-- dump date 20140619_112120 -- class Genbank::CDS -- table cds_note -- id note YP_006221934.1 COG0781 Transcription termination factor YP_006221935.1 COG0054 Riboflavin synthase beta-chain YP_006221936.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_006221937.1 COG0288 Carbonic anhydrase YP_006221938.1 COG0284 Orotidine-5'-phosphate decarboxylase YP_006221939.1 COG0414 Panthothenate synthetase YP_006221940.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_006221941.1 COG1432 Uncharacterized conserved protein YP_006221942.1 COG0443 Molecular chaperone YP_006221943.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_006221944.1 COG1420 Transcriptional regulator of heat shock gene YP_006221945.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_006221947.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_006221949.1 COG2952 Uncharacterized protein conserved in bacteria YP_006221950.1 COG0706 Preprotein translocase subunit YidC YP_006221954.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006221956.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_006221957.1 COG0013 Alanyl-tRNA synthetase YP_006221958.1 COG2841 Uncharacterized protein conserved in bacteria YP_006221960.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_006221961.1 COG1089 GDP-D-mannose dehydratase YP_006221962.1 COG0836 Mannose-1-phosphate guanylyltransferase YP_006221963.1 COG2948 Type IV secretory pathway, VirB10 components YP_006221964.1 COG3504 Type IV secretory pathway, VirB9 components YP_006221965.1 COG3736 Type IV secretory pathway, component VirB8 YP_006221969.1 COG0718 Uncharacterized protein conserved in bacteria YP_006221970.1 COG0853 Aspartate 1-decarboxylase YP_006221971.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_006221972.1 COG2127 Uncharacterized conserved protein YP_006221973.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_006221974.1 COG0132 Dethiobiotin synthetase YP_006221976.1 COG0538 Isocitrate dehydrogenases YP_006221978.1 COG0372 Citrate synthase YP_006221979.1 COG0671 Membrane-associated phospholipid phosphatase YP_006221980.1 COG0019 Diaminopimelate decarboxylase YP_006221981.1 COG0835 Chemotaxis signal transduction protein YP_006221982.1 COG0352 Thiamine monophosphate synthase YP_006221983.1 COG3014 Uncharacterized protein conserved in bacteria YP_006221987.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_006221988.1 COG0358 DNA primase (bacterial type) YP_006221989.1 COG0234 Co-chaperonin GroES (HSP10) YP_006221990.1 COG0459 Chaperonin GroEL (HSP60 family) YP_006221992.1 COG3041 Uncharacterized protein conserved in bacteria YP_006221993.1 COG0840 Methyl-accepting chemotaxis protein YP_006221994.1 COG2356 Endonuclease I YP_006221998.1 COG2011 ABC-type metal ion transport system, permease component YP_006221999.1 COG1135 ABC-type metal ion transport system, ATPase component YP_006222000.1 COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB YP_006222001.1 COG0307 Riboflavin synthase alpha chain YP_006222002.1 COG0084 Mg-dependent DNase YP_006222003.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_006222004.1 COG0797 Lipoproteins YP_006222005.1 COG1778 Low specificity phosphatase (HAD superfamily) YP_006222007.1 COG1934 Uncharacterized protein conserved in bacteria YP_006222008.1 COG0218 Predicted GTPase YP_006222010.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_006222011.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_006222012.1 COG0450 Peroxiredoxin YP_006222013.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_006222014.1 COG0772 Bacterial cell division membrane protein YP_006222015.1 COG1815 Flagellar basal body protein YP_006222016.1 COG1558 Flagellar basal body rod protein YP_006222017.1 COG1677 Flagellar hook-basal body protein YP_006222018.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_006222020.1 COG2990 Uncharacterized protein conserved in bacteria YP_006222021.1 COG2267 Lysophospholipase YP_006222022.1 COG2857 Cytochrome c1 YP_006222023.1 COG1290 Cytochrome b subunit of the bc complex YP_006222024.1 COG0723 Rieske Fe-S protein YP_006222025.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_006222026.1 COG1664 Integral membrane protein CcmA involved in cell shape determination YP_006222027.1 COG0739 Membrane proteins related to metalloendopeptidases YP_006222028.1 COG0739 Membrane proteins related to metalloendopeptidases YP_006222029.1 COG0285 Folylpolyglutamate synthase YP_006222031.1 COG0495 Leucyl-tRNA synthetase YP_006222033.1 COG0341 Preprotein translocase subunit SecF YP_006222034.1 COG0342 Preprotein translocase subunit SecD YP_006222035.1 COG1862 Preprotein translocase subunit YajC YP_006222036.1 COG3004 Na+/H+ antiporter YP_006222037.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_006222038.1 COG0052 Ribosomal protein S2 YP_006222039.1 COG0264 Translation elongation factor Ts YP_006222042.1 COG0500 SAM-dependent methyltransferases YP_006222043.1 COG3392 Adenine-specific DNA methylase YP_006222045.1 COG0203 Ribosomal protein L17 YP_006222046.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_006222047.1 COG0522 Ribosomal protein S4 and related proteins YP_006222048.1 COG0100 Ribosomal protein S11 YP_006222049.1 COG0099 Ribosomal protein S13 YP_006222050.1 COG0257 Ribosomal protein L36 YP_006222051.1 COG0361 Translation initiation factor 1 (IF-1) YP_006222052.1 COG0024 Methionine aminopeptidase YP_006222053.1 COG0201 Preprotein translocase subunit SecY YP_006222054.1 COG0200 Ribosomal protein L15 YP_006222055.1 COG0098 Ribosomal protein S5 YP_006222056.1 COG0256 Ribosomal protein L18 YP_006222057.1 COG0097 Ribosomal protein L6P/L9E YP_006222058.1 COG0096 Ribosomal protein S8 YP_006222059.1 COG0199 Ribosomal protein S14 YP_006222060.1 COG0094 Ribosomal protein L5 YP_006222061.1 COG0198 Ribosomal protein L24 YP_006222062.1 COG0093 Ribosomal protein L14 YP_006222063.1 COG0186 Ribosomal protein S17 YP_006222064.1 COG0255 Ribosomal protein L29 YP_006222065.1 COG0197 Ribosomal protein L16/L10E YP_006222066.1 COG0092 Ribosomal protein S3 YP_006222067.1 COG0091 Ribosomal protein L22 YP_006222068.1 COG0185 Ribosomal protein S19 YP_006222069.1 COG0090 Ribosomal protein L2 YP_006222070.1 COG0089 Ribosomal protein L23 YP_006222071.1 COG0088 Ribosomal protein L4 YP_006222072.1 COG0087 Ribosomal protein L3 YP_006222073.1 COG0051 Ribosomal protein S10 YP_006222074.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_006222077.1 COG0164 Ribonuclease HII YP_006222080.1 COG2337 Growth inhibitor YP_006222081.1 COG0114 Fumarase YP_006222083.1 COG1538 Outer membrane protein YP_006222084.1 COG0845 Membrane-fusion protein YP_006222085.1 COG3696 Putative silver efflux pump YP_006222086.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_006222087.1 COG0642 Signal transduction histidine kinase YP_006222088.1 COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance) YP_006222089.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) YP_006222090.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_006222092.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_006222094.1 COG2214 DnaJ-class molecular chaperone YP_006222095.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_006222096.1 COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain YP_006222097.1 COG0811 Biopolymer transport proteins YP_006222098.1 COG0848 Biopolymer transport protein YP_006222099.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_006222103.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_006222104.1 COG0598 Mg2+ and Co2+ transporters YP_006222105.1 COG0126 3-phosphoglycerate kinase YP_006222106.1 COG0166 Glucose-6-phosphate isomerase YP_006222107.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_006222108.1 COG0692 Uracil DNA glycosylase YP_006222109.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_006222111.1 COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain YP_006222112.1 COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component YP_006222113.1 COG0793 Periplasmic protease YP_006222114.1 COG0611 Thiamine monophosphate kinase YP_006222115.1 COG0157 Nicotinate-nucleotide pyrophosphorylase YP_006222116.1 COG0379 Quinolinate synthase YP_006222117.1 COG0688 Phosphatidylserine decarboxylase YP_006222120.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_006222121.1 COG2928 Uncharacterized conserved protein YP_006222122.1 COG0658 Predicted membrane metal-binding protein YP_006222123.1 COG0305 Replicative DNA helicase YP_006222124.1 COG0062 Uncharacterized conserved protein YP_006222126.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_006222127.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_006222129.1 COG0158 Fructose-1,6-bisphosphatase YP_006222130.1 COG0036 Pentose-5-phosphate-3-epimerase YP_006222131.