-- dump date   	20140619_103225
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_002274418.1	KEGG: gdi:GDI1771 putative chromosomal replication initiator protein DnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA domain; Chromosomal replication initiator DnaA; SMART: AAA ATPase
YP_002274419.1	binds the polymerase to DNA and acts as a sliding clamp
YP_002274420.1	Required for DNA replication; binds preferentially to single-stranded, linear DNA
YP_002274421.1	KEGG: gdi:GDI1774 putative DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II
YP_002274422.1	KEGG: gdi:GDI1775 hypothetical protein
YP_002274423.1	TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gdi:GDI1776 phosphoglycolate phosphatase
YP_002274424.1	forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis
YP_002274425.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
YP_002274426.1	TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: gdi:GDI1779 thiamine biosynthesis oxidoreductase ThiO
YP_002274427.1	TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: gdi:GDI1780 putative thiamine biosynthesis protein ThiS
YP_002274428.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
YP_002274429.1	KEGG: gdi:GDI1782 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase
YP_002274430.1	PFAM: cyclic nucleotide-binding; sodium/hydrogen exchanger; KEGG: gdi:GDI1784 putative Na+/H+ antiporter
YP_002274431.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: gdi:GDI1785 putative isoquinoline 1-oxidoreductase subunit alpha
YP_002274432.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: gdi:GDI1786 putative isoquinoline 1-oxidoreductase subunit beta
YP_002274433.1	KEGG: gdi:GDI1787 alcohol dehydrogenase cytochrome c subunit precursor
YP_002274434.1	PFAM: MscS Mechanosensitive ion channel; KEGG: gdi:GDI1788 putative mechanosensitive ion channel
YP_002274435.1	PFAM: amino acid permease-associated region; KEGG: gdi:GDI1789 putative cationic amino acid transporter
YP_002274436.1	KEGG: gdi:GDI1790 putative acetylhydrolase
YP_002274437.1	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
YP_002274438.1	PFAM: Mammalian cell entry related domain protein; KEGG: gdi:GDI1792 putative toluene tolerance protein
YP_002274439.1	KEGG: gdi:GDI1793 putative exported protein
YP_002274440.1	KEGG: gdi:GDI1794 hypothetical protein
YP_002274441.1	TIGRFAM: lytic murein transglycosylase; KEGG: gdi:GDI1795 putative membrane-bound lytic murein transglycosylase B precursor
YP_002274442.1	PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: gdi:GDI1796 putative rare lipoprotein A precursor
YP_002274443.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: gdi:GDI1797 putative penicillin-binding protein 5 precursor
YP_002274444.1	PFAM: thymidylate kinase; KEGG: gdi:GDI1798 putative thymidylate kinase
YP_002274445.1	KEGG: gdi:GDI1799 putative DNA polymerase III delta' subunit
YP_002274446.1	TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); KEGG: gdi:GDI1800 methionyl-tRNA synthetase
YP_002274447.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: gdi:GDI1801 putative deoxyribonuclease
YP_002274448.1	PFAM: beta-lactamase domain protein; KEGG: gdi:GDI1802 putative beta-lactamase-like
YP_002274449.1	PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: gdi:GDI1803 PrkA serine protein kinase
YP_002274450.1	PFAM: protein of unknown function DUF444; KEGG: gdi:GDI1804 hypothetical protein
YP_002274451.1	PFAM: SpoVR family protein; KEGG: gdi:GDI1805 putative stage V sporulation protein R
YP_002274452.1	PFAM: methylamine dehydrogenase heavy subunit; KEGG: gdi:GDI1806 putative methylamine dehydrogenase heavy chain precursor
YP_002274453.1	KEGG: gdi:GDI1807 putative methylamine dehydrogenase light chain precursor; TIGRFAM: methylamine dehydrogenase light chain; PFAM: methylamine dehydrogenase light chain domain protein
YP_002274454.1	PFAM: cytochrome c class I; KEGG: gdi:GDI1808 putative cytochrome c-552
YP_002274455.1	KEGG: gdi:GDI1809 putative cytochrome c-552
YP_002274456.1	PFAM: nucleoside 2-deoxyribosyltransferase; KEGG: gdi:GDI1810 putative nucleoside 2-deoxyribosyltransferase
YP_002274457.1	KEGG: gdi:GDI1811 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase
YP_002274458.1	PFAM: Fmu (Sun) domain protein; KEGG: gdi:GDI1812 putative ribosomal RNA small subunit methyltransferase B
YP_002274459.1	PFAM: sodium/hydrogen exchanger; KEGG: gdi:GDI1813 putative cell volume regulation protein A
YP_002274460.1	KEGG: gdi:GDI1814 hypothetical protein
YP_002274461.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gdi:GDI1815 putative DNA-binding response regulator MtrA
YP_002274462.1	TIGRFAM: exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: gdi:GDI1816 putative exodeoxyribonuclease III protein
YP_002274463.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_002274464.1	TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: gdi:GDI1819 putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_002274465.1	KEGG: gdi:GDI1820 hypothetical protein
YP_002274466.1	TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: gdi:GDI1821 putative molybdopterin-converting factor subunit 1
YP_002274467.1	PFAM: molybdopterin biosynthesis MoaE protein; KEGG: gdi:GDI1822 putative molybdopterin-converting factor subunit 2
YP_002274468.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_002274469.1	B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE
YP_002274470.1	KEGG: gdi:GDI1825 putative methyltransferase
YP_002274471.1	PFAM: Polyprenyl synthetase; KEGG: gdi:GDI1826 putative octaprenyl-diphosphate synthase
YP_002274472.1	KEGG: gdi:GDI1827 putative glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase
YP_002274473.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_002274474.1	KEGG: gdi:GDI1829 hypothetical protein
YP_002274475.1	KEGG: gdi:GDI1830 citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase
YP_002274476.1	PFAM: Phosphoglycerate mutase; KEGG: gdi:GDI1831 putative phosphoglycerate mutase
YP_002274477.1	TIGRFAM: chorismate mutase; PFAM: Chorismate mutase; KEGG: gdi:GDI1832 putative chorismate mutase
YP_002274478.1	PFAM: metallophosphoesterase; KEGG: gdi:GDI1833 putative phosphoesterases
YP_002274479.1	KEGG: gdi:GDI1834 hypothetical protein
YP_002274480.1	KEGG: gdi:GDI1836 acetyl-CoA hydrolase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase
YP_002274481.1	PFAM: SMC domain protein; KEGG: gdi:GDI1837 putative chromosome segregation protein SMC
YP_002274482.1	PFAM: DSBA oxidoreductase; KEGG: gdi:GDI1838 thioredoxin protein
YP_002274483.1	PFAM: Bile acid:sodium symporter; KEGG: gdi:GDI1839 putative transporter protein
YP_002274484.1	PFAM: CBS domain containing protein; transporter-associated region; KEGG: gdi:GDI1840 putative magnesium and cobalt efflux protein CorC
YP_002274485.1	PFAM: protein of unknown function UPF0054; KEGG: gdi:GDI1841 hypothetical protein
YP_002274486.1	PFAM: PhoH family protein; KEGG: gdi:GDI1842 putative PhoH-like protein
YP_002274487.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
YP_002274488.1	PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: gdi:GDI1844 putative surface antigen
YP_002274489.1	PFAM: response regulator receiver; KEGG: gdi:GDI1847 putative two-component response regulator
YP_002274490.1	PFAM: fatty acid hydroxylase; KEGG: gdi:GDI1848 hypothetical protein
YP_002274491.1	PFAM: transmembrane pair domain protein; KEGG: gdi:GDI1849 hypothetical protein
YP_002274492.1	PFAM: transcription factor CarD; KEGG: gdi:GDI1850 transcriptional regulator, CarD family
YP_002274493.1	PFAM: protein of unknown function UPF0187; KEGG: gdi:GDI1851 hypothetical protein
YP_002274494.1	TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI1852 putative alcohol dehydrogenase class 3
YP_002274495.1	KEGG: gdi:GDI1853 esterase protein; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase
YP_002274496.1	PFAM: protein of unknown function UPF0047; KEGG: gdi:GDI1854 hypothetical protein
YP_002274497.1	KEGG: gdi:GDI1855 putative tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib
YP_002274498.1	PFAM: peptidylprolyl isomerase FKBP-type; KEGG: gdi:GDI1856 putative peptidyl-prolyl cis-trans isomerase Mip precursor
YP_002274499.1	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming
YP_002274500.1	TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: gdi:GDI1858 hypothetical protein
YP_002274501.1	TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: gdi:GDI1859 putative hemolysin A
YP_002274502.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
YP_002274503.1	PFAM: Polyprenyl synthetase; KEGG: gdi:GDI1861 geranyltranstransferase
YP_002274504.1	TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: gdi:GDI1862 putative exodeoxyribonuclease VII small subunit
YP_002274505.1	PFAM: SirA family protein; KEGG: gdi:GDI1863 putative sulfurtransferase TusA
YP_002274506.1	PFAM: ROK family protein; KEGG: gdi:GDI1864 glucokinase protein
YP_002274507.1	PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: gdi:GDI1865 putative ribosomal RNA large subunit methyltransferase J
YP_002274508.1	PFAM: Ppx/GppA phosphatase; KEGG: gdi:GDI1866 exopolyphosphatase protein
YP_002274509.1	KEGG: gdi:GDI1867 putative signalling protein, GGDEF family; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_002274510.1	KEGG: gdi:GDI1869 hypothetical protein
YP_002274511.1	KEGG: gdi:GDI1871 hypothetical protein
YP_002274512.1	KEGG: gdi:GDI1873 hypothetical protein
YP_002274513.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
YP_002274514.1	PFAM: inositol monophosphatase; KEGG: gdi:GDI1875 inositol-1-monophosphatase
YP_002274515.1	PFAM: cytochrome c class I; KEGG: gdi:GDI1876 putative cytochrome c homolog
YP_002274516.1	PFAM: acylneuraminate cytidylyltransferase; KEGG: gdi:GDI1877 putative 3-deoxy-manno-octulosonate cytidylyltransferase
YP_002274517.1	catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis
YP_002274518.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
YP_002274519.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_002274520.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: gdi:GDI1881 cold shock-like protein CspE
YP_002274521.1	KEGG: gdi:GDI1883 hypothetical protein
YP_002274522.1	PFAM: helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: gdi:GDI1884 putative ATP-dependent DNA helicase RecG
YP_002274523.1	PFAM: protein of unknown function DUF339; KEGG: gdi:GDI1885 hypothetical protein
YP_002274524.1	KEGG: gdi:GDI1886 putatve transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases
YP_002274525.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI1887 3-oxoacyl-[acyl-carrier-protein] reductase
YP_002274526.1	KEGG: gdi:GDI1888 hypothetical protein
YP_002274527.1	KEGG: gdi:GDI1889 hypothetical protein
YP_002274528.1	KEGG: gdi:GDI1890 putative hydrolase protein
YP_002274529.1	PFAM: Pyridoxal-dependent decarboxylase; KEGG: gdi:GDI1891 putative tyrosine decarboxylase
YP_002274530.1	KEGG: gdi:GDI1892 putative cobalamin biosynthesis protein CobT; TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase CobT subunit; SMART: von Willebrand factor type A
YP_002274531.1	KEGG: gdi:GDI1893 putative aerobic cobaltochelatase CobS; TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities AAA_5
YP_002274532.1	PFAM: heat shock protein DnaJ domain protein; KEGG: gdi:GDI1894 putative chaperone protein DnaJ
YP_002274533.1	PFAM: BolA family protein; KEGG: gdi:GDI1895 BolA-like protein
YP_002274534.1	PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: gdi:GDI1896 putative outer membrane lipoprotein carrier protein LolA
YP_002274535.1	lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein
YP_002274536.1	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: gdi:GDI1898 UTP--glucose-1-phosphate uridylyltransferase
YP_002274537.1	PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: gdi:GDI1899 phosphomannomutase
YP_002274538.1	KEGG: gdi:GDI1900 hypothetical protein
YP_002274539.1	KEGG: gdi:GDI1901 putative molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_002274540.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: gdi:GDI1902 methyltransferase
YP_002274541.1	KEGG: gdi:GDI1903 putative phosphoribosyltransferase
YP_002274542.1	TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: gdi:GDI1904 glutaredoxin-3
YP_002274543.1	PFAM: protein of unknown function DUF1178; KEGG: gdi:GDI1905 hypothetical protein
YP_002274544.1	KEGG: gdi:GDI1906 hypothetical protein
YP_002274545.1	KEGG: gdi:GDI1907 putative 6-phosphogluconolactonase
YP_002274546.1	Involved in ubiquinone biosynthesis
YP_002274547.1	KEGG: gdi:GDI1909 aspartokinase protein; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein
YP_002274548.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: gdi:GDI1910 putative 2-nitropropane dioxygenase
YP_002274549.1	KEGG: gdi:GDI1911 hypothetical protein
YP_002274550.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
YP_002274551.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_002274552.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_002274553.1	KEGG: gdi:GDI1916 hypothetical protein
YP_002274554.1	TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; KEGG: gdi:GDI1917 putative HemK homolog protein
YP_002274555.1	KEGG: gox:GOX0029 hypothetical protein
YP_002274556.1	catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate
YP_002274557.1	KEGG: gdi:GDI1920 putative 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; aminotransferase class-III
YP_002274558.1	KEGG: gdi:GDI1921 hypothetical protein
YP_002274559.1	TIGRFAM: dethiobiotin synthase; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: gdi:GDI1922 putative biotin synthesis protein
YP_002274560.1	Represses a number of genes involved in the response to DNA damage
YP_002274561.1	TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: gdi:GDI1924 putative molybdopterin biosynthesis protein MoeA
YP_002274562.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
YP_002274563.1	PFAM: Septum formation initiator; KEGG: gdi:GDI1926 putative septum formation initiator protein
YP_002274564.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_002274565.1	KEGG: gdi:GDI1928 hypothetical protein
YP_002274566.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
YP_002274567.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_002274568.1	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: gdi:GDI1931 protein translocase subunit SecG
YP_002274569.1	PFAM: triosephosphate isomerase; KEGG: gdi:GDI1932 putative triosephosphate isomerase
YP_002274570.1	KEGG: gdi:GDI1933 peptidyl-prolyl cis-trans isomerase D
YP_002274571.1	KEGG: gdi:GDI1934 anthranilate synthase component 1; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like
YP_002274572.1	TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: gdi:GDI1935 putative mnthranilate synthase component 2
YP_002274573.1	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_002274574.1	PFAM: Indole-3-glycerol phosphate synthase; KEGG: gdi:GDI1937 putative indole-3-glycerol phosphate synthase
YP_002274575.1	TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: gdi:GDI1938 molybdenum cofactor biosynthesis protein C
YP_002274576.1	KEGG: gdi:GDI1939 pyruvate dehydrogenase E1 component subunit alpha; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component
YP_002274577.1	catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase
YP_002274578.1	KEGG: gdi:GDI1941 dihydrolipoamid acetyltransferase component of pyruvate dehydrogenase complex; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein
YP_002274579.1	TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: gdi:GDI1942 putative dihydrolipoyl dehydrogenase
YP_002274580.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_002274581.1	PFAM: cyclase/dehydrase; KEGG: gdi:GDI1944 cyclase/dehydrase protein
YP_002274582.1	KEGG: gdi:GDI1945 hypothetical protein
YP_002274583.1	PFAM: TOBE domain protein; KEGG: gdi:GDI1946 putative molybdenum transport protein ModE
YP_002274584.1	PFAM: transposase mutator type; KEGG: gdi:GDI2780 putative transposase
YP_002274585.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3864 putative transposase
YP_002274586.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3822 putative transposase
YP_002274587.1	PFAM: chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein; KEGG: gdi:GDI1947 putative chemoreceptor McpA (methyl-accepting chemotaxis protein)
YP_002274588.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI1948 putative TonB-dependent receptor
YP_002274589.1	PFAM: CinA domain protein; KEGG: gdi:GDI1950 putative CinA-like
YP_002274590.1	PFAM: phosphatidylglycerophosphatase A; KEGG: gdi:GDI1951 putative phosphatidylglycerophosphatase
YP_002274591.1	PFAM: Lytic transglycosylase catalytic; Tetratricopeptide TPR_4; KEGG: gdi:GDI1952 putative soluble lytic murein transglycosylase precursor
YP_002274592.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
YP_002274593.1	PFAM: protein of unknown function DUF833; KEGG: gdi:GDI1955 hypothetical protein
YP_002274594.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
YP_002274595.1	TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: gdi:GDI1957 putative phosphoribosylformylglycinamidine synthase
YP_002274596.1	KEGG: gdi:GDI1958 hypothetical protein
YP_002274597.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_002274598.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_002274599.1	PFAM: BolA family protein; KEGG: gdi:GDI1961 putative BolA protein
YP_002274600.1	TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: gdi:GDI1962 putative monothiol glutaredoxin
YP_002274601.1	KEGG: gdi:GDI1963 hypothetical protein
YP_002274602.1	PFAM: protein of unknown function UPF0102; KEGG: gdi:GDI1964 hypothetical protein
YP_002274603.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: gdi:GDI1965 putative cardiolipin synthetase 1
YP_002274604.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: gdi:GDI1966 putative endonuclease/exonuclease/phosphatase family
YP_002274605.1	PFAM: protein of unknown function UPF0118; KEGG: gdi:GDI1967 putative inner membrane protein
YP_002274606.1	PFAM: Rhodanese domain protein; KEGG: gdi:GDI1968 3-mercaptopyruvate sulfurtransferase
YP_002274607.1	TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: gdi:GDI1969 putative cystathionine beta-lyase
YP_002274608.1	PFAM: beta-lactamase; KEGG: gdi:GDI1971 putative beta-lactamase precursor
YP_002274609.1	KEGG: gdi:GDI1972 putative Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase
YP_002274610.1	PFAM: helix-turn-helix domain protein; KEGG: gdi:GDI1973 putative HTH-type transcriptional regulator
YP_002274611.1	KEGG: gdi:GDI1974 hypothetical protein
YP_002274612.1	PFAM: GCN5-related N-acetyltransferase; KEGG: pfl:PFL_4654 acetyltransferase, GNAT family family
YP_002274613.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: gdi:GDI1975 putative transcriptional regulator NmrA-like
YP_002274614.1	KEGG: gdi:GDI3803 putative transposase
YP_002274615.1	KEGG: gdi:GDI1976 hypothetical protein
YP_002274616.1	PFAM: protein of unknown function DUF1700; KEGG: gdi:GDI1977 hypothetical protein
YP_002274617.1	PFAM: transcriptional regulator PadR family protein; KEGG: gdi:GDI1978 putative transcriptional regulator, PadR-like family
YP_002274618.1	KEGG: gdi:GDI1981 hypothetical protein
YP_002274619.1	TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; KEGG: gdi:GDI1982 hypothetical protein
YP_002274620.1	PFAM: DNA repair protein RadC; KEGG: gdi:GDI1985 putative DNA repair protein RadC
YP_002274621.1	PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gdi:GDI1986 putative phosphoglycolate phosphatase
YP_002274622.1	PFAM: DNA repair protein RadC; KEGG: gdi:GDI1987 putative DNA repair protein RadC
YP_002274623.1	PFAM: UvrD/REP helicase; KEGG: gdi:GDI1988 putative DNA helicase II
YP_002274624.1	PFAM: ribosomal L11 methyltransferase; KEGG: gdi:GDI1989 putative ribosomal protein L11 methyltransferase
YP_002274625.1	PFAM: peptidase M24; KEGG: gdi:GDI1990 peptidase M24
YP_002274626.1	PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: gdi:GDI1991 isocitrate dehydrogenase
YP_002274627.1	TIGRFAM: hydroxyisourate hydrolase; OHCU decarboxylase; PFAM: Transthyretin; KEGG: gdi:GDI1992 hypothetical protein
YP_002274628.1	KEGG: gdi:GDI1993 putative polysaccharide deacetylase; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase
YP_002274629.1	PFAM: aminotransferase class V; KEGG: gdi:GDI1994 putative serine-pyruvate aminotransferase
YP_002274630.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
YP_002274631.1	PFAM: gamma-glutamyltranspeptidase; KEGG: gdi:GDI1996 putative gamma-glutamyltranspeptidase precursor
YP_002274632.1	TIGRFAM: amidohydrolase, AtzE family; PFAM: Amidase; KEGG: gdi:GDI1997 putative glutamyl-tRNA(Gln) amidotransferase subunit A
YP_002274633.1	KEGG: gdi:GDI1998 hypothetical protein
YP_002274634.1	KEGG: gdi:GDI1999 hypothetical protein
YP_002274635.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI2000 putative transcriptional regulator, LysR family
YP_002274636.1	TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: gdi:GDI2001 putative xanthine dehydrogenase chaperone
YP_002274637.1	KEGG: gdi:GDI2002 putative xanthine dehydrogenase/oxidase; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding
YP_002274638.1	TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: gdi:GDI2003 putative xanthine dehydrogenase, XdhA
YP_002274639.1	catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position
YP_002274640.1	KEGG: gdi:GDI2005 putative N-carbamoyl-L-amino acid amidohydrolase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_002274641.1	catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate
YP_002274642.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: gdi:GDI2007 putative allantoin permease
YP_002274643.1	PFAM: CDP-diacylglycerol pyrophosphatase; KEGG: gdi:GDI2008 putative CDP-diacylglycerol pyrophosphatase
YP_002274644.1	PFAM: Ppx/GppA phosphatase; KEGG: gdi:GDI2009 putative guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase
YP_002274645.1	catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate
YP_002274646.1	PFAM: Chromosomal replication initiator DnaA; SMART: AAA ATPase; KEGG: gdi:GDI2011 putative DNA replication
YP_002274647.1	KEGG: gdi:GDI2012 putative phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein
YP_002274648.1	glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate
YP_002274649.1	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
YP_002274650.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI2015 putative ABC transporter ATP-binding protein
YP_002274651.1	PFAM: outer membrane efflux protein; KEGG: gdi:GDI2016 putative outer membrane protein
YP_002274652.1	KEGG: gdi:GDI2017 putative multidrug resistance protein MdtO
YP_002274653.1	with MdtO and MdtP is involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride
YP_002274654.1	KEGG: bxe:Bxe_B2118 hypothetical protein
YP_002274655.1	KEGG: gdi:GDI2019 hypothetical protein
YP_002274656.1	PFAM: protein of unknown function UPF0118; KEGG: gdi:GDI2020 hypothetical protein
YP_002274657.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gdi:GDI2021 putative hydrolase protein
YP_002274658.1	KEGG: gdi:GDI2022 hypothetical protein
YP_002274659.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: gdi:GDI2023 putative aminotransferase protein
YP_002274660.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: gdi:GDI2024 putative capsular polysaccharide biosynthesis protein CapD
YP_002274661.1	PFAM: glycosyl transferase family 4; KEGG: gdi:GDI2025 putative glycosyl transferase
YP_002274662.1	KEGG: gdi:GDI2026 hypothetical protein
YP_002274663.1	PFAM: regulatory protein MarR; KEGG: gdi:GDI2027 putative transcriptional regulator, MarR family
YP_002274664.1	PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: gdi:GDI2028 putative cytosol aminopeptidase
YP_002274665.1	PFAM: helicase domain protein; KEGG: gdi:GDI2029 putative helicase
YP_002274666.1	PFAM: RNA-binding S4 domain protein; KEGG: gdi:GDI2030 putative RNA-binding S4
YP_002274667.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gdi:GDI2031 putative ferredoxin
YP_002274668.1	TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: gdi:GDI2032 putative cytochrome o ubiquinol oxidase protein CyoD
YP_002274669.1	TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: gdi:GDI2033 putative cytochrome o ubiquinol oxidase subunit 3
YP_002274670.1	KEGG: gdi:GDI2034 ubiquinol oxidase subunit 1; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I
YP_002274671.1	TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: gdi:GDI2035 ubiquinol oxidase subunit 2 precursor
YP_002274672.1	PFAM: protein of unknown function UPF0005; KEGG: gdi:GDI2037 hypothetical protein
YP_002274673.1	TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: gdi:GDI2039 putative 2'-5' RNA ligase
YP_002274674.1	TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: gdi:GDI2040 alcohol dehydrogenase [acceptor] precursor
YP_002274675.1	PFAM: cytochrome c class I; KEGG: gdi:GDI2041 putative alcohol dehydrogenase cytochrome c subunit precursor
YP_002274676.1	PFAM: Silent information regulator protein Sir2; KEGG: gdi:GDI2042 putative NAD-dependent deacetylase
YP_002274677.1	KEGG: gdi:GDI2043 hypothetical protein
YP_002274678.1	PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: gdi:GDI2044 putative multiple antibiotic resistance protein MarC
YP_002274679.1	KEGG: gdi:GDI2045 hypothetical protein
YP_002274680.1	class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine
YP_002274681.1	SMART: helicase c2; KEGG: gdi:GDI2047 putative helicase
YP_002274682.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: gdi:GDI2048 putative cold-shock DNA-binding domain protein
YP_002274683.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
YP_002274684.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
YP_002274685.1	PFAM: Usg family protein; KEGG: gdi:GDI2052 putative Usg-like protein
YP_002274686.1	KEGG: gdi:GDI2053 hypothetical protein
YP_002274687.1	PFAM: dienelactone hydrolase; KEGG: gdi:GDI2054 dienelactone hydrolase
YP_002274688.1	Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate
YP_002274689.1	PFAM: cytochrome c1; KEGG: gdi:GDI2056 putative cytochrome c
YP_002274690.1	PFAM: Cytochrome b/b6 domain; KEGG: gdi:GDI2057 putative cytochrome b
YP_002274691.1	catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis
YP_002274692.1	KEGG: gdi:GDI2059 hypothetical protein
YP_002274693.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI2060 putative iron ABC transporter ATP-binding protein
YP_002274694.1	PFAM: transport system permease protein; KEGG: gdi:GDI2061 putative vitamin B12 import system permease protein BtuC
YP_002274695.1	PFAM: periplasmic binding protein; KEGG: gdi:GDI2062 periplasmic binding protein
YP_002274696.1	PFAM: Smr protein/MutS2; KEGG: gdi:GDI2063 putative small MutS related protein
YP_002274697.1	PFAM: Di-haem cytochrome c peroxidase; KEGG: gdi:GDI2064 putative cytochrome c551 peroxidase precursor
YP_002274698.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: gdi:GDI2065 putative modification methylase MjaV
YP_002274699.1	PFAM: MltA domain protein; 3D domain protein; KEGG: gdi:GDI2066 putative membrane-bound lytic murein transglycosylase A precursor
YP_002274700.1	PFAM: import inner membrane translocase subunit Tim44; KEGG: gdi:GDI2067 putative transporter protein
YP_002274701.1	molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA
YP_002274702.1	PFAM: Uroporphyrinogen III synthase HEM4; KEGG: gdi:GDI2069 putative uroporphyrinogen III synthase
YP_002274703.1	KEGG: gdi:GDI2070 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase
YP_002274704.1	KEGG: gdi:GDI2071 putative O-sialoglycoprotein endopeptidase; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease
YP_002274705.1	PFAM: protein of unknown function DUF519; KEGG: gdi:GDI2072 hypothetical protein
YP_002274706.1	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate
YP_002274707.1	KEGG: gdi:GDI2074 hypothetical protein
YP_002274708.1	PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: gdi:GDI2075 putative inner membrane transport protein
YP_002274709.1	PFAM: glutathione peroxidase; KEGG: gdi:GDI2077 putative glutathione peroxidase
YP_002274710.1	TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: gdi:GDI2078 putative virulence factor MviN
YP_002274711.1	This protein performs the mismatch recognition step during the DNA repair process
YP_002274712.1	catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein
YP_002274713.1	KEGG: gdi:GDI2081 hypothetical protein
YP_002274714.1	KEGG: gdi:GDI2082 hypothetical protein
YP_002274715.1	KEGG: gdi:GDI2083 hypothetical protein
YP_002274716.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gdi:GDI2084 hypothetical protein
YP_002274717.1	PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: gdi:GDI2085 thermostable carboxypeptidase 1
YP_002274718.1	KEGG: gdi:GDI2086 hypothetical protein
YP_002274719.1	KEGG: gdi:GDI2087 hypothetical protein
YP_002274720.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_002274721.1	PFAM: peptidase M16 domain protein; KEGG: gdi:GDI2089 peptidase, family M16
YP_002274722.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: gdi:GDI2090 peptidase U62, modulator of DNA gyrase
YP_002274723.1	PFAM: import inner membrane translocase subunit Tim44; KEGG: gdi:GDI2091 hypothetical protein
YP_002274724.1	KEGG: gdi:GDI2093 putative transposase
YP_002274725.1	KEGG: gdi:GDI2094 hypothetical protein
YP_002274726.1	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: gdi:GDI2704 putative transposase
YP_002274727.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI2705 putative integrase
YP_002274728.1	KEGG: gdi:GDI2098 putative invasion associated locus B (IalB) protein
YP_002274729.1	KEGG: gdi:GDI2099 hypothetical protein
YP_002274730.1	converts protoheme IX and farnesyl diphosphate to heme O
YP_002274731.1	PFAM: cytochrome c oxidase subunit I; KEGG: gdi:GDI2101 putative cytochrome c oxidase subunit 1
YP_002274732.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: gdi:GDI2102 putative phosphatidylethanolamine N-methyltransferase
YP_002274733.1	catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione
YP_002274734.1	TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: gdi:GDI2104 putative transcription elongation factor GreB
YP_002274735.1	PFAM: Aldose 1-epimerase; KEGG: gdi:GDI2105 putative aldose 1-epimerase (mutarotase)
YP_002274736.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_002274737.1	PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: gdi:GDI2107 putative exodeoxyribonuclease
YP_002274738.1	KEGG: gdi:GDI2108 hypothetical protein
YP_002274739.1	PFAM: ABC-1 domain protein; KEGG: gdi:GDI2109 putative ubiquinone biosynthesis protein UbiB
YP_002274740.1	TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: gdi:GDI2110 group B oligopeptidase PepB
YP_002274741.1	PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: gdi:GDI2111 putative glutamate synthase [NADPH] large chain precursor
YP_002274742.1	function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain
YP_002274743.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: gdi:GDI2113 putative NAD-dependent epimerase/dehydratase
YP_002274744.1	PFAM: 3'-5' exonuclease; KEGG: gdi:GDI2114 putative ribonuclease D
YP_002274745.1	KEGG: gdi:GDI2115 putative arabinose 5-phosphate isomerase; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS)
YP_002274746.1	PFAM: protein of unknown function DUF1239; KEGG: gdi:GDI2116 hypothetical protein
YP_002274747.1	PFAM: OstA family protein; KEGG: gdi:GDI2117 organic solvent tolerance protein
YP_002274748.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI2118 putative ABC transporter ATP-binding protein in RpoN region
YP_002274749.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen
YP_002274750.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: gdi:GDI2120 sigma(54) modulation protein
YP_002274751.1	KEGG: gdi:GDI2121 hypothetical protein
YP_002274752.1	PFAM: heat shock protein Hsp20; KEGG: gdi:GDI2122 putative small heat shock protein IbpA
YP_002274753.1	TIGRFAM: CRISPR-associated protein, Csn1 family; KEGG: gdi:GDI2123 hypothetical protein
YP_002274754.1	KEGG: gdi:GDI3803 putative transposase
YP_002274755.1	TIGRFAM: CRISPR-associated protein Cas1; KEGG: gdi:GDI2124 hypothetical protein
YP_002274756.1	TIGRFAM: CRISPR-associated protein Cas2; KEGG: gdi:GDI2125 hypothetical protein
YP_002274757.1	KEGG: gdi:GDI2127 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase
YP_002274758.1	TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: gdi:GDI2128 methionyl-tRNA formyltransferase
YP_002274759.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
YP_002274760.1	KEGG: gdi:GDI2130 hypothetical protein
YP_002274761.1	dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.
