-- dump date 20140619_112618 -- class Genbank::CDS -- table cds_note -- id note NP_206803.1 Regulates rRNA biosynthesis by transcriptional antitermination NP_206804.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not NP_206805.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis NP_206806.1 similar to SP:P27134 PID:154523 percent identity: 33.33; identified by sequence similarity NP_206807.1 OMP decarboxylase; OMPDCase; OMPdecase; type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase NP_206808.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine NP_206812.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth NP_206813.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring NP_206814.1 synthesizes RNA primers at the replication forks NP_206815.1 hypothetical protein; identified by GeneMark NP_206816.1 hypothetical protein; identified by GeneMark NP_206817.1 hypothetical protein; identified by GeneMark NP_206818.1 hypothetical protein; identified by GeneMark NP_206819.1 similar to SP:P17794 PID:154786 PID:39156 percent identity: 25.23; identified by sequence similarity NP_206820.1 hypothetical protein; identified by GeneMark NP_206821.1 similar to SP:P37599 GB:U05345 GB:Z29584 PID:453378 PID:580837 percent identity: 26.80; identified by sequence similarity NP_206822.1 similar to GP:1652682 percent identity: 45.62; identified by sequence similarity NP_206823.1 inner membrane enzyme; removes 1-phosphate groups from a number of lipid A precursors which provides a point of attachment for to moieties such as phosphoethanolamine which is attached by HP0022 NP_206824.1 attaches phosphoethanolamine to lipid A at the 1 position of the disaccharide backbone in contrast to other gram-negative bacteria NP_206826.1 hypothetical protein; identified by GeneMark NP_206827.1 similar to GB:AE000511 PID:2313112 percent identity: 100.00; identified by sequence similarity NP_206828.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH NP_206829.1 similar to GB:J02799 SP:P08200 PID:146432 GB:U00096 PID:1651560 percent identity: 70.73; identified by sequence similarity NP_206830.1 similar to GB:L42023 SP:P43999 PID:1003790 PID:1222385 PID:1204703 percent identity: 42.07; identified by sequence similarity NP_206831.1 similar to GB:L77117 PID:1591937 percent identity: 36.00; identified by sequence similarity NP_206832.1 hypothetical protein; identified by GeneMark NP_206833.1 hypothetical protein; identified by GeneMark NP_206834.1 similar to GP:1787108 percent identity: 37.04; identified by sequence similarity NP_206835.1 similar to GB:M31045 SP:P15716 PID:145549 PID:499142 GB:U00096 percent identity: 40.46; identified by sequence similarity NP_206836.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5) NP_206837.1 similar to GB:M38777 SP:P17577 GB:X04487 PID:145298 PID:43322 percent identity: 34.15; identified by sequence similarity NP_206838.1 hypothetical protein; identified by GeneMark NP_206839.1 similar to GP:343539 percent identity: 19.41; identified by sequence similarity NP_206840.1 hypothetical protein; identified by GeneMark NP_206844.1 similar to PIR:A25638 percent identity: 42.83; identified by sequence similarity NP_206845.1 similar to PID:1002383 SP:Q56598 PID:1002384 PID:2244681 percent identity: 62.07; identified by sequence similarity NP_206846.1 similar to SP:P33217 GB:S51942 PID:262671 percent identity: 44.26; identified by sequence similarity NP_206848.1 similar to SP:P26412 percent identity: 39.70; identified by sequence similarity NP_206849.1 similar to GB:Z15087 SP:Q02987 PID:46050 percent identity: 34.47; identified by sequence similarity NP_206850.1 hypothetical protein; identified by GeneMark NP_206851.1 similar to SP:P09358 GB:S56948 PID:153610 percent identity: 37.02; identified by sequence similarity NP_206852.1 similar to SP:P05302 percent identity: 38.97; identified by sequence similarity NP_206853.1 hypothetical protein; identified by GeneMark NP_206854.1 hypothetical protein; identified by GeneMark NP_206855.1 similar to SP:P25282 GB:D17388 GB:D90363 PID:216711 PID:435623 percent identity: 32.12; identified by sequence similarity NP_206856.1 similar to GP:1787251 percent identity: 51.35; identified by sequence similarity NP_206857.1 similar to GP:1653455 percent identity: 32.22; identified by sequence similarity NP_206858.1 hypothetical protein; identified by GeneMark NP_206859.1 hypothetical protein; identified by GeneMark NP_206860.1 hypothetical protein; identified by GeneMark NP_206861.1 hypothetical protein; identified by GeneMark NP_206862.1 hypothetical protein; identified by GeneMark NP_206863.1 hypothetical protein; identified by GeneMark NP_206864.1 hypothetical protein; identified by GeneMark NP_206865.1 hypothetical protein; identified by GeneMark NP_206866.1 similar to GP:1665846 percent identity: 34.66; identified by sequence similarity NP_206867.1 similar to GB:M84338 SP:Q09067 PID:485336 PID:1247672 GB:AE000511 percent identity: 100.00; identified by sequence similarity NP_206868.1 similar to GB:M84338 SP:Q09066 PID:485335 PID:1247672 GB:AE000511 percent identity: 100.00; identified by sequence similarity NP_206869.1 similar to GB:M84338 SP:Q09065 PID:485334 PID:1247672 GB:AE000511 percent identity: 100.00; identified by sequence similarity NP_206870.1 involved in the assembly of the urease metallocenter; possible nickel donor NP_206871.1 similar to GB:M84338 SP:Q09068 PID:485332 PID:1247672 GB:AE000511 percent identity: 100.00; identified by sequence similarity NP_206872.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureA(alpha) and 3 ureB (beta) subunits NP_206873.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureA(alpha) and 3 ureB (beta) subunits NP_206874.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis NP_206875.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate NP_206876.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase NP_206877.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 NP_206878.1 hypothetical protein; identified by GeneMark NP_206879.1 similar to GB:AE000511 PID:2313160 percent identity: 100.00; identified by sequence similarity NP_206880.1 hypothetical protein; identified by GeneMark NP_206881.1 hypothetical protein; identified by GeneMark NP_206882.1 similar to GB:Z34005 SP:P39209 GB:D30762 PID:496484 PID:710635 percent identity: 27.96; identified by sequence similarity NP_206883.1 forms a direct contact with the tRNA during translation NP_206884.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit NP_206885.1 hypothetical protein; identified by GeneMark NP_206886.1 similar to SP:P33940 PID:424051 GB:U00096 percent identity: 28.15; identified by sequence similarity NP_206887.1 hypothetical protein; identified by GeneMark NP_206888.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria NP_206889.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine NP_206890.1 similar to GB:L42023 SP:P43712 PID:1003213 PID:1222070 PID:1204413 percent identity: 35.39; identified by sequence similarity NP_206891.1 similar to GB:D13968 SP:P34719 PID:303629 percent identity: 50.74; identified by sequence similarity NP_206892.1 similar to GB:D13968 SP:P34721 PID:303630 percent identity: 55.30; identified by sequence similarity NP_206895.1 hypothetical protein; identified by GeneMark NP_206896.1 Involved in the metabolism of aromatic amino acids NP_206897.1 hypothetical protein; identified by GeneMark NP_206898.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine NP_206899.1 similar to GB:L29189 SP:P39216 PID:459689 GB:AL009126 percent identity: 32.81; identified by sequence similarity NP_206900.1 similar to GB:L42023 SP:P44068 PID:1005965 PID:1220985 PID:1205129 percent identity: 32.02; identified by sequence similarity NP_206901.1 hypothetical protein; identified by GeneMark NP_206902.1 similar to PID:1197639 PID:1197649 percent identity: 29.26; identified by sequence similarity NP_206903.1 similar to GB:L29189 SP:P39217 PID:459691 GB:AL009126 percent identity: 30.71; identified by sequence similarity NP_206904.1 similar to GB:L42023 SP:P44764 PID:1004048 PID:1220657 PID:1204834 percent identity: 31.83; identified by sequence similarity NP_206905.2 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2 NP_206906.1 catalyzes the formation of L-cystathionine from O-succinyl-L-homoserine and L-cysteine; or Cystathionine beta-lyase (CBL) can convert cystathionine to homocysteine NP_206907.1 similar to GB:D26185 SP:P37887 PID:467462 GB:AL009126 percent identity: 45.72; identified by sequence similarity NP_206908.1 hypothetical protein; identified by GeneMark NP_206909.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria NP_206910.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor NP_206911.1 Acts as a negative regulator of the grpE-dnaK-dnaJ and groELS class I heat shock operons by preventing heat-shock induction NP_206912.1 hypothetical protein; identified by GeneMark NP_206913.1 hypothetical protein; identified by GeneMark NP_206914.1 hypothetical protein; identified by GeneMark NP_206915.1 FlaB; structural flagella protein; in Helicobacter flagella are composed of flagellin A and flagellin B; the amounts of each seem to be controlled by environmental conditions NP_206916.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity NP_206917.1 similar to GB:L77117 SP:Q58708 PID:1591951 percent identity: 34.23; identified by sequence similarity NP_206918.1 hypothetical protein; identified by GeneMark NP_206919.1 hypothetical protein; identified by GeneMark NP_206920.1 hypothetical protein; identified by GeneMark NP_206921.1 catalyzes the formation of phosphoenolpyruvate from pyruvate NP_206922.1 hypothetical protein; identified by GeneMark NP_206923.1 catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_206924.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits NP_206925.1 similar to PID:1171433 SP:P52830 percent identity: 50.82; identified by sequence similarity NP_206926.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit NP_206927.1 similar to GB:AE000511 PID:2313212 percent identity: 100.00; identified by sequence similarity NP_206928.1 hypothetical protein; identified by GeneMark NP_206929.1 hypothetical protein; identified by GeneMark NP_206930.1 hypothetical protein; identified by GeneMark NP_206931.1 hypothetical protein; identified by GeneMark NP_206932.1 similar to GB:M28695 SP:P16095 PID:290464 GB:U00096 PID:1736451 percent identity: 45.81; identified by sequence similarity NP_206933.1 similar to SP:P36559 GB:U01233 PID:402256 PID:882691 GB:U00096 percent identity: 44.64; identified by sequence similarity NP_206934.1 similar to GB:M74819 SP:P29976 PID:166688 percent identity: 54.61; identified by sequence similarity NP_206935.1 hypothetical protein; identified by GeneMark NP_206936.1 similar to GB:M63654 SP:P23480 PID:147017 GB:U00096 PID:1621502 percent identity: 35.53; identified by sequence similarity NP_206937.1 hypothetical protein; identified by GeneMark NP_206938.1 similar to GP:1657506 percent identity: 41.19; identified by sequence similarity NP_206939.1 similar to GP:1657505 percent identity: 37.08; identified by sequence similarity NP_206940.1 similar to SP:P33231 GB:L13970 PID:404693 PID:466741 GB:U00096 percent identity: 58.67; identified by sequence similarity NP_206941.1 similar to SP:P33231 GB:L13970 PID:404693 PID:466741 GB:U00096 percent identity: 55.49; identified by sequence similarity NP_206942.1 similar to GB:M59471 SP:P17802 GB:X52391 PID:146864 PID:42073 percent identity: 38.19; identified by sequence similarity NP_206943.1 CcoN; FixN NP_206944.1 CcoO; FixO NP_206945.1 similar to GP:1377867 percent identity: 44.19; identified by sequence similarity NP_206946.1 similar to GB:Z21854 PID:49411 percent identity: 32.98; identified by sequence similarity NP_206947.1 hypothetical protein; identified by GeneMark NP_206948.1 hypothetical protein; identified by GeneMark NP_206949.1 hypothetical protein; identified by GeneMark NP_206950.1 similar to SP:P49782 PID:1303908 GB:AL009126 percent identity: 25.73; identified by sequence similarity NP_206951.1 hypothetical protein; identified by GeneMark NP_206952.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs NP_206953.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis NP_206954.1 hypothetical protein; identified by GeneMark NP_206955.1 hypothetical protein; identified by GeneMark NP_206956.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis NP_206957.1 hypothetical protein; identified by GeneMark NP_206958.1 similar to SP:P27129 GB:M80599 PID:912479 PID:146657 GB:U00096 percent identity: 28.90; identified by sequence similarity NP_206959.1 similar to GP:1786864 percent identity: 30.57; identified by sequence similarity NP_206961.1 similar to PID:1183839 percent identity: 36.65; identified by sequence similarity NP_206962.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate NP_206965.1 similar to PID:881376 percent identity: 51.02; identified by sequence similarity NP_206966.1 hypothetical protein; identified by GeneMark NP_206967.1 hypothetical protein; identified by GeneMark NP_206968.1 similar to GB:L42023 SP:P44700 PID:1003722 PID:1222349 PID:1204669 percent identity: 40.05; identified by sequence similarity NP_206969.1 hypothetical protein; identified by GeneMark NP_206970.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1 NP_206971.1 similar to GB:M21151 SP:P12281 PID:145539 GB:U00096 PID:1651376 percent identity: 36.28; identified by sequence similarity NP_206972.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus NP_206973.1 hypothetical protein; identified by GeneMark NP_206974.1 similar to PID:671840 SP:Q46105 percent identity: 34.90; identified by sequence similarity NP_206975.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate NP_206976.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA NP_206977.1 similar to GB:L77117 PID:1591717 percent identity: 36.25; identified by sequence similarity NP_206978.1 similar to GP:1786703 percent identity: 37.62; identified by sequence similarity NP_206979.1 Transfers the fatty acyl group on membrane lipoproteins NP_206980.1 hypothetical protein; identified by GeneMark NP_206981.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 NP_206982.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate NP_206983.1 hypothetical protein; identified by GeneMark NP_206984.1 hypothetical protein; identified by GeneMark NP_206985.1 hypothetical protein; identified by GeneMark NP_206988.1 similar to PID:882531 SP:P52082 GB:U00096 PID:1789376 percent identity: 43.14; identified by sequence similarity NP_206989.1 similar to GP:1787284 percent identity: 31.43; identified by sequence similarity NP_206990.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB NP_206991.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB NP_206992.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit NP_206993.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate NP_206994.1 Catalyzes a key regulatory step in fatty acid biosynthesis NP_206995.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis NP_206996.1 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase NP_206997.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate NP_206998.1 hypothetical protein; identified by GeneMark NP_206999.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not NP_207000.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY NP_207001.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs NP_207002.1 hypothetical protein; identified by GeneMark NP_207003.1 hypothetical protein; identified by GeneMark NP_207004.1 hypothetical protein; identified by GeneMark NP_207006.1 similar to SP:P21590 GB:U00007 GB:X55791 PID:405896 PID:42017 percent identity: 38.94; identified by sequence similarity NP_207007.1 hypothetical protein; identified by GeneMark NP_207008.1 molecular chaperone NP_207009.1 similar to GP:1786864 percent identity: 24.31; identified by sequence similarity NP_207010.