-- dump date 20140619_113049 -- class Genbank::CDS -- table cds_note -- id note YP_005766102.1 COG0781 Transcription termination factor YP_005766103.1 COG0054 Riboflavin synthase beta-chain YP_005766104.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_005766105.1 COG0288 Carbonic anhydrase YP_005766106.1 COG0284 Orotidine-5'-phosphate decarboxylase YP_005766107.1 COG0414 Panthothenate synthetase YP_005766109.1 COG0459 Chaperonin GroEL (HSP60 family) YP_005766110.1 COG0234 Co-chaperonin GroES (HSP10) YP_005766111.1 COG0358 DNA primase (bacterial type) YP_005766112.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005766116.1 COG3451 Type IV secretory pathway, VirB4 components YP_005766117.1 COG3014 Uncharacterized protein conserved in bacteria YP_005766118.1 COG0835 Chemotaxis signal transduction protein YP_005766119.1 COG0019 Diaminopimelate decarboxylase YP_005766120.1 COG0671 Membrane-associated phospholipid phosphatase YP_005766121.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_005766124.1 COG0372 Citrate synthase YP_005766125.1 COG0538 Isocitrate dehydrogenases YP_005766127.1 COG0132 Dethiobiotin synthetase YP_005766128.1 COG0464 ATPases of the AAA+ class YP_005766129.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_005766130.1 COG2127 Uncharacterized conserved protein YP_005766131.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005766132.1 COG0853 Aspartate 1-decarboxylase YP_005766133.1 COG0718 Uncharacterized protein conserved in bacteria YP_005766134.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005766136.1 COG3736 Type IV secretory pathway, component VirB8 YP_005766137.1 COG3504 Type IV secretory pathway, VirB9 components YP_005766138.1 COG2948 Type IV secretory pathway, VirB10 components YP_005766139.1 COG0836 Mannose-1-phosphate guanylyltransferase YP_005766140.1 COG1089 GDP-D-mannose dehydratase YP_005766141.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005766142.1 COG0309 Hydrogenase maturation factor YP_005766143.1 COG0068 Hydrogenase maturation factor YP_005766144.1 COG2957 Peptidylarginine deiminase and related enzymes YP_005766145.1 COG0863 DNA modification methylase YP_005766146.1 COG0270 Site-specific DNA methylase YP_005766149.1 COG2189 Adenine specific DNA methylase Mod YP_005766153.1 COG0591 Na+/proline symporter YP_005766154.1 COG0506 Proline dehydrogenase YP_005766158.1 COG0829 Urease accessory protein UreH YP_005766159.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_005766160.1 COG0830 Urease accessory protein UreF YP_005766161.1 COG2371 Urease accessory protein UreE YP_005766162.1 COG1138 Cytochrome c biogenesis factor YP_005766163.1 COG0804 Urea amidohydrolase (urease) alpha subunit YP_005766164.1 COG0831 Urea amidohydrolase (urease) gamma subunit YP_005766165.1 COG0597 Lipoprotein signal peptidase YP_005766166.1 COG1109 Phosphomannomutase YP_005766167.1 COG0268 Ribosomal protein S20 YP_005766168.1 COG0216 Protein chain release factor A YP_005766172.1 COG0840 Methyl-accepting chemotaxis protein YP_005766173.1 COG0103 Ribosomal protein S9 YP_005766174.1 COG0102 Ribosomal protein L13 YP_005766176.1 COG0579 Predicted dehydrogenase YP_005766177.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_005766178.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005766179.1 COG0775 Nucleoside phosphorylase YP_005766180.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005766181.1 COG3839 ABC-type sugar transport systems, ATPase components YP_005766182.1 COG0863 DNA modification methylase YP_005766184.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_005766186.1 COG0498 Threonine synthase YP_005766187.1 COG0840 Methyl-accepting chemotaxis protein YP_005766188.1 COG1636 Uncharacterized protein conserved in bacteria YP_005766190.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005766191.1 COG0840 Methyl-accepting chemotaxis protein YP_005766192.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_005766193.1 COG1854 LuxS protein involved in autoinducer AI2 synthesis YP_005766194.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_005766195.1 COG0031 Cysteine synthase YP_005766197.1 COG0443 Molecular chaperone YP_005766198.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_005766199.1 COG1420 Transcriptional regulator of heat shock gene YP_005766200.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_005766202.1 COG2604 Uncharacterized protein conserved in bacteria YP_005766203.1 COG1344 Flagellin and related hook-associated proteins YP_005766204.1 COG0550 Topoisomerase IA YP_005766205.1 COG0731 Fe-S oxidoreductases YP_005766207.