_009483.1 4661256 4663055 R TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; GTP-binding protein TypA complement(4661256..4663055) Geobacter uraniireducens Rf4 5166953 YP_001232726.1 CDS Gura_4009 NC_009483.1 4663192 4663917 R hypothetical protein complement(4663192..4663917) Geobacter uraniireducens Rf4 5166954 YP_001232727.1 CDS Gura_4010 NC_009483.1 4664010 4665533 R PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase, catalytic; lytic transglycosylase complement(4664010..4665533) Geobacter uraniireducens Rf4 5166955 YP_001232728.1 CDS Gura_4011 NC_009483.1 4666133 4667260 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF362; hypothetical protein complement(4666133..4667260) Geobacter uraniireducens Rf4 5164410 YP_001232729.1 CDS Gura_4012 NC_009483.1 4667330 4668214 D TIGRFAM: tyrosine recombinase XerC; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; tyrosine recombinase XerC 4667330..4668214 Geobacter uraniireducens Rf4 5164411 YP_001232730.1 CDS Gura_4013 NC_009483.1 4668300 4668731 D hypothetical protein 4668300..4668731 Geobacter uraniireducens Rf4 5164412 YP_001232731.1 CDS Gura_4014 NC_009483.1 4668813 4669271 D PFAM: protein of unknown function DUF188; hypothetical protein 4668813..4669271 Geobacter uraniireducens Rf4 5163871 YP_001232732.1 CDS Gura_4015 NC_009483.1 4669359 4669904 D PFAM: YaeQ family protein; YaeQ family protein 4669359..4669904 Geobacter uraniireducens Rf4 5163872 YP_001232733.1 CDS Gura_4016 NC_009483.1 4670033 4670236 D hypothetical protein 4670033..4670236 Geobacter uraniireducens Rf4 5163873 YP_001232734.1 CDS Gura_4017 NC_009483.1 4670282 4670680 D PFAM: CoA-binding domain protein; CoA-binding domain-containing protein 4670282..4670680 Geobacter uraniireducens Rf4 5166637 YP_001232735.1 CDS Gura_4018 NC_009483.1 4670705 4672846 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; methyl-accepting chemotaxis sensory transducer complement(4670705..4672846) Geobacter uraniireducens Rf4 5166638 YP_001232736.1 CDS Gura_4019 NC_009483.1 4673132 4673332 D PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 4673132..4673332 Geobacter uraniireducens Rf4 5166639 YP_001232737.1 CDS Gura_4020 NC_009483.1 4673650 4673850 R PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein complement(4673650..4673850) Geobacter uraniireducens Rf4 5167043 YP_001232738.1 CDS Gura_4021 NC_009483.1 4673961 4674791 R hypothetical protein complement(4673961..4674791) Geobacter uraniireducens Rf4 5167044 YP_001232739.1 CDS Gura_4022 NC_009483.1 4674992 4675246 R hypothetical protein complement(4674992..4675246) Geobacter uraniireducens Rf4 5167045 YP_001232740.1 CDS Gura_4023 NC_009483.1 4675496 4676095 D hypothetical protein 4675496..4676095 Geobacter uraniireducens Rf4 5163508 YP_001232741.1 CDS Gura_4024 NC_009483.1 4676319 4676675 D hypothetical protein 4676319..4676675 Geobacter uraniireducens Rf4 5163509 YP_001232742.1 CDS Gura_4025 NC_009483.1 4676738 4678369 R PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4676738..4678369) Geobacter uraniireducens Rf4 5163510 YP_001232743.1 CDS Gura_4026 NC_009483.1 4678548 4679186 R PFAM: outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp complement(4678548..4679186) Geobacter uraniireducens Rf4 5163259 YP_001232744.1 CDS Gura_4027 NC_009483.1 4679359 4680399 D PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; response regulator receiver modulated metal dependent phosphohydrolase 4679359..4680399 Geobacter uraniireducens Rf4 5163260 YP_001232745.1 CDS Gura_4028 NC_009483.1 4680584 4681675 R phosphotransacetylase domain-containing protein complement(4680584..4681675) Geobacter uraniireducens Rf4 5163261 YP_001232746.1 CDS Gura_4029 NC_009483.1 4681938 4683533 R PFAM: acetyl-CoA hydrolase/transferase; acetyl-CoA hydrolase complement(4681938..4683533) Geobacter uraniireducens Rf4 5166841 YP_001232747.1 CDS Gura_4030 NC_009483.1 4684146 4684796 D PFAM: response regulator receiver; histidine kinase A domain protein; response regulator receiver protein 4684146..4684796 Geobacter uraniireducens Rf4 5166842 YP_001232748.1 CDS Gura_4031 NC_009483.1 4684864 4686393 R TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI complement(4684864..4686393) Geobacter uraniireducens Rf4 5166843 YP_001232749.1 CDS Gura_4032 NC_009483.1 4686443 4687393 R TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase complement(4686443..4687393) Geobacter uraniireducens Rf4 5163808 YP_001232750.1 CDS Gura_4033 NC_009483.1 4687545 4688297 D hypothetical protein 4687545..4688297 Geobacter uraniireducens Rf4 5163809 YP_001232751.1 CDS Gura_4034 NC_009483.1 4688361 4689341 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter 4688361..4689341 Geobacter uraniireducens Rf4 5163810 YP_001232752.1 CDS Gura_4035 NC_009483.1 4689369 4690577 D catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase 4689369..4690577 Geobacter uraniireducens Rf4 5166250 YP_001232753.1 CDS Gura_4036 NC_009483.1 4691017 4691721 R PFAM: protein of unknown function DUF45; hypothetical protein complement(4691017..4691721) Geobacter uraniireducens Rf4 5166251 YP_001232754.1 CDS Gura_4037 NC_009483.1 4691718 4694972 R TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; HsdR family type I site-specific deoxyribonuclease complement(4691718..4694972) Geobacter uraniireducens Rf4 5166252 YP_001232755.1 CDS Gura_4038 NC_009483.1 4695001 4695507 R hypothetical protein complement(4695001..4695507) Geobacter uraniireducens Rf4 5164070 YP_001232756.1 CDS Gura_4039 NC_009483.1 4695504 4696574 R PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; helix-turn-helix domain-containing protein complement(4695504..4696574) Geobacter uraniireducens Rf4 5164071 YP_001232757.1 CDS Gura_4040 NC_009483.1 4696924 4698345 R hypothetical protein complement(4696924..4698345) Geobacter uraniireducens Rf4 5164072 YP_001232758.1 CDS Gura_4041 NC_009483.1 4698342 4700081 R hypothetical protein complement(4698342..4700081) Geobacter uraniireducens Rf4 5165928 YP_001232759.1 CDS Gura_4042 NC_009483.1 4700105 4701391 R PFAM: restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit complement(4700105..4701391) Geobacter uraniireducens Rf4 5165929 YP_001232760.1 CDS Gura_4043 NC_009483.1 4701384 4703858 R PFAM: N-6 DNA methylase; N-6 DNA methylase complement(4701384..4703858) Geobacter uraniireducens Rf4 5165930 YP_001232761.1 CDS Gura_4044 NC_009483.1 4704003 4704686 R hypothetical protein complement(4704003..4704686) Geobacter uraniireducens Rf4 5166194 YP_001232762.1 CDS Gura_4045 NC_009483.1 4704723 4705580 R similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; putative GTP cyclohydrolase complement(4704723..4705580) Geobacter uraniireducens Rf4 5166195 YP_001232763.1 CDS Gura_4046 NC_009483.1 4705592 4706278 R TIGRFAM: exsB protein; PFAM: ExsB family protein; exsB protein complement(4705592..4706278) Geobacter uraniireducens Rf4 5166196 YP_001232764.1 CDS Gura_4047 NC_009483.1 4706383 4708143 R TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor RpoD domain protein; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; RpoD family RNA polymerase sigma factor complement(4706383..4708143) Geobacter uraniireducens Rf4 5166826 YP_001232765.1 CDS Gura_4048 NC_009483.1 4708171 4709934 R TIGRFAM: DNA primase; PFAM: zinc finger, CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core, N-terminal domain; SMART: Toprim sub domain protein; DNA primase complement(4708171..4709934) Geobacter uraniireducens Rf4 5166827 YP_001232766.1 CDS Gura_4049 NC_009483.1 4709960 4710469 R PFAM: Colicin V production protein; colicin V production protein complement(4709960..4710469) Geobacter uraniireducens Rf4 5166828 YP_001232767.1 CDS Gura_4050 NC_009483.1 4710581 4711024 R PFAM: GatB/Yqey domain protein; GatB/Yqey domain-containing protein complement(4710581..4711024) Geobacter uraniireducens Rf4 5162760 YP_001232768.1 CDS rpsU NC_009483.1 4711035 4711232 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(4711035..4711232) Geobacter uraniireducens Rf4 5162761 YP_001232769.1 CDS hisE NC_009483.1 4711369 4711692 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase complement(4711369..4711692) Geobacter uraniireducens Rf4 5162762 YP_001232770.1 CDS Gura_4053 NC_009483.1 4711792 4712553 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(4711792..4712553) Geobacter uraniireducens Rf4 5163003 YP_001232771.1 CDS Gura_4054 NC_009483.1 4712594 4713331 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(4712594..4713331) Geobacter uraniireducens Rf4 5163004 YP_001232772.1 CDS hisH NC_009483.1 4713400 4714026 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(4713400..4714026) Geobacter uraniireducens Rf4 5163005 YP_001232773.1 CDS hisB NC_009483.1 4714061 4714648 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(4714061..4714648) Geobacter uraniireducens Rf4 5165554 YP_001232774.1 CDS hisD NC_009483.1 4714664 4715953 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(4714664..4715953) Geobacter uraniireducens Rf4 5165555 YP_001232775.1 CDS hisG NC_009483.1 4716033 4716737 R short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit complement(4716033..4716737) Geobacter uraniireducens Rf4 5165556 YP_001232776.1 CDS Gura_4059 NC_009483.1 4716758 4718011 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(4716758..4718011) Geobacter uraniireducens Rf4 5164741 YP_001232777.1 CDS Gura_4060 NC_009483.1 4718095 4718949 R TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; Methyltransferase type 12; HemK family modification methylase complement(4718095..4718949) Geobacter uraniireducens Rf4 5164742 YP_001232778.1 CDS prfA NC_009483.1 4719005 4720072 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(4719005..4720072) Geobacter uraniireducens Rf4 5164743 YP_001232779.1 CDS Gura_4062 NC_009483.1 4720168 4721082 R PFAM: protein of unknown function DUF1385; hypothetical protein complement(4720168..4721082) Geobacter uraniireducens Rf4 5165438 YP_001232780.1 CDS thyX NC_009483.1 4721128 4721817 R flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase complement(4721128..4721817) Geobacter uraniireducens Rf4 5165439 YP_001232781.1 CDS rpmE NC_009483.1 4722053 4722250 R RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(4722053..4722250) Geobacter uraniireducens Rf4 5165440 YP_001232782.1 CDS rho NC_009483.1 4722351 4723598 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(4722351..4723598) Geobacter uraniireducens Rf4 5165085 YP_001232783.1 CDS Gura_4066 NC_009483.1 4723992 