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica. NP_207011.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs NP_207012.1 similar to GB:U26209 SP:Q13183 PID:1098557 percent identity: 36.55; identified by sequence similarity NP_207013.1 similar to GB:M11330 SP:P06466 PID:1208947 PID:145476 GB:U00096 percent identity: 42.42; identified by sequence similarity NP_207014.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate NP_207015.1 Contingency gene; hypothetical protein; identified by GeneMark NP_207016.1 hypothetical protein; identified by GeneMark NP_207017.1 hypothetical protein; identified by GeneMark NP_207018.1 catalyzes the removal of sulfur from cysteine to form alanine NP_207019.1 similar to PID:762779 percent identity: 37.33; identified by sequence similarity NP_207020.1 hypothetical protein; identified by GeneMark NP_207021.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents NP_207022.1 this fusion consists of methionine sulfoxide A reductase at the N-terminus and B at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion NP_207024.1 similar to percent identity: 27.64; identified by sequence similarity NP_207025.1 similar to GB:AE000511 PID:2313316 PID:2314516 GB:AE000511 PID:2313316 percent identity: 100.00; identified by sequence similarity NP_207026.1 similar to SP:P55189 PID:1256150 GB:AL009126 percent identity: 43.27; identified by sequence similarity NP_207027.1 similar to GB:AE000511 PID:2313322 percent identity: 100.00; identified by sequence similarity NP_207028.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS NP_207029.1 hypothetical protein; identified by GeneMark NP_207030.1 similar to GP:1419555 percent identity: 99.18; identified by sequence similarity NP_207031.1 similar to GB:L42023 SP:P44940 PID:1006059 PID:1221036 PID:1205176 percent identity: 30.53; identified by sequence similarity NP_207032.1 similar to PID:1107532 percent identity: 32.40; identified by sequence similarity NP_207033.1 similar to GP:1786864 percent identity: 31.53; identified by sequence similarity NP_207034.1 hypothetical protein; identified by GeneMark NP_207035.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis NP_207036.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) NP_207037.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins NP_207038.1 similar to SP:P19641 GB:X68873 PID:388220 PID:606125 GB:U00096 percent identity: 31.62; identified by sequence similarity NP_207039.1 hypothetical protein; identified by GeneMark NP_207040.1 hypothetical protein; identified by GeneMark NP_207041.1 similar to SP:P43313 PID:560032 GB:AE000511 PID:2313332 percent identity: 100.00; identified by sequence similarity NP_207042.1 similar to GB:L13078 SP:Q06067 PID:290419 GB:U00096 PID:1736874 percent identity: 30.00; identified by sequence similarity NP_207043.1 hypothetical protein; identified by GeneMark NP_207044.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum NP_207045.1 similar to GB:L42023 SP:P44586 PID:1003361 PID:1222156 PID:1204489 percent identity: 37.71; identified by sequence similarity NP_207046.1 similar to GP:1652146 percent identity: 30.71; identified by sequence similarity NP_207047.1 hypothetical protein; identified by GeneMark NP_207048.1 similar to GP:1736845 percent identity: 39.06; identified by sequence similarity NP_207049.1 similar to GP:1787498 percent identity: 31.41; identified by sequence similarity NP_207050.1 similar to GB:AE000511 PID:2313344 percent identity: 100.00; identified by sequence similarity NP_207052.1 similar to GB:AE000511 PID:2313345 percent identity: 100.00; identified by sequence similarity NP_207053.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis NP_207054.1 hypothetical protein; identified by GeneMark NP_207055.1 similar to GB:M72718 SP:P23454 GB:X56049 PID:142902 PID:39909 percent identity: 27.93; identified by sequence similarity NP_207056.1 similar to GB:L42023 SP:P44936 PID:1006037 PID:1221023 PID:1205165 percent identity: 32.66; identified by sequence similarity NP_207057.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides NP_207058.1 similar to SP:P12364 GB:X06288 PID:42237 percent identity: 33.85; identified by sequence similarity NP_207059.1 hypothetical protein; identified by GeneMark NP_207060.1 hypothetical protein; identified by GeneMark NP_207061.1 similar to GB:D10668 SP:P29538 PID:216715 percent identity: 33.94; identified by sequence similarity NP_207062.1 similar to GP:1563721 percent identity: 97.66; identified by sequence similarity NP_207063.1 similar to SP:P45706 PID:870925 PID:1405449 GB:AL009126 percent identity: 35.44; identified by sequence similarity NP_207064.1 similar to GP:151524 percent identity: 25.56; identified by sequence similarity NP_207065.1 Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline NP_207066.1 hypothetical protein; identified by GeneMark NP_207067.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) NP_207068.2 hypothetical protein; identified by GeneMark NP_207069.1 hypothetical protein; identified by GeneMark NP_207070.1 hypothetical protein; identified by GeneMark NP_207071.1 hypothetical protein; identified by GeneMark NP_207072.1 similar to GB:L77117 SP:Q58075 PID:1591374 percent identity: 38.00; identified by sequence similarity NP_207073.1 similar to GB:M63489 SP:P23478 PID:142440 PID:2145362 PID:2226192 percent identity: 27.24; identified by sequence similarity NP_207074.1 hypothetical protein; identified by GeneMark NP_207075.1 similar to GB:M93695 PID:148685 percent identity: 52.50; identified by sequence similarity NP_207076.1 similar to GB:M87049 SP:P25552 GB:M83316 PID:148183 PID:146252 percent identity: 26.30; identified by sequence similarity NP_207077.1 similar to SP:P24173 GB:X62530 PID:42715 PID:466759 GB:U00096 percent identity: 31.65; identified by sequence similarity NP_207078.1 acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; essential for survival; plays a role in cell responses to environmental changes NP_207079.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) NP_207080.1 hypothetical protein; identified by GeneMark NP_207081.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis NP_207082.1 similar to GB:L77117 SP:Q58111 PID:1591415 percent identity: 29.18; identified by sequence similarity NP_207083.1 similar to SP:P54462 PID:1303812 PID:1890061 GB:AL009126 percent identity: 30.84; identified by sequence similarity NP_207084.1 similar to GB:D26185 SP:P37476 PID:467458 GB:AL009126 percent identity: 41.16; identified by sequence similarity NP_207085.1 hypothetical protein; identified by GeneMark NP_207086.1 hypothetical protein; identified by GeneMark NP_207087.1 similar to SP:Q48245 PID:2228502 PID:2327044 PID:2327046 PID:471729 percent identity: 30.59; identified by sequence similarity NP_207088.1 similar to GB:L42023 SP:P44316 PID:1005663 PID:1220814 PID:1204975 percent identity: 42.68; identified by sequence similarity NP_207089.1 hypothetical protein; identified by GeneMark NP_207090.1 hypothetical protein; identified by GeneMark NP_207091.1 similar to GB:K02673 SP:P05041 GB:U07748 GB:U07749 GB:U07755 percent identity: 35.09; identified by sequence similarity NP_207092.1 aliphatic amidase; catalyzes the hydrolysis of short-chain aliphatic amides to their organic acids and can also transfer the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates NP_207093.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook NP_207094.1 similar to GB:D13267 SP:P02422 PID:216636 PID:606124 GB:U00096 percent identity: 46.08; identified by sequence similarity NP_207095.1 involved in the peptidyltransferase reaction during translation NP_207096.1 similar to SP:P23847 GB:M35045 GB:X58051 PID:145797 PID:349225 percent identity: 39.84; identified by sequence similarity NP_207097.1 similar to SP:P37316 PID:349226 PID:466682 GB:U00096 PID:1789965 percent identity: 49.25; identified by sequence similarity NP_207098.1 similar to SP:P37315 PID:349227 PID:466681 GB:U00096 PID:1789964 percent identity: 52.78; identified by sequence similarity NP_207099.1 similar to SP:P42064 PID:677943 GB:AL009126 percent identity: 59.46; identified by sequence similarity NP_207100.1 similar to SP:P37313 GB:L08399 PID:466679 PID:349229 GB:U00096 percent identity: 54.75; identified by sequence similarity NP_207101.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication NP_207102.1 hypothetical protein; identified by GeneMark NP_207103.1 hypothetical protein; identified by GeneMark NP_207104.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway NP_207105.1 hypothetical protein; identified by GeneMark NP_207106.1 hypothetical protein; identified by GeneMark NP_207107.1 similar to PID:929801 SP:P55176 percent identity: 31.27; identified by sequence similarity NP_207108.1 similar to GB:L05611 SP:Q04729 PID:551706 percent identity: 33.66; identified by sequence similarity NP_207109.1 hypothetical protein; identified by GeneMark NP_207110.1 similar to GP:953179 percent identity: 34.05; identified by sequence similarity NP_207111.1 similar to SP:P46907 PID:971337 PID:2224757 GB:AL009126 percent identity: 23.56; identified by sequence similarity NP_207113.1 similar to GB:L24000 PID:398107 percent identity: 70.21; identified by sequence similarity NP_207114.1 hypothetical protein; identified by GeneMark NP_207115.1 similar to GB:AE000511 PID:2313410 percent identity: 100.00; identified by sequence similarity NP_207116.1 similar to GB:L42023 SP:P44061 PID:1005911 PID:1220954 PID:1205103 percent identity: 47.18; identified by sequence similarity NP_207117.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase NP_207118.1 similar to SP:Q10703 PID:1370261 GB:AL123456 percent identity: 36.36; identified by sequence similarity NP_207119.1 Essential for recycling GMP and indirectly, cGMP NP_207120.1 similar to GP:632549 percent identity: 28.74; identified by sequence similarity NP_207121.1 membrane-associated cation-independent thermostable nuclease; preferentially cleaves ss-DNA; involved in DNA transformation NP_207122.1 similar to GB:AE000511 PID:2313429 percent identity: 100.00; identified by sequence similarity NP_207123.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod NP_207124.1 similar to GB:J05023 SP:P13266 PID:146944 percent identity: 31.92; identified by sequence similarity NP_207125.1 similar to PID:896459 percent identity: 23.27; identified by sequence similarity NP_207126.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate NP_207127.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers NP_207128.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis NP_207129.1 similar to GB:J03153 SP:P18197 PID:146867 GB:U00096 PID:1651574 percent identity: 50.19; identified by sequence similarity NP_207130.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell NP_207131.1 similar to GB:L42023 SP:P43862 PID:1006171 PID:1221098 PID:609332 percent identity: 32.91; identified by sequence similarity NP_207132.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function NP_207135.1 hypothetical protein; identified by GeneMark NP_207136.1 hypothetical protein; identified by GeneMark NP_207137.1 hypothetical protein; identified by GeneMark NP_207138.1 hypothetical protein; identified by GeneMark NP_207139.1 hypothetical protein; identified by GeneMark NP_207140.1 hypothetical protein; identified by GeneMark NP_207145.1 similar to GB:U02214 GB:L43967 SP:P47451 PID:406497 PID:1045895 percent identity: 31.79; identified by sequence similarity NP_207146.1 similar to GB:M54884 SP:P21893 PID:147550 PID:887842 GB:U00096 percent identity: 33.56; identified by sequence similarity NP_207147.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer NP_207148.1 hypothetical protein; identified by GeneMark NP_207149.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod NP_207150.1 One of three proteins involved in switching the direction of the flagellar rotation NP_207151.1 binds to and inhibits the function of flagella specific ATPase FliI NP_207152.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate NP_207153.1 binds to the ribosome on the universally-conserved alpha-sarcin loop NP_207154.1 hypothetical protein; identified by GeneMark NP_207155.1 similar to GB:L42023 SP:P45200 PID:1007519 PID:1221570 PID:1205665 percent identity: 57.55; identified by sequence similarity NP_207156.1 hypothetical protein; identified by GeneMark NP_207158.1 similar to GB:Z25478 PID:396521 SP:Q59083 percent identity: 43.08; identified by sequence similarity NP_207159.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability NP_207160.1 similar to GB:L42023 SP:P45333 PID:1008751 PID:1205933 PID:1221857 percent identity: 28.83; identified by sequence similarity NP_207161.1 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins NP_207162.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE NP_207164.1 similar to GB:L77117 PID:1591718 percent identity: 35.34; identified by sequence similarity NP_207165.1 hypothetical protein; identified by GeneMark NP_207168.1 biotin carboxylase; biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA; catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism NP_207169.1 similar to GB:M32214 SP:P02905 GB:M83198 GB:X14825 PID:145174 percent identity: 30.77; identified by sequence similarity NP_207170.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis NP_207171.1 similar to GP:1800185 percent identity: 31.40; identified by sequence similarity NP_207172.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase NP_207173.1 hypothetical protein; identified by GeneMark NP_207174.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic NP_207175.1 similar to GB:X76687 SP:P39691 PID:495244 percent identity: 26.45; identified by sequence similarity NP_207176.1 similar to SP:P48257 percent identity: 37.55; identified by sequence similarity NP_207177.1 Contingency gene; similar to GB:X78031 SP:Q11130 PID:516293 PID:520464 PID:520525 percent identity: 39.22; identified by sequence similarity NP_207178.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer NP_207179.1 similar to SP:P45873 PID:853777 GB:AL009126 percent identity: 35.87; identified by sequence similarity NP_207180.1 similar to SP:P47154 PID:1015837 PID:1679741 percent identity: 36.16; identified by sequence similarity NP_207181.1 hypothetical protein; identified by GeneMark NP_207182.1 hypothetical protein; identified by GeneMark NP_207183.1 hypothetical protein; identified by GeneMark NP_207184.1 hypothetical protein; identified by GeneMark NP_207185.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity NP_207186.1 similar to GB:L42023 SP:P43985 SP:P43986 PID:1003531 PID:1003533 percent identity: 39.83; identified by sequence similarity NP_207187.1 similar to SP:P43312 percent identity: 98.59; identified by sequence similarity NP_207188.1 similar to GB:L42023 PID:1005708 PID:1220842 PID:1204999 SP:Q57549 percent identity: 38.27; identified by sequence similarity NP_207189.1 similar to GB:M13462 SP:P07365 PID:145520 GB:U00096 PID:1736540 percent identity: 34.31; identified by sequence similarity NP_207190.1 similar to PID:1113815 SP:Q44737 GB:AE000783 percent identity: 41.41; identified by sequence similarity NP_207191.1 similar to SP:P37599 GB:U05345 GB:Z29584 PID:453378 PID:580837 percent identity: 31.66; identified by sequence similarity NP_207192.1 hypothetical protein; identified by GeneMark NP_207193.1 similar to GB:L42023 PID:1003084 PID:1222000 PID:1204348 SP:P44506 percent identity: 40.26; identified by sequence similarity NP_207194.1 similar to SP:P26615 GB:M87049 GB:X65013 PID:148243 percent identity: 33.70; identified by sequence similarity NP_207195.