-- dump date 20250216_235827 -- class Genbank::Contig -- table contig_comment -- id comment NZ_CP016027.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP016027.1.REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College ofREFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University ofREFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology.REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v.REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197XREFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific BiosciencesREFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,645REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,645 CDSs (total) :: 2,592REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,645 CDSs (total) :: 2,592 Genes (coding) :: 2,583REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,645 CDSs (total) :: 2,592 Genes (coding) :: 2,583 CDSs (with protein) :: 2,583REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,645 CDSs (total) :: 2,592 Genes (coding) :: 2,583 CDSs (with protein) :: 2,583 Genes (RNA) :: 53REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,645 CDSs (total) :: 2,592 Genes (coding) :: 2,583 CDSs (with protein) :: 2,583 Genes (RNA) :: 53 rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,645 CDSs (total) :: 2,592 Genes (coding) :: 2,583 CDSs (with protein) :: 2,583 Genes (RNA) :: 53 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,645 CDSs (total) :: 2,592 Genes (coding) :: 2,583 CDSs (with protein) :: 2,583 Genes (RNA) :: 53 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 43REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,645 CDSs (total) :: 2,592 Genes (coding) :: 2,583 CDSs (with protein) :: 2,583 Genes (RNA) :: 53 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 43 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,645 CDSs (total) :: 2,592 Genes (coding) :: 2,583 CDSs (with protein) :: 2,583 Genes (RNA) :: 53 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 43 ncRNAs :: 4 Pseudo Genes (total) :: 9REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,645 CDSs (total) :: 2,592 Genes (coding) :: 2,583 CDSs (with protein) :: 2,583 Genes (RNA) :: 53 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 43 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,645 CDSs (total) :: 2,592 Genes (coding) :: 2,583 CDSs (with protein) :: 2,583 Genes (RNA) :: 53 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 43 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,645 CDSs (total) :: 2,592 Genes (coding) :: 2,583 CDSs (with protein) :: 2,583 Genes (RNA) :: 53 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 43 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,645 CDSs (total) :: 2,592 Genes (coding) :: 2,583 CDSs (with protein) :: 2,583 Genes (RNA) :: 53 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 43 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 8 of 9REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,645 CDSs (total) :: 2,592 Genes (coding) :: 2,583 CDSs (with protein) :: 2,583 Genes (RNA) :: 53 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 43 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 8 of 9 Pseudo Genes (internal stop) :: 1 of 9REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,645 CDSs (total) :: 2,592 Genes (coding) :: 2,583 CDSs (with protein) :: 2,583 Genes (RNA) :: 53 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 43 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 8 of 9 Pseudo Genes (internal stop) :: 1 of 9 Pseudo Genes (multiple problems) :: 1 of 9REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,645 CDSs (total) :: 2,592 Genes (coding) :: 2,583 CDSs (with protein) :: 2,583 Genes (RNA) :: 53 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 43 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 8 of 9 Pseudo Genes (internal stop) :: 1 of 9 Pseudo Genes (multiple problems) :: 1 of 9 CRISPR Arrays :: 3REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,645 CDSs (total) :: 2,592 Genes (coding) :: 2,583 CDSs (with protein) :: 2,583 Genes (RNA) :: 53 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 43 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 8 of 9 Pseudo Genes (internal stop) :: 1 of 9 Pseudo Genes (multiple problems) :: 1 of 9 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP016027.1. Source DNA and bacterium available from Jianfei Luo, College of Bioscience and Bioengineering, South China University of Technology. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Assembly-Data-START## Assembly Method :: SOAP denovo v. 2.04; SMRT Analysis v. 2.2.0 Assembly Name :: Halothiobacillus sp. LS2 assembly v. 1.0 Genome Coverage :: 248X;197X Sequencing Technology :: Illumina; Pacific Biosciences ##Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001663815.1-RS_2024_12_09 Annotation Date :: 12/09/2024 15:07:20 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,645 CDSs (total) :: 2,592 Genes (coding) :: 2,583 CDSs (with protein) :: 2,583 Genes (RNA) :: 53 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 43 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 9 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 1 of 9 Pseudo Genes (incomplete) :: 8 of 9 Pseudo Genes (internal stop) :: 1 of 9 Pseudo Genes (multiple problems) :: 1 of 9 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## COMPLETENESS: full length.