4726001 D PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase (quinone) 4723992..4726001 Geobacter uraniireducens Rf4 5165086 YP_001232784.1 CDS Gura_4067 NC_009483.1 4725981 4726364 R PFAM: Class I peptide chain release factor; class I peptide chain release factor complement(4725981..4726364) Geobacter uraniireducens Rf4 5165087 YP_001232785.1 CDS Gura_4069 NC_009483.1 4726989 4728401 D cytochrome c peroxidase-like protein 4726989..4728401 Geobacter uraniireducens Rf4 5163010 YP_001232786.1 CDS Gura_4070 NC_009483.1 4728503 4728940 R PFAM: protein of unknown function DUF606; hypothetical protein complement(4728503..4728940) Geobacter uraniireducens Rf4 5163011 YP_001232787.1 CDS Gura_4071 NC_009483.1 4729124 4729792 R hypothetical protein complement(4729124..4729792) Geobacter uraniireducens Rf4 5162994 YP_001232788.1 CDS Gura_4072 NC_009483.1 4729886 4730365 R hypothetical protein complement(4729886..4730365) Geobacter uraniireducens Rf4 5162995 YP_001232789.1 CDS Gura_4073 NC_009483.1 4730401 4730934 R TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase complement(4730401..4730934) Geobacter uraniireducens Rf4 5162996 YP_001232790.1 CDS Gura_4074 NC_009483.1 4731292 4731807 R hypothetical protein complement(4731292..4731807) Geobacter uraniireducens Rf4 5164434 YP_001232791.1 CDS Gura_4075 NC_009483.1 4732039 4732410 D hypothetical protein 4732039..4732410 Geobacter uraniireducens Rf4 5164435 YP_001232792.1 CDS Gura_4076 NC_009483.1 4732465 4733343 R PFAM: Peptidoglycan-binding LysM; ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(4732465..4733343) Geobacter uraniireducens Rf4 5164436 YP_001232793.1 CDS Gura_4077 NC_009483.1 4733443 4734114 D PFAM: O-methyltransferase, family 3; O-methyltransferase family protein 4733443..4734114 Geobacter uraniireducens Rf4 5162870 YP_001232794.1 CDS Gura_4078 NC_009483.1 4734421 4734678 D PFAM: flagellar FlbD family protein; flagellar FlbD family protein 4734421..4734678 Geobacter uraniireducens Rf4 5162871 YP_001232795.1 CDS Gura_4079 NC_009483.1 4734713 4735483 D PFAM: MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 4734713..4735483 Geobacter uraniireducens Rf4 5162872 YP_001232796.1 CDS Gura_4080 NC_009483.1 4735484 4736260 D PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein 4735484..4736260 Geobacter uraniireducens Rf4 5163955 YP_001232797.1 CDS Gura_4081 NC_009483.1 4736485 4737699 R PFAM: transposase, mutator type; transposase, mutator type complement(4736485..4737699) Geobacter uraniireducens Rf4 5163956 YP_001232798.1 CDS Gura_4082 NC_009483.1 4737940 4738734 R PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ complement(4737940..4738734) Geobacter uraniireducens Rf4 5163957 YP_001232799.1 CDS Gura_4083 NC_009483.1 4739157 4740167 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; NAD-dependent epimerase/dehydratase 4739157..4740167 Geobacter uraniireducens Rf4 5166974 YP_001232800.1 CDS Gura_4084 NC_009483.1 4740164 4741342 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; DegT/DnrJ/EryC1/StrS aminotransferase 4740164..4741342 Geobacter uraniireducens Rf4 5166975 YP_001232801.1 CDS Gura_4085 NC_009483.1 4741335 4742492 D PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 4741335..4742492 Geobacter uraniireducens Rf4 5166976 YP_001232802.1 CDS Gura_4086 NC_009483.1 4742497 4743588 D PFAM: N-acetylneuraminic acid synthase, N-terminal domain; N-acetylneuraminate synthase 4742497..4743588 Geobacter uraniireducens Rf4 5164891 YP_001232803.1 CDS Gura_4087 NC_009483.1 4743585 4744223 D carbonic anhydrase 4743585..4744223 Geobacter uraniireducens Rf4 5164892 YP_001232804.1 CDS Gura_4088 NC_009483.1 4744220 4745275 D PFAM: CBS domain containing protein; Nucleotidyl transferase; nucleotidyl transferase 4744220..4745275 Geobacter uraniireducens Rf4 5164893 YP_001232805.1 CDS Gura_4089 NC_009483.1 4745265 4745954 D PFAM: acylneuraminate cytidylyltransferase; acylneuraminate cytidylyltransferase 4745265..4745954 Geobacter uraniireducens Rf4 5163268 YP_001232806.1 CDS Gura_4090 NC_009483.1 4745980 4747368 D PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 4745980..4747368 Geobacter uraniireducens Rf4 5163269 YP_001232807.1 CDS Gura_4091 NC_009483.1 4747390 4749915 D PFAM: protein of unknown function DUF115; hypothetical protein 4747390..4749915 Geobacter uraniireducens Rf4 5163270 YP_001232808.1 CDS Gura_4092 NC_009483.1 4750337 4750762 R hypothetical protein complement(4750337..4750762) Geobacter uraniireducens Rf4 5165531 YP_001232809.1 CDS Gura_4093 NC_009483.1 4750767 4751186 R PFAM: flagellar protein FliS; flagellar protein FliS complement(4750767..4751186) Geobacter uraniireducens Rf4 5165532 YP_001232810.1 CDS Gura_4094 NC_009483.1 4751273 4752694 R PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; flagellar hook-associated 2 domain-containing protein complement(4751273..4752694) Geobacter uraniireducens Rf4 5165533 YP_001232811.1 CDS Gura_4095 NC_009483.1 4752905 4753735 R PFAM: flagellin domain protein; flagellin domain-containing protein complement(4752905..4753735) Geobacter uraniireducens Rf4 5162846 YP_001232812.1 CDS Gura_4096 NC_009483.1 4754017 4754508 R binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW complement(4754017..4754508) Geobacter uraniireducens Rf4 5162847 YP_001232813.1 CDS Gura_4097 NC_009483.1 4754514 4754753 R PFAM: carbon storage regulator; carbon storage regulator CsrA complement(4754514..4754753) Geobacter uraniireducens Rf4 5162848 YP_001232814.1 CDS Gura_4098 NC_009483.1 4754786 4755682 R TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; flagellar hook-associated protein 3 complement(4754786..4755682) Geobacter uraniireducens Rf4 5164390 YP_001232815.1 CDS Gura_4099 NC_009483.1 4755732 4757168 R TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar hook-associated protein FlgK complement(4755732..4757168) Geobacter uraniireducens Rf4 5164391 YP_001232816.1 CDS Gura_4100 NC_009483.1 4757170 4757667 R hypothetical protein complement(4757170..4757667) Geobacter uraniireducens Rf4 5164392 YP_001232817.1 CDS Gura_4101 NC_009483.1 4757681 4757974 R hypothetical protein complement(4757681..4757974) Geobacter uraniireducens Rf4 5163599 YP_001232818.1 CDS Gura_4102 NC_009483.1 4758005 4758367 R rod binding protein-like protein complement(4758005..4758367) Geobacter uraniireducens Rf4 5163600 YP_001232819.1 CDS flgI NC_009483.1 4758466 4759572 R part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein complement(4758466..4759572) Geobacter uraniireducens Rf4 5163601 YP_001232820.1 CDS Gura_4104 NC_009483.1 4759658 4760347 R PFAM: flagellar L-ring protein; flagellar L-ring protein complement(4759658..4760347) Geobacter uraniireducens Rf4 5163052 YP_001232821.1 CDS Gura_4105 NC_009483.1 4760357 4761073 R PFAM: SAF domain; SAF domain-containing protein complement(4760357..4761073) Geobacter uraniireducens Rf4 5163053 YP_001232822.1 CDS flgG NC_009483.1 4761099 4761887 R makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG complement(4761099..4761887) Geobacter uraniireducens Rf4 5163054 YP_001232823.1 CDS Gura_4107 NC_009483.1 4762039 4762773 R PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body rod protein complement(4762039..4762773) Geobacter uraniireducens Rf4 5166625 YP_001232824.1 CDS Gura_4108 NC_009483.1 4762808 4763563 R TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; RNA polymerase sigma-28 subunit FliA/WhiG complement(4762808..4763563) Geobacter uraniireducens Rf4 5166626 YP_001232825.1 CDS Gura_4109 NC_009483.1 4763560 4764492 R PFAM: Cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase complement(4763560..4764492) Geobacter uraniireducens Rf4 5166627 YP_001232826.1 CDS Gura_4110 NC_009483.1 4764489 4765832 R PFAM: GTP-binding signal recognition particle SRP54, G- domain; SMART: AAA ATPase; GTP-binding signal recognition particle complement(4764489..4765832) Geobacter uraniireducens Rf4 5162873 YP_001232827.1 CDS flhA NC_009483.1 4765822 4767906 R membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA complement(4765822..4767906) Geobacter uraniireducens Rf4 5162874 YP_001232828.1 CDS Gura_4112 NC_009483.1 4768241 4769485 D PFAM: surface antigen (D15); surface antigen (D15) 4768241..4769485 Geobacter uraniireducens Rf4 5162875 YP_001232829.1 CDS Gura_4113 NC_009483.1 4769736 4771109 D PFAM: AAA-4 family protein; putative transcriptional regulator 4769736..4771109 Geobacter uraniireducens Rf4 5163779 YP_001232830.1 CDS Gura_4114 NC_009483.1 4771301 4771861 D hypothetical protein 4771301..4771861 Geobacter uraniireducens Rf4 5163780 YP_001232831.1 CDS Gura_4115 NC_009483.1 4771902 4773143 D PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 4771902..4773143 Geobacter uraniireducens Rf4 5163781 YP_001232832.1 CDS Gura_4116 NC_009483.1 4773140 4774504 D hypothetical protein 4773140..4774504 Geobacter uraniireducens Rf4 5164046 YP_001232833.1 CDS Gura_4117 NC_009483.1 4774561 4776918 D hypothetical protein 4774561..4776918 Geobacter uraniireducens Rf4 5164047 YP_001232834.1 CDS Gura_4118 NC_009483.1 4777109 4777486 D PFAM: protein of unknown function DUF559; hypothetical protein 4777109..4777486 Geobacter uraniireducens Rf4 5164048 YP_001232835.1 CDS Gura_4119 NC_009483.1 4777717 4778634 R TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; putative radical SAM protein complement(4777717..4778634) Geobacter uraniireducens Rf4 5162679 YP_001232836.1 CDS Gura_4120 NC_009483.1 4778631 4779548 R PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator complement(4778631..4779548) Geobacter uraniireducens Rf4 5162680 YP_001232837.1 CDS Gura_4121 NC_009483.1 4779732 4780004 D hypothetical protein 4779732..4780004 Geobacter uraniireducens Rf4 5162681 YP_001232838.1 CDS Gura_4122 NC_009483.1 4780136 4782667 D SMART: helicase c2; helicase c2 4780136..4782667 Geobacter uraniireducens Rf4 5166456 YP_001232839.1 CDS Gura_4123 NC_009483.1 4782633 4783088 R hypothetical protein complement(4782633..4783088) Geobacter uraniireducens Rf4 5166457 YP_001232840.1 CDS Gura_4124 NC_009483.1 4783259 4783528 R hypothetical protein complement(4783259..4783528) Geobacter uraniireducens Rf4 5166458 YP_001232841.1 CDS Gura_4125 NC_009483.1 4783624 4784340 R amidophosphoribosyltransferase-like protein complement(4783624..4784340) Geobacter uraniireducens Rf4 5166259 YP_001232842.1 CDS Gura_4126 NC_009483.1 4784343 4784996 R PFAM: protein of unknown function DUF1121; hypothetical protein complement(4784343..4784996) Geobacter uraniireducens Rf4 5166260 