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_005766209.1 COG0441 Threonyl-tRNA synthetase YP_005766210.1 COG0290 Translation initiation factor 3 (IF-3) YP_005766211.1 COG0291 Ribosomal protein L35 YP_005766212.1 COG0292 Ribosomal protein L20 YP_005766217.1 COG1760 L-serine deaminase YP_005766218.1 COG0814 Amino acid permeases YP_005766220.1 COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_005766222.1 COG1225 Peroxiredoxin YP_005766223.1 COG1556 Uncharacterized conserved protein YP_005766224.1 COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain YP_005766225.1 COG0247 Fe-S oxidoreductase YP_005766226.1 COG1620 L-lactate permease YP_005766227.1 COG1620 L-lactate permease YP_005766228.1 COG1194 A/G-specific DNA glycosylase YP_005766229.1 COG0471 Di- and tricarboxylate transporters YP_005766230.1 COG3278 Cbb3-type cytochrome oxidase, subunit 1 YP_005766231.1 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit YP_005766233.1 COG2010 Cytochrome c, mono- and diheme variants YP_005766236.1 COG0443 Molecular chaperone YP_005766239.1 COG2107 Predicted periplasmic solute-binding protein YP_005766240.1 COG0468 RecA/RadA recombinase YP_005766241.1 COG0148 Enolase YP_005766244.1 COG0703 Shikimate kinase YP_005766246.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005766247.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005766248.1 COG0217 Uncharacterized conserved protein YP_005766249.1 COG0113 Delta-aminolevulinic acid dehydratase YP_005766250.1 COG0642 Signal transduction histidine kinase YP_005766251.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005766253.1 COG0457 FOG: TPR repeat YP_005766254.1 COG0826 Collagenase and related proteases YP_005766256.1 COG1186 Protein chain release factor B YP_005766257.1 COG0303 Molybdopterin biosynthesis enzyme YP_005766258.1 COG1684 Flagellar biosynthesis pathway, component FliR YP_005766261.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005766262.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_005766263.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005766264.1 COG2089 Sialic acid synthase YP_005766265.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005766266.1 COG0815 Apolipoprotein N-acyltransferase YP_005766268.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_005766269.1 COG1190 Lysyl-tRNA synthetase (class II) YP_005766270.1 COG0112 Glycine/serine hydroxymethyltransferase YP_005766274.1 COG1479 Uncharacterized conserved protein YP_005766275.1 COG2862 Predicted membrane protein YP_005766276.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005766277.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_005766278.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_005766279.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_005766280.1 COG0149 Triosephosphate isomerase YP_005766281.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_005766282.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_005766295.1 COG5410 Uncharacterized protein conserved in bacteria YP_005766305.1 COG1196 Chromosome segregation ATPases YP_005766306.1 COG0358 DNA primase (bacterial type) YP_005766307.1 COG0467 RecA-superfamily ATPases implicated in signal transduction YP_005766309.1 COG0640 Predicted transcriptional regulators YP_005766312.1 COG0582 Integrase YP_005766315.1 COG0192 S-adenosylmethionine synthetase YP_005766316.1 COG0105 Nucleoside diphosphate kinase YP_005766318.1 COG0333 Ribosomal protein L32 YP_005766319.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_005766320.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_005766323.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005766324.1 COG0489 ATPases involved in chromosome partitioning YP_005766325.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005766332.1 COG3451 Type IV secretory pathway, VirB4 components YP_005766333.1 COG0550 Topoisomerase IA YP_005766335.1 COG3736 Type IV secretory pathway, component VirB8 YP_005766336.1 COG3504 Type IV secretory pathway, VirB9 components YP_005766337.1 COG2948 Type IV secretory pathway, VirB10 components YP_005766342.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005766346.1 COG3505 Type IV secretory pathway, VirD4 components YP_005766347.1 COG3041 Uncharacterized protein conserved in bacteria YP_005766349.1 COG3843 Type IV secretory pathway, VirD2 components (relaxase) YP_005766352.1 COG1192 ATPases involved in chromosome partitioning YP_005766357.1 COG0582 Integrase YP_005766358.1 COG0326 Molecular chaperone, HSP90 family YP_005766360.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005766361.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005766362.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_005766363.1 COG0471 Di- and tricarboxylate transporters YP_005766364.1 COG0575 CDP-diglyceride synthetase YP_005766365.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_005766366.1 COG1881 Phospholipid-binding protein YP_005766368.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005766369.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_005766371.1 COG1066 Predicted ATP-dependent serine protease YP_005766372.1 COG0225 Peptide methionine sulfoxide reductase YP_005766374.1 COG0730 Predicted permeases YP_005766378.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_005766379.1 COG0419 ATPase involved in DNA repair YP_005766380.