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate NP_207196.1 hypothetical protein; identified by GeneMark NP_207197.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins NP_207198.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway NP_207199.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis NP_207200.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily NP_207201.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily NP_207202.1 similar to GB:L42023 SP:P44956 PID:1006123 PID:1221070 PID:1205210 percent identity: 38.60; identified by sequence similarity NP_207203.1 similar to GB:U00013 PID:466883 PID:2398703 percent identity: 27.31; identified by sequence similarity NP_207204.1 hypothetical protein; identified by GeneMark NP_207205.1 similar to GB:L42023 SP:P44798 PID:1005502 PID:1220726 PID:1204894 percent identity: 42.75; identified by sequence similarity NP_207206.1 hypothetical protein; identified by GeneMark NP_207207.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway NP_207208.1 similar to SP:Q48254 percent identity: 24.19; identified by sequence similarity NP_207212.1 similar to GB:L25848 GB:X52093 PID:1177217 PID:439619 PID:1150644 percent identity: 33.91; identified by sequence similarity NP_207213.1 similar to GP:1787591 percent identity: 44.44; identified by sequence similarity NP_207214.1 similar to GB:M98330 SP:P30010 PID:145514 GB:U00096 PID:1742735 percent identity: 39.65; identified by sequence similarity NP_207215.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content NP_207216.1 hypothetical protein; identified by GeneMark NP_207217.1 similar to GB:L42023 SP:P44167 PID:1007367 PID:1221484 PID:1205587 percent identity: 45.56; identified by sequence similarity NP_207218.1 hypothetical protein; identified by GeneMark NP_207219.1 similar to GB:U10927 SP:P39859 PID:506706 percent identity: 29.00; identified by sequence similarity NP_207220.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis NP_207221.1 hypothetical protein; identified by GeneMark NP_207222.1 hypothetical protein; identified by GeneMark NP_207223.1 hypothetical protein; identified by GeneMark NP_207224.1 hypothetical protein; identified by GeneMark NP_207226.1 similar to GP:1354148 percent identity: 25.58; identified by sequence similarity NP_207228.1 hypothetical protein; identified by GeneMark NP_207229.1 similar to GB:U02111 GB:L43967 SP:P47354 PID:414508 PID:1045787 percent identity: 30.67; identified by sequence similarity NP_207234.1 hypothetical protein; identified by GeneMark NP_207235.1 similar to GP:1800172 percent identity: 97.18; identified by sequence similarity NP_207236.1 similar to GP:1800173 percent identity: 93.35; identified by sequence similarity NP_207237.1 hypothetical protein; identified by GeneMark NP_207238.1 similar to GB:L42023 SP:P43012 PID:1007395 PID:1221500 PID:687790 percent identity: 31.36; identified by sequence similarity NP_207239.1 similar to PID:1129099 percent identity: 23.50; identified by sequence similarity NP_207240.1 hypothetical protein; identified by GeneMark NP_207241.1 hypothetical protein; identified by GeneMark NP_207242.1 hypothetical protein; identified by GeneMark NP_207244.1 hypothetical protein; identified by GeneMark NP_207245.1 similar to SP:P34243 PID:395256 PID:486007 percent identity: 38.22; identified by sequence similarity NP_207246.1 hypothetical protein; identified by GeneMark NP_207247.1 hypothetical protein; identified by GeneMark NP_207248.1 hypothetical protein; identified by GeneMark NP_207249.1 hypothetical protein; identified by GeneMark NP_207250.1 similar to GP:2983256 percent identity: 34.34; identified by sequence similarity NP_207251.1 hypothetical protein; identified by GeneMark NP_207252.1 hypothetical protein; identified by GeneMark NP_207254.1 hypothetical protein; identified by GeneMark NP_207255.1 hypothetical protein; identified by GeneMark NP_207256.1 hypothetical protein; identified by GeneMark NP_207257.1 similar to SP:P17794 PID:154786 PID:39156 percent identity: 25.28; identified by sequence similarity NP_207258.1 hypothetical protein; identified by GeneMark NP_207260.1 similar to GB:L77117 percent identity: 32.49; identified by sequence similarity NP_207261.1 similar to SP:P10484 GB:X75452 PID:41748 PID:450688 percent identity: 28.71; identified by sequence similarity NP_207262.1 Contingency gene; similar to GB:L77117 SP:Q58611 PID:1591843 percent identity: 31.67; identified by sequence similarity NP_207263.1 similar to GP:1800177 percent identity: 95.55; identified by sequence similarity NP_207264.1 similar to GP:1800178 percent identity: 95.69; identified by sequence similarity NP_207265.1 similar to GP:1800179 percent identity: 100.00; identified by sequence similarity NP_207266.1 similar to GP:1800180 percent identity: 97.14; identified by sequence similarity NP_207267.1 similar to GP:1800181 percent identity: 95.06; identified by sequence similarity NP_207268.1 similar to GP:1800182 percent identity: 97.92; identified by sequence similarity NP_207269.1 similar to GP:1800183 percent identity: 99.28; identified by sequence similarity NP_207270.1 similar to GB:AE000511 PID:1800185 PID:2313583 percent identity: 100.00; identified by sequence similarity NP_207271.1 similar to GP:1800186 percent identity: 95.93; identified by sequence similarity NP_207272.1 similar to GB:L42023 SP:P45322 PID:1008031 PID:1205921 PID:1221843 percent identity: 28.71; identified by sequence similarity NP_207273.1 similar to SP:P37732 GB:X69077 PID:49180 percent identity: 37.38; identified by sequence similarity NP_207274.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation NP_207275.1 similar to GB:AE000511 PID:2313591 PID:2314070 percent identity: 100.00; identified by sequence similarity NP_207276.1 similar to SP:Q03055 PID:48457 percent identity: 42.07; identified by sequence similarity NP_207277.1 hypothetical protein; identified by GeneMark NP_207278.1 similar to GB:L19201 SP:P32132 PID:304976 GB:U00096 PID:1790302 percent identity: 54.08; identified by sequence similarity NP_207280.1 hypothetical protein; identified by GeneMark NP_207281.1 hypothetical protein; identified by GeneMark NP_207282.1 similar to PID:687687 percent identity: 30.80; identified by sequence similarity NP_207283.1 hypothetical protein; identified by GeneMark NP_207284.1 hypothetical protein; identified by GeneMark NP_207285.1 hypothetical protein; identified by GeneMark NP_207286.1 hypothetical protein; identified by GeneMark NP_207287.1 similar to GB:L77117 SP:Q57604 PID:1498918 percent identity: 25.75; identified by sequence similarity NP_207288.1 required for 70S ribosome assembly NP_207289.1 hypothetical protein; identified by GeneMark NP_207290.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan NP_207291.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation NP_207292.1 hypothetical protein; identified by GeneMark NP_207293.1 similar to GP:1763299 percent identity: 99.25; identified by sequence similarity NP_207294.1 similar to GB:L42023 SP:P45320 PID:1008027 PID:1205919 PID:1221841 percent identity: 31.69; identified by sequence similarity NP_207295.1 similar to GB:L42023 SP:P45320 PID:1008027 PID:1205919 PID:1221841 percent identity: 30.75; identified by sequence similarity NP_207296.1 similar to GB:M87049 SP:P00631 GB:M30198 PID:147558 PID:148220 percent identity: 33.82; identified by sequence similarity NP_207297.1 binds the polymerase to DNA and acts as a sliding clamp NP_207298.1 negatively supercoils closed circular double-stranded DNA NP_207302.1 hypothetical protein; identified by GeneMark NP_207303.1 similar to GB:L42023 SP:P44693 PID:1003702 PID:1222338 PID:1204659 percent identity: 29.81; identified by sequence similarity NP_207304.1 similar to GP:1262938 percent identity: 36.36; identified by sequence similarity NP_207305.1 hypothetical protein; identified by GeneMark NP_207306.1 similar to GP:1763300 percent identity: 98.01; identified by sequence similarity NP_207307.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis NP_207308.1 hypothetical protein; identified by GeneMark NP_207309.1 similar to GB:X05173 SP:P06711 GB:J01618 GB:M13746 GB:V00282 percent identity: 49.24; identified by sequence similarity NP_207310.1 hypothetical protein; identified by GeneMark NP_207311.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk NP_207312.1 heat shock protein involved in degradation of misfolded proteins NP_207313.1 heat shock protein involved in degradation of misfolded proteins NP_207314.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome NP_207315.1 similar to GP:1800155 percent identity: 96.88; identified by sequence similarity NP_207316.1 similar to GP:1800156 percent identity: 95.12; identified by sequence similarity NP_207317.1 similar to GP:1800157 percent identity: 94.63; identified by sequence similarity NP_207318.1 similar to GP:1800159 percent identity: 98.13; identified by sequence similarity NP_207319.1 similar to GP:1800160 percent identity: 95.74; identified by sequence similarity NP_207320.1 similar to GP:1800161 percent identity: 99.06; identified by sequence similarity NP_207321.1 similar to GP:1800162 percent identity: 100.00; identified by sequence similarity NP_207322.1 similar to GP:1800163 percent identity: 97.49; identified by sequence similarity NP_207323.1 similar to GP:1800165 percent identity: 94.57; identified by sequence similarity NP_207324.1 similar to GP:1800166 percent identity: 99.04; identified by sequence similarity NP_207325.1 similar to GP:1800167 percent identity: 98.88; identified by sequence similarity NP_207326.1 similar to GP:1800168 percent identity: 98.41; identified by sequence similarity NP_207327.1 similar to GP:1800169 percent identity: 97.20; identified by sequence similarity NP_207328.1 similar to GP:1752681 percent identity: 98.93; identified by sequence similarity NP_207330.1 similar to GP:1752682 percent identity: 97.96; identified by sequence similarity NP_207331.1 similar to GP:1752685 percent identity: 97.62; identified by sequence similarity NP_207332.1 similar to GP:1752687 percent identity: 96.36; identified by sequence similarity NP_207333.1 similar to GP:1752689 percent identity: 98.94; identified by sequence similarity NP_207334.1 similar to GP:1752690 percent identity: 95.27; identified by sequence similarity NP_207335.1 similar to GP:1752691 percent identity: 98.73; identified by sequence similarity NP_207336.1 similar to GP:1752692 percent identity: 99.48; identified by sequence similarity NP_207337.1 similar to GP:1752693 percent identity: 97.84; identified by sequence similarity NP_207338.1 similar to GP:1752694 percent identity: 97.89; identified by sequence similarity NP_207339.1 similar to GP:1752695 percent identity: 95.52; identified by sequence similarity NP_207340.1 similar to GP:1752696 percent identity: 98.98; identified by sequence similarity NP_207341.1 similar to GP:1752697 percent identity: 98.54; identified by sequence similarity NP_207342.1 similar to GP:1752698 percent identity: 95.65; identified by sequence similarity NP_207343.1 similar to GP:1752700 percent identity: 92.87; identified by sequence similarity NP_207344.1 converts L-glutamate to D-glutamate, a component of peptidoglycan NP_207345.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes NP_207346.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome NP_207347.1 similar to SP:P45528 PID:606086 GB:U00096 PID:1789535 percent identity: 37.78; identified by sequence similarity NP_207348.1 similar to GB:L42023 SP:P44906 PID:1005923 PID:1220960 PID:1205109 percent identity: 30.04; identified by sequence similarity NP_207349.1 hypothetical protein; identified by GeneMark NP_207350.1 hypothetical protein; identified by GeneMark NP_207351.1 hypothetical protein; identified by GeneMark NP_207352.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein NP_207353.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP NP_207354.1 carries the fatty acid chain in fatty acid biosynthesis NP_207356.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis NP_207357.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA NP_207358.1 hypothetical protein; identified by GeneMark NP_207359.2 hypothetical protein; identified by GeneMark NP_207360.1 hypothetical protein; identified by GeneMark NP_207361.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate NP_207362.1 similar to GP:1620467 percent identity: 25.43; identified by sequence similarity NP_207363.1 hypothetical protein; identified by GeneMark NP_207364.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 NP_207365.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides NP_207366.1 similar to SP:P33366 PID:405866 GB:U00096 PID:1788458 percent identity: 29.51; identified by sequence similarity NP_207367.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis NP_207368.1 hypothetical protein; identified by GeneMark NP_207369.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity NP_207370.1 similar to GP:1565238 percent identity: 38.83; identified by sequence similarity NP_207371.1 similar to GB:L42023 SP:P44454 PID:1004130 PID:1221918 PID:1204273 percent identity: 40.34; identified by sequence similarity NP_207372.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate NP_207373.1 hypothetical protein; identified by GeneMark NP_207374.1 hypothetical protein; identified by GeneMark NP_207375.1 hypothetical protein; identified by GeneMark NP_207376.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis NP_207377.1 hypothetical protein; identified by GeneMark NP_207378.1 hypothetical protein; identified by GeneMark NP_207379.1 One of three proteins involved in switching the direction of the flagellar rotation NP_207380.1 similar to GB:L42023 SP:P44319 PID:1008025 PID:1205918 PID:1221840 percent identity: 40.10; identified by sequence similarity NP_207381.1 hypothetical protein; identified by GeneMark NP_207382.1 similar to GB:L42023 SP:P44720 PID:1003798 PID:1222389 PID:1204707 percent identity: 32.43; identified by sequence similarity NP_207383.1 similar to SP:P18083 GB:D00590 PID:217132 percent identity: 42.59; identified by sequence similarity NP_207384.1 Couples the complete acetyl-CoA oxidation to aromatic ring reduction by the use of the low-potential electron shuttle ferredoxin NP_207385.1 Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin NP_207386.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates NP_207387.1 similar to SP:P40815 percent identity: 30.63; identified by sequence similarity NP_207388.1 similar to SP:P12364 GB:X06288 PID:42237 percent identity: 37.97; identified by sequence similarity NP_207389.1 hypothetical protein; identified by GeneMark NP_207390.1 hypothetical protein; identified by GeneMark NP_207391.1 Tip-alpha; forms a dimer; found in culture supernatant; induces TNF-alpha and NF-kappa-B in cell cultures of mouse cells NP_207392.1 similar to SP:P02918 GB:X02164 PID:581194 PID:606330 GB:U00096 percent identity: 33.69; identified by sequence similarity NP_207393.1 similar to GB:L42023 SP:P44422 PID:1007761 PID:1221700 PID:1205788 percent identity: 34.01; identified by sequence similarity NP_207394.1 similar to SP:P15492 GB:X16945 PID:48362 PID:2190531 percent identity: 45.39; identified by sequence similarity NP_207395.1 similar to GB:M86869 SP:P33116 GB:U09819 PID:143559 PID:143566 percent identity: 29.65; identified by sequence similarity NP_207396.1 FlaA; structural flagella protein; in Helicobacter flagella are composed of flagellin A and flagellin B; the amounts of each seem to be controlled by environmental conditions NP_207397.1 similar to GB:L77117 PID:1592082 percent identity: 36.60; identified by sequence similarity NP_207398.1 hypothetical protein; identified by GeneMark NP_207399.