YP_001232843.1 CDS Gura_4127 NC_009483.1 4785051 4786589 R catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase complement(4785051..4786589) Geobacter uraniireducens Rf4 5166261 YP_001232844.1 CDS Gura_4128 NC_009483.1 4786690 4787151 R PFAM: protein of unknown function DUF163; hypothetical protein complement(4786690..4787151) Geobacter uraniireducens Rf4 5163523 YP_001232845.1 CDS Gura_4129 NC_009483.1 4787148 4787534 R TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; iojap family protein complement(4787148..4787534) Geobacter uraniireducens Rf4 5163524 YP_001232846.1 CDS Gura_4130 NC_009483.1 4787524 4788174 R TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase complement(4787524..4788174) Geobacter uraniireducens Rf4 5163525 YP_001232847.1 CDS proA NC_009483.1 4788206 4789462 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(4788206..4789462) Geobacter uraniireducens Rf4 5166658 YP_001232848.1 CDS Gura_4132 NC_009483.1 4789716 4790888 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(4789716..4790888) Geobacter uraniireducens Rf4 5166659 YP_001232849.1 CDS Gura_4133 NC_009483.1 4790981 4791463 D hypothetical protein 4790981..4791463 Geobacter uraniireducens Rf4 5166660 YP_001232850.1 CDS Gura_4134 NC_009483.1 4791825 4793066 D PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 4791825..4793066 Geobacter uraniireducens Rf4 5162739 YP_001232851.1 CDS Gura_4135 NC_009483.1 4793083 4794084 R PFAM: phosphate transporter; phosphate transporter complement(4793083..4794084) Geobacter uraniireducens Rf4 5162740 YP_001232852.1 CDS Gura_4136 NC_009483.1 4794077 4794694 R PFAM: protein of unknown function DUF47; hypothetical protein complement(4794077..4794694) Geobacter uraniireducens Rf4 5162741 YP_001232853.1 CDS Gura_4137 NC_009483.1 4795133 4795945 D TIGRFAM: putative undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; putative undecaprenol kinase 4795133..4795945 Geobacter uraniireducens Rf4 5164288 YP_001232854.1 CDS radC NC_009483.1 4795989 4796675 D Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 4795989..4796675 Geobacter uraniireducens Rf4 5164289 YP_001232855.1 CDS Gura_4139 NC_009483.1 4796838 4798241 R PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase complement(4796838..4798241) Geobacter uraniireducens Rf4 5164290 YP_001232856.1 CDS Gura_4140 NC_009483.1 4798752 4799045 R hypothetical protein complement(4798752..4799045) Geobacter uraniireducens Rf4 5165872 YP_001232857.1 CDS Gura_4141 NC_009483.1 4799183 4800043 R PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Serine-type D-Ala-D-Ala carboxypeptidase complement(4799183..4800043) Geobacter uraniireducens Rf4 5165873 YP_001232858.1 CDS Gura_4142 NC_009483.1 4800690 4801994 D PFAM: protein of unknown function DUF898, transmembrane; hypothetical protein 4800690..4801994 Geobacter uraniireducens Rf4 5165874 YP_001232859.1 CDS Gura_4143 NC_009483.1 4801991 4803034 D PFAM: peptidase M48, Ste24p; peptidase M48, Ste24p 4801991..4803034 Geobacter uraniireducens Rf4 5165718 YP_001232860.1 CDS Gura_4144 NC_009483.1 4803123 4804412 D SMART: AAA ATPase; ATPase AAA 4803123..4804412 Geobacter uraniireducens Rf4 5165719 YP_001232861.1 CDS Gura_4145 NC_009483.1 4804752 4805063 D hypothetical protein 4804752..4805063 Geobacter uraniireducens Rf4 5165720 YP_001232862.1 CDS Gura_4146 NC_009483.1 4805149 4806435 D transposase 4805149..4806435 Geobacter uraniireducens Rf4 5164702 YP_001232863.1 CDS Gura_4147 NC_009483.1 4807170 4807847 D PFAM: protein of unknown function DUF1526; hypothetical protein 4807170..4807847 Geobacter uraniireducens Rf4 5164703 YP_001232864.1 CDS Gura_4148 NC_009483.1 4808220 4809299 D PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 4808220..4809299 Geobacter uraniireducens Rf4 5164704 YP_001232865.1 CDS Gura_4149 NC_009483.1 4809661 4809927 D hypothetical protein 4809661..4809927 Geobacter uraniireducens Rf4 5164136 YP_001232866.1 CDS Gura_4150 NC_009483.1 4809955 4810617 D hypothetical protein 4809955..4810617 Geobacter uraniireducens Rf4 5164137 YP_001232867.1 CDS Gura_4151 NC_009483.1 4810854 4812158 R PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase complement(4810854..4812158) Geobacter uraniireducens Rf4 5164138 YP_001232868.1 CDS Gura_4152 NC_009483.1 4812895 4813239 D PFAM: histidine triad (HIT) protein; histidine triad (HIT) protein 4812895..4813239 Geobacter uraniireducens Rf4 5164151 YP_001232869.1 CDS Gura_4153 NC_009483.1 4813607 4814113 D PFAM: Rubrerythrin; rubrerythrin 4813607..4814113 Geobacter uraniireducens Rf4 5164152 YP_001232870.1 CDS Gura_4154 NC_009483.1 4814136 4815134 D PFAM: O-methyltransferase, family 2; Methyltransferase type 12; O-methyltransferase family protein 4814136..4815134 Geobacter uraniireducens Rf4 5164153 YP_001232871.1 CDS Gura_4155 NC_009483.1 4815312 4815572 D hypothetical protein 4815312..4815572 Geobacter uraniireducens Rf4 5166307 YP_001232872.1 CDS Gura_4156 NC_009483.1 4815844 4816149 D hypothetical protein 4815844..4816149 Geobacter uraniireducens Rf4 5166308 YP_001232873.1 CDS Gura_4157 NC_009483.1 4816343 4817989 D catalyzes the hydrolysis of pyrophosphate to phosphate; putative manganese-dependent inorganic pyrophosphatase 4816343..4817989 Geobacter uraniireducens Rf4 5166309 YP_001232874.1 CDS Gura_4158 NC_009483.1 4818044 4818526 R PFAM: CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase complement(4818044..4818526) Geobacter uraniireducens Rf4 5166256 YP_001232875.1 CDS Gura_4159 NC_009483.1 4818631 4819404 R PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(4818631..4819404) Geobacter uraniireducens Rf4 5166257 YP_001232876.1 CDS Gura_4160 NC_009483.1 4819397 4820452 R PFAM: TrkA-N domain protein; TrkA-C domain protein; Ion transport 2 domain protein; TrkA domain-containing protein complement(4819397..4820452) Geobacter uraniireducens Rf4 5166258 YP_001232877.1 CDS Gura_4161 NC_009483.1 4820612 4821319 D PFAM: regulatory protein GntR, HTH; GntR domain protein; GntR family transcriptional regulator 4820612..4821319 Geobacter uraniireducens Rf4 5166304 YP_001232878.1 CDS Gura_4162 NC_009483.1 4821466 4822854 D catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 4821466..4822854 Geobacter uraniireducens Rf4 5166305 YP_001232879.1 CDS ispD NC_009483.1 4823026 4823727 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 4823026..4823727 Geobacter uraniireducens Rf4 5166306 YP_001232880.1 CDS ispF NC_009483.1 4823737 4824210 D catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 4823737..4824210 Geobacter uraniireducens Rf4 5166881 YP_001232881.1 CDS Gura_4165 NC_009483.1 4824247 4824576 D PFAM: DNA polymerase, beta domain protein region; DNA polymerase subunit beta 4824247..4824576 Geobacter uraniireducens Rf4 5166882 YP_001232882.1 CDS Gura_4166 NC_009483.1 4824566 4824946 D PFAM: protein of unknown function DUF86; hypothetical protein 4824566..4824946 Geobacter uraniireducens Rf4 5166883 YP_001232883.1 CDS Gura_4167 NC_009483.1 4824974 4826680 D catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 4824974..4826680 Geobacter uraniireducens Rf4 5165835 YP_001232884.1 CDS Gura_4168 NC_009483.1 4826723 4828591 D PFAM: MCP methyltransferase, CheR-type; TPR repeat-containing protein; response regulator receiver; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; response regulator receiver protein 4826723..4828591 Geobacter uraniireducens Rf4 5165836 YP_001232885.1 CDS Gura_4169 NC_009483.1 4828619 4829167 D PFAM: CheW domain protein; putative CheW protein 4828619..4829167 Geobacter uraniireducens Rf4 5165837 YP_001232886.1 CDS Gura_4170 NC_009483.1 4829219 4830955 D PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4829219..4830955 Geobacter uraniireducens Rf4 5164375 YP_001232887.1 CDS Gura_4171 NC_009483.1 4830956 4833016 D PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; CheA signal transduction histidine kinase 4830956..4833016 Geobacter uraniireducens Rf4 5164376 YP_001232888.1 CDS Gura_4172 NC_009483.1 4833055 4834098 D PFAM: CheB methylesterase; response regulator receiver; response regulator receiver modulated CheB methylesterase 4833055..4834098 Geobacter uraniireducens Rf4 5164377 YP_001232889.1 CDS Gura_4173 NC_009483.1 4834102 4834482 D PFAM: response regulator receiver; response regulator receiver protein 4834102..4834482 Geobacter uraniireducens Rf4 5166284 YP_001232890.1 CDS cysS NC_009483.1 4834570 4836054 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 4834570..4836054 Geobacter uraniireducens Rf4 5166285 YP_001232891.1 CDS Gura_4175 NC_009483.1 4836113 4836298 R PFAM: CopG domain protein DNA-binding domain protein; CopG/DNA-binding domain-containing protein complement(4836113..4836298) Geobacter uraniireducens Rf4 5166286 YP_001232892.1 CDS Gura_4176 NC_009483.1 4836600 4838867 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; hydrogenase large subunit domain protein; Fe-S cluster domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; sigma-54 dependent trancsriptional regulator complement(4836600..4838867) Geobacter uraniireducens Rf4 5165973 YP_001232893.1 CDS Gura_4177 NC_009483.1 4839252 4839467 D hypothetical protein 4839252..4839467 Geobacter uraniireducens Rf4 5165974 YP_001232894.1 CDS Gura_4178 NC_009483.1 4839530 4840987 D PFAM: transglutaminase domain protein; transglutaminase domain-containing protein 4839530..4840987 Geobacter uraniireducens Rf4 5165975 YP_001232895.1 CDS Gura_4179 NC_009483.1 4840992 4841840 R TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; cobalt ABC transporter ATPase complement(4840992..4841840) Geobacter uraniireducens Rf4 5162646 YP_001232896.1 CDS Gura_4180 NC_009483.1 4841958 4842716 R TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; cobalt ABC transporter inner membrane protein CbiQ complement(4841958..4842716) Geobacter uraniireducens Rf4 5162647 YP_001232897.1 CDS Gura_4181 NC_009483.1 4842773 4843117 R hypothetical protein complement(4842773..4843117) Geobacter uraniireducens Rf4 5162648 YP_001232898.1 CDS Gura_4182 NC_009483.1 4843114 4843869 R catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM complement(4843114..4843869) Geobacter uraniireducens Rf4 5163233 YP_001232899.1 CDS Gura_4183 NC_009483.1 4844209 4845516 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(4844209..4845516) Geobacter uraniireducens Rf4 5163234 YP_001232900.1 CDS Gura_4184 NC_009483.1 4845606 4846988 R responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase complement(4845606..4846988) Geobacter uraniireducens Rf4 