-- dump date 20240506_004730 -- class Genbank::Contig -- table contig_comment -- id comment NC_015510.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP002691.1.REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at theREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: NetherlandsREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: SludgeREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release)REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: YesREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss)REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van VeenREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9 CRISPR Arrays :: 6REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002691.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_015511.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP002692.1.REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at theREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: NetherlandsREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: SludgeREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release)REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: YesREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss)REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van VeenREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9 CRISPR Arrays :: 6REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002692.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_015512.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP002693.1.REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at theREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: NetherlandsREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: SludgeREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release)REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: YesREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss)REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van VeenREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9 CRISPR Arrays :: 6REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002693.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length. NC_015513.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP002694.1.REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at theREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: NetherlandsREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: SludgeREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release)REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: YesREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss)REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van VeenREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/IlluminaREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9 CRISPR Arrays :: 6REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002694.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4087347 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Haliscomenobacter hydrossis O, DSM 1100 collection_date :: before 1973 lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Netherlands environment :: Sludge num_replicons :: 4 ref_biomaterial :: DSM 1100, ATCC 27775, LMG 10393 biotic_relationship :: Free living trophic_level :: Missing rel_to_oxygen :: Missing isol_growth_condt :: 124107 sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi04678 Type Strain :: Yes Funding Program :: DOE-GEBA 2009 Isolation Site :: sludge (activated sludge, Oss) Isolation Comments :: isolated by Van Veen Temperature Range :: Mesophile Diseases :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000212735.1-RS_2024_03_12 Annotation Date :: 03/12/2024 01:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 6,825 CDSs (total) :: 6,766 Genes (coding) :: 6,757 CDSs (with protein) :: 6,757 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 51 ncRNAs :: 2 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 7 of 9 Pseudo Genes (internal stop) :: 1 of 9 CRISPR Arrays :: 6 ##Genome-Annotation-Data-END## COMPLETENESS: full length.