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_006222133.1 COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP YP_006222134.1 COG0497 ATPase involved in DNA repair YP_006222135.1 COG0061 Predicted sugar kinase YP_006222138.1 COG1792 Cell shape-determining protein YP_006222139.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_006222140.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_006222141.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_006222142.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_006222143.1 COG1699 Uncharacterized protein conserved in bacteria YP_006222144.1 COG4105 DNA uptake lipoprotein YP_006222145.1 COG0466 ATP-dependent Lon protease, bacterial type YP_006222146.1 COG0287 Prephenate dehydrogenase YP_006222147.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_006222148.1 COG0419 ATPase involved in DNA repair YP_006222149.1 COG0419 ATPase involved in DNA repair YP_006222150.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_006222151.1 COG0281 Malic enzyme YP_006222152.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_006222153.1 COG4641 Uncharacterized protein conserved in bacteria YP_006222156.1 COG1106 Predicted ATPases YP_006222163.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006222164.1 COG1479 Uncharacterized conserved protein YP_006222166.1 COG4772 Outer membrane receptor for Fe3+-dicitrate YP_006222167.1 COG1064 Zn-dependent alcohol dehydrogenases YP_006222168.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_006222170.1 COG0077 Prephenate dehydratase YP_006222173.1 COG0338 Site-specific DNA methylase YP_006222174.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_006222176.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_006222177.1 COG4889 Predicted helicase YP_006222178.1 COG4889 Predicted helicase YP_006222179.1 COG1351 Predicted alternative thymidylate synthase YP_006222180.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_006222182.1 COG0813 Purine-nucleoside phosphorylase YP_006222184.1 COG0593 ATPase involved in DNA replication initiation YP_006222186.1 COG0708 Exonuclease III YP_006222189.1 COG1200 RecG-like helicase YP_006222191.1 COG0195 Transcription elongation factor YP_006222192.1 COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] YP_006222193.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_006222194.1 COG4206 Outer membrane cobalamin receptor protein YP_006222195.1 COG1539 Dihydroneopterin aldolase YP_006222196.1 COG0344 Predicted membrane protein YP_006222197.1 COG0348 Polyferredoxin YP_006222198.1 COG1748 Saccharopine dehydrogenase and related proteins YP_006222199.1 COG0786 Na+/glutamate symporter YP_006222200.1 COG0117 Pyrimidine deaminase YP_006222201.1 COG4123 Predicted O-methyltransferase YP_006222202.1 COG2217 Cation transport ATPase YP_006222203.1 COG3399 Uncharacterized protein conserved in bacteria YP_006222205.1 COG0338 Site-specific DNA methylase YP_006222208.1 COG0795 Predicted permeases YP_006222209.1 COG0193 Peptidyl-tRNA hydrolase YP_006222210.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_006222211.1 COG0176 Transaldolase YP_006222212.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_006222214.1 COG0694 Thioredoxin-like proteins and domains YP_006222215.1 COG0306 Phosphate/sulphate permeases YP_006222216.1 COG1253 Hemolysins and related proteins containing CBS domains YP_006222217.1 COG1538 Outer membrane protein YP_006222218.1 COG0845 Membrane-fusion protein YP_006222219.1 COG0842 ABC-type multidrug transport system, permease component YP_006222220.1 COG0842 ABC-type multidrug transport system, permease component YP_006222221.1 COG1739 Uncharacterized conserved protein YP_006222222.1 COG1981 Predicted membrane protein YP_006222223.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_006222224.1 COG1722 Exonuclease VII small subunit YP_006222225.1 COG0388 Predicted amidohydrolase YP_006222226.1 COG0172 Seryl-tRNA synthetase YP_006222227.1 COG0457 FOG: TPR repeat YP_006222228.1 COG0210 Superfamily I DNA and RNA helicases YP_006222229.1 COG1261 Flagellar basal body P-ring biosynthesis protein YP_006222230.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_006222231.1 COG0669 Phosphopantetheine adenylyltransferase YP_006222232.1 COG0125 Thymidylate kinase YP_006222234.1 COG3468 Type V secretory pathway, adhesin AidA YP_006222235.1 COG0502 Biotin synthase and related enzymes YP_006222236.1 COG1295 Predicted membrane protein YP_006222240.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_006222241.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_006222242.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_006222245.1 COG0732 Restriction endonuclease S subunits YP_006222246.1 COG1858 Cytochrome c peroxidase YP_006222247.1 COG0587 DNA polymerase III, alpha subunit YP_006222248.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_006222249.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_006222250.1 COG0486 Predicted GTPase YP_006222251.1 COG1847 Predicted RNA-binding protein YP_006222252.1 COG0706 Preprotein translocase subunit YidC YP_006222253.1 COG0759 Uncharacterized conserved protein YP_006222254.1 COG0594 RNase P protein component YP_006222255.1 COG0230 Ribosomal protein L34 YP_006222256.1 COG0848 Biopolymer transport protein YP_006222257.1 COG0811 Biopolymer transport proteins YP_006222258.1 COG0691 tmRNA-binding protein YP_006222259.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase YP_006222260.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_006222261.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_006222263.1 COG0477 Permeases of the major facilitator superfamily YP_006222268.1 COG3177 Uncharacterized conserved protein YP_006222271.1 COG0616 Periplasmic serine proteases (ClpP class) YP_006222272.1 COG0788 Formyltetrahydrofolate hydrolase YP_006222274.1 COG0731 Fe-S oxidoreductases YP_006222275.1 COG0550 Topoisomerase IA YP_006222276.1 COG1344 Flagellin and related hook-associated proteins YP_006222277.1 COG2604 Uncharacterized protein conserved in bacteria YP_006222280.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_006222281.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_006222282.1 COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain YP_006222283.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_006222288.1 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) YP_006222289.1 COG0060 Isoleucyl-tRNA synthetase YP_006222290.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_006222291.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_006222292.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_006222293.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_006222294.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_006222295.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_006222296.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_006222297.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_006222298.1 COG0780 Enzyme related to GTP cyclohydrolase I YP_006222304.1 COG0206 Cell division GTPase YP_006222305.1 COG1479 Uncharacterized conserved protein YP_006222307.1 COG0561 Predicted hydrolases of the HAD superfamily YP_006222310.1 COG0159 Tryptophan synthase alpha chain YP_006222311.1 COG0133 Tryptophan synthase beta chain YP_006222312.1 COG0134 Indole-3-glycerol phosphate synthase YP_006222313.1 COG0547 Anthranilate phosphoribosyltransferase YP_006222314.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_006222315.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_006222318.1 COG2503 Predicted secreted acid phosphatase YP_006222322.1 COG3201 Nicotinamide mononucleotide transporter YP_006222323.1 COG1564 Thiamine pyrophosphokinase YP_006222324.1 COG4278 Uncharacterized conserved protein YP_006222326.1 COG1109 Phosphomannomutase YP_006222327.1 COG0457 FOG: TPR repeat YP_006222328.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_006222329.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_006222330.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_006222331.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) YP_006222332.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_006222333.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_006222334.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_006222335.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_006222338.1 COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 YP_006222339.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_006222340.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases YP_006222341.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_006222342.