5162831 YP_001232901.1 CDS Gura_4185 NC_009483.1 4847068 4847670 R PFAM: Phosphoglycerate mutase; phosphoglycerate mutase complement(4847068..4847670) Geobacter uraniireducens Rf4 5162832 YP_001232902.1 CDS Gura_4186 NC_009483.1 4847667 4848413 R TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; cobalamin 5'-phosphate synthase complement(4847667..4848413) Geobacter uraniireducens Rf4 5162833 YP_001232903.1 CDS cobT NC_009483.1 4848494 4849552 R catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(4848494..4849552) Geobacter uraniireducens Rf4 5163310 YP_001232904.1 CDS Gura_4188 NC_009483.1 4849657 4850178 R PFAM: cobalbumin biosynthesis enzyme; adenosylcobinamide-phosphate guanylyltransferase complement(4849657..4850178) Geobacter uraniireducens Rf4 5163311 YP_001232905.1 CDS engB NC_009483.1 4850510 4851124 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(4850510..4851124) Geobacter uraniireducens Rf4 5163312 YP_001232906.1 CDS Gura_4190 NC_009483.1 4851420 4852274 D TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; HDOD; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 4851420..4852274 Geobacter uraniireducens Rf4 5163829 YP_001232907.1 CDS Gura_4191 NC_009483.1 4852779 4854209 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 4852779..4854209 Geobacter uraniireducens Rf4 5163830 YP_001232908.1 CDS Gura_4192 NC_009483.1 4854226 4855590 D PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator 4854226..4855590 Geobacter uraniireducens Rf4 5163626 YP_001232909.1 CDS Gura_4193 NC_009483.1 4855636 4858200 D TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase, family 35; alpha-glucan phosphorylase 4855636..4858200 Geobacter uraniireducens Rf4 5163627 YP_001232910.1 CDS Gura_4194 NC_009483.1 4858308 4858595 R hypothetical protein complement(4858308..4858595) Geobacter uraniireducens Rf4 5163628 YP_001232911.1 CDS Gura_4195 NC_009483.1 4858592 4858852 R hypothetical protein complement(4858592..4858852) Geobacter uraniireducens Rf4 5163999 YP_001232912.1 CDS flhB NC_009483.1 4859067 4860131 R membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB complement(4859067..4860131) Geobacter uraniireducens Rf4 5164000 YP_001232913.1 CDS Gura_4197 NC_009483.1 4860141 4860926 R TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; flagellar biosynthetic protein FliR complement(4860141..4860926) Geobacter uraniireducens Rf4 5164001 YP_001232914.1 CDS Gura_4198 NC_009483.1 4860929 4861198 R TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ, family 3; flagellar biosynthetic protein FliQ complement(4860929..4861198) Geobacter uraniireducens Rf4 5164083 YP_001232915.1 CDS fliP NC_009483.1 4861410 4862165 R FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP complement(4861410..4862165) Geobacter uraniireducens Rf4 5164084 YP_001232916.1 CDS Gura_4200 NC_009483.1 4862162 4862650 R hypothetical protein complement(4862162..4862650) Geobacter uraniireducens Rf4 5164085 YP_001232917.1 CDS Gura_4201 NC_009483.1 4862647 4862958 R TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliN complement(4862647..4862958) Geobacter uraniireducens Rf4 5164112 YP_001232918.1 CDS Gura_4202 NC_009483.1 4862948 4863934 R PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; flagellar motor switch protein FliM complement(4862948..4863934) Geobacter uraniireducens Rf4 5164113 YP_001232919.1 CDS Gura_4203 NC_009483.1 4863946 4864446 R PFAM: flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL complement(4863946..4864446) Geobacter uraniireducens Rf4 5164114 YP_001232920.1 CDS Gura_4204 NC_009483.1 4864749 4865633 R PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; hypothetical protein complement(4864749..4865633) Geobacter uraniireducens Rf4 5164109 YP_001232921.1 CDS Gura_4205 NC_009483.1 4865815 4866204 R TIGRFAM: flagellar operon protein; flagellar operon protein complement(4865815..4866204) Geobacter uraniireducens Rf4 5164110 YP_001232922.1 CDS Gura_4206 NC_009483.1 4866205 4866870 R PFAM: flagellar hook capping protein; flagellar hook capping protein complement(4866205..4866870) Geobacter uraniireducens Rf4 5164111 YP_001232923.1 CDS Gura_4207 NC_009483.1 4866889 4868703 R PFAM: flagellar hook-length control protein; flagellar hook-length control protein complement(4866889..4868703) Geobacter uraniireducens Rf4 5164562 YP_001232924.1 CDS Gura_4208 NC_009483.1 4868805 4869350 R hypothetical protein complement(4868805..4869350) Geobacter uraniireducens Rf4 5164563 YP_001232925.1 CDS Gura_4209 NC_009483.1 4869347 4869793 R TIGRFAM: flagellar export protein FliJ; flagellar export protein FliJ complement(4869347..4869793) Geobacter uraniireducens Rf4 5164564 YP_001232926.1 CDS Gura_4210 NC_009483.1 4869873 4871204 R TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; SMART: AAA ATPase; flagellar protein export ATPase FliI complement(4869873..4871204) Geobacter uraniireducens Rf4 5164608 YP_001232927.1 CDS Gura_4211 NC_009483.1 4871185 4871994 R flagellar biosynthesis/type III secretory pathway protein-like protein complement(4871185..4871994) Geobacter uraniireducens Rf4 5164609 YP_001232928.1 CDS Gura_4212 NC_009483.1 4871981 4872973 R PFAM: flagellar motor switch protein FliG; flagellar motor switch protein FliG complement(4871981..4872973) Geobacter uraniireducens Rf4 5164610 YP_001232929.1 CDS Gura_4213 NC_009483.1 4872994 4874571 R TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring C-terminal domain protein; flagellar M-ring protein FliF complement(4872994..4874571) Geobacter uraniireducens Rf4 5164428 YP_001232930.1 CDS Gura_4214 NC_009483.1 4874635 4874943 R TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex subunit FliE complement(4874635..4874943) Geobacter uraniireducens Rf4 5164429 YP_001232931.1 CDS Gura_4215 NC_009483.1 4875002 4875442 R TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal-body rod protein FlgC complement(4875002..4875442) Geobacter uraniireducens Rf4 5164430 YP_001232932.1 CDS Gura_4216 NC_009483.1 4875443 4875865 R TIGRFAM: flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB complement(4875443..4875865) Geobacter uraniireducens Rf4 5164960 YP_001232933.1 CDS Gura_4217 NC_009483.1 4875996 4878050 R PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; hypothetical protein complement(4875996..4878050) Geobacter uraniireducens Rf4 5164961 YP_001232934.1 CDS Gura_4218 NC_009483.1 4878378 4879412 R PFAM: response regulator receiver; response regulator receiver protein complement(4878378..4879412) Geobacter uraniireducens Rf4 5164962 YP_001232935.1 CDS Gura_4219 NC_009483.1 4879427 4879933 R inhibitor of MCP methylation CheC-like protein complement(4879427..4879933) Geobacter uraniireducens Rf4 5164868 YP_001232936.1 CDS Gura_4220 NC_009483.1 4879933 4880295 R PFAM: response regulator receiver; response regulator receiver protein complement(4879933..4880295) Geobacter uraniireducens Rf4 5164869 YP_001232937.1 CDS Gura_4221 NC_009483.1 4880527 4881606 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS/PAC sensor signal transduction histidine kinase complement(4880527..4881606) Geobacter uraniireducens Rf4 5164870 YP_001232938.1 CDS Gura_4222 NC_009483.1 4881883 4883586 D PFAM: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4881883..4883586 Geobacter uraniireducens Rf4 5164514 YP_001232939.1 CDS Gura_4223 NC_009483.1 4883561 4883857 R PFAM: regulatory protein, ArsR; regulatory protein ArsR complement(4883561..4883857) Geobacter uraniireducens Rf4 5164515 YP_001232940.1 CDS Gura_4224 NC_009483.1 4883899 4884276 R PFAM: Rhodanese domain protein; rhodanese domain-containing protein complement(4883899..4884276) Geobacter uraniireducens Rf4 5164516 YP_001232941.1 CDS Gura_4225 NC_009483.1 4884313 4885143 R PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein complement(4884313..4885143) Geobacter uraniireducens Rf4 5162664 YP_001232942.1 CDS Gura_4226 NC_009483.1 4885140 4885352 R hypothetical protein complement(4885140..4885352) Geobacter uraniireducens Rf4 5162665 YP_001232943.1 CDS Gura_4227 NC_009483.1 4885427 4885804 R TIGRFAM: C_GCAxxG_C_C family protein; C_GCAxxG_C_C family protein complement(4885427..4885804) Geobacter uraniireducens Rf4 5162666 YP_001232944.1 CDS Gura_4228 NC_009483.1 4885914 4889129 R PFAM: acriflavin resistance protein; acriflavin resistance protein complement(4885914..4889129) Geobacter uraniireducens Rf4 5165112 YP_001232945.1 CDS Gura_4229 NC_009483.1 4889227 4890342 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(4889227..4890342) Geobacter uraniireducens Rf4 5165113 YP_001232946.1 CDS Gura_4230 NC_009483.1 4890339 4891715 R PFAM: outer membrane efflux protein; outer membrane efflux protein complement(4890339..4891715) Geobacter uraniireducens Rf4 5165114 YP_001232947.1 CDS Gura_4231 NC_009483.1 4892007 4893470 R TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N complement(4892007..4893470) Geobacter uraniireducens Rf4 5165103 YP_001232948.1 CDS Gura_4232 NC_009483.1 4893503 4895080 R TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M complement(4893503..4895080) Geobacter uraniireducens Rf4 5165104 YP_001232949.1 CDS Gura_4233 NC_009483.1 4895122 4897128 R TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L complement(4895122..4897128) Geobacter uraniireducens Rf4 5165105 YP_001232950.1 CDS Gura_4234 NC_009483.1 4897174 4897476 R PFAM: NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase subunit 4L complement(4897174..4897476) Geobacter uraniireducens Rf4 5165100 YP_001232951.1 CDS Gura_4235 NC_009483.1 4897496 4898002 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 complement(4897496..4898002) Geobacter uraniireducens Rf4 5165101 YP_001232952.1 CDS Gura_4236 NC_009483.1 4898014 4898412 R TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; NADH-quinone oxidoreductase subunit I complement(4898014..4898412) Geobacter uraniireducens Rf4 5165102 YP_001232953.1 CDS Gura_4237 NC_009483.1 4898440 4899489 R PFAM: respiratory-chain NADH dehydrogenase, subunit 1; NADH dehydrogenase (quinone) complement(4898440..4899489) Geobacter uraniireducens Rf4 5165353 YP_001232954.1 CDS Gura_4238 NC_009483.1 4899536 4902022 R PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase complement(4899536..4902022) Geobacter uraniireducens Rf4 5165354 YP_001232955.1 CDS Gura_4239 NC_009483.1 4902065 4903846 R PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; NADH dehydrogenase (quinone) complement(4902065..4903846) Geobacter uraniireducens Rf4 5165355 YP_001232956.1 CDS Gura_4240 