YP_002274762.1	catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway
YP_002274763.1	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate
YP_002274764.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_002274765.1	PFAM: 60 kDa inner membrane insertion protein; KEGG: gdi:GDI2135 putative inner membrane protein OxaA
YP_002274766.1	PFAM: protein of unknown function DUF37; KEGG: pap:PSPA7_3242 hypothetical protein
YP_002274767.1	TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: gdi:GDI2137 ribonuclease P protein component
YP_002274768.1	in Escherichia coli transcription of this gene is enhanced by polyamines
YP_002274769.1	KEGG: gdi:GDI2138 hypothetical protein
YP_002274770.1	KEGG: gdi:GDI2139 putative lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_002274771.1	PFAM: protein of unknown function DUF1009; KEGG: gdi:GDI2140 hypothetical protein
YP_002274772.1	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis
YP_002274773.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
YP_002274774.1	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis
YP_002274775.1	PFAM: outer membrane chaperone Skp (OmpH); KEGG: gdi:GDI2144 outer membrane protein
YP_002274776.1	TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: gdi:GDI2145 outer membrane protein assembly factor YaeT precursor
YP_002274777.1	KEGG: gdi:GDI2146 putative metalloprotease MmpA; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein
YP_002274778.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
YP_002274779.1	PFAM: phosphatidate cytidylyltransferase; KEGG: gdi:GDI2148 putative phosphatidate cytidylyltransferase
YP_002274780.1	KEGG: gdi:GDI2149 putative undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase
YP_002274781.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
YP_002274782.1	Catalyzes the phosphorylation of UMP to UDP
YP_002274783.1	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome
YP_002274784.1	PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: gdi:GDI2153 putative ribonuclease III
YP_002274785.1	KEGG: gdi:GDI2154 putative signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein
YP_002274786.1	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids
YP_002274787.1	KEGG: gdi:GDI2156 putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region
YP_002274788.1	Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
YP_002274789.1	TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: gdi:GDI2158 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YP_002274790.1	PFAM: protein of unknown function DUF88; KEGG: gdi:GDI2159 hypothetical protein
YP_002274791.1	PFAM: Uracil-DNA glycosylase superfamily; KEGG: gdi:GDI2160 putative uracil DNA glycosylase
YP_002274792.1	malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate
YP_002274793.1	PFAM: phosphate acetyl/butaryl transferase; KEGG: gdi:GDI2163 putative phosphate acetyltransferase
YP_002274794.1	PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: gdi:GDI2164 hypothetical protein
YP_002274795.1	in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ
YP_002274796.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: gdi:GDI2166 6-phosphogluconate dehydrogenase, NAD-binding
YP_002274797.1	KEGG: gdi:GDI2167 hypothetical protein
YP_002274798.1	PFAM: manganese and iron superoxide dismutase; KEGG: gdi:GDI2168 superoxide dismutase
YP_002274799.1	KEGG: gdi:GDI2169 putative galactose-proton symporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1
YP_002274800.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI2170 putative oxidoreductase
YP_002274801.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: gdi:GDI2171 putative galactonate dehydratase
YP_002274802.1	PFAM: KDPG and KHG aldolase; KEGG: gdi:GDI2172 hypothetical protein
YP_002274803.1	PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: gdi:GDI2173 putative 2-dehydro-3-deoxygalactonokinase
YP_002274804.1	PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: gdi:GDI2174 putative transcriptional regulator
YP_002274805.1	TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: gdi:GDI2175 hypothetical protein
YP_002274806.1	PFAM: protein of unknown function DUF815; KEGG: gdi:GDI2176 hypothetical protein
YP_002274807.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: gdi:GDI2177 vanillate O-demethylase oxygenase subunit
YP_002274808.1	TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; GCN5-related N-acetyltransferase; KEGG: gdi:GDI2178 putative bifunctional acetyltransferase
YP_002274809.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: gdi:GDI2179 transcriptional regulator, IclR family/regucalcin
YP_002274810.1	PFAM: molybdopterin binding domain; KEGG: gdi:GDI2180 molybdopterin binding
YP_002274811.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein
YP_002274812.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: gdi:GDI2182 putative tyrosine recombinase XerD
YP_002274813.1	KEGG: gdi:GDI2183 hypothetical protein
YP_002274814.1	PFAM: shikimate kinase; 3-dehydroquinate synthase; KEGG: gdi:GDI2184 putative bifunctional protein: shikimate kinase and 3-dehydroquinate synthase
YP_002274815.1	PFAM: surface antigen msp4 family protein; OmpA/MotB domain protein; KEGG: gdi:GDI2185 outer membrane lipoprotein
YP_002274816.1	PFAM: GtrA family protein; KEGG: gbe:GbCGDNIH1_1448 hypothetical protein
YP_002274817.1	PFAM: TENA/THI-4 domain protein; KEGG: gdi:GDI2186 thiaminase-2 protein
YP_002274818.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_002274819.1	PFAM: carbonic anhydrase; KEGG: gdi:GDI2188 carbonic anhydrase 1
YP_002274820.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: gdi:GDI2189 putative endonuclease/exonuclease/phosphatase family
YP_002274821.1	PFAM: aldo/keto reductase; KEGG: gdi:GDI2190 oxidoreductase protein
YP_002274822.1	PFAM: NUDIX hydrolase; KEGG: gdi:GDI2191 NUDIX hydrolase
YP_002274823.1	KEGG: gdi:GDI2192 hypothetical protein
YP_002274824.1	PFAM: Cupin domain protein; KEGG: gdi:GDI2193 hypothetical protein
YP_002274825.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: gdi:GDI2194 putative NADP oxidoreductase, coenzyme F420-dependent
YP_002274826.1	KEGG: gdi:GDI2195 hypothetical protein
YP_002274827.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_002274828.1	TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: gdi:GDI2197 putative peptide chain release factor 3
YP_002274829.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: gdi:GDI2198 putative multidrug resistance protein NorM (multidrug-efflux transporter)
YP_002274830.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
YP_002274831.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: gdi:GDI2199 putative cysteinyl-tRNA synthetase
YP_002274832.1	TIGRFAM: CRISPR-associated protein Cas2; KEGG: gdi:GDI2203 hypothetical protein
YP_002274833.1	TIGRFAM: CRISPR-associated protein Cas1; KEGG: gdi:GDI2204 hypothetical protein
YP_002274834.1	TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR-associated protein CT1974; KEGG: gdi:GDI2205 hypothetical protein
YP_002274835.1	TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: gdi:GDI2206 hypothetical protein
YP_002274836.1	TIGRFAM: CRISPR-associated protein, Cse4 family; PFAM: CRISPR-associated protein CT1975; KEGG: gdi:GDI2207 hypothetical protein
YP_002274837.1	TIGRFAM: CRISPR-associated protein, Cse2 family; PFAM: CRISPR-associated protein Cse2; KEGG: gdi:GDI2208 hypothetical protein
YP_002274838.1	TIGRFAM: CRISPR-associated protein, Cse1 family; PFAM: CRISPR-associated protein Cse1; KEGG: gdi:GDI2209 hypothetical protein
YP_002274839.1	KEGG: gdi:GDI2210 putative helicase protein; TIGRFAM: CRISPR-associated helicase Cas3; PFAM: helicase domain protein; SMART: DEAD-like helicases
YP_002274840.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_002274841.1	KEGG: gdi:GDI2212 hypothetical protein
YP_002274842.1	KEGG: gdi:GDI2213 hypothetical protein
YP_002274843.1	KEGG: gdi:GDI2214 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase, phenylalanine repressible); TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II
YP_002274844.1	KEGG: gdi:GDI2215 hypothetical protein
YP_002274845.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: gdi:GDI2216 glutathione reductase
YP_002274846.1	PFAM: Oxidoreductase FAD-binding domain protein; KEGG: gdi:GDI2217 ferredoxin--NADP reductase
YP_002274847.1	PFAM: helicase domain protein; KEGG: gdi:GDI2218 ATP-dependent RNA helicase
YP_002274848.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_002274849.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: gdi:GDI2220 putative sec-independent protein translocase protein TatC
YP_002274850.1	TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: gdi:GDI2221 putative sec-independent protein translocase protein TatB
YP_002274851.1	TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: gdi:GDI2222 putative segregation and condensation protein B
YP_002274852.1	PFAM: chromosome segregation and condensation protein ScpA; KEGG: gdi:GDI2223 putative segregation and condensation protein A
YP_002274853.1	PFAM: Sporulation domain protein; KEGG: gdi:GDI2224 putative sporulation protein
YP_002274854.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
YP_002274855.1	KEGG: gdi:GDI2226 deoxyguanosinetriphosphate triphosphohydrolase-like protein; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_002274856.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: gdi:GDI2227 putative iron-sulfur assembly protein
YP_002274857.1	TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: gdi:GDI2228 putative exodeoxyribonuclease III
YP_002274858.1	KEGG: gdi:GDI2229 hypothetical protein
YP_002274859.1	PFAM: amino acid permease-associated region; KEGG: gdi:GDI2230 GabA permease
YP_002274860.1	PFAM: Domain of unknown function DUF1849; KEGG: gdi:GDI2231 hypothetical protein
YP_002274861.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
YP_002274862.1	isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway
YP_002274863.1	molecular chaperone
YP_002274864.1	PFAM: NUDIX hydrolase; KEGG: gdi:GDI2235 putative MutT-like protein
YP_002274865.1	PFAM: protein of unknown function DUF985; KEGG: gdi:GDI2236 hypothetical protein
YP_002274866.1	KEGG: gdi:GDI2237 hypothetical protein
YP_002274867.1	PFAM: Xanthine/uracil/vitamin C permease; KEGG: gdi:GDI2238 putative permease protein
YP_002274868.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: gdi:GDI2239 putative signalling protein, GGDEF family
YP_002274869.1	PFAM: CBS domain containing protein; peptidase M50; KEGG: gdi:GDI2240 putative peptidase protein
YP_002274870.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI2241 putative transcriptional regulator, LysR family
YP_002274871.1	KEGG: gdi:GDI2242 hypothetical protein
YP_002274873.1	KEGG: gdi:GDI2243 hypothetical protein
YP_002274874.1	PFAM: MobA/MobL protein; KEGG: gdi:GDI2244 putative mobilization protein A
YP_002274875.1	KEGG: gdi:GDI2245 putative mobilization protein C
YP_002274876.1	KEGG: gdi:GDI2246 hypothetical protein
YP_002274877.1	PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: gdi:GDI2247 putative resolvase
YP_002274878.1	KEGG: gdi:GDI2722 putative transposase
YP_002274879.1	PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: gdi:GDI2248 putative transcriptional regulator
YP_002274880.1	KEGG: gdi:GDI2249 hypothetical protein
YP_002274881.1	KEGG: gdi:GDI2250 hypothetical protein
YP_002274882.1	PFAM: integrase family protein; KEGG: gdi:GDI2251 putative phage integrase
YP_002274883.1	KEGG: gdi:GDI2252 hypothetical protein
YP_002274884.1	KEGG: gdi:GDI2253 putative ribosomal large subunit pseudouridine synthase D; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase
YP_002274885.1	binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters
YP_002274886.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
YP_002274887.1	PFAM: tRNA synthetase class II (G H P and S); KEGG: gdi:GDI2256 putative histidyl-tRNA synthetase
YP_002274888.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate
YP_002274889.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis
YP_002274890.1	TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: gdi:GDI2259 putative protein MazG
YP_002274891.1	PFAM: inositol monophosphatase; KEGG: gdi:GDI2260 putative inositol-1-monophosphatase
YP_002274892.1	TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: gdi:GDI2261 GTP-binding protein HflX
YP_002274893.1	TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: gdi:GDI2262 putative protein NrfA (Nif-regulating factor)
YP_002274894.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: gdi:GDI2263 nitrogen assimilation regulatory protein NtrX
YP_002274895.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: gdi:GDI2264 putative histidine kinase, nitrogen regulation protein NtrY
YP_002274896.1	KEGG: gdi:GDI2265 putative nitrogen assimilation regulatory protein; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_002274897.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: gdi:GDI2266 putative histidine kinase, nitrogen regulation protein NtrB
YP_002274898.1	TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: gdi:GDI2267 tRNA-dihydrouridine synthase
YP_002274899.1	TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MECDP-synthase; KEGG: gdi:GDI2269 IspD/IspF bifunctional enzyme
YP_002274900.1	KEGG: gdi:GDI2271 hypothetical protein
YP_002274901.1	PFAM: ATP12 ATPase; KEGG: gdi:GDI2272 putative ATP12 chaperone protein
YP_002274902.1	PFAM: AsmA family protein; KEGG: gdi:GDI2273 hypothetical protein
YP_002274903.1	KEGG: gdi:GDI2274 putative ribosomal large subunit pseudouridine synthase A; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase
YP_002274904.1	KEGG: gdi:GDI2275 putative signalling protein, GGDEF family; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_002274905.1	PFAM: transposase IS4 family protein; KEGG: swi:Swit_4905 transposase, IS4 family
YP_002274907.1	PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: gdi:GDI2278 ATPase, AAA family protein
YP_002274908.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI2279 putative short-chain dehydrogenase
YP_002274909.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gdi:GDI2280 putative glutathione reductase
YP_002274910.1	PFAM: Glutathione S-transferase domain; KEGG: gdi:GDI2281 glutathione S-transferase
YP_002274911.1	blocks the formation of polar Z-ring septums
YP_002274912.1	TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: gdi:GDI2284 septum site-determining protein MinD
YP_002274913.1	works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell
YP_002274914.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: gdi:GDI2286 putative transcriptional regulator, GntR family
YP_002274915.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI2287 putative ABC transporter, ATP-binding protein
YP_002274916.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI2289 glycosyl transferase, group 1
YP_002274917.1	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling
YP_002274918.1	PFAM: glycosyl transferase family 2; KEGG: gdi:GDI2292 putative glycosyl transferase
YP_002274919.1	KEGG: gdi:GDI2293 hypothetical protein
YP_002274920.1	catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis
YP_002274921.1	KEGG: gdi:GDI2295 hypothetical protein
YP_002274922.1	KEGG: gdi:GDI2296 protein RecA (recombinase A); TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase
YP_002274923.1	PFAM: gamma-glutamyltranspeptidase; KEGG: gdi:GDI2297 gamma-glutamyltranspeptidase precursor
YP_002274924.1	PFAM: DSBA oxidoreductase; KEGG: gdi:GDI2298 putative oxidoreductase
YP_002274925.1	catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine
YP_002274926.1	KEGG: gox:GOX0509 hypothetical protein
YP_002274927.1	PFAM: Transketolase domain protein; Transketolase central region; KEGG: gdi:GDI2301 putative transketolase
YP_002274928.1	KEGG: gdi:GDI2302 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_002274929.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
YP_002274930.1	KEGG: gdi:GDI2304 cell division protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_002274931.1	KEGG: gdi:GDI2305 hypothetical protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB
YP_002274932.1	PFAM: diaminopimelate epimerase; KEGG: gdi:GDI2306 putative diaminopimelate epimerase
YP_002274933.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gdi:GDI2307 putative lactoylglutathione lyase
YP_002274934.1	PFAM: Methyltransferase type 11; KEGG: gdi:GDI2308 putative methyltransferase protein
YP_002274935.1	KEGG: gdi:GDI2309 hypothetical protein
YP_002274936.1	KEGG: gdi:GDI2310 hypothetical protein
YP_002274937.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI2311 putative ABC-type Fe3+ transport system ATP-binding component
YP_002274938.1	PFAM: transport system permease protein; KEGG: gdi:GDI2312 putative ABC-type Fe3+ transport system permease component
YP_002274939.1	PFAM: periplasmic binding protein; KEGG: gdi:GDI2313 putative ABC-type Fe3+ transport system periplasmic component
YP_002274940.1	KEGG: gdi:GDI2314 hypothetical protein
YP_002274941.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
YP_002274942.1	TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: gdi:GDI2316 glycine cleavage system H protein
YP_002274943.1	TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: gdi:GDI2317 glycine cleavage system aminomethyltransferase T
YP_002274944.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: gdi:GDI2318 putative antibiotic biosynthesis monooxygenase
YP_002274945.1	catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine
YP_002274946.1	TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related; KEGG: gdi:GDI2320 putative S-adenosylmethionine decarboxylase proenzyme
YP_002274947.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
YP_002274948.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: gdi:GDI2322 single-stranded DNA-binding protein
YP_002274949.1	negatively supercoils closed circular double-stranded DNA
YP_002274950.1	KEGG: gdi:GDI2324 putative phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase
YP_002274951.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: gdi:GDI2325 putative peptidyl-prolyl cis-trans isomerase B
YP_002274952.1	PFAM: integrase family protein; KEGG: mex:Mext_0175 integrase family protein
YP_002274953.1	KEGG: lpl:lp_2473 prophage Lp3 protein 8, helicase
YP_002274955.1	KEGG: cja:CJA_0810 hypothetical protein
YP_002274956.1	KEGG: ade:Adeh_3279 hypothetical protein
YP_002274958.1	KEGG: atc:AGR_L_3548 hypothetical protein
YP_002274964.1	TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: det:DET1087 portal protein, HK97 family, putative
YP_002274965.1	KEGG: gdi:GDI3569 hypothetical protein
YP_002274966.1	KEGG: cel:H43E16.1 H43E16.1
YP_002274967.1	KEGG: gox:GOX2347 bacteriophage tail sheath protein
YP_002274969.1	KEGG: bph:Bphy_1875 putative membrane protein, phage K related
YP_002274970.1	KEGG: rsp:RSP_1645 putative phage-related protein
YP_002274971.1	PFAM: Terminase; KEGG: par:Psyc_0464 probable phage terminase, large subunit
YP_002274972.1	PFAM: Baseplate J family protein; KEGG: bph:Bphy_1870 baseplate J family protein
YP_002274973.1	PFAM: peptidase U35 phage prohead HK97; KEGG: eba:ebA5486 conserved hypothetical protein, putative major phage head protein/prohead proteinase
YP_002274974.1	KEGG: stm:STM1028 lysozyme
YP_002274975.1	KEGG: bxe:Bxe_A3050 putative bacteriophage tail protein GpP,Mu-like
YP_002274976.1	KEGG: rbo:A1I_04370 hypothetical protein
YP_002274977.1	TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: maq:Maqu_2671 protein of unknown function DUF891
YP_002274980.1	PFAM: transglutaminase domain protein; KEGG: gdi:GDI2327 hypothetical protein
YP_002274981.1	KEGG: gdi:GDI2328 hypothetical protein
YP_002274982.1	KEGG: gdi:GDI2329 hypothetical protein
YP_002274983.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_002274984.1	KEGG: gdi:GDI2332 glycyl-tRNA synthetase beta chain (glycine--tRNA LigAs beta chain) (GlyRS); TIGRFAM: glycyl-tRNA synthetase, beta subunit
YP_002274985.1	KEGG: dra:DR_1989 hypothetical protein
YP_002274986.1	TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: gdi:GDI2333 putative rod shape-determining protein MerD
YP_002274987.1	KEGG: gdi:GDI2334 putative cell elongation specific D,D-transpeptidase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain
YP_002274988.1	KEGG: gdi:GDI2335 hypothetical protein
YP_002274989.1	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall
YP_002274990.1	functions in MreBCD complex in some organisms
YP_002274991.1	KEGG: gdi:GDI2338 hypothetical protein
YP_002274992.1	KEGG: acr:Acry_0749 hypothetical protein
YP_002274993.1	catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis
YP_002274994.1	PFAM: Chloramphenicol phosphotransferase family protein; KEGG: gdi:GDI2340 putative chloramphenicol 3-O phosphotransferase
YP_002274995.1	PFAM: cell wall hydrolase/autolysin; KEGG: gdi:GDI2341 putative N-acetylmuramoyl-L-alanine amidase AmiA precursor
YP_002274996.1	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: gdi:GDI2343 putative ribonuclease E
YP_002274997.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gdi:GDI2344 putative chemoreceptor McpA (methyl-accepting chemotaxis protein)
YP_002274998.1	KEGG: gdi:GDI2345 hypothetical protein
YP_002274999.1	KEGG: gdi:GDI2346 hypothetical protein
YP_002275000.1	PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gdi:GDI2347 putative pyridine nucleotide-disulphide oxidoreductase
YP_002275001.1	PFAM: amidohydrolase; KEGG: gdi:GDI2348 putative amidohydrolase
YP_002275002.1	KEGG: gdi:GDI2349 putative serine acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein
YP_002275003.1	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: gdi:GDI2350 2-octaprenyl-6-methoxyphenol hydroxylase
YP_002275004.1	PFAM: nitrogen regulatory protein P-II; KEGG: gdi:GDI2351 putative nitrogen regulatory protein
YP_002275005.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: gdi:GDI2352 putative ammonia channel precursor (ammonia transporter)
YP_002275006.1	KEGG: gdi:GDI2353 hypothetical protein
YP_002275007.1	KEGG: gdi:GDI2354 hypothetical protein
YP_002275008.1	KEGG: gdi:GDI2355 putative proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold
YP_002275009.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs
YP_002275010.1	binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity
YP_002275011.1	PFAM: Catalase domain protein; KEGG: gdi:GDI2359 catalase HPII
YP_002275012.1	PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gdi:GDI2360 putative oxidoreductases
YP_002275013.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: gdi:GDI2361 zinc transporter ZitB
YP_002275014.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: gdi:GDI2362 putative cation-efflux pump FieF
YP_002275015.1	PFAM: Chloride channel core; KEGG: gdi:GDI2363 putative H(+))/Cl(-) exchange transporter ClcA
YP_002275016.1	PFAM: cytochrome P450; KEGG: gdi:GDI2364 putative cytochrome P450
YP_002275017.1	SMART: WD-40 repeat protein; KEGG: gdi:GDI2365 hypothetical protein
YP_002275018.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: gdi:GDI2366 cobalamin synthesis protein
YP_002275019.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI2367 putative glycosyl transferase, group 1
YP_002275020.1	PFAM: Glutathione S-transferase domain; KEGG: gdi:GDI2368 glutathione S-transferase
YP_002275021.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_002275022.1	PFAM: ferredoxin; KEGG: gdi:GDI2370 putative 2Fe-2S ferredoxin
YP_002275023.1	PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gdi:GDI2371 putative cysteine desulfurase
YP_002275024.1	PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gdi:GDI2372 putative cysteine desulfurase
YP_002275025.1	KEGG: gdi:GDI2374 hypothetical protein
YP_002275026.1	KEGG: gdi:GDI2375 putative tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib
YP_002275027.1	KEGG: gdi:GDI2376 hypothetical protein
YP_002275028.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: gdi:GDI2377 putative ubiquinol-cytochrome c reductase
YP_002275029.1	PFAM: peptidase M29 aminopeptidase II; KEGG: gdi:GDI2378 aminopeptidase
YP_002275030.1	KEGG: gdi:GDI2379 hypothetical protein
YP_002275031.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI2380 putative capsular polysaccharide biosynthesis glycosyl transferase cap
YP_002275032.1	PFAM: Heparinase II/III family protein; KEGG: gdi:GDI2381 putative heparinase II/III-like
YP_002275033.1	PFAM: ribulose-phosphate 3-epimerase; KEGG: gdi:GDI2382 ribulose-phosphate 3-epimerase
YP_002275034.1	PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; methyltransferase small; KEGG: gdi:GDI2383 putative ribosomal RNA small subunit methyltransferase B
YP_002275035.1	PFAM: alanine racemase domain protein; KEGG: gdi:GDI2384 putative alanine racemase
YP_002275036.1	PFAM: K potassium transporter; KEGG: gdi:GDI2385 potassium transport system protein
YP_002275037.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_002275038.1	PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: gdi:GDI2387 putative pyrimidine-specific ribonucleoside hydrolase
YP_002275039.1	PFAM: conserved hypothetical protein; KEGG: gdi:GDI2388 hypothetical protein
YP_002275040.1	PFAM: Sporulation domain protein; Lytic transglycosylase catalytic; KEGG: gdi:GDI2389 putative lytic transglycosylase
YP_002275041.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: gdi:GDI2390 putative periplasmic beta-glucosidase precursor
YP_002275042.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI2391 putative major facilitator transporter protein
YP_002275043.1	KEGG: gdi:GDI2392 hypothetical protein
YP_002275044.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
YP_002275045.1	KEGG: gdi:GDI2394 hypothetical protein
YP_002275046.1	required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA
YP_002275047.1	PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: gdi:GDI2396 putative fatty acid synthase
YP_002275048.1	PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: gdi:GDI2397 putative 2-amino-3-ketobutyrate coenzyme A ligase
YP_002275049.1	PFAM: Capsule polysaccharide biosynthesis protein; KEGG: gdi:GDI2398 putative capsule polysaccharide export protein KpsS
YP_002275050.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI2399 putative glycosyl transferase, group 1
YP_002275051.1	PFAM: Capsule polysaccharide biosynthesis protein; KEGG: gdi:GDI2400 putative capsule polysaccharide export protein KpsC
YP_002275052.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI2401 putative glycosyl transferase, group 1
YP_002275053.1	PFAM: sulfatase; KEGG: gdi:GDI2402 putative capsular polysaccharide biosynthesis protein
YP_002275054.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: gdi:GDI0834 UDP-glucose 4-epimerase
YP_002275055.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI3144 putative transposase
YP_002275056.1	PFAM: transposase IS3/IS911 family protein; KEGG: gdi:GDI2859 putative transposase
YP_002275057.1	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: gdi:GDI2704 putative transposase
YP_002275058.1	KEGG: gdi:GDI3803 putative transposase
YP_002275059.1	KEGG: tpd:Teth39_0264 dextranase
YP_002275061.1	PFAM: transposase IS4 family protein; KEGG: nha:Nham_2748 transposase, IS4
YP_002275062.1	KEGG: swi:Swit_5112 transposase, mutator type
YP_002275063.1	KEGG: syw:SYNW0988 hypothetical protein
YP_002275064.1	KEGG: syw:SYNW0988 hypothetical protein
YP_002275065.1	PFAM: transposase IS3/IS911 family protein; KEGG: gdi:GDI2839 putative transposase
YP_002275066.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI2409 capsule polysaccharide export ATP-binding protein CtrD
YP_002275067.1	PFAM: ABC-2 type transporter; KEGG: gdi:GDI2410 putative capsule polysaccharide export inner-membrane protein CtrC
YP_002275068.1	KEGG: gdi:GDI2411 putative capsule polysaccharide export inner-membrane protein CtrB
YP_002275069.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI2412 putative glycosyl transferase, group 1
YP_002275070.1	PFAM: polysaccharide export protein; KEGG: gdi:GDI2413 putative polysaccharide export protein
YP_002275071.1	PFAM: Ion transport 2 domain protein ; K channel inward rectifier conserved region 2 domain protein; KEGG: gdi:GDI2414 putative inward rectifier potassium channel
YP_002275072.1	KEGG: gdi:GDI2415 hypothetical protein
YP_002275073.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gdi:GDI2416 putative glyoxylase I family protein
YP_002275074.1	PFAM: protein of unknown function DUF1330; KEGG: gdi:GDI2417 hypothetical protein
YP_002275075.1	KEGG: gdi:GDI2418 hypothetical protein
YP_002275076.1	PFAM: CHAD domain containing protein; KEGG: gdi:GDI2419 putative adenylate cyclase
YP_002275077.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: gdi:GDI2420 putative transcriptional regulator, AsnC family
YP_002275078.1	KEGG: gdi:GDI2421 putative alanine racemase, catabolic; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein
YP_002275079.1	PFAM: FAD dependent oxidoreductase; KEGG: gdi:GDI2422 putative D-amino acid dehydrogenase small subunit
YP_002275080.1	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: gdi:GDI2704 putative transposase
YP_002275081.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI2705 putative integrase
YP_002275082.1	KEGG: gdi:GDI2427 hypothetical protein
YP_002275083.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gdi:GDI2428 putative low specificity L-threonine aldolase
YP_002275084.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: gdi:GDI2429 lysine exporter protein
YP_002275085.1	TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: gdi:GDI2430 putative phenazine-like biosynthesis protein
YP_002275086.1	KEGG: gdi:GDI1869 hypothetical protein
YP_002275087.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: gdi:GDI2432 putative transcriptional regulator, GntR family
YP_002275088.1	PFAM: protein of unknown function UPF0126; KEGG: gdi:GDI2433 putative inner membrane protein
YP_002275089.1	PFAM: low temperature requirement A; KEGG: gdi:GDI2434 putative low temperature requirement A protein (LtrA)
YP_002275090.1	PFAM: peptidase M61 domain protein; KEGG: gdi:GDI2435 putative glycyl aminopeptidase
YP_002275091.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI2437 secretion protein, HlyD-family
YP_002275092.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: gdi:GDI2438 putative cobalt-zinc-cadmium resistance protein
YP_002275093.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI2439 putative efflux pump outer membrane protein
YP_002275094.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI2440 putative ribose transport ATP-binding protein RbsA
YP_002275095.1	PFAM: inner-membrane translocator; KEGG: gdi:GDI2441 putative ribose transport system permease protein RbsC
YP_002275096.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: gdi:GDI2442 putative D-ribose-binding protein precursor
YP_002275097.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI2443 putative integrase
YP_002275098.1	KEGG: gdi:GDI2444 hypothetical protein
YP_002275099.1	PFAM: dienelactone hydrolase; KEGG: gdi:GDI2445 putative dienelactone hydrolases
YP_002275100.1	TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: gdi:GDI2446 putative acetyl-coenzyme A synthetase
YP_002275102.1	PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: gdi:GDI2447 putative transcriptional regulator
YP_002275103.1	TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: gdi:GDI2449 putative isocitrate lyase
YP_002275104.1	catalyzes the formation of malate from glyoxylate and acetyl-CoA
YP_002275105.1	PFAM: conserved hypothetical protein; KEGG: gdi:GDI2451 hypothetical protein
YP_002275106.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI2452 putative ferric cations import ATP-binding protein FbpC
YP_002275107.1	PFAM: Endoribonuclease L-PSP; KEGG: gdi:GDI2454 putative endoribonuclease protein
YP_002275108.1	PFAM: cytochrome c class I; KEGG: gdi:GDI2455 putative alcohol dehydrogenase cytochrome c subunit
YP_002275109.1	PFAM: amine oxidase; KEGG: gdi:GDI2456 putative L-amino-acid oxidase precursor
YP_002275110.1	PFAM: CBS domain containing protein; KEGG: gdi:GDI2458 putative cystathionine-beta-synthase
YP_002275111.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: gdi:GDI2459 putative NADH-quinone oxidoreductase chain N
YP_002275112.1	KEGG: gdi:GDI2460 putative NADH-quinone oxidoreductase chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_002275113.1	KEGG: gdi:GDI2461 putative NADH-quinone oxidoreductase chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I)
YP_002275114.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: gdi:GDI2462 putative NADH-quinone oxidoreductase chain K
YP_002275115.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: gdi:GDI2463 putative NADH-quinone oxidoreductase chain J
YP_002275116.1	TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gdi:GDI2464 putative NADH-quinone oxidoreductase subunit I
YP_002275117.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: gdi:GDI2465 putative NADH-quinone oxidoreductase subunit H
YP_002275118.1	TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: ferredoxin; molybdopterin oxidoreductase Fe4S4 region; KEGG: gdi:GDI2466 putative NADH-quinone oxidoreductase chain 3
YP_002275119.1	PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: gdi:GDI2467 putative NADH-quinone oxidoreductase chain F
YP_002275120.1	PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: gdi:GDI2468 putative NADH-quinone oxidoreductase chain E
YP_002275121.1	NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms
YP_002275122.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
YP_002275123.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: gdi:GDI2471 putative NADH-quinone oxidoreductase chain A
YP_002275124.1	TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: gdi:GDI2472 aminobenzoyl-glutamate utilization protein
YP_002275125.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI2473 alcohol dehydrogenase
YP_002275126.1	TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: gdi:GDI2474 transcriptional regulator, GntR family
YP_002275127.1	PFAM: phosphoesterase; KEGG: gdi:GDI2475 putative phospholipase C
YP_002275128.1	PFAM: Di-haem cytochrome c peroxidase; KEGG: gdi:GDI2476 putative cytochrome c peroxidase
YP_002275129.1	KEGG: gdi:GDI2477 putative non-hemolytic phospholipase C precursor; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756
YP_002275130.1	PFAM: Endoribonuclease L-PSP; KEGG: gdi:GDI2478 putative endoribonuclease L-PSP protein
YP_002275131.1	TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: gdi:GDI2479 branched-chain-amino-acid aminotransferase
YP_002275132.1	PFAM: Aldehyde Dehydrogenase; KEGG: gdi:GDI2480 succinate-semialdehyde dehydrogenase
YP_002275133.1	TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI2482 putative zinc-containing alcohol dehydrogenase superfamily
YP_002275134.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: gdi:GDI2483 putative 2 phosphatidic acid phosphatase (PAP2) protein
YP_002275135.1	KEGG: gdi:GDI2485 hypothetical protein
YP_002275136.1	PFAM: acyltransferase 3; KEGG: gdi:GDI2486 putative acyltransferase protein
YP_002275137.1	KEGG: gdi:GDI2487 hypothetical protein
YP_002275138.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI2489 putative glycosyl transferase, group 1
YP_002275139.1	PFAM: polysaccharide export protein; KEGG: gdi:GDI2490 putative exopolysaccharide production protein ExoF
YP_002275140.1	KEGG: gdi:GDI2491 hypothetical protein
YP_002275141.1	KEGG: gdi:GDI2492 putative exopolysaccharide production protein ExoY; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase
YP_002275142.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: gdi:GDI2493 putative succinoglycan biosynthesis transport protein
YP_002275143.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI2494 putative glycosyl transferase
YP_002275144.1	KEGG: gdi:GDI2495 hypothetical protein
YP_002275145.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI2496 putative glycosyl transferase
YP_002275146.1	PFAM: glycosyl transferase family 2; KEGG: gdi:GDI2497 putative glycosyl transferase
YP_002275147.1	PFAM: glycosyl transferase family 2; KEGG: gdi:GDI2498 hypothetical protein
YP_002275148.1	PFAM: polysaccharide biosynthesis protein; KEGG: gdi:GDI2499 putative O-antigen transporter
YP_002275149.1	SMART: transglutaminase domain protein; KEGG: gdi:GDI2500 hypothetical protein
YP_002275150.1	KEGG: gdi:GDI2501 hypothetical protein
YP_002275151.1	PFAM: glycosyl transferase family 2; KEGG: gdi:GDI2502 hypothetical protein
YP_002275152.1	KEGG: gdi:GDI2503 hypothetical protein
YP_002275153.1	PFAM: dehydrogenase E1 component; KEGG: gdi:GDI2504 putative 2-oxoglutarate dehydrogenase E1 component beta subunit
YP_002275154.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: gdi:GDI2505 putative 2-oxoglutarate dehydrogenase E1 component beta subunit
YP_002275155.1	PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: gdi:GDI2506 putative 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
YP_002275156.1	KEGG: gdi:GDI2507 hypothetical protein
YP_002275157.1	KEGG: gdi:GDI2508 hypothetical protein
YP_002275158.1	KEGG: gdi:GDI2510 hypothetical protein
YP_002275159.1	PFAM: small multidrug resistance protein; KEGG: gdi:GDI2511 putative small multidrug resistance protein
YP_002275160.1	KEGG: gdi:GDI2512 hypothetical protein
YP_002275161.1	KEGG: gdi:GDI2513 hypothetical protein
YP_002275162.1	PFAM: UbiA prenyltransferase; KEGG: gdi:GDI2514 putative UbiA prenyltransferase family protein
YP_002275163.1	PFAM: Na+/solute symporter; KEGG: gdi:GDI2515 putative sodium/substrate symport protein
YP_002275164.1	KEGG: gdi:GDI2516 hypothetical protein
YP_002275165.1	PFAM: NUDIX hydrolase; KEGG: gdi:GDI2517 nucleoside diphosphate hydrolase
YP_002275166.1	TIGRFAM: TonB family protein; KEGG: gdi:GDI2518 hypothetical protein
YP_002275167.1	KEGG: gdi:GDI2520 hypothetical protein
YP_002275168.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI2521 putative TonB-dependent receptor
YP_002275169.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: gdi:GDI2522 putative UDP-glucuronate 5'-epimerase (UDP-glucuronic aci epimerase)
YP_002275170.1	PFAM: amidinotransferase; KEGG: gdi:GDI2523 arginine deiminase
YP_002275171.1	KEGG: gdi:GDI2524 hypothetical protein
YP_002275172.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: gdi:GDI2525 putative proline/betaine transporter
YP_002275173.1	KEGG: gdi:GDI2526 adenine deaminase; TIGRFAM: adenine deaminase; PFAM: amidohydrolase
YP_002275174.1	PFAM: PepSY-associated TM helix domain protein; KEGG: gdi:GDI2527 hypothetical protein
YP_002275175.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI2528 putative major facilitator family transporter
YP_002275176.1	PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: gdi:GDI2529 putative transcriptional regulator, AraC family
YP_002275177.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI2530 putative NADP-dependent alcohol dehydrogenase C
YP_002275178.1	KEGG: gdi:GDI2531 hypothetical protein
YP_002275179.1	PFAM: inner-membrane translocator; KEGG: gdi:GDI2532 putative xylose transport system permease protein XylH
YP_002275180.1	with XylFH is part of the high affinity xylose ABC transporter
YP_002275181.1	KEGG: gdi:GDI2534 D-xylose-binding periplasmic protein precursor; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator
YP_002275182.1	PFAM: polysaccharide biosynthesis protein; KEGG: gdi:GDI2535 putative lipopolysaccharide biosynthesis protein
YP_002275183.1	PFAM: glycosyl transferase family 2; KEGG: gdi:GDI2536 putative glycosyl transferase
YP_002275184.1	PFAM: glycoside hydrolase family 5; KEGG: gdi:GDI2537 putative endoglucanase precursor
YP_002275185.1	KEGG: gdi:GDI2538 putative GumE protein
YP_002275186.1	PFAM: acyltransferase 3; KEGG: gdi:GDI2539 putative acyltransferase
YP_002275187.1	KEGG: gdi:GDI2542 GumK protein
YP_002275188.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI2543 putative colanic acid biosynthesis glycosyl transferase
YP_002275189.1	PFAM: glycosyl transferase family 2; KEGG: gdi:GDI2544 putative succinoglycan biosynthesis protein ExoO
YP_002275190.1	KEGG: gdi:GDI2545 putative UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase
YP_002275191.1	TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: gdi:GDI2547 putative polysaccharide biosynthesis glycosyltransferase
YP_002275192.1	TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: gdi:GDI2548 putative glycosyl transferase
YP_002275193.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: gdi:GDI2549 putative succinoglycan biosynthesis transport protein ExoP
YP_002275194.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI2550 putative glycosyl transferase protein
YP_002275195.1	KEGG: gdi:GDI2551 hypothetical protein
YP_002275196.1	PFAM: polysaccharide export protein; KEGG: gdi:GDI2552 putative exopolysaccharide production protein
YP_002275197.1	KEGG: gdi:GDI2553 hypothetical protein
YP_002275198.1	KEGG: gdi:GDI2554 hypothetical protein
YP_002275199.1	KEGG: gdi:GDI2555 hypothetical protein
YP_002275200.1	KEGG: gdi:GDI2557 hypothetical protein
YP_002275201.1	KEGG: gdi:GDI2560 hypothetical protein