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_005766381.1 COG1651 Protein-disulfide isomerase YP_005766383.1 COG0754 Glutathionylspermidine synthase YP_005766385.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005766386.1 COG2010 Cytochrome c, mono- and diheme variants YP_005766387.1 COG0181 Porphobilinogen deaminase YP_005766388.1 COG0442 Prolyl-tRNA synthetase YP_005766389.1 COG0373 Glutamyl-tRNA reductase YP_005766390.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005766391.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005766393.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_005766394.1 COG0642 Signal transduction histidine kinase YP_005766396.1 COG1706 Flagellar basal-body P-ring protein YP_005766397.1 COG0513 Superfamily II DNA and RNA helicases YP_005766398.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005766400.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_005766401.1 COG4239 ABC-type uncharacterized transport system, permease component YP_005766405.1 COG0104 Adenylosuccinate synthase YP_005766407.1 COG3334 Uncharacterized conserved protein YP_005766408.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_005766409.1 COG1570 Exonuclease VII, large subunit YP_005766410.1 COG2189 Adenine specific DNA methylase Mod YP_005766412.1 COG0863 DNA modification methylase YP_005766413.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005766414.1 COG0785 Cytochrome c biogenesis protein YP_005766415.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_005766416.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_005766418.1 COG0621 2-methylthioadenine synthetase YP_005766419.1 COG2121 Uncharacterized protein conserved in bacteria YP_005766423.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_005766424.1 COG0457 FOG: TPR repeat YP_005766425.1 COG0134 Indole-3-glycerol phosphate synthase YP_005766426.1 COG1145 Ferredoxin YP_005766427.1 COG0248 Exopolyphosphatase YP_005766428.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005766429.1 COG1560 Lauroyl/myristoyl acyltransferase YP_005766430.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_005766431.1 COG3400 Uncharacterized protein conserved in bacteria YP_005766432.1 COG0337 3-dehydroquinate synthetase YP_005766433.1 COG0668 Small-conductance mechanosensitive channel YP_005766434.1 COG0621 2-methylthioadenine synthetase YP_005766435.1 COG0465 ATP-dependent Zn proteases YP_005766439.1 COG1605 Chorismate mutase YP_005766440.1 COG4866 Uncharacterized conserved protein YP_005766441.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005766442.1 COG0388 Predicted amidohydrolase YP_005766443.1 COG1344 Flagellin and related hook-associated proteins YP_005766444.1 COG0261 Ribosomal protein L21 YP_005766445.1 COG0211 Ribosomal protein L27 YP_005766446.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005766447.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005766448.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005766449.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005766450.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005766451.1 COG0536 Predicted GTPase YP_005766454.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_005766457.1 COG0388 Predicted amidohydrolase YP_005766458.1 COG0726 Predicted xylanase/chitin deacetylase YP_005766460.1 COG0863 DNA modification methylase YP_005766461.1 COG3535 Uncharacterized conserved protein YP_005766462.1 COG0523 Putative GTPases (G3E family) YP_005766463.1 COG0477 Permeases of the major facilitator superfamily YP_005766464.1 COG0748 Putative heme iron utilization protein YP_005766465.1 COG0018 Arginyl-tRNA synthetase YP_005766466.1 COG1826 Sec-independent protein secretion pathway components YP_005766467.1 COG0194 Guanylate kinase YP_005766469.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005766471.1 COG2063 Flagellar basal body L-ring protein YP_005766472.1 COG1083 CMP-N-acetylneuraminic acid synthetase YP_005766473.1 COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase YP_005766474.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005766475.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_005766476.1 COG0171 NAD synthase YP_005766477.1 COG0059 Ketol-acid reductoisomerase YP_005766478.1 COG2894 Septum formation inhibitor-activating ATPase YP_005766479.1 COG0851 Septum formation topological specificity factor YP_005766480.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_005766481.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_005766483.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005766488.1 COG3326 Predicted membrane protein YP_005766491.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005766492.1 COG0608 Single-stranded DNA-specific exonuclease YP_005766493.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_005766494.1 COG0671 Membrane-associated phospholipid phosphatase YP_005766495.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein YP_005766496.1 COG1536 Flagellar motor switch protein YP_005766497.