NC_009483.1 4903883 4904389 R PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; NADH dehydrogenase (ubiquinone), 24 kDa subunit complement(4903883..4904389) Geobacter uraniireducens Rf4 5165374 YP_001232957.1 CDS Gura_4241 NC_009483.1 4904418 4905590 R TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; NADH dehydrogenase I subunit D complement(4904418..4905590) Geobacter uraniireducens Rf4 5165375 YP_001232958.1 CDS Gura_4242 NC_009483.1 4905632 4906126 R TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone), 30 kDa subunit; NADH (or F420H2) dehydrogenase subunit C complement(4905632..4906126) Geobacter uraniireducens Rf4 5165376 YP_001232959.1 CDS Gura_4243 NC_009483.1 4906157 4906669 R TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH-quinone oxidoreductase subunit B complement(4906157..4906669) Geobacter uraniireducens Rf4 5165424 YP_001232960.1 CDS Gura_4244 NC_009483.1 4906660 4907016 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 complement(4906660..4907016) Geobacter uraniireducens Rf4 5165425 YP_001232961.1 CDS Gura_4245 NC_009483.1 4907315 4908598 D Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 4907315..4908598 Geobacter uraniireducens Rf4 5165426 YP_001232962.1 CDS Gura_4246 NC_009483.1 4908694 4908975 D hypothetical protein 4908694..4908975 Geobacter uraniireducens Rf4 5165458 YP_001232963.1 CDS Gura_4247 NC_009483.1 4908953 4909339 D hypothetical protein 4908953..4909339 Geobacter uraniireducens Rf4 5165459 YP_001232964.1 CDS Gura_4248 NC_009483.1 4909345 4910034 D TIGRFAM: ATP synthase F0, A subunit; PFAM: H+-transporting two-sector ATPase, A subunit; ATP synthase F0 subunit A 4909345..4910034 Geobacter uraniireducens Rf4 5165460 YP_001232965.1 CDS Gura_4249 NC_009483.1 4910137 4910412 D TIGRFAM: ATP synthase F0, C subunit; PFAM: H+-transporting two-sector ATPase, C subunit; ATP synthase F0 subunit C 4910137..4910412 Geobacter uraniireducens Rf4 5165631 YP_001232966.1 CDS Gura_4250 NC_009483.1 4910708 4912153 D catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent; glyceraldehyde-3-phosphate dehydrogenase 4910708..4912153 Geobacter uraniireducens Rf4 5165632 YP_001232967.1 CDS Gura_4251 NC_009483.1 4912253 4913656 R PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase complement(4912253..4913656) Geobacter uraniireducens Rf4 5165633 YP_001232968.1 CDS Gura_4252 NC_009483.1 4914210 4915697 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(4914210..4915697) Geobacter uraniireducens Rf4 5165919 YP_001232969.1 CDS Gura_4253 NC_009483.1 4915814 4916527 D PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; putative hydrolase 4915814..4916527 Geobacter uraniireducens Rf4 5165920 YP_001232970.1 CDS Gura_4254 NC_009483.1 4916581 4917804 R TIGRFAM: PAS sensor protein; PFAM: histidine kinase, HAMP region domain protein; PAS fold domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein complement(4916581..4917804) Geobacter uraniireducens Rf4 5165921 YP_001232971.1 CDS Gura_4255 NC_009483.1 4917894 4918178 R hypothetical protein complement(4917894..4918178) Geobacter uraniireducens Rf4 5165775 YP_001232972.1 CDS Gura_4256 NC_009483.1 4918430 4919203 D PFAM: Cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 4918430..4919203 Geobacter uraniireducens Rf4 5165776 YP_001232973.1 CDS Gura_4257 NC_009483.1 4919196 4920032 D TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; parB-like partition protein 4919196..4920032 Geobacter uraniireducens Rf4 5165777 YP_001232974.1 CDS Gura_4258 NC_009483.1 4920218 4920628 D PFAM: H+-transporting two-sector ATPase, B/B' subunit; H+-transporting two-sector ATPase subunit B/B' 4920218..4920628 Geobacter uraniireducens Rf4 5165795 YP_001232975.1 CDS Gura_4259 NC_009483.1 4920630 4921247 D PFAM: H+-transporting two-sector ATPase, B/B' subunit; H+-transporting two-sector ATPase subunit B/B' 4920630..4921247 Geobacter uraniireducens Rf4 5165796 YP_001232976.1 CDS Gura_4260 NC_009483.1 4921244 4921786 D produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 4921244..4921786 Geobacter uraniireducens Rf4 5165797 YP_001232977.1 CDS Gura_4261 NC_009483.1 4921796 4923304 D produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 4921796..4923304 Geobacter uraniireducens Rf4 5165861 YP_001232978.1 CDS Gura_4262 NC_009483.1 4923323 4924186 D produces ATP from ADP in the presence of a proton gradient across the membrane; the gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 4923323..4924186 Geobacter uraniireducens Rf4 5165862 YP_001232979.1 CDS Gura_4263 NC_009483.1 4924243 4925655 D Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 4924243..4925655 Geobacter uraniireducens Rf4 5165863 YP_001232980.1 CDS atpC NC_009483.1 4925742 4926158 D produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon 4925742..4926158 Geobacter uraniireducens Rf4 5165829 YP_001232981.1 CDS Gura_4265 NC_009483.1 4926284 4926868 R PFAM: protein of unknown function UPF0153; hypothetical protein complement(4926284..4926868) Geobacter uraniireducens Rf4 5165830 YP_001232982.1 CDS Gura_4266 NC_009483.1 4927018 4927404 D hypothetical protein 4927018..4927404 Geobacter uraniireducens Rf4 5165831 YP_001232983.1 CDS Gura_4267 NC_009483.1 4927420 4927965 D PFAM: metal-dependent phosphohydrolase, HD sub domain; metal dependent phosphohydrolase 4927420..4927965 Geobacter uraniireducens Rf4 5165789 YP_001232984.1 CDS Gura_4268 NC_009483.1 4928120 4929151 D TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 4928120..4929151 Geobacter uraniireducens Rf4 5165790 YP_001232985.1 CDS Gura_4269 NC_009483.1 4929148 4930101 D PFAM: glycosyl transferase, family 51; glycosyl transferase family protein 4929148..4930101 Geobacter uraniireducens Rf4 5165791 YP_001232986.1 CDS Gura_4270 NC_009483.1 4930365 4931450 D PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; response regulator receiver modulated metal dependent phosphohydrolase 4930365..4931450 Geobacter uraniireducens Rf4 5167057 YP_001232987.1 CDS Gura_4271 NC_009483.1 4931503 4933080 D PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; histidine kinase 4931503..4933080 Geobacter uraniireducens Rf4 5167058 YP_001232988.1 CDS Gura_4272 NC_009483.1 4933070 4934074 R PFAM: thiamine biosynthesis protein; thiamine biosynthesis protein complement(4933070..4934074) Geobacter uraniireducens Rf4 5167059 YP_001232989.1 CDS Gura_4273 NC_009483.1 4934250 4935908 D PFAM: General secretory system II, protein E domain protein; general secretion pathway protein E 4934250..4935908 Geobacter uraniireducens Rf4 5166504 YP_001232990.1 CDS Gura_4274 NC_009483.1 4935923 4936993 D TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein 4935923..4936993 Geobacter uraniireducens Rf4 5166505 YP_001232991.1 CDS Gura_4275 NC_009483.1 4937015 4937770 R PFAM: Methyltransferase type 11; Methyltransferase type 12; type 11 methyltransferase complement(4937015..4937770) Geobacter uraniireducens Rf4 5166506 YP_001232992.1 CDS Gura_4276 NC_009483.1 4937767 4938942 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; glutamine--scyllo-inositol transaminase complement(4937767..4938942) Geobacter uraniireducens Rf4 5166134 YP_001232993.1 CDS Gura_4277 NC_009483.1 4938923 4939900 R PFAM: Semialdehyde dehydrogenase, NAD - binding; oxidoreductase domain protein; Oxidoreductase, C-terminal domain; oxidoreductase domain-containing protein complement(4938923..4939900) Geobacter uraniireducens Rf4 5166135 YP_001232994.1 CDS Gura_4278 NC_009483.1 4939996 4941441 R PFAM: NDP-hexose 2,3-dehydratase; NDP-hexose 2,3-dehydratase complement(4939996..4941441) Geobacter uraniireducens Rf4 5166136 YP_001232995.1 CDS Gura_4279 NC_009483.1 4941416 4942417 R PFAM: glycosyl transferase, family 2; glycosyl transferase family protein complement(4941416..4942417) Geobacter uraniireducens Rf4 5166091 YP_001232996.1 CDS Gura_4280 NC_009483.1 4942612 4942950 R hypothetical protein complement(4942612..4942950) Geobacter uraniireducens Rf4 5166092 YP_001232997.1 CDS Gura_4281 NC_009483.1 4943813 4945204 D TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; UbiD family decarboxylase 4943813..4945204 Geobacter uraniireducens Rf4 5166620 YP_001232998.1 CDS ubiA NC_009483.1 4945230 4946102 D UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase 4945230..4946102 Geobacter uraniireducens Rf4 5166621 YP_001232999.1 CDS Gura_4283 NC_009483.1 4946099 4946713 D TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 4946099..4946713 Geobacter uraniireducens Rf4 5166519 YP_001233000.1 CDS Gura_4284 NC_009483.1 4946760 4947842 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 4946760..4947842 Geobacter uraniireducens Rf4 5166520 YP_001233001.1 CDS Gura_4285 NC_009483.1 4947909 4949003 D PFAM: Radical SAM domain protein; radical SAM domain-containing protein 4947909..4949003 Geobacter uraniireducens Rf4 5166521 YP_001233002.1 CDS Gura_4286 NC_009483.1 4949022 4950065 D TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase, class I and II; histidinol-phosphate aminotransferase 4949022..4950065 Geobacter uraniireducens Rf4 5166319 YP_001233003.1 CDS Gura_4287 NC_009483.1 4950062 4951291 D PFAM: HRDC domain protein; 3'-5' exonuclease; 3'-5' exonuclease 4950062..4951291 Geobacter uraniireducens Rf4 5166320 YP_001233004.1 CDS Gura_4288 NC_009483.1 4951293 4952060 R hypothetical protein complement(4951293..4952060) Geobacter uraniireducens Rf4 5166321 YP_001233005.1 CDS Gura_4289 NC_009483.1 4952175 4952915 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(4952175..4952915) Geobacter uraniireducens Rf4 5166013 YP_001233006.1 CDS Gura_4290 NC_009483.1 4952916 4953863 R TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: methyltransferase small; ribosomal L11 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; 50S ribosomal protein L11 methyltransferase complement(4952916..4953863) Geobacter uraniireducens Rf4 5166014 YP_001233007.1 CDS Gura_4291 NC_009483.1 4954001 4955161 D TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 4954001..4955161 Geobacter uraniireducens Rf4 5166015 YP_001233008.1 CDS Gura_4292 NC_009483.1 4955266 4956075 D PFAM: protein of unknown function DUF299; hypothetical protein 4955266..4956075 Geobacter uraniireducens Rf4 5165979 YP_001233009.1 CDS Gura_4293 NC_009483.1 4956150 4956824 D PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 4956150..4956824 Geobacter uraniireducens Rf4 5165980 YP_001233010.1 CDS Gura_4294 NC_009483.1 4956829 4958238 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 4956829..4958238 