YP_002275202.1	PFAM: LmbE family protein; KEGG: gdi:GDI2561 putative GPI biosynthesis protein
YP_002275203.1	KEGG: gdi:GDI2562 hypothetical protein
YP_002275204.1	PFAM: glycosyl transferase family 2; KEGG: gdi:GDI2564 putative glycosyl transferase protein
YP_002275205.1	PFAM: NodS family protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: gdi:GDI2565 putative methyltransferase
YP_002275206.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI2566 putative major facilitator superfamily (MFS) transporter
YP_002275207.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: gdi:GDI2567 putative signalling protein, GGDEF family
YP_002275208.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: gdi:GDI2568 putative signalling protein, GGDEF family
YP_002275209.1	KEGG: gdi:GDI2569 hypothetical protein
YP_002275210.1	PFAM: PRC-barrel domain protein; KEGG: gdi:GDI2570 PRC-barrel protein
YP_002275211.1	PFAM: amino acid permease-associated region; KEGG: gdi:GDI2571 putative amino acid permease
YP_002275212.1	catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine
YP_002275213.1	PFAM: O-methyltransferase family 2; regulatory protein ArsR; Methyltransferase type 11; Methyltransferase type 12; KEGG: gdi:GDI2574 putative methyltransferase protein
YP_002275214.1	KEGG: gdi:GDI2575 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase
YP_002275215.1	KEGG: gdi:GDI2576 hypothetical protein
YP_002275216.1	KEGG: gdi:GDI2577 hypothetical protein
YP_002275217.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: gdi:GDI2578 putative glucose-resistance amylase regulator
YP_002275218.1	KEGG: gdi:GDI2579 putative N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase
YP_002275219.1	PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: gdi:GDI2580 putative glutathione-regulated potassium-efflux system protein KefC (K(+)/H(+) antiporter)
YP_002275220.1	KEGG: gdi:GDI2581 hypothetical protein
YP_002275221.1	KEGG: gdi:GDI2582 hypothetical protein
YP_002275222.1	PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: gdi:GDI2583 putative peptidyl-dipeptidase dcp
YP_002275223.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI2584 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase
YP_002275224.1	PFAM: histone family protein DNA-binding protein; KEGG: gdi:GDI2588 putative DNA-binding protein HU-beta
YP_002275225.1	PFAM: GAF domain protein; KEGG: gdi:GDI2589 hypothetical protein
YP_002275226.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: gdi:GDI2590 putative signalling protein, GGDEF family
YP_002275227.1	PFAM: extracellular solute-binding protein family 1; KEGG: gdi:GDI2591 putative spermidine/putrescine-binding periplasmic protein precursor
YP_002275228.1	PFAM: cytochrome P450; KEGG: gdi:GDI2592 putative cytochrome P450
YP_002275229.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: gdi:GDI2593 putative antibiotic biosynthesis monooxygenase
YP_002275230.1	KEGG: gdi:GDI2594 hypothetical protein
YP_002275231.1	PFAM: cytochrome c oxidase subunit III; KEGG: gdi:GDI2595 putative cytochrome c oxidase subunit 3
YP_002275232.1	KEGG: gdi:GDI2596 putative cytochrome c oxidase subunit 1; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I
YP_002275233.1	TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; KEGG: gdi:GDI2597 putative cytochrome c oxidase subunit 2 precursor
YP_002275234.1	KEGG: gdi:GDI2614 hypothetical protein
YP_002275235.1	KEGG: gdi:GDI2615 hypothetical protein
YP_002275236.1	KEGG: gdi:GDI2616 hypothetical protein
YP_002275237.1	KEGG: gdi:GDI2617 hypothetical protein
YP_002275238.1	KEGG: gdi:GDI2618 hypothetical protein
YP_002275239.1	PFAM: Polysulphide reductase NrfD; KEGG: gdi:GDI2619 putative polysulphide reductase, NrfD
YP_002275240.1	KEGG: gdi:GDI2620 putative 4Fe-4S ferredoxin, iron-sulfur binding
YP_002275241.1	KEGG: gdi:GDI2621 putative chaperone protein HtpG
YP_002275242.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gdi:GDI2622 putative methyl-accepting chemotaxis protein
YP_002275243.1	TIGRFAM: acetoin reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI2623 acetoin(diacetyl) reductase
YP_002275244.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: gdi:GDI2624 putative transporter protein
YP_002275245.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI2625 glucose 1-dehydrogenase
YP_002275246.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: gdi:GDI2626 putative D-ribose-binding protein precursor
YP_002275247.1	PFAM: inner-membrane translocator; KEGG: gdi:GDI2627 putative ribose transport system permease protein RbsC
YP_002275248.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI2628 putative ribose transport ATP-binding protein RbsA
YP_002275249.1	KEGG: gdi:GDI2629 hypothetical protein
YP_002275250.1	PFAM: inner-membrane translocator; KEGG: gdi:GDI2631 putative ribose transport system permease protein RbsC
YP_002275251.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI2632 putative ABC transporter, ATP-binding protein
YP_002275252.1	TIGRFAM: FGGY-family pentulose kinase; PFAM: carbohydrate kinase FGGY; KEGG: gdi:GDI2633 ribulokinase
YP_002275253.1	PFAM: extracellular solute-binding protein family 1; KEGG: gdi:GDI2634 putative transporter protein
YP_002275254.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI2635 putative transporter protein
YP_002275255.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI2636 putative transporter protein
YP_002275256.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: gdi:GDI2637 sugar uptake ABC transporter ATP-binding protein
YP_002275257.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI2638 3-oxoacyl-[acyl-carrier-protein] reductase
YP_002275258.1	TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: gdi:GDI2639 putative xylulose kinase
YP_002275259.1	PFAM: Carbohydrate-selective porin OprB; KEGG: gdi:GDI2640 putative porin B precursor
YP_002275260.1	KEGG: gdi:GDI2641 ribose transport system permease protein RbsC
YP_002275261.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI2642 putative ribitol 2-dehydrogenase
YP_002275262.1	KEGG: gdi:GDI2643 putative nitrate transport protein NrtA
YP_002275263.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI2644 putative nitrate transport permease protein NrtB
YP_002275264.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI2645 putative nitrate transport ATP-binding protein NrtC
YP_002275265.1	KEGG: gdi:GDI2646 putative serine acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein
YP_002275266.1	TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: gdi:GDI2647 60 kDa chaperonin
YP_002275267.1	PFAM: chaperonin Cpn10; KEGG: gdi:GDI2648 10 kDa chaperonin (protein Cpn10)
YP_002275268.1	KEGG: gdi:GDI2649 hypothetical protein
YP_002275269.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: gdi:GDI2651 putative peroxiredoxin
YP_002275270.1	KEGG: gdi:GDI2652 putative peroxiredoxin
YP_002275271.1	PFAM: protein of unknown function DUF1234; KEGG: gdi:GDI2653 putative hydrolase
YP_002275272.1	PFAM: NLPA lipoprotein; KEGG: gdi:GDI2654 putative D-methionine-binding lipoprotein MetQ
YP_002275273.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI2655 putative D-methionine transport ATP-binding protein MetN
YP_002275274.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI2656 putative D-methionine transport system permease protein MetI
YP_002275275.1	catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose
YP_002275276.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: gdi:GDI2658 D-ribose-binding periplasmic protein precursor
YP_002275277.1	PFAM: inner-membrane translocator; KEGG: gdi:GDI2659 putative ribose transport system permease protein RbsC
YP_002275278.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI2660 putative ribose transport ATP-binding protein RbsA
YP_002275279.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: gdi:GDI2661 putative fructose repressor
YP_002275280.1	PFAM: amidohydrolase 2; KEGG: gdi:GDI2662 putative amidohydrolases
YP_002275281.1	PFAM: RbsD or FucU transport; KEGG: gdi:GDI2663 fucose operon FucU protein
YP_002275282.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI2664 putative short chain dehydrogenase
YP_002275283.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: gdi:GDI2665 putative mandelate racemase
YP_002275284.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: gdi:GDI2666 putative fumarylacetoacetate (FAA) hydrolase family
YP_002275285.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI2667 putative oxidoreductase
YP_002275286.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: gdi:GDI2668 putative transcriptional regulator, GntR family
YP_002275287.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: gdi:GDI2669 putative leucine-responsive regulatory protein
YP_002275288.1	TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase; KEGG: gdi:GDI2670 putative bifunctional protein PutA
YP_002275289.1	KEGG: bid:Bind_1489 hypothetical protein
YP_002275290.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI2671 putative transcriptional regulator, LysR family
YP_002275291.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: gdi:GDI2672 putative oxidoreductase protein
YP_002275292.1	KEGG: gdi:GDI2675 hypothetical protein
YP_002275293.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI2677 putative short-chain dehydrogenase
YP_002275294.1	KEGG: gdi:GDI2678 hypothetical protein
YP_002275295.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI2679 putative short-chain dehydrogenase
YP_002275296.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI2680 putative oxidoreductase
YP_002275297.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG: gdi:GDI2681 putative benzene 1,2-dioxygenase system ferredoxin--NAD(+) reductase subunit
YP_002275298.1	KEGG: gdi:GDI2682 hypothetical protein
YP_002275299.1	PFAM: Ferritin Dps family protein; KEGG: gdi:GDI2684 putative ferritin-like domain
YP_002275300.1	KEGG: met:M446_2088 mandelate racemase/muconate lactonizing protein
YP_002275301.1	PFAM: transposase IS3/IS911 family protein; KEGG: gdi:GDI2859 putative transposase
YP_002275302.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI2757 integrase
YP_002275303.1	PFAM: protein of unknown function DUF72; KEGG: gdi:GDI2688 hypothetical protein
YP_002275304.1	PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: gdi:GDI2689 putative transcriptional regulator, GntR family
YP_002275305.1	PFAM: basic membrane lipoprotein; KEGG: gdi:GDI2690 putative membrane lipoprotein
YP_002275306.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI2691 putative ABC transporter, ATP-binding protein
YP_002275307.1	PFAM: inner-membrane translocator; KEGG: gdi:GDI2692 putative amino acid transporter
YP_002275308.1	PFAM: inner-membrane translocator; KEGG: gdi:GDI2693 putative amino acid transporter
YP_002275309.1	PFAM: isochorismatase hydrolase; KEGG: gdi:GDI2694 putative isochorismatase family protein RutB
YP_002275310.1	PFAM: PfkB domain protein; KEGG: gdi:GDI2695 putative ribokinase
YP_002275311.1	PFAM: purine or other phosphorylase family 1; KEGG: gdi:GDI2696 putative uridine phosphorylase
YP_002275312.1	KEGG: gdi:GDI2697 hypothetical protein
YP_002275313.1	PFAM: Aldehyde Dehydrogenase; KEGG: gdi:GDI2698 putative succinate-semialdehyde dehydrogenase
YP_002275314.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI2699 putative TonB-dependent receptor
YP_002275315.1	PFAM: aminotransferase class V; KEGG: gdi:GDI2701 putative serine-pyruvate aminotransferase
YP_002275316.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI2702 TonB-dependent receptor
YP_002275317.1	TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: gdi:GDI2703 putative peptidase
YP_002275318.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_4546 ABC transporter related
YP_002275319.1	PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rle:RL4485 putative ferredoxin containing dehydrogenase
YP_002275320.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0724 polar amino acid ABC transporter, inner membrane subunit
YP_002275321.1	SMART: extracellular solute-binding protein family 3; KEGG: rle:RL4482 putative solute-binding component of ABC transporter
YP_002275322.1	TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: bja:blr3302 dihydrodipicolinate synthase
YP_002275323.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI2707 putative ABC transporter ATP-binding protein
YP_002275324.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI2708 hypothetical protein
YP_002275325.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI2710 putative inner membrane amino-acid ABC transporter permease
YP_002275326.1	PFAM: extracellular solute-binding protein family 3; KEGG: gdi:GDI2711 putative arginine-binding periplasmic protein 2 precursor
YP_002275327.1	KEGG: gdi:GDI2712 hypothetical protein
YP_002275328.1	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gdi:GDI2713 putative opine oxidase subunit A
YP_002275329.1	PFAM: FAD dependent oxidoreductase; KEGG: gdi:GDI2714 putative FAD dependent oxidoreductase
YP_002275330.1	PFAM: dihydrodipicolinate synthetase; KEGG: gdi:GDI2715 putative dihydrodipicolinate synthase
YP_002275331.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: gdi:GDI2716 putative transcriptional regulator, GntR family
YP_002275332.1	KEGG: gdi:GDI2717 putative dihydropyrimidinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; Amidohydrolase 3
YP_002275333.1	KEGG: gdi:GDI3803 putative transposase
YP_002275334.1	KEGG: gdi:GDI3803 putative transposase
YP_002275335.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3863 putative transposase
YP_002275336.1	PFAM: transposase IS3/IS911 family protein; KEGG: gdi:GDI2859 putative transposase
YP_002275337.1	KEGG: ppf:Pput_3400 hypothetical protein
YP_002275338.1	KEGG: ngo:NGO1626 hypothetical protein, putative phage associated protein
YP_002275339.1	PFAM: phospholipase/Carboxylesterase; KEGG: gdi:GDI0147 putative acyl-protein thioesterase 1
YP_002275340.1	PFAM: DSBA oxidoreductase; KEGG: gdi:GDI0146 putative polyketide synthase
YP_002275341.1	SMART: regulatory protein ArsR; KEGG: gdi:GDI0145 putative regulator protein, ArsR family
YP_002275342.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI0144 putative RND efflux system, outer membrane lipoprotein, NodT family
YP_002275343.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI0143 putative secretion protein, HlyD-family
YP_002275344.1	PFAM: acriflavin resistance protein; KEGG: gdi:GDI0142 putative multidrug resistance protein
YP_002275345.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI2734 transcriptional regulator, LysR family
YP_002275346.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: gdi:GDI2842 putative NAD dependent epimerase/dehydratase protein
YP_002275347.1	PFAM: ThiJ/PfpI domain protein; KEGG: gdi:GDI2843 putative intracellular protease/amidase
YP_002275348.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI2844 putative transcriptional regulator, LysR family
YP_002275349.1	PFAM: protein of unknown function DUF336; KEGG: gdi:GDI2845 hypothetical protein
YP_002275350.1	PFAM: regulatory protein TetR; KEGG: gdi:GDI2846 putative transcriptional regulatory protein, TetR family
YP_002275351.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: gdi:GDI2847 putative carboxymuconolactone decarboxylase
YP_002275352.1	PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI2848 putative multidrug resistance protein
YP_002275353.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI2849 putative multidrug resistance protein
YP_002275354.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI2850 putative multidrug efflux MFS outer membrane protein
YP_002275355.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI2734 transcriptional regulator, LysR family
YP_002275356.1	KEGG: gdi:GDI2735 putative transposase
YP_002275357.1	PFAM: conjugation TrbI family protein; KEGG: gdi:GDI0138 putative type IV secretion system protein
YP_002275358.1	TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: gdi:GDI2737 putative type IV secretion system
YP_002275359.1	PFAM: Conjugal transfer protein; KEGG: gdi:GDI2738 putative conjugal transfer protein TrbF
YP_002275360.1	type IV secretion VirB6 family
YP_002275361.1	TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: gdi:GDI0134 putative type IV secretion system protein
YP_002275362.1	type IV secretion system VirB4 family
YP_002275363.1	KEGG: gdi:GDI0132 putative conjugal transfer protein TrbD
YP_002275364.1	PFAM: Conjugal transfer protein TrbC; KEGG: gdi:GDI0131 putative conjugal transfer protein TrbC
YP_002275365.1	TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: gdi:GDI0130 putative type IV secretion system protein
YP_002275366.1	KEGG: gdi:GDI0129 hypothetical protein
YP_002275367.1	type IV secretion VirD4 coupling protein family
YP_002275369.1	KEGG: gdi:GDI2751 hypothetical protein
YP_002275370.1	KEGG: gdi:GDI2752 hypothetical protein
YP_002275371.1	TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: mlo:mll4070 aspartate racemase
YP_002275372.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pfo:PflO1_2224 transcriptional regulator, AraC family
YP_002275374.1	KEGG: gdi:GDI2753 hypothetical protein
YP_002275375.1	PFAM: Lytic transglycosylase catalytic; KEGG: gdi:GDI2794 lytic transglycosylase, catalytic
YP_002275376.1	PFAM: protein of unknown function DUF736; KEGG: gdi:GDI0400 hypothetical protein
YP_002275377.1	KEGG: gdi:GDI0399 putative conjugal transfer protein TraF
YP_002275378.1	PFAM: C-5 cytosine-specific DNA methylase; KEGG: pde:Pden_3372 C-5 cytosine-specific DNA methylase
YP_002275379.1	KEGG: gdi:GDI0398 hypothetical protein
YP_002275380.1	KEGG: gdi:GDI0397 putative replication protein A
YP_002275381.1	KEGG: gdi:GDI2799 hypothetical protein
YP_002275382.1	KEGG: gdi:GDI2800 hypothetical protein
YP_002275383.1	PFAM: helix-turn-helix domain protein; KEGG: gdi:GDI0392 putative transcriptional regulatory protein
YP_002275384.1	PFAM: protein of unknown function DUF736; KEGG: gdi:GDI0391 hypothetical protein
YP_002275385.1	KEGG: gdi:GDI0389 hypothetical protein
YP_002275386.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: gdi:GDI0388 putative modification methylase
YP_002275387.1	KEGG: gdi:GDI0387 hypothetical protein
YP_002275388.1	KEGG: nwi:Nwi_0759 hypothetical protein
YP_002275389.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mjl:Mjls_1065 transcriptional regulator, AraC family
YP_002275390.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: bid:Bind_2614 NAD-dependent epimerase/dehydratase
YP_002275391.1	KEGG: gdi:GDI0965 putative exodeoxyribonuclease V alpha chain; TIGRFAM: helicase, RecD/TraA family; SMART: Helix-hairpin-helix DNA-binding class 1; AAA ATPase
YP_002275392.1	PFAM: Resolvase domain; Recombinase; KEGG: gdi:GDI0967 putative resolvase
YP_002275393.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI1112 short-chain dehydrogenase
YP_002275394.1	PFAM: helix-turn-helix HxlR type; KEGG: gdi:GDI1111 putative transcriptional regulator protein
YP_002275395.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: gdi:GDI1110 putative 3-oxoacyl-[acyl-carrier-protein] synthase 2
YP_002275396.1	PFAM: acriflavin resistance protein; KEGG: gdi:GDI1109 putative heavy metal efflux protein
YP_002275397.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI1108 putative efflux transporter protein
YP_002275398.1	PFAM: regulatory protein TetR; KEGG: gdi:GDI1107 putative transcriptional regulator protein, TetR family
YP_002275399.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI1106 putative outer membrane factor
YP_002275400.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI1105 putative HTH-type transcriptional regulator BenM (Ben and cat opero transcriptional regulator)
YP_002275401.1	KEGG: gdi:GDI1104 hypothetical protein
YP_002275402.1	PFAM: conjugation TrbI family protein; KEGG: gdi:GDI1011 putative conjugation TrbI-like protein
YP_002275403.1	TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: gdi:GDI1012 putative conjugal transfer protein TrbG
YP_002275404.1	PFAM: Conjugal transfer protein; KEGG: gdi:GDI1013 putative conjugal transfer protein; TrbF
YP_002275405.1	type IV secretion VirB6 family
YP_002275406.1	KEGG: bbt:BBta_7445 hypothetical protein
YP_002275407.1	TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: gdi:GDI1015 putative conjugal transfer protein; TrbJ
YP_002275408.1	type IV secretion system VirB4 family
YP_002275409.1	KEGG: gdi:GDI1017 putative conjugal transfer protein; TrbD
YP_002275410.1	PFAM: Conjugal transfer protein TrbC; KEGG: gdi:GDI1018 conjugal transfer protein TrbC
YP_002275411.1	TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: gdi:GDI1019 putative type II/IV secretion system protein TrbB
YP_002275412.1	PFAM: histone family protein DNA-binding protein; KEGG: gdi:GDI1020 putative DNA-binding protein HU-beta
YP_002275413.1	KEGG: rec:RHECIAT_CH0002229 hypothetical protein
YP_002275414.1	KEGG: rec:RHECIAT_CH0002230 hypothetical protein
YP_002275415.1	KEGG: xau:Xaut_0686 ATPase (AAA+ superfamily)-like protein
YP_002275416.1	PFAM: protein of unknown function DUF1156; KEGG: swi:Swit_0198 protein of unknown function DUF1156
YP_002275417.1	PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: rsh:Rsph17029_1846 helicase domain protein
YP_002275418.1	PFAM: PilT protein domain protein; KEGG: rca:Rcas_1169 PilT protein domain protein
YP_002275419.1	KEGG: sme:SMa0548 hypothetical protein
YP_002275420.1	KEGG: gdi:GDI1022 hypothetical protein
YP_002275421.1	type IV secretion VirD4 coupling protein family
YP_002275422.1	PFAM: plasmid stabilization system; KEGG: rru:Rru_A3239 plasmid stabilization system
YP_002275423.1	TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: CopG domain protein DNA-binding domain protein; protein of unknown function UPF0156; KEGG: gdi:GDI1026 putative transcriptional regulator protein
YP_002275424.1	KEGG: gdi:GDI1027 hypothetical protein
YP_002275425.1	PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: gdi:GDI1545 transposase
YP_002275426.1	PFAM: Lytic transglycosylase catalytic; KEGG: gdi:GDI0112 putative soluble lytic murein transglycosylase precursor
YP_002275427.1	PFAM: protein of unknown function DUF736; KEGG: gdi:GDI0111 hypothetical protein
YP_002275428.1	KEGG: gdi:GDI0110 putative conjugal transfer protein TraF
YP_002275429.1	KEGG: gdi:GDI0109 hypothetical protein
YP_002275430.1	KEGG: cak:Caul_3819 hypothetical protein
YP_002275431.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: gdi:GDI0107 putative cobyrinic acid a,c-diamide synthase
YP_002275432.1	KEGG: gdi:GDI0106 putative replication protein
YP_002275433.1	KEGG: gdi:GDI0105 putative transcriptor regulator
YP_002275434.1	KEGG: gdi:GDI0098 hypothetical protein
YP_002275435.1	KEGG: gdi:GDI0097 hypothetical protein
YP_002275436.1	KEGG: gdi:GDI0096 hypothetical protein
YP_002275437.1	KEGG: gdi:GDI0095 hypothetical protein
YP_002275438.1	KEGG: gdi:GDI2876 hypothetical protein
YP_002275439.1	PFAM: protein of unknown function DUF736; KEGG: bja:blr1950 hypothetical protein
YP_002275440.1	KEGG: gdi:GDI0091 hypothetical protein
YP_002275441.1	KEGG: gdi:GDI0090 hypothetical protein
YP_002275442.1	KEGG: gdi:GDI0089 hypothetical protein
YP_002275443.1	KEGG: gdi:GDI0088 hypothetical protein
YP_002275444.1	KEGG: gdi:GDI2790 hypothetical protein
YP_002275445.1	KEGG: gdi:GDI0086 hypothetical protein
YP_002275446.1	PFAM: metallophosphoesterase; KEGG: gdi:GDI2785 putative metallophosphoesterase
YP_002275447.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI2784 putative dehydrogenase
YP_002275448.1	PFAM: regulatory protein TetR; KEGG: gdi:GDI2783 putative transcriptional regulator, TetR family
YP_002275449.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: fal:FRAAL3018 conserved hypothetical protein; putative NAD(P)-binding Rossmann-fold domain
YP_002275450.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: acr:Acry_2231 transcriptional regulator, LysR family
YP_002275451.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: acr:Acry_2232 short-chain dehydrogenase/reductase SDR
YP_002275452.1	PFAM: transposase IS4 family protein; KEGG: swi:Swit_4905 transposase, IS4 family
YP_002275453.1	PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: gdi:GDI0335 putative arsenical pump membrane protein
YP_002275454.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI0334 putative major facilitator superfamily transporter
YP_002275455.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gdi:GDI0333 putative glyoxalase
YP_002275456.1	KEGG: gdi:GDI0954 hypothetical protein
YP_002275457.1	PFAM: ParB domain protein nuclease; KEGG: gdi:GDI0953 hypothetical protein
YP_002275458.1	KEGG: gdi:GDI0952 hypothetical protein
YP_002275459.1	PFAM: Resolvase domain; Recombinase; KEGG: gdi:GDI0951 putative DNA recombinase
YP_002275460.1	KEGG: pgn:PGN_0087 hypothetical protein
YP_002275461.1	KEGG: gdi:GDI1004 hypothetical protein
YP_002275462.1	PFAM: Glutathione S-transferase domain; KEGG: bra:BRADO0024 putative glutathione S-transferase
YP_002275463.1	TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD; KEGG: gbe:GbCGDNIH1_0942 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
YP_002275464.1	KEGG: gdi:GDI1549 putative regulator protein
YP_002275465.1	KEGG: gdi:GDI1548 hypothetical protein
YP_002275466.1	PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: gdi:GDI1545 transposase
YP_002275467.1	KEGG: gdi:GDI1543 hypothetical protein
YP_002275468.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: gdi:GDI0388 putative modification methylase
YP_002275469.1	KEGG: gdi:GDI1070 hypothetical protein
YP_002275470.1	Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/transcriptional repressor
YP_002275471.1	TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: gdi:GDI1072 putative RelE protein (antitoxin)
YP_002275472.1	PFAM: Resolvase domain; Recombinase; KEGG: pde:Pden_0105 recombinase
YP_002275473.1	PFAM: Patatin; KEGG: gdi:GDI0950 putative patatin-like phospholipase
YP_002275474.1	PFAM: protein of unknown function DUF192; KEGG: gdi:GDI0949 hypothetical protein
YP_002275475.1	PFAM: beta-lactamase domain protein; KEGG: gdi:GDI0948 beta-lactamase-like protein
YP_002275476.1	PFAM: protein of unknown function DUF182; KEGG: gdi:GDI0947 hypothetical protein
YP_002275477.1	KEGG: gbe:GbCGDNIH1_0925 molybdopterin biosynthesis enzyme
YP_002275478.1	PFAM: Endoribonuclease L-PSP; KEGG: gdi:GDI0945 putative endoribonuclease
YP_002275479.1	PFAM: CHAP domain containing protein; KEGG: gdi:GDI0944 putative CHAP protein
YP_002275480.1	PFAM: protein of unknown function DUF163; KEGG: gdi:GDI0943 hypothetical protein
YP_002275481.1	TIGRFAM: iojap-like protein; cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: Iojap-related protein; cytidylyltransferase; KEGG: gdi:GDI0941 putative nicotinate-nucleotide adenylyltransferase
YP_002275482.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_002275483.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
YP_002275484.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_002275485.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
YP_002275486.1	PFAM: Phosphoglycerate mutase; KEGG: gdi:GDI0934 probable phosphoglycerate mutase GpmB
YP_002275487.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP
YP_002275488.1	KEGG: gdi:GDI0932 hypothetical protein
YP_002275489.1	PFAM: protein of unknown function DUF152; KEGG: gdi:GDI0931 hypothetical protein
YP_002275490.1	PFAM: protein of unknown function DUF185; KEGG: gdi:GDI0930 hypothetical protein
YP_002275491.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
YP_002275492.1	TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: gdi:GDI0928 putative ADP-L-glycero-D-manno-heptose-6-epimerase
YP_002275493.1	PFAM: protein of unknown function DUF526; KEGG: gdi:GDI0927 hypothetical protein
YP_002275494.1	PFAM: Protein of unknown function DUF1790; KEGG: gdi:GDI0926 hypothetical protein
YP_002275495.1	KEGG: gdi:GDI0925 putative pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent
YP_002275496.1	KEGG: gdi:GDI0924 hypothetical protein
YP_002275497.1	PFAM: histone family protein DNA-binding protein; KEGG: gdi:GDI0923 putative DNA-binding protein HU-alpha
YP_002275498.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI0922 glycosyl transferase, group 1 family protein
YP_002275499.1	KEGG: gdi:GDI0921 putative hemolysin-type calcium-binding
YP_002275500.1	PFAM: glycosyl transferase family 2; KEGG: gdi:GDI0920 putative glycosyl transferase
YP_002275501.1	catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers
YP_002275502.1	PFAM: protein of unknown function DUF1328; KEGG: gdi:GDI0918 hypothetical protein
YP_002275503.1	KEGG: gdi:GDI0917 hypothetical protein
YP_002275504.1	PFAM: glycosyl transferase family 20; KEGG: gdi:GDI0916 putative alpha,alpha-trehalose-phosphate synthase
YP_002275505.1	KEGG: gdi:GDI0915 trehalose-phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase
YP_002275506.1	KEGG: gdi:GDI0914 hypothetical protein
YP_002275507.1	KEGG: gdi:GDI0913 hypothetical protein
YP_002275508.1	PFAM: Mammalian cell entry related domain protein; KEGG: gdi:GDI0912 hypothetical protein
YP_002275509.1	PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: gdi:GDI0911 putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
YP_002275510.1	KEGG: gdi:GDI0910 putative vitamin B12-dependent ribonucleotide reductase
YP_002275511.1	PFAM: Endoribonuclease L-PSP; KEGG: gdi:GDI0909 putative endoribonuclease
YP_002275512.1	PFAM: protein of unknown function DUF482; KEGG: gdi:GDI0908 hypothetical protein
YP_002275513.1	PFAM: Carbohydrate-selective porin OprB; KEGG: gdi:GDI0906 porin B precursor
YP_002275514.1	PFAM: protein of unknown function DUF1348; KEGG: gdi:GDI0905 hypothetical protein
YP_002275515.1	Converts isocitrate to alpha ketoglutarate
YP_002275516.1	TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI0902 alcohol dehydrogenase
YP_002275517.1	PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: gdi:GDI0901 putative cold-shock DEAD box protein A
YP_002275518.1	KEGG: gdi:GDI0900 hypothetical protein
YP_002275519.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI0899 hypothetical protein
YP_002275520.1	PFAM: sodium/hydrogen exchanger; KEGG: gdi:GDI0898 putative glutathione-regulated potassium-efflux system protein KefB
YP_002275521.1	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: gdi:GDI0897 putative prolyl-tRNA synthetases
YP_002275522.1	KEGG: gdi:GDI0896 hypothetical protein
YP_002275523.1	PFAM: Inhibitor of vertebrate lysozyme; KEGG: gdi:GDI0894 hypothetical protein
YP_002275524.1	PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: gdi:GDI0893 putative vibriobactin utilization protein ViuB
YP_002275525.1	PFAM: transcriptional regulator PadR family protein; KEGG: gdi:GDI0892 putative transcriptional regulator, PadR-like family
YP_002275526.1	KEGG: gdi:GDI0891 hypothetical protein
YP_002275527.1	necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space
YP_002275528.1	involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan
YP_002275529.1	PFAM: regulatory protein LysR; KEGG: gdi:GDI0888 putative transcriptional regulator, LysR family
YP_002275530.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gdi:GDI0887 putative acetyltransferase
YP_002275531.1	PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: gdi:GDI0886 mannitol 2-dehydrogenase
YP_002275532.1	KEGG: gdi:GDI0885 hypothetical protein
YP_002275533.1	KEGG: gdi:GDI0884 putative serine protease do-like precursor; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein
YP_002275534.1	PFAM: lipolytic protein G-D-S-L family; KEGG: gdi:GDI0883 lipase protein
YP_002275535.1	KEGG: gdi:GDI0882 hypothetical protein
YP_002275536.1	KEGG: gdi:GDI0881 hypothetical protein
YP_002275537.1	PFAM: heat shock protein DnaJ domain protein; KEGG: gdi:GDI0880 DnaJ-like protein
YP_002275538.1	KEGG: gdi:GDI0879 hypothetical protein
YP_002275539.1	PFAM: domain of unknown function DUF1730; KEGG: gdi:GDI0878 putative electron transport protein
YP_002275540.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
YP_002275541.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
YP_002275542.1	KEGG: gdi:GDI0875 hypothetical protein
YP_002275543.1	YbhB; similar to rat and human kinase inhibitory proteins
YP_002275544.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: gdi:GDI0873 putative signalling protein, GGDEF family
YP_002275545.1	PFAM: major intrinsic protein; KEGG: gdi:GDI0872 putative aquaporin
YP_002275546.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gdi:GDI0871 putative glyoxalase
YP_002275547.1	TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: gdi:GDI0870 fumarate hydratase class
YP_002275548.1	PFAM: protein of unknown function DUF1321; KEGG: gdi:GDI0869 hypothetical protein
YP_002275549.1	flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor
YP_002275550.1	PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: gdi:GDI0867 hypothetical protein
YP_002275551.1	PFAM: Aldose 1-epimerase; KEGG: gdi:GDI0866 putative aldose 1-epimerase precursor
YP_002275552.1	PFAM: VacJ family lipoprotein; KEGG: gdi:GDI0865 putative lipoprotein VacJ
YP_002275553.1	PFAM: toluene tolerance family protein; KEGG: gdi:GDI0864 putative toluene tolerance
YP_002275554.1	TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gdi:GDI0863 putative haloacid dehalogenase-like hydrolase
YP_002275555.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors
YP_002275556.1	PFAM: major royal jelly protein; KEGG: gdi:GDI0861 putative major royal jelly-like protein
YP_002275557.1	PFAM: cytochrome c class I; KEGG: gdi:GDI0860 putative alcohol dehydrogenase cytochrome c subunit precursor
YP_002275558.1	KEGG: gdi:GDI0859 putative glucose-methanol-choline oxidoreductase
YP_002275559.1	KEGG: gdi:GDI0858 hypothetical protein
YP_002275560.1	PFAM: protein of unknown function DUF336; KEGG: gdi:GDI0857 hypothetical protein
YP_002275561.1	PFAM: cytochrome c class I; KEGG: gdi:GDI0856 putative gluconate 2-dehydrogenase cytochrome c subunit precursor
YP_002275562.1	PFAM: glucose-methanol-choline oxidoreductase; KEGG: gdi:GDI0855 putative gluconate 2-dehydrogenase flavoprotein precursor
YP_002275563.1	KEGG: gdi:GDI0854 putative gluconate 2-dehydrogenase subunit 3 precursor
YP_002275564.1	TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; KEGG: gdi:GDI0852 putative fumarate hydratase class II
YP_002275565.1	KEGG: gdi:GDI0851 hypothetical protein
YP_002275566.1	PFAM: Pirin domain protein; KEGG: gdi:GDI0848 hypothetical protein
YP_002275567.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI0847 putative transcriptional regulator, LysR family
YP_002275568.1	PFAM: cobalbumin biosynthesis protein; KEGG: gdi:GDI0846 putative bifunctional adenosylcobalamin biosynthesis protein CobP
YP_002275569.1	KEGG: gdi:GDI0845 putative nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase
YP_002275570.1	TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: gdi:GDI0844 putative cobalamin synthase
YP_002275572.1	SMART: CHRD domain containing protein; KEGG: gdi:GDI0843 hypothetical protein
YP_002275573.1	KEGG: gdi:GDI0842 hypothetical protein
YP_002275575.1	KEGG: gdi:GDI0840 hypothetical protein
YP_002275576.1	KEGG: gdi:GDI0839 hypothetical protein
YP_002275577.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: gdi:GDI0838 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase
YP_002275578.1	KEGG: gdi:GDI0837 hypothetical protein
YP_002275579.1	KEGG: gdi:GDI0836 hypothetical protein
YP_002275580.1	KEGG: gdi:GDI0835 putative mannose-1-phosphate guanylyltransferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein
YP_002275581.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: gdi:GDI0834 UDP-glucose 4-epimerase
YP_002275582.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG: gdi:GDI0833 putative signalling protein, GGDEF family
YP_002275583.1	PFAM: UMUC domain protein DNA-repair protein; KEGG: gdi:GDI0832 putative DNA polymerase IV
YP_002275584.1	KEGG: gdi:GDI0831 hypothetical protein
YP_002275585.1	KEGG: gdi:GDI0830 hypothetical protein
YP_002275586.1	KEGG: gdi:GDI0829 hypothetical protein
YP_002275587.1	KEGG: gdi:GDI0828 putative tripeptide permease TppB; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1
YP_002275588.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gdi:GDI0827 putative acetyltransferase
YP_002275589.1	PFAM: Ferritin Dps family protein; KEGG: gdi:GDI0826 ferritin-like protein
YP_002275590.1	KEGG: gdi:GDI0825 hypothetical protein
YP_002275591.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: gdi:GDI0824 hypothetical protein
YP_002275592.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: gdi:GDI0823 dipeptidyl peptidase IV
YP_002275593.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gdi:GDI0822 putative ribosomal-protein-alanine acetyltransferase
YP_002275594.1	KEGG: gdi:GDI0821 hypothetical protein
YP_002275595.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gdi:GDI0820 putative phosphinothricin N-acetyltransferase
YP_002275596.1	PFAM: 2OG-Fe(II) oxygenase; KEGG: gdi:GDI0819 putative alkylated DNA repair protein AlkB
YP_002275597.1	KEGG: gdi:GDI0818 putative chaperone protein DnaK
YP_002275598.1	KEGG: gdi:GDI0817 hypothetical protein
YP_002275599.1	PFAM: Aldehyde Dehydrogenase; KEGG: gdi:GDI0816 aldehyde dehydrogenase
YP_002275600.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gox:GOX1693 cell cycle transcriptional regulator CtrA
YP_002275602.1	TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: gdi:GDI0813 putative bifunctional thiED protein
YP_002275603.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
YP_002275604.1	KEGG: gdi:GDI0811 putative dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS
YP_002275605.1	KEGG: gdi:GDI0810 cell division protein FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_002275606.1	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: gdi:GDI0809 putative tRNA(Ile)-lysidine synthase
YP_002275607.1	KEGG: gdi:GDI0808 hypothetical protein
YP_002275608.1	TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: gdi:GDI0807 outer membrane lipoprotein omp16
YP_002275609.1	forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA
YP_002275610.1	KEGG: gdi:GDI0805 hypothetical protein
YP_002275611.1	TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: gdi:GDI0804 putative biopolymer transport protein
YP_002275612.1	TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: gdi:GDI0803 putative protein TolQ
YP_002275613.1	TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: gdi:GDI0802 putative acyl-CoA thioester hydrolase
YP_002275614.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
YP_002275615.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
YP_002275616.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
YP_002275617.1	PFAM: protein of unknown function DUF28; KEGG: gdi:GDI0798 hypothetical protein
YP_002275618.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins
YP_002275619.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: gdi:GDI0795 peptidylprolyl isomerase
YP_002275620.1	bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate
YP_002275621.1	PFAM: RDD domain containing protein; KEGG: gdi:GDI0793 hypothetical protein
YP_002275622.1	PFAM: MscS Mechanosensitive ion channel; KEGG: gdi:GDI0792 putative mechanosensitive ion channel
YP_002275623.1	KEGG: gdi:GDI0791 hypothetical protein
YP_002275624.1	PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: gdi:GDI0790 putative poly(beta-D-mannuronate) O-acetylase
YP_002275625.1	KEGG: met:M446_5517 hypothetical protein
YP_002275626.1	PFAM: protein of unknown function DUF140; KEGG: gdi:GDI0788 hypothetical protein
YP_002275627.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI0787 putative ABC transporter ATP-binding protein
YP_002275628.1	PFAM: Mammalian cell entry related domain protein; KEGG: gdi:GDI0786 paraquat-inducible protein B
YP_002275629.1	PFAM: protein of unknown function DUF330; KEGG: gdi:GDI0785 hypothetical protein
YP_002275630.1	PFAM: purine nucleoside permease; KEGG: gdi:GDI0784 putative purine nucleoside permease
YP_002275631.1	PFAM: adenosine/AMP deaminase; KEGG: gdi:GDI0783 putative adenosine deaminase
YP_002275632.1	PFAM: protein of unknown function DUF1653; KEGG: gdi:GDI0782 hypothetical protein
YP_002275633.1	KEGG: gdi:GDI0781 hypothetical protein
YP_002275634.1	KEGG: gdi:GDI0780 putative cystathionine gamma-synthase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II
YP_002275635.1	protein associated with Co2+ and Mg2+ efflux
YP_002275636.1	PFAM: GTP cyclohydrolase I; KEGG: gdi:GDI0778 GTP cyclohydrolase I
YP_002275637.1	PFAM: surface antigen variable number repeat protein; KEGG: gdi:GDI0777 surface antigen protein
YP_002275638.1	KEGG: gdi:GDI0776 hypothetical protein
YP_002275639.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI0775 putative hydrogen peroxide-inducible genes activator
YP_002275640.1	KEGG: gdi:GDI0774 putative alkyl hydroperoxide reductase subunit C; TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein
YP_002275641.1	TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gdi:GDI0773 putative alkyl hydroperoxide reductase subunit F
YP_002275642.1	PFAM: Catalase domain protein; KEGG: gdi:GDI0079 catalase