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_006222343.1 COG0050 GTPases - translation elongation factors YP_006222344.1 COG0461 Orotate phosphoribosyltransferase YP_006222345.1 COG0233 Ribosome recycling factor YP_006222346.1 COG1314 Preprotein translocase subunit SecG YP_006222347.1 COG0500 SAM-dependent methyltransferases YP_006222348.1 COG0180 Tryptophanyl-tRNA synthetase YP_006222349.1 COG4174 ABC-type uncharacterized transport system, permease component YP_006222350.1 COG0150 Phosphoribosylaminoimidazole (AIR) synthetase YP_006222352.1 COG0169 Shikimate 5-dehydrogenase YP_006222353.1 COG0557 Exoribonuclease R YP_006222355.1 COG0360 Ribosomal protein S6 YP_006222356.1 COG0629 Single-stranded DNA-binding protein YP_006222357.1 COG0238 Ribosomal protein S18 YP_006222360.1 COG0309 Hydrogenase maturation factor YP_006222361.1 COG0068 Hydrogenase maturation factor YP_006222362.1 COG2957 Peptidylarginine deiminase and related enzymes YP_006222363.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_006222364.1 COG0863 DNA modification methylase YP_006222365.1 COG0270 Site-specific DNA methylase YP_006222366.1 COG0103 Ribosomal protein S9 YP_006222367.1 COG0102 Ribosomal protein L13 YP_006222369.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_006222371.1 COG0498 Threonine synthase YP_006222372.1 COG0840 Methyl-accepting chemotaxis protein YP_006222373.1 COG1636 Uncharacterized protein conserved in bacteria YP_006222374.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_006222375.1 COG2704 Anaerobic C4-dicarboxylate transporter YP_006222376.1 COG2812 DNA polymerase III, gamma/tau subunits YP_006222377.1 COG0802 Predicted ATPase or kinase YP_006222378.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_006222379.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_006222380.1 COG1896 Predicted hydrolases of HD superfamily YP_006222381.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_006222382.1 COG0775 Nucleoside phosphorylase YP_006222383.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_006222384.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_006222385.1 COG0579 Predicted dehydrogenase YP_006222390.1 COG0671 Membrane-associated phospholipid phosphatase YP_006222391.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_006222392.1 COG0854 Pyridoxal phosphate biosynthesis protein YP_006222393.1 COG1995 Pyridoxal phosphate biosynthesis protein YP_006222394.1 COG0591 Na+/proline symporter YP_006222395.1 COG0506 Proline dehydrogenase YP_006222397.1 COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit YP_006222400.1 COG0829 Urease accessory protein UreH YP_006222401.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_006222402.1 COG0830 Urease accessory protein UreF YP_006222403.1 COG2371 Urease accessory protein UreE YP_006222404.1 COG1138 Cytochrome c biogenesis factor YP_006222405.1 COG0804 Urea amidohydrolase (urease) alpha subunit YP_006222406.1 COG0831 Urea amidohydrolase (urease) gamma subunit YP_006222407.1 COG0597 Lipoprotein signal peptidase YP_006222408.1 COG1109 Phosphomannomutase YP_006222409.1 COG0268 Ribosomal protein S20 YP_006222410.1 COG0216 Protein chain release factor A YP_006222416.1 COG0031 Cysteine synthase YP_006222417.1 COG1045 Serine acetyltransferase YP_006222420.1 COG2217 Cation transport ATPase YP_006222422.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_006222424.1 COG0441 Threonyl-tRNA synthetase YP_006222425.1 COG0290 Translation initiation factor 3 (IF-3) YP_006222426.1 COG0291 Ribosomal protein L35 YP_006222427.1 COG0292 Ribosomal protein L20 YP_006222431.1 COG1760 L-serine deaminase YP_006222432.1 COG0814 Amino acid permeases YP_006222433.1 COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_006222436.1 COG0294 Dihydropteroate synthase and related enzymes YP_006222437.1 COG0470 ATPase involved in DNA replication YP_006222439.1 COG0527 Aspartokinases YP_006222440.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_006222441.1 COG2863 Cytochrome c553 YP_006222442.1 COG2863 Cytochrome c553 YP_006222443.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_006222444.1 COG0239 Integral membrane protein possibly involved in chromosome condensation YP_006222445.1 COG1587 Uroporphyrinogen-III synthase YP_006222446.1 COG0607 Rhodanese-related sulfurtransferase YP_006222447.1 COG0277 FAD/FMN-containing dehydrogenases YP_006222448.1 COG0020 Undecaprenyl pyrophosphate synthase YP_006222449.1 COG1131 ABC-type multidrug transport system, ATPase component YP_006222451.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_006222452.1 COG0582 Integrase YP_006222458.1 COG0305 Replicative DNA helicase YP_006222459.1 COG0358 DNA primase (bacterial type) YP_006222462.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_006222478.1 COG2184 Protein involved in cell division YP_006222482.1 COG3636 Predicted transcriptional regulator YP_006222483.1 COG3657 Uncharacterized protein conserved in bacteria YP_006222484.1 COG5410 Uncharacterized protein conserved in bacteria YP_006222488.1 COG3309 Uncharacterized virulence-associated protein D YP_006222491.1 COG5484 Uncharacterized conserved protein YP_006222494.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_006222495.1 COG2862 Predicted membrane protein YP_006222497.1 COG2107 Predicted periplasmic solute-binding protein YP_006222498.1 COG0468 RecA/RadA recombinase YP_006222499.1 COG0148 Enolase YP_006222502.1 COG0703 Shikimate kinase YP_006222505.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_006222506.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_006222507.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_006222508.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_006222509.1 COG0149 Triosephosphate isomerase YP_006222510.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_006222511.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_006222512.1 COG0192 S-adenosylmethionine synthetase YP_006222513.1 COG0105 Nucleoside diphosphate kinase YP_006222515.1 COG0333 Ribosomal protein L32 YP_006222516.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_006222517.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_006222520.1 COG0492 Thioredoxin reductase YP_006222521.1 COG3197 Uncharacterized protein, possibly involved in nitrogen fixation YP_006222522.1 COG0586 Uncharacterized membrane-associated protein YP_006222523.1 COG0716 Flavodoxins YP_006222524.1 COG0319 Predicted metal-dependent hydrolase YP_006222525.1 COG0345 Pyrroline-5-carboxylate reductase YP_006222530.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_006222531.1 COG1699 Uncharacterized protein conserved in bacteria YP_006222532.1 COG0525 Valyl-tRNA synthetase YP_006222533.1 COG0541 Signal recognition particle GTPase YP_006222534.1 COG0228 Ribosomal protein S16 YP_006222535.1 COG1837 Predicted RNA-binding protein (contains KH domain) YP_006222536.1 COG0806 RimM protein, required for 16S rRNA processing YP_006222537.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_006222538.1 COG0335 Ribosomal protein L19 YP_006222543.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_006222547.1 COG1112 Superfamily I DNA and RNA helicases and helicase subunits YP_006222548.1 COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH YP_006222550.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_006222551.1 COG0602 Organic radical activating enzymes YP_006222552.1 COG0151 Phosphoribosylamine-glycine ligase YP_006222554.1 COG1452 Organic solvent tolerance protein OstA YP_006222555.1 COG1926 Predicted phosphoribosyltransferases YP_006222556.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_006222558.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006222560.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_006222562.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_006222563.1 COG1966 Carbon starvation protein, predicted membrane protein YP_006222565.1 COG0726 Predicted xylanase/chitin deacetylase YP_006222566.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_006222567.1 COG0438 Glycosyltransferase YP_006222569.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_006222570.1 COG0477 Permeases of the major facilitator superfamily YP_006222572.1 COG3276 Selenocysteine-specific translation elongation factor YP_006222573.1 COG1787 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes YP_006222576.1 COG3376 High-affinity nickel permease YP_006222578.1 COG1106 Predicted ATPases YP_006222579.1 COG1787 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes YP_006222581.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_006222582.