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_005766498.1 COG1154 Deoxyxylulose-5-phosphate synthase YP_005766499.1 COG0481 Membrane GTPase LepA YP_005766500.1 COG0270 Site-specific DNA methylase YP_005766502.1 COG4786 Flagellar basal body rod protein YP_005766503.1 COG0477 Permeases of the major facilitator superfamily YP_005766504.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005766505.1 COG2887 RecB family exonuclease YP_005766506.1 COG0021 Transketolase YP_005766507.1 COG0196 FAD synthase YP_005766508.1 COG1189 Predicted rRNA methylase YP_005766510.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_005766512.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005766514.1 COG1787 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes YP_005766515.1 COG3376 High-affinity nickel permease YP_005766521.1 COG2608 Copper chaperone YP_005766522.1 COG2217 Cation transport ATPase YP_005766523.1 COG1183 Phosphatidylserine synthase YP_005766525.1 COG0465 ATP-dependent Zn proteases YP_005766526.1 COG2264 Ribosomal protein L11 methylase YP_005766527.1 COG0784 FOG: CheY-like receiver YP_005766531.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_005766532.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_005766533.1 COG0805 Sec-independent protein secretion pathway component TatC YP_005766534.1 COG1826 Sec-independent protein secretion pathway components YP_005766535.1 COG0270 Site-specific DNA methylase YP_005766536.1 COG2255 Holliday junction resolvasome, helicase subunit YP_005766537.1 COG0413 Ketopantoate hydroxymethyltransferase YP_005766541.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005766542.1 COG0850 Septum formation inhibitor YP_005766543.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_005766544.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_005766545.1 COG0083 Homoserine kinase YP_005766546.1 COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination YP_005766547.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_005766548.1 COG0858 Ribosome-binding factor A YP_005766549.1 COG0779 Uncharacterized protein conserved in bacteria YP_005766550.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_005766551.1 COG1408 Predicted phosphohydrolases YP_005766552.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005766553.1 COG2404 Predicted phosphohydrolase (DHH superfamily) YP_005766554.1 COG1298 Flagellar biosynthesis pathway, component FlhA YP_005766555.1 COG0184 Ribosomal protein S15P/S13E YP_005766556.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_005766557.1 COG0757 3-dehydroquinate dehydratase II YP_005766558.1 COG0006 Xaa-Pro aminopeptidase YP_005766559.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_005766560.1 COG1419 Flagellar GTP-binding protein YP_005766561.1 COG0455 ATPases involved in chromosome partitioning YP_005766563.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005766564.1 COG1868 Flagellar motor switch protein YP_005766565.1 COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation YP_005766566.1 COG2731 Beta-galactosidase, beta subunit YP_005766567.1 COG4731 Uncharacterized protein conserved in bacteria YP_005766568.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_005766569.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase YP_005766570.1 COG0789 Predicted transcriptional regulators YP_005766571.1 COG2214 DnaJ-class molecular chaperone YP_005766573.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005766575.1 COG0784 FOG: CheY-like receiver YP_005766576.1 COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase YP_005766577.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005766578.1 COG0833 Amino acid transporters YP_005766579.1 COG0558 Phosphatidylglycerophosphate synthase YP_005766581.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005766582.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005766583.1 COG0612 Predicted Zn-dependent peptidases YP_005766584.1 COG0167 Dihydroorotate dehydrogenase YP_005766585.1 COG0855 Polyphosphate kinase YP_005766586.1 COG0732 Restriction endonuclease S subunits YP_005766587.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005766588.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005766590.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005766591.1 COG2604 Uncharacterized protein conserved in bacteria YP_005766594.1 COG2048 Heterodisulfide reductase, subunit B YP_005766596.1 COG1164 Oligoendopeptidase F YP_005766597.1 COG0475 Kef-type K+ transport systems, membrane components YP_005766599.1 COG0725 ABC-type molybdate transport system, periplasmic component YP_005766600.1 COG4149 ABC-type molybdate transport system, permease component YP_005766601.1 COG1118 ABC-type sulfate/molybdate transport systems, ATPase component YP_005766602.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005766604.1 COG0827 Adenine-specific DNA methylase YP_005766605.