YP_002275643.1	TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: gdi:GDI0772 protease protein
YP_002275644.1	TIGRFAM: molybdenum cofactor synthesis domain protein; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: gdi:GDI0771 molybdenum cofactor biosynthesis protein B
YP_002275645.1	PFAM: Carbohydrate-selective porin OprB; KEGG: gdi:GDI0770 putative porin B precursor
YP_002275646.1	KEGG: gdi:GDI0769 hypothetical protein
YP_002275647.1	PFAM: metallophosphoesterase; KEGG: gdi:GDI0768 putative exonuclease
YP_002275648.1	KEGG: gdi:GDI0766 hypothetical protein
YP_002275649.1	KEGG: gdi:GDI0765 hypothetical protein
YP_002275650.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI0764 putative secretion protein, HlyD-family
YP_002275651.1	KEGG: gdi:GDI0763 hypothetical protein
YP_002275652.1	KEGG: gdi:GDI0762 hypothetical protein
YP_002275653.1	KEGG: gdi:GDI0760 hypothetical protein
YP_002275654.1	KEGG: gdi:GDI0759 hypothetical protein
YP_002275655.1	PFAM: transposase IS3/IS911 family protein; KEGG: gdi:GDI2859 putative transposase
YP_002275656.1	KEGG: gdi:GDI0755 hypothetical protein
YP_002275657.1	KEGG: gdi:GDI0754 hypothetical protein
YP_002275658.1	KEGG: gdi:GDI1636 putative transposase protein
YP_002275659.1	PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: gdi:GDI0751 putative deoxyribodipyrimidine photo-lyase
YP_002275660.1	KEGG: gdi:GDI0750 hypothetical protein
YP_002275661.1	PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: gdi:GDI0749 chaperone protein DnaJ
YP_002275662.1	KEGG: gdi:GDI0747 hypothetical protein
YP_002275663.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gdi:GDI0746 putative glycolate oxidase iron-sulfur subunit
YP_002275664.1	PFAM: FAD linked oxidase domain protein; KEGG: gdi:GDI0745 putative glycolate oxidase subunit
YP_002275665.1	PFAM: FAD linked oxidase domain protein; KEGG: gdi:GDI0744 putative glycolate oxidase subunit GlcD
YP_002275666.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: gdi:GDI0743 putative Fe-S oxidoreductase
YP_002275667.1	PFAM: protein of unknown function DUF162; KEGG: gdi:GDI0742 putative 4Fe-4S ferredoxin, iron-sulfur binding
YP_002275668.1	PFAM: protein of unknown function DUF162; KEGG: gdi:GDI0741 hypothetical protein
YP_002275669.1	PFAM: aldo/keto reductase; KEGG: gdi:GDI0740 oxidoreductase
YP_002275670.1	KEGG: gdi:GDI0739 hypothetical protein
YP_002275671.1	SMART: Rhodanese domain protein; KEGG: gdi:GDI0738 hypothetical protein
YP_002275672.1	CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis
YP_002275673.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI0736 putative major facilitator superfamily transporter
YP_002275674.1	PFAM: PRC-barrel domain protein; KEGG: gdi:GDI0735 hypothetical protein
YP_002275675.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gdi:GDI0733 putative two-component response regulator
YP_002275676.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gdi:GDI0732 putative two component sensor histidine kinase
YP_002275677.1	PFAM: SNARE associated Golgi protein; KEGG: gdi:GDI0731 hypothetical protein
YP_002275678.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI0730 putative short-chain dehydrogenase
YP_002275679.1	KEGG: gdi:GDI0729 hypothetical protein
YP_002275680.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
YP_002275681.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gdi:GDI0727 hypothetical protein
YP_002275682.1	TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: gdi:GDI0726 putative uracil-DNA glycosylase
YP_002275683.1	PFAM: Lytic transglycosylase catalytic; KEGG: gdi:GDI0724 putative lytic transglycosylase, catalytic
YP_002275684.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: gdi:GDI0723 hypothetical protein
YP_002275685.1	TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein; KEGG: gdi:GDI0722 putative Fe-S oxidoreductase
YP_002275686.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
YP_002275687.1	KEGG: gdi:GDI0720 hypothetical protein
YP_002275688.1	TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI; PFAM: glycosyl transferase family 2; KEGG: gdi:GDI0719 putative glycosyl transferase protein
YP_002275689.1	KEGG: gdi:GDI0718 Fe-S protein, radical SAM family; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_002275690.1	TIGRFAM: hopanoid biosynthesis associated protein HpnK; PFAM: YdjC family protein; KEGG: gdi:GDI0717 putative cellobiose phosphate
YP_002275691.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: gdi:GDI0716 putative thioredoxin
YP_002275692.1	TIGRFAM: double-strand break repair helicase AddA; PFAM: UvrD/REP helicase; KEGG: gdi:GDI0715 putative UvrD/REP helicase
YP_002275693.1	TIGRFAM: double-strand break repair protein AddB; KEGG: gdi:GDI0714 hypothetical protein
YP_002275694.1	KEGG: gdi:GDI0713 putative nucleotidyl transferase
YP_002275695.1	PFAM: protein of unknown function UPF0079; KEGG: gdi:GDI0712 putative hydrolase protein
YP_002275696.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: gdi:GDI0711 thioredoxin reductase
YP_002275697.1	KEGG: gdi:GDI0710 putative alanine racemase, catabolic; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein
YP_002275698.1	catalyzes the oxidative deamination of D-amino acids
YP_002275699.1	PFAM: nitrogen regulatory protein P-II; KEGG: gdi:GDI0707 putative regulatory protein GlnK2
YP_002275700.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: gdi:GDI0706 putative ammonium transporter
YP_002275701.1	KEGG: gdi:GDI0705 hypothetical protein
YP_002275702.1	KEGG: gox:GOX0635 hypothetical protein
YP_002275703.1	TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: gdi:GDI0703 GTP-binding protein TypA/BipA
YP_002275704.1	PFAM: PfkB domain protein; KEGG: gdi:GDI0702 inosine-guanosine kinase
YP_002275705.1	PFAM: protein of unknown function DUF583; KEGG: gdi:GDI0701 hypothetical protein
YP_002275706.1	PFAM: GcrA cell cycle regulator; KEGG: gdi:GDI0700 putative GcrA cell cycle regulator
YP_002275707.1	TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: gdi:GDI0699 putative ribonuclease D
YP_002275708.1	NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis
YP_002275709.1	TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: gdi:GDI0697 ATP synthase epsilon chain
YP_002275710.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_002275711.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
YP_002275712.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_002275713.1	TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: gdi:GDI0693 ATP synthase delta chain
YP_002275714.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: gdi:GDI0692 putative transcriptional regulator, LacI family
YP_002275715.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI0691 gluconate 5-dehydrogenase
YP_002275716.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI0690 putative MFS transporter
YP_002275717.1	TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: gdi:GDI0689 putative preprotein translocase SecE subunit
YP_002275718.1	Modulates Rho-dependent transcription termination
YP_002275719.1	PFAM: protein of unknown function DUF330; KEGG: gdi:GDI0687 hypothetical protein
YP_002275720.1	PFAM: Mammalian cell entry related domain protein; KEGG: gdi:GDI0686 paraquat-inducible protein B
YP_002275721.1	TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; KEGG: gdi:GDI0685 putative paraquat-inducible protein
YP_002275722.1	PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: gdi:GDI0684 putative major facilitator superfamily (MFS) transporter
YP_002275723.1	KEGG: gdi:GDI0683 hypothetical protein
YP_002275724.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: gdi:GDI0682 putative transcriptional regulator, GntR family
YP_002275725.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI0681 putative glucarate transporter
YP_002275726.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: gdi:GDI0680 putative acyl-CoA transferase
YP_002275727.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gdi:GDI0679 putative 3-hydroxybutyryl-CoA dehydratase
YP_002275728.1	KEGG: gdi:GDI0678 putative error-prone DNA polymerase; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein
YP_002275729.1	KEGG: gdi:GDI0677 hypothetical protein
YP_002275730.1	KEGG: bid:Bind_2800 hypothetical protein
YP_002275731.1	PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: gdi:GDI0675 putative short chain dehydrogenase
YP_002275732.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gdi:GDI0674 putative two-component sensor histidine kinase
YP_002275733.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gdi:GDI0671 putative two-component response regulator
YP_002275734.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI0670 putative glycosyl transferase
YP_002275735.1	PFAM: metallophosphoesterase; KEGG: gdi:GDI0669 putative UDP-2,3-diacylglucosamine hydrolase
YP_002275736.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI0667 TonB-dependent receptor
YP_002275737.1	KEGG: gdi:GDI0666 putative ferrichrome binding protein of ABC transporter
YP_002275738.1	PFAM: transport system permease protein; KEGG: gdi:GDI0665 putative ferrichrome ABC transporter permease protein
YP_002275739.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI0664 putative iron(III) dicitrate transport ATP-binding protein FecE
YP_002275740.1	PFAM: Phosphoglycerate mutase; KEGG: gdi:GDI0663 putative phosphoglycerate mutase protein
YP_002275741.1	TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: gdi:GDI0662 putative protein PhnA
YP_002275742.1	KEGG: gdi:GDI0661 hypothetical protein
YP_002275743.1	PFAM: conserved hypothetical protein; KEGG: gdi:GDI0660 hypothetical protein
YP_002275744.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI0659 transcriptional regulator, LysR family
YP_002275745.1	KEGG: gdi:GDI0658 hypothetical protein
YP_002275746.1	PFAM: 4-oxalocrotonate tautomerase; KEGG: gdi:GDI0657 putative tautomerase protein
YP_002275747.1	KEGG: gdi:GDI0656 putative nitroreductase protein; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase
YP_002275748.1	TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: gdi:GDI0655 putative cobalamin biosynthesis protein
YP_002275749.1	TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: gdi:GDI0654 putative manganese transport protein MntH
YP_002275750.1	Transcriptional regulator that represses the manganese transporter MntH when manganese is present
YP_002275751.1	KEGG: gdi:GDI0652 hypothetical protein
YP_002275752.1	KEGG: gdi:GDI0651 hypothetical protein
YP_002275753.1	PFAM: iron permease FTR1; KEGG: gdi:GDI0650 putative iron permease protein
YP_002275754.1	KEGG: gdi:GDI0649 hypothetical protein
YP_002275755.1	KEGG: gdi:GDI0648 hypothetical protein
YP_002275756.1	KEGG: gdi:GDI0646 hypothetical protein
YP_002275757.1	PFAM: protein of unknown function DUF81; KEGG: gdi:GDI0644 hypothetical protein
YP_002275758.1	KEGG: gdi:GDI0643 putative galactose-proton symporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1
YP_002275759.1	KEGG: rrs:RoseRS_4063 hypothetical protein
YP_002275761.1	PFAM: helix-turn-helix Fis-type; GAF domain protein; KEGG: gdi:GDI0641 putative transcriptional regulatory protein, fis family
YP_002275762.1	PFAM: Aldehyde Dehydrogenase; KEGG: gdi:GDI0640 aldehyde dehydrogenase
YP_002275763.1	KEGG: gdi:GDI0639 hypothetical protein
YP_002275764.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gdi:GDI0638 putative acetyltransferase
YP_002275765.1	PFAM: Prephenate dehydrogenase; KEGG: gdi:GDI0637 putative prephenate dehydrogenase
YP_002275766.1	PFAM: protein of unknown function DUF892; KEGG: gdi:GDI0636 hypothetical protein
YP_002275767.1	KEGG: gox:GOX0875 AtsE protein
YP_002275768.1	PFAM: K potassium transporter; KEGG: gdi:GDI0634 potassium transport system protein
YP_002275769.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI0633 glycosyl transferase
YP_002275770.1	PFAM: permease YjgP/YjgQ family protein; KEGG: gdi:GDI0632 hypothetical protein
YP_002275771.1	PFAM: permease YjgP/YjgQ family protein; KEGG: gdi:GDI0631 hypothetical protein
YP_002275772.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: gdi:GDI0630 CDP-diacylglycerol--serine O-phosphatidyltransferase
YP_002275773.1	KEGG: gdi:GDI0629 putative UTP--glucose-1-phosphate uridylyltransferase
YP_002275774.1	PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: gdi:GDI0628 inositol-3-phosphate synthase
YP_002275775.1	KEGG: gdi:GDI0626 hypothetical protein
YP_002275776.1	PFAM: glycerate kinase; KEGG: gdi:GDI0625 glycerate kinase
YP_002275777.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI0624 putative transporter protein
YP_002275778.1	PFAM: sugar diacid recognition domain protein; KEGG: gdi:GDI0623 putative carbohydrate diacid regulator
YP_002275779.1	KEGG: dre:555643 si:ch211-197g15.1
YP_002275780.1	PFAM: CsbD family protein; KEGG: gdi:GDI0621 putative CsbD-like protein
YP_002275781.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: gdi:GDI0620 putative transcriptional regulator, AsnC family
YP_002275782.1	PFAM: transposase IS4 family protein; KEGG: gox:GOX1566 transposase (class IV)
YP_002275783.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: gdi:GDI0615 putative transcriptional regulator, AsnC family
YP_002275784.1	PFAM: aminotransferase class V; KEGG: gdi:GDI0614 putative cysteine desulfurase
YP_002275785.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
YP_002275786.1	KEGG: gdi:GDI0612 putative 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type I; PFAM: dehydroquinase class I
YP_002275787.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: gdi:GDI0611 putative xylose isomerase
YP_002275788.1	PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP
YP_002275789.1	KEGG: gdi:GDI0608 putative galactose-proton symporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1
YP_002275790.1	PFAM: aminotransferase class I and II; KEGG: gdi:GDI0607 putative aspartate aminotransferase
YP_002275791.1	KEGG: gdi:GDI0606 putative beta-N-acetylhexosaminidase; TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; Beta-N-acetylhexosaminidase-like; Glycoside hydrolase, family 20, catalytic core
YP_002275792.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: gdi:GDI0604 putative lysine exporter protein
YP_002275793.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gdi:GDI0603 hypothetical protein
YP_002275794.1	specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport
YP_002275795.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: gdi:GDI0600 putative transcriptional regulator, GntR family
YP_002275796.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: gdi:GDI0599 putative antibiotic biosynthesis monooxygenase
YP_002275797.1	PFAM: protein of unknown function UPF0261; KEGG: gdi:GDI0598 hypothetical protein
YP_002275798.1	KEGG: gdi:GDI0597 hypothetical protein
YP_002275799.1	KEGG: gdi:GDI0596 hypothetical protein
YP_002275800.1	PFAM: nitroreductase; KEGG: gdi:GDI0595 NAD(P)H nitroreductase
YP_002275801.1	PFAM: metal-dependent protein hydrolase; KEGG: gdi:GDI0594 hypothetical protein
YP_002275802.1	KEGG: gdi:GDI0593 putative NADH-quinone oxidoreductase chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_002275803.1	TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: gdi:GDI0592 putative DNA mismatch repair protein MutL
YP_002275804.1	KEGG: gdi:GDI0591 hypothetical protein
YP_002275805.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_002275806.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme
YP_002275807.1	TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: gdi:GDI0588 putative riboflavin biosynthesis protein
YP_002275808.1	TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gdi:GDI0587 enolase-phosphatase
YP_002275809.1	PFAM: Acireductone dioxygenase ARD; KEGG: gdi:GDI0586 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
YP_002275810.1	catalyzes the formation of diketo methylthiopentyl phosphate from methylribulose phosphate in the methionine salvage pathway
YP_002275811.1	TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: gdi:GDI0584 putative transporter protein
YP_002275812.1	PFAM: CHAP domain containing protein; KEGG: gdi:GDI0583 putative amidase protein
YP_002275813.1	KEGG: gdi:GDI0582 hypothetical protein
YP_002275814.1	PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: gdi:GDI0581 ubiquinone/menaquinone biosynthesis methyltransferase ubi
YP_002275815.1	SMART: Tetratricopeptide domain protein; KEGG: gdi:GDI0580 hypothetical protein
YP_002275816.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif
YP_002275817.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI0578 putative transcriptional regulator, LysR family
YP_002275818.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: gdi:GDI0576 peroxiredoxin protein
YP_002275819.1	TIGRFAM: alkylhydroperoxidase, AhpD family; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: gdi:GDI0575 alkylhydroperoxidase protein
YP_002275820.1	KEGG: gdi:GDI0574 putative L-sorbosone dehydrogenase
YP_002275821.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: gdi:GDI0573 putative low molecular weight phosphotyrosine protein phosphatase
YP_002275822.1	KEGG: gdi:GDI0572 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase
YP_002275823.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: gdi:GDI0571 putative L-aspartate oxidase
YP_002275824.1	KEGG: gdi:GDI0570 quinolinate synthetase A; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A
YP_002275825.1	KEGG: gdi:GDI0569 hypothetical protein
YP_002275826.1	KEGG: gdi:GDI0568 hypothetical protein
YP_002275827.1	KEGG: gdi:GDI0567 hypothetical protein
YP_002275828.1	PFAM: NnrUfamily protein; KEGG: gdi:GDI0566 putative nitrate reductase protein
YP_002275829.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gdi:GDI0565 putative glyoxalase
YP_002275830.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI0564 putative toluene efflux pump outer membrane protein TtgC precursor
YP_002275831.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI0563 putative multidrug resistance protein MdtA precursor
YP_002275832.1	PFAM: acriflavin resistance protein; KEGG: gdi:GDI0562 putative acriflavin resistance protein
YP_002275833.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: gbe:GbCGDNIH1_0195 tetratricopeptide repeat family protein
YP_002275834.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI3498 putative secretion protein
YP_002275835.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: gox:GOX0715 probable secretion ATP-binding protein
YP_002275837.1	PFAM: Hemolysin-type calcium-binding region; KEGG: dol:Dole_0612 hemolysin-type calcium-binding region
YP_002275838.1	KEGG: gdi:GDI2083 hypothetical protein
YP_002275839.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: gox:GOX2487 outer membrane protein TolC
YP_002275840.1	KEGG: gdi:GDI1820 hypothetical protein
YP_002275841.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI0561 putative sulfate/thiosulfate import ATP-binding protein CysA
YP_002275842.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI0560 putative sulfate transport system permease protein CysW
YP_002275843.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI0559 putative sulfate transport system permease protein
YP_002275844.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: gdi:GDI0558 putative sulfate-binding protein precursor
YP_002275845.1	PFAM: phosphate-selective porin O and P; KEGG: gdi:GDI0557 putative porin protein
YP_002275846.1	PFAM: regulatory protein TetR; KEGG: gdi:GDI0556 putative transcriptional regulator, TetR family
YP_002275847.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI0555 putative oxidoreductase
YP_002275848.1	KEGG: gdi:GDI0554 hypothetical protein
YP_002275849.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI0553 putative TonB-dependent receptor
YP_002275850.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI0552 TonB-dependent receptor
YP_002275851.1	PFAM: protein of unknown function DUF188; KEGG: gdi:GDI0551 hypothetical protein
YP_002275852.1	catalyzes the degradation of histidine to urocanate and ammmonia
YP_002275853.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: gdi:GDI0549 putative ubiquinol-cytochrome c reductase
YP_002275854.1	KEGG: gdi:GDI0548 maltooligosyl trehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_002275855.1	KEGG: gdi:GDI0547 putative 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77
YP_002275856.1	KEGG: gdi:GDI0546 putative malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_002275857.1	KEGG: gdi:GDI0545 putative glycogen operon protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_002275858.1	KEGG: gdi:GDI0544 putative 1,4-alpha-glucan branching enzyme 1; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain
YP_002275859.1	TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; KEGG: gdi:GDI0543 putative glycogen synthase
YP_002275860.1	KEGG: gdi:GDI0542 hypothetical protein
YP_002275861.1	PFAM: helix-turn-helix Fis-type; KEGG: gdi:GDI0541 putative transcriptional regulator fis
YP_002275862.1	KEGG: gdi:GDI0540 hypothetical protein
YP_002275863.1	TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: Pyrrolo-quinoline quinone; KEGG: gdi:GDI0539 putative quinoprotein glucose dehydrogenase
YP_002275864.1	KEGG: gdi:GDI0537 hypothetical protein
YP_002275865.1	KEGG: gdi:GDI0536 hypothetical protein
YP_002275866.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: gdi:GDI0535 putative cytochrome d ubiquinol oxidase subunit 1
YP_002275867.1	TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: gdi:GDI0534 putative cytochrome d ubiquinol oxidase subunit 2
YP_002275868.1	KEGG: gdi:GDI0533 hypothetical protein
YP_002275869.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI0532 putative MFS transporter
YP_002275870.1	forms a direct contact with the tRNA during translation
YP_002275871.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_002275872.1	KEGG: gdi:GDI0529 hypothetical protein
YP_002275873.1	KEGG: gdi:GDI0528 hypothetical protein
YP_002275874.1	PFAM: aminotransferase class I and II; KEGG: gdi:GDI0527 aminotransferase
YP_002275875.1	PFAM: nitrogen regulatory protein P-II; KEGG: gdi:GDI0526 putative nitrogen regulatory protein
YP_002275876.1	TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: gdi:GDI0525 glutamine synthetase
YP_002275877.1	PFAM: CBS domain containing protein; Chloride channel core; KEGG: gdi:GDI0524 putative voltage-gated ClC-type chloride channel
YP_002275878.1	TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI0523 quinone oxidoreductase
YP_002275879.1	PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: gdi:GDI0522 lipase protein
YP_002275880.1	PFAM: HhH-GPD family protein; KEGG: gdi:GDI0521 putative DNA-3-methyladenine glycosylase
YP_002275881.1	TIGRFAM: TonB family protein; KEGG: gdi:GDI0520 hypothetical protein
YP_002275882.1	Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile
YP_002275883.1	PFAM: thioesterase superfamily protein; KEGG: gdi:GDI0518 putative acyl-CoA thioester hydrolase
YP_002275884.1	PFAM: metallophosphoesterase; KEGG: gdi:GDI0517 putative phosphoesterase
YP_002275885.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: gdi:GDI0516 putative 5-formyltetrahydrofolate cyclo-ligase
YP_002275886.1	PFAM: protein of unknown function DUF710; KEGG: gdi:GDI0515 putative cell division protein ZapA
YP_002275887.1	KEGG: gdi:GDI0514 hypothetical protein
YP_002275888.1	KEGG: gdi:GDI0513 hypothetical protein
YP_002275889.1	TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; KEGG: gdi:GDI0512 putative thiamine-phosphate pyrophosphorylase
YP_002275890.1	PFAM: beta-Ig-H3/fasciclin; KEGG: gdi:GDI0511 putative cell adhesion
YP_002275891.1	KEGG: gdi:GDI0510 hypothetical protein
YP_002275892.1	PFAM: tRNA synthetase class II (D K and N); KEGG: gdi:GDI0509 putative lysyl-tRNA synthetase
YP_002275893.1	KEGG: gdi:GDI0508 putative L-lysine 2,3-aminomutase; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein
YP_002275894.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_002275895.1	PFAM: inositol monophosphatase; KEGG: gdi:GDI0506 inositol-1-monophosphatase
YP_002275896.1	KEGG: gdi:GDI0505 hypothetical protein
YP_002275897.1	KEGG: gdi:GDI0504 putative MotA/TolQ/ExbB proton channel family protein
YP_002275898.1	PFAM: OmpA/MotB domain protein; KEGG: gdi:GDI0503 putative outer membrane protein
YP_002275899.1	KEGG: gdi:GDI0502 hypothetical protein
YP_002275900.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gdi:GDI0501 radical SAM superfamily protein
YP_002275901.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI0500 putative glycosyl transferase
YP_002275902.1	KEGG: gdi:GDI0499 hypothetical protein
YP_002275903.1	PFAM: glycosyltransferase sugar-binding region containing DXD motif; KEGG: gdi:GDI0498 putative glycosyl transferase
YP_002275904.1	PFAM: peptidase S24 and S26 domain protein; KEGG: gdi:GDI0497 putative peptidase
YP_002275905.1	KEGG: gdi:GDI0496 hypothetical protein
YP_002275906.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI0495 putative glycosyl transferase
YP_002275907.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: gdi:GDI0494 putative transcriptional regulator
YP_002275908.1	PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: gdi:GDI0493 putative flavohemoprotein
YP_002275909.1	PFAM: protein of unknown function DUF488; KEGG: gdi:GDI0492 hypothetical protein
YP_002275910.1	catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis
YP_002275911.1	KEGG: gdi:GDI0490 putative general secretion pathway protein K
YP_002275912.1	TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: gdi:GDI0489 putative general secretion pathway protein D
YP_002275913.1	KEGG: gdi:GDI0488 putative general secretion pathway protein N
YP_002275914.1	KEGG: gdi:GDI0487 putative general secretion pathway protein M
YP_002275915.1	PFAM: Fimbrial assembly family protein; KEGG: gdi:GDI0486 putative general secretion pathway protein L
YP_002275916.1	KEGG: gdi:GDI0485 putative pseudopilin J precursor
YP_002275917.1	KEGG: gdi:GDI0484 putative pseudopilin I precursor
YP_002275918.1	KEGG: gdi:GDI0483 putative pseudopilin H precursor
YP_002275919.1	PFAM: type II secretion system protein; KEGG: gdi:GDI0482 putative general secretion pathway protein F
YP_002275920.1	PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: gdi:GDI0481 putative type II secretion pathway kinase GspE
YP_002275921.1	PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: gdi:GDI0480 putative prepilin peptidase and N-methyltransferase O
YP_002275922.1	TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: gdi:GDI0479 putative pseudopilin G precursor
YP_002275923.1	PFAM: Lytic transglycosylase catalytic; KEGG: gdi:GDI0478 putative BfpH protein (involved in biogenesis of type IV pili)
YP_002275924.1	KEGG: gdi:GDI0477 levanase precursor; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32
YP_002275925.1	PFAM: glycoside hydrolase family 68; KEGG: gdi:GDI0476 levansucrase precursor protein
YP_002275926.1	KEGG: gdi:GDI0475 putative spermidine synthase
YP_002275927.1	PFAM: regulatory protein TetR; KEGG: gdi:GDI0474 putative transcription regulator
YP_002275928.1	PFAM: Abortive infection protein; KEGG: gdi:GDI0472 putative protease
YP_002275929.1	PFAM: protein of unknown function DUF1275; KEGG: gdi:GDI0471 hypothetical protein
YP_002275930.1	TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: gdi:GDI0470 putative regulatory protein ada (regulatory protein of adaputative response)
YP_002275931.1	PFAM: Pirin domain protein; KEGG: gdi:GDI0469 putative pirin-like protein
YP_002275932.1	PFAM: cytochrome B561; KEGG: gdi:GDI0468 putative cytochrome protein
YP_002275933.1	PFAM: Catalase domain protein; KEGG: gdi:GDI0467 putative catalase
YP_002275934.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: gdi:GDI0466 putative ABC transporter, ATP-binding protein
YP_002275935.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI0465 putative ABC transporter, permease protein
YP_002275936.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI0464 putative ABC transporter, permease protein
YP_002275937.1	PFAM: extracellular solute-binding protein family 5; KEGG: gdi:GDI0463 putative extracellular solute-binding protein
YP_002275938.1	catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine
YP_002275939.1	PFAM: Aldehyde Dehydrogenase; KEGG: gdi:GDI0461 putative aldehyde dehydrogenase
YP_002275940.1	PFAM: FAD dependent oxidoreductase; KEGG: gdi:GDI0460 putative oxidoreductase
YP_002275941.1	TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gdi:GDI0459 putative haloalkanoic acid dehalogenase
YP_002275942.1	PFAM: FAD dependent oxidoreductase; KEGG: gdi:GDI0458 putative deaminase
YP_002275943.1	PFAM: aldo/keto reductase; KEGG: gdi:GDI0457 oxidoreductase (aldo/keto reductase) protein
YP_002275944.1	PFAM: chemotaxis sensory transducer; KEGG: gdi:GDI0456 chemoreceptor McpA
YP_002275945.1	TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; KEGG: gdi:GDI0455 putative pyrophosphorylase ModD
YP_002275946.1	KEGG: gdi:GDI0454 ferredoxin-like protein
YP_002275947.1	PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: gdi:GDI0453 protein FixC
YP_002275948.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: gdi:GDI0452 FixB
YP_002275949.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: gdi:GDI0451 protein FixA
YP_002275950.1	associates with NifD and may protect the nitrogenase Fe-Mo protein from oxidative damage
YP_002275951.1	TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase; KEGG: gdi:GDI0449 homocitrate synthase
YP_002275952.1	TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gdi:GDI0448 cysteine desulfurase (nitrogenase metalloclusters biosynthesis protein NifS)
YP_002275953.1	TIGRFAM: Fe-S cluster assembly protein NifU; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: gdi:GDI0447 nitrogen fixation protein NifU
YP_002275954.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: gdi:GDI0446 putative HesB protein
YP_002275955.1	PFAM: NifQ family protein; KEGG: gdi:GDI0445 protein NifQ
YP_002275956.1	TIGRFAM: ferredoxin III, nif-specific; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gdi:GDI0444 putative ferredoxin protein
YP_002275957.1	PFAM: protein of unknown function DUF683; KEGG: gdi:GDI0443 hypothetical protein
YP_002275958.1	TIGRFAM: nitrogen fixation protein; PFAM: protein of unknown function DUF269; KEGG: gdi:GDI0442 hypothetical protein
YP_002275959.1	TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: gdi:GDI0441 protein NifX
YP_002275960.1	functions with NifE to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe
YP_002275961.1	functions with NifN to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe
YP_002275962.1	KEGG: gdi:GDI0438 nitrogenase FeMo beta subunit protein; NifK; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1
YP_002275963.1	KEGG: gdi:GDI0437 FeMo protein of nitrogenase alpha subunit; NifD; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1
YP_002275964.1	nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis
YP_002275965.1	KEGG: gdi:GDI0435 hypothetical protein
YP_002275966.1	TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU family protein; KEGG: gdi:GDI0434 putative FixU protein
YP_002275967.1	PFAM: NifZ family protein; KEGG: gdi:GDI0433 putative NifZ protein
YP_002275968.1	PFAM: leucine rich repeat variant; LRV FeS4 cluster domain protein; KEGG: gdi:GDI0432 hypothetical protein
YP_002275969.1	PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gdi:GDI0431 putative ferredoxin-like
YP_002275970.1	TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; KEGG: gdi:GDI0430 putative FeMo cofactor biosynthesis protein NifB
YP_002275971.1	KEGG: gdi:GDI0429 Nif-specific regulatory protein; TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_002275972.1	KEGG: gdi:GDI0428 hypothetical protein
YP_002275973.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: gdi:GDI0427 putative molybdate-binding periplasmic protein precursor
YP_002275974.1	TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI0426 putative molybdenum transport system permease protein ModB
YP_002275975.1	KEGG: gdi:GDI0425 putative molybdenum import ATP-binding protein ModC; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_002275976.1	TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: gdi:GDI0424 RNA polymerase sigma-54 factor 1
YP_002275977.1	PFAM: aminotransferase class-III; KEGG: gdi:GDI0423 putative aminotransferase
YP_002275978.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: gdi:GDI0422 putative transcriptional regulator, AsnC family
YP_002275979.1	KEGG: gdi:GDI0420 putative tartrate dehydrogenase/decarboxylase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase
YP_002275980.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI0419 putative TonB-dependent receptor
YP_002275981.1	TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: gdi:GDI0418 putative succinate-semialdehyde dehydrogenase
YP_002275982.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gdi:GDI0417 putative acetyl transferase
YP_002275983.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: gdi:GDI0416 putative 2-hydroxyacid dehydrogenase
YP_002275984.1	PFAM: Linocin_M18 bacteriocin protein; KEGG: gdi:GDI0415 bacteriocin protein
YP_002275985.1	TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: gdi:GDI0414 putative peroxidase family protein
YP_002275986.1	PFAM: regulatory protein TetR; KEGG: gdi:GDI0413 putative transcriptional regulator, family TetR
YP_002275987.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3822 putative transposase
YP_002275988.1	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: gdi:GDI2704 putative transposase
YP_002275989.1	PFAM: transposase IS3/IS911 family protein; KEGG: gdi:GDI0409 putative transposase
YP_002275990.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI0408 putative integrase
YP_002275991.1	TIGRFAM: prevent-host-death family protein; KEGG: gdi:GDI0406 putative prevent-host-death protein
YP_002275992.1	KEGG: gdi:GDI0405 hypothetical protein
YP_002275993.1	KEGG: gdi:GDI0404 hypothetical protein
YP_002275994.1	KEGG: gdi:GDI0403 hypothetical protein
YP_002275995.1	PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: gdi:GDI1545 transposase
YP_002275996.1	PFAM: Lytic transglycosylase catalytic; KEGG: xau:Xaut_2873 lytic transglycosylase catalytic
YP_002275997.1	PFAM: protein of unknown function DUF736; KEGG: xau:Xaut_3010 protein of unknown function DUF736
YP_002275998.1	KEGG: xau:Xaut_3011 conjugal transfer protein precursor
YP_002275999.1	KEGG: xau:Xaut_3012 hypothetical protein
YP_002276000.1	KEGG: mes:Meso_0523 replication protein A
YP_002276001.1	KEGG: mes:Meso_2338 hypothetical protein
YP_002276004.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: gdi:GDI0388 putative modification methylase
YP_002276005.1	KEGG: eli:ELI_09785 hypothetical protein
YP_002276007.1	KEGG: rpc:RPC_0232 hypothetical protein
YP_002276008.1	PFAM: helix-turn-helix domain protein; KEGG: rpc:RPC_0231 transcriptional regulator
YP_002276009.1	PFAM: Resolvase domain; Recombinase; KEGG: pde:Pden_0105 recombinase
YP_002276010.1	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: gdi:GDI0075 putative FAD dependent oxidoreductase
YP_002276011.1	PFAM: nitroreductase; KEGG: gdi:GDI0074 putative nitroreductase family protein
YP_002276012.1	catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis
YP_002276013.1	KEGG: gdi:GDI0072 hypothetical protein
YP_002276014.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_002276015.1	TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: GCN5-related N-acetyltransferase; histidine biosynthesis protein; KEGG: gdi:GDI0070 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
YP_002276016.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
YP_002276017.1	TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: gdi:GDI0068 putative phosphoribosyl-ATP pyrophosphatase
YP_002276018.1	PFAM: histidine triad (HIT) protein; KEGG: gdi:GDI0067 putative histidine triad (HIT) protein
YP_002276019.1	PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: gdi:GDI0066 putative helicase protein
YP_002276020.1	PFAM: PilT protein domain protein; KEGG: gdi:GDI0065 hypothetical protein
YP_002276021.1	PFAM: SpoVT/AbrB domain protein; KEGG: gdi:GDI0064 putative virulence-associated protein
YP_002276022.1	TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: gdi:GDI0063 hypothetical protein
YP_002276023.1	TIGRFAM: CRISPR-associated protein, Csd1 family; PFAM: CRISPR-associated protein CT1133; KEGG: gdi:GDI0062 hypothetical protein
YP_002276024.1	TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein, Csd2 family; PFAM: CRISPR-associated protein TM1801; KEGG: gdi:GDI0061 hypothetical protein
YP_002276025.1	TIGRFAM: CRISPR-associated protein Cas4; PFAM: protein of unknown function DUF83; KEGG: gdi:GDI0060 hypothetical protein
YP_002276026.1	TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: gdi:GDI0059 hypothetical protein
YP_002276027.1	TIGRFAM: CRISPR-associated protein Cas2; KEGG: gdi:GDI0058 hypothetical protein
YP_002276028.1	PFAM: transposase IS3/IS911 family protein; KEGG: gdi:GDI0409 putative transposase
YP_002276029.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI0053 putative ABC transporter
YP_002276030.1	KEGG: gdi:GDI0052 putative endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein
YP_002276031.1	PFAM: ComEC/Rec2-related protein; KEGG: gdi:GDI0051 putative DNA uptake protein
YP_002276032.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_002276033.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
YP_002276034.1	KEGG: gdi:GDI0048 putative dihydro-orotase protein; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase
YP_002276035.1	PFAM: protein of unknown function DUF205; KEGG: gdi:GDI0047 hypothetical protein
YP_002276036.1	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: gdi:GDI0046 putative DNA processing chain A
YP_002276037.1	catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity
YP_002276038.1	KEGG: gdi:GDI0044 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein
YP_002276039.1	PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: gdi:GDI0043 carboxy-terminal processing protease
YP_002276040.1	KEGG: gdi:GDI0042 hypothetical protein
YP_002276041.1	PFAM: surface antigen msp4 family protein; OmpA/MotB domain protein; KEGG: gdi:GDI0041 outer membrane protein
YP_002276042.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI0040 putative transcriptional regulator, LysR family
YP_002276043.1	KEGG: gdi:GDI0039 hypothetical protein
YP_002276044.1	PFAM: Fusaric acid resistance protein conserved region; KEGG: gdi:GDI0038 putative fusaric acid resistance protein
YP_002276045.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: gdi:GDI0037 putative sugar transporter protein
YP_002276046.1	KEGG: gdi:GDI0036 putative phosphoglycerate mutase
YP_002276047.1	TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: gdi:GDI0035 putative threonine-phosphate decarboxylase
YP_002276048.1	TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: gdi:GDI0034 putative cobyric acid synthase
YP_002276049.1	KEGG: gdi:GDI0033 putative cob(I)yrinic acid a,c-diamide adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
YP_002276050.1	KEGG: gdi:GDI0031 hypothetical protein
YP_002276051.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: gdi:GDI1127 putative transposase
YP_002276052.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI0408 putative integrase
YP_002276053.1	KEGG: gdi:GDI1097 hypothetical protein
YP_002276054.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3864 putative transposase
YP_002276055.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3822 putative transposase
YP_002276056.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI2443 putative integrase
YP_002276057.1	PFAM: regulatory protein MarR; Penicillinase repressor; KEGG: xau:Xaut_0061 transcriptional regulator, MarR family
YP_002276058.1	PFAM: OsmC family protein; KEGG: xau:Xaut_0062 OsmC family protein
YP_002276059.1	KEGG: gdi:GDI2675 hypothetical protein
YP_002276060.1	PFAM: regulatory protein TetR; KEGG: azo:azo2505 putative TetR family transcriptional regulator
YP_002276061.1	TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI0159 dehydrogenase (zinc-binding alcohol dehydrogenase)
YP_002276062.1	PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bur:Bcep18194_C6613 metal dependent phosphohydrolase
YP_002276063.1	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: gdi:GDI3806 putative transposase
YP_002276064.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI2757 integrase
YP_002276065.1	KEGG: rru:Rru_A0811 helix-turn-helix protein, CopG
YP_002276066.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bja:blr8273 transcriptional regulatory protein
YP_002276067.1	PFAM: beta-lactamase domain protein; KEGG: mex:Mext_0756 beta-lactamase domain protein
YP_002276068.1	PFAM: aldo/keto reductase; KEGG: gdi:GDI0457 oxidoreductase (aldo/keto reductase) protein
YP_002276069.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pmy:Pmen_2205 transcriptional regulator, LysR family
YP_002276070.1	KEGG: gdi:GDI0968 hypothetical protein
YP_002276071.1	PFAM: RES domain protein; KEGG: sme:SMa1455 hypothetical protein