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III NP_207400.1 hypothetical protein; identified by GeneMark NP_207401.1 similar to GB:L42023 PID:1005989 PID:1220998 PID:1205141 SP:Q57500 percent identity: 24.21; identified by sequence similarity NP_207402.1 similar to GB:L42023 PID:1005991 PID:1220999 PID:1205142 SP:Q57124 percent identity: 29.74; identified by sequence similarity NP_207403.1 hypothetical protein; identified by GeneMark NP_207408.1 similar to PID:575301 PID:805090 percent identity: 31.07; identified by sequence similarity NP_207409.1 hypothetical protein; identified by GeneMark NP_207410.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB NP_207411.1 similar to SP:P37599 GB:U05345 GB:Z29584 PID:453378 PID:580837 percent identity: 27.94; identified by sequence similarity NP_207412.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes NP_207413.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP NP_207414.1 catalyzes the hydrolysis of pyrophosphate to phosphate NP_207415.1 MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange NP_207416.1 hypothetical protein; identified by GeneMark NP_207417.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis NP_207418.1 similar to PID:1146246 SP:P53001 GB:AL009126 percent identity: 26.39; identified by sequence similarity NP_207419.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis NP_207420.1 similar to GB:X63201 SP:P41396 PID:38947 percent identity: 36.11; identified by sequence similarity NP_207423.1 hypothetical protein; identified by GeneMark NP_207424.1 similar to GB:L42023 SP:P44803 PID:1005512 PID:1220732 PID:1204899 percent identity: 61.73; identified by sequence similarity NP_207425.1 similar to SP:P31884 GB:X65189 PID:296082 percent identity: 68.95; identified by sequence similarity NP_207426.1 similar to SP:P31883 GB:X65189 PID:1333732 percent identity: 68.54; identified by sequence similarity NP_207427.1 similar to SP:P31875 PID:48518 percent identity: 51.40; identified by sequence similarity NP_207428.1 similar to SP:P31876 PID:581830 percent identity: 54.72; identified by sequence similarity NP_207429.1 hypothetical protein; identified by GeneMark NP_207431.1 hypothetical protein; identified by GeneMark NP_207432.1 Contingency gene; similar to GB:AE000511 PID:2313774 percent identity: 100.00; identified by sequence similarity NP_207433.1 similar to GB:L42023 SP:P44124 PID:1007058 PID:1221314 PID:1205434 percent identity: 41.01; identified by sequence similarity NP_207434.1 similar to GP:755607 percent identity: 37.44; identified by sequence similarity NP_207435.1 hypothetical protein; identified by GeneMark NP_207436.1 similar to GB:L42023 PID:1007227 PID:1221408 PID:1205518 SP:Q57431 percent identity: 45.89; identified by sequence similarity NP_207437.1 charges one glutamine molecule and pairs it with tRNA(Gln) NP_207438.1 similar to SP:P25254 percent identity: 30.26; identified by sequence similarity NP_207439.1 similar to GB:U14003 SP:P03810 GB:M69185 PID:147836 PID:537232 percent identity: 32.17; identified by sequence similarity NP_207440.1 similar to GP:1345068 percent identity: 65.56; identified by sequence similarity NP_207441.1 hypothetical protein; identified by GeneMark NP_207442.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active NP_207443.1 catalyzes the formation of fumarate from aspartate NP_207444.1 hypothetical protein; identified by GeneMark NP_207445.1 Contingency gene; similar to GB:X78031 SP:Q11130 PID:516293 PID:520464 PID:520525 percent identity: 39.22; identified by sequence similarity NP_207446.1 similar to SP:P06862 GB:X03046 PID:42948 PID:537228 GB:U00096 percent identity: 36.55; identified by sequence similarity NP_207447.1 similar to GB:S54729 SP:P52093 GB:AE000511 PID:2313771 percent identity: 100.00; identified by sequence similarity NP_207448.1 similar to GB:L77117 SP:Q58826 PID:1500312 percent identity: 32.01; identified by sequence similarity NP_207449.1 similar to GB:L42023 SP:P46024 SP:P44935 PID:1006035 PID:1221022 percent identity: 27.51; identified by sequence similarity NP_207450.1 similar to GB:L77117 SP:Q58826 PID:1500312 percent identity: 35.99; identified by sequence similarity NP_207451.1 similar to GB:L08471 SP:Q04805 PID:142824 PID:881434 GB:AL009126 percent identity: 23.94; identified by sequence similarity NP_207452.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA NP_207453.1 hypothetical protein; identified by GeneMark NP_207454.1 hypothetical protein; identified by GeneMark NP_207455.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids NP_207456.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity NP_207457.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis NP_207458.1 hypothetical protein; identified by GeneMark NP_207459.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III NP_207460.1 similar to GB:M20938 SP:P13034 PID:146179 GB:U00096 PID:1788576 percent identity: 26.52; identified by sequence similarity NP_207461.1 hypothetical protein; identified by GeneMark NP_207464.1 hypothetical protein; identified by GeneMark NP_207465.1 similar to GB:AE000511 PID:2313793 percent identity: 100.00; identified by sequence similarity NP_207466.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate NP_207467.1 hypothetical protein; identified by GeneMark NP_207468.1 hypothetical protein; identified by GeneMark NP_207469.1 similar to GB:M54884 SP:P21891 PID:147548 PID:887844 GB:U00096 percent identity: 31.80; identified by sequence similarity NP_207470.1 similar to GB:L42023 SP:P44687 PID:1003688 PID:1222330 PID:1204652 percent identity: 40.97; identified by sequence similarity NP_207471.1 similar to GB:L77117 SP:Q57883 PID:1591145 percent identity: 28.17; identified by sequence similarity NP_207474.1 Catalyzes the rate-limiting step in dNTP synthesis NP_207475.1 hypothetical protein; identified by GeneMark NP_207476.1 hypothetical protein; identified by GeneMark NP_207477.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis NP_207480.1 similar to SP:P13036 GB:M20981 GB:M26397 GB:M63115 PID:145922 percent identity: 29.69; identified by sequence similarity NP_207481.1 similar to SP:P33650 PID:606344 PID:1199515 GB:U00096 PID:1789813 percent identity: 33.60; identified by sequence similarity NP_207484.1 similar to GB:L42023 SP:P44873 PID:1005748 PID:1220864 PID:1205019 percent identity: 52.04; identified by sequence similarity NP_207485.1 similar to SP:P42315 PID:666002 GB:AL009126 percent identity: 65.52; identified by sequence similarity NP_207486.1 similar to SP:P42316 PID:666003 GB:AL009126 percent identity: 72.95; identified by sequence similarity NP_207487.1 similar to GB:L42023 SP:P44051 PID:1005750 PID:1220865 PID:1205020 percent identity: 46.68; identified by sequence similarity NP_207489.1 similar to SP:Q01262 PID:151282 PID:216831 percent identity: 28.57; identified by sequence similarity NP_207490.1 similar to GB:L77117 PID:1591627 percent identity: 26.92; identified by sequence similarity NP_207491.1 hypothetical protein; identified by GeneMark NP_207493.1 hypothetical protein; identified by GeneMark NP_207494.1 similar to GB:U00006 SP:P00556 GB:K00127 PID:396377 PID:457112 percent identity: 45.79; identified by sequence similarity NP_207495.1 negatively supercoils closed circular double-stranded DNA NP_207496.1 hypothetical protein; identified by GeneMark NP_207497.1 similar to PID:777754 percent identity: 44.20; identified by sequence similarity NP_207499.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate NP_207500.1 similar to GB:AE000511 PID:2313829 percent identity: 100.00; identified by sequence similarity NP_207501.1 similar to GP:1122760 percent identity: 40.13; identified by sequence similarity NP_207502.1 hypothetical protein; identified by GeneMark NP_207503.1 similar to GB:L77117 SP:Q59045 PID:1592233 percent identity: 49.64; identified by sequence similarity NP_207504.1 similar to GP:1800185 percent identity: 33.71; identified by sequence similarity NP_207505.1 hypothetical protein; identified by GeneMark NP_207508.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen NP_207509.1 similar to GB:M24926 SP:P25885 PID:511887 percent identity: 52.32; identified by sequence similarity NP_207510.1 similar to GB:L42023 SP:P44492 PID:1003034 PID:1221973 PID:1204323 percent identity: 30.21; identified by sequence similarity NP_207511.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA NP_207512.1 similar to GP:1519238 percent identity: 33.52; identified by sequence similarity NP_207515.1 hypothetical protein; identified by GeneMark NP_207517.1 similar to PID:758652 PID:895919 SP:P50286 percent identity: 54.13; identified by sequence similarity NP_207518.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB NP_207520.1 hypothetical protein; identified by GeneMark NP_207521.1 similar to GB:L42023 SP:P44965 PID:1006159 PID:1221092 PID:1205229 percent identity: 33.33; identified by sequence similarity NP_207522.1 similar to GB:D26185 SP:P37563 PID:467456 GB:AL009126 percent identity: 29.28; identified by sequence similarity NP_207523.1 hypothetical protein; identified by GeneMark NP_207524.1 hypothetical protein; identified by GeneMark NP_207525.1 hypothetical protein; identified by GeneMark NP_207526.1 hypothetical protein; identified by GeneMark NP_207527.1 hypothetical protein; identified by GeneMark NP_207528.1 similar to SP:P54462 PID:1303812 PID:1890061 GB:AL009126 percent identity: 30.99; identified by sequence similarity NP_207529.1 similar to GB:L42023 SP:P43859 PID:1005561 PID:1005597 PID:1220758 percent identity: 27.12; identified by sequence similarity NP_207530.1 similar to GB:L77117 PID:1591623 percent identity: 30.73; identified by sequence similarity NP_207531.1 similar to GB:L42023 SP:P44157 PID:1007281 PID:1221437 PID:1205544 percent identity: 33.33; identified by sequence similarity NP_207532.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli NP_207533.1 similar to PID:1652609 percent identity: 26.70; identified by sequence similarity NP_207534.1 similar to PID:1165288 GB:AE000783 percent identity: 25.70; identified by sequence similarity NP_207535.1 similar to GB:L77117 SP:Q58276 PID:1499694 percent identity: 30.23; identified by sequence similarity NP_207536.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP NP_207537.1 similar to GB:M22857 SP:P15035 PID:147695 GB:U00096 PID:1651261 percent identity: 37.71; identified by sequence similarity NP_207538.1 similar to GB:U02214 GB:L43967 SP:P47451 PID:406497 PID:1045895 percent identity: 33.68; identified by sequence similarity NP_207539.1 hypothetical protein; identified by GeneMark NP_207540.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine NP_207541.1 similar to GB:L42023 SP:P44871 PID:1005744 PID:1220862 PID:1205017 percent identity: 37.56; identified by sequence similarity NP_207542.1 similar to GB:L42023 SP:P44872 PID:1005746 PID:1220863 PID:1205018 percent identity: 24.10; identified by sequence similarity NP_207543.1 hypothetical protein; identified by GeneMark NP_207544.1 possibly involved in flagella export NP_207545.1 involved in flagellin assembly NP_207546.1 flagellin specific chaperone NP_207547.1 hypothetical protein; identified by GeneMark NP_207548.1 similar to GB:L42023 PID:1003140 PID:1222031 PID:1204377 SP:Q57097 percent identity: 32.31; identified by sequence similarity NP_207549.1 hypothetical protein; identified by GeneMark NP_207550.1 similar to GP:624085 percent identity: 40.00; identified by sequence similarity NP_207551.1 similar to GB:L42023 SP:P44640 PID:1003543 PID:1222251 PID:1204578 percent identity: 47.58; identified by sequence similarity NP_207552.1 similar to PID:971571 percent identity: 30.56; identified by sequence similarity NP_207553.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP NP_207554.1 hypothetical protein; identified by GeneMark NP_207555.1 hypothetical protein; identified by GeneMark NP_207556.1 similar to GB:L42023 SP:P44870 PID:1005742 PID:1220861 PID:1205016 percent identity: 46.64; identified by sequence similarity NP_207557.1 hypothetical protein; identified by GeneMark NP_207558.1 hypothetical protein; identified by GeneMark NP_207559.1 hypothetical protein; identified by GeneMark NP_207561.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z NP_207562.1 MobA; links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide; involved in molybdenum cofactor biosynthesis NP_207563.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export NP_207564.1 hypothetical protein; identified by GeneMark NP_207565.1 similar to SP:P36548 GB:X75413 PID:453968 GB:U00096 PID:1788776 percent identity: 26.81; identified by sequence similarity NP_207566.1 hypothetical protein; identified by GeneMark NP_207567.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) NP_207568.1 similar to GB:L10328 SP:P17580 GB:M24503 PID:290500 PID:551840 percent identity: 36.75; identified by sequence similarity NP_207569.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits NP_207570.1 Catalyzes the phosphorylation of UMP to UDP NP_207571.1 hypothetical protein; identified by GeneMark NP_207572.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate NP_207573.1 hypothetical protein; identified by GeneMark NP_207574.1 hypothetical protein; identified by GeneMark NP_207575.1 hypothetical protein; identified by GeneMark NP_207576.1 hypothetical protein; identified by GeneMark NP_207578.1 participates with LolB in the incorporation of lipoprotein into the outer membrane NP_207579.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins NP_207580.1 similar to GB:L42023 SP:P44252 PID:1007765 PID:1221702 PID:1205790 percent identity: 25.19; identified by sequence similarity NP_207581.1 hypothetical protein; identified by GeneMark NP_207582.1 hypothetical protein; identified by GeneMark NP_207583.1 similar to SP:P17222 GB:X52284 PID:42512 percent identity: 42.90; identified by sequence similarity NP_207584.1 similar to PID:1160605 GB:AE000511 SP:Q59465 PID:2313920 percent identity: 100.00; identified by sequence similarity NP_207585.1 similar to PID:1160605 GB:AE000511 PID:2313921 percent identity: 100.00; identified by sequence similarity NP_207586.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) NP_207587.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates NP_207588.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer NP_207589.1 similar to GB:AE000511 PID:2313927 percent identity: 100.00; identified by sequence similarity NP_207590.1 similar to GB:X61574 PID:732736 PID:1054732 PID:1016283 GB:AE000511 percent identity: 100.00; identified by sequence similarity NP_207591.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis NP_207592.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis NP_207593.1 similar to GP:1480153 percent identity: 31.13; identified by sequence similarity NP_207594.1 similar to SP:P30748 PID:42011 GB:U00096 PID:1651357 PID:1787002 percent identity: 36.67; identified by sequence similarity NP_207595.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate NP_207596.1 hypothetical protein; identified by GeneMark NP_207597.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate NP_207598.1 similar to GB:U05670 percent identity: 36.89; identified by sequence similarity NP_207599.1 hypothetical protein; identified by GeneMark NP_207600.1 similar to SP:P13036 GB:M20981 GB:M26397 GB:M63115 PID:145922 percent identity: 28.53; identified by sequence similarity NP_207601.