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005766606.1 COG1217 Predicted membrane GTPase involved in stress response YP_005766607.1 COG0338 Site-specific DNA methylase YP_005766610.1 COG0753 Catalase YP_005766615.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_005766616.1 COG0227 Ribosomal protein L28 YP_005766619.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005766620.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_005766622.1 COG0824 Predicted thioesterase YP_005766623.1 COG0733 Na+-dependent transporters of the SNF family YP_005766624.1 COG0733 Na+-dependent transporters of the SNF family YP_005766625.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_005766626.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005766629.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005766630.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005766632.1 COG0277 FAD/FMN-containing dehydrogenases YP_005766633.1 COG0289 Dihydrodipicolinate reductase YP_005766636.1 COG0174 Glutamine synthetase YP_005766637.1 COG0359 Ribosomal protein L9 YP_005766638.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_005766639.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_005766640.1 COG1159 GTPase YP_005766641.1 COG3034 Uncharacterized protein conserved in bacteria YP_005766642.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005766647.1 COG3505 Type IV secretory pathway, VirD4 components YP_005766648.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005766651.1 COG2948 Type IV secretory pathway, VirB10 components YP_005766652.1 COG3504 Type IV secretory pathway, VirB9 components YP_005766654.1 COG3736 Type IV secretory pathway, component VirB8 YP_005766666.1 COG0249 Mismatch repair ATPase (MutS family) YP_005766669.1 COG3451 Type IV secretory pathway, VirB4 components YP_005766672.1 COG1943 Transposase and inactivated derivatives YP_005766673.1 COG0675 Transposase and inactivated derivatives YP_005766677.1 COG0796 Glutamate racemase YP_005766678.1 COG1158 Transcription termination factor YP_005766679.1 COG0254 Ribosomal protein L31 YP_005766680.1 COG0313 Predicted methyltransferases YP_005766681.1 COG0566 rRNA methylases YP_005766685.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_005766686.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005766687.1 COG0236 Acyl carrier protein YP_005766688.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005766689.1 COG0828 Ribosomal protein S21 YP_005766692.1 COG3059 Predicted membrane protein YP_005766693.1 COG0253 Diaminopimelate epimerase YP_005766694.1 COG0628 Predicted permease YP_005766696.1 COG0012 Predicted GTPase, probable translation factor YP_005766697.1 COG0260 Leucyl aminopeptidase YP_005766698.1 COG0586 Uncharacterized membrane-associated protein YP_005766699.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_005766701.1 COG0698 Ribose 5-phosphate isomerase RpiB YP_005766702.1 COG1994 Zn-dependent proteases YP_005766703.1 COG0681 Signal peptidase I YP_005766704.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_005766705.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_005766707.1 COG4692 Predicted neuraminidase (sialidase) YP_005766708.1 COG0418 Dihydroorotase YP_005766709.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_005766711.1 COG1886 Flagellar motor switch/type III secretory pathway protein YP_005766712.1 COG0177 Predicted EndoIII-related endonuclease YP_005766713.1 COG1918 Fe2+ transport system protein A YP_005766715.1 COG1559 Predicted periplasmic solute-binding protein YP_005766717.1 COG1146 Ferredoxin YP_005766718.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit YP_005766719.1 COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit YP_005766720.1 COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit YP_005766721.1 COG5610 Predicted hydrolase (HAD superfamily) YP_005766723.1 COG1495 Disulfide bond formation protein DsbB YP_005766725.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005766726.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_005766727.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_005766728.1 COG0840 Methyl-accepting chemotaxis protein YP_005766730.1 COG1344 Flagellin and related hook-associated proteins YP_005766731.1 COG2231 Uncharacterized protein related to Endonuclease III YP_005766733.1 COG0407 Uroporphyrinogen-III decarboxylase YP_005766734.1 COG1538 Outer membrane protein YP_005766735.1 COG0845 Membrane-fusion protein YP_005766736.1 COG0841 Cation/multidrug efflux pump YP_005766737.1 COG0015 Adenylosuccinate lyase YP_005766739.1 COG0842 ABC-type multidrug transport system, permease component YP_005766740.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005766741.1 COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain YP_005766742.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_005766743.1 COG0835 Chemotaxis signal transduction protein YP_005766744.1 COG0173 Aspartyl-tRNA synthetase YP_005766745.1 COG0563 Adenylate kinase and related kinases YP_005766746.