Geobacter uraniireducens Rf4 5165981 YP_001233011.1 CDS Gura_4295 NC_009483.1 4958325 4959725 D TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 4958325..4959725 Geobacter uraniireducens Rf4 5166075 YP_001233012.1 CDS Gura_4296 NC_009483.1 4959834 4961981 R TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; ATP-dependent DNA helicase RecQ complement(4959834..4961981) Geobacter uraniireducens Rf4 5166076 YP_001233013.1 CDS Gura_4297 NC_009483.1 4962046 4962378 R hypothetical protein complement(4962046..4962378) Geobacter uraniireducens Rf4 5166077 YP_001233014.1 CDS Gura_4298 NC_009483.1 4962414 4963037 R PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(4962414..4963037) Geobacter uraniireducens Rf4 5166072 YP_001233015.1 CDS Gura_4299 NC_009483.1 4963038 4964279 R PFAM: General substrate transporter; major facilitator superfamily MFS_1; major facilitator transporter complement(4963038..4964279) Geobacter uraniireducens Rf4 5166073 YP_001233016.1 CDS Gura_4300 NC_009483.1 4964643 4966388 D PFAM: AAA-4 family protein; putative transcriptional regulator 4964643..4966388 Geobacter uraniireducens Rf4 5166074 YP_001233017.1 CDS Gura_4301 NC_009483.1 4966999 4969380 D PFAM: protein of unknown function DUF450; hypothetical protein 4966999..4969380 Geobacter uraniireducens Rf4 5166808 YP_001233018.1 CDS Gura_4302 NC_009483.1 4969645 4970673 R catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase complement(4969645..4970673) Geobacter uraniireducens Rf4 5166809 YP_001233019.1 CDS Gura_4303 NC_009483.1 4970857 4971141 D hypothetical protein 4970857..4971141 Geobacter uraniireducens Rf4 5166810 YP_001233020.1 CDS Gura_4304 NC_009483.1 4971225 4971497 D hypothetical protein 4971225..4971497 Geobacter uraniireducens Rf4 5164585 YP_001233021.1 CDS Gura_4305 NC_009483.1 4971497 4972060 D hypothetical protein 4971497..4972060 Geobacter uraniireducens Rf4 5164586 YP_001233022.1 CDS groES NC_009483.1 4972259 4972549 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 4972259..4972549 Geobacter uraniireducens Rf4 5164587 YP_001233023.1 CDS groEL NC_009483.1 4972593 4974242 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 4972593..4974242 Geobacter uraniireducens Rf4 5163958 YP_001233024.1 CDS Gura_4308 NC_009483.1 4974467 4976527 D PFAM: PrkA serine kinase; PrkA AAA domain protein; putative serine protein kinase PrkA 4974467..4976527 Geobacter uraniireducens Rf4 5163959 YP_001233025.1 CDS Gura_4309 NC_009483.1 4976550 4977917 D hypothetical protein 4976550..4977917 Geobacter uraniireducens Rf4 5163960 YP_001233026.1 CDS Gura_4310 NC_009483.1 4977979 4979628 D hypothetical protein 4977979..4979628 Geobacter uraniireducens Rf4 5164154 YP_001233027.1 CDS Gura_4311 NC_009483.1 4979629 4981941 D SMART: PrkA AAA domain protein; putative serine protein kinase PrkA 4979629..4981941 Geobacter uraniireducens Rf4 5164155 YP_001233028.1 CDS Gura_4312 NC_009483.1 4981956 4983773 R PFAM: K+ potassium transporter; K+ potassium transporter complement(4981956..4983773) Geobacter uraniireducens Rf4 5164156 YP_001233029.1 CDS ileS NC_009483.1 4983929 4986703 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 4983929..4986703 Geobacter uraniireducens Rf4 5163372 YP_001233030.1 CDS lspA NC_009483.1 4986731 4987222 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 4986731..4987222 Geobacter uraniireducens Rf4 5163373 YP_001233031.1 CDS Gura_4315 NC_009483.1 4987773 4988948 R hypothetical protein complement(4987773..4988948) Geobacter uraniireducens Rf4 5163374 YP_001233032.1 CDS Gura_4316 NC_009483.1 4989054 4989347 R hypothetical protein complement(4989054..4989347) Geobacter uraniireducens Rf4 5163144 YP_001233033.1 CDS Gura_4317 NC_009483.1 4989448 4990455 R TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein complement(4989448..4990455) Geobacter uraniireducens Rf4 5163145 YP_001233034.1 CDS Gura_4318 NC_009483.1 4990474 4990734 R hypothetical protein complement(4990474..4990734) Geobacter uraniireducens Rf4 5163146 YP_001233035.1 CDS Gura_4319 NC_009483.1 4990789 4991853 R PFAM: protein of unknown function DUF395, YeeE/YedE; hypothetical protein complement(4990789..4991853) Geobacter uraniireducens Rf4 5163061 YP_001233036.1 CDS Gura_4320 NC_009483.1 4991934 4992320 R PFAM: thioesterase superfamily protein; thioesterase superfamily protein complement(4991934..4992320) Geobacter uraniireducens Rf4 5163062 YP_001233037.1 CDS Gura_4321 NC_009483.1 4992362 4995538 R PFAM: glutamate-ammonia ligase adenylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase complement(4992362..4995538) Geobacter uraniireducens Rf4 5163063 YP_001233038.1 CDS Gura_4322 NC_009483.1 4995535 4996575 R TIGRFAM: putative translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; aIF-2BI family translation initiation factor complement(4995535..4996575) Geobacter uraniireducens Rf4 5162795 YP_001233039.1 CDS gatB NC_009483.1 4996678 4998117 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(4996678..4998117) Geobacter uraniireducens Rf4 5162796 YP_001233040.1 CDS gatA NC_009483.1 4998168 4999625 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(4998168..4999625) Geobacter uraniireducens Rf4 5162797 YP_001233041.1 CDS Gura_4325 NC_009483.1 4999804 5000091 R TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase, C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C complement(4999804..5000091) Geobacter uraniireducens Rf4 5166340 YP_001233042.1 CDS Gura_4326 NC_009483.1 5000239 5002473 R PFAM: UvrD/REP helicase; UvrD/REP helicase complement(5000239..5002473) Geobacter uraniireducens Rf4 5166341 YP_001233043.1 CDS Gura_4327 NC_009483.1 5003029 5004768 D TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 5003029..5004768 Geobacter uraniireducens Rf4 5163789 YP_001233044.1 CDS Gura_4328 NC_009483.1 5004840 5005154 D PFAM: conserved hypothetical protein 103; hypothetical protein 5004840..5005154 Geobacter uraniireducens Rf4 5164970 YP_001233045.1 CDS recR NC_009483.1 5005332 5005925 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 5005332..5005925 Geobacter uraniireducens Rf4 5164971 YP_001233046.1 CDS Gura_4330 NC_009483.1 5006003 5009590 D PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 5006003..5009590 Geobacter uraniireducens Rf4 5162964 YP_001233047.1 CDS Gura_4331 NC_009483.1 5009784 5010275 D PFAM: Roadblock/LC7 family protein; roadblock/LC7 family protein 5009784..5010275 Geobacter uraniireducens Rf4 5162965 YP_001233048.1 CDS Gura_4332 NC_009483.1 5010296 5010883 D GTPase-like protein 5010296..5010883 Geobacter uraniireducens Rf4 5162966 YP_001233049.1 CDS Gura_4333 NC_009483.1 5010983 5012347 R PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein complement(5010983..5012347) Geobacter uraniireducens Rf4 5162745 YP_001233050.1 CDS Gura_4334 NC_009483.1 5012669 5016178 R PFAM: protein of unknown function DUF748; hypothetical protein complement(5012669..5016178) Geobacter uraniireducens Rf4 5162746 YP_001233051.1 CDS Gura_4335 NC_009483.1 5016209 5017705 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM domain-containing protein complement(5016209..5017705) Geobacter uraniireducens Rf4 5162747 YP_001233052.1 CDS Gura_4336 NC_009483.1 5018110 5018622 D PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5018110..5018622 Geobacter uraniireducens Rf4 5166384 YP_001233053.1 CDS Gura_4337 NC_009483.1 5018619 5019758 D PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase M20 5018619..5019758 Geobacter uraniireducens Rf4 5166385 YP_001233054.1 CDS Gura_4338 NC_009483.1 5020204 5020461 R hypothetical protein complement(5020204..5020461) Geobacter uraniireducens Rf4 5166386 YP_001233055.1 CDS Gura_4339 NC_009483.1 5020596 5021102 R hypothetical protein complement(5020596..5021102) Geobacter uraniireducens Rf4 5162736 YP_001233056.1 CDS Gura_4340 NC_009483.1 5021149 5030214 R PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; glycosyltransferase complement(5021149..5030214) Geobacter uraniireducens Rf4 5162737 YP_001233057.1 CDS Gura_4341 NC_009483.1 5030908 5031255 D hypothetical protein 5030908..5031255 Geobacter uraniireducens Rf4 5162738 YP_001233058.1 CDS Gura_4342 NC_009483.1 5031679 5031996 R hypothetical protein complement(5031679..5031996) Geobacter uraniireducens Rf4 5165788 YP_001233059.1 CDS Gura_4343 NC_009483.1 5031981 5032370 R hypothetical protein complement(5031981..5032370) Geobacter uraniireducens Rf4 5164054 YP_001233060.1 CDS Gura_4344 NC_009483.1 5032697 5033230 D hypothetical protein 5032697..5033230 Geobacter uraniireducens Rf4 5164055 YP_001233061.1 CDS Gura_4345 NC_009483.1 5033227 5034252 D PFAM: Integrase, catalytic region; integrase catalytic subunit 5033227..5034252 Geobacter uraniireducens Rf4 5164056 YP_001233062.1 CDS Gura_4346 NC_009483.1 5034601 5035392 R PFAM: regulatory protein, IclR; regulatory protein IclR complement(5034601..5035392) Geobacter uraniireducens Rf4 5165280 YP_001233063.1 CDS Gura_4347 NC_009483.1 5035488 5035667 R hypothetical protein complement(5035488..5035667) Geobacter uraniireducens Rf4 5165281 YP_001233064.1 CDS Gura_4348 NC_009483.1 5035796 5036671 R TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit alpha complement(5035796..5036671) Geobacter uraniireducens Rf4 5165282 YP_001233065.1 CDS Gura_4349 NC_009483.1 5036688 5037851 R TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; succinyl-CoA synthetase subunit beta complement(5036688..5037851) Geobacter uraniireducens Rf4 5164812 YP_001233066.1 CDS Gura_4350 NC_009483.1 5038163 5038543 R hypothetical protein complement(5038163..5038543) Geobacter uraniireducens Rf4 5164813 YP_001233067.1 CDS Gura_4351 NC_009483.1 5038610 5039485 R hypothetical protein complement(5038610..5039485) Geobacter uraniireducens Rf4 5164814 YP_001233068.1 CDS Gura_4352 NC_009483.1 5039574 5040638 R PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase complement(5039574..5040638) Geobacter uraniireducens Rf4 5163952 YP_001233069.1 CDS Gura_4353 NC_009483.1 5040726 5040977 R hypothetical protein complement(5040726..5040977) Geobacter uraniireducens Rf4 5163953 YP_001233070.1 CDS Gura_4354 NC_009483.1 5040952 5042115 R PFAM: Thiolase; thiolase complement(5040952..5042115) Geobacter uraniireducens Rf4 5163954 YP_001233071.1 CDS Gura_4355 NC_009483.1 5042137 5042793 R TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B complement(5042137..5042793) Geobacter uraniireducens Rf4 5163811 YP_001233072.1 CDS Gura_4356 NC_009483.1 5042806 5043495 R TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A