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids NP_207602.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring NP_207603.1 similar to SP:P10120 GB:U00039 GB:X04398 PID:41497 PID:466601 percent identity: 31.02; identified by sequence similarity NP_207604.1 hypothetical protein; identified by GeneMark NP_207605.1 hypothetical protein; identified by GeneMark NP_207606.1 similar to GB:U00011 PID:466827 SP:Q49649 percent identity: 32.47; identified by sequence similarity NP_207607.1 similar to SP:P30138 PID:396331 PID:414234 GB:U00096 PID:1790425 percent identity: 34.60; identified by sequence similarity NP_207608.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine NP_207609.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine NP_207610.1 hypothetical protein; identified by GeneMark NP_207611.1 similar to PID:1109685 SP:Q45461 GB:AL009126 percent identity: 31.94; identified by sequence similarity NP_207612.1 similar to PID:1109684 SP:Q45460 GB:AL009126 percent identity: 38.39; identified by sequence similarity NP_207613.1 hypothetical protein; identified by GeneMark NP_207614.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision NP_207615.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine NP_207616.1 similar to SP:Q10819 PID:1403419 PID:1403419 GB:AL123456 percent identity: 27.84; identified by sequence similarity NP_207617.1 similar to GB:J03294 SP:P14949 GB:X79976 PID:142520 PID:1770044 percent identity: 51.49; identified by sequence similarity NP_207618.1 similar to PID:1171125 SP:P52213 percent identity: 45.31; identified by sequence similarity NP_207619.1 similar to GB:U05670 percent identity: 39.20; identified by sequence similarity NP_207620.1 similar to PID:862465 PID:961511 percent identity: 46.84; identified by sequence similarity NP_207621.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 NP_207622.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate NP_207623.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA NP_207624.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis NP_207625.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine NP_207626.1 hypothetical protein; identified by GeneMark NP_207627.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains NP_207628.1 similar to SP:P05385 percent identity: 44.57; identified by sequence similarity NP_207629.1 hypothetical protein; identified by GeneMark NP_207630.1 hypothetical protein; identified by GeneMark NP_207631.1 hypothetical protein; identified by GeneMark NP_207632.1 similar to GB:M73494 percent identity: 23.27; identified by sequence similarity NP_207633.1 similar to PID:903371 PID:2323520 percent identity: 60.21; identified by sequence similarity NP_207634.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine NP_207635.1 hypothetical protein; identified by GeneMark NP_207636.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate NP_207637.1 similar to GB:Z22636 percent identity: 41.03; identified by sequence similarity NP_207638.1 catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP NP_207639.1 similar to SP:P10486 PID:41750 percent identity: 46.82; identified by sequence similarity NP_207641.1 similar to GB:L42023 PID:1003331 PID:1222133 PID:1204473 PID:1573175 percent identity: 36.99; identified by sequence similarity NP_207642.1 hypothetical protein; identified by GeneMark NP_207643.1 similar to SP:P10484 GB:X75452 PID:41748 PID:450688 percent identity: 54.42; identified by sequence similarity NP_207644.1 similar to GB:L77117 SP:Q57819 PID:1591081 percent identity: 37.25; identified by sequence similarity NP_207645.1 hypothetical protein; identified by GeneMark NP_207647.1 similar to SP:P45535 PID:606286 GB:U00096 PID:1789751 percent identity: 32.63; identified by sequence similarity NP_207648.1 similar to SP:P36959 percent identity: 31.76; identified by sequence similarity NP_207649.1 similar to PID:1245347 percent identity: 41.83; identified by sequence similarity NP_207650.1 hypothetical protein; identified by GeneMark NP_207651.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate NP_207652.1 similar to PID:882153 percent identity: 40.20; identified by sequence similarity NP_207653.1 similar to SP:P37420 GB:U06472 GB:X52093 PID:459160 percent identity: 32.73; identified by sequence similarity NP_207654.1 similar to GB:L42023 SP:P46452 PID:1161410 PID:1220701 PID:1204873 percent identity: 52.05; identified by sequence similarity NP_207655.1 hypothetical protein; identified by GeneMark NP_207656.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP NP_207657.1 hypothetical protein; identified by GeneMark NP_207658.1 hypothetical protein; identified by GeneMark NP_207659.1 catalyzes the formation of dUMP from dUTP NP_207660.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus NP_207661.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM NP_207662.1 hypothetical protein; identified by GeneMark NP_207663.1 plays a role in hydrogenase nickel cofactor insertion NP_207664.1 the hook connects flagellar basal body to the flagellar filament NP_207665.1 similar to GB:L19201 SP:P06282 GB:M11331 PID:145472 PID:305021 percent identity: 73.88; identified by sequence similarity NP_207666.1 similar to SP:P16680 GB:U14003 PID:147194 PID:536952 GB:U00096 percent identity: 61.11; identified by sequence similarity NP_207667.1 hypothetical protein; identified by GeneMark NP_207668.1 hypothetical protein; identified by GeneMark NP_207669.1 similar to GP:1561776 percent identity: 99.41; identified by sequence similarity NP_207670.1 similar to PID:1052770 percent identity: 27.60; identified by sequence similarity NP_207671.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity NP_207672.1 hypothetical protein; identified by GeneMark NP_207673.1 hypothetical protein; identified by GeneMark NP_207674.1 hypothetical protein; identified by GeneMark NP_207675.1 hypothetical protein; identified by GeneMark NP_207676.1 plays an essential role in ATP-dependent branch migration of the Holliday junction NP_207677.1 hypothetical protein; identified by GeneMark NP_207678.1 similar to GB:L42023 SP:P44958 PID:1006129 PID:1221073 PID:1205213 percent identity: 34.00; identified by sequence similarity NP_207679.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA NP_207680.1 similar to GB:Z26883 GB:S72494 PID:472942 SP:Q48258 percent identity: 94.73; identified by sequence similarity NP_207681.1 similar to GB:L42023 PID:1007215 PID:1221401 PID:1205512 SP:Q57243 percent identity: 34.29; identified by sequence similarity NP_207682.1 similar to SP:P15029 GB:M26397 PID:145927 PID:537129 GB:U00096 percent identity: 38.32; identified by sequence similarity NP_207683.1 similar to GP:1786701 percent identity: 35.18; identified by sequence similarity NP_207684.1 similar to PID:1063246 SP:P49851 GB:AL009126 percent identity: 34.48; identified by sequence similarity NP_207685.1 similar to PID:984581 GB:U00096 SP:Q47149 PID:1786419 percent identity: 39.08; identified by sequence similarity NP_207686.1 hypothetical protein; identified by GeneMark NP_207687.1 similar to GB:L42023 SP:P44041 PID:1005631 PID:1220796 PID:1204959 percent identity: 39.77; identified by sequence similarity NP_207688.1 hypothetical protein; identified by GeneMark NP_207689.1 Contingency gene; similar to GB:AE000511 PID:2314032 percent identity: 100.00; identified by sequence similarity NP_207690.1 hypothetical protein; identified by GeneMark NP_207691.1 similar to GB:M92282 SP:P42033 PID:142321 percent identity: 47.80; identified by sequence similarity NP_207692.1 similar to GB:L77117 SP:Q57653 PID:1498975 percent identity: 38.46; identified by sequence similarity NP_207693.1 similar to GB:L00674 PID:289235 percent identity: 41.44; identified by sequence similarity NP_207694.1 hypothetical protein; identified by GeneMark NP_207695.1 hypothetical protein; identified by GeneMark NP_207696.2 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA NP_207698.1 hypothetical protein; identified by GeneMark NP_207699.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod NP_207700.1 the hook connects flagellar basal body to the flagellar filament NP_207701.1 hypothetical protein; identified by GeneMark NP_207702.1 similar to GB:L42023 SP:P44414 PID:1003910 PID:1222446 PID:1204764 percent identity: 33.44; identified by sequence similarity NP_207703.1 similar to GB:L42023 SP:P44804 PID:1005514 PID:1220733 PID:1204900 percent identity: 33.79; identified by sequence similarity NP_207704.1 similar to GB:AE000511 PID:2314050 percent identity: 100.00; identified by sequence similarity NP_207705.1 similar to GB:AE000511 PID:2314047 percent identity: 100.00; identified by sequence similarity NP_207706.1 hypothetical protein; identified by GeneMark NP_207708.1 similar to PID:1052770 percent identity: 28.80; identified by sequence similarity NP_207710.1 hypothetical protein; identified by GeneMark NP_207711.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity NP_207712.1 similar to SP:P06967 GB:X00547 PID:41284 GB:U00096 PID:1787205 percent identity: 36.31; identified by sequence similarity NP_207713.1 similar to GB:M87647 SP:P23722 GB:X54520 PID:143317 PID:39633 percent identity: 46.20; identified by sequence similarity NP_207714.1 similar to GB:U05677 PID:471731 PID:984360 GB:AE000511 SP:P55981 percent identity: 29.13; identified by sequence similarity NP_207715.1 similar to GB:AE000511 PID:2313591 PID:2314070 percent identity: 100.00; identified by sequence similarity NP_207716.1 similar to GB:X60835 SP:P49172 PID:45686 percent identity: 37.74; identified by sequence similarity NP_207717.1 involved in a recombinational process of DNA repair, independent of the recBC complex NP_207718.1 catalyzes the modification of U13 in tRNA(Glu) NP_207719.1 metalloprotease NP_207720.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer NP_207721.1 similar to GB:L42023 SP:P45204 PID:1007535 PID:1221581 PID:1205674 percent identity: 39.85; identified by sequence similarity NP_207722.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate NP_207725.1 hypothetical protein; identified by GeneMark NP_207726.1 similar to PID:882671 SP:P55139 GB:U00096 PID:1789139 percent identity: 33.63; identified by sequence similarity NP_207727.1 hypothetical protein; identified by GeneMark NP_207728.1 similar to SP:P30848 GB:U14003 GB:M83089 PID:147357 PID:536955 percent identity: 29.15; identified by sequence similarity NP_207730.1 hypothetical protein; identified by GeneMark NP_207731.1 similar to SP:P42200 PID:666982 PID:1805431 GB:AL009126 percent identity: 46.95; identified by sequence similarity NP_207732.1 similar to SP:P42199 PID:666981 GB:AL009126 percent identity: 41.53; identified by sequence similarity NP_207733.1 similar to SP:P29743 PID:396388 GB:U00096 PID:1790487 percent identity: 32.96; identified by sequence similarity NP_207734.1 similar to GB:L42023 SP:P44917 PID:1005967 PID:1220986 PID:1205130 percent identity: 44.47; identified by sequence similarity NP_207735.1 similar to GB:L02948 SP:P29011 PID:145703 GB:U00096 PID:1651591 percent identity: 26.21; identified by sequence similarity NP_207736.1 similar to SP:P55654 PID:2182626 percent identity: 52.46; identified by sequence similarity NP_207738.1 similar to GB:L42023 SP:P44263 PID:1007823 PID:1221729 PID:1205818 percent identity: 35.88; identified by sequence similarity NP_207739.1 hypothetical protein; identified by GeneMark NP_207740.1 hypothetical protein; identified by GeneMark NP_207741.1 SPOUT methyltransferase; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA NP_207742.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits NP_207743.1 hypothetical protein; identified by GeneMark NP_207744.1 similar to PID:940146 GB:AE000512 percent identity: 38.46; identified by sequence similarity NP_207745.1 hypothetical protein; identified by GeneMark NP_207746.1 similar to GB:L42023 PID:1007227 PID:1221408 PID:1205518 SP:Q57431 percent identity: 32.73; identified by sequence similarity NP_207747.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein NP_207748.1 similar to SP:Q10786 PID:1403502 GB:AL123456 percent identity: 36.19; identified by sequence similarity NP_207749.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A NP_207750.1 hypothetical protein; identified by GeneMark NP_207751.1 similar to GB:L77117 PID:1591598 percent identity: 31.10; identified by sequence similarity NP_207752.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA NP_207753.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate NP_207754.1 similar to GB:L42023 SP:P43709 PID:1003209 PID:1222068 PID:1204411 percent identity: 56.34; identified by sequence similarity NP_207755.1 hypothetical protein; identified by GeneMark NP_207756.1 hypothetical protein; identified by GeneMark NP_207757.1 hypothetical protein; identified by GeneMark NP_207758.1 similar to GB:L18965 SP:P40983 percent identity: 29.07; identified by sequence similarity NP_207759.1 similar to GB:L42023 PID:1003784 PID:1222382 PID:1204700 PID:1573426 percent identity: 28.89; identified by sequence similarity NP_207760.1 similar to GB:M26073 SP:P13511 PID:141928 percent identity: 37.32; identified by sequence similarity NP_207761.1 similar to PID:773675 percent identity: 21.13; identified by sequence similarity NP_207762.1 hypothetical protein; identified by GeneMark NP_207763.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA NP_207764.1 hypothetical protein; identified by GeneMark NP_207765.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate NP_207766.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain NP_207767.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate NP_207768.1 similar to PID:1213605 percent identity: 29.41; identified by sequence similarity NP_207769.1 similar to PID:1200208 PID:1165284 PID:1196309 PID:1223603 PID:1234875 percent identity: 31.85; identified by sequence similarity NP_207770.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function NP_207771.1 similar to SP:P37764 PID:1208948 GB:U00096 PID:1552753 PID:1786373 percent identity: 57.38; identified by sequence similarity NP_207772.1 similar to GB:L42023 SP:P43913 PID:1003678 PID:1222325 PID:1204647 percent identity: 42.50; identified by sequence similarity NP_207773.1 hypothetical protein; identified by GeneMark NP_207774.1 similar to SP:P11666 PID:41424 PID:882453 GB:U00096 PID:1789291 percent identity: 32.82; identified by sequence similarity NP_207776.1 hypothetical protein; identified by GeneMark NP_207777.1 hypothetical protein; identified by GeneMark NP_207778.1 hypothetical protein; identified by GeneMark NP_207779.1 similar to GP:1800172 percent identity: 97.18; identified by sequence similarity NP_207780.1 similar to GP:1800173 percent identity: 93.35; identified by sequence similarity NP_207781.1 hypothetical protein; identified by GeneMark NP_207784.1 hypothetical protein; identified by GeneMark NP_207785.1 hypothetical protein; identified by GeneMark NP_207786.1 similar to GB:M54884 SP:P21891 PID:147548 PID:887844 GB:U00096 percent identity: 27.75; identified by sequence similarity NP_207787.1 hypothetical protein; identified by GeneMark NP_207788.1 similar to GP:1800173 percent identity: 93.35; identified by sequence similarity NP_207789.1 similar to GP:1800172 percent identity: 97.18; identified by sequence similarity NP_207791.1 similar to SP:P07175 GB:X05121 PID:142267 PID:39112 percent identity: 29.73; identified by sequence similarity NP_207792.1 hypothetical protein; identified by GeneMark NP_207793.1 hypothetical protein; identified by GeneMark NP_207796.1 hypothetical protein; identified by GeneMark NP_207797.1 similar to PID:1103907 SP:Q44346 percent identity: 27.33; identified by sequence similarity NP_207798.1 similar to GB:L25848 GB:X52093 PID:1177217 PID:439619 PID:1150644 percent identity: 33.91; identified by sequence similarity NP_207800.