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_005766747.1 COG0221 Inorganic pyrophosphatase YP_005766748.1 COG1193 Mismatch repair ATPase (MutS family) YP_005766750.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_005766751.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005766752.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis YP_005766753.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_005766754.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005766755.1 COG1479 Uncharacterized conserved protein YP_005766756.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_005766757.1 COG1740 Ni,Fe-hydrogenase I small subunit YP_005766758.1 COG0374 Ni,Fe-hydrogenase I large subunit YP_005766759.1 COG1969 Ni,Fe-hydrogenase I cytochrome b subunit YP_005766760.1 COG0680 Ni,Fe-hydrogenase maturation factor YP_005766765.1 COG0603 Predicted PP-loop superfamily ATPase YP_005766766.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005766768.1 COG0778 Nitroreductase YP_005766769.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005766770.1 COG0762 Predicted integral membrane protein YP_005766771.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005766772.1 COG1210 UDP-glucose pyrophosphorylase YP_005766774.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_005766775.1 COG1027 Aspartate ammonia-lyase YP_005766776.1 COG1573 Uracil-DNA glycosylase YP_005766778.1 COG0560 Phosphoserine phosphatase YP_005766779.1 COG1528 Ferritin-like protein YP_005766780.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_005766781.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_005766782.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_005766783.1 COG0612 Predicted Zn-dependent peptidases YP_005766784.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_005766785.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005766787.1 COG0328 Ribonuclease HI YP_005766788.1 COG0571 dsRNA-specific ribonuclease YP_005766789.1 COG0082 Chorismate synthase YP_005766791.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005766792.1 COG0247 Fe-S oxidoreductase YP_005766793.1 COG4889 Predicted helicase YP_005766794.1 COG4889 Predicted helicase YP_005766796.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005766797.1 COG0582 Integrase YP_005766798.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005766799.1 COG0730 Predicted permeases YP_005766800.1 COG0673 Predicted dehydrogenases and related proteins YP_005766801.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005766804.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_005766806.1 COG1338 Flagellar biosynthesis pathway, component FliP YP_005766807.1 COG4772 Outer membrane receptor for Fe3+-dicitrate YP_005766808.1 COG0370 Fe2+ transport system protein B YP_005766809.1 COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB YP_005766810.1 COG0863 DNA modification methylase YP_005766812.1 COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB YP_005766813.1 COG0183 Acetyl-CoA acetyltransferase YP_005766814.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_005766815.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_005766817.1 COG2031 Short chain fatty acids transporter YP_005766818.1 COG3528 Uncharacterized protein conserved in bacteria YP_005766819.1 COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit YP_005766820.1 COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit YP_005766821.1 COG4647 Acetone carboxylase, gamma subunit YP_005766823.1 COG0818 Diacylglycerol kinase YP_005766824.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005766826.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_005766827.1 COG0178 Excinuclease ATPase subunit YP_005766829.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_005766831.1 COG1912 Uncharacterized conserved protein YP_005766832.1 COG1896 Predicted hydrolases of HD superfamily YP_005766833.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005766834.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_005766835.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_005766836.1 COG0802 Predicted ATPase or kinase YP_005766837.1 COG2812 DNA polymerase III, gamma/tau subunits YP_005766838.1 COG1279 Lysine efflux permease YP_005766841.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_005766842.1 COG2704 Anaerobic C4-dicarboxylate transporter YP_005766845.1 COG0042 tRNA-dihydrouridine synthase YP_005766846.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005766848.1 COG0621 2-methylthioadenine synthetase YP_005766849.1 COG0218 Predicted GTPase YP_005766850.1 COG1129 ABC-type sugar transport system, ATPase component YP_005766851.1 COG0621 2-methylthioadenine synthetase YP_005766852.1 COG2236 Predicted phosphoribosyltransferases YP_005766853.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_005766854.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_005766855.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_005766856.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005766857.