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006222583.1 COG2608 Copper chaperone YP_006222584.1 COG2608 Copper chaperone YP_006222585.1 COG2217 Cation transport ATPase YP_006222586.1 COG1183 Phosphatidylserine synthase YP_006222587.1 COG0465 ATP-dependent Zn proteases YP_006222588.1 COG2264 Ribosomal protein L11 methylase YP_006222589.1 COG0784 FOG: CheY-like receiver YP_006222593.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_006222594.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_006222595.1 COG0805 Sec-independent protein secretion pathway component TatC YP_006222596.1 COG1826 Sec-independent protein secretion pathway components YP_006222598.1 COG0338 Site-specific DNA methylase YP_006222599.1 COG3392 Adenine-specific DNA methylase YP_006222600.1 COG2255 Holliday junction resolvasome, helicase subunit YP_006222601.1 COG0413 Ketopantoate hydroxymethyltransferase YP_006222605.1 COG0739 Membrane proteins related to metalloendopeptidases YP_006222606.1 COG0850 Septum formation inhibitor YP_006222607.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_006222608.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_006222609.1 COG0083 Homoserine kinase YP_006222610.1 COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination YP_006222611.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_006222612.1 COG0858 Ribosome-binding factor A YP_006222613.1 COG0779 Uncharacterized protein conserved in bacteria YP_006222616.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_006222617.1 COG1408 Predicted phosphohydrolases YP_006222619.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_006222620.1 COG2404 Predicted phosphohydrolase (DHH superfamily) YP_006222621.1 COG1298 Flagellar biosynthesis pathway, component FlhA YP_006222622.1 COG0184 Ribosomal protein S15P/S13E YP_006222623.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_006222624.1 COG0757 3-dehydroquinate dehydratase II YP_006222625.1 COG0006 Xaa-Pro aminopeptidase YP_006222626.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_006222627.1 COG0466 ATP-dependent Lon protease, bacterial type YP_006222628.1 COG0455 ATPases involved in chromosome partitioning YP_006222629.1 COG1966 Carbon starvation protein, predicted membrane protein YP_006222630.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_006222631.1 COG1868 Flagellar motor switch protein YP_006222632.1 COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation YP_006222633.1 COG2731 Beta-galactosidase, beta subunit YP_006222634.1 COG4731 Uncharacterized protein conserved in bacteria YP_006222635.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_006222637.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase YP_006222638.1 COG0789 Predicted transcriptional regulators YP_006222639.1 COG2214 DnaJ-class molecular chaperone YP_006222641.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_006222642.1 COG0784 FOG: CheY-like receiver YP_006222643.1 COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase YP_006222644.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_006222645.1 COG0833 Amino acid transporters YP_006222646.1 COG0558 Phosphatidylglycerophosphate synthase YP_006222648.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_006222649.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_006222650.1 COG0612 Predicted Zn-dependent peptidases YP_006222651.1 COG0167 Dihydroorotate dehydrogenase YP_006222652.1 COG0855 Polyphosphate kinase YP_006222653.1 COG2604 Uncharacterized protein conserved in bacteria YP_006222654.1 COG2089 Sialic acid synthase YP_006222655.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_006222656.1 COG0815 Apolipoprotein N-acyltransferase YP_006222657.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_006222658.1 COG1190 Lysyl-tRNA synthetase (class II) YP_006222659.1 COG0112 Glycine/serine hydroxymethyltransferase YP_006222663.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_006222666.1 COG2202 FOG: PAS/PAC domain YP_006222667.1 COG0326 Molecular chaperone, HSP90 family YP_006222674.1 COG0489 ATPases involved in chromosome partitioning YP_006222675.1 COG4771 Outer membrane receptor for ferrienterochelin and colicins YP_006222676.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006222677.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_006222678.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_006222679.1 COG2829 Outer membrane phospholipase A YP_006222680.1 COG0733 Na+-dependent transporters of the SNF family YP_006222681.1 COG0733 Na+-dependent transporters of the SNF family YP_006222682.1 COG0824 Predicted thioesterase YP_006222684.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_006222685.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_006222687.1 COG0227 Ribosomal protein L28 YP_006222688.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_006222691.1 COG0742 N6-adenine-specific methylase YP_006222692.1 COG1580 Flagellar basal body-associated protein YP_006222693.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_006222696.1 COG4772 Outer membrane receptor for Fe3+-dicitrate YP_006222697.1 COG3440 Predicted restriction endonuclease YP_006222698.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_006222699.1 COG0477 Permeases of the major facilitator superfamily YP_006222700.1 COG1972 Nucleoside permease YP_006222701.1 COG1015 Phosphopentomutase YP_006222702.1 COG0813 Purine-nucleoside phosphorylase YP_006222703.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_006222706.1 COG1607 Acyl-CoA hydrolase YP_006222707.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_006222708.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_006222709.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_006222711.1 COG0215 Cysteinyl-tRNA synthetase YP_006222712.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_006222714.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_006222715.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_006222716.1 COG0753 Catalase YP_006222719.1 COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism YP_006222721.1 COG1106 Predicted ATPases YP_006222722.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_006222723.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_006222724.1 COG1981 Predicted membrane protein YP_006222725.1 COG1131 ABC-type multidrug transport system, ATPase component YP_006222727.1 COG0481 Membrane GTPase LepA YP_006222728.1 COG1154 Deoxyxylulose-5-phosphate synthase YP_006222729.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_006222730.1 COG1536 Flagellar motor switch protein YP_006222731.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein YP_006222732.1 COG0671 Membrane-associated phospholipid phosphatase YP_006222733.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_006222734.1 COG0608 Single-stranded DNA-specific exonuclease YP_006222735.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_006222737.1 COG3843 Type IV secretory pathway, VirD2 components (relaxase) YP_006222747.1 COG1192 ATPases involved in chromosome partitioning YP_006222750.1 COG0582 Integrase YP_006222751.1 COG0827 Adenine-specific DNA methylase YP_006222756.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_006222758.1 COG3505 Type IV secretory pathway, VirD4 components YP_006222765.1 COG0550 Topoisomerase IA YP_006222773.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_006222775.1 COG2948 Type IV secretory pathway, VirB10 components YP_006222776.1 COG3504 Type IV secretory pathway, VirB9 components YP_006222777.1 COG3736 Type IV secretory pathway, component VirB8 YP_006222779.1 COG3451 Type IV secretory pathway, VirB4 components YP_006222790.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_006222792.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_006222793.1 COG0818 Diacylglycerol kinase YP_006222795.1 COG3528 Uncharacterized protein conserved in bacteria YP_006222796.1 COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain YP_006222797.1 COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB YP_006222798.1 COG0370 Fe2+ transport system protein B YP_006222799.1 COG4772 Outer membrane receptor for Fe3+-dicitrate YP_006222802.1 COG4772 Outer membrane receptor for Fe3+-dicitrate YP_006222803.1 COG2352 Phosphoenolpyruvate carboxylase YP_006222804.1 COG0059 Ketol-acid reductoisomerase YP_006222805.1 COG2894 Septum formation inhibitor-activating ATPase YP_006222806.1 COG0851 Septum formation topological specificity factor YP_006222807.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_006222808.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_006222809.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_006222810.1 COG0732 Restriction endonuclease S subunits YP_006222813.1 COG4735 Uncharacterized protein conserved in bacteria YP_006222815.1 COG1360 Flagellar motor protein YP_006222816.1 COG1291 Flagellar motor component YP_006222817.