-- dump date 20240506_001914 -- class Genbank::Contig -- table contig_comment -- id comment NC_013757.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001867.1.REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at theREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START##REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160 Culture Collection ID :: DSM 43160, ATCC 25078, CBS 237.69, IAMREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160 Culture Collection ID :: DSM 43160, ATCC 25078, CBS 237.69, IAM 14282, IFO 13315, JCM 3152REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160 Culture Collection ID :: DSM 43160, ATCC 25078, CBS 237.69, IAM 14282, IFO 13315, JCM 3152 GOLD Stamp ID :: Gi02257REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160 Culture Collection ID :: DSM 43160, ATCC 25078, CBS 237.69, IAM 14282, IFO 13315, JCM 3152 GOLD Stamp ID :: Gi02257 Funding Program :: DOE-GEBA 2007REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160 Culture Collection ID :: DSM 43160, ATCC 25078, CBS 237.69, IAM 14282, IFO 13315, JCM 3152 GOLD Stamp ID :: Gi02257 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMarkREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160 Culture Collection ID :: DSM 43160, ATCC 25078, CBS 237.69, IAM 14282, IFO 13315, JCM 3152 GOLD Stamp ID :: Gi02257 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Soil from the Amargosa desert in NevadaREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160 Culture Collection ID :: DSM 43160, ATCC 25078, CBS 237.69, IAM 14282, IFO 13315, JCM 3152 GOLD Stamp ID :: Gi02257 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Soil from the Amargosa desert in Nevada Isolation Country :: USAREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160 Culture Collection ID :: DSM 43160, ATCC 25078, CBS 237.69, IAM 14282, IFO 13315, JCM 3152 GOLD Stamp ID :: Gi02257 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Soil from the Amargosa desert in Nevada Isolation Country :: USA Latitude :: 36.48581REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160 Culture Collection ID :: DSM 43160, ATCC 25078, CBS 237.69, IAM 14282, IFO 13315, JCM 3152 GOLD Stamp ID :: Gi02257 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Soil from the Amargosa desert in Nevada Isolation Country :: USA Latitude :: 36.48581 Longitude :: -116.507365REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160 Culture Collection ID :: DSM 43160, ATCC 25078, CBS 237.69, IAM 14282, IFO 13315, JCM 3152 GOLD Stamp ID :: Gi02257 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Soil from the Amargosa desert in Nevada Isolation Country :: USA Latitude :: 36.48581 Longitude :: -116.507365 Oxygen Requirement :: AerobeREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160 Culture Collection ID :: DSM 43160, ATCC 25078, CBS 237.69, IAM 14282, IFO 13315, JCM 3152 GOLD Stamp ID :: Gi02257 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Soil from the Amargosa desert in Nevada Isolation Country :: USA Latitude :: 36.48581 Longitude :: -116.507365 Oxygen Requirement :: Aerobe Cell Shape :: Coccus-shapedREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160 Culture Collection ID :: DSM 43160, ATCC 25078, CBS 237.69, IAM 14282, IFO 13315, JCM 3152 GOLD Stamp ID :: Gi02257 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Soil from the Amargosa desert in Nevada Isolation Country :: USA Latitude :: 36.48581 Longitude :: -116.507365 Oxygen Requirement :: Aerobe Cell Shape :: Coccus-shaped Motility :: NonmotileREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160 Culture Collection ID :: DSM 43160, ATCC 25078, CBS 237.69, IAM 14282, IFO 13315, JCM 3152 GOLD Stamp ID :: Gi02257 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Soil from the Amargosa desert in Nevada Isolation Country :: USA Latitude :: 36.48581 Longitude :: -116.507365 Oxygen Requirement :: Aerobe Cell Shape :: Coccus-shaped Motility :: Nonmotile Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160 Culture Collection ID :: DSM 43160, ATCC 25078, CBS 237.69, IAM 14282, IFO 13315, JCM 3152 GOLD Stamp ID :: Gi02257 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Soil from the Amargosa desert in Nevada Isolation Country :: USA Latitude :: 36.48581 Longitude :: -116.507365 Oxygen Requirement :: Aerobe Cell Shape :: Coccus-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 28CREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160 Culture Collection ID :: DSM 43160, ATCC 25078, CBS 237.69, IAM 14282, IFO 13315, JCM 3152 GOLD Stamp ID :: Gi02257 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Soil from the Amargosa desert in Nevada Isolation Country :: USA Latitude :: 36.48581 Longitude :: -116.507365 Oxygen Requirement :: Aerobe Cell Shape :: Coccus-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram-REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160 Culture Collection ID :: DSM 43160, ATCC 25078, CBS 237.69, IAM 14282, IFO 13315, JCM 3152 GOLD Stamp ID :: Gi02257 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Soil from the Amargosa desert in Nevada Isolation Country :: USA Latitude :: 36.48581 Longitude :: -116.507365 Oxygen Requirement :: Aerobe Cell Shape :: Coccus-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram- Biotic Relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160 Culture Collection ID :: DSM 43160, ATCC 25078, CBS 237.69, IAM 14282, IFO 13315, JCM 3152 GOLD Stamp ID :: Gi02257 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Soil from the Amargosa desert in Nevada Isolation Country :: USA Latitude :: 36.48581 Longitude :: -116.507365 Oxygen Requirement :: Aerobe Cell Shape :: Coccus-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160 Culture Collection ID :: DSM 43160, ATCC 25078, CBS 237.69, IAM 14282, IFO 13315, JCM 3152 GOLD Stamp ID :: Gi02257 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Soil from the Amargosa desert in Nevada Isolation Country :: USA Latitude :: 36.48581 Longitude :: -116.507365 Oxygen Requirement :: Aerobe Cell Shape :: Coccus-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None ##Metadata-END##REFSEQ INFORMATION: The reference sequence is identical to CP001867.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083050 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025345.1-RS_2024_04_19 Annotation Date :: 04/19/2024 13:03:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,133 CDSs (total) :: 5,070 Genes (coding) :: 4,973 CDSs (with protein) :: 4,973 Genes (RNA) :: 63 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 3 Pseudo Genes (total) :: 97 CDSs (without protein) :: 97 Pseudo Genes (ambiguous residues) :: 0 of 97 Pseudo Genes (frameshifted) :: 34 of 97 Pseudo Genes (incomplete) :: 78 of 97 Pseudo Genes (internal stop) :: 13 of 97 Pseudo Genes (multiple problems) :: 23 of 97 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Geodermatophilus obscurus G-20, DSM 43160 Culture Collection ID :: DSM 43160, ATCC 25078, CBS 237.69, IAM 14282, IFO 13315, JCM 3152 GOLD Stamp ID :: Gi02257 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: GeneMark Isolation Site :: Soil from the Amargosa desert in Nevada Isolation Country :: USA Latitude :: 36.48581 Longitude :: -116.507365 Oxygen Requirement :: Aerobe Cell Shape :: Coccus-shaped Motility :: Nonmotile Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None ##Metadata-END## COMPLETENESS: full length.