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_005766858.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005766859.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_005766860.1 COG0772 Bacterial cell division membrane protein YP_005766861.1 COG1186 Protein chain release factor B YP_005766862.1 COG3596 Predicted GTPase YP_005766863.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005766864.1 COG3401 Fibronectin type 3 domain-containing protein YP_005766865.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_005766866.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005766867.1 COG2177 Cell division protein YP_005766868.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005766869.1 COG1334 Uncharacterized flagellar protein FlaG YP_005766870.1 COG1345 Flagellar capping protein YP_005766871.1 COG1516 Flagellin-specific chaperone FliS YP_005766873.1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 YP_005766875.1 COG0388 Predicted amidohydrolase YP_005766877.1 COG2056 Predicted permease YP_005766878.1 COG0534 Na+-driven multidrug efflux pump YP_005766879.1 COG1418 Predicted HD superfamily hydrolase YP_005766880.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_005766882.1 COG0552 Signal recognition particle GTPase YP_005766885.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_005766886.1 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A YP_005766887.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_005766889.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_005766890.1 COG2070 Dioxygenases related to 2-nitropropane dioxygenase YP_005766891.1 COG0162 Tyrosyl-tRNA synthetase YP_005766892.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005766893.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_005766894.1 COG0528 Uridylate kinase YP_005766895.1 COG1427 Predicted periplasmic solute-binding protein YP_005766896.1 COG1049 Aconitase B YP_005766897.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005766900.1 COG5022 Myosin heavy chain YP_005766901.1 COG2834 Outer membrane lipoprotein-sorting protein YP_005766902.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_005766903.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_005766906.1 COG0732 Restriction endonuclease S subunits YP_005766907.1 COG2217 Cation transport ATPase YP_005766908.1 COG0606 Predicted ATPase with chaperone activity YP_005766909.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005766910.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005766911.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_005766914.1 COG0315 Molybdenum cofactor biosynthesis enzyme YP_005766915.1 COG0521 Molybdopterin biosynthesis enzymes YP_005766916.1 COG0314 Molybdopterin converting factor, large subunit YP_005766917.1 COG1977 Molybdopterin converting factor, small subunit YP_005766918.1 COG0807 GTP cyclohydrolase II YP_005766920.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_005766921.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_005766922.1 COG1451 Predicted metal-dependent hydrolase YP_005766923.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_005766924.1 COG1580 Flagellar basal body-associated protein YP_005766925.1 COG0742 N6-adenine-specific methylase YP_005766928.1 COG1565 Uncharacterized conserved protein YP_005766929.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005766930.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_005766931.1 COG1291 Flagellar motor component YP_005766932.1 COG1360 Flagellar motor protein YP_005766934.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_005766935.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components YP_005766937.1 COG0322 Nuclease subunit of the excinuclease complex YP_005766938.1 COG0460 Homoserine dehydrogenase YP_005766939.1 COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase YP_005766940.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005766941.1 COG0492 Thioredoxin reductase YP_005766942.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_005766943.1 COG0724 RNA-binding proteins (RRM domain) YP_005766945.1 COG0356 F0F1-type ATP synthase, subunit a YP_005766946.1 COG0516 IMP dehydrogenase/GMP reductase YP_005766947.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005766948.1 COG0237 Dephospho-CoA kinase YP_005766949.1 COG0421 Spermidine synthase YP_005766951.1 COG1160 Predicted GTPases YP_005766952.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005766954.1 COG3018 Uncharacterized protein conserved in bacteria YP_005766956.1 COG2067 Long-chain fatty acid transport protein YP_005766957.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_005766958.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_005766961.1 COG0419 ATPase involved in DNA repair YP_005766963.1 COG1083 CMP-N-acetylneuraminic acid synthetase YP_005766964.1 COG2089 Sialic acid synthase YP_005766965.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005766966.1 COG0732 Restriction endonuclease S subunits YP_005766967.