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_006222818.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_006222819.1 COG1565 Uncharacterized conserved protein YP_006222820.1 COG3177 Uncharacterized conserved protein YP_006222821.1 COG3177 Uncharacterized conserved protein YP_006222826.1 COG0826 Collagenase and related proteases YP_006222828.1 COG1186 Protein chain release factor B YP_006222829.1 COG0438 Glycosyltransferase YP_006222830.1 COG0552 Signal recognition particle GTPase YP_006222832.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_006222833.1 COG1418 Predicted HD superfamily hydrolase YP_006222834.1 COG1573 Uracil-DNA glycosylase YP_006222835.1 COG1027 Aspartate ammonia-lyase YP_006222836.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_006222838.1 COG1210 UDP-glucose pyrophosphorylase YP_006222839.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_006222840.1 COG0762 Predicted integral membrane protein YP_006222841.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_006222842.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_006222843.1 COG0621 2-methylthioadenine synthetase YP_006222844.1 COG2236 Predicted phosphoribosyltransferases YP_006222845.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_006222846.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_006222847.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_006222848.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_006222849.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_006222850.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_006222851.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_006222852.1 COG0772 Bacterial cell division membrane protein YP_006222853.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_006222854.1 COG3401 Fibronectin type 3 domain-containing protein YP_006222855.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_006222856.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_006222857.1 COG2177 Cell division protein YP_006222858.1 COG0739 Membrane proteins related to metalloendopeptidases YP_006222859.1 COG1334 Uncharacterized flagellar protein FlaG YP_006222860.1 COG1345 Flagellar capping protein YP_006222861.1 COG1516 Flagellin-specific chaperone FliS YP_006222863.1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 YP_006222864.1 COG0388 Predicted amidohydrolase YP_006222865.1 COG2056 Predicted permease YP_006222866.1 COG0534 Na+-driven multidrug efflux pump YP_006222867.1 COG0486 Predicted GTPase YP_006222869.1 COG1333 ResB protein required for cytochrome c biosynthesis YP_006222870.1 COG2143 Thioredoxin-related protein YP_006222871.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_006222873.1 COG1385 Uncharacterized protein conserved in bacteria YP_006222877.1 COG0717 Deoxycytidine deaminase YP_006222878.1 COG0511 Biotin carboxyl carrier protein YP_006222879.1 COG0439 Biotin carboxylase YP_006222883.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_006222885.1 COG0863 DNA modification methylase YP_006222886.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_006222887.1 COG0785 Cytochrome c biogenesis protein YP_006222888.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_006222889.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_006222891.1 COG0621 2-methylthioadenine synthetase YP_006222892.1 COG2121 Uncharacterized protein conserved in bacteria YP_006222896.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_006222897.1 COG0457 FOG: TPR repeat YP_006222898.1 COG0134 Indole-3-glycerol phosphate synthase YP_006222899.1 COG1145 Ferredoxin YP_006222900.1 COG0248 Exopolyphosphatase YP_006222901.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_006222902.1 COG1560 Lauroyl/myristoyl acyltransferase YP_006222903.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_006222904.1 COG1749 Flagellar hook protein FlgE YP_006222905.1 COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) YP_006222907.1 COG0763 Lipid A disaccharide synthetase YP_006222908.1 COG0782 Transcription elongation factor YP_006222909.1 COG0756 dUTPase YP_006222912.1 COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor YP_006222913.1 COG2836 Uncharacterized conserved protein YP_006222914.1 COG0241 Histidinol phosphatase and related phosphatases YP_006222915.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_006222916.1 COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase YP_006222917.1 COG0279 Phosphoheptose isomerase YP_006222918.1 COG0863 DNA modification methylase YP_006222921.1 COG4786 Flagellar basal body rod protein YP_006222923.1 COG1193 Mismatch repair ATPase (MutS family) YP_006222925.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_006222926.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_006222928.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis YP_006222929.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_006222930.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006222932.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_006222933.1 COG1451 Predicted metal-dependent hydrolase YP_006222934.1 COG0359 Ribosomal protein L9 YP_006222935.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_006222936.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_006222937.1 COG1159 GTPase YP_006222938.1 COG3034 Uncharacterized protein conserved in bacteria YP_006222939.1 COG0796 Glutamate racemase YP_006222940.1 COG1158 Transcription termination factor YP_006222941.1 COG0254 Ribosomal protein L31 YP_006222942.1 COG0313 Predicted methyltransferases YP_006222943.1 COG0566 rRNA methylases YP_006222946.1 COG4748 Uncharacterized conserved protein YP_006222947.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_006222948.1 COG0696 Phosphoglyceromutase YP_006222950.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_006222951.1 COG1538 Outer membrane protein YP_006222952.1 COG0845 Membrane-fusion protein YP_006222953.1 COG3696 Putative silver efflux pump YP_006222956.1 COG0602 Organic radical activating enzymes YP_006222957.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_006222959.1 COG0496 Predicted acid phosphatase YP_006222960.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_006222961.1 COG0302 GTP cyclohydrolase I YP_006222962.1 COG0501 Zn-dependent protease with chaperone function YP_006222963.1 COG0585 Uncharacterized conserved protein YP_006222964.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_006222965.1 COG0289 Dihydrodipicolinate reductase YP_006222966.1 COG2189 Adenine specific DNA methylase Mod YP_006222967.1 COG2189 Adenine specific DNA methylase Mod YP_006222968.1 COG3587 Restriction endonuclease YP_006222969.1 COG1217 Predicted membrane GTPase involved in stress response YP_006222973.1 COG0673 Predicted dehydrogenases and related proteins YP_006222974.1 COG0209 Ribonucleotide reductase, alpha subunit YP_006222975.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_006222976.1 COG1338 Flagellar biosynthesis pathway, component FliP YP_006222977.1 COG0724 RNA-binding proteins (RRM domain) YP_006222978.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_006222979.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_006222980.1 COG2834 Outer membrane lipoprotein-sorting protein YP_006222982.1 COG1344 Flagellin and related hook-associated proteins YP_006222983.1 COG2231 Uncharacterized protein related to Endonuclease III YP_006222985.1 COG0407 Uroporphyrinogen-III decarboxylase YP_006222986.1 COG1538 Outer membrane protein YP_006222987.1 COG0845 Membrane-fusion protein YP_006222988.1 COG0841 Cation/multidrug efflux pump YP_006222994.1 COG0840 Methyl-accepting chemotaxis protein YP_006222995.1 COG2202 FOG: PAS/PAC domain YP_006222996.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_006222997.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_006222998.1 COG0178 Excinuclease ATPase subunit YP_006222999.1 COG0082 Chorismate synthase YP_006223000.1 COG0840 Methyl-accepting chemotaxis protein YP_006223001.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_006223003.1 COG0738 Fucose permease YP_006223004.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_006223005.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_006223006.1 COG0327 Uncharacterized conserved protein YP_006223007.1 COG1579 Zn-ribbon protein, possibly nucleic acid-binding YP_006223008.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_006223009.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_006223010.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_006223011.1 COG0778 Nitroreductase YP_006223013.