YP_002276072.1	KEGG: azo:azo1851 hypothetical protein
YP_002276073.1	PFAM: transposase IS3/IS911 family protein; KEGG: gdi:GDI2859 putative transposase
YP_002276074.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oan:Oant_1136 short-chain dehydrogenase/reductase SDR
YP_002276075.1	PFAM: Glutathione S-transferase domain; KEGG: gdi:GDI2768 putative glutathionine S-transferase
YP_002276076.1	PFAM: Glutathione S-transferase domain; KEGG: gdi:GDI2767 putative glutathionine S-transferase
YP_002276077.1	KEGG: ret:RHE_PF00055 hypothetical protein
YP_002276078.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: gdi:GDI2765 putative RNA polymerase sigma-70 factor
YP_002276079.1	TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: gdi:GDI2764 putative peptide methionine sulfoxide reductase MsrA
YP_002276080.1	TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: gdi:GDI2763 putative peptide methionine sulfoxide reductase MsrB
YP_002276081.1	KEGG: gdi:GDI2761 hypothetical protein
YP_002276082.1	PFAM: oxidoreductase molybdopterin binding; KEGG: gdi:GDI2760 putative oxidoreductase, molybdopterin-binding
YP_002276083.1	TIGRFAM: pentapeptide MXKDX repeat protein; KEGG: gdi:GDI2759 hypothetical protein
YP_002276084.1	PFAM: nitroreductase; KEGG: gdi:GDI0994 NAD(P)H nitroreductase
YP_002276085.1	KEGG: gdi:GDI0996 hypothetical protein
YP_002276086.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI0997 putative outer membrane protein OprJ
YP_002276087.1	PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI0998 putative secretion protein, HlyD-family
YP_002276088.1	KEGG: gdi:GDI0999 hypothetical protein
YP_002276089.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI1000 putative multidrug efflux transporter protein
YP_002276090.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI1001 putative transcriptional regulator, LysR family
YP_002276091.1	PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: gdi:GDI1002 putative transcriptional regulator protein, GntR family
YP_002276092.1	PFAM: Glutathione S-transferase domain; KEGG: gdi:GDI1003 putative glutathione S-transferase
YP_002276093.1	KEGG: gdi:GDI1004 hypothetical protein
YP_002276094.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI1005 putative transcriptional regulator, LysR family
YP_002276095.1	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: gdi:GDI1006 putative NAD(P)H oxidoreductase
YP_002276096.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI1007 putative transcriptional regulator, LysR family
YP_002276097.1	KEGG: gdi:GDI1009 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein
YP_002276098.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI0986 putative major facilitator transporter superfamily
YP_002276099.1	PFAM: regulatory protein ArsR; KEGG: gdi:GDI0988 putative transcriptional regulator, ArsR family
YP_002276100.1	KEGG: gdi:GDI3803 putative transposase
YP_002276101.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mlo:mll1141 probable transcriptional regulator
YP_002276102.1	PFAM: major facilitator superfamily MFS_1; KEGG: zmo:ZMO1856 hypothetical protein
YP_002276103.1	PFAM: transposase IS3/IS911 family protein; KEGG: gdi:GDI2859 putative transposase
YP_002276104.1	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: gdi:GDI2704 putative transposase
YP_002276105.1	KEGG: gdi:GDI3803 putative transposase
YP_002276106.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI2757 integrase
YP_002276107.1	KEGG: gdi:GDI3803 putative transposase
YP_002276108.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3822 putative transposase
YP_002276109.1	KEGG: gdi:GDI2722 putative transposase
YP_002276110.1	KEGG: rba:RB7752 hypothetical protein-transmembrane prediction
YP_002276111.1	KEGG: rba:RB7750 hypothetical protein
YP_002276112.1	KEGG: gdi:GDI3803 putative transposase
YP_002276113.1	KEGG: gdi:GDI1022 hypothetical protein
YP_002276114.1	type IV secretion VirD4 coupling protein family
YP_002276115.1	PFAM: plasmid stabilization system; KEGG: gdi:GDI1024 hypothetical protein
YP_002276116.1	TIGRFAM: addiction module antidote protein, CC2985 family; KEGG: gdi:GDI1025 hypothetical protein
YP_002276117.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI0216 putative transcriptional regulator, LysR family
YP_002276118.1	KEGG: gdi:GDI2722 putative transposase
YP_002276119.1	KEGG: gdi:GDI0218 hypothetical protein
YP_002276120.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: gdi:GDI0219 hypothetical protein
YP_002276121.1	KEGG: gdi:GDI1027 hypothetical protein
YP_002276122.1	PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: gdi:GDI1545 transposase
YP_002276123.1	KEGG: gdi:GDI1543 hypothetical protein
YP_002276125.1	KEGG: gdi:GDI1540 hypothetical protein
YP_002276126.1	KEGG: gdi:GDI1539 hypothetical protein
YP_002276127.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI1537 putative transposase
YP_002276128.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3863 putative transposase
YP_002276129.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI2757 integrase
YP_002276130.1	KEGG: gdi:GDI1062 hypothetical protein
YP_002276131.1	PFAM: transposase IS3/IS911 family protein; KEGG: gdi:GDI0409 putative transposase
YP_002276132.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI0408 putative integrase
YP_002276133.1	PFAM: heat shock protein Hsp20; KEGG: gdi:GDI1067 putative small heat shock protein
YP_002276134.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3863 putative transposase
YP_002276135.1	KEGG: gdi:GDI1070 hypothetical protein
YP_002276136.1	Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/transcriptional repressor
YP_002276137.1	TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: gdi:GDI1072 putative RelE protein (antitoxin)
YP_002276138.1	PFAM: Resolvase domain; KEGG: pde:Pden_0105 recombinase
YP_002276139.1	PFAM: transposase mutator type; KEGG: gdi:GDI2780 putative transposase
YP_002276140.1	PFAM: transposase IS3/IS911 family protein; KEGG: gdi:GDI2859 putative transposase
YP_002276141.1	KEGG: gox:GOX1463 ATP-dependent Clp protease, ATP-binding subunit ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_002276142.1	PFAM: protein of unknown function DUF336; KEGG: gdi:GDI1641 hypothetical protein
YP_002276143.1	PFAM: aldo/keto reductase; KEGG: gdi:GDI1640 oxidoreductase
YP_002276144.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI1639 transcriptional regulator, LysR family
YP_002276145.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3863 putative transposase
YP_002276146.1	PFAM: transposase IS3/IS911 family protein; KEGG: gdi:GDI2859 putative transposase
YP_002276147.1	KEGG: gdi:GDI0004 hypothetical protein
YP_002276148.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: gox:GOX1508 hypothetical protein
YP_002276149.1	KEGG: gdi:GDI0014 hypothetical protein
YP_002276150.1	TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: gdi:GDI0015 putative shikimate dehydrogenase
YP_002276151.1	KEGG: gdi:GDI0016 putative sugar transporter protein; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1
YP_002276152.1	PFAM: ATP-NAD/AcoX kinase; KEGG: gdi:GDI0017 putative inorganic polyphosphate/ATP-NAD kinase
YP_002276153.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: gdi:GDI0018 nitrilase/cyanide hydratase
YP_002276154.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: gdi:GDI0019 putative cation transporter protein
YP_002276155.1	KEGG: gdi:GDI0020 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase
YP_002276156.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
YP_002276157.1	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: gdi:GDI0022 putative acetolactate synthase isozyme III large subunit
YP_002276158.1	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit
YP_002276159.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
YP_002276160.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3864 putative transposase
YP_002276161.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3863 putative transposase
YP_002276162.1	KEGG: gdi:GDI1577 hypothetical protein
YP_002276163.1	KEGG: gdi:GDI1582 hypothetical protein
YP_002276164.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3822 putative transposase
YP_002276165.1	KEGG: gdi:GDI1585 hypothetical protein
YP_002276166.1	KEGG: gdi:GDI1586 hypothetical protein
YP_002276167.1	PFAM: TrwC relaxase; KEGG: gdi:GDI1588 putative conjugal transfer protein TrwC
YP_002276168.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI2705 putative integrase
YP_002276169.1	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: gdi:GDI2704 putative transposase
YP_002276170.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3863 putative transposase
YP_002276171.1	KEGG: gox:GOX1622 transposase
YP_002276172.1	PFAM: transposase IS3/IS911 family protein; KEGG: gox:GOX1621 transposase
YP_002276173.1	KEGG: psb:Psyr_0027 hypothetical protein
YP_002276174.1	PFAM: integrase family protein; KEGG: gdi:GDI1593 putative phage integrase
YP_002276175.1	PFAM: protein of unknown function DUF45; KEGG: gdi:GDI1594 putative zinc metallopeptidase
YP_002276176.1	PFAM: protein of unknown function UPF0153; KEGG: gdi:GDI1595 hypothetical protein
YP_002276177.1	KEGG: gdi:GDI1596 hypothetical protein
YP_002276178.1	KEGG: gdi:GDI1597 putative extracellular solute-binding protein, PotD/PotF family
YP_002276179.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; KEGG: gdi:GDI1598 putative ABC-transporter ATP-binding protein
YP_002276180.1	KEGG: gdi:GDI1599 hypothetical protein
YP_002276181.1	KEGG: gdi:GDI1600 hypothetical protein
YP_002276182.1	PFAM: regulatory protein MarR; KEGG: gdi:GDI1601 putative transcriptional regulator
YP_002276183.1	PFAM: Fusaric acid resistance protein conserved region; KEGG: gdi:GDI1602 putative fusaric acid resistance protein
YP_002276184.1	PFAM: protein of unknown function DUF1656; KEGG: gdi:GDI1603 hypothetical protein
YP_002276185.1	PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI1604 putative secretion protein, HlyD-family
YP_002276186.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI1605 putative outer membrane protein
YP_002276187.1	KEGG: gdi:GDI1606 hypothetical protein
YP_002276188.1	KEGG: gdi:GDI1607 hypothetical protein
YP_002276189.1	KEGG: gdi:GDI1608 hypothetical protein
YP_002276190.1	PFAM: glycosyl transferase family 2; KEGG: gdi:GDI1609 putative glycosyl transferase
YP_002276191.1	KEGG: gdi:GDI1610 hypothetical protein
YP_002276192.1	PFAM: peptidase M20; peptidase M28; KEGG: gdi:GDI1611 putative aminopeptidase
YP_002276193.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI1612 outer membrane protein
YP_002276194.1	PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI1613 putative secretion protein, HlyD-family
YP_002276195.1	KEGG: gdi:GDI1614 putative transporter protein
YP_002276196.1	PFAM: Carbohydrate-selective porin OprB; KEGG: gdi:GDI1616 OprB; OrderedLocusNames=PA3186
YP_002276197.1	PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: gdi:GDI1617 phosphoketolase
YP_002276198.1	TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: gdi:GDI1618 acetate kinase
YP_002276199.1	KEGG: gdi:GDI1619 hypothetical protein
YP_002276200.1	TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; KEGG: gdi:GDI1620 putative squalene--hopene cyclase
YP_002276201.1	TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: gdi:GDI1621 putative amine oxidase
YP_002276202.1	TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: gdi:GDI1622 putative phytoene synthase
YP_002276203.1	TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; KEGG: gdi:GDI1623 putative phytoene synthase
YP_002276204.1	TIGRFAM: hopene-associated glycosyltransferase HpnB; PFAM: glycosyl transferase family 2; KEGG: gdi:GDI1624 putative glycosyl transferase
YP_002276205.1	TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KR domain protein; KEGG: gdi:GDI1625 putative dihydroflavonol-4-reductase
YP_002276206.1	KEGG: gdi:GDI1626 hypothetical protein
YP_002276207.1	PFAM: Prephenate dehydrogenase; KEGG: gdi:GDI1627 putative prephenate dehydrogenase
YP_002276208.1	malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate
YP_002276209.1	PFAM: Phosphoglycerate mutase; KEGG: gdi:GDI1629 alpha-ribazole phosphatase
YP_002276210.1	KEGG: gdi:GDI1630 hypothetical protein
YP_002276211.1	TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: gdi:GDI1631 glucose-1-phosphate thymidylyltransferase
YP_002276212.1	KEGG: gdi:GDI1632 hypothetical protein
YP_002276213.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI1633 putative tTnB-dependent receptor
YP_002276214.1	PFAM: Phytanoyl-CoA dioxygenase; KEGG: gdi:GDI1634 putative deoxygenase protein
YP_002276215.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3864 putative transposase
YP_002276216.1	KEGG: gdi:GDI1636 putative transposase protein
YP_002276217.1	PFAM: acriflavin resistance protein; KEGG: gdi:GDI1129 putative multidrug resistance protein MdtC
YP_002276218.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: gdi:GDI1130 putative purine-cytosine permease
YP_002276219.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI1131 putative short-chain dehydrogenase
YP_002276220.1	Essential for recycling GMP and indirectly, cGMP
YP_002276221.1	TIGRFAM: cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: cytidylyltransferase; PfkB domain protein; KEGG: gdi:GDI1133 putative bifunctional protein HldE kinase
YP_002276222.1	PFAM: N-acylglucosamine 2-epimerase; KEGG: gdi:GDI1134 putative mannose-6-phosphate isomerase
YP_002276223.1	unwinds double stranded DNA
YP_002276224.1	PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: gdi:GDI1136 hypothetical protein
YP_002276225.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_002276226.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI1138 putative ABC transport
YP_002276227.1	PFAM: protein of unknown function DUF140; KEGG: gdi:GDI1139 hypothetical protein
YP_002276228.1	KEGG: gdi:GDI1140 putative UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase
YP_002276229.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI1141 putative bicyclomycin resistance protein
YP_002276230.1	KEGG: gdi:GDI1142 hypothetical protein
YP_002276231.1	PFAM: regulatory protein TetR; KEGG: gdi:GDI1143 putative transcriptional regulator, TetR family
YP_002276232.1	TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: gdi:GDI1144 formate dehydrogenase alpha subunit
YP_002276233.1	TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: gdi:GDI1145 putative formate dehydrogenase accessory protein
YP_002276234.1	KEGG: gdi:GDI1146 hypothetical protein
YP_002276235.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gdi:GDI1147 pyridine nucleotide-disulphide oxidoreductase
YP_002276236.1	PFAM: MscS Mechanosensitive ion channel; KEGG: gdi:GDI1148 putative mechanosensitive ion channel
YP_002276237.1	TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: gdi:GDI1149 hypothetical protein
YP_002276238.1	KEGG: gdi:GDI1150 hypothetical protein
YP_002276239.1	KEGG: gdi:GDI1151 putative 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase
YP_002276240.1	KEGG: gdi:GDI1152 putative 3,4-dihydroxy-2-butanone 4 phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II
YP_002276241.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_002276242.1	KEGG: gdi:GDI1154 riboflavin biosynthesis protein; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding
YP_002276243.1	PFAM: Entericidin EcnAB; KEGG: sec:SC4214 putative entericidin A precursor
YP_002276244.1	PFAM: Na+/solute symporter; KEGG: gdi:GDI1156 putative sodium cotransporter
YP_002276245.1	PFAM: beta-lactamase; KEGG: gdi:GDI1157 putative beta-lactamase/acylhydrolase
YP_002276246.1	PFAM: thioesterase superfamily protein; KEGG: gdi:GDI1158 putative thioesterase superfamily protein
YP_002276247.1	PFAM: acyltransferase 3; KEGG: gdi:GDI1159 putative transmembrane acyltransferase
YP_002276248.1	PFAM: glycoside hydrolase family 16; KEGG: gdi:GDI1160 putative endo-1,3-1,4-beta-glycanase protein
YP_002276249.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI1161 putative MFS transporter
YP_002276250.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI0222 putative integrase
YP_002276251.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI1162 putative TonB-dependent receptor
YP_002276252.1	PFAM: S1/P1 nuclease; KEGG: gdi:GDI1163 putative endonuclease
YP_002276253.1	PFAM: metallophosphoesterase; KEGG: gdi:GDI1164 hypothetical protein
YP_002276254.1	PFAM: diacylglycerol kinase catalytic region; KEGG: gdi:GDI1165 putative diacylglycerol kinase family protein
YP_002276255.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: gdi:GDI1166 putative transmembrane protein
YP_002276256.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: gdi:GDI1167 putative transcriptional regulator protein, AraC family
YP_002276257.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: gdi:GDI1168 hypothetical protein
YP_002276258.1	TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; KEGG: gdi:GDI1169 putative formyltetrahydrofolate deformylase
YP_002276259.1	KEGG: gdi:GDI1170 hypothetical protein
YP_002276260.1	KEGG: gdi:GDI1171 hypothetical protein
YP_002276261.1	KEGG: gdi:GDI1173 hypothetical protein
YP_002276262.1	PFAM: NMT1/THI5 like domain protein; KEGG: gdi:GDI1174 hypothetical protein
YP_002276263.1	PFAM: glycosyl transferase family 39; KEGG: gdi:GDI1175 hypothetical protein
YP_002276264.1	PFAM: glycosyl transferase family 2; KEGG: gdi:GDI1176 putative glycosyl transferase
YP_002276265.1	PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: gdi:GDI1177 putative ATP synthase
YP_002276266.1	PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: gdi:GDI1178 putative ATP synthase
YP_002276267.1	PFAM: H+transporting two-sector ATPase C subunit; KEGG: gdi:GDI1179 putative ATP synthase
YP_002276268.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
YP_002276269.1	KEGG: gdi:GDI1181 putative ATP synthase
YP_002276270.1	KEGG: gdi:GDI1182 hypothetical protein
YP_002276271.1	involved in de novo purine biosynthesis
YP_002276272.1	PFAM: aminotransferase class IV; KEGG: gdi:GDI1184 putative aminotransferase, class IV
YP_002276273.1	PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: gdi:GDI1185 putative para-aminobenzoate synthase
YP_002276274.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: gdi:GDI1186 putative phosphoenolpyruvate-protein phosphotransferase
YP_002276275.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: gdi:GDI1187 putative phosphoryl transfer system, HPr
YP_002276276.1	PFAM: PTS system fructose subfamily IIA component; KEGG: gdi:GDI1188 putative phosphotransferase enzyme IIA
YP_002276277.1	PFAM: conserved hypothetical protein; KEGG: gdi:GDI1189 putative ATPase protein
YP_002276278.1	KEGG: gdi:GDI1190 putative HPr kinase
YP_002276279.1	PFAM: Endoribonuclease L-PSP; KEGG: gdi:GDI1191 putative endoribonuclease
YP_002276280.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI1192 putative ABC tranporter protein
YP_002276281.1	PFAM: ABC-2 type transporter; KEGG: gdi:GDI1193 putative ABC tranporter protein
YP_002276282.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: gdi:GDI1194 putative two-component system sensor protein
YP_002276283.1	PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: gdi:GDI1195 putative two-component system regulatory protein
YP_002276284.1	KEGG: gdi:GDI1196 hypothetical protein
YP_002276285.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: gdi:GDI1197 D-2-hydroxyacid dehydrogensase
YP_002276286.1	KEGG: gdi:GDI1198 putative 2-keto-4-pentenoate hydratase-like
YP_002276287.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: gdi:GDI1199 putative sugar transport protein
YP_002276288.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: gdi:GDI1200 oxidoreductase protein
YP_002276289.1	PFAM: protein of unknown function DUF336; KEGG: gdi:GDI1201 hypothetical protein
YP_002276290.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI1202 L-idonate 5-dehydrogenase
YP_002276291.1	KEGG: gdi:GDI1203 hypothetical protein
YP_002276292.1	PFAM: protein of unknown function YGGT; KEGG: gdi:GDI1204 hypothetical protein
YP_002276293.1	KEGG: gdi:GDI1205 hypothetical protein
YP_002276294.1	KEGG: gdi:GDI1206 hypothetical protein
YP_002276295.1	KEGG: gdi:GDI1207 hypothetical protein
YP_002276296.1	KEGG: gdi:GDI1209 hypothetical protein
YP_002276297.1	PFAM: protein of unknown function DUF1006; KEGG: gdi:GDI1210 hypothetical protein
YP_002276298.1	PFAM: protein of unknown function DUF159; KEGG: gdi:GDI1211 hypothetical protein
YP_002276299.1	PFAM: Aldose 1-epimerase; KEGG: gdi:GDI1212 putative aldose 1-epimerase
YP_002276300.1	PFAM: conserved hypothetical protein; KEGG: gdi:GDI1213 hypothetical protein
YP_002276301.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gdi:GDI1214 putative hydrolase protein
YP_002276302.1	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III
YP_002276303.1	PFAM: Maf family protein; KEGG: gdi:GDI1216 putative septum formation inhibitor protein
YP_002276304.1	PFAM: protein of unknown function DUF214; KEGG: gdi:GDI1217 putative permease protein
YP_002276305.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI1218 putative ABC transporter, ATP-binding protein
YP_002276306.1	PFAM: lipolytic protein G-D-S-L family; KEGG: gdi:GDI1219 putative GDSL-like lipase/acylhydrolase
YP_002276307.1	PFAM: DoxX family protein; KEGG: gdi:GDI1220 hypothetical protein
YP_002276308.1	KEGG: gdi:GDI1222 hypothetical protein
YP_002276309.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI1223 putative TonB-dependent receptor
YP_002276310.1	KEGG: gdi:GDI1224 hypothetical protein
YP_002276311.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: gdi:GDI1225 putative chromosome partitioning protein ParB
YP_002276312.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: gdi:GDI1226 putative chromosome partitioning protein ParA
YP_002276313.1	TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: gdi:GDI1227 putative methyltransferase GidB (glucose-inhibited division protein B)
YP_002276314.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_002276315.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
YP_002276316.1	TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: gdi:GDI1230 putative methylated-DNA--protein-cysteine methyltransferase
YP_002276317.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI1231 quinone oxidoreductase
YP_002276318.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI1232 putative dehydrogenase
YP_002276319.1	PFAM: SNARE associated Golgi protein; KEGG: gdi:GDI1233 hypothetical protein
YP_002276320.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: gdi:GDI1234 putative peptidase
YP_002276321.1	PFAM: regulatory protein LuxR; response regulator receiver; KEGG: gdi:GDI1235 putative transcriptional regulatory protein
YP_002276322.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gdi:GDI1236 putative histidine kinase
YP_002276323.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI1237 putative TonB-dependent receptor
YP_002276324.1	PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: gdi:GDI1238 putative PKHD-type hydroxylase
YP_002276325.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: gdi:GDI1239 hypothetical protein
YP_002276326.1	KEGG: gdi:GDI1240 putative acetyl-CoA acetyltransferase (acetoacetyl-CoA thiolase); TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase
YP_002276327.1	KEGG: gdi:GDI1241 putative sugar-proton symporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1
YP_002276328.1	PFAM: protein of unknown function UPF0061; KEGG: gdi:GDI1242 hypothetical protein
YP_002276329.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gdi:GDI1243 putative enoyl-CoA hydratase
YP_002276330.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: gdi:GDI1244 putative flavin reductase
YP_002276331.1	PFAM: ABC-3 protein; KEGG: gdi:GDI1245 putative ABC transporter protein
YP_002276332.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI1246 putative ABC transporter protein
YP_002276333.1	PFAM: periplasmic solute binding protein; KEGG: gdi:GDI1247 putative periplasmic solute binding protein
YP_002276334.1	KEGG: gdi:GDI1248 putative regulator protein
YP_002276335.1	KEGG: gdi:GDI1249 hypothetical protein
YP_002276336.1	PFAM: L-asparaginase II; KEGG: gdi:GDI1250 putative L-asparaginase II protein
YP_002276337.1	PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: gdi:GDI1251 putative inosine-uridine preferring nucleoside hydrolase
YP_002276338.1	KEGG: gdi:GDI1252 putative folylpoly-gamma-glutamate synthetase; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein
YP_002276339.1	TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: gdi:GDI1253 acetyl-coenzyme A carboxylase carboxyl transferase
YP_002276340.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
YP_002276341.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_002276342.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: gdi:GDI1256 putative magnesium transport protein CorA
YP_002276343.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_002276344.1	PFAM: putative methyltransferase; KEGG: gdi:GDI1258 putative tRNA (guanine-N(7)-)-methyltransferase
YP_002276345.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
YP_002276346.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
YP_002276347.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
YP_002276348.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
YP_002276349.1	PFAM: GrpE protein; KEGG: gdi:GDI1263 chaperone binding
YP_002276350.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gdi:GDI1264 transcriptional regulatory protein
YP_002276351.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gdi:GDI1265 putative histidine kinase sensory protein
YP_002276352.1	PFAM: TonB-dependent receptor; KEGG: gdi:GDI1266 putative TonB-dependent receptor
YP_002276353.1	TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; KEGG: gdi:GDI1267 putative coenzyme PQQ synthesis protein E
YP_002276354.1	PFAM: coenzyme PQQ synthesis D; KEGG: gdi:GDI1268 putative coenzyme PQQ synthesis protein D
YP_002276355.1	Required in the synthesis of PPQ, but its exact function is unknown
YP_002276356.1	possibly involved in transport of pyrroloquinoline quinone transport
YP_002276357.1	Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis; probably provides the glutamate and tyrosine residues that are cross-linked and modified to form the coenzyme
YP_002276358.1	PFAM: protein of unknown function UPF0118; KEGG: gdi:GDI1272 hypothetical protein
YP_002276359.1	PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: gdi:GDI1273 putative transcriptional activatory
YP_002276360.1	PFAM: OmpW family protein; KEGG: gdi:GDI1275 outer membrane protein
YP_002276361.1	KEGG: gdi:GDI1276 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_002276362.1	KEGG: gdi:GDI1277 hypothetical protein
YP_002276363.1	PFAM: HI0933 family protein; FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: gdi:GDI1278 electron transfer flavoprotein-ubiquinone oxidoreductase
YP_002276364.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: gdi:GDI1279 electron transfer flavoprotein subunit beta
YP_002276365.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: gdi:GDI1280 electron transfer flavoprotein subunit alpha
YP_002276366.1	KEGG: gdi:GDI1281 hypothetical protein
YP_002276367.1	PFAM: multi antimicrobial extrusion protein MatE; KEGG: gdi:GDI1282 putative multidrug transport protein
YP_002276368.1	PFAM: regulatory protein TetR; KEGG: gdi:GDI1283 putative transcriptional regulator
YP_002276369.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI1284 putative acriflavine resistance protein
YP_002276370.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: gdi:GDI1285 putative acriflavine resistance protein B
YP_002276371.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI1286 putative outer membrane protein OprM
YP_002276372.1	PFAM: Aldehyde Dehydrogenase; KEGG: gdi:GDI1287 putative aldehyde dehydrogenase A
YP_002276373.1	PFAM: protein of unknown function DUF1275; KEGG: gdi:GDI1289 hypothetical protein
YP_002276374.1	KEGG: gdi:GDI1290 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta
YP_002276375.1	PFAM: protein of unknown function DUF1058; KEGG: gdi:GDI1291 hypothetical protein
YP_002276376.1	KEGG: gdi:GDI1292 hypothetical protein
YP_002276377.1	PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: gdi:GDI1293 molybdopterin biosynthesis protein MoeB
YP_002276378.1	KEGG: gdi:GDI1294 hypothetical protein
YP_002276379.1	KEGG: gdi:GDI1295 hypothetical protein
YP_002276380.1	KEGG: gdi:GDI1296 hypothetical protein
YP_002276381.1	PFAM: pseudouridine synthase; KEGG: gdi:GDI1297 putative RNA pseudouridine synthase
YP_002276382.1	PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: gdi:GDI1298 putative DNA translocase FtsK
YP_002276383.1	TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: gdi:GDI1299 hypothetical protein
YP_002276384.1	PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: gdi:GDI1300 putative ribosomal large subunit pseudouridine synthase B
YP_002276385.1	PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: gdi:GDI1301 putative gamma-glutamyl-gamma-aminobutyrate hydrolase
YP_002276387.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: gdi:GDI1302 putative cytidine deaminase protein
YP_002276388.1	TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: gdi:GDI1303 serine protease
YP_002276389.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gdi:GDI1304 putative threonine aldolase
YP_002276390.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
YP_002276391.1	KEGG: gdi:GDI1306 hypothetical protein
YP_002276392.1	KEGG: gdi:GDI1307 peptidase
YP_002276393.1	PFAM: NUDIX hydrolase; KEGG: gdi:GDI1308 putative NUDIX/MutT-family protein
YP_002276394.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI1309 putative major facilitator protein
YP_002276395.1	PFAM: conserved hypothetical protein; KEGG: gdi:GDI1310 hypothetical protein
YP_002276396.1	KEGG: gdi:GDI1311 hypothetical protein
YP_002276398.1	KEGG: gdi:GDI1315 hypothetical protein
YP_002276399.1	PFAM: Na+/solute symporter; KEGG: gdi:GDI1316 putative sodium symporter protein
YP_002276400.1	KEGG: gdi:GDI1317 hypothetical protein
YP_002276401.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_002276402.1	PFAM: protein of unknown function DUF299; KEGG: gdi:GDI1319 hypothetical protein
YP_002276403.1	KEGG: gdi:GDI1320 hypothetical protein
YP_002276404.1	KEGG: gdi:GDI1321 hypothetical protein
YP_002276405.1	protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic
YP_002276406.1	KEGG: gdi:GDI1323 hypothetical protein
YP_002276407.1	TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; KEGG: gdi:GDI1324 putative A/G-specific adenine glycosylase
YP_002276408.1	PFAM: protein of unknown function DUF1159; KEGG: gdi:GDI1325 hypothetical protein
YP_002276409.1	KEGG: gdi:GDI1327 hypothetical protein
YP_002276410.1	PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: gdi:GDI1328 putative N-(5'-phosphoribosyl)anthranilate isomerase
YP_002276411.1	KEGG: gdi:GDI1329 putative orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase
YP_002276412.1	KEGG: gdi:GDI1330 hypothetical protein
YP_002276413.1	KEGG: gdi:GDI1331 hypothetical protein
YP_002276414.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: gdi:GDI1332 peptidase protein
YP_002276415.1	KEGG: gdi:GDI1333 putative 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA
YP_002276416.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
YP_002276417.1	KEGG: gdi:GDI1335 hypothetical protein
YP_002276418.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: gdi:GDI1336 peptidase protein, modulator of DNA gyrase
YP_002276419.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI1338 putative TonB-dependent receptor
YP_002276420.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: gdi:GDI1339 hypothetical protein
YP_002276421.1	PFAM: glycoside hydrolase family 37; KEGG: gdi:GDI1340 putative periplasmic trehalase protein
YP_002276422.1	PFAM: cytochrome oxidase assembly; KEGG: gdi:GDI1341 putative cytochrome c oxidase assembly protein
YP_002276423.1	PFAM: SNARE associated Golgi protein; KEGG: gdi:GDI1342 hypothetical protein
YP_002276424.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI1343 putative antibiotic resistance transport membrane protein
YP_002276425.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
YP_002276426.1	PFAM: Fusaric acid resistance protein conserved region; KEGG: gdi:GDI1345 putative fusaric acid resistance
YP_002276427.1	an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
YP_002276428.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: gdi:GDI1348 putative biotin carboxyl carrier protein of acetyl-CoA carboxylase
YP_002276429.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
YP_002276430.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: gdi:GDI1350 putative RlpA-like protein
YP_002276431.1	PFAM: ribonuclease BN; KEGG: gdi:GDI1351 putative ribonuclease protein
YP_002276432.1	PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gdi:GDI1352 putative ornithine decarboxylase
YP_002276433.1	TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: gdi:GDI1353 putative heme exporter protein B
YP_002276434.1	KEGG: gdi:GDI1354 putative cytochrome c biogenesis ATP-binding export protein CcmA; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase
YP_002276435.1	Catalyzes the conversion of citrate to isocitrate
YP_002276436.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI1356 putative ABC transporter protein
YP_002276437.1	KEGG: gdi:GDI1357 putative inner membrane amino-acid ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor
YP_002276438.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI1358 transcriptional regulator protein
YP_002276439.1	KEGG: gox:GOX1574 hypothetical protein
YP_002276440.1	PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: gdi:GDI1360 putative chaperone ClpB
YP_002276441.1	KEGG: gdi:GDI1361 hypothetical protein
YP_002276442.1	in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins
YP_002276443.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
YP_002276444.1	PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; protein of unknown function DUF448; KEGG: gdi:GDI1364 hypothetical protein
YP_002276445.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YP_002276446.1	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock
YP_002276447.1	PFAM: Mammalian cell entry related domain protein; KEGG: gdi:GDI1367 putative paraquat-inducible protein
YP_002276448.1	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs
YP_002276449.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_002276450.1	KEGG: gdi:GDI1371 putative polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein
YP_002276451.1	KEGG: gdi:GDI1372 2-nitropropane dioxygenase
YP_002276452.1	KEGG: gdi:GDI1373 hypothetical protein
YP_002276453.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI1374 putative LysR-family transcriptional regulator
YP_002276454.1	KEGG: gdi:GDI1375 hypothetical protein
YP_002276455.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: gdi:GDI1376 putative AraC-family transcriptional regulator
YP_002276456.1	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
YP_002276457.1	KEGG: gdi:GDI1378 putative ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
YP_002276458.1	Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
YP_002276459.1	PFAM: aldo/keto reductase; KEGG: gdi:GDI1380 aldo/keto reductase family
YP_002276460.1	KEGG: gdi:GDI1381 putative penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_002276461.1	TIGRFAM: TonB family protein; KEGG: gdi:GDI1383 hypothetical protein
YP_002276462.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: gdi:GDI1384 biopolymer transport ExbB protein
YP_002276463.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: gdi:GDI1385 putative biopolymer transport
YP_002276464.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: gdi:GDI1386 putative biopolymer transport exbD2 protein
YP_002276465.1	KEGG: gdi:GDI1387 hypothetical protein
YP_002276466.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gdi:GDI1388 putative regulatory protein
YP_002276467.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gdi:GDI1389 putative histidine kinase
YP_002276468.1	KEGG: gdi:GDI1390 hypothetical protein
YP_002276469.1	PFAM: nitrogen-fixing NifU domain protein; Scaffold protein Nfu/NifU; KEGG: gdi:GDI1392 putative nitrogen fixation protein
YP_002276470.1	PFAM: nitroreductase; KEGG: gdi:GDI1393 NADH dehydrogenase/NAD(P)H nitroreductase RutE
YP_002276471.1	PFAM: peptidase M22 glycoprotease; KEGG: gdi:GDI1394 glycoprotease protein
YP_002276472.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gdi:GDI1395 putative acetyltransferase protein
YP_002276473.1	PFAM: SirA family protein; KEGG: gdi:GDI1396 hypothetical protein
YP_002276474.1	PFAM: ROSMUCR transcriptional regulator; KEGG: gdi:GDI1397 ROS/MucR transcriptional regulator protein
YP_002276475.1	PFAM: ferric-uptake regulator; KEGG: gdi:GDI1398 putative ferric uptake regulation protein
YP_002276476.1	KEGG: gdi:GDI1399 hypothetical protein
YP_002276477.1	TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: gdi:GDI1400 putative carbon-nitrogen hydrolase
YP_002276478.1	PFAM: helix-turn-helix domain protein; KEGG: gdi:GDI1401 putative transcriptional regulator
YP_002276479.1	KEGG: gdi:GDI1402 hypothetical protein
YP_002276480.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase
YP_002276481.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol
YP_002276482.1	TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: gdi:GDI1405 putative succinate dehydrogenase hydrophobic membrane anchor protein
YP_002276483.1	TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: gdi:GDI1406 putative succinate dehydrogenase cytochrome b556 subunit
YP_002276484.1	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde
YP_002276485.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_002276486.1	PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: gdi:GDI1409 putative transposase
YP_002276487.1	KEGG: gdi:GDI1410 hypothetical protein
YP_002276488.1	KEGG: gdi:GDI1411 hypothetical protein
YP_002276489.1	KEGG: gdi:GDI1412 hypothetical protein
YP_002276490.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: gdi:GDI1413 putative carboxymuconolactone decarboxylase protein
YP_002276491.1	PFAM: AFG1-family ATPase; KEGG: gdi:GDI1414 putative ATPase
YP_002276492.1	KEGG: gdi:GDI1416 2-oxoglutarate dehydrogenase E1 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase E1 component; Transketolase central region
YP_002276493.1	TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: gdi:GDI1417 2-oxoglutarate dehydrogenase E2 component
YP_002276494.1	TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; FAD dependent oxidoreductase; KEGG: gdi:GDI1418 2-oxoglutarate dehydrogenase E3 component
YP_002276495.1	KEGG: gdi:GDI1419 hypothetical protein
YP_002276496.1	KEGG: gdi:GDI1420 hypothetical protein
YP_002276497.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: gdi:GDI1421 putative peroxiredoxin
YP_002276498.1	PFAM: Sporulation domain protein; Lytic transglycosylase catalytic; KEGG: gdi:GDI1422 putative lytic transglycosylase, catalytic
YP_002276499.1	PFAM: Amylo-alpha-16-glucosidase; KEGG: gdi:GDI1424 putative amylo-alpha-1,6-glucosidase protein
YP_002276500.1	KEGG: gdi:GDI1425 hypothetical protein
YP_002276501.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: gdi:GDI1426 putative cytidine deaminase
YP_002276502.1	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: gdi:GDI1427 putative permease protein
YP_002276503.1	KEGG: gdi:GDI1428 hypothetical protein
YP_002276504.1	catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine
YP_002276505.1	PFAM: peptidase M19 renal dipeptidase; KEGG: gdi:GDI1430 putative peptidase
YP_002276506.1	PFAM: heat shock protein Hsp20; KEGG: gdi:GDI1431 putative heat shock protein
YP_002276507.1	KEGG: gdi:GDI1433 hypothetical protein
YP_002276508.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI1434 TonB-dependent receptor
YP_002276509.1	PFAM: protein of unknown function DUF329; KEGG: gdi:GDI1436 hypothetical protein
YP_002276510.1	KEGG: gdi:GDI1437 putative ribonuclease
YP_002276511.1	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: gdi:GDI1438 inhibitor of septum formation, Maf-like protein
YP_002276512.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_002276513.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
YP_002276514.1	short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ
YP_002276515.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_002276516.1	Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis
YP_002276517.1	KEGG: gdi:GDI1444 hypothetical protein
YP_002276519.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI1445 putative glycosyl transferase
YP_002276520.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gdi:GDI1446 hypothetical protein
YP_002276521.1	PFAM: glycosyl transferase family 9; KEGG: gdi:GDI1447 putative glycosyl transferase
YP_002276522.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
YP_002276523.1	TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: gdi:GDI1449 translation initiation factor IF-3
