-- dump date 20240506_044137 -- class Genbank::Contig -- table contig_comment -- id comment NZ_AP022843.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to AP022843.1.REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71xREFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; IlluminaREFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,798REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,798 CDSs (total) :: 3,716REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,798 CDSs (total) :: 3,716 Genes (coding) :: 3,644REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,798 CDSs (total) :: 3,716 Genes (coding) :: 3,644 CDSs (with protein) :: 3,644REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,798 CDSs (total) :: 3,716 Genes (coding) :: 3,644 CDSs (with protein) :: 3,644 Genes (RNA) :: 82REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,798 CDSs (total) :: 3,716 Genes (coding) :: 3,644 CDSs (with protein) :: 3,644 Genes (RNA) :: 82 rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,798 CDSs (total) :: 3,716 Genes (coding) :: 3,644 CDSs (with protein) :: 3,644 Genes (RNA) :: 82 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,798 CDSs (total) :: 3,716 Genes (coding) :: 3,644 CDSs (with protein) :: 3,644 Genes (RNA) :: 82 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 60REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,798 CDSs (total) :: 3,716 Genes (coding) :: 3,644 CDSs (with protein) :: 3,644 Genes (RNA) :: 82 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,798 CDSs (total) :: 3,716 Genes (coding) :: 3,644 CDSs (with protein) :: 3,644 Genes (RNA) :: 82 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 72REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,798 CDSs (total) :: 3,716 Genes (coding) :: 3,644 CDSs (with protein) :: 3,644 Genes (RNA) :: 82 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 72 CDSs (without protein) :: 72REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,798 CDSs (total) :: 3,716 Genes (coding) :: 3,644 CDSs (with protein) :: 3,644 Genes (RNA) :: 82 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 72 CDSs (without protein) :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,798 CDSs (total) :: 3,716 Genes (coding) :: 3,644 CDSs (with protein) :: 3,644 Genes (RNA) :: 82 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 72 CDSs (without protein) :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted) :: 40 of 72REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,798 CDSs (total) :: 3,716 Genes (coding) :: 3,644 CDSs (with protein) :: 3,644 Genes (RNA) :: 82 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 72 CDSs (without protein) :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted) :: 40 of 72 Pseudo Genes (incomplete) :: 34 of 72REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,798 CDSs (total) :: 3,716 Genes (coding) :: 3,644 CDSs (with protein) :: 3,644 Genes (RNA) :: 82 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 72 CDSs (without protein) :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted) :: 40 of 72 Pseudo Genes (incomplete) :: 34 of 72 Pseudo Genes (internal stop) :: 8 of 72REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,798 CDSs (total) :: 3,716 Genes (coding) :: 3,644 CDSs (with protein) :: 3,644 Genes (RNA) :: 82 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 72 CDSs (without protein) :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted) :: 40 of 72 Pseudo Genes (incomplete) :: 34 of 72 Pseudo Genes (internal stop) :: 8 of 72 Pseudo Genes (multiple problems) :: 7 of 72REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,798 CDSs (total) :: 3,716 Genes (coding) :: 3,644 CDSs (with protein) :: 3,644 Genes (RNA) :: 82 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 72 CDSs (without protein) :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted) :: 40 of 72 Pseudo Genes (incomplete) :: 34 of 72 Pseudo Genes (internal stop) :: 8 of 72 Pseudo Genes (multiple problems) :: 7 of 72 CRISPR Arrays :: 1REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,798 CDSs (total) :: 3,716 Genes (coding) :: 3,644 CDSs (with protein) :: 3,644 Genes (RNA) :: 82 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 72 CDSs (without protein) :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted) :: 40 of 72 Pseudo Genes (incomplete) :: 34 of 72 Pseudo Genes (internal stop) :: 8 of 72 Pseudo Genes (multiple problems) :: 7 of 72 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP022843.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated at DFAST https://dfast.nig.ac.jp/ ##Genome-Assembly-Data-START## Assembly Method :: Canu v. 1.8 Genome Coverage :: 71x Sequencing Technology :: Oxford Nanopore GridION; Illumina NextSeq500 ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/14/2024 01:32:38 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,798 CDSs (total) :: 3,716 Genes (coding) :: 3,644 CDSs (with protein) :: 3,644 Genes (RNA) :: 82 rRNAs :: 6, 6, 6 (5S, 16S, 23S) complete rRNAs :: 6, 6, 6 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 72 CDSs (without protein) :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted) :: 40 of 72 Pseudo Genes (incomplete) :: 34 of 72 Pseudo Genes (internal stop) :: 8 of 72 Pseudo Genes (multiple problems) :: 7 of 72 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## COMPLETENESS: full length.