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_006223014.1 COG3400 Uncharacterized protein conserved in bacteria YP_006223015.1 COG0337 3-dehydroquinate synthetase YP_006223016.1 COG0668 Small-conductance mechanosensitive channel YP_006223017.1 COG0621 2-methylthioadenine synthetase YP_006223018.1 COG0465 ATP-dependent Zn proteases YP_006223019.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_006223021.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_006223023.1 COG0019 Diaminopimelate decarboxylase YP_006223024.1 COG1605 Chorismate mutase YP_006223025.1 COG4866 Uncharacterized conserved protein YP_006223026.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_006223028.1 COG0582 Integrase YP_006223030.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_006223032.1 COG0247 Fe-S oxidoreductase YP_006223033.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_006223035.1 COG0082 Chorismate synthase YP_006223036.1 COG0571 dsRNA-specific ribonuclease YP_006223037.1 COG0328 Ribonuclease HI YP_006223038.1 COG2956 Predicted N-acetylglucosaminyl transferase YP_006223039.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_006223040.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_006223041.1 COG0612 Predicted Zn-dependent peptidases YP_006223042.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_006223043.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_006223044.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_006223047.1 COG0009 Putative translation factor (SUA5) YP_006223048.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_006223050.1 COG0670 Integral membrane protein, interacts with FtsH YP_006223051.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_006223052.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_006223053.1 COG0277 FAD/FMN-containing dehydrogenases YP_006223055.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_006223056.1 COG0739 Membrane proteins related to metalloendopeptidases YP_006223057.1 COG0709 Selenophosphate synthase YP_006223061.1 COG2217 Cation transport ATPase YP_006223062.1 COG0606 Predicted ATPase with chaperone activity YP_006223063.1 COG0242 N-formylmethionyl-tRNA deformylase YP_006223064.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_006223065.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_006223066.1 COG3062 Uncharacterized protein involved in formation of periplasmic nitrate reductase YP_006223067.1 COG0348 Polyferredoxin YP_006223068.1 COG1145 Ferredoxin YP_006223069.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_006223072.1 COG0315 Molybdenum cofactor biosynthesis enzyme YP_006223073.1 COG0521 Molybdopterin biosynthesis enzymes YP_006223074.1 COG0314 Molybdopterin converting factor, large subunit YP_006223075.1 COG1977 Molybdopterin converting factor, small subunit YP_006223076.1 COG0303 Molybdopterin biosynthesis enzyme YP_006223077.1 COG0807 GTP cyclohydrolase II YP_006223079.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_006223080.1 COG0725 ABC-type molybdate transport system, periplasmic component YP_006223081.1 COG4149 ABC-type molybdate transport system, permease component YP_006223082.1 COG1118 ABC-type sulfate/molybdate transport systems, ATPase component YP_006223083.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_006223085.1 COG1495 Disulfide bond formation protein DsbB YP_006223086.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_006223091.1 COG1609 Transcriptional regulators YP_006223094.1 COG1432 Uncharacterized conserved protein YP_006223095.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_006223096.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_006223097.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_006223099.1 COG1684 Flagellar biosynthesis pathway, component FliR YP_006223100.1 COG0303 Molybdopterin biosynthesis enzyme YP_006223101.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_006223103.1 COG0827 Adenine-specific DNA methylase YP_006223104.1 COG0171 NAD synthase YP_006223105.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_006223106.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_006223107.1 COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase YP_006223108.1 COG1083 CMP-N-acetylneuraminic acid synthetase YP_006223109.1 COG2063 Flagellar basal body L-ring protein YP_006223111.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_006223113.1 COG0194 Guanylate kinase YP_006223114.1 COG1826 Sec-independent protein secretion pathway components YP_006223115.1 COG0018 Arginyl-tRNA synthetase YP_006223116.1 COG0748 Putative heme iron utilization protein YP_006223119.1 COG1740 Ni,Fe-hydrogenase I small subunit YP_006223120.1 COG0374 Ni,Fe-hydrogenase I large subunit YP_006223121.1 COG1969 Ni,Fe-hydrogenase I cytochrome b subunit YP_006223122.1 COG0680 Ni,Fe-hydrogenase maturation factor YP_006223125.1 COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit YP_006223126.1 COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit YP_006223127.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit YP_006223128.1 COG1146 Ferredoxin YP_006223129.1 COG1559 Predicted periplasmic solute-binding protein YP_006223131.1 COG1918 Fe2+ transport system protein A YP_006223132.1 COG0177 Predicted EndoIII-related endonuclease YP_006223133.1 COG1886 Flagellar motor switch/type III secretory pathway protein YP_006223135.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_006223136.1 COG0418 Dihydroorotase YP_006223137.1 COG4692 Predicted neuraminidase (sialidase) YP_006223139.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_006223140.1 COG2603 Predicted ATPase YP_006223141.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_006223142.1 COG0681 Signal peptidase I YP_006223143.1 COG1994 Zn-dependent proteases YP_006223144.1 COG0698 Ribose 5-phosphate isomerase RpiB YP_006223146.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_006223147.1 COG0586 Uncharacterized membrane-associated protein YP_006223148.1 COG0260 Leucyl aminopeptidase YP_006223149.1 COG0012 Predicted GTPase, probable translation factor YP_006223151.1 COG0628 Predicted permease YP_006223152.1 COG0253 Diaminopimelate epimerase YP_006223153.1 COG3059 Predicted membrane protein YP_006223156.1 COG0828 Ribosomal protein S21 YP_006223157.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_006223158.1 COG0236 Acyl carrier protein YP_006223159.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_006223160.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_006223161.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_006223165.1 COG2855 Predicted membrane protein YP_006223166.1 COG1279 Lysine efflux permease YP_006223168.1 COG0042 tRNA-dihydrouridine synthase YP_006223170.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_006223171.1 COG0603 Predicted PP-loop superfamily ATPase YP_006223174.1 COG1576 Uncharacterized conserved protein YP_006223175.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_006223177.1 COG1546 Uncharacterized protein (competence- and mitomycin-induced) YP_006223178.1 COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog YP_006223179.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_006223181.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_006223182.1 COG0840 Methyl-accepting chemotaxis protein YP_006223183.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_006223184.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_006223186.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_006223187.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_006223189.1 COG1881 Phospholipid-binding protein YP_006223190.1 COG0492 Thioredoxin reductase YP_006223191.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_006223192.1 COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase YP_006223193.1 COG0460 Homoserine dehydrogenase YP_006223194.1 COG0322 Nuclease subunit of the excinuclease complex YP_006223197.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components YP_006223198.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_006223199.1 COG1145 Ferredoxin YP_006223202.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_006223203.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_006223204.1 COG0477 Permeases of the major facilitator superfamily YP_006223205.1 COG0437 Fe-S-cluster-containing hydrogenase components 1 YP_006223206.1 COG2864 Cytochrome b subunit of formate dehydrogenase YP_006223207.1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) YP_006223209.1 COG4889 Predicted helicase YP_006223210.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006223211.1 COG2010 Cytochrome c, mono- and diheme variants YP_006223212.1 COG0181 Porphobilinogen deaminase YP_006223213.1 COG0442 Prolyl-tRNA synthetase YP_006223214.1 COG0373 Glutamyl-tRNA reductase YP_006223215.