complement(5042806..5043495) Geobacter uraniireducens Rf4 5163812 YP_001233073.1 CDS Gura_4357 NC_009483.1 5043525 5044784 R PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; cobalamin synthesis protein, P47K complement(5043525..5044784) Geobacter uraniireducens Rf4 5163813 YP_001233074.1 CDS Gura_4358 NC_009483.1 5045164 5046039 R hypothetical protein complement(5045164..5046039) Geobacter uraniireducens Rf4 5164202 YP_001233075.1 CDS Gura_4359 NC_009483.1 5046036 5048312 R PFAM: Hydantoinase B/oxoprolinase; hydantoinase B/oxoprolinase complement(5046036..5048312) Geobacter uraniireducens Rf4 5164203 YP_001233076.1 CDS Gura_4360 NC_009483.1 5048360 5050486 R PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; 5-oxoprolinase complement(5048360..5050486) Geobacter uraniireducens Rf4 5164204 YP_001233077.1 CDS Gura_4361 NC_009483.1 5050577 5050975 R hypothetical protein complement(5050577..5050975) Geobacter uraniireducens Rf4 5164026 YP_001233078.1 CDS Gura_4362 NC_009483.1 5050980 5052911 R PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; 5-oxoprolinase complement(5050980..5052911) Geobacter uraniireducens Rf4 5164027 YP_001233079.1 CDS Gura_4363 NC_009483.1 5053675 5055636 D PFAM: helix-turn-helix- domain containing protein, AraC type; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; SMART: AAA ATPase; Fis family GAF modulated sigma54 specific transcriptional regulator 5053675..5055636 Geobacter uraniireducens Rf4 5164028 YP_001233080.1 CDS Gura_4364 NC_009483.1 5055858 5057411 D PFAM: ATP-binding region, ATPase domain protein; histidine kinase A domain protein; Cache, type 2 domain protein; integral membrane sensor signal transduction histidine kinase 5055858..5057411 Geobacter uraniireducens Rf4 5166887 YP_001233081.1 CDS Gura_4365 NC_009483.1 5057514 5058536 D PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; response regulator receiver protein 5057514..5058536 Geobacter uraniireducens Rf4 5166888 YP_001233082.1 CDS Gura_4366 NC_009483.1 5058641 5059174 D hypothetical protein 5058641..5059174 Geobacter uraniireducens Rf4 5166889 YP_001233083.1 CDS Gura_4367 NC_009483.1 5059171 5060196 D PFAM: Integrase, catalytic region; integrase catalytic subunit 5059171..5060196 Geobacter uraniireducens Rf4 5166959 YP_001233084.1 CDS Gura_4368 NC_009483.1 5060485 5060856 R hypothetical protein complement(5060485..5060856) Geobacter uraniireducens Rf4 5166960 YP_001233085.1 CDS Gura_4369 NC_009483.1 5060912 5062003 R PFAM: aldo/keto reductase; aldo/keto reductase complement(5060912..5062003) Geobacter uraniireducens Rf4 5166961 YP_001233086.1 CDS Gura_4370 NC_009483.1 5062035 5063198 R PFAM: Carboxymuconolactone decarboxylase; Cupin 2, conserved barrel domain protein; cupin 2 domain-containing protein complement(5062035..5063198) Geobacter uraniireducens Rf4 5166956 YP_001233087.1 CDS Gura_4371 NC_009483.1 5063215 5064327 R hypothetical protein complement(5063215..5064327) Geobacter uraniireducens Rf4 5166957 YP_001233088.1 CDS Gura_4372 NC_009483.1 5064324 5065397 R alpha/beta fold family hydrolase-like protein complement(5064324..5065397) Geobacter uraniireducens Rf4 5166958 YP_001233089.1 CDS Gura_4373 NC_009483.1 5065424 5066275 R PFAM: aldo/keto reductase; 2,5-didehydrogluconate reductase complement(5065424..5066275) Geobacter uraniireducens Rf4 5166310 YP_001233090.1 CDS Gura_4374 NC_009483.1 5066310 5067314 R PFAM: aldo/keto reductase; aldo/keto reductase complement(5066310..5067314) Geobacter uraniireducens Rf4 5166311 YP_001233091.1 CDS Gura_4375 NC_009483.1 5067486 5068424 D PFAM: helix-turn-helix- domain containing protein, AraC type; AraC-type transcriptional regulator domain protein; AraC-like transcriptional regulator 5067486..5068424 Geobacter uraniireducens Rf4 5166312 YP_001233092.1 CDS Gura_4376 NC_009483.1 5068901 5069806 D PFAM: Rhodanese domain protein; rhodanese domain-containing protein 5068901..5069806 Geobacter uraniireducens Rf4 5167016 YP_001233093.1 CDS Gura_4377 NC_009483.1 5069807 5071717 R TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase complement(5069807..5071717) Geobacter uraniireducens Rf4 5167017 YP_001233094.1 CDS Gura_4378 NC_009483.1 5071719 5074040 R TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region, ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase complement(5071719..5074040) Geobacter uraniireducens Rf4 5167018 YP_001233095.1 CDS Gura_4379 NC_009483.1 5074417 5077305 R TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; excinuclease ABC subunit A complement(5074417..5077305) Geobacter uraniireducens Rf4 5166212 YP_001233096.1 CDS Gura_4380 NC_009483.1 5077598 5077798 R PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein complement(5077598..5077798) Geobacter uraniireducens Rf4 5166213 YP_001233097.1 CDS Gura_4381 NC_009483.1 5077907 5079316 R PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase complement(5077907..5079316) Geobacter uraniireducens Rf4 5166214 YP_001233098.1 CDS Gura_4382 NC_009483.1 5079615 5080217 D PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 5079615..5080217 Geobacter uraniireducens Rf4 5166125 YP_001233099.1 CDS Gura_4383 NC_009483.1 5080344 5081051 R hypothetical protein complement(5080344..5081051) Geobacter uraniireducens Rf4 5166126 YP_001233100.1 CDS Gura_4384 NC_009483.1 5081113 5081832 R PFAM: cytochrome c assembly protein; cytochrome c assembly protein complement(5081113..5081832) Geobacter uraniireducens Rf4 5166127 YP_001233101.1 CDS Gura_4385 NC_009483.1 5081865 5082371 R TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase complement(5081865..5082371) Geobacter uraniireducens Rf4 5167001 YP_001233102.1 CDS Gura_4386 NC_009483.1 5082376 5082942 R PFAM: amino acid-binding ACT domain protein; amino acid-binding ACT domain-containing protein complement(5082376..5082942) Geobacter uraniireducens Rf4 5167002 YP_001233103.1 CDS Gura_4387 NC_009483.1 5083110 5083619 R hypothetical protein complement(5083110..5083619) Geobacter uraniireducens Rf4 5167003 YP_001233104.1 CDS Gura_4388 NC_009483.1 5083595 5084662 R PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; helix-turn-helix domain-containing protein complement(5083595..5084662) Geobacter uraniireducens Rf4 5166468 YP_001233105.1 CDS Gura_4389 NC_009483.1 5085422 5087998 R PFAM: type III restriction enzyme, res subunit; type III restriction enzyme, res subunit complement(5085422..5087998) Geobacter uraniireducens Rf4 5166469 YP_001233106.1 CDS Gura_4390 NC_009483.1 5088184 5089779 R PFAM: DNA methylase N-4/N-6 domain protein; adenine-specific DNA-methyltransferase complement(5088184..5089779) Geobacter uraniireducens Rf4 5166470 YP_001233107.1 CDS Gura_4391 NC_009483.1 5090154 5090633 R hypothetical protein complement(5090154..5090633) Geobacter uraniireducens Rf4 5166929 YP_001233108.1 CDS Gura_4392 NC_009483.1 5090749 5093022 R PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; cell division protein FtsK complement(5090749..5093022) Geobacter uraniireducens Rf4 5166930 YP_001233109.1 CDS Gura_4393 NC_009483.1 5093106 5094782 R PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; beta-lactamase domain-containing protein complement(5093106..5094782) Geobacter uraniireducens Rf4 5166931 YP_001233110.1 CDS Gura_4394 NC_009483.1 5095007 5095405 R hypothetical protein complement(5095007..5095405) Geobacter uraniireducens Rf4 5166902 YP_001233111.1 CDS Gura_4395 NC_009483.1 5095413 5095625 R hypothetical protein complement(5095413..5095625) Geobacter uraniireducens Rf4 5166903 YP_001233112.1 CDS Gura_4396 NC_009483.1 5095600 5096298 R TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(5095600..5096298) Geobacter uraniireducens Rf4 5166904 YP_001233113.1 CDS Gura_4397 NC_009483.1 5096447 5096896 D TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein 5096447..5096896 Geobacter uraniireducens Rf4 5163735 YP_001233114.1 CDS Gura_4398 NC_009483.1 5097068 5097196 D hypothetical protein 5097068..5097196 Geobacter uraniireducens Rf4 5163736 YP_001233115.1 CDS Gura_4399 NC_009483.1 5097248 5097343 D hypothetical protein 5097248..5097343 Geobacter uraniireducens Rf4 5163737 YP_001233116.1 CDS Gura_4400 NC_009483.1 5097347 5098708 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 5097347..5098708 Geobacter uraniireducens Rf4 5163796 YP_001233117.1 CDS Gura_4401 NC_009483.1 5098813 5100900 R PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(5098813..5100900) Geobacter uraniireducens Rf4 5163797 YP_001233118.1 CDS Gura_4402 NC_009483.1 5101211 5104705 R PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases-like; non-specific serine/threonine protein kinase complement(5101211..5104705) Geobacter uraniireducens Rf4 5163798 YP_001233119.1 CDS Gura_4403 NC_009483.1 5104823 5105740 D PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 5104823..5105740 Geobacter uraniireducens Rf4 5163837 YP_001233120.1 CDS Gura_4404 NC_009483.1 5105796 5106908 R hypothetical protein complement(5105796..5106908) Geobacter uraniireducens Rf4 5163838 YP_001233121.1 CDS Gura_4405 NC_009483.1 5106924 5108453 R hypothetical protein complement(5106924..5108453) Geobacter uraniireducens Rf4 5163839 YP_001233122.1 CDS Gura_4406 NC_009483.1 5108690 5111146 D TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; 1A family penicillin-binding protein 5108690..5111146 Geobacter uraniireducens Rf4 5163265 YP_001233123.1 CDS Gura_4407 NC_009483.1 5111386 5111670 D PFAM: histone family protein DNA-binding protein; histone family protein DNA-binding protein 5111386..5111670 Geobacter uraniireducens Rf4 5163266 YP_001233124.1 CDS Gura_4408 NC_009483.1 5111936 5112271 D hypothetical protein 5111936..5112271 Geobacter uraniireducens Rf4 5163267 YP_001233125.1 CDS Gura_4409 NC_009483.1 5112275 5113717 D PFAM: pyruvate kinase; pyruvate kinase 5112275..5113717 Geobacter uraniireducens Rf4 5162813 YP_001233126.1 CDS Gura_4410 NC_009483.1 5113729 5114853 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 5113729..5114853 Geobacter uraniireducens Rf4 5162814 YP_001233127.1 CDS Gura_4411 NC_009483.1 5114909 5115814 D PFAM: Auxin Efflux Carrier; auxin efflux carrier 5114909..5115814 Geobacter uraniireducens Rf4 5162815 YP_001233128.1 CDS prfC NC_009483.1 5115851 5117434 R stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 complement(5115851..5117434) Geobacter uraniireducens Rf4 5164894 YP_001233129.1 CDS Gura_4413 NC_009483.1 5117868 5118629 D TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; TatD family hydrolase 