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate NP_207801.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors NP_207802.1 similar to PID:1161059 percent identity: 29.64; identified by sequence similarity NP_207803.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis NP_207804.1 Acts on the hydroxyl group at position 7 of the steroid frame NP_207805.1 hypothetical protein; identified by GeneMark NP_207806.1 similar to GB:M12299 SP:P06978 PID:473749 GB:U00096 PID:1736571 percent identity: 35.37; identified by sequence similarity NP_207807.1 similar to GB:X81802 SP:P39137 PID:559883 PID:1064806 GB:AL009126 percent identity: 41.72; identified by sequence similarity NP_207808.1 hypothetical protein; identified by GeneMark NP_207809.1 similar to PID:1109748 PID:881375 PID:2094772 percent identity: 52.86; identified by sequence similarity NP_207810.1 bifunctional enzyme involved in formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate and 2-C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP from 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; binds divalent cations NP_207811.1 similar to GB:X77249 PID:495276 percent identity: 28.44; identified by sequence similarity NP_207812.1 hypothetical protein; identified by GeneMark NP_207813.1 hypothetical protein; identified by GeneMark NP_207814.1 similar to GB:L42023 SP:P43735 PID:1007148 PID:1221366 PID:1205479 percent identity: 37.68; identified by sequence similarity NP_207815.1 similar to GB:L29452 SP:P40183 PID:987631 percent identity: 46.15; identified by sequence similarity NP_207816.1 similar to GB:L42023 SP:P45262 PID:1007831 PID:1221733 PID:1205822 percent identity: 33.90; identified by sequence similarity NP_207817.1 similar to PID:511113 percent identity: 39.86; identified by sequence similarity NP_207818.1 hypothetical protein; identified by GeneMark NP_207819.1 hypothetical protein; identified by GeneMark NP_207820.1 One of three proteins involved in switching the direction of the flagellar rotation NP_207821.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation NP_207822.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes NP_207824.1 similar to PID:1165254 percent identity: 36.33; identified by sequence similarity NP_207825.1 positive regulator of class III flagellar genes NP_207826.1 similar to GB:D26185 SP:P29252 PID:467468 GB:AL009126 percent identity: 34.56; identified by sequence similarity NP_207827.1 similar to GP:1806001 percent identity: 95.89; identified by sequence similarity NP_207828.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis NP_207829.1 hypothetical protein; identified by GeneMark NP_207830.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence NP_207831.1 membrane protein involved in the flagellar export apparatus NP_207832.1 hypothetical protein; identified by GeneMark NP_207833.1 similar to PID:929822 percent identity: 26.82; identified by sequence similarity NP_207834.1 similar to GP:1132531 percent identity: 30.63; identified by sequence similarity NP_207835.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA NP_207836.1 similar to SP:P03843 PID:42143 PID:606110 GB:U00096 PID:1789561 percent identity: 32.14; identified by sequence similarity NP_207838.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock NP_207839.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex NP_207840.1 similar to PID:642365 percent identity: 39.68; identified by sequence similarity NP_207841.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate NP_207842.1 hypothetical protein; identified by GeneMark NP_207843.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis NP_207844.1 blocks the formation of polar Z-ring septums NP_207845.1 hypothetical protein; identified by GeneMark NP_207846.1 hypothetical protein; identified by GeneMark NP_207847.1 hypothetical protein; identified by GeneMark NP_207848.1 hypothetical protein; identified by GeneMark NP_207849.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate NP_207850.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration NP_207851.1 mediates the export of protein precursors bearing twin-arginine signal peptides NP_207852.1 similar to GB:L42023 SP:P44560 PID:1003276 PID:1222105 PID:1204445 percent identity: 34.96; identified by sequence similarity NP_207853.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step NP_207854.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA NP_207855.1 hypothetical protein; identified by GeneMark NP_207856.1 hypothetical protein; identified by GeneMark NP_207857.1 similar to GP:1800185 percent identity: 41.27; identified by sequence similarity NP_207858.1 similar to GP:1653994 percent identity: 95.68; identified by sequence similarity NP_207859.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype NP_207860.1 similar to GP:1589774 percent identity: 98.58; identified by sequence similarity NP_207861.1 hypothetical protein; identified by GeneMark NP_207862.1 similar to GP:1477770 percent identity: 99.58; identified by sequence similarity NP_207863.1 similar to GB:L33259 PID:495028 GB:AE000511 SP:P55989 PID:2314221 percent identity: 100.00; identified by sequence similarity NP_207864.1 similar to GB:L33259 PID:495029 GB:AE000511 SP:Q48271 PID:2314224 percent identity: 100.00; identified by sequence similarity NP_207865.1 hypothetical protein; identified by GeneMark NP_207866.1 similar to GB:L31422 PID:551739 GB:AE000783 percent identity: 42.86; identified by sequence similarity NP_207867.1 hypothetical protein; identified by GeneMark NP_207868.1 similar to PID:732734 GB:AE000511 SP:Q48262 PID:2314223 percent identity: 100.00; identified by sequence similarity NP_207869.1 hypothetical protein; identified by GeneMark NP_207870.1 hypothetical protein; identified by GeneMark NP_207871.1 similar to GP:1653086 percent identity: 44.00; identified by sequence similarity NP_207872.1 hypothetical protein; identified by GeneMark NP_207873.1 similar to GB:L42023 SP:P44407 PID:1005423 PID:1221967 PID:551865 percent identity: 32.36; identified by sequence similarity NP_207874.1 hypothetical protein; identified by GeneMark NP_207875.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis NP_207876.1 hypothetical protein; identified by GeneMark NP_207877.1 similar to GB:X61684 PID:296626 PID:512519 SP:Q06803 PID:1567096 percent identity: 40.17; identified by sequence similarity NP_207878.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities NP_207879.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase NP_207880.1 hypothetical protein; identified by GeneMark NP_207881.1 similar to SP:P46889 PID:1004225 GB:U00096 PID:1651412 PID:1651418 percent identity: 39.78; identified by sequence similarity NP_207882.1 similar to SP:P17448 GB:X53027 PID:42889 PID:43305 GB:U00096 percent identity: 45.87; identified by sequence similarity NP_207883.1 similar to SP:P16439 PID:47677 percent identity: 35.48; identified by sequence similarity NP_207885.1 hypothetical protein; identified by GeneMark NP_207886.1 similar to GP:1800173 percent identity: 93.35; identified by sequence similarity NP_207887.1 similar to GP:1800172 percent identity: 97.18; identified by sequence similarity NP_207888.1 hypothetical protein; identified by GeneMark NP_207889.1 similar to GP:1786864 percent identity: 27.01; identified by sequence similarity NP_207890.1 similar to GB:L20897 GB:M87458 GB:X63694 GB:X68871 PID:145827 percent identity: 50.25; identified by sequence similarity NP_207891.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate NP_207892.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate NP_207893.1 similar to SP:P46016 PID:556607 percent identity: 29.21; identified by sequence similarity NP_207894.1 catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate NP_207895.1 similar to GB:X67815 SP:Q02972 PID:16269 percent identity: 43.97; identified by sequence similarity NP_207896.1 similar to PID:557192 percent identity: 28.68; identified by sequence similarity NP_207897.1 hypothetical protein; identified by GeneMark NP_207898.1 similar to GB:AE000511 PID:2314267 percent identity: 100.00; identified by sequence similarity NP_207899.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates NP_207900.1 similar to GP:1197392 percent identity: 46.97; identified by sequence similarity NP_207901.1 Couples the complete acetyl-CoA oxidation to aromatic ring reduction by the use of the low-potential electron shuttle ferredoxin NP_207902.1 Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin NP_207903.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide NP_207904.1 similar to GB:AE000511 PID:2314264 percent identity: 100.00; identified by sequence similarity NP_207905.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion NP_207906.1 hypothetical protein; identified by GeneMark NP_207907.1 hypothetical protein; identified by GeneMark NP_207908.1 similar to GP:1786864 percent identity: 32.34; identified by sequence similarity NP_207909.1 similar to GB:M28722 SP:P18956 PID:146133 PID:466583 PID:606382 percent identity: 53.21; identified by sequence similarity NP_207910.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook NP_207911.1 hypothetical protein; identified by GeneMark NP_207912.1 similar to GB:X81638 SP:P43420 PID:547481 percent identity: 36.42; identified by sequence similarity NP_207913.1 hypothetical protein; identified by GeneMark NP_207914.1 similar to GB:L13261 SP:P30856 GB:Z21496 PID:394720 PID:475995 percent identity: 40.35; identified by sequence similarity NP_207915.1 hypothetical protein; identified by GeneMark NP_207916.1 similar to PID:1063274 percent identity: 42.59; identified by sequence similarity NP_207917.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA NP_207920.1 similar to GB:M28819 SP:P18784 PID:145869 PID:882534 GB:U00096 percent identity: 29.66; identified by sequence similarity NP_207921.1 similar to GB:M28819 SP:P18783 PID:145868 PID:882535 GB:U00096 percent identity: 32.94; identified by sequence similarity NP_207922.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane NP_207923.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit NP_207924.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit NP_207925.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit NP_207926.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex NP_207927.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. NP_207928.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B' is part of the membrane proton channel. NP_207929.1 similar to GB:L34077 GB:X85964 PID:407375 PID:757761 PID:1163135 percent identity: 40.43; identified by sequence similarity NP_207930.1 similar to GB:D26185 SP:P37522 PID:467381 PID:580906 GB:AL009126 percent identity: 47.41; identified by sequence similarity NP_207931.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon NP_207932.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth NP_207933.1 hypothetical protein; identified by GeneMark NP_207934.1 hypothetical protein; identified by GeneMark NP_207938.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site NP_207939.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA NP_207940.1 Essential for efficient processing of 16S rRNA NP_207941.1 hypothetical protein; identified by GeneMark NP_207942.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity NP_207943.1 similar to SP:P37105 PID:2309080 GB:AL009126 percent identity: 41.44; identified by sequence similarity NP_207944.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain NP_207945.1 binds to flagellin and appears to stabilize flagellin during flagella assembly NP_207946.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis NP_207947.1 similar to GB:AE000511 PID:2314315 percent identity: 100.00; identified by sequence similarity NP_207948.1 similar to GB:AE000511 PID:2314316 percent identity: 100.00; identified by sequence similarity NP_207949.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate NP_207950.1 similar to GB:L42023 SP:P44088 PID:1006155 PID:1221089 PID:1205227 percent identity: 63.22; identified by sequence similarity NP_207951.1 similar to GB:L42023 PID:1004109 PID:1221906 PID:1204263 SP:P71335 percent identity: 29.79; identified by sequence similarity NP_207952.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group NP_207953.1 similar to SP:P33366 PID:405866 GB:U00096 PID:1788458 percent identity: 27.62; identified by sequence similarity NP_207954.1 hypothetical protein; identified by GeneMark NP_207955.1 similar to GP:886900 percent identity: 27.82; identified by sequence similarity NP_207956.1 similar to GB:L20800 PID:456034 PID:1845540 percent identity: 26.96; identified by sequence similarity NP_207957.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family NP_207958.1 hypothetical protein; identified by GeneMark NP_207959.1 similar to SP:P15078 GB:X52904 PID:41081 GB:U00096 PID:1651245 percent identity: 55.51; identified by sequence similarity NP_207960.1 similar to SP:P10345 PID:41572 GB:U00096 PID:1651370 PID:1787030 percent identity: 27.57; identified by sequence similarity NP_207961.1 similar to SP:P10345 PID:41572 GB:U00096 PID:1651370 PID:1787030 percent identity: 30.88; identified by sequence similarity NP_207962.1 similar to PID:1183884 GB:AL009126 percent identity: 51.90; identified by sequence similarity NP_207963.1 similar to PID:1183885 GB:AL009126 percent identity: 32.20; identified by sequence similarity NP_207964.1 hypothetical protein; identified by GeneMark NP_207965.1 similar to PID:1171339 percent identity: 49.62; identified by sequence similarity NP_207966.1 similar to GB:L77117 SP:Q57772 PID:1591045 percent identity: 40.61; identified by sequence similarity NP_207968.1 similar to GB:AE000511 PID:2314334 percent identity: 100.00; identified by sequence similarity NP_207969.1 similar to GB:U14003 SP:P09743 GB:M60917 PID:147309 PID:537224 percent identity: 55.46; identified by sequence similarity NP_207970.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose NP_207971.1 similar to SP:P39141 PID:558558 PID:1408507 GB:AL009126 percent identity: 33.16; identified by sequence similarity NP_207972.1 similar to GB:D90119 SP:P21191 GB:M97169 GB:S74031 PID:152648 percent identity: 29.06; identified by sequence similarity NP_207973.1 similar to GB:L42023 PID:1161425 PID:1161429 PID:1221508 PID:1205608 percent identity: 34.55; identified by sequence similarity NP_207974.1 similar to SP:P26235 PID:148316 percent identity: 26.57; identified by sequence similarity NP_207975.1 similar to GB:L77117 SP:Q58119 PID:1591425 percent identity: 23.50; identified by sequence similarity NP_207976.1 similar to GB:L42023 SP:P44535 PID:1003172 PID:1222047 PID:1204393 percent identity: 55.53; identified by sequence similarity NP_207977.1 similar to PID:2301259 PID:1655717 percent identity: 35.03; identified by sequence similarity NP_207978.1 hypothetical protein; identified by GeneMark NP_207980.1 similar to GB:L08471 SP:Q04797 GB:Z22554 PID:142828 PID:296147 percent identity: 45.67; identified by sequence similarity NP_207981.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG NP_207982.1 similar to GB:L42023 SP:P45042 PID:1006405 PID:1221223 PID:1205353 percent identity: 33.22; identified by sequence similarity NP_207983.1 similar to GP:1419559 percent identity: 72.53; identified by sequence similarity NP_207984.1 similar to SP:P40691 percent identity: 43.66; identified by sequence similarity NP_207986.