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_006223218.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_006223219.1 COG0642 Signal transduction histidine kinase YP_006223221.1 COG1706 Flagellar basal-body P-ring protein YP_006223222.1 COG0513 Superfamily II DNA and RNA helicases YP_006223223.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_006223225.1 COG0730 Predicted permeases YP_006223226.1 COG0730 Predicted permeases YP_006223227.1 COG0221 Inorganic pyrophosphatase YP_006223229.1 COG0840 Methyl-accepting chemotaxis protein YP_006223230.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_006223231.1 COG0563 Adenylate kinase and related kinases YP_006223232.1 COG0173 Aspartyl-tRNA synthetase YP_006223233.1 COG0835 Chemotaxis signal transduction protein YP_006223234.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_006223235.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_006223239.1 COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family) YP_006223241.1 COG0754 Glutathionylspermidine synthase YP_006223243.1 COG1651 Protein-disulfide isomerase YP_006223244.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_006223245.1 COG0174 Glutamine synthetase YP_006223246.1 COG0422 Thiamine biosynthesis protein ThiC YP_006223250.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_006223252.1 COG1189 Predicted rRNA methylase YP_006223253.1 COG0196 FAD synthase YP_006223254.1 COG0021 Transketolase YP_006223255.1 COG3893 Inactivated superfamily I helicase YP_006223256.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_006223260.1 COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain YP_006223261.1 COG0631 Serine/threonine protein phosphatase YP_006223262.1 COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains YP_006223263.1 COG0515 Serine/threonine protein kinase YP_006223264.1 COG1131 ABC-type multidrug transport system, ATPase component YP_006223265.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_006223266.1 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A YP_006223267.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_006223268.1 COG1049 Aconitase B YP_006223269.1 COG1427 Predicted periplasmic solute-binding protein YP_006223273.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_006223274.1 COG2070 Dioxygenases related to 2-nitropropane dioxygenase YP_006223275.1 COG0162 Tyrosyl-tRNA synthetase YP_006223276.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_006223277.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_006223278.1 COG0528 Uridylate kinase YP_006223279.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_006223280.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_006223281.1 COG0849 Actin-like ATPase involved in cell division YP_006223282.1 COG0206 Cell division GTPase YP_006223285.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006223286.1 COG0405 Gamma-glutamyltransferase YP_006223287.1 COG1112 Superfamily I DNA and RNA helicases and helicase subunits YP_006223288.1 COG1112 Superfamily I DNA and RNA helicases and helicase subunits YP_006223290.1 COG1066 Predicted ATP-dependent serine protease YP_006223291.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_006223292.1 COG1611 Predicted Rossmann fold nucleotide-binding protein YP_006223293.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_006223294.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_006223295.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_006223296.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_006223297.1 COG2890 Methylase of polypeptide chain release factors YP_006223298.1 COG0501 Zn-dependent protease with chaperone function YP_006223304.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_006223305.1 COG0575 CDP-diglyceride synthetase YP_006223306.1 COG0471 Di- and tricarboxylate transporters YP_006223307.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_006223308.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_006223314.1 COG1353 Predicted hydrolase of the HD superfamily (permuted catalytic motifs) YP_006223316.1 COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) YP_006223318.1 COG1332 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) YP_006223327.1 COG1343 Uncharacterized protein predicted to be involved in DNA repair YP_006223328.1 COG1518 Uncharacterized protein predicted to be involved in DNA repair YP_006223329.1 COG0352 Thiamine monophosphate synthase YP_006223330.1 COG0356 F0F1-type ATP synthase, subunit a YP_006223331.1 COG0516 IMP dehydrogenase/GMP reductase YP_006223332.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_006223333.1 COG0237 Dephospho-CoA kinase YP_006223334.1 COG0421 Spermidine synthase YP_006223336.1 COG1160 Predicted GTPases YP_006223337.1 COG0776 Bacterial nucleoid DNA-binding protein YP_006223338.1 COG3018 Uncharacterized protein conserved in bacteria YP_006223340.1 COG2067 Long-chain fatty acid transport protein YP_006223341.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_006223342.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_006223347.1 COG1083 CMP-N-acetylneuraminic acid synthetase YP_006223348.1 COG0381 UDP-N-acetylglucosamine 2-epimerase YP_006223349.1 COG2089 Sialic acid synthase YP_006223350.1 COG0217 Uncharacterized conserved protein YP_006223351.1 COG0113 Delta-aminolevulinic acid dehydratase YP_006223352.1 COG1242 Predicted Fe-S oxidoreductase YP_006223353.1 COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase YP_006223354.1 COG0642 Signal transduction histidine kinase YP_006223355.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_006223357.1 COG0457 FOG: TPR repeat YP_006223359.1 COG0475 Kef-type K+ transport systems, membrane components YP_006223360.1 COG1164 Oligoendopeptidase F YP_006223362.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_006223365.1 COG0477 Permeases of the major facilitator superfamily YP_006223368.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_006223369.1 COG0409 Hydrogenase maturation factor YP_006223370.1 COG0298 Hydrogenase maturation factor YP_006223371.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_006223372.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_006223373.1 COG0282 Acetate kinase YP_006223374.1 COG0857 BioD-like N-terminal domain of phosphotransacetylase YP_006223376.1 COG1843 Flagellar hook capping protein YP_006223377.1 COG1749 Flagellar hook protein FlgE YP_006223378.1 COG0827 Adenine-specific DNA methylase YP_006223379.1 COG0210 Superfamily I DNA and RNA helicases YP_006223381.1 COG1757 Na+/H+ antiporter YP_006223382.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_006223383.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_006223384.1 COG1115 Na+/alanine symporter YP_006223385.1 COG0787 Alanine racemase YP_006223386.1 COG3677 Transposase and inactivated derivatives YP_006223387.1 COG1002 Type II restriction enzyme, methylase subunits YP_006223391.1 COG1166 Arginine decarboxylase (spermidine biosynthesis) YP_006223392.1 COG0438 Glycosyltransferase YP_006223393.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_006223394.1 COG0500 SAM-dependent methyltransferases YP_006223396.1 COG0143 Methionyl-tRNA synthetase YP_006223397.1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases YP_006223398.1 COG0668 Small-conductance mechanosensitive channel YP_006223399.1 COG0475 Kef-type K+ transport systems, membrane components YP_006223400.1 COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN YP_006223401.1 COG0534 Na+-driven multidrug efflux pump YP_006223402.1 COG3338 Carbonic anhydrase YP_006223405.1 COG0732 Restriction endonuclease S subunits YP_006223406.1 COG2897 Rhodanese-related sulfurtransferase YP_006223407.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_006223408.1 COG0124 Histidyl-tRNA synthetase YP_006223409.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_006223410.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_006223414.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006223415.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006223416.1 COG0225 Peptide methionine sulfoxide reductase YP_006223417.1 COG0560 Phosphoserine phosphatase YP_006223418.1 COG1528 Ferritin-like protein YP_006223419.1 COG1740 Ni,Fe-hydrogenase I small subunit YP_006223420.1 COG1344 Flagellin and related hook-associated proteins YP_006223423.1 COG0500 SAM-dependent methyltransferases YP_006223424.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_006223425.