5117868..5118629 Geobacter uraniireducens Rf4 5164895 YP_001233130.1 CDS Gura_4414 NC_009483.1 5118706 5119476 D PFAM: UBA/THIF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 5118706..5119476 Geobacter uraniireducens Rf4 5164896 YP_001233131.1 CDS Gura_4415 NC_009483.1 5119566 5120063 D PFAM: Rubrerythrin; rubrerythrin 5119566..5120063 Geobacter uraniireducens Rf4 5165044 YP_001233132.1 CDS Gura_4416 NC_009483.1 5120060 5120362 D hypothetical protein 5120060..5120362 Geobacter uraniireducens Rf4 5165045 YP_001233133.1 CDS Gura_4417 NC_009483.1 5120628 5121383 R PFAM: Lytic transglycosylase, catalytic; lytic transglycosylase complement(5120628..5121383) Geobacter uraniireducens Rf4 5165046 YP_001233134.1 CDS Gura_4418 NC_009483.1 5121392 5122792 R PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; two component sigma-54 specific Fis family transcriptional regulator complement(5121392..5122792) Geobacter uraniireducens Rf4 5165467 YP_001233135.1 CDS Gura_4419 NC_009483.1 5123130 5123627 D PFAM: CheW domain protein; putative CheW protein 5123130..5123627 Geobacter uraniireducens Rf4 5165468 YP_001233136.1 CDS Gura_4420 NC_009483.1 5123683 5125479 D PFAM: CheW domain protein; ATP-binding region, ATPase domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; CheA signal transduction histidine kinase 5123683..5125479 Geobacter uraniireducens Rf4 5165469 YP_001233137.1 CDS Gura_4421 NC_009483.1 5125554 5126387 D PFAM: MCP methyltransferase, CheR-type; protein-glutamate O-methyltransferase 5125554..5126387 Geobacter uraniireducens Rf4 5165931 YP_001233138.1 CDS Gura_4422 NC_009483.1 5126399 5127301 D PFAM: metal-dependent phosphohydrolase, HD sub domain; HDOD; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 5126399..5127301 Geobacter uraniireducens Rf4 5165932 YP_001233139.1 CDS Gura_4423 NC_009483.1 5127307 5128380 D PFAM: CheB methylesterase; response regulator receiver; response regulator receiver modulated CheB methylesterase 5127307..5128380 Geobacter uraniireducens Rf4 5165933 YP_001233140.1 CDS Gura_4424 NC_009483.1 5128384 5128707 R hypothetical protein complement(5128384..5128707) Geobacter uraniireducens Rf4 5165646 YP_001233141.1 CDS Gura_4425 NC_009483.1 5128774 5129505 R hypothetical protein complement(5128774..5129505) Geobacter uraniireducens Rf4 5165647 YP_001233142.1 CDS Gura_4426 NC_009483.1 5129762 5130421 R TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; methyltransferase GidB complement(5129762..5130421) Geobacter uraniireducens Rf4 5165648 YP_001233143.1 CDS Gura_4427 NC_009483.1 5130418 5132292 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(5130418..5132292) Geobacter uraniireducens Rf4 5163162 YP_001233144.1 CDS trmE NC_009483.1 5132417 5133784 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(5132417..5133784) Geobacter uraniireducens Rf4 5163163 YP_001233145.1 CDS Gura_4429 NC_009483.1 5133809 5135395 R PFAM: 60 kDa inner membrane insertion protein; 60 kDa inner membrane insertion protein complement(5133809..5135395) Geobacter uraniireducens Rf4 5163164 YP_001233146.1 CDS Gura_4430 NC_009483.1 5135416 5135628 R PFAM: protein of unknown function DUF37; hypothetical protein complement(5135416..5135628) Geobacter uraniireducens Rf4 5166501 YP_001233147.1 CDS rnpA NC_009483.1 5135630 5135971 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(5135630..5135971) Geobacter uraniireducens Rf4 5166502 YP_001233148.1 CDS rpmH NC_009483.1 5135978 5136127 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(5135978..5136127) Geobacter uraniireducens Rf4 5166503 Gura_R0001 tRNA Gura_R0001 NC_009483.1 65614 65701 D tRNA-Ser 65614..65701 Geobacter uraniireducens Rf4 5165022 Gura_R0002 tRNA Gura_R0002 NC_009483.1 179974 180049 R tRNA-Ala complement(179974..180049) Geobacter uraniireducens Rf4 5165917 Gura_R0003 tRNA Gura_R0003 NC_009483.1 348560 348645 D tRNA-Ser 348560..348645 Geobacter uraniireducens Rf4 5166482 Gura_R0004 tRNA Gura_R0004 NC_009483.1 348722 348814 D tRNA-Ser 348722..348814 Geobacter uraniireducens Rf4 5164539 Gura_R0005 tRNA Gura_R0005 NC_009483.1 349356 349432 D tRNA-Arg 349356..349432 Geobacter uraniireducens Rf4 5166287 Gura_R0006 tRNA Gura_R0006 NC_009483.1 349504 349580 D tRNA-Arg 349504..349580 Geobacter uraniireducens Rf4 5166288 Gura_R0007 tRNA Gura_R0007 NC_009483.1 402849 402924 R tRNA-Phe complement(402849..402924) Geobacter uraniireducens Rf4 5163625 Gura_R0008 tRNA Gura_R0008 NC_009483.1 792083 792158 D tRNA-Lys 792083..792158 Geobacter uraniireducens Rf4 5163370 Gura_R0009 tRNA Gura_R0009 NC_009483.1 792160 792237 D tRNA-Glu 792160..792237 Geobacter uraniireducens Rf4 5163371 Gura_R0010 tRNA Gura_R0010 NC_009483.1 1255031 1255106 D tRNA-Thr 1255031..1255106 Geobacter uraniireducens Rf4 5165883 Gura_R0011 tRNA Gura_R0011 NC_009483.1 1255134 1255218 D tRNA-Tyr 1255134..1255218 Geobacter uraniireducens Rf4 5166265 Gura_R0012 tRNA Gura_R0012 NC_009483.1 1255330 1255406 D tRNA-Gly 1255330..1255406 Geobacter uraniireducens Rf4 5166405 Gura_R0013 tRNA Gura_R0013 NC_009483.1 1255420 1255495 D tRNA-Thr 1255420..1255495 Geobacter uraniireducens Rf4 5166406 Gura_R0014 tRNA Gura_R0014 NC_009483.1 1256994 1257070 D tRNA-Trp 1256994..1257070 Geobacter uraniireducens Rf4 5165125 Gura_R0016 tRNA Gura_R0016 NC_009483.1 1304346 1304422 D tRNA-Ile 1304346..1304422 Geobacter uraniireducens Rf4 5163622 Gura_R0017 tRNA Gura_R0017 NC_009483.1 1304506 1304581 D tRNA-Ala 1304506..1304581 Geobacter uraniireducens Rf4 5163921 Gura_R0020 tRNA Gura_R0020 NC_009483.1 1701179 1701265 D tRNA-Leu 1701179..1701265 Geobacter uraniireducens Rf4 5164603 Gura_R0021 tRNA Gura_R0021 NC_009483.1 2223058 2223134 D tRNA-Asp 2223058..2223134 Geobacter uraniireducens Rf4 5163158 Gura_R0022 tRNA Gura_R0022 NC_009483.1 2223142 2223217 D tRNA-Val 2223142..2223217 Geobacter uraniireducens Rf4 5163159 Gura_R0023 tRNA Gura_R0023 NC_009483.1 2223289 2223365 D tRNA-Asp 2223289..2223365 Geobacter uraniireducens Rf4 5165441 Gura_R0024 tRNA Gura_R0024 NC_009483.1 2363728 2363802 R tRNA-Val complement(2363728..2363802) Geobacter uraniireducens Rf4 5166096 Gura_R0025 tRNA Gura_R0025 NC_009483.1 2407900 2407986 R tRNA-Leu complement(2407900..2407986) Geobacter uraniireducens Rf4 5164489 Gura_R0026 tRNA Gura_R0026 NC_009483.1 2409019 2409105 R tRNA-Leu complement(2409019..2409105) Geobacter uraniireducens Rf4 5163997 Gura_R0028 tRNA Gura_R0028 NC_009483.1 2511536 2511611 R tRNA-Ala complement(2511536..2511611) Geobacter uraniireducens Rf4 5165552 Gura_R0029 tRNA Gura_R0029 NC_009483.1 2511744 2511830 D tRNA-Leu 2511744..2511830 Geobacter uraniireducens Rf4 5165553 Gura_R0030 tRNA Gura_R0030 NC_009483.1 2581140 2581214 R tRNA-Gly complement(2581140..2581214) Geobacter uraniireducens Rf4 5164482 Gura_R0031 tRNA Gura_R0031 NC_009483.1 2597086 2597160 R tRNA-Glu complement(2597086..2597160) Geobacter uraniireducens Rf4 5162622 Gura_R0032 tRNA Gura_R0032 NC_009483.1 2597262 2597335 R tRNA-Gln complement(2597262..2597335) Geobacter uraniireducens Rf4 5162623 Gura_R0033 tRNA Gura_R0033 NC_009483.1 2618934 2619018 R tRNA-Leu complement(2618934..2619018) Geobacter uraniireducens Rf4 5162701 Gura_R0034 tRNA Gura_R0034 NC_009483.1 2619073 2619148 R tRNA-His complement(2619073..2619148) Geobacter uraniireducens Rf4 5162702 Gura_R0035 tRNA Gura_R0035 NC_009483.1 2619162 2619238 R tRNA-Arg complement(2619162..2619238) Geobacter uraniireducens Rf4 5165403 Gura_R0036 tRNA Gura_R0036 NC_009483.1 2619246 2619323 R tRNA-Pro complement(2619246..2619323) Geobacter uraniireducens Rf4 5163434 Gura_R0037 tRNA Gura_R0037 NC_009483.1 2871871 2871945 R tRNA-Cys complement(2871871..2871945) Geobacter uraniireducens Rf4 5164845 Gura_R0038 tRNA Gura_R0038 NC_009483.1 2956539 2956615 R tRNA-Arg complement(2956539..2956615) Geobacter uraniireducens Rf4 5162639 Gura_R0039 tRNA Gura_R0039 NC_009483.1 3046756 3046832 R tRNA-Pro complement(3046756..3046832) Geobacter uraniireducens Rf4 5163091 Gura_R0040 tRNA Gura_R0040 NC_009483.1 3104664 3104738 R tRNA-Val complement(3104664..3104738) Geobacter uraniireducens Rf4 5165304 Gura_R0041 tRNA Gura_R0041 NC_009483.1 3183675 3183751 R tRNA-Met complement(3183675..3183751) Geobacter uraniireducens Rf4 5166065 Gura_R0042 tRNA Gura_R0042 NC_009483.1 3256431 3256507 R tRNA-Met complement(3256431..3256507) Geobacter uraniireducens Rf4 5162641 Gura_R0043 tRNA Gura_R0043 NC_009483.1 3687251 3687325 R tRNA-Gly complement(3687251..3687325) Geobacter uraniireducens Rf4 5163855 Gura_R0046 tRNA Gura_R0046 NC_009483.1 3816651 3816726 R tRNA-Ala complement(3816651..3816726) Geobacter uraniireducens Rf4 5166379 Gura_R0047 tRNA Gura_R0047 NC_009483.1 3816810 3816886 R tRNA-Ile complement(3816810..3816886) Geobacter uraniireducens Rf4 5166380 Gura_R0049 tRNA Gura_R0049 NC_009483.1 3999819 3999895 D tRNA-Arg 3999819..3999895 Geobacter uraniireducens Rf4 5165148 Gura_R0050 tRNA Gura_R0050 NC_009483.1 4043694 4043787 D tRNA-Sec 4043694..4043787 Geobacter uraniireducens Rf4 5162947 Gura_R0051 tRNA Gura_R0051 NC_009483.1 4309698 4309772 R tRNA-Gln complement(4309698..4309772) Geobacter uraniireducens Rf4 5166680 Gura_R0052 tRNA Gura_R0052 NC_009483.1 4502814 4502889 D tRNA-Thr 4502814..4502889 Geobacter uraniireducens Rf4 5167008 Gura_R0054 tRNA Gura_R0054 NC_009483.1 4633430 4633506 R tRNA-Met complement(4633430..4633506) Geobacter uraniireducens Rf4 5164280 Gura_R0055 tRNA Gura_R0055 NC_009483.1 4943597 4943673 R tRNA-Pro complement(4943597..4943673) Geobacter uraniireducens Rf4 5166093 Gura_R0056 tRNA Gura_R0056 NC_009483.1 5002703 5002793 D tRNA-Ser 5002703..5002793 Geobacter uraniireducens Rf4 5166342 Gura_R0058 tRNA Gura_R0058 NC_009483.1 5031564 5031639 D tRNA-Asn 5031564..5031639 Geobacter uraniireducens Rf4 5165787 Gura_R0015 rRNA Gura_R0015 NC_009483.1 1302601 1304163 D 16S ribosomal RNA 1302601..1304163 Geobacter uraniireducens Rf4 5163621 Gura_R0018 rRNA Gura_R0018 NC_009483.1 1304764 1307747 D 23S ribosomal RNA 1304764..1307747 Geobacter uraniireducens Rf4 5163658 Gura_R0019 rRNA Gura_R0019 NC_009483.1 1307909 1308040 D 5S ribosomal RNA 1307909..1308040 Geobacter uraniireducens Rf4 5163659 Gura_R0044 rRNA Gura_R0044 NC_009483.1 3813193 3813324 R 5S ribosomal RNA complement(3813193..3813324) Geobacter uraniireducens Rf4 5166670 Gura_R0045 rRNA Gura_R0045 NC_009483.1 3813486 3816469 R 23S ribosomal RNA complement(3813486..3816469) Geobacter uraniireducens Rf4 5166671 Gura_R0048 rRNA Gura_R0048 NC_009483.1 3817070 3818632 R 16S ribosomal RNA complement(3817070..3818632) Geobacter uraniireducens Rf4 5165594