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene NP_207987.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit NP_207988.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance NP_207989.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; fusion of rpoB and rpoC; beta and beta' subunits are part of the catalytic core which binds with a sigma factor to produce the holoenzyme NP_207990.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors NP_207991.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit NP_207992.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA NP_207993.1 binds directly to 23S ribosomal RNA NP_207994.1 Modulates Rho-dependent transcription termination NP_207995.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force NP_207996.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif NP_207997.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu NP_207998.1 similar to SP:P22638 PID:142020 percent identity: 26.18; identified by sequence similarity NP_207999.1 hypothetical protein; identified by GeneMark NP_208000.1 similar to GP:1518454 percent identity: 93.43; identified by sequence similarity NP_208002.1 similar to GP:1518452 percent identity: 98.25; identified by sequence similarity NP_208004.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 NP_208005.1 similar to GB:L42023 SP:P44584 PID:1003357 PID:1222154 PID:1204487 percent identity: 38.87; identified by sequence similarity NP_208006.1 similar to PID:666909 percent identity: 21.46; identified by sequence similarity NP_208007.1 hypothetical protein; identified by GeneMark NP_208008.1 similar to GB:L42023 SP:P44846 PID:1005668 PID:1220817 PID:1204977 percent identity: 31.91; identified by sequence similarity NP_208009.1 hypothetical protein; identified by GeneMark NP_208010.1 similar to GB:L42023 SP:P43845 PID:1005977 PID:1220991 PID:1205135 percent identity: 31.82; identified by sequence similarity NP_208012.1 similar to PID:1239982 SP:P54591 GB:AL009126 percent identity: 31.53; identified by sequence similarity NP_208013.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate NP_208014.1 similar to GB:L42023 PID:1006517 PID:1221287 PID:1205408 SP:Q57252 percent identity: 26.99; identified by sequence similarity NP_208015.1 hypothetical protein; identified by GeneMark NP_208016.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis NP_208017.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling NP_208018.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III NP_208019.1 similar to SP:P00120 GB:D32217 PID:511910 percent identity: 38.38; identified by sequence similarity NP_208020.1 hydrolyzes diadenosine polyphosphate NP_208021.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation. NP_208022.1 hypothetical protein; identified by GeneMark NP_208023.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA NP_208024.1 similar to GB:L42023 SP:P43776 PID:1007337 PID:1007585 PID:1221467 percent identity: 34.48; identified by sequence similarity NP_208025.1 hypothetical protein; identified by GeneMark NP_208026.1 similar to GP:1314584 percent identity: 29.03; identified by sequence similarity NP_208027.1 similar to GP:1788047 percent identity: 30.86; identified by sequence similarity NP_208028.1 hypothetical protein; identified by GeneMark NP_208029.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers NP_208030.1 formamide amidohydrolase; catalyzes the hydrolysis of formamide to formate NP_208032.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell NP_208033.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_208034.1 similar to SP:P46135 GB:U00096 PID:1787696 percent identity: 42.31; identified by sequence similarity NP_208035.1 similar to GB:AE000511 PID:2314407 percent identity: 100.00; identified by sequence similarity NP_208036.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit NP_208037.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA NP_208038.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 NP_208039.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA NP_208040.1 similar to GB:U14003 SP:P21499 PID:537020 GB:U00096 PID:1790622 percent identity: 36.03; identified by sequence similarity NP_208041.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate NP_208042.1 hypothetical protein; identified by GeneMark NP_208043.1 similar to GP:1736843 percent identity: 59.60; identified by sequence similarity NP_208044.1 similar to SP:P42061 PID:677945 GB:AL009126 percent identity: 28.71; identified by sequence similarity NP_208045.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_208046.1 similar to GB:J04423 SP:P12999 PID:145427 PID:490221 GB:U00096 percent identity: 32.12; identified by sequence similarity NP_208047.1 similar to GB:D16463 SP:P33582 GB:U01376 PID:431135 PID:606113 percent identity: 30.63; identified by sequence similarity NP_208048.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs NP_208049.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate NP_208050.1 similar to PIR:E22845 percent identity: 23.20; identified by sequence similarity NP_208051.1 similar to GP:1787364 percent identity: 47.87; identified by sequence similarity NP_208052.1 Catalyzes the transfer of electrons from NADH to ubiquinone NP_208053.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen NP_208054.1 Catalyzes the transfer of electrons from NADH to ubiquinone NP_208055.1 Catalyzes the transfer of electrons from NADH to quinone NP_208056.1 hypothetical protein; identified by GeneMark NP_208057.1 hypothetical protein; identified by GeneMark NP_208058.1 Catalyzes the transfer of electrons from NADH to ubiquinone NP_208059.1 Catalyzes the transfer of electrons from NADH to quinone NP_208060.1 Catalyzes the transfer of electrons from NADH to quinone NP_208061.1 Catalyzes the transfer of electrons from NADH to quinone NP_208062.1 Catalyzes the transfer of electrons from NADH to quinone NP_208063.1 Catalyzes the transfer of electrons from NADH to ubiquinone NP_208064.1 Catalyzes the transfer of electrons from NADH to quinone NP_208065.1 Catalyzes the transfer of electrons from NADH to quinone NP_208066.1 similar to GB:U09019 PID:508865 percent identity: 23.92; identified by sequence similarity NP_208067.1 similar to GB:M60873 SP:P26276 GB:S43866 PID:150994 percent identity: 39.00; identified by sequence similarity NP_208068.1 hypothetical protein; identified by GeneMark NP_208069.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis NP_208070.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate NP_208071.1 monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate NP_208072.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate NP_208073.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity NP_208074.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine NP_208075.1 hypothetical protein; identified by GeneMark NP_208076.1 similar to GB:L42023 SP:P44011 PID:1003930 PID:1222457 PID:1204774 percent identity: 36.78; identified by sequence similarity NP_208077.1 similar to GB:M68502 SP:P26093 PID:1573696 percent identity: 38.05; identified by sequence similarity NP_208078.1 similar to SP:P37904 GB:U00096 PID:1787295 percent identity: 37.50; identified by sequence similarity NP_208079.1 similar to GB:M73546 SP:P25052 PID:143729 GB:AL009126 percent identity: 34.65; identified by sequence similarity NP_208080.1 hypothetical protein; identified by GeneMark NP_208081.1 hypothetical protein; identified by GeneMark NP_208082.1 similar to SP:P24520 GB:X52093 percent identity: 28.00; identified by sequence similarity NP_208083.1 similar to SP:P30636 percent identity: 26.35; identified by sequence similarity NP_208084.1 is a component of the macrolide binding site in the peptidyl transferase center NP_208085.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme NP_208086.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination NP_208087.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 NP_208088.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA NP_208089.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif NP_208090.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 NP_208091.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn NP_208092.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase NP_208093.2 late assembly protein NP_208094.2 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance NP_208095.2 binds 5S rRNA along with protein L5 and L25 NP_208096.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance NP_208097.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit NP_208098.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif NP_208099.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 NP_208100.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel NP_208101.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase NP_208102.1 primary binding protein; helps mediate assembly; involved in translation fidelity NP_208103.1 one of the stabilizing components for the large ribosomal subunit NP_208104.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e NP_208105.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation NP_208106.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center NP_208107.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA NP_208108.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation NP_208109.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel NP_208110.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA NP_208111.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin NP_208112.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex NP_208113.1 similar to GB:L77117 PID:1592175 percent identity: 30.81; identified by sequence similarity NP_208114.1 hypothetical protein; identified by GeneMark NP_208115.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids NP_208116.1 hypothetical protein; identified by GeneMark NP_208117.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle NP_208118.1 hypothetical protein; identified by GeneMark NP_208119.1 hypothetical protein; identified by GeneMark NP_208120.1 similar to GB:M26073 SP:P13510 PID:141927 percent identity: 28.85; identified by sequence similarity NP_208121.1 similar to GB:M26073 SP:P13511 PID:141928 percent identity: 31.32; identified by sequence similarity NP_208122.1 similar to GB:L42023 SP:P44301 PID:1008817 PID:1205967 PID:1221892 percent identity: 41.75; identified by sequence similarity NP_208123.1 similar to GB:L42023 SP:P44302 PID:1008819 PID:1205968 PID:1221893 percent identity: 33.63; identified by sequence similarity NP_208124.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion NP_208125.1 hypothetical protein; identified by GeneMark NP_208126.1 hypothetical protein; identified by GeneMark NP_208127.2 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs NP_208128.1 hypothetical protein; identified by GeneMark NP_208129.1 similar to SP:P54455 PID:1303791 GB:AL009126 percent identity: 27.22; identified by sequence similarity NP_208130.1 Inhibits transcription at high concentrations of nickel NP_208131.1 similar to GB:L42023 SP:P43008 PID:1003404 PID:1222176 PID:1204510 percent identity: 46.76; identified by sequence similarity NP_208132.1 similar to GB:L42023 SP:P43009 PID:1003402 PID:1222175 PID:1204509 percent identity: 35.77; identified by sequence similarity NP_208133.1 similar to PID:973169 SP:Q51368 PID:1666536 percent identity: 37.22; identified by sequence similarity NP_208134.1 similar to GB:AE000511 PID:2313316 PID:2314516 GB:AE000511 PID:2313316 percent identity: 100.00; identified by sequence similarity NP_208135.1 similar to GB:L42023 SP:P43932 PID:1004212 PID:1221963 PID:1204314 percent identity: 49.11; identified by sequence similarity NP_208136.1 similar to SP:P27841 GB:M87049 GB:L11042 GB:U00096 PID:145577 percent identity: 26.32; identified by sequence similarity NP_208137.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway NP_208138.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate NP_208139.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine NP_208140.1 similar to GB:M63491 SP:P26647 PID:147298 PID:882548 GB:U00096 percent identity: 31.96; identified by sequence similarity NP_208141.1 hypothetical protein; identified by GeneMark NP_208142.1 similar to PID:559865 PID:1657989 percent identity: 40.62; identified by sequence similarity NP_208143.1 hypothetical protein; identified by GeneMark NP_208144.1 similar to GB:M22862 SP:P20590 PID:148945 percent identity: 62.50; identified by sequence similarity NP_208147.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide NP_208148.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate NP_208149.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine NP_208150.1 hypothetical protein; identified by GeneMark NP_208151.1 hypothetical protein; identified by GeneMark NP_208152.1 UbiA prenyltransferase catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin NP_208153.1 similar to GB:L15202 SP:P39695 PID:289262 PID:1303798 GB:AL009126 percent identity: 27.47; identified by sequence similarity NP_208154.1 unwinds double stranded DNA NP_208155.1 similar to GB:U14003 SP:P31806 PID:304912 PID:537008 GB:U00096 percent identity: 33.07; identified by sequence similarity NP_208156.1 similar to GB:S59000 PID:299502 percent identity: 24.86; identified by sequence similarity NP_208157.1 similar to PID:1209526 SP:Q47744 percent identity: 32.38; identified by sequence similarity NP_208158.1 similar to SP:P23191 GB:X56977 PID:44182 percent identity: 37.14; identified by sequence similarity NP_208159.1 similar to SP:P23192 GB:X56977 PID:44181 percent identity: 59.27; identified by sequence similarity NP_208160.1 similar to SP:P29568 percent identity: 32.96; identified by sequence similarity NP_208162.1 similar to GB:L25415 PID:496157 percent identity: 26.73; identified by sequence similarity NP_208163.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall NP_208164.1 functions in MreBCD complex in some organisms NP_208165.1 binds and unfolds substrates as part of the ClpXP protease NP_208166.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis NP_208167.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP NP_208168.2 binds to flagellin and appears to stabilize flagellin during flagella assembly NP_208169.1 similar to PID:1107833 percent identity: 25.53; identified by sequence similarity NP_208170.1 similar to GP:304908 percent identity: 43.94; identified by sequence similarity NP_208171.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate NP_208172.1 hypothetical protein; identified by GeneMark NP_208173.1 hypothetical protein; identified by GeneMark NP_208174.1 similar to GB:L77117 percent identity: 37.62; identified by sequence similarity NP_208175.1 hypothetical protein; identified by GeneMark NP_208176.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate NP_208177.