-- dump date 20250216_235748 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP028426.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP028426.1.REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr RobertoREFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal.REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yesREFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0xREFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBioREFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 39REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 39 CDSs (without protein) :: 39REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 39 CDSs (without protein) :: 39 Pseudo Genes (ambiguous residues) :: 0 of 39REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 39 CDSs (without protein) :: 39 Pseudo Genes (ambiguous residues) :: 0 of 39 Pseudo Genes (frameshifted) :: 13 of 39REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 39 CDSs (without protein) :: 39 Pseudo Genes (ambiguous residues) :: 0 of 39 Pseudo Genes (frameshifted) :: 13 of 39 Pseudo Genes (incomplete) :: 28 of 39REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 39 CDSs (without protein) :: 39 Pseudo Genes (ambiguous residues) :: 0 of 39 Pseudo Genes (frameshifted) :: 13 of 39 Pseudo Genes (incomplete) :: 28 of 39 Pseudo Genes (internal stop) :: 4 of 39REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 39 CDSs (without protein) :: 39 Pseudo Genes (ambiguous residues) :: 0 of 39 Pseudo Genes (frameshifted) :: 13 of 39 Pseudo Genes (incomplete) :: 28 of 39 Pseudo Genes (internal stop) :: 4 of 39 Pseudo Genes (multiple problems) :: 5 of 39REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 39 CDSs (without protein) :: 39 Pseudo Genes (ambiguous residues) :: 0 of 39 Pseudo Genes (frameshifted) :: 13 of 39 Pseudo Genes (incomplete) :: 28 of 39 Pseudo Genes (internal stop) :: 4 of 39 Pseudo Genes (multiple problems) :: 5 of 39 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP028426.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 39 CDSs (without protein) :: 39 Pseudo Genes (ambiguous residues) :: 0 of 39 Pseudo Genes (frameshifted) :: 13 of 39 Pseudo Genes (incomplete) :: 28 of 39 Pseudo Genes (internal stop) :: 4 of 39 Pseudo Genes (multiple problems) :: 5 of 39 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NZ_CP028427.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP028427.1.REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr RobertoREFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal.REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yesREFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0xREFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBioREFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 39REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 39 CDSs (without protein) :: 39REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 39 CDSs (without protein) :: 39 Pseudo Genes (ambiguous residues) :: 0 of 39REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 39 CDSs (without protein) :: 39 Pseudo Genes (ambiguous residues) :: 0 of 39 Pseudo Genes (frameshifted) :: 13 of 39REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 39 CDSs (without protein) :: 39 Pseudo Genes (ambiguous residues) :: 0 of 39 Pseudo Genes (frameshifted) :: 13 of 39 Pseudo Genes (incomplete) :: 28 of 39REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 39 CDSs (without protein) :: 39 Pseudo Genes (ambiguous residues) :: 0 of 39 Pseudo Genes (frameshifted) :: 13 of 39 Pseudo Genes (incomplete) :: 28 of 39 Pseudo Genes (internal stop) :: 4 of 39REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 39 CDSs (without protein) :: 39 Pseudo Genes (ambiguous residues) :: 0 of 39 Pseudo Genes (frameshifted) :: 13 of 39 Pseudo Genes (incomplete) :: 28 of 39 Pseudo Genes (internal stop) :: 4 of 39 Pseudo Genes (multiple problems) :: 5 of 39REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 39 CDSs (without protein) :: 39 Pseudo Genes (ambiguous residues) :: 0 of 39 Pseudo Genes (frameshifted) :: 13 of 39 Pseudo Genes (incomplete) :: 28 of 39 Pseudo Genes (internal stop) :: 4 of 39 Pseudo Genes (multiple problems) :: 5 of 39 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP028427.1. Bacteria and source DNA available from Olga Nunes, Rua Dr Roberto Frias, Portugal. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 31-SEP-2017 Assembly Method :: Celera Assembler v. 3 Expected Final Version :: yes Genome Coverage :: 300.0x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003010915.2-RS_2024_12_09 Annotation Date :: 12/09/2024 17:47:16 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,277 CDSs (total) :: 3,216 Genes (coding) :: 3,177 CDSs (with protein) :: 3,177 Genes (RNA) :: 61 rRNAs :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs :: 3, 3, 3 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 3 Pseudo Genes (total) :: 39 CDSs (without protein) :: 39 Pseudo Genes (ambiguous residues) :: 0 of 39 Pseudo Genes (frameshifted) :: 13 of 39 Pseudo Genes (incomplete) :: 28 of 39 Pseudo Genes (internal stop) :: 4 of 39 Pseudo Genes (multiple problems) :: 5 of 39 ##Genome-Annotation-Data-END## COMPLETENESS: full length.