YP_002276524.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gdi:GDI1450 putative acetyltransferase
YP_002276525.1	TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: gdi:GDI1451 putative prophage maintenance system killer protein
YP_002276526.1	PFAM: SpoVT/AbrB domain protein; KEGG: gdi:GDI1452 putative regulator protein
YP_002276527.1	PFAM: protein of unknown function DUF541; KEGG: gdi:GDI1453 hypothetical protein
YP_002276528.1	KEGG: gdi:GDI1454 hypothetical protein
YP_002276529.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gdi:GDI1455 putative two-component sensor histidine kinase
YP_002276530.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gdi:GDI1456 two-component response regulator
YP_002276531.1	PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: gdi:GDI1457 putative protease protein
YP_002276532.1	KEGG: gdi:GDI1458 putative ATP-dependent helicase; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases
YP_002276533.1	KEGG: gdi:GDI1459 hypothetical protein
YP_002276534.1	KEGG: gdi:GDI1460 hypothetical protein
YP_002276535.1	PFAM: Hsp33 protein; KEGG: gdi:GDI1461 chaperone protein
YP_002276536.1	KEGG: gdi:GDI1462 hypothetical protein
YP_002276537.1	TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: gdi:GDI1463 putative ornithine carbamoyltransferase
YP_002276538.1	DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine
YP_002276539.1	PFAM: band 7 protein; KEGG: gdi:GDI1466 hypothetical protein
YP_002276540.1	PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: gdi:GDI1467 aminopeptidase
YP_002276541.1	PFAM: asparagine synthase; KEGG: gdi:GDI1468 putative asparagine synthetase protein
YP_002276542.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI1471 TonB-dependent receptor protein
YP_002276543.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: gdi:GDI1473 putative D-3-phosphoglycerate dehydrogenase
YP_002276544.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI1474 putative ABC transporter
YP_002276545.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: gdi:GDI1475 hypothetical protein
YP_002276546.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_002276547.1	KEGG: gdi:GDI1477 hypothetical protein
YP_002276548.1	KEGG: gbe:GbCGDNIH1_1903 hypothetical secreted protein
YP_002276549.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: gdi:GDI1479 putative transcriptional regulator
YP_002276550.1	TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: gdi:GDI1480 cysteine synthase
YP_002276551.1	PFAM: YceI family protein; KEGG: gdi:GDI1481 hypothetical protein
YP_002276552.1	PFAM: cytochrome B561; KEGG: gdi:GDI1482 putative cytochrome b561
YP_002276553.1	PFAM: YceI family protein; KEGG: gdi:GDI1483 hypothetical protein
YP_002276554.1	stationary phase protein that binds TrpR repressor
YP_002276555.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: gdi:GDI1485 putative antibiotic biosynthesis monooxygenase
YP_002276556.1	KEGG: gdi:GDI1486 D-ribose-binding protein
YP_002276557.1	KEGG: gdi:GDI1487 putative carbohydrate kinase
YP_002276558.1	PFAM: regulatory protein DeoR; regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: gdi:GDI1488 putative transcriptional regulator ArsR
YP_002276559.1	KEGG: gdi:GDI1489 hypothetical protein
YP_002276560.1	PFAM: carbohydrate kinase FGGY; KEGG: gdi:GDI1490 putative carbohydrate kinase protein
YP_002276561.1	TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gdi:GDI1491 putative haloacid dehalogenase-like hydrolase
YP_002276562.1	PFAM: inner-membrane translocator; KEGG: gdi:GDI1492 ribose transport system permease protein RbsC
YP_002276563.1	PFAM: inner-membrane translocator; KEGG: gdi:GDI1493 ribose transport system permease protein RbsC
YP_002276564.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI1494 ribose transport ATP-binding protein RbsA
YP_002276565.1	KEGG: gdi:GDI1495 ribose ABC transporter, substrate-binding protein
YP_002276566.1	KEGG: gdi:GDI1496 hypothetical protein
YP_002276567.1	KEGG: gdi:GDI1497 putative L-serine deaminase/L-threonine deaminase; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain
YP_002276568.1	KEGG: gdi:GDI1498 putative chemoreceptor McpA; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_002276569.1	PFAM: sulfotransferase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gdi:GDI1500 putative sulfotransferase
YP_002276570.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI1501 putative transcriptional regulator, LysR family
YP_002276571.1	function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain
YP_002276572.1	catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines
YP_002276573.1	KEGG: gdi:GDI1504 hypothetical protein
YP_002276574.1	KEGG: gdi:GDI1505 hypothetical protein
YP_002276575.1	PFAM: CBS domain containing protein; transport-associated; KEGG: gdi:GDI1506 hypothetical protein
YP_002276576.1	KEGG: gdi:GDI1507 hypothetical protein
YP_002276577.1	TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: gdi:GDI1508 putative copper resistance protein A
YP_002276578.1	PFAM: copper resistance B precursor; KEGG: gdi:GDI1509 putative copper resistance protein B
YP_002276579.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI1510 putative inner membrane transport protein
YP_002276580.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gdi:GDI1511 putative sensor histidine kinase
YP_002276581.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gdi:GDI1512 putative two component response regulator
YP_002276582.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: gdi:GDI1513 putative heavy-metal ion transporter
YP_002276583.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: gdi:GDI1514 putative resistence protein
YP_002276584.1	PFAM: outer membrane efflux protein; KEGG: gdi:GDI1515 putative type I secretion outer membrane protein, TolC
YP_002276585.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_002276586.1	KEGG: gdi:GDI1518 hypothetical protein
YP_002276587.1	KEGG: gdi:GDI1519 hypothetical protein
YP_002276588.1	KEGG: gdi:GDI1520 hypothetical protein
YP_002276589.1	KEGG: gdi:GDI1522 hypothetical protein
YP_002276590.1	TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: gdi:GDI1523 putative protease protein
YP_002276591.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI1525 putative hexuronate transporter
YP_002276592.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI1526 putative L-threonine 3-dehydrogenase
YP_002276593.1	PFAM: Aldehyde Dehydrogenase; KEGG: gdi:GDI1528 putative aldehyde dehydrogenase
YP_002276594.1	PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: gdi:GDI1529 putative alcohol dehydrogenase
YP_002276595.1	PFAM: coenzyme A transferase; KEGG: gdi:GDI1530 putative acyl-CoA transferase
YP_002276596.1	PFAM: transposase mutator type; KEGG: gdi:GDI2780 putative transposase
YP_002276597.1	PFAM: regulatory protein TetR; KEGG: gdi:GDI0156 transcriptional regulator, TetR family
YP_002276598.1	KEGG: gdi:GDI0158 hypothetical protein
YP_002276599.1	TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI0159 dehydrogenase (zinc-binding alcohol dehydrogenase)
YP_002276600.1	KEGG: gdi:GDI0160 hypothetical protein
YP_002276601.1	KEGG: gdi:GDI0161 hypothetical protein
YP_002276602.1	TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: gdi:GDI0162 putative GTP-binding protein
YP_002276603.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: gdi:GDI0163 putative signalling protein, GGDEF family
YP_002276604.1	KEGG: gdi:GDI0164 hypothetical protein
YP_002276605.1	TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gdi:GDI0165 putative siroheme synthase
YP_002276606.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: gdi:GDI0166 putative molybdopterin-guanine dinucleotide biosynthesis protein B
YP_002276607.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: gdi:GDI0167 putative molybdopterin-guanine dinucleotide biosynthesis protein A
YP_002276608.1	TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: gdi:GDI0168 putative DNA binding protein
YP_002276609.1	TIGRFAM: DNA ligase D; DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, polymerase domain protein; DNA polymerase LigD, ligase domain protein; PFAM: DNA primase small subunit; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: gdi:GDI0169 putative DNA ligase-like protein
YP_002276610.1	TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: gdi:GDI0170 putative DNA binding protein
YP_002276611.1	KEGG: bta:529621 proline rich 12
YP_002276612.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: gdi:GDI0172 pyruvate decarboxylase
YP_002276613.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI0173 putative transcriptional regulator, LysR family
YP_002276614.1	PFAM: protein of unknown function DUF403; KEGG: gdi:GDI0174 hypothetical protein
YP_002276615.1	PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: gdi:GDI0175 hypothetical protein
YP_002276616.1	PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: gdi:GDI0176 putative transglutaminase-like protein
YP_002276617.1	KEGG: gdi:GDI0177 hypothetical protein
YP_002276618.1	PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: gdi:GDI0178 hypothetical protein
YP_002276619.1	PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: gdi:GDI0179 putative transglutaminase-like protein
YP_002276620.1	KEGG: gdi:GDI0180 hypothetical protein
YP_002276621.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
YP_002276622.1	PFAM: protein of unknown function DUF343; KEGG: gdi:GDI0182 hypothetical protein
YP_002276623.1	PFAM: peptidase S16 lon domain protein; KEGG: gdi:GDI0183 putative ATP-dependent protease
YP_002276624.1	PFAM: Thioredoxin domain; KEGG: gdi:GDI0184 thioredoxin protein
YP_002276625.1	PFAM: helix-turn-helix HxlR type; KEGG: gdi:GDI0185 putative transcriptional regulator
YP_002276626.1	KEGG: gdi:GDI0186 zinc-type alcohol dehydrogenase-like protein; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein
YP_002276627.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI0187 putative transcriptional regulator LysR
YP_002276628.1	PFAM: protein of unknown function DUF1445; KEGG: gdi:GDI0188 hypothetical protein
YP_002276629.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI0189 putative MFS permease
YP_002276630.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI0191 putative TonB-dependent receptor
YP_002276631.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: gdi:GDI0192 putative sugar transporter
YP_002276632.1	PFAM: Dimethylmenaquinone methyltransferase; KEGG: gdi:GDI0193 putative demethylmenaquinone methyltransferase protein
YP_002276633.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI0194 putative transcriptional regulator, family LysR
YP_002276634.1	KEGG: gdi:GDI0195 hypothetical protein
YP_002276635.1	PFAM: Amidase; KEGG: gdi:GDI0196 putative glutamyl-tRNA(Gln) amidotransferase subunit A
YP_002276636.1	PFAM: Hydantoinase B/oxoprolinase; KEGG: gdi:GDI0197 putative 5-oxoprolinase (ATP-hydrolysing)
YP_002276637.1	PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: gdi:GDI0198 putative 5-oxoprolinase (ATP-hydrolysing)
YP_002276638.1	KEGG: gdi:GDI0199 hypothetical protein
YP_002276639.1	KEGG: gdi:GDI0200 hypothetical protein
YP_002276640.1	KEGG: gdi:GDI0201 putative biotin carboxylase (acetyl-CoA carboxylase subunit A); TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein
YP_002276641.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: gdi:GDI0202 putative biotin carboxyl carrier protein of acetyl-CoA carboxylase
YP_002276642.1	PFAM: LamB/YcsF family protein; KEGG: gdi:GDI0203 putative regulator protein
YP_002276643.1	TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: gdi:GDI0204 putative allophanate hydrolase subunit 2
YP_002276644.1	PFAM: Allophanate hydrolase subunit 1; KEGG: gdi:GDI0205 putative allophanate hydrolase subunit 1
YP_002276645.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI0206 putative glucarate transporter
YP_002276646.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI0207 putative TonB-dependent receptor
YP_002276647.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI0208 putative transcriptional regulator, LysR family
YP_002276648.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide
YP_002276649.1	KEGG: gdi:GDI0210 hypothetical protein
YP_002276650.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: gdi:GDI0211 putative D-3-phosphoglycerate dehydrogenase
YP_002276651.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gdi:GDI0212 putative glyoxalase
YP_002276652.1	PFAM: Choloylglycine hydrolase; KEGG: gdi:GDI0213 choloylglycine hydrolase
YP_002276653.1	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: gdi:GDI0214 putative NAD(P)H dehydrogenase (quinone)
YP_002276654.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI0215 putative transcriptional regulator, LysR family
YP_002276655.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI0216 putative transcriptional regulator, LysR family
YP_002276656.1	KEGG: gdi:GDI0217 putative 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA
YP_002276657.1	KEGG: gdi:GDI0218 hypothetical protein
YP_002276658.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: gdi:GDI0219 hypothetical protein
YP_002276659.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI0220 putative transcriptional regulator, LysR family
YP_002276660.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI0221 putative 3-oxoacyl-[acyl-carrier-protein] reductase
YP_002276661.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI0222 putative integrase
YP_002276662.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: gdi:GDI0223 putative NADP oxidoreductase coenzyme
YP_002276663.1	PFAM: Na+/H+ antiporter NhaA; KEGG: gdi:GDI0224 putative Na(+)/H(+)) antiporter 1
YP_002276664.1	KEGG: gdi:GDI0225 hypothetical protein
YP_002276665.1	KEGG: gdi:GDI0226 hypothetical protein
YP_002276666.1	PFAM: Dopa 45-dioxygenase; KEGG: gdi:GDI0228 hypothetical protein
YP_002276667.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: gdi:GDI0229 putative NADP oxidoreductase coenzyme
YP_002276668.1	PFAM: regulatory protein TetR; KEGG: gdi:GDI0230 putative transcriptional regulator
YP_002276669.1	PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: gdi:GDI0231 putative 3-oxoacyl-[acyl-carrier-protein] reductase
YP_002276670.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: gdi:GDI0232 flavin oxidoreductase
YP_002276671.1	KEGG: gdi:GDI0233 hypothetical protein
YP_002276672.1	PFAM: response regulator receiver; KEGG: gdi:GDI0234 putative response regulator
YP_002276673.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI0235 putative multidrug resistance protein
YP_002276674.1	PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI0236 putative secretion protein, HlyD-family
YP_002276675.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI0237 putative outer membrane protein
YP_002276676.1	KEGG: gdi:GDI0238 hypothetical protein
YP_002276677.1	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase
YP_002276678.1	KEGG: gdi:GDI0242 hypothetical protein
YP_002276679.1	KEGG: rno:499749 similar to RIKEN cDNA C430004E15
YP_002276680.1	KEGG: gdi:GDI0244 hypothetical protein
YP_002276681.1	PFAM: extracellular solute-binding protein family 5; KEGG: gdi:GDI0247 putative ABC-type transporter, substrate binding protein
YP_002276682.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI0248 putative inner membrane ABC transporter permease protein
YP_002276683.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI0249 putative dipeptide transport system permease protein
YP_002276684.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI0250 putative ABC transporter ATP-binding protein
YP_002276685.1	PFAM: Luciferase-like monooxygenase; KEGG: gdi:GDI0251 alkanal monooxygenase
YP_002276686.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: gdi:GDI0252 putative carboxymuconolactone decarboxylase
YP_002276687.1	KEGG: gdi:GDI0253 hypothetical protein
YP_002276688.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI0254 putative TonB-dependent receptor
YP_002276689.1	KEGG: gdi:GDI0255 hypothetical protein
YP_002276690.1	PFAM: response regulator receiver; KEGG: gdi:GDI0256 putative two-component response regulator
YP_002276691.1	PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gdi:GDI0257 putative sensor histidine kinase
YP_002276692.1	KEGG: gdi:GDI2722 putative transposase
YP_002276693.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: gdi:GDI0259 putative NAD dependent epimerase
YP_002276694.1	PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI0260 putative NADPH quinone oxidoreductase protein
YP_002276695.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI0261 3-oxoacyl-[acyl-carrier-protein] reductase
YP_002276696.1	in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane
YP_002276697.1	with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase
YP_002276698.1	TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: gdi:GDI0264 putative PTS-dependent dihydroxyacetone kinase
YP_002276699.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; PEP-utilizing protein; PTS system fructose subfamily IIA component; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: gdi:GDI0265 phosphoenolpyruvate-protein phosphotransferase PtsP
YP_002276700.1	TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: gdi:GDI0266 putative glycerol kinase
YP_002276701.1	TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: gdi:GDI0267 putative glycerol uptake facilitator protein
YP_002276702.1	KEGG: gdi:GDI0268 hypothetical protein
YP_002276703.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI0269 putative transcriptional regulator, LysR family
YP_002276704.1	PFAM: methylamine dehydrogenase heavy subunit; KEGG: gdi:GDI0271 methylamine dehydrogenase heavy chain precursor
YP_002276705.1	KEGG: gdi:GDI0272 putative methylamine utilization protein MauD
YP_002276706.1	PFAM: methylamine dehydrogenase light chain domain protein; KEGG: gdi:GDI0273 putative methylamine dehydrogenase light chain precursor
YP_002276707.1	KEGG: gdi:GDI0274 hypothetical protein
YP_002276708.1	KEGG: gdi:GDI0275 putative methylamine utilization protein MauE
YP_002276709.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: gdi:GDI0276 putative methylamine utilization protein
YP_002276710.1	TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: gdi:GDI0277 putative 4-aminobutyrate aminotransferase
YP_002276711.1	PFAM: EAL domain protein; KEGG: gdi:GDI0278 hypothetical protein
YP_002276712.1	TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: gdi:GDI0280 putative Na(+)/H(+)) exchanger
YP_002276713.1	KEGG: gdi:GDI0281 hypothetical protein
YP_002276714.1	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
YP_002276715.1	PFAM: Ankyrin; KEGG: gdi:GDI0283 hypothetical protein
YP_002276716.1	KEGG: gox:GOX1702 putative outer membrane protein
YP_002276717.1	TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: gdi:GDI0285 transketolase
YP_002276718.1	catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; catalyzes isomerization of glucose 6-phosphate and fructose 6-phosphate
YP_002276719.1	similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate
YP_002276720.1	KEGG: gdi:GDI0288 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase
YP_002276721.1	TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: gdi:GDI0289 phosphatase
YP_002276722.1	TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: gdi:GDI0290 phosphatase
YP_002276723.1	TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: gdi:GDI0291 6-phosphogluconolactonase
YP_002276724.1	KEGG: gdi:GDI0292 ribose-5-phosphate isomerase A; TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase
YP_002276725.1	KEGG: gdi:GDI0293 putative shikimate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase
YP_002276726.1	KEGG: gdi:GDI0294 hypothetical protein
YP_002276727.1	KEGG: gdi:GDI3859 putative transposase
YP_002276728.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: gdi:GDI0299 putative signalling protein, GGDEF family
YP_002276729.1	KEGG: gdi:GDI0300 hypothetical protein
YP_002276730.1	KEGG: gdi:GDI3803 putative transposase
YP_002276731.1	KEGG: gox:GOX1548 hypothetical protein
YP_002276732.1	PFAM: Ethanolamine ammonia-lyase light chain; KEGG: gdi:GDI0306 putative ethanolamine ammonia-lyase light chain
YP_002276733.1	PFAM: PilT protein domain protein; KEGG: gdi:GDI0307 hypothetical protein
YP_002276734.1	KEGG: gdi:GDI0308 hypothetical protein
YP_002276735.1	PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: gdi:GDI0309 putative L-lactate dehydrogenase
YP_002276736.1	PFAM: Ethanolamine ammonia lyase large subunit; KEGG: gdi:GDI0310 putative ethanolamine ammonia-lyase heavy chain
YP_002276737.1	PFAM: Aldehyde Dehydrogenase; KEGG: gdi:GDI0311 putative aldehyde dehydrogenase
YP_002276738.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gdi:GDI0312 putative NADH dehydrogenase
YP_002276739.1	PFAM: regulatory protein TetR; KEGG: gdi:GDI0313 putative transcriptional regulator, TetR family
YP_002276740.1	PFAM: band 7 protein; KEGG: gdi:GDI0316 hypothetical protein
YP_002276741.1	KEGG: gdi:GDI0318 hypothetical protein
YP_002276742.1	PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: gdi:GDI0319 putative transcriptional regulator, LacI family
YP_002276743.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gdi:GDI0320 putative enoyl-CoA hydratase
YP_002276744.1	PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: gdi:GDI0321 putative GMC oxidoreductase
YP_002276745.1	KEGG: gdi:GDI0322 hypothetical protein
YP_002276746.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gdi:GDI0323 putative glyoxalase
YP_002276747.1	KEGG: gdi:GDI0324 hypothetical protein
YP_002276748.1	TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: Pyrrolo-quinoline quinone; KEGG: gdi:GDI0325 quinoprotein glucose dehydrogenase
YP_002276749.1	KEGG: gdi:GDI0326 hypothetical protein
YP_002276750.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: gdi:GDI0327 putative magnesium-transporting ATPase
YP_002276751.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI0328 putative TonB-dependent receptor
YP_002276752.1	TIGRFAM: prevent-host-death family protein; KEGG: gdi:GDI0329 hypothetical protein
YP_002276753.1	PFAM: PilT protein domain protein; KEGG: gdi:GDI0330 hypothetical protein
YP_002276754.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gdi:GDI0333 putative glyoxalase
YP_002276755.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI0334 putative major facilitator superfamily transporter
YP_002276756.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3822 putative transposase
YP_002276757.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI0336 putative major facilitator superfamily transporter
YP_002276758.1	PFAM: helix-turn-helix domain protein; KEGG: gdi:GDI0337 hypothetical protein
YP_002276759.1	PFAM: fatty acid desaturase; KEGG: gdi:GDI0338 putative fatty acid desaturase
YP_002276760.1	KEGG: gdi:GDI0339 hypothetical protein
YP_002276761.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: gdi:GDI0340 NADPH dehydrogenase
YP_002276762.1	PFAM: alanine dehydrogenase/PNT domain protein; KEGG: gdi:GDI0341 putative NAD(P) transhydrogenase subunit alpha part 1
YP_002276763.1	KEGG: gdi:GDI0342 putative NAD(P) transhydrogenase subunit alpha part 2
YP_002276764.1	PFAM: NAD(P) transhydrogenase beta subunit; KEGG: gdi:GDI0343 putative NAD(P) transhydrogenase subunit beta
YP_002276765.1	PFAM: Aldehyde Dehydrogenase; KEGG: gdi:GDI0345 succinate-semialdehyde dehydrogenase
YP_002276766.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: gdi:GDI0346 putative citrate-proton symporter
YP_002276767.1	PFAM: regulatory protein MarR; KEGG: gdi:GDI0347 putative transcriptional regulator, family MarR
YP_002276768.1	PFAM: isochorismatase hydrolase; KEGG: gdi:GDI0348 isochorismatase hydrolase
YP_002276769.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI0349 putative drug resistance transporter
YP_002276770.1	PFAM: regulatory protein LacI; KEGG: gdi:GDI0350 putative transcriptional regulator protein, family LacI
YP_002276771.1	PFAM: Phytanoyl-CoA dioxygenase; KEGG: gdi:GDI0351 hypothetical protein
YP_002276772.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI0352 putative short-chain dehydrogenase/reductase
YP_002276773.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: gdi:GDI0353 putative oxidoreductase protein
YP_002276774.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: gdi:GDI0354 putative periplasmic binding proteins
YP_002276775.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI0355 putative ABC transporter ATP-binding protein
YP_002276776.1	PFAM: inner-membrane translocator; KEGG: gdi:GDI0358 putative ribose transport system permease protein
YP_002276777.1	PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: gdi:GDI0359 putative sugar isomerase
YP_002276778.1	PFAM: PfkB domain protein; KEGG: gdi:GDI0361 putative myo-inositol catabolism, sugar kinase protein
YP_002276779.1	PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; Xylose isomerase domain protein TIM barrel; KEGG: gdi:GDI0362 putative acetolactate synthase large subunit
YP_002276780.1	PFAM: Myo-inositol catabolism IolB domain protein; KEGG: gdi:GDI0364 putative myo-inositol catabolism protein
YP_002276781.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: gdi:GDI0365 putative methylmalonate-semialdehyde dehydrogenase
YP_002276782.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: gdi:GDI0366 putative inositol 2-dehydrogenase
YP_002276783.1	KEGG: gdi:GDI0367 hypothetical protein
YP_002276784.1	PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: gdi:GDI1545 transposase
YP_002276785.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI3699 putative transposase
YP_002276786.1	KEGG: gdi:GDI0370 hypothetical protein
YP_002276787.1	PFAM: plasmid maintenance system killer; KEGG: gdi:GDI0371 putative plasmid maintenance system killer
YP_002276788.1	TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: gdi:GDI0372 putative plasmid maintenance system antidote protein
YP_002276789.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI2757 integrase
YP_002276790.1	KEGG: eca:ECA3132 putative lipoprotein
YP_002276791.1	KEGG: gdi:GDI0382 hypothetical protein
YP_002276792.1	PFAM: transposase IS3/IS911 family protein; KEGG: gdi:GDI2859 putative transposase
YP_002276793.1	KEGG: gdi:GDI1051 putative transposase
YP_002276794.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI0980 putative integrase
YP_002276795.1	PFAM: transposase mutator type; KEGG: swi:Swit_5112 transposase, mutator type
YP_002276796.1	PFAM: integrase family protein; KEGG: gdi:GDI1030 hypothetical protein
YP_002276799.1	KEGG: gdi:GDI3799 hypothetical protein
YP_002276800.1	KEGG: gdi:GDI3559 hypothetical protein
YP_002276801.1	KEGG: gdi:GDI3689 hypothetical protein
YP_002276802.1	PFAM: Tail Collar domain protein; KEGG: gdi:GDI3688 hypothetical protein
YP_002276803.1	KEGG: gdi:GDI3586 hypothetical protein
YP_002276804.1	KEGG: gdi:GDI0370 hypothetical protein
YP_002276806.1	KEGG: gdi:GDI3608 hypothetical protein
YP_002276807.1	KEGG: gdi:GDI3605 hypothetical protein
YP_002276808.1	KEGG: gdi:GDI3685 hypothetical protein
YP_002276809.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gdi:GDI3684 hypothetical protein
YP_002276810.1	KEGG: gdi:GDI3683 hypothetical protein
YP_002276811.1	KEGG: gdi:GDI3681 hypothetical protein
YP_002276812.1	KEGG: gdi:GDI3679 hypothetical protein
YP_002276813.1	KEGG: gdi:GDI3678 hypothetical protein
YP_002276814.1	KEGG: gdi:GDI3677 hypothetical protein
YP_002276815.1	KEGG: gdi:GDI3676 hypothetical protein
YP_002276816.1	KEGG: gdi:GDI3675 hypothetical protein
YP_002276819.1	KEGG: gdi:GDI3673 hypothetical protein
YP_002276820.1	KEGG: gdi:GDI3672 hypothetical protein
YP_002276821.1	KEGG: gdi:GDI3671 hypothetical protein
YP_002276822.1	KEGG: gdi:GDI3671 hypothetical protein
YP_002276823.1	PFAM: chaperonin Cpn10; KEGG: gdi:GDI3670 hypothetical protein
YP_002276824.1	KEGG: gdi:GDI3670 hypothetical protein
YP_002276825.1	KEGG: gdi:GDI3670 hypothetical protein
YP_002276827.1	KEGG: gdi:GDI3669 hypothetical protein
YP_002276828.1	KEGG: gdi:GDI1281 hypothetical protein
YP_002276831.1	KEGG: gdi:GDI3668 hypothetical protein
YP_002276832.1	PFAM: Terminase small subunit; KEGG: dac:Daci_4100 terminase small subunit
YP_002276834.1	PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein; KEGG: gdi:GDI3661 hypothetical protein
YP_002276835.1	PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: syf:Synpcc7942_0725 DEAD/DEAH box helicase-like
YP_002276836.1	KEGG: ypy:YPK_1205 hypothetical protein
YP_002276837.1	KEGG: eba:ebB1 hypothetical protein
YP_002276838.1	KEGG: gox:GOX2468 hypothetical protein
YP_002276839.1	KEGG: gdi:GDI3660 hypothetical protein
YP_002276841.1	PFAM: helix-turn-helix domain protein; KEGG: gox:GOX1207 probable transcriptional regulator
YP_002276842.1	KEGG: mag:amb0342 hypothetical protein
YP_002276844.1	KEGG: psb:Psyr_1608 ice-nucleation proteins octamer repeat
YP_002276845.1	PFAM: ice-nucleation protein octamer repeat; S-antigen family protein; KEGG: ddi:DDBDRAFT_0188625 hypothetical protein
YP_002276846.1	KEGG: gox:GOX2479 hypothetical protein
YP_002276849.1	KEGG: rsh:Rsph17029_0667 hypothetical protein
YP_002276850.1	KEGG: oan:Oant_0213 hypothetical protein
YP_002276854.1	PFAM: Gp37Gp68 family protein; KEGG: pna:Pnap_3331 phage Gp37Gp68 family protein
YP_002276855.1	KEGG: gdi:GDI3577 hypothetical protein
YP_002276859.1	KEGG: pde:Pden_3608 hypothetical protein
YP_002276860.1	PFAM: integrase family protein; KEGG: mag:amb1491 integrase
YP_002276861.1	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: gdi:GDI1031 putative single-stranded-DNA-specific exonuclease RecJ
YP_002276862.1	type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese
YP_002276863.1	catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine
YP_002276864.1	PFAM: aminotransferase class I and II; KEGG: gdi:GDI1034 aminotransferase protein
YP_002276865.1	KEGG: gdi:GDI1035 hypothetical protein
YP_002276866.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
YP_002276867.1	KEGG: gdi:GDI1037 hypothetical protein
YP_002276868.1	KEGG: gdi:GDI1038 hypothetical protein
YP_002276869.1	KEGG: gdi:GDI1039 hypothetical protein
YP_002276870.1	KEGG: gdi:GDI1040 hypothetical protein
YP_002276871.1	PFAM: protein of unknown function DUF885; KEGG: gdi:GDI1041 hypothetical protein
YP_002276872.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI1043 putative integrase
YP_002276873.1	PFAM: transposase IS3/IS911 family protein; KEGG: gdi:GDI0409 putative transposase
YP_002276874.1	KEGG: gdi:GDI1046 hypothetical protein
YP_002276875.1	PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: gdi:GDI1047 putative allantoin permease
YP_002276876.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI3631 putative transcriptional regulator LysR
YP_002276877.1	PFAM: Amidohydrolase 3; KEGG: gdi:GDI3632 putative amidohydrolase
YP_002276878.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI3633 putative TonB-dependent receptor
YP_002276879.1	KEGG: gdi:GDI3634 hypothetical protein
YP_002276880.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: gdi:GDI3635 putative sulfate transporter
YP_002276881.1	PFAM: CBS domain containing protein; transport-associated; KEGG: gdi:GDI3636 hypothetical protein
YP_002276882.1	KEGG: gdi:GDI3637 hypothetical protein
YP_002276883.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gdi:GDI3639 putative acetyltransferase
YP_002276884.1	KEGG: gdi:GDI3640 putative signalling protein, GGDEF family; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_002276885.1	KEGG: gdi:GDI3641 hypothetical protein
YP_002276886.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gdi:GDI3642 putative acetyltransferase
YP_002276887.1	PFAM: Carbohydrate-selective porin OprB; KEGG: gdi:GDI3643 putative carbohydrate-selective porin
YP_002276888.1	KEGG: gdi:GDI3644 hypothetical protein
YP_002276889.1	TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: gdi:GDI3645 hypothetical protein
YP_002276890.1	KEGG: gdi:GDI3646 hypothetical protein
YP_002276891.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: gdi:GDI3647 hypothetical protein
YP_002276892.1	PFAM: regulatory protein ArsR; KEGG: gdi:GDI3648 putative transcriptional regulator, ArsR family
YP_002276893.1	TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: gdi:GDI3649 putative arsenate reductase
YP_002276894.1	PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: gdi:GDI3650 arsenical pump membrane protein
YP_002276895.1	PFAM: cytochrome B561; KEGG: gdi:GDI3651 putative cytochrome b561
YP_002276896.1	KEGG: gdi:GDI3652 putative lipoprotein
YP_002276897.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: gdi:GDI3653 putative hydrolase protein
YP_002276898.1	PFAM: protein of unknown function DUF1501; KEGG: gdi:GDI3654 hypothetical protein
YP_002276899.1	PFAM: Class I peptide chain release factor; KEGG: gdi:GDI3656 putative peptidyl-tRNA hydrolase
YP_002276900.1	KEGG: gdi:GDI3657 hypothetical protein
YP_002276901.1	PFAM: peptidase S24 and S26 domain protein; KEGG: gdi:GDI3658 putative protease
YP_002276902.1	KEGG: gdi:GDI3659 hypothetical protein
YP_002276903.1	KEGG: gdi:GDI3660 hypothetical protein
YP_002276904.1	KEGG: gdi:GDI3661 hypothetical protein
YP_002276905.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: gdi:GDI3665 putative signalling protein, GGDEF family
YP_002276906.1	KEGG: gdi:GDI3666 hypothetical protein
YP_002276907.1	KEGG: dac:Daci_4100 terminase small subunit
YP_002276908.1	KEGG: gdi:GDI3668 hypothetical protein
YP_002276909.1	KEGG: gdi:GDI3669 hypothetical protein
YP_002276911.1	KEGG: gdi:GDI3670 hypothetical protein
YP_002276913.1	PFAM: chaperonin Cpn10; KEGG: gdi:GDI3670 hypothetical protein
YP_002276914.1	KEGG: gdi:GDI3671 hypothetical protein
YP_002276915.1	KEGG: gdi:GDI3671 hypothetical protein
YP_002276916.1	KEGG: gdi:GDI3672 hypothetical protein
YP_002276917.1	KEGG: gdi:GDI3673 hypothetical protein
YP_002276918.1	KEGG: gdi:GDI3674 hypothetical protein
YP_002276919.1	KEGG: gdi:GDI3675 hypothetical protein
YP_002276920.1	KEGG: gdi:GDI3676 hypothetical protein
YP_002276921.1	KEGG: gdi:GDI3677 hypothetical protein
YP_002276922.1	KEGG: gdi:GDI3678 hypothetical protein
YP_002276923.1	KEGG: gdi:GDI3679 hypothetical protein
YP_002276924.1	KEGG: gdi:GDI3680 hypothetical protein
YP_002276925.1	KEGG: gdi:GDI3681 hypothetical protein
YP_002276926.1	KEGG: gdi:GDI3682 hypothetical protein
YP_002276927.1	KEGG: gdi:GDI3683 hypothetical protein
YP_002276928.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gdi:GDI3684 hypothetical protein
YP_002276929.1	KEGG: gdi:GDI3685 hypothetical protein
YP_002276930.1	KEGG: gdi:GDI3686 hypothetical protein
YP_002276931.1	PFAM: Tail Collar domain protein; KEGG: gdi:GDI3688 hypothetical protein
YP_002276932.1	KEGG: gdi:GDI3689 hypothetical protein
YP_002276933.1	KEGG: gdi:GDI3690 hypothetical protein
YP_002276934.1	KEGG: gdi:GDI3556 hypothetical protein
YP_002276935.1	KEGG: gdi:GDI3692 hypothetical protein
YP_002276936.1	KEGG: gdi:GDI3693 hypothetical protein
YP_002276937.1	TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: gdi:GDI3694 bacterioferritin
YP_002276938.1	KEGG: gox:GOX0442 hypothetical protein
YP_002276939.1	KEGG: gdi:GDI3697 hypothetical protein
YP_002276940.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: gdi:GDI3698 putative ATP-dependent RNA helicase
YP_002276941.1	PFAM: protein of unknown function DUF262; KEGG: acb:A1S_3467 hypothetical protein
YP_002276942.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3822 putative transposase
YP_002276943.1	PFAM: metallophosphoesterase; KEGG: gdi:GDI3706 putative phosphoesterase
YP_002276944.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-4 domain protein; KEGG: gdi:GDI3707 putative signalling protein, GGDEF family
YP_002276945.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3822 putative transposase
YP_002276946.1	KEGG: gdi:GDI3710 hypothetical protein
YP_002276947.1	PFAM: PepSY-associated TM helix domain protein; KEGG: gdi:GDI3711 hypothetical protein
YP_002276948.1	KEGG: gdi:GDI3712 hypothetical protein
YP_002276949.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI3713 putative TonB-dependent receptor
YP_002276950.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI3715 TonB-dependent receptor
YP_002276951.1	KEGG: gdi:GDI3716 hypothetical protein
YP_002276952.1	KEGG: gdi:GDI3717 hypothetical protein
YP_002276953.1	KEGG: gdi:GDI3803 putative transposase
YP_002276954.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; outer membrane efflux protein; KEGG: gdi:GDI3719 putative outer membrane protein
YP_002276955.1	PFAM: protein of unknown function DUF214; KEGG: gdi:GDI3720 putative transmembrane transport protein
YP_002276956.1	PFAM: protein of unknown function DUF214; KEGG: gdi:GDI3721 putative transmembrane transport protein
YP_002276957.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI3722 putative ABC transport system, ATP-binding protein
YP_002276958.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sde:Sde_0328 ABC transporter permease
YP_002276959.1	PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: gdi:GDI3724 putative two-component system, response regulator
YP_002276960.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gdi:GDI3725 two-component system, sensor histidine kinase
YP_002276961.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI3726 putative transport ATP-binding protein
YP_002276962.1	PFAM: inner-membrane translocator; KEGG: gdi:GDI3728 putative transport system permease protein
YP_002276963.1	PFAM: inner-membrane translocator; KEGG: gdi:GDI3729 putative transport system permease protein
YP_002276964.1	KEGG: gdi:GDI3730 hypothetical protein
YP_002276965.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: gdi:GDI3731 putative antibiotic biosynthesis monooxygenase
YP_002276966.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: gdi:GDI3732 putative oxidoreductase
YP_002276967.1	KEGG: gdi:GDI3733 hypothetical protein
YP_002276968.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI3734 putative short-chain dehydrogenases/reductases family
YP_002276969.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: gdi:GDI3735 putative transcriptional regulator LacI family
YP_002276970.1	KEGG: gdi:GDI3736 putative invertase; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32
YP_002276971.1	KEGG: lch:Lcho_1314 hypothetical protein
YP_002276972.1	KEGG: pme:NATL1_21501 NAD-dependent DNA ligase
YP_002276974.1	PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: gdi:GDI3741 putative aminotransferase
YP_002276975.1	KEGG: gdi:GDI3742 hypothetical protein
YP_002276976.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: gdi:GDI3743 putative nitrilase
YP_002276977.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gdi:GDI3744 hypothetical protein
YP_002276978.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gdi:GDI3745 hypothetical protein
YP_002276979.1	PFAM: AIR synthase related protein domain protein; KEGG: gdi:GDI3746 hypothetical protein
YP_002276980.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI3747 putative glycosyltransferase
YP_002276981.1	KEGG: gdi:GDI3748 hypothetical protein
YP_002276982.1	KEGG: gdi:GDI3749 hypothetical protein
YP_002276983.1	PFAM: AMP-dependent synthetase and ligase; KEGG: gdi:GDI3750 putative propionate--CoA ligase
YP_002276984.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gdi:GDI3751 putative glyoxalase/bleomycin resistance protein/dioxygenase
YP_002276986.1	PFAM: N-acylglucosamine 2-epimerase; KEGG: gdi:GDI3752 putative sugar isomerase
YP_002276987.1	KEGG: gdi:GDI3755 hypothetical protein
YP_002276988.1	PFAM: Extensin family protein; KEGG: gdi:GDI3756 hypothetical protein
YP_002276989.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: gdi:GDI3757 putative glycerophosphoryl diester phosphodiesterase
YP_002276990.1	PFAM: TonB-dependent receptor plug; KEGG: gdi:GDI3758 putative TonB-dependent receptor
YP_002276991.1	PFAM: regulatory protein MarR; KEGG: gdi:GDI3759 putative transcriptional regulator MarR
YP_002276992.1	PFAM: Fusaric acid resistance protein conserved region; KEGG: gdi:GDI3760 hypothetical protein
YP_002276993.1	PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI1604 putative secretion protein, HlyD-family
YP_002276994.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI3762 putative outer membrane protein OprM
YP_002276995.1	PFAM: Chloride channel core; KEGG: gdi:GDI3763 putative chloride channel protein
YP_002276996.1	KEGG: gdi:GDI3764 putative L-sorbosone dehydrogenase
YP_002276997.1	KEGG: gdi:GDI3765 hypothetical protein
YP_002276998.1	KEGG: gdi:GDI3766 hypothetical protein
YP_002277000.1	KEGG: gdi:GDI3767 hypothetical protein
YP_002277001.1	SMART: DNA mismatch repair protein MutS domain protein; KEGG: gdi:GDI3768 putative DNA mismatch repair protein MutS
YP_002277002.1	SMART: DNA mismatch repair protein MutS domain protein; KEGG: gdi:GDI3769 putative DNA mismatch repair protein MutS
YP_002277003.1	PFAM: UspA domain protein; KEGG: gdi:GDI3771 hypothetical protein
YP_002277004.1	TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: gdi:GDI3772 putative chromosome condensation protein