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate NP_208178.1 3'-5' exonuclease of DNA polymerase III NP_208179.1 hypothetical protein; identified by GeneMark NP_208180.1 hypothetical protein; identified by GeneMark NP_208181.1 hypothetical protein; identified by GeneMark NP_208182.1 hypothetical protein; identified by GeneMark NP_208183.1 similar to GB:L28919 PID:496254 percent identity: 25.71; identified by sequence similarity NP_208184.1 similar to GB:L42023 SP:P44496 PID:1003044 PID:1221978 PID:1204328 percent identity: 28.27; identified by sequence similarity NP_208185.1 similar to GB:L77117 PID:1591590 percent identity: 33.61; identified by sequence similarity NP_208186.1 similar to GB:AE000511 PID:2314569 percent identity: 100.00; identified by sequence similarity NP_208187.1 hypothetical protein; identified by GeneMark NP_208188.1 hypothetical protein; identified by GeneMark NP_208189.1 similar to GB:L20916 SP:Q08352 PID:299163 PID:1665852 GB:AL009126 percent identity: 39.55; identified by sequence similarity NP_208190.1 similar to GB:X81802 SP:P39138 PID:550313 PID:1064805 GB:AL009126 percent identity: 31.80; identified by sequence similarity NP_208191.1 similar to SP:P13036 GB:M20981 GB:M26397 GB:M63115 PID:145922 percent identity: 26.32; identified by sequence similarity NP_208192.1 similar to GB:L77117 SP:Q58610 PID:1591842 percent identity: 27.47; identified by sequence similarity NP_208193.1 similar to SP:P10486 PID:41750 percent identity: 26.72; identified by sequence similarity NP_208194.1 similar to SP:P10484 GB:X75452 PID:41748 PID:450688 percent identity: 37.08; identified by sequence similarity NP_208195.1 similar to GB:L77117 percent identity: 26.77; identified by sequence similarity NP_208197.1 catalyzes the formation of biotin from dethiobiotin and sulfur NP_208198.1 similar to GB:L42023 SP:P44608 PID:1003448 PID:1222202 PID:1204532 percent identity: 22.36; identified by sequence similarity NP_208200.1 hypothetical protein; identified by GeneMark NP_208201.1 hypothetical protein; identified by GeneMark NP_208202.1 hypothetical protein; identified by GeneMark NP_208203.1 hypothetical protein; identified by GeneMark NP_208204.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis NP_208205.1 similar to GB:L42023 SP:P44471 PID:1004168 PID:1221939 PID:1204292 percent identity: 27.37; identified by sequence similarity NP_208206.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity NP_208207.1 similar to SP:P27129 GB:M80599 PID:912479 PID:146657 GB:U00096 percent identity: 29.21; identified by sequence similarity NP_208209.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis NP_208210.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus NP_208211.1 involved in type III protein export during flagellum assembly NP_208212.1 similar to GP:1800162 percent identity: 30.69; identified by sequence similarity NP_208213.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 1 subfamily; some organisms carry two different copies of this enzyme NP_208214.1 similar to GB:D26185 SP:P37557 PID:467448 GB:AL009126 percent identity: 40.28; identified by sequence similarity NP_208215.1 hypothetical protein; identified by GeneMark NP_208219.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance NP_208220.1 similar to GB:L42023 SP:P45313 PID:1008004 PID:1205908 PID:1221828 percent identity: 45.95; identified by sequence similarity NP_208221.1 similar to GP:1377831 percent identity: 38.11; identified by sequence similarity NP_208222.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin NP_208224.1 hypothetical protein; identified by GeneMark NP_208225.1 similar to SP:Q03432 GB:L42023 PID:1007827 PID:1221731 PID:1205820 percent identity: 49.10; identified by sequence similarity NP_208226.1 similar to GP:1655731 percent identity: 41.70; identified by sequence similarity NP_208227.1 hypothetical protein; identified by GeneMark NP_208228.1 hypothetical protein; identified by GeneMark NP_208229.1 similar to PID:587474 PID:805099 PID:805107 PID:805111 percent identity: 32.00; identified by sequence similarity NP_208231.1 hypothetical protein; identified by GeneMark NP_208232.1 similar to SP:P29820 PID:46489 percent identity: 58.09; identified by sequence similarity NP_208233.1 affects carbohydrate metabolism, has regulatory role in many processes NP_208234.1 catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis NP_208235.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation NP_208236.1 similar to GB:L42023 SP:P43008 PID:1003404 PID:1222176 PID:1204510 percent identity: 45.14; identified by sequence similarity NP_208237.1 similar to GB:L42023 SP:P43009 PID:1003402 PID:1222175 PID:1204509 percent identity: 36.22; identified by sequence similarity NP_208238.1 in Escherichia coli transcription of this gene is enhanced by polyamines NP_208239.1 similar to GB:X62539 SP:P25814 GB:Z14225 PID:312728 PID:467389 percent identity: 29.31; identified by sequence similarity NP_208240.1 similar to GB:U10529 SP:P45649 PID:511458 percent identity: 38.98; identified by sequence similarity NP_208241.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria NP_208242.1 hypothetical protein; identified by GeneMark NP_208243.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE NP_208244.1 similar to GP:1800185 percent identity: 26.80; identified by sequence similarity NP_208245.1 hypothetical protein; identified by GeneMark NP_208246.1 hypothetical protein; identified by GeneMark NP_208247.1 similar to PID:560004 SP:P53436 GB:AE000511 PID:2314629 GB:AE001439 percent identity: 100.00; identified by sequence similarity NP_208248.1 hypothetical protein; identified by GeneMark NP_208249.1 similar to GB:Z35473 PID:1388082 PID:992960 percent identity: 38.27; identified by sequence similarity NP_208250.1 similar to GB:L09228 SP:P35159 PID:410137 GB:AL009126 percent identity: 30.09; identified by sequence similarity NP_208251.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase NP_208252.1 similar to PID:887791 percent identity: 48.45; identified by sequence similarity NP_208253.1 similar to GP:1419557 percent identity: 96.15; identified by sequence similarity NP_208254.1 hypothetical protein; identified by GeneMark NP_208255.1 similar to GP:1001514 percent identity: 27.38; identified by sequence similarity NP_208256.1 similar to GB:L42023 SP:P45031 PID:1006372 PID:1221204 PID:1205337 percent identity: 37.79; identified by sequence similarity NP_208257.1 similar to GB:L42023 SP:P45030 PID:1006370 PID:1221203 PID:1205336 percent identity: 30.88; identified by sequence similarity NP_208258.1 hypothetical protein; identified by GeneMark NP_208259.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids NP_208260.1 similar to GB:AE000511 PID:2314664 percent identity: 100.00; identified by sequence similarity NP_208261.1 similar to SP:P80194 GB:D32013 SP:P19821 GB:J04639 PID:155129 percent identity: 39.97; identified by sequence similarity NP_208262.1 Contingency gene; similar to GB:L17341 SP:Q07606 PID:304141 percent identity: 29.18; identified by sequence similarity NP_208263.1 similar to GB:L17341 SP:Q07605 PID:304140 percent identity: 32.45; identified by sequence similarity NP_208264.1 hypothetical protein; identified by GeneMark NP_208265.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP) NP_208266.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA NP_208267.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate NP_208268.1 required for the assembly of the flagellar basal body P-ring NP_208269.1 similar to PID:148951 percent identity: 35.34; identified by sequence similarity NP_208270.1 hypothetical protein; identified by GeneMark NP_208271.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA NP_208272.1 hypothetical protein; identified by GeneMark NP_208273.1 catalyzes the bidirectional exonucleolytic cleavage of DNA NP_208274.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone NP_208275.1 similar to PID:1162968 PID:1162969 PID:1162970 percent identity: 40.52; identified by sequence similarity NP_208276.1 similar to GB:L42023 SP:P44842 PID:1005653 PID:1220808 PID:1204970 percent identity: 35.23; identified by sequence similarity NP_208277.1 similar to GB:U00039 SP:P31993 PID:466621 PID:903728 GB:U00096 percent identity: 23.82; identified by sequence similarity NP_208278.1 similar to GB:M97208 SP:P32399 PID:143047 PID:2226234 GB:AL009126 percent identity: 30.68; identified by sequence similarity NP_208279.1 similar to SP:P37626 PID:466624 GB:U00096 PID:1789900 percent identity: 29.77; identified by sequence similarity NP_208280.1 similar to PID:1139569 percent identity: 21.69; identified by sequence similarity NP_208281.1 similar to GB:AL009126 percent identity: 39.91; identified by sequence similarity NP_208282.1 similar to GB:L42023 SP:P45268 PID:1007859 PID:1221747 PID:1205836 percent identity: 34.80; identified by sequence similarity NP_208283.1 similar to GP:1653754 percent identity: 48.21; identified by sequence similarity NP_208284.1 hypothetical protein; identified by GeneMark NP_208285.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate NP_208286.1 Important for the balance of metabolites in the pentose-phosphate pathway NP_208287.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response NP_208288.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation NP_208289.1 hypothetical protein; identified by GeneMark NP_208290.1 hypothetical protein; identified by GeneMark NP_208292.1 similar to GB:AE000511 PID:2314684 percent identity: 100.00; identified by sequence similarity NP_208293.1 hypothetical protein; identified by GeneMark NP_208294.1 similar to SP:P32113 percent identity: 30.27; identified by sequence similarity NP_208295.1 similar to GB:D26185 SP:P37543 PID:467424 GB:AL009126 percent identity: 23.87; identified by sequence similarity NP_208296.1 similar to GB:L42023 SP:P44326 PID:1006089 PID:1221052 PID:1205192 percent identity: 33.10; identified by sequence similarity NP_208297.1 similar to GB:L10328 SP:P19933 GB:D00626 GB:X17499 PID:216541 percent identity: 56.89; identified by sequence similarity NP_208298.1 similar to PID:1001103 PID:1001125 percent identity: 55.08; identified by sequence similarity NP_208299.1 similar to PID:1002882 percent identity: 29.38; identified by sequence similarity NP_208300.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX NP_208301.1 similar to PID:406425 percent identity: 30.65; identified by sequence similarity NP_208302.1 hypothetical protein; identified by GeneMark NP_208303.1 similar to PID:1052770 percent identity: 26.59; identified by sequence similarity NP_208304.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis NP_208305.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination NP_208307.1 hypothetical protein; identified by GeneMark NP_208308.1 similar to GB:M74821 SP:P25239 GB:X61122 PID:145139 PID:41321 percent identity: 26.74; identified by sequence similarity NP_208309.1 hypothetical protein; identified by GeneMark NP_208312.1 similar to SP:P40815 percent identity: 33.12; identified by sequence similarity NP_208313.1 catalyzes branch migration in Holliday junction intermediates NP_208314.1 hypothetical protein; identified by GeneMark NP_208315.1 hypothetical protein; identified by GeneMark NP_208316.1 AP endonuclease xth family; multifunctional DNA repair protein; has AP endonuclease, 3'-5' exonuclease, ribonuclease H, and 3'-phosphomonoesterase activities. NP_208317.1 hypothetical protein; identified by GeneMark NP_208319.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. NP_208320.1 similar to GP:1638807 percent identity: 20.67; identified by sequence similarity NP_208321.1 hypothetical protein; identified by GeneMark NP_208322.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source NP_208323.1 flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor NP_208324.1 similar to GP:1800173 percent identity: 93.35; identified by sequence similarity NP_208326.1 similar to GP:1800172 percent identity: 97.18; identified by sequence similarity NP_208328.1 hypothetical protein; identified by GeneMark NP_208330.1 similar to GB:J03176 PID:152084 SP:P51131 percent identity: 39.09; identified by sequence similarity NP_208331.1 similar to GB:J03176 PID:152083 SP:P51130 percent identity: 39.22; identified by sequence similarity NP_208332.1 similar to GB:L42023 SP:P45128 PID:1007188 PID:1221387 PID:1205499 percent identity: 37.66; identified by sequence similarity NP_208333.1 hypothetical protein; identified by GeneMark NP_208334.1 similar to GB:U07173 PID:460955 PID:1100877 percent identity: 37.15; identified by sequence similarity NP_208335.1 similar to GB:U07173 PID:460955 PID:1100877 percent identity: 31.25; identified by sequence similarity NP_208336.1 similar to GB:L42023 SP:P43775 PID:1007194 PID:1221390 PID:1205502 percent identity: 35.17; identified by sequence similarity NP_208337.1 hypothetical protein; identified by GeneMark NP_208338.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase NP_208339.1 similar to PID:1230580 PID:1230577 PID:2244691 percent identity: 30.59; identified by sequence similarity NP_208340.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF NP_208341.2 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane NP_208342.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex NP_208343.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH NP_208344.1 similar to GB:M63176 PID:153062 SP:Q53727 percent identity: 32.58; identified by sequence similarity NP_208345.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit NP_208346.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu NP_208347.1 similar to GB:L09703 SP:Q07868 PID:304165 PID:397894 PID:1122762 percent identity: 30.65; identified by sequence similarity NP_208348.1 forms a junction between the M-ring and FlgB during flagella biosynthesis NP_208349.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod NP_208350.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella NP_208351.1 similar to GB:D10483 SP:P16457 GB:M30807 PID:146039 PID:216503 percent identity: 30.24; identified by sequence similarity NP_208352.1 similar to PID:1107531 percent identity: 27.52; identified by sequence similarity NP_208353.1 similar to PID:1107531 percent identity: 28.17; identified by sequence similarity NP_208354.1 similar to GB:M55507 SP:P21762 PID:499094 GB:AE000511 PID:2314747 percent identity: 100.00; identified by sequence similarity NP_208355.1 similar to SP:Q08868 PID:150508 PID:349530 percent identity: 39.85; identified by sequence similarity NP_208356.1 similar to GB:L42023 SP:P44469 PID:1004164 PID:1221936 PID:1204290 percent identity: 35.04; identified by sequence similarity NP_208357.1 hypothetical protein; identified by GeneMark NP_208358.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential NP_208359.1 hypothetical protein; identified by GeneMark NP_208360.1 hypothetical protein; identified by GeneMark NP_208361.1 similar to GB:L42023 SP:P45314 PID:1008006 PID:1205909 PID:1221829 percent identity: 40.52; identified by sequence similarity NP_208362.1 similar to GB:L42023 PID:1004160 PID:1221934 PID:1204288 SP:Q57092 percent identity: 37.63; identified by sequence similarity NP_208363.1 similar to GP:1552781 percent identity: 31.87; identified by sequence similarity NP_208364.1 similar to GB:D26185 SP:P37545 PID:467428 GB:AL009126 percent identity: 42.23; identified by sequence similarity NP_208365.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine NP_208366.1 similar to GP:2440007 percent identity: 40.51; identified by sequence similarity NP_208367.1 part of the metNIQ transport system for methionine NP_208368.1 similar to SP:P31547 PID:1208965 PID:303561 GB:U00096 PID:1552774 percent identity: 43.06; identified by sequence similarity NP_208369.1 similar to PID:765060 percent identity: 27.18; identified by sequence similarity NP_208370.1 hypothetical protein; identified by GeneMark NP_208371.1 hypothetical protein; identified by GeneMark NP_208372.1 similar to GB:D21131 PID:531265 percent identity: 29.17; identified by sequence similarity NP_208373.1 involved in the de novo synthesis of pyridoxine (Vitamin B6) NP_208374.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) NP_208375.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity NP_208376.1 makes up the distal portion of the flagellar basal body rod NP_208379.1 similar to GB:X67700 PID:41759 GB:U00096 PID:1786193 percent identity: 32.31; identified by sequence similarity NP_208381.1 hypothetical protein; identified by GeneMark