-- dump date 20240506_001337 -- class Genbank::Contig -- table contig_comment -- id comment NC_011979.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001390.1.REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel KostkaREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376)REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information:REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs:REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.htmlREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: SangerREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10xREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: DraftREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducerREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: NoneREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, SedimentREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: AnaerobeREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shapedREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: MotileREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: NonsporulatingREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: ChemolithotrophREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US.REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,853REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,853 CDSs (total) :: 3,794REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,853 CDSs (total) :: 3,794 Genes (coding) :: 3,771REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,853 CDSs (total) :: 3,794 Genes (coding) :: 3,771 CDSs (with protein) :: 3,771REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,853 CDSs (total) :: 3,794 Genes (coding) :: 3,771 CDSs (with protein) :: 3,771 Genes (RNA) :: 59REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,853 CDSs (total) :: 3,794 Genes (coding) :: 3,771 CDSs (with protein) :: 3,771 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,853 CDSs (total) :: 3,794 Genes (coding) :: 3,771 CDSs (with protein) :: 3,771 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,853 CDSs (total) :: 3,794 Genes (coding) :: 3,771 CDSs (with protein) :: 3,771 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,853 CDSs (total) :: 3,794 Genes (coding) :: 3,771 CDSs (with protein) :: 3,771 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,853 CDSs (total) :: 3,794 Genes (coding) :: 3,771 CDSs (with protein) :: 3,771 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 23REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,853 CDSs (total) :: 3,794 Genes (coding) :: 3,771 CDSs (with protein) :: 3,771 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 23 CDSs (without protein) :: 23REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,853 CDSs (total) :: 3,794 Genes (coding) :: 3,771 CDSs (with protein) :: 3,771 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 23 CDSs (without protein) :: 23 Pseudo Genes (ambiguous residues) :: 0 of 23REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,853 CDSs (total) :: 3,794 Genes (coding) :: 3,771 CDSs (with protein) :: 3,771 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 23 CDSs (without protein) :: 23 Pseudo Genes (ambiguous residues) :: 0 of 23 Pseudo Genes (frameshifted) :: 4 of 23REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,853 CDSs (total) :: 3,794 Genes (coding) :: 3,771 CDSs (with protein) :: 3,771 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 23 CDSs (without protein) :: 23 Pseudo Genes (ambiguous residues) :: 0 of 23 Pseudo Genes (frameshifted) :: 4 of 23 Pseudo Genes (incomplete) :: 19 of 23REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,853 CDSs (total) :: 3,794 Genes (coding) :: 3,771 CDSs (with protein) :: 3,771 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 23 CDSs (without protein) :: 23 Pseudo Genes (ambiguous residues) :: 0 of 23 Pseudo Genes (frameshifted) :: 4 of 23 Pseudo Genes (incomplete) :: 19 of 23 Pseudo Genes (internal stop) :: 1 of 23REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,853 CDSs (total) :: 3,794 Genes (coding) :: 3,771 CDSs (with protein) :: 3,771 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 23 CDSs (without protein) :: 23 Pseudo Genes (ambiguous residues) :: 0 of 23 Pseudo Genes (frameshifted) :: 4 of 23 Pseudo Genes (incomplete) :: 19 of 23 Pseudo Genes (internal stop) :: 1 of 23 Pseudo Genes (multiple problems) :: 1 of 23REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,853 CDSs (total) :: 3,794 Genes (coding) :: 3,771 CDSs (with protein) :: 3,771 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 23 CDSs (without protein) :: 23 Pseudo Genes (ambiguous residues) :: 0 of 23 Pseudo Genes (frameshifted) :: 4 of 23 Pseudo Genes (incomplete) :: 19 of 23 Pseudo Genes (internal stop) :: 1 of 23 Pseudo Genes (multiple problems) :: 1 of 23 CRISPR Arrays :: 1REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,853 CDSs (total) :: 3,794 Genes (coding) :: 3,771 CDSs (with protein) :: 3,771 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 23 CDSs (without protein) :: 23 Pseudo Genes (ambiguous residues) :: 0 of 23 Pseudo Genes (frameshifted) :: 4 of 23 Pseudo Genes (incomplete) :: 19 of 23 Pseudo Genes (internal stop) :: 1 of 23 Pseudo Genes (multiple problems) :: 1 of 23 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001390.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001414 Source DNA and bacteria available from Joel Kostka (jkostka@ocean.fsu.edu) Contacts: Joel Kostka (jkostka@ocean.fsu.edu) David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376) Meta information: Organism display name: Geobacter sp FRC-32 Culture Collection IDs: GOLD ID: Gi00944 http://genomesonline.org/GOLD_CARDS/Gi00944.html Sequencing Platforms: Sanger Sequencing Coverage: 10x Sequencing Status: Draft Phenotypes: Iron reducer, Uranium reducer Diseases: None Habitat: Fresh water, Soil, Sediment Oxygen Requirement: Anaerobe Cell Shape: Rod-shaped Motility: Motile Sporulation: Nonsporulating Energy Source: Chemolithotroph Temperature Range: Mesophile Biotic Relationship: Free living Isolation: Uranium-contaminated subsurface at US. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 01/24/2024 00:50:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,853 CDSs (total) :: 3,794 Genes (coding) :: 3,771 CDSs (with protein) :: 3,771 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 23 CDSs (without protein) :: 23 Pseudo Genes (ambiguous residues) :: 0 of 23 Pseudo Genes (frameshifted) :: 4 of 23 Pseudo Genes (incomplete) :: 19 of 23 Pseudo Genes (internal stop) :: 1 of 23 Pseudo Genes (multiple problems) :: 1 of 23 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## COMPLETENESS: full length.