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_006223431.1 COG0500 SAM-dependent methyltransferases YP_006223433.1 COG2022 Uncharacterized enzyme of thiazole biosynthesis YP_006223434.1 COG0605 Superoxide dismutase YP_006223435.1 COG0500 SAM-dependent methyltransferases YP_006223437.1 COG1087 UDP-glucose 4-epimerase YP_006223438.1 COG0101 Pseudouridylate synthase YP_006223439.1 COG0795 Predicted permeases YP_006223440.1 COG2518 Protein-L-isoaspartate carboxylmethyltransferase YP_006223441.1 COG0208 Ribonucleotide reductase, beta subunit YP_006223442.1 COG1570 Exonuclease VII, large subunit YP_006223443.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_006223444.1 COG3334 Uncharacterized conserved protein YP_006223445.1 COG0513 Superfamily II DNA and RNA helicases YP_006223446.1 COG0104 Adenylosuccinate synthase YP_006223451.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_006223452.1 COG4239 ABC-type uncharacterized transport system, permease component YP_006223453.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_006223455.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_006223457.1 COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit YP_006223458.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_006223460.1 COG0520 Selenocysteine lyase YP_006223461.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_006223462.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_006223463.1 COG0073 EMAP domain YP_006223464.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_006223465.1 COG0761 Penicillin tolerance protein YP_006223466.1 COG0539 Ribosomal protein S1 YP_006223468.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_006223469.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_006223470.1 COG0325 Predicted enzyme with a TIM-barrel fold YP_006223471.1 COG2104 Sulfur transfer protein involved in thiamine biosynthesis YP_006223472.1 COG2908 Uncharacterized protein conserved in bacteria YP_006223473.1 COG0835 Chemotaxis signal transduction protein YP_006223474.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_006223475.1 COG0835 Chemotaxis signal transduction protein YP_006223476.1 COG0831 Urea amidohydrolase (urease) gamma subunit YP_006223477.1 COG0804 Urea amidohydrolase (urease) alpha subunit YP_006223479.1 COG2252 Permeases YP_006223480.1 COG0738 Fucose permease YP_006223482.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_006223483.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_006223484.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_006223485.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_006223486.1 COG0837 Glucokinase YP_006223487.1 COG0477 Permeases of the major facilitator superfamily YP_006223488.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006223489.1 COG0166 Glucose-6-phosphate isomerase YP_006223490.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_006223492.1 COG0270 Site-specific DNA methylase YP_006223493.1 COG1401 GTPase subunit of restriction endonuclease YP_006223500.1 COG3451 Type IV secretory pathway, VirB4 components YP_006223502.1 COG3736 Type IV secretory pathway, component VirB8 YP_006223503.1 COG3504 Type IV secretory pathway, VirB9 components YP_006223504.1 COG2948 Type IV secretory pathway, VirB10 components YP_006223508.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_006223510.1 COG3505 Type IV secretory pathway, VirD4 components YP_006223511.1 COG0827 Adenine-specific DNA methylase YP_006223520.1 COG0550 Topoisomerase IA YP_006223525.1 COG1192 ATPases involved in chromosome partitioning YP_006223538.1 COG0582 Integrase YP_006223539.1 COG3843 Type IV secretory pathway, VirD2 components (relaxase) YP_006223541.1 COG0536 Predicted GTPase YP_006223542.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_006223543.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_006223544.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_006223545.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_006223546.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_006223547.1 COG0211 Ribosomal protein L27 YP_006223548.1 COG0261 Ribosomal protein L21 YP_006223552.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006223553.1 COG2189 Adenine specific DNA methylase Mod YP_006223554.1 COG3421 Uncharacterized protein conserved in bacteria YP_006223555.1 COG1256 Flagellar hook-associated protein YP_006223560.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_006223562.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_006223563.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_006223565.1 COG0848 Biopolymer transport protein YP_006223566.1 COG0811 Biopolymer transport proteins YP_006223567.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_006223568.1 COG0055 F0F1-type ATP synthase, beta subunit YP_006223569.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_006223570.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_006223573.1 COG0711 F0F1-type ATP synthase, subunit b YP_006223574.1 COG1475 Predicted transcriptional regulators YP_006223575.1 COG1192 ATPases involved in chromosome partitioning YP_006223576.1 COG0340 Biotin-(acetyl-CoA carboxylase) ligase YP_006223577.1 COG0223 Methionyl-tRNA formyltransferase YP_006223578.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_006223579.1 COG0732 Restriction endonuclease S subunits YP_006223581.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_006223582.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_006223583.1 COG0765 ABC-type amino acid transport system, permease component YP_006223584.1 COG0765 ABC-type amino acid transport system, permease component YP_006223585.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_006223586.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_006223587.1 COG1479 Uncharacterized conserved protein YP_006223588.1 COG1479 Uncharacterized conserved protein YP_006223591.1 COG0480 Translation elongation factors (GTPases) YP_006223592.1 COG0049 Ribosomal protein S7 YP_006223593.1 COG0048 Ribosomal protein S12 YP_006223594.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_006223595.1 COG0222 Ribosomal protein L7/L12 YP_006223596.1 COG0244 Ribosomal protein L10 YP_006223597.1 COG0081 Ribosomal protein L1 YP_006223598.1 COG0080 Ribosomal protein L11 YP_006223599.1 COG0250 Transcription antiterminator YP_006223601.1 COG0267 Ribosomal protein L33 YP_006223602.1 COG0050 GTPases - translation elongation factors YP_006223603.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_006223604.1 COG0546 Predicted phosphatases YP_006223606.1 COG0419 ATPase involved in DNA repair YP_006223607.1 COG4487 Uncharacterized protein conserved in bacteria YP_006223608.1 COG0827 Adenine-specific DNA methylase YP_006223610.1 COG0556 Helicase subunit of the DNA excision repair complex YP_006223613.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_006223614.1 COG3043 Nitrate reductase cytochrome c-type subunit YP_006223615.1 COG1064 Zn-dependent alcohol dehydrogenases YP_006223618.1 COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit YP_006223619.1 COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit YP_006223620.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit YP_006223621.1 COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit YP_006223622.1 COG0015 Adenylosuccinate lyase YP_006223624.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_006223625.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_006223628.1 COG0419 ATPase involved in DNA repair YP_006223630.1 COG1076 DnaJ-domain-containing proteins 1 YP_006223635.1 COG2010 Cytochrome c, mono- and diheme variants YP_006223637.1 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit YP_006223638.1 COG3278 Cbb3-type cytochrome oxidase, subunit 1 YP_006223639.1 COG1194 A/G-specific DNA glycosylase YP_006223640.1 COG1620 L-lactate permease YP_006223641.1 COG0247 Fe-S oxidoreductase YP_006223642.1 COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain YP_006223643.1 COG1556 Uncharacterized conserved protein YP_006223644.1 COG1225 Peroxiredoxin YP_006223646.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_006223647.1 COG0840 Methyl-accepting chemotaxis protein YP_006223648.1 COG4786 Flagellar basal body rod protein YP_006223650.1 COG4735 Uncharacterized protein conserved in bacteria YP_006223652.1 COG5527 Protein involved in initiation of plasmid replication YP_006223654.1 COG3041 Uncharacterized protein conserved in bacteria YP_006223657.1 COG3041 Uncharacterized protein conserved in bacteria YP_006223658.1 COG5527 Protein involved in initiation of plasmid replication YP_006223660.1 COG5527 Protein involved in initiation of plasmid replication YP_006223663.1 COG1196 Chromosome segregation ATPases YP_006223664.1 COG5655 Plasmid rolling circle replication initiator protein and truncated derivatives