YP_002277005.1	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: gdi:GDI3773 putative acyl carrier protein phosphodiesterase
YP_002277006.1	PFAM: helix-turn-helix HxlR type; KEGG: gdi:GDI3774 putative transcriptional regulator
YP_002277007.1	TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: gdi:GDI3776 putative cytosine-specifi methyltransferase DdeI
YP_002277008.1	PFAM: transposase IS3/IS911 family protein; KEGG: gdi:GDI2859 putative transposase
YP_002277009.1	PFAM: ATP-binding region ATPase domain protein; KEGG: gdi:GDI3778 hypothetical protein
YP_002277010.1	TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: gdi:GDI3779 putative repair endonuclease
YP_002277011.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3864 putative transposase
YP_002277012.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3822 putative transposase
YP_002277013.1	PFAM: Protein of unknown function DUF1810; KEGG: gdi:GDI3784 hypothetical protein
YP_002277014.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI3785 putative transcriptional regulator, LysR family
YP_002277015.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI3786 short-chain dehydrogenase
YP_002277016.1	PFAM: amino acid permease-associated region; KEGG: gdi:GDI3787 putative amino acid permease
YP_002277017.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
YP_002277018.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gdi:GDI3789 putative acetyltransferase
YP_002277019.1	PFAM: AsmA family protein; KEGG: gdi:GDI3790 putative outer membrane biogenesis protein
YP_002277020.1	PFAM: MscS Mechanosensitive ion channel; KEGG: gdi:GDI3791 putative mechanosensitive ion channel
YP_002277021.1	PFAM: ribonuclease BN; KEGG: gdi:GDI3792 putative ribonuclease
YP_002277022.1	KEGG: gdi:GDI3793 hypothetical protein
YP_002277023.1	PFAM: regulatory protein TetR; KEGG: gdi:GDI3795 putative transcriptional regulator, TetR family
YP_002277024.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI3796 putative outer membrane protein
YP_002277025.1	TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: gdi:GDI3797 putative DnaK suppressor protein
YP_002277026.1	KEGG: gdi:GDI3798 hypothetical protein
YP_002277028.1	PFAM: YcfA family protein; KEGG: gdi:GDI3800 hypothetical protein
YP_002277029.1	PFAM: protein of unknown function UPF0150; KEGG: gdi:GDI3801 hypothetical protein
YP_002277030.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI2705 putative integrase
YP_002277031.1	PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: gdi:GDI3806 putative transposase
YP_002277034.1	PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: gdi:GDI3810 putative cold shock protein
YP_002277035.1	KEGG: gdi:GDI3811 hypothetical protein
YP_002277036.1	KEGG: gdi:GDI3812 putative signalling protein, GGDEF family; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_002277037.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI3813 putative phosphate transport system permease protein PstC
YP_002277038.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI3814 putative phosphate transport system permease protein
YP_002277039.1	ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation
YP_002277040.1	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: gdi:GDI3816 phosphate transport system protein PhoU
YP_002277041.1	TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gdi:GDI3817 putative phosphate regulon transcriptional regulatory protein PhoB
YP_002277042.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gdi:GDI3818 putative phosphate regulon, two-component sensor histidine kinase, PhoR
YP_002277043.1	TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: gdi:GDI3819 phosphate-binding periplasmic protein precursor
YP_002277044.1	KEGG: gdi:GDI3823 hypothetical protein
YP_002277045.1	PFAM: phosphate transporter; KEGG: gdi:GDI3824 putative phosphate transporter
YP_002277046.1	TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: gdi:GDI3825 putative plasmid maintenance system antidote protein
YP_002277047.1	PFAM: plasmid maintenance system killer; KEGG: gdi:GDI3826 putative plasmid maintenance system killer
YP_002277048.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3863 putative transposase
YP_002277049.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI3828 putative ABC transporter
YP_002277050.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; extracellular solute-binding protein family 3; KEGG: gdi:GDI3829 putative transport protein
YP_002277051.1	PFAM: class II aldolase/adducin family protein; KEGG: gdi:GDI3830 putative aldolase protein
YP_002277052.1	PFAM: regulatory protein ArsR; KEGG: gdi:GDI3831 putative transcriptional regulator ArsR
YP_002277053.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: gdi:GDI3832 putative peroxiredoxin protein
YP_002277054.1	PFAM: beta-lactamase domain protein; KEGG: gdi:GDI3833 hypothetical protein
YP_002277055.1	PFAM: protein of unknown function DUF81; KEGG: gdi:GDI3834 hypothetical protein
YP_002277056.1	KEGG: gdi:GDI3835 hypothetical protein
YP_002277057.1	PFAM: CBS domain containing protein; KEGG: gdi:GDI3836 hypothetical protein
YP_002277058.1	PFAM: phosphoribosyltransferase; KEGG: gdi:GDI3837 hypothetical protein
YP_002277059.1	PFAM: Erythromycin esterase; KEGG: gdi:GDI3838 putative erythromycin esterase protein
YP_002277060.1	PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI3839 putative secretion protein, HlyD-family
YP_002277061.1	PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: pol:Bpro_3454 ABC-2
YP_002277062.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: gdi:GDI3842 putative signalling protein, GGDEF family
YP_002277063.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3864 putative transposase
YP_002277064.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3863 putative transposase
YP_002277065.1	KEGG: gdi:GDI3845 hypothetical protein
YP_002277066.1	PFAM: sodium:dicarboxylate symporter; KEGG: gdi:GDI3846 putative C4-dicarboxylate transport protein
YP_002277067.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_002277068.1	PFAM: acriflavin resistance protein; KEGG: gdi:GDI3849 putative multidrug resistance protein MdtB
YP_002277069.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI3850 secretion protein, HlyD-family
YP_002277070.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI3851 outer membrane protein
YP_002277071.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI3852 putative transcriptional regulator, LysR family
YP_002277072.1	PFAM: Glutathione S-transferase domain; KEGG: gdi:GDI3853 putative glutathione S-transferase
YP_002277073.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI3564 putative integrase protein
YP_002277074.1	KEGG: gdi:GDI3856 hypothetical protein
YP_002277075.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: gdi:GDI3857 cobyrinic acid a,c-diamide synthase
YP_002277076.1	KEGG: gdi:GDI3859 putative transposase
YP_002277077.1	PFAM: integrase family protein; KEGG: gdi:GDI3860 hypothetical protein
YP_002277078.1	PFAM: WGR domain protein; KEGG: dsh:Dshi_4085 WGR domain protein
YP_002277079.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3822 putative transposase
YP_002277080.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3863 putative transposase
YP_002277081.1	KEGG: gdi:GDI3803 putative transposase
YP_002277082.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3864 putative transposase
YP_002277083.1	KEGG: gdi:GDI2722 putative transposase
YP_002277087.1	KEGG: xom:XOO_0193 hypothetical protein
YP_002277089.1	KEGG: gdi:GDI3803 putative transposase
YP_002277090.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3822 putative transposase
YP_002277091.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI1096 putative integrase
YP_002277092.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI2757 integrase
YP_002277093.1	PFAM: Integrase catalytic region; KEGG: sty:HCM1.162c putative transposase
YP_002277094.1	PFAM: transposase mutator type; KEGG: gdi:GDI2780 putative transposase
YP_002277095.1	PFAM: fumarate lyase; KEGG: gdi:GDI3627 putative 3-carboxy-cis,cis-muconate cycloisomerase
YP_002277096.1	TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: gdi:GDI3623 putative peptide methionine sulfoxide reductase
YP_002277097.1	TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: gdi:GDI3622 putative peptide methionine sulfoxide reductase MsrB
YP_002277098.1	KEGG: gdi:GDI3621 hypothetical protein
YP_002277099.1	PFAM: oxidoreductase molybdopterin binding; KEGG: gdi:GDI3620 putative oxidoreductase protein
YP_002277100.1	TIGRFAM: pentapeptide MXKDX repeat protein; KEGG: gdi:GDI3619 hypothetical protein
YP_002277101.1	KEGG: gdi:GDI3618 hypothetical protein
YP_002277102.1	PFAM: Amidase; KEGG: gdi:GDI3617 putative glutamyl-tRNA(Gln) amidotransferase subunit A
YP_002277103.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: gdi:GDI3616 hypothetical protein
YP_002277104.1	KEGG: gdi:GDI3615 hypothetical protein
YP_002277105.1	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: gdi:GDI3614 putative 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB
YP_002277106.1	KEGG: gdi:GDI3551 hypothetical protein
YP_002277107.1	KEGG: gdi:GDI3550 hypothetical protein
YP_002277108.1	KEGG: gdi:GDI3549 hypothetical protein
YP_002277109.1	KEGG: gdi:GDI3548 hypothetical protein
YP_002277110.1	KEGG: gdi:GDI3547 hypothetical protein
YP_002277111.1	KEGG: gdi:GDI3546 hypothetical protein
YP_002277112.1	KEGG: gdi:GDI3545 hypothetical protein
YP_002277113.1	PFAM: SH3 type 3 domain protein; KEGG: gdi:GDI3544 hypothetical protein
YP_002277114.1	KEGG: gdi:GDI3543 hypothetical protein
YP_002277115.1	KEGG: gdi:GDI3542 hypothetical protein
YP_002277116.1	KEGG: gdi:GDI3541 hypothetical protein
YP_002277117.1	KEGG: gdi:GDI3540 hypothetical protein
YP_002277118.1	PFAM: integrase family protein; KEGG: bbt:BBta_7820 putative phage integrase
YP_002277119.1	PFAM: AIG2 family protein; KEGG: cps:CPS_2442 hypothetical protein
YP_002277120.1	KEGG: sbn:Sbal195_4550 hypothetical protein
YP_002277121.1	KEGG: rpt:Rpal_1141 hypothetical protein
YP_002277122.1	KEGG: cak:Caul_5180 hypothetical protein
YP_002277123.1	KEGG: bra:BRADO1249 hypothetical protein
YP_002277124.1	KEGG: rle:RL2188 hypothetical protein
YP_002277125.1	KEGG: nwi:Nwi_0260 hypothetical protein
YP_002277126.1	KEGG: rpd:RPD_2297 hypothetical protein
YP_002277127.1	KEGG: mes:Meso_0540 hypothetical protein
YP_002277128.1	KEGG: xau:Xaut_4026 hypothetical protein
YP_002277129.1	PFAM: ParB domain protein nuclease; KEGG: bja:blr1932 hypothetical protein
YP_002277130.1	KEGG: bja:blr8297 hypothetical protein
YP_002277131.1	KEGG: xau:Xaut_3030 hypothetical protein
YP_002277132.1	KEGG: bbt:BBta_7413 putative methylase/helicase
YP_002277133.1	KEGG: bja:bll0064 hypothetical protein
YP_002277134.1	KEGG: bja:bll0063 hypothetical protein
YP_002277135.1	KEGG: mab:MAB_2956 hypothetical protein
YP_002277136.1	KEGG: nar:Saro_0372 hypothetical protein
YP_002277137.1	KEGG: bja:blr1945 hypothetical protein
YP_002277138.1	PFAM: protein of unknown function DUF736; KEGG: xau:Xaut_0764 protein of unknown function DUF736
YP_002277139.1	PFAM: helix-turn-helix domain protein; KEGG: mlo:msl5762 transcriptional regulatory protein
YP_002277140.1	PFAM: helix-turn-helix domain protein; KEGG: oan:Oant_1848 transcriptional regulator, XRE family
YP_002277141.1	KEGG: bja:bsl0054 hypothetical protein
YP_002277142.1	KEGG: swi:Swit_3681 hypothetical protein
YP_002277143.1	KEGG: bja:bll0053 hypothetical protein
YP_002277144.1	KEGG: bja:bll0052 hypothetical protein
YP_002277145.1	KEGG: bja:bll0051 replication protein A
YP_002277146.1	PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bja:bll0050 putative partition protein
YP_002277147.1	KEGG: bja:bsl0049 hypothetical protein
YP_002277148.1	KEGG: bja:bll0048 hypothetical protein
YP_002277149.1	KEGG: bja:bll0047 conjugal transfer protein precursor
YP_002277150.1	PFAM: protein of unknown function DUF736; KEGG: bja:bll0046 hypothetical protein
YP_002277151.1	PFAM: Lytic transglycosylase catalytic; KEGG: bja:bll0045 probable transglycosylase
YP_002277152.1	PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: gdi:GDI1545 transposase
YP_002277153.1	KEGG: bja:bll0044 hypothetical protein
YP_002277154.1	PFAM: helix-turn-helix domain protein; KEGG: bja:bll4873 hypothetical protein
YP_002277155.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bcm:Bcenmc03_4093 alcohol dehydrogenase zinc-binding domain protein
YP_002277156.1	PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mlo:mlr2028 probable oxygenase
YP_002277157.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A2674 short chain dehydrogenase
YP_002277158.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bja:blr5548 transcriptional regulatory protein
YP_002277159.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B0662 short-chain dehydrogenase/reductase SDR
YP_002277160.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bac:BamMC406_4938 transcriptional regulator, AraC family
YP_002277161.1	PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: bid:Bind_2952 major facilitator superfamily MFS_1
YP_002277162.1	KEGG: bid:Bind_2951 hypothetical protein
YP_002277163.1	PFAM: isochorismatase hydrolase; KEGG: bid:Bind_2950 isochorismatase hydrolase
YP_002277164.1	PFAM: regulatory protein MarR; KEGG: bid:Bind_2949 transcriptional regulator, MarR family
YP_002277165.1	type IV secretion VirD4 coupling protein family
YP_002277166.1	KEGG: bja:bll0042 hypothetical protein
YP_002277167.1	PFAM: beta-lactamase; KEGG: bid:Bind_1435 beta-lactamase
YP_002277168.1	PFAM: alpha/beta hydrolase fold; KEGG: mms:mma_1873 carboxyl esterase, a/b hydrolase
YP_002277169.1	KEGG: xau:Xaut_0943 conserved hypothetical secreted protein
YP_002277170.1	KEGG: bid:Bind_0036 conserved hypothetical cytosolic protein
YP_002277171.1	TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; KEGG: bja:bll8288 conjugal transfer protein
YP_002277172.1	PFAM: Conjugal transfer protein TrbC; KEGG: bja:bll8287 probable conjugal transfer protein
YP_002277173.1	PFAM: type IV secretory pathway VirB3 family protein; KEGG: bja:bsl8286 probable conjugal transfer protein
YP_002277174.1	type IV secretion system VirB4 family
YP_002277175.1	TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: bja:bll8284 probable conjugal transfer protein
YP_002277176.1	KEGG: bja:bll8283 hypothetical protein
YP_002277177.1	type IV secretion VirB6 family
YP_002277178.1	PFAM: Conjugal transfer protein; KEGG: bja:bll8281 probable conjugal transfer protein
YP_002277179.1	TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: bja:bll8280 probable conjugal transfer protein
YP_002277180.1	PFAM: conjugation TrbI family protein; KEGG: bja:bll8279 probable conjugal transfer protein
YP_002277181.1	KEGG: pla:Plav_3551 hypothetical protein
YP_002277182.1	KEGG: gdi:GDI3859 putative transposase
YP_002277183.1	PFAM: monooxygenase FAD-binding; KEGG: sco:SCO7223 monooxygenase
YP_002277184.1	PFAM: lipolytic protein G-D-S-L family; KEGG: pae:PA3125 hypothetical protein
YP_002277185.1	PFAM: oxidoreductase domain protein; KEGG: bxe:Bxe_C0470 putative oxidoreductase
YP_002277186.1	PFAM: regulatory protein TetR; KEGG: sco:SCO7222 TetR-family transcriptional regulator
YP_002277187.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: ent:Ent638_2290 protein of unknown function DUF6, transmembrane
YP_002277188.1	PFAM: alpha/beta hydrolase fold; KEGG: bid:Bind_0276 alpha/beta hydrolase fold
YP_002277189.1	PFAM: regulatory protein TetR; KEGG: bid:Bind_0275 transcriptional regulator, TetR family
YP_002277190.1	PFAM: alpha/beta hydrolase fold; KEGG: gdi:GDI3539 putative alpha/beta hydrolase
YP_002277191.1	KEGG: gdi:GDI3538 hypothetical protein
YP_002277192.1	KEGG: gdi:GDI3537 putative DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2
YP_002277193.1	PFAM: electron transport protein SCO1/SenC; KEGG: gdi:GDI3536 electron transport protein SCO1/SenC
YP_002277194.1	PFAM: extracellular solute-binding protein family 5; KEGG: gdi:GDI3535 putative peptide bind protein
YP_002277195.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI3534 putative transport/binding protein
YP_002277196.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI3533 putative transport/binding protein
YP_002277197.1	KEGG: gdi:GDI3532 putative peptide ABC transport protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_002277198.1	KEGG: gdi:GDI3531 putative peptide ABC transport protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_002277199.1	KEGG: gdi:GDI3530 hypothetical protein
YP_002277200.1	KEGG: gdi:GDI3529 hypothetical protein
YP_002277201.1	PFAM: glycosyl transferase family 2; General secretory system II protein E domain protein; KEGG: gdi:GDI3528 putative glycosyltransferase
YP_002277202.1	KEGG: gdi:GDI3527 hypothetical protein
YP_002277203.1	KEGG: gdi:GDI3526 hypothetical protein
YP_002277204.1	KEGG: nve:NEMVE_v1g200105 predicted protein Pfam: MutS_III PROSITE: HIS_RICH LEU_RICH PRO_RICH SER_RICH THR_RICH VAL_RICH
YP_002277205.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI3524 putative short chain dehydrogenase
YP_002277206.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI3523 putative zinc-type alcohol dehydrogenase-like protein
YP_002277207.1	KEGG: gdi:GDI3522 hypothetical protein
YP_002277208.1	PFAM: protein of unknown function DUF892; KEGG: gdi:GDI3521 hypothetical protein
YP_002277209.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
YP_002277210.1	KEGG: gdi:GDI3519 putative exodeoxyribonuclease VII large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type
YP_002277211.1	KEGG: gdi:GDI3518 hypothetical protein
YP_002277212.1	KEGG: gdi:GDI3517 hypothetical protein
YP_002277213.1	KEGG: gdi:GDI3516 hypothetical protein
YP_002277214.1	PFAM: outer membrane chaperone Skp (OmpH); KEGG: gdi:GDI3515 putative outer membrane protein
YP_002277215.1	PFAM: Carbohydrate-selective porin OprB; KEGG: gdi:GDI3514 putative carbohydrate-selective porin
YP_002277216.1	KEGG: gdi:GDI3513 hypothetical protein
YP_002277217.1	KEGG: gdi:GDI3512 putative signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein
YP_002277218.1	PFAM: MgtC/SapB transporter; KEGG: gdi:GDI3511 hypothetical protein
YP_002277219.1	KEGG: gdi:GDI3510 hypothetical protein
YP_002277220.1	KEGG: gdi:GDI3509 hypothetical protein
YP_002277221.1	TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; Haemagluttinin repeat-containing protein; KEGG: gdi:GDI3508 putative autotransporter protein
YP_002277222.1	TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: gdi:GDI3507 hypothetical protein
YP_002277223.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI3506 putative short-chain dehydrogenase/reductase protein
YP_002277224.1	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway
YP_002277225.1	PFAM: Colicin V production protein; KEGG: gdi:GDI3504 putative colicin V
YP_002277226.1	KEGG: gdi:GDI3503 hypothetical protein
YP_002277227.1	TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein; KEGG: gdi:GDI3502 putative methionine synthase
YP_002277228.1	KEGG: gdi:GDI3500 hypothetical protein
YP_002277229.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI3499 putative ABC transporter protein
YP_002277230.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI3498 putative secretion protein
YP_002277231.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: gdi:GDI3497 hypothetical protein
YP_002277232.1	PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_2 repeat protein; KEGG: gdi:GDI3495 putative glycosyl transferase
YP_002277233.1	KEGG: gdi:GDI3494 hypothetical protein
YP_002277234.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI3493 putative glycosyl transferase
YP_002277235.1	PFAM: protein of unknown function UPF0060; KEGG: gdi:GDI3492 hypothetical protein
YP_002277236.1	catalyzes the hydrolysis of pyrophosphate to phosphate
YP_002277237.1	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence
YP_002277238.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gdi:GDI3489 putative N-acetyltransferase protein
YP_002277239.1	KEGG: gdi:GDI3488 hypothetical protein
YP_002277240.1	SMART: regulatory protein Crp; KEGG: gdi:GDI3487 putative regulatory protein
YP_002277241.1	PFAM: protein of unknown function DUF179; KEGG: gdi:GDI3486 hypothetical protein
YP_002277242.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: gdi:GDI3485 NADP-dependent L-serine/L-allo-threonine dehydrogenase
YP_002277243.1	PFAM: protein of unknown function DUF344; KEGG: gdi:GDI3484 polyphosphate kinase
YP_002277244.1	KEGG: gdi:GDI3483 hypothetical protein
YP_002277245.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI3480 putative transcriptional regulator LysR
YP_002277246.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: gdi:GDI3479 putative nucleoside-diphosphate-sugar epimerase dehydratase protein
YP_002277247.1	PFAM: alpha/beta hydrolase fold; KEGG: gdi:GDI3478 putative hydrolase protein
YP_002277248.1	PFAM: DoxX family protein; KEGG: gdi:GDI3477 hypothetical protein
YP_002277249.1	KEGG: gdi:GDI3476 ATP-dependent Clp protease ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_002277250.1	involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA
YP_002277251.1	PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: gdi:GDI3473 putative D-alanyl-D-alanin carboxypeptidase
YP_002277252.1	KEGG: gdi:GDI3472 putative methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24
YP_002277253.1	KEGG: gdi:GDI3471 putative gamma-glutamyltranspeptidase precursor; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_002277254.1	PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; KEGG: gdi:GDI3470 hypothetical protein
YP_002277255.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA
YP_002277256.1	PFAM: conserved hypothetical protein; KEGG: gdi:GDI3467 hypothetical protein
YP_002277257.1	involved in a recombinational process of DNA repair, independent of the recBC complex
YP_002277258.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI3465 putative short-chain dehydrogenase/reductase
YP_002277259.1	TIGRFAM: dihydroneopterin aldolase; KEGG: gdi:GDI3464 putative dihydroneopterin aldolase
YP_002277260.1	PFAM: conserved hypothetical protein; KEGG: gdi:GDI3463 hypothetical protein
YP_002277261.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
YP_002277262.1	KEGG: gdi:GDI3461 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region
YP_002277263.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
YP_002277264.1	PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: gdi:GDI3459 alpha-ketoglutarate-dependent taurine dioxygenase
YP_002277265.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI3458 putative TonB-dependent receptor
YP_002277266.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI3457 putative transporter protein
YP_002277267.1	PFAM: aldo/keto reductase; KEGG: gdi:GDI3455 putative oxidoreductase
YP_002277268.1	PFAM: peptidase M16 domain protein; KEGG: gdi:GDI3451 insulinase protein
YP_002277269.1	PFAM: beta-lactamase; KEGG: gdi:GDI3450 putative penicillin-binding protein
YP_002277270.1	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: gdi:GDI3449 putative bacterioferritin
YP_002277271.1	KEGG: gdi:GDI3448 hypothetical protein
YP_002277272.1	KEGG: gdi:GDI3447 hypothetical protein
YP_002277273.1	PFAM: protein of unknown function DUF1674; KEGG: gdi:GDI3446 hypothetical protein
YP_002277274.1	KEGG: gdi:GDI3445 hypothetical protein
YP_002277275.1	TIGRFAM: cytochrome c-type biogenesis protein CcmI; KEGG: gdi:GDI3444 hypothetical protein
YP_002277276.1	PFAM: cytochrome C biogenesis protein; KEGG: gdi:GDI3443 putative cytochrome c-type biogenesis protein
YP_002277277.1	TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: gdi:GDI3442 putative thioredoxin disulfide isomerase
YP_002277278.1	TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: gdi:GDI3441 putative cytochrome c-type biogenesis protein CycK
YP_002277279.1	CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane
YP_002277280.1	KEGG: gdi:GDI3439 hypothetical protein
YP_002277281.1	TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: gdi:GDI3438 putative heme exporter protein C
YP_002277282.1	PFAM: YCII-related; KEGG: gdi:GDI3437 hypothetical protein
YP_002277283.1	PFAM: protein of unknown function DUF55; KEGG: gdi:GDI3436 hypothetical protein
YP_002277284.1	KEGG: gdi:GDI3435 hypothetical protein
YP_002277285.1	KEGG: gdi:GDI3434 hypothetical protein
YP_002277286.1	KEGG: gdi:GDI3433 hypothetical protein
YP_002277287.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: gdi:GDI3432 2-ketogluconate reductase
YP_002277288.1	KEGG: gdi:GDI3431 putative leucyl/phenylalanyl-tRNA--protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase
YP_002277289.1	KEGG: gdi:GDI3430 hypothetical protein
YP_002277290.1	KEGG: gdi:GDI3429 hypothetical protein
YP_002277291.1	KEGG: gdi:GDI3427 hypothetical protein
YP_002277292.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: gdi:GDI3426 putative peroxiredoxin bcp
YP_002277293.1	PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: gdi:GDI3425 putative glutamate-ammonia-ligase adenylyltransferase
YP_002277294.1	KEGG: gdi:GDI3422 hypothetical protein
YP_002277295.1	PFAM: protein of unknown function DUF195; KEGG: gdi:GDI3421 putative DNA recombination protein
YP_002277296.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gdi:GDI3420 two component transcriptional regulator
YP_002277297.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gdi:GDI3419 putative two-component sensor histidine kinase
YP_002277298.1	PFAM: acriflavin resistance protein; KEGG: gdi:GDI3418 putative acriflavin resistance protein
YP_002277299.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI3417 putative transporter protein
YP_002277300.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI3416 outer membrane efflux protein
YP_002277301.1	binds directly to 23S ribosomal RNA
YP_002277302.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_002277303.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_002277304.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_002277305.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_002277306.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
YP_002277307.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_002277308.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_002277309.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_002277310.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_002277311.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_002277312.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
YP_002277313.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_002277314.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_002277315.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_002277316.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
YP_002277317.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
YP_002277318.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_002277319.1	one of the stabilizing components for the large ribosomal subunit
YP_002277320.1	primary binding protein; helps mediate assembly; involved in translation fidelity
YP_002277321.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_002277322.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_002277323.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_002277324.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif
YP_002277325.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YP_002277326.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
YP_002277327.1	binds 5S rRNA along with protein L5 and L25
YP_002277328.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_002277329.1	PFAM: ribosomal protein L30; KEGG: gdi:GDI3386 putative 50S ribosomal protein L30
YP_002277330.1	late assembly protein
YP_002277331.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
YP_002277332.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
YP_002277333.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_002277334.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_002277335.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_002277336.1	is a component of the macrolide binding site in the peptidyl transferase center
YP_002277337.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: gdi:GDI3378 putative dTDP-glucose 4,6-dehydratase
YP_002277338.1	TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: gdi:GDI3377 putative glucose-1-phosphate thymidylyltransferase 1
YP_002277339.1	KEGG: gdi:GDI3376 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related
YP_002277340.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: gdi:GDI3375 dTDP-4-dehydrorhamnose reductase
YP_002277341.1	TIGRFAM: rhamnosyltransferase; PFAM: glycosyl transferase family 2; KEGG: gdi:GDI3374 putative glycosyl transferase
YP_002277342.1	KEGG: gdi:GDI3373 hypothetical protein
YP_002277343.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: gdi:GDI3372 hypothetical protein
YP_002277344.1	PFAM: glycosyl transferase family 2; KEGG: gdi:GDI3371 putative glycosyl transferase
YP_002277345.1	PFAM: glycosyl transferase family 2; KEGG: gdi:GDI3370 putative glycosyl transferase
YP_002277346.1	PFAM: protein of unknown function DUF1328; KEGG: gdi:GDI3369 hypothetical protein
YP_002277347.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI3368 outer membrane protein
YP_002277348.1	PFAM: acriflavin resistance protein; KEGG: gdi:GDI3367 putative multidrug resistance protein MdtC
YP_002277349.1	PFAM: acriflavin resistance protein; KEGG: gdi:GDI3366 putative multidrug resistance protein MdtB
YP_002277350.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI3365 putative multidrug resistance protein MdtA
YP_002277351.1	KEGG: gdi:GDI3364 putative general stress response protein
YP_002277352.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
YP_002277353.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: gdi:GDI3362 putative DNA methylase
YP_002277354.1	KEGG: gdi:GDI3361 hypothetical protein
YP_002277355.1	KEGG: gdi:GDI3360 hypothetical protein
YP_002277356.1	TIGRFAM: conserved hypothetical membrane protein; KEGG: gdi:GDI3359 hypothetical protein
YP_002277357.1	PFAM: protein of unknown function DUF58; KEGG: gdi:GDI3358 hypothetical protein
YP_002277358.1	PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: gdi:GDI3357 hypothetical protein
YP_002277359.1	PFAM: protein of unknown function DUF1285; KEGG: gdi:GDI3356 hypothetical protein
YP_002277360.1	PFAM: Polynucleotide adenylyltransferase region; KEGG: gdi:GDI3355 putative tRNA nucleotidyltransferase
YP_002277361.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI3354 putative ABC transporter protein
YP_002277362.1	PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI3353 multidrug resistance protein A
YP_002277363.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI3352 putative multidrug resistance protein B
YP_002277364.1	PFAM: NUDIX hydrolase; KEGG: gdi:GDI3351 putative (di)nucleoside polyphosphate hydrolase
YP_002277365.1	hydrolyzes diadenosine polyphosphate
YP_002277366.1	KEGG: gdi:GDI3349 carboxy-terminal protease protein; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_002277367.1	PFAM: Peptidase M23; KEGG: gdi:GDI3348 putative peptidase protein
YP_002277368.1	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
YP_002277369.1	TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: gdi:GDI3346 putative peptide methionine sulfoxide reductase
YP_002277370.1	TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: gdi:GDI3345 uracil phosphoribosyltransferase
YP_002277371.1	PFAM: protein of unknown function DUF1458; KEGG: gdi:GDI3344 hypothetical protein
YP_002277372.1	PFAM: PilT protein domain protein; KEGG: gdi:GDI3343 hypothetical protein
YP_002277373.1	KEGG: gdi:GDI3342 hypothetical protein
YP_002277374.1	catalyzes the formation of 2-oxobutanoate from L-threonine
YP_002277375.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
YP_002277376.1	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity
YP_002277377.1	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers
YP_002277378.1	KEGG: gdi:GDI3337 hypothetical protein
YP_002277379.1	KEGG: gdi:GDI3336 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein
YP_002277381.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria
YP_002277382.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gdi:GDI3334 putative acetyl transferase protein
YP_002277383.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
YP_002277384.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_002277385.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
YP_002277386.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: gdi:GDI3330 putative cyclopropane-fatty-acyl-phospholipid synthase
YP_002277387.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
YP_002277388.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: gdi:GDI3328 peptidyl-prolyl cis-trans isomerase SurA
YP_002277389.1	PFAM: Organic solvent tolerance protein; KEGG: gdi:GDI3327 organic solvent tolerance protein precursor
YP_002277390.1	PFAM: permease YjgP/YjgQ family protein; KEGG: gdi:GDI3326 hypothetical protein
YP_002277391.1	PFAM: permease YjgP/YjgQ family protein; KEGG: gdi:GDI3325 putative permease
YP_002277392.1	PFAM: FAD linked oxidase domain protein; KEGG: gdi:GDI3324 putative D-lactate dehydrogenase
YP_002277393.1	KEGG: gdi:GDI3323 hypothetical protein
YP_002277394.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: gdi:GDI3322 hypothetical protein
YP_002277395.1	TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: gdi:GDI3321 inositol monophosphatase
YP_002277396.1	PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: gdi:GDI3320 cytosol aminopeptidase protein
YP_002277397.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3864 putative transposase
YP_002277398.1	binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB
YP_002277399.1	PFAM: aldo/keto reductase; KEGG: gdi:GDI3317 oxidoreductase protein
YP_002277400.1	KEGG: gdi:GDI3316 hypothetical protein
YP_002277401.1	KEGG: gdi:GDI3316 hypothetical protein
YP_002277402.1	KEGG: gdi:GDI3314 hypothetical protein
YP_002277403.1	KEGG: gdi:GDI3313 hypothetical protein
YP_002277404.1	KEGG: gdi:GDI3312 hypothetical protein
YP_002277405.1	PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: gdi:GDI3310 putative NADH-quinone oxidoreductase chain B
YP_002277406.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: gdi:GDI3309 putative CDP-diacylglycerol--serine O-phosphatidyltransferase
YP_002277407.1	catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine
YP_002277408.1	KEGG: gdi:GDI3307 hypothetical protein
YP_002277409.1	KEGG: gdi:GDI3306 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein
YP_002277410.1	TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI3305 putative acetoacetyl-CoA reductase
YP_002277411.1	PFAM: alpha/beta hydrolase fold; KEGG: gdi:GDI3304 putative poly-beta-hydroxybutyrate polymerase
YP_002277412.1	TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: gdi:GDI3301 putative polyhydroxyalkanoate synthesis regulators
YP_002277413.1	KEGG: gdi:GDI3300 hypothetical protein
YP_002277414.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: gdi:GDI3298 putative acetyl transferase
YP_002277415.1	PFAM: protein of unknown function DUF218; KEGG: gdi:GDI3297 hypothetical protein
YP_002277416.1	PFAM: protein of unknown function DUF214; KEGG: gdi:GDI3296 hypothetical protein
YP_002277417.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI3295 ABC transporter protein
YP_002277418.1	KEGG: gdi:GDI3294 hypothetical protein
YP_002277419.1	PFAM: CheW domain protein; KEGG: gdi:GDI3293 chemotaxis protein CheW
YP_002277420.1	PFAM: MCP methyltransferase CheR-type; KEGG: gdi:GDI3292 putative chemotaxis protein methyltransferase
YP_002277421.1	SMART: CheW domain protein; KEGG: gdi:GDI3291 hypothetical protein
YP_002277422.1	PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: gdi:GDI3290 ethyl-accepting chemotaxis protein TlpA
YP_002277423.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: gdi:GDI3289 putative chemotaxis protein CheA
YP_002277424.1	PFAM: CheB methylesterase; response regulator receiver; KEGG: gdi:GDI3288 putative chemotaxis response regulator protein-glutamate methylesteras
YP_002277425.1	PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gdi:GDI3287 putative histidine kinase
YP_002277426.1	KEGG: gdi:GDI3286 putative two-component sensor histidine kinase/response regulator hybrid protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein
YP_002277427.1	heat shock protein involved in degradation of misfolded proteins
YP_002277428.1	heat shock protein involved in degradation of misfolded proteins
YP_002277429.1	PFAM: Fe-S metabolism associated SufE; KEGG: gdi:GDI3283 putative cysteine desulfuration protein SufE
YP_002277430.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI3282 putative transporter protein
YP_002277431.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: gdi:GDI3281 aldehyde dehydrogenase protein
YP_002277432.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: gdi:GDI3280 putative xanthine dehydrogenase iron-sulfur-binding subunit
YP_002277433.1	PFAM: cytochrome c class I; KEGG: gdi:GDI3279 putative alcohol dehydrogenase cytochrome c subunit precursor
YP_002277434.1	TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: Pyrrolo-quinoline quinone; KEGG: gdi:GDI3277 putative quinoprotein glucose dehydrogenase
YP_002277435.1	PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: gdi:GDI3276 D-mannonate oxidoreductase
YP_002277436.1	PFAM: ribosomal protein L35; KEGG: gdi:GDI3274 putative 50S ribosomal protein L35
YP_002277437.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_002277438.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_002277439.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
YP_002277440.1	KEGG: gdi:GDI3270 putative lipid-A-disaccharide synthase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19
YP_002277441.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI3269 dehydrogenase
YP_002277442.1	KEGG: gdi:GDI3268 hypothetical protein
YP_002277443.1	PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: gdi:GDI3267 putative phosphoribosyl-AMP cyclohydrolase
YP_002277444.1	TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: gdi:GDI3266 putative aminomethyltransferase protein (glycine cleavage)
YP_002277445.1	PFAM: glycosyl transferase family 9; KEGG: gdi:GDI3265 putative glycosyl transferase
YP_002277446.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI3264 putative glycosyl transferase
YP_002277447.1	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
YP_002277448.1	KEGG: gdi:GDI3262 hypothetical protein
YP_002277449.1	KEGG: gdi:GDI3261 hypothetical protein
YP_002277450.1	PFAM: Pyrrolo-quinoline quinone; KEGG: gdi:GDI3260 pyrrolo-quinoline quinone
YP_002277451.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_002277452.1	TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: gdi:GDI3258 putative gluconate permease
YP_002277453.1	KEGG: gdi:GDI3256 putative galactose-proton symporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1
YP_002277454.1	PFAM: dienelactone hydrolase; KEGG: gdi:GDI3255 carboxymethylenebutenolidase
YP_002277455.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI3254 putative transporter protein
YP_002277456.1	KEGG: gdi:GDI3253 hypothetical protein
YP_002277457.1	TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: gdi:GDI3252 putative 4-hydroxybenzoate polyprenyl transferase
YP_002277458.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
YP_002277459.1	KEGG: gdi:GDI3250 glutamate-cysteine ligase precursor; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase GCS2
YP_002277460.1	PFAM: Rubrerythrin; protein of unknown function DUF125 transmembrane; KEGG: gdi:GDI3249 putative rubrerythrin protein
YP_002277461.1	PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: gdi:GDI3248 putative outer membrane lipoprotein carrier protein LolA
YP_002277462.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: gdi:GDI3247 putative methylase protein
YP_002277463.1	KEGG: gdi:GDI3246 hypothetical protein
YP_002277464.1	KEGG: gdi:GDI3245 hypothetical protein
YP_002277465.1	PFAM: lipid A biosynthesis acyltransferase; KEGG: gdi:GDI3244 putative lipid A biosynthesis lauroyl acyltransferase
YP_002277466.1	KEGG: gdi:GDI3243 putative tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase
YP_002277467.1	PFAM: protein of unknown function DUF374; Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: gdi:GDI3242 putative 3-deoxy-D-manno-octulosonic-acid transferase
YP_002277468.1	PFAM: conserved hypothetical protein; KEGG: gdi:GDI3240 hypothetical protein
YP_002277469.1	PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: gdi:GDI3239 putative sulfite reductase
YP_002277470.1	KEGG: gdi:GDI3238 hypothetical protein
YP_002277471.1	PFAM: protein synthesis factor GTP-binding; adenylylsulfate kinase; elongation factor Tu domain 2 protein; KEGG: gdi:GDI3237 putative sulfate adenylyltransferase subunit 1
YP_002277472.1	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP
YP_002277473.1	catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite
YP_002277474.1	PFAM: UspA domain protein; KEGG: gdi:GDI3233 universal stress protein
YP_002277475.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate
YP_002277476.1	KEGG: gdi:GDI3231 enoyl-[acyl-carrier-protein] reductase
YP_002277477.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_002277478.1	PFAM: OsmC family protein; KEGG: gdi:GDI3229 putative peroxiredoxin OsmC
YP_002277479.1	Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine
YP_002277480.1	TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; KEGG: gdi:GDI3227 methionine biosynthesis MetW
YP_002277481.1	PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: gdi:GDI3226 hypothetical protein
YP_002277482.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: gdi:GDI3225 putative cold-shock DEAD box protein A
YP_002277483.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI3224 putative ABC transporter
YP_002277484.1	PFAM: ABC-2 type transporter; KEGG: gdi:GDI3223 putative ABC transporter
YP_002277485.1	PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI3222 putative transporter protein
YP_002277486.1	PFAM: ETC complex I subunit conserved region; KEGG: gdi:GDI3220 putative oxidoreductase
YP_002277487.1	PFAM: sugar isomerase (SIS); KEGG: gdi:GDI3219 putative sugar isomerase
YP_002277488.1	catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively
YP_002277489.1	TIGRFAM: export-related chaperone CsaA; PFAM: t-RNA-binding domain protein; KEGG: gdi:GDI3217 putative methionyl-tRNA synthetase
YP_002277490.1	PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: gdi:GDI3216 hypothetical protein
YP_002277491.1	PFAM: Thiolase; KEGG: gdi:GDI3215 hypothetical protein
YP_002277492.1	KEGG: gdi:GDI3214 hypothetical protein
YP_002277493.1	KEGG: gdi:GDI3213 hypothetical protein
YP_002277494.1	PFAM: inner-membrane translocator; KEGG: gdi:GDI3212 putative amino acid transporter
YP_002277495.1	PFAM: inner-membrane translocator; KEGG: gdi:GDI3211 putative amino acid transporter
YP_002277496.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI3210 putative ABC transporter
YP_002277497.1	PFAM: basic membrane lipoprotein; KEGG: gdi:GDI3209 putative lipoprotein
YP_002277498.1	PFAM: isochorismatase hydrolase; KEGG: gdi:GDI3208 pyrazinamidase/nicotinamidase
YP_002277499.1	PFAM: Rieske [2Fe-2S] domain protein; KEGG: gdi:GDI3207 putative oxidoreductase protein
YP_002277500.1	KEGG: gdi:GDI3206 hypothetical protein
YP_002277501.1	TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: gdi:GDI3205 putative transcriptional regulator
YP_002277502.1	PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein; KEGG: gdi:GDI3204 hypothetical protein
YP_002277503.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: gdi:GDI3203 putative steroid protein related
YP_002277504.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: gdi:GDI3202 putative transporter protein
YP_002277505.1	KEGG: gdi:GDI3200 putative DNA ligase; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: NAD-dependent DNA ligase
YP_002277506.1	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: gdi:GDI3199 DNA repair protein RecN
YP_002277507.1	TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: gdi:GDI3198 hypothetical protein
YP_002277508.1	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis
YP_002277509.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
YP_002277510.1	PFAM: cell division protein FtsA; KEGG: gdi:GDI3195 putative cell division protein FtsA
YP_002277511.1	PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: gdi:GDI3194 putative cell division protein FtsQ
YP_002277512.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
YP_002277513.1	KEGG: gdi:GDI3193 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein
YP_002277514.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
YP_002277515.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
YP_002277516.1	PFAM: cell cycle protein; KEGG: gdi:GDI3190 putative cell division protein FtsW
YP_002277517.1	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation
YP_002277518.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_002277519.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: gdi:GDI3187 putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
YP_002277520.1	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate
YP_002277521.1	PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: gdi:GDI3185 putative peptidoglycan synthetase FtsI
YP_002277522.1	KEGG: gdi:GDI3184 putative inner-membrane translocator
YP_002277523.1	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: gdi:GDI3183 S-adenosyl-methyltransferase MraW
YP_002277524.1	MraZ; UPF0040; crystal structure shows similarity to AbrB
YP_002277525.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: gdi:GDI3180 putative lipase protein
YP_002277526.1	KEGG: gdi:GDI3179 putative ubiquinol-cytochrome c reductase iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein
YP_002277527.1	KEGG: gdi:GDI3178 hypothetical protein
YP_002277528.1	KEGG: gdi:GDI3177 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase
YP_002277529.1	KEGG: gdi:GDI3176 hypothetical protein
YP_002277530.1	KEGG: gdi:GDI3175 hypothetical protein
YP_002277531.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_002277532.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
YP_002277533.1	involved in the peptidyltransferase reaction during translation
YP_002277534.1	PFAM: ribosomal protein L21; KEGG: gdi:GDI3171 putative 50S ribosomal protein L21
YP_002277535.1	PFAM: aldo/keto reductase; KEGG: gdi:GDI3170 putative 2,5-diketo-D-gluconic acid reductase
YP_002277536.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; KEGG: gdi:GDI3168 putative signalling protein, GGDEF family
YP_002277537.1	TIGRFAM: guanine deaminase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: gdi:GDI3167 putative guanine deaminase
YP_002277538.1	PFAM: Fusaric acid resistance protein conserved region; KEGG: gdi:GDI3166 putative fusaric acid resistence protein
YP_002277539.1	PFAM: Uracil-DNA glycosylase superfamily; KEGG: gdi:GDI3165 uracil-DNA glycosylase
YP_002277540.1	PFAM: Glutathione S-transferase domain; KEGG: gdi:GDI3164 putative glutathione S-transferase
YP_002277541.1	TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: gdi:GDI3163 ribokinase
YP_002277542.1	PFAM: ROSMUCR transcriptional regulator; KEGG: gdi:GDI3161 putative transcriptional regulator protein
YP_002277543.1	KEGG: gdi:GDI3160 putative peptidase; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49
YP_002277544.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_002277545.1	KEGG: gdi:GDI3158 hypothetical protein
YP_002277546.1	KEGG: gbe:GbCGDNIH1_0357 hypothetical protein
YP_002277547.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI3156 transcriptional regulator LysR
YP_002277548.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: gdi:GDI3155 thioredoxin reductase
YP_002277549.1	PFAM: regulatory protein AsnC/Lrp family; KEGG: gdi:GDI3154 putative transcriptional regulator, AsnC family
YP_002277550.1	PFAM: glycosyl transferase family 2; GtrA family protein; KEGG: gdi:GDI3153 putative dolichol-phosphate mannosyltransferase
YP_002277551.1	KEGG: gdi:GDI3152 putative 4-amino-4-deoxy-L-arabinose transferase
YP_002277552.1	PFAM: response regulator receiver; KEGG: gdi:GDI3151 putative two component transcriptional regulator, winged helix family
YP_002277553.1	PFAM: NUDIX hydrolase; KEGG: gdi:GDI3150 putative nucleoside diphosphate
YP_002277554.1	PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: gdi:GDI3149 dipeptidyl-peptidase
YP_002277555.1	KEGG: gdi:GDI3148 hypothetical protein
YP_002277556.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
YP_002277557.1	KEGG: gga:770558 hypothetical protein LOC770558
YP_002277558.1	KEGG: rsq:Rsph17025_4051 hypothetical protein
YP_002277559.1	KEGG: rsq:Rsph17025_4049 hypothetical protein
YP_002277560.1	KEGG: mca:MCA1539 hypothetical protein
YP_002277561.1	KEGG: mlo:mll9171 virulence factor SrfB homolog
YP_002277562.1	KEGG: mlo:mll9170 virulence factor SrfC homolog
YP_002277563.1	KEGG: rsq:Rsph17025_4054 protein of unknown function DUF323
YP_002277564.1	KEGG: mca:MCA1842 hypothetical protein
YP_002277565.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pap:PSPA7_0144 probable ATP-binding component of ABC transporter
YP_002277566.1	PFAM: protein of unknown function DUF214; KEGG: mca:MCA1840 hypothetical protein
YP_002277567.1	PFAM: protein of unknown function DUF323; KEGG: ent:Ent638_4233 protein of unknown function DUF323
YP_002277568.1	KEGG: mca:MCA2144 lipoprotein, putative
YP_002277569.1	KEGG: smu:SMU.610 cell surface antigen SpaP
YP_002277570.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: gdi:GDI1127 putative transposase
YP_002277571.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bid:Bind_2340 periplasmic binding protein/LacI transcriptional regulator
YP_002277572.1	PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: gdi:GDI3143 putative transcriptional regulator, AraC family
YP_002277573.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: gdi:GDI3142 putative D-xylulose reductase
YP_002277574.1	PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: gdi:GDI3141 phosphomannomutase
YP_002277575.1	KEGG: gdi:GDI3139 hypothetical protein
YP_002277576.1	PFAM: peptidase T2 asparaginase 2; KEGG: gdi:GDI3138 putative L-asparaginase precursor
YP_002277577.1	catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate
YP_002277578.1	KEGG: gdi:GDI3136 hypothetical protein
YP_002277579.1	PFAM: arsenate reductase and related; KEGG: gdi:GDI3134 putative regulator protein, ArsR family
YP_002277580.1	PFAM: Heavy metal transport/detoxification protein; KEGG: gdi:GDI3133 putative heavy metal transporter
YP_002277581.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: gdi:GDI3132 putative heavy metal transporter
YP_002277582.1	PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gdi:GDI3131 putative cobalamin binding protein
YP_002277583.1	KEGG: gdi:GDI3129 hypothetical protein
YP_002277584.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: gdi:GDI3128 putative endonuclease protein
YP_002277585.1	PFAM: glutamyl-tRNA synthetase class Ic; KEGG: gdi:GDI3127 putative glutamyl-Q tRNA(Asp) synthetase
YP_002277586.1	PFAM: aminotransferase class I and II; KEGG: gdi:GDI3126 aspartate aminotransferase
YP_002277587.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
YP_002277588.1	PFAM: transposase mutator type; KEGG: gdi:GDI2780 putative transposase
YP_002277589.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI3123 putative thiamine transport ATP-binding protein
YP_002277590.1	phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway
YP_002277591.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: gdi:GDI3121 putative sugar transporter
YP_002277592.1	KEGG: gdi:GDI3119 hypothetical protein
YP_002277593.1	KEGG: gdi:GDI3118 hypothetical protein
YP_002277594.1	KEGG: gdi:GDI3115 shikimate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase
YP_002277595.1	TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: gdi:GDI3114 putative cobalamin adenosyltransferase
YP_002277596.1	KEGG: gdi:GDI3113 hypothetical protein
YP_002277597.1	KEGG: gdi:GDI3112 putative alpha/beta hydrolase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold
YP_002277598.1	PFAM: protein of unknown function DUF423; KEGG: gdi:GDI3111 hypothetical protein
YP_002277599.1	KEGG: gdi:GDI3110 putative RNA 2'-O-ribose methyltransferase MtfA
YP_002277600.1	PFAM: Integrase catalytic region; KEGG: gdi:GDI3727 putative integrase
YP_002277601.1	KEGG: gdi:GDI3108 hypothetical protein
YP_002277602.1	PFAM: Thioredoxin domain; KEGG: gdi:GDI3107 putative thioredoxin protein
YP_002277603.1	TIGRFAM: oligoendopeptidase, M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: gdi:GDI3106 oligoendopeptidase F
YP_002277604.1	PFAM: Luciferase-like monooxygenase; KEGG: gdi:GDI3105 putative oxidoreductase protein
YP_002277605.1	TIGRFAM: oligopeptide transporters, OPT superfamily; oligopeptide transporter, OPT family; PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: gdi:GDI3104 putative oligopeptide transporter
YP_002277606.1	KEGG: gdi:GDI3103 hypothetical protein
YP_002277607.1	KEGG: gdi:GDI3102 putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein
YP_002277608.1	catalyzes the formation of O-phospho-L-homoserine from L-homoserine
YP_002277609.1	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids
YP_002277610.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI3099 putative ABC transporter
YP_002277611.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2057 ABC transporter permease protein
YP_002277612.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI3097 putative phosphate transport system permease protein
YP_002277613.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI3814 putative phosphate transport system permease protein
YP_002277614.1	ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation
YP_002277615.1	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: gdi:GDI3094 phosphate transport system protein
YP_002277616.1	KEGG: gdi:GDI3093 hypothetical protein
YP_002277617.1	KEGG: gdi:GDI3092 putative signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase
YP_002277618.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
YP_002277619.1	TIGRFAM: 16S rRNA processing protein RimM; PFAM: PRC-barrel domain protein; KEGG: gdi:GDI3090 putative 16S rRNA-processing protein RimM
YP_002277620.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
YP_002277621.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_002277622.1	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
YP_002277623.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
YP_002277624.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
YP_002277625.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_002277626.1	KEGG: gdi:GDI3083 putative peptide deformylase 2; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase
YP_002277627.1	TIGRFAM: rpsU-divergently transcribed protein; KEGG: gdi:GDI3082 hypothetical protein
YP_002277628.1	PFAM: regulatory protein MarR; KEGG: gdi:GDI3081 putative transcriptional regulator, MarR family
YP_002277629.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gdi:GDI3080 putative transcriptional regulatory protein OmpR
YP_002277630.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: gdi:GDI3079 putative sensor signal transduction histidine kinase
YP_002277631.1	PFAM: SmpA/OmlA domain protein; KEGG: gdi:GDI3078 lipoprotein SmpA/OmlA family
YP_002277632.1	KEGG: gdi:GDI3077 hypothetical protein
YP_002277633.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
YP_002277634.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
YP_002277635.1	KEGG: gdi:GDI3075 putative 3-oxoacyl-[acyl-carrier-protein] synthase 3 (3-oxoacyl [acyl-carrier-protein] synthase III) (beta-ketoacyl-ACP synthase III (KAS III); TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
YP_002277636.1	TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: gdi:GDI3074 putative integration host factor alpha-subunit
YP_002277637.1	PFAM: regulatory protein MerR; KEGG: gdi:GDI3073 putative transcriptional regulatory protein, MerR family
YP_002277638.1	PFAM: protein of unknown function UPF0118; KEGG: gdi:GDI3072 putative permease
YP_002277639.1	PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: gdi:GDI3071 putative protease II
YP_002277640.1	KEGG: gdi:GDI3070 hypothetical protein
YP_002277641.1	PFAM: NUDIX hydrolase; KEGG: gdi:GDI3069 putative nucleoside diphosphate
YP_002277642.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI3068 putative ABC transporter
YP_002277643.1	KEGG: gdi:GDI3067 hypothetical protein
YP_002277644.1	required for 70S ribosome assembly
YP_002277645.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_002277646.1	PFAM: peptidase S10 serine carboxypeptidase; KEGG: gdi:GDI3064 putative serine carboxypeptidase
YP_002277647.1	PFAM: beta-lactamase domain protein; KEGG: gdi:GDI3063 putative metallo-beta-lactamase superfamily protein
YP_002277648.1	KEGG: gdi:GDI3062 putative phosphoenolpyruvate carboxylase
YP_002277649.1	PFAM: protein of unknown function DUF445; KEGG: gdi:GDI3061 hypothetical protein
YP_002277650.1	TIGRFAM: transcriptional regulator, Rrf2 family; FeS assembly SUF system regulator; PFAM: protein of unknown function UPF0074; KEGG: gdi:GDI3060 putative transcriptional regulator, rrf2 family
YP_002277651.1	with SufCD activates cysteine desulfurase SufS
YP_002277652.1	KEGG: gdi:GDI3058 FeS assembly protein SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase
YP_002277653.1	TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: gdi:GDI3057 putative FeS assembly protein SufD
YP_002277654.1	TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: gdi:GDI3056 putative cysteine desulfurase
YP_002277655.1	TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: gdi:GDI3055 putative nitrogen fixation protein NifU
YP_002277656.1	TIGRFAM: FeS assembly SUF system protein; PFAM: protein of unknown function DUF59; KEGG: gdi:GDI3054 putative phenylacetic acid degradation protein PaaD
YP_002277657.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: gdi:GDI3053 putative iron-binding protein IscA
YP_002277658.1	KEGG: gdi:GDI3052 hypothetical protein
YP_002277659.1	KEGG: gdi:GDI3051 hypothetical protein
YP_002277660.1	KEGG: gdi:GDI3050 23S rRNA (uracil-5-)-methyltransferase RumA
YP_002277661.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: gdi:GDI3049 cold-shock DEAD box protein A homolog
YP_002277662.1	PFAM: glycoside hydrolase 15-related; KEGG: gdi:GDI3048 putative glycosyl hydrolase protein
YP_002277663.1	KEGG: gdi:GDI3047 putative integral membrane protein
YP_002277664.1	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: gdi:GDI3046 putative sugar kinase
YP_002277665.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
YP_002277666.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
YP_002277667.1	binds and unfolds substrates as part of the ClpXP protease
YP_002277668.1	KEGG: gdi:GDI3042 putative ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_002277669.1	PFAM: histone family protein DNA-binding protein; KEGG: gdi:GDI3041 DNA-binding protein HU
YP_002277670.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: gdi:GDI3040 putative NADH-ubiquinone oxidoreductase chain 3
YP_002277671.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
YP_002277672.1	KEGG: gdi:GDI3038 NADH-quinone oxidoreductase chain C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit
YP_002277673.1	Catalyzes the transfer of electrons from NADH to quinone
YP_002277674.1	TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: gdi:GDI3036 NADH-quinone oxidoreductase chain E
YP_002277675.1	part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase
YP_002277676.1	Catalyzes the transfer of electrons from NADH to quinone
YP_002277677.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: gdi:GDI3033 putative NADH-quinone oxidoreductase chain H
YP_002277678.1	Catalyzes the transfer of electrons from NADH to quinone
YP_002277679.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: gdi:GDI3031 putative NADH-quinone oxidoreductase chain J
YP_002277680.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: gdi:GDI3030 putative NADH-quinone oxidoreductase chain K
YP_002277681.1	KEGG: gdi:GDI3029 putative NADH-quinone oxidoreductase chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I)
YP_002277682.1	TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: gdi:GDI3028 putative NADH-quinone oxidoreductase chain N
YP_002277683.1	TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: gdi:GDI3027 putative biotin--[acetyl-CoA-carboxylase] synthetase
YP_002277684.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: gdi:GDI3025 RNA-metabolising metallo-beta-lactamase protein
YP_002277685.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_002277686.1	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: gdi:GDI3023 putative lipoprotein-releasing system transmembrane protein
YP_002277687.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI3022 putative lipoprotein-releasing system ATP-binding protein LolD
YP_002277688.1	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase
YP_002277689.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_002277690.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_002277691.1	TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: gdi:GDI3017 putative DNA repair protein RecO
YP_002277692.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_002277693.1	Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate
YP_002277694.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_002277695.1	PFAM: amino acid permease-associated region; KEGG: gdi:GDI3013 putative amino acid permease protein
YP_002277696.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_002277697.1	KEGG: gdi:GDI3803 putative transposase
YP_002277698.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: gdi:GDI2999 putative succinylglutamate desuccinylase
YP_002277699.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: gdi:GDI2998 putative ATP-dependent RNA helicase RhlE
YP_002277700.1	PFAM: protein of unknown function DUF1022; KEGG: gdi:GDI2997 hypothetical protein
YP_002277701.1	KEGG: gdi:GDI2996 hypothetical protein
YP_002277702.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gdi:GDI2994 TPR repeat-containing protein
YP_002277703.1	KEGG: gdi:GDI2993 hypothetical protein
YP_002277704.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: gdi:GDI1081 putative aminotransferase
YP_002277705.1	KEGG: gdi:GDI1079 hypothetical protein
YP_002277706.1	KEGG: rec:RHECIAT_CH0001589 putative carbamoyl-phosphate-synthetase protein
YP_002277707.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bph:Bphy_5766 oxidoreductase domain protein
YP_002277708.1	KEGG: gdi:GDI2984 hypothetical protein
YP_002277709.1	PFAM: protein of unknown function DUF937; KEGG: gdi:GDI2983 hypothetical protein
YP_002277710.1	PFAM: N-formylglutamate amidohydrolase; KEGG: gdi:GDI2982 putative N-formylglutamate amidohydrolase
YP_002277711.1	PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: gdi:GDI2980 putative Holliday junction resolvase
YP_002277712.1	TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: gdi:GDI2979 glutamyl-tRNA(Gln) amidotransferase subunit C
YP_002277713.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_002277714.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_002277715.1	KEGG: gdi:GDI2976 hypothetical protein
YP_002277716.1	PFAM: O-antigen polymerase; KEGG: gdi:GDI2975 putative O-antigen polymerase
YP_002277717.1	TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: gdi:GDI2974 putative cytidine deaminase
YP_002277718.1	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: gdi:GDI2973 putative diaminopimelate decarboxylase
YP_002277719.1	KEGG: gdi:GDI2972 hypothetical protein
YP_002277720.1	PFAM: acyltransferase 3; KEGG: gdi:GDI2971 putative acyltransferase
YP_002277721.1	KEGG: gdi:GDI2970 hypothetical protein
YP_002277722.1	catalyzes the formation of arginine from (N-L-arginino)succinate
YP_002277723.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: gdi:GDI2968 putative thiol:disulfide interchange protein TlpA
YP_002277724.1	PFAM: N-formylglutamate amidohydrolase; KEGG: gdi:GDI2967 putative N-formylglutamate amidohydrolase
YP_002277725.1	TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: gdi:GDI2966 putative shikimate dehydrogenase
YP_002277726.1	KEGG: gdi:GDI2965 putative dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase
YP_002277727.1	KEGG: gdi:GDI2964 putative DNA polymerase III epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease
YP_002277728.1	PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; Cache domain protein; KEGG: gdi:GDI2962 putative adenylate cyclase
YP_002277729.1	PFAM: protein of unknown function DUF140; KEGG: gdi:GDI2961 putative ABC transport system permease protein
YP_002277730.1	KEGG: gdi:GDI2960 putative aspartate aminotransferase B
YP_002277731.1	PFAM: Mammalian cell entry related domain protein; KEGG: gdi:GDI2959 putative ABC transporter substrate-binding protein
YP_002277732.1	KEGG: gdi:GDI2958 hypothetical protein
YP_002277733.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: gdi:GDI2957 putative sulfate transporter
YP_002277734.1	KEGG: gdi:GDI2956 hypothetical protein
YP_002277735.1	TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: gdi:GDI2955 succinoglycan protein
YP_002277736.1	KEGG: gdi:GDI2954 hypothetical protein
YP_002277737.1	KEGG: gdi:GDI2953 putative biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB
YP_002277738.1	TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: gdi:GDI2952 putative succinyl-CoA ligase [GDP-forming] alpha-chain
YP_002277739.1	KEGG: gdi:GDI2951 putative succinyl-CoA synthetase beta chain; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein
YP_002277740.1	KEGG: gdi:GDI2950 hypothetical protein
YP_002277741.1	PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: gdi:GDI2949 putative stress responsive protein
YP_002277742.1	PFAM: peptidase M13 neprilysin; peptidase M13; KEGG: gdi:GDI2948 putative metallopeptidase
YP_002277743.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: gdi:GDI2947 putative ABC-type proline/glycine betaine transport protein
YP_002277744.1	KEGG: gdi:GDI2946 hypothetical protein
YP_002277745.1	PFAM: protein of unknown function DUF218; KEGG: gdi:GDI2945 hypothetical protein
YP_002277746.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: gdi:GDI2944 malonyl CoA-acyl carrier protein transacylase
YP_002277747.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI2943 3-oxoacyl-[acyl-carrier-protein] reductase
YP_002277748.1	carries the fatty acid chain in fatty acid biosynthesis
YP_002277749.1	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_002277750.1	PFAM: aminodeoxychorismate lyase; KEGG: gdi:GDI2940 putative aminodeoxychorismate lyase
YP_002277751.1	PFAM: protein of unknown function DUF500; KEGG: gdi:GDI2939 hypothetical protein
YP_002277752.1	PFAM: inositol monophosphatase; KEGG: gdi:GDI2938 inositol-1-monophosphatase
YP_002277753.1	KEGG: gdi:GDI2937 hypothetical protein
YP_002277754.1	PFAM: glycosyl transferase group 1; KEGG: gdi:GDI2936 putative glycosyl transferase
YP_002277755.1	KEGG: gdi:GDI2935 hypothetical protein
YP_002277756.1	PFAM: fatty acid hydroxylase; KEGG: gdi:GDI2934 putative fatty acid hydroxylase
YP_002277757.1	PFAM: permease YjgP/YjgQ family protein; KEGG: gdi:GDI2933 putative permease
YP_002277758.1	PFAM: permease YjgP/YjgQ family protein; KEGG: gdi:GDI2932 putative permease
YP_002277759.1	PFAM: metallophosphoesterase; KEGG: gdi:GDI2931 putative metallophosphoesterase
YP_002277760.1	PFAM: diacylglycerol kinase catalytic region; KEGG: gdi:GDI2930 putative diacylglycerol kinase (DAG) catalytic domain protein
YP_002277761.1	KEGG: gdi:GDI2929 hypothetical protein
YP_002277762.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; aminotransferase class-III; KEGG: gdi:GDI2928 2-amino-3-ketobutyrate coenzyme A ligase
YP_002277763.1	PFAM: phosphopantetheine-binding; KEGG: gdi:GDI2927 putative acyl carrier protein
YP_002277764.1	activates fatty acids by binding to coenzyme A
YP_002277765.1	KEGG: gdi:GDI2924 hypothetical protein
YP_002277766.1	KEGG: gdi:GDI1643 hypothetical protein
YP_002277767.1	KEGG: gdi:GDI1644 hypothetical protein
YP_002277768.1	membrane protein involved in the flagellar export apparatus
YP_002277769.1	PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gdi:GDI1646 putative FlbA protein
YP_002277770.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gdi:GDI1647 putative FlbA protein
YP_002277771.1	PFAM: Lytic transglycosylase catalytic; KEGG: gdi:GDI1648 putative transglycosylase
YP_002277772.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum
YP_002277773.1	KEGG: gdi:GDI1650 putative chemotactic signal-response protein CheL
YP_002277774.1	KEGG: gdi:GDI1651 hypothetical protein
YP_002277775.1	PFAM: glycosyl transferase family 25; KEGG: gdi:GDI1652 glycosyl transferase
YP_002277776.1	KEGG: gbe:GbCGDNIH1_0181 hypothetical protein
YP_002277777.1	KEGG: gdi:GDI1654 putative flagellar basal-body rod protein FlgB
YP_002277778.1	with FlgF and B makes up the proximal portion of the flagellar basal body rod
YP_002277779.1	PFAM: flagellin domain protein; KEGG: gdi:GDI1656 putative flagellin C
YP_002277780.1	PFAM: flagellar hook-basal body complex protein FliE; KEGG: gdi:GDI1657 putative flagellar hook-basal body complex protein FliE
YP_002277781.1	PFAM: export protein FliQ family 3; KEGG: gdi:GDI1658 putative flagellar biosynthetic protein FliQ
YP_002277782.1	KEGG: gdi:GDI1659 putative flagellar biosynthetic protein FliR
YP_002277783.1	PFAM: type III secretion exporter; KEGG: gdi:GDI1660 putative flagellar biosynthetic protein FlhB
YP_002277784.1	PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: gdi:GDI1661 putative flagellar hook protein FlgE
YP_002277785.1	PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: gdi:GDI1662 putative chemoreceptor McpA (methyl-accepting chemotaxis protein)
YP_002277786.1	KEGG: gdi:GDI1663 hypothetical protein
YP_002277787.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: gdi:GDI1665 putative two component response regulator
YP_002277788.1	KEGG: gdi:GDI1666 hypothetical protein
YP_002277789.1	KEGG: gdi:GDI1667 hypothetical protein
YP_002277790.1	involved in type III protein export during flagellum assembly
YP_002277791.1	KEGG: gdi:GDI1669 hypothetical protein
YP_002277792.1	KEGG: gdi:GDI1670 hypothetical protein
YP_002277793.1	PFAM: OmpA/MotB domain protein; KEGG: gdi:GDI1671 putative chemotaxis protein MotB (motility protein B)
YP_002277794.1	With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
YP_002277795.1	KEGG: gdi:GDI1673 hypothetical protein
YP_002277796.1	PFAM: flagellar hook capping protein; KEGG: gdi:GDI1674 putative basal-body rod modification protein FlgD
YP_002277797.1	KEGG: gdi:GDI1675 hypothetical protein
YP_002277798.1	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod
YP_002277799.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_002277800.1	KEGG: gdi:GDI1678 hypothetical protein
YP_002277801.1	TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: gdi:GDI1679 putative flagellar motor switch protein FliN
YP_002277802.1	KEGG: gdi:GDI1680 hypothetical protein
YP_002277803.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus
YP_002277804.1	PFAM: chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein; KEGG: gdi:GDI1682 chemoreceptor McpA (methyl-accepting chemotaxis protein)
YP_002277805.1	KEGG: gdi:GDI1683 hypothetical protein
YP_002277806.1	PFAM: response regulator receiver; KEGG: gdi:GDI1684 putative chemotaxis protein CheY
YP_002277807.1	PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: gdi:GDI1685 putative chemotaxis protein CheA
YP_002277808.1	PFAM: CheW domain protein; KEGG: gdi:GDI1686 putative chemotaxis protein CheW
YP_002277809.1	PFAM: MCP methyltransferase CheR-type; KEGG: gdi:GDI1687 putative chemotaxis protein methyltransferase
YP_002277810.1	PFAM: CheB methylesterase; response regulator receiver; KEGG: gdi:GDI1688 putative chemotaxis response regulator protein-glutamate methylesterase O group 1 operon
YP_002277811.1	PFAM: response regulator receiver; KEGG: gdi:GDI1689 putative chemotaxis protein CheY
YP_002277812.1	stimulates methylation of MCP proteins; PFAM: CheD family protein; KEGG: gdi:GDI1690 putative chemotaxis protein CheD
YP_002277813.1	KEGG: gdi:GDI1691 hypothetical protein
YP_002277814.1	part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod
YP_002277815.1	required for the assembly of the flagellar basal body P-ring; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum
YP_002277816.1	makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella
YP_002277817.1	PFAM: flagellar basal body rod protein; KEGG: gdi:GDI1695 putative flagellar basal-body rod protein FlgF
YP_002277818.1	TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: gdi:GDI1696 putative flagellar hook-associated protein
YP_002277819.1	with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook
YP_002277820.1	KEGG: gdi:GDI1700 putative transcriptional regulator protein
YP_002277821.1	KEGG: gdi:GDI1701 hypothetical protein
YP_002277822.1	with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum
YP_002277823.1	PFAM: flagellar basal body-associated protein FliL; KEGG: gdi:GDI1703 putative flagellar FliL protein
YP_002277824.1	PFAM: Flp/Fap pilin component; KEGG: gdi:GDI1704 putative Flp/Fap pilin component
YP_002277825.1	PFAM: peptidase A24A prepilin type IV; KEGG: gdi:GDI1705 hypothetical protein
YP_002277826.1	TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: gdi:GDI1706 putative pilus assembly protein
YP_002277827.1	PFAM: type II and III secretion system protein; KEGG: gdi:GDI1707 type II and III secretion system protein
YP_002277828.1	KEGG: gdi:GDI1708 putative pilus assembly protein
YP_002277829.1	PFAM: type II secretion system protein E; KEGG: gdi:GDI1709 type II/IV secretion system protein
YP_002277830.1	PFAM: type II secretion system protein; KEGG: gdi:GDI1710 putative type II secretion system protein
YP_002277831.1	PFAM: type II secretion system protein; KEGG: gdi:GDI1711 putative type II secretion system protein
YP_002277832.1	PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: gdi:GDI1712 hypothetical protein
YP_002277833.1	PFAM: TadE family protein; KEGG: gdi:GDI1713 hypothetical protein
YP_002277834.1	KEGG: gdi:GDI1714 hypothetical protein
YP_002277835.1	KEGG: gdi:GDI1715 hypothetical protein
YP_002277836.1	PFAM: amine oxidase; KEGG: gdi:GDI1716 putative amine oxidase
YP_002277837.1	KEGG: gdi:GDI1717 hypothetical protein
YP_002277838.1	KEGG: gdi:GDI1718 hypothetical protein
YP_002277839.1	KEGG: gdi:GDI1719 hypothetical protein
YP_002277840.1	PFAM: alpha/beta hydrolase fold; biotin/lipoyl attachment domain-containing protein; KEGG: gdi:GDI1720 putative pyruvate dehydrogenase E2 component
YP_002277841.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: gdi:GDI1721 putative pyruvate dehydrogenase E1 component subunit beta
YP_002277842.1	PFAM: dehydrogenase E1 component; KEGG: gdi:GDI1722 putative pyruvate dehydrogenase E1 component subunit alpha
YP_002277843.1	PFAM: helix-turn-helix Fis-type; GAF domain protein; KEGG: gdi:GDI1723 putative transcriptional regulator, fis family
YP_002277844.1	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway
YP_002277845.1	KEGG: gdi:GDI1725 putative phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_002277846.1	PFAM: protein of unknown function DUF465; KEGG: gdi:GDI1726 hypothetical protein
YP_002277847.1	PFAM: protein of unknown function DUF465; KEGG: gdi:GDI1727 hypothetical protein
YP_002277848.1	PFAM: protein of unknown function DUF1013; KEGG: gdi:GDI1728 hypothetical protein
YP_002277849.1	PFAM: heat shock protein Hsp20; KEGG: gdi:GDI1729 putative small heat shock protein IbpA
YP_002277850.1	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome
YP_002277851.1	TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: gdi:GDI1731 putative large-conductance mechanosensitive channel
YP_002277852.1	PFAM: amidohydrolase; Amidohydrolase 3; KEGG: gdi:GDI1732 putative guanine deaminase
YP_002277853.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI1733 acetoin(diacetyl) reductase
YP_002277854.1	KEGG: gdi:GDI1734 hypothetical protein
YP_002277855.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: gdi:GDI1736 hypothetical protein
YP_002277856.1	PFAM: oxidoreductase domain protein; KEGG: gdi:GDI1737 putative oxidoreductase
YP_002277857.1	PFAM: transcriptional coactivator/pterin dehydratase; KEGG: gdi:GDI1738 putative pterin-4-alpha-carbinolamine dehydratase
YP_002277858.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI1739 ABC transporter ATP-binding protein uup
YP_002277859.1	in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media
YP_002277860.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: gdi:GDI1742 putative RNA polymerase sigma-70 factor
YP_002277861.1	TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: gdi:GDI1743 putative RNA polymerase sigma-E factor (sigma-24)
YP_002277862.1	KEGG: gdi:GDI1744 hypothetical protein
YP_002277863.1	PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: gdi:GDI1745 putative signal transduction histidine kinase
YP_002277864.1	KEGG: gdi:GDI1746 putative transport ATP-binding protein CydD; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; SMART: AAA ATPase
YP_002277865.1	KEGG: gdi:GDI1747 putative transport ATP-binding protein CydC; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase
YP_002277866.1	KEGG: gdi:GDI1748 hypothetical protein
YP_002277867.1	KEGG: gdi:GDI1749 putative ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases
YP_002277868.1	PFAM: regulatory protein DeoR; KEGG: gdi:GDI1750 glycerol-3-phosphate regulon repressor
YP_002277869.1	in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane
YP_002277870.1	PFAM: major intrinsic protein; KEGG: gdi:GDI1752 putative glycerol uptake facilitator protein
YP_002277871.1	TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: gdi:GDI1753 putative glycerol kinase
YP_002277872.1	KEGG: gdi:GDI1754 hypothetical protein
YP_002277873.1	PFAM: ATP-cone domain protein; KEGG: gdi:GDI1755 putative transcriptional repressor NrdR
YP_002277874.1	TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: gdi:GDI1756 N utilization substance protein B homolog
YP_002277875.1	KEGG: gdi:GDI1757 putative thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein
YP_002277876.1	KEGG: gdi:GDI1758 hypothetical protein
YP_002277877.1	PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gdi:GDI1759 putative oxidoreductase
YP_002277878.1	KEGG: gdi:GDI1760 glucokinase; TIGRFAM: glucokinase; PFAM: Glucokinase
YP_002277879.1	PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: gdi:GDI1761 protein-L-isoaspartate O-methyltransferase
YP_002277880.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI1762 putative outer membrane protein TolC precursor
YP_002277881.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
YP_002277882.1	TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: gdi:GDI1764 peptide methionine sulfoxide reductase MsrA
YP_002277883.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI1765 putative nitrate transport ATP-binding protein
YP_002277884.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI1766 putative glycine betaine transport system permease protein
YP_002277885.1	catalyzes the formation of dUMP from dUTP
YP_002277886.1	TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: gdi:GDI1767 coenzyme A biosynthesis bifunctional protein coaBC
YP_002277887.1	TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: gdi:GDI1768 ubiquinone/menaquinone biosynthesis methyltransferase ubi
YP_002277888.1	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
YP_002277889.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
YP_002278340.1	PFAM: initiator RepB protein; KEGG: pde:Pden_5034 initiator RepB protein
YP_002278341.1	KEGG: met:M446_6984 hypothetical protein
YP_002278342.1	PFAM: WGR domain protein; KEGG: acr:Acry_3178 WGR domain protein
YP_002278343.1	KEGG: swi:Swit_5114 putative transcriptional regulator CopG/Arc/MetJ family
YP_002278344.1	TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: pla:Plav_1338 death-on-curing family protein
YP_002278345.1	KEGG: bid:Bind_3337 hypothetical protein
YP_002278346.1	KEGG: gdi:GDI2081 hypothetical protein
YP_002278347.1	KEGG: pfl:PFL_5371 lipoprotein, putative
YP_002278348.1	KEGG: gdi:GDI2082 hypothetical protein
YP_002278349.1	KEGG: hch:HCH_03194 uncharacterized protein with a C-terminal OMP (outer membrane protein) domain
YP_002278350.1	KEGG: spn:SP_1772 cell wall surface anchor family protein
YP_002278351.1	PFAM: transposase IS4 family protein; KEGG: gdi:GDI3822 putative transposase
YP_002278352.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: mlo:mlr0590 hypothetical protein
YP_002278353.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: gdi:GDI3498 putative secretion protein
YP_002278354.1	PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: gox:GOX0715 probable secretion ATP-binding protein
YP_002278355.1	KEGG: gox:GOX2697 hypothetical protein
YP_002278356.1	PFAM: PilT protein domain protein; KEGG: gox:GOX2696 plasmid stabilization protein
YP_002278357.1	KEGG: gdi:GDI3342 hypothetical protein
YP_002278358.1	MobA/MobL family protein
YP_002278359.1	KEGG: gox:GOX2712 hypothetical protein
YP_002278360.1	PFAM: Conjugal transfer TraD family protein; KEGG: gox:GOX2711 conjugal transfer protein, TraD
YP_002278361.1	PFAM: ROSMUCR transcriptional regulator; KEGG: gox:GOX2544 transcriptional regulator protein
YP_002278362.1	PFAM: PilT protein domain protein; KEGG: rpc:RPC_4151 PilT protein-like
YP_002278363.1	KEGG: rpc:RPC_4150 hypothetical protein
YP_002278364.1	PFAM: metallophosphoesterase; KEGG: met:M446_5193 metallophosphoesterase
YP_002278365.1	KEGG: pna:Pnap_4981 mucin-associated surface protein
YP_002278367.1	KEGG: gbe:GbCGDNIH1_1770 hypothetical protein
YP_002278368.1	KEGG: cak:Caul_0653 transcriptional regulator, XRE family