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005766968.1 COG0352 Thiamine monophosphate synthase YP_005766969.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_005766970.1 COG2145 Hydroxyethylthiazole kinase, sugar kinase family YP_005766971.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005766973.1 COG0671 Membrane-associated phospholipid phosphatase YP_005766974.1 COG2958 Uncharacterized protein conserved in bacteria YP_005766975.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005766976.1 COG0516 IMP dehydrogenase/GMP reductase YP_005766977.1 COG0279 Phosphoheptose isomerase YP_005766978.1 COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase YP_005766979.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005766980.1 COG0241 Histidinol phosphatase and related phosphatases YP_005766981.1 COG2836 Uncharacterized conserved protein YP_005766982.1 COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor YP_005766985.1 COG0756 dUTPase YP_005766986.1 COG0782 Transcription elongation factor YP_005766987.1 COG0763 Lipid A disaccharide synthetase YP_005766989.1 COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) YP_005766990.1 COG1749 Flagellar hook protein FlgE YP_005766991.1 COG2134 CDP-diacylglycerol pyrophosphatase YP_005766992.1 COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism YP_005766995.1 COG0753 Catalase YP_005766996.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005766997.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_005766998.1 COG1432 Uncharacterized conserved protein YP_005766999.1 COG2217 Cation transport ATPase YP_005767002.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_005767004.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_005767005.1 COG0215 Cysteinyl-tRNA synthetase YP_005767007.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_005767008.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005767009.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005767010.1 COG1607 Acyl-CoA hydrolase YP_005767011.1 COG3041 Uncharacterized protein conserved in bacteria YP_005767014.1 COG0409 Hydrogenase maturation factor YP_005767015.1 COG0298 Hydrogenase maturation factor YP_005767016.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_005767018.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_005767019.1 COG0280 Phosphotransacetylase YP_005767021.1 COG1843 Flagellar hook capping protein YP_005767022.1 COG1749 Flagellar hook protein FlgE YP_005767023.1 COG0827 Adenine-specific DNA methylase YP_005767024.1 COG0210 Superfamily I DNA and RNA helicases YP_005767028.1 COG1190 Lysyl-tRNA synthetase (class II) YP_005767029.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005767031.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_005767032.1 COG0670 Integral membrane protein, interacts with FtsH YP_005767033.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005767036.1 COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog YP_005767037.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_005767038.1 COG0585 Uncharacterized conserved protein YP_005767039.1 COG0501 Zn-dependent protease with chaperone function YP_005767040.1 COG0302 GTP cyclohydrolase I YP_005767041.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005767042.1 COG0496 Predicted acid phosphatase YP_005767044.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_005767045.1 COG0602 Organic radical activating enzymes YP_005767046.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005767049.1 COG0477 Permeases of the major facilitator superfamily YP_005767050.1 COG0765 ABC-type amino acid transport system, permease component YP_005767051.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005767052.1 COG0787 Alanine racemase YP_005767053.1 COG1115 Na+/alanine symporter YP_005767054.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_005767055.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_005767057.1 COG1757 Na+/H+ antiporter YP_005767060.1 COG1576 Uncharacterized conserved protein YP_005767061.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_005767062.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_005767063.1 COG1546 Uncharacterized protein (competence- and mitomycin-induced) YP_005767065.1 COG0778 Nitroreductase YP_005767066.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_005767067.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005767068.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_005767069.1 COG1579 Zn-ribbon protein, possibly nucleic acid-binding YP_005767070.1 COG0327 Uncharacterized conserved protein YP_005767071.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_005767072.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_005767073.1 COG0699 Predicted GTPases (dynamin-related) YP_005767074.1 COG0699 Predicted GTPases (dynamin-related) YP_005767075.1 COG0699 Predicted GTPases (dynamin-related) YP_005767076.1 COG3309 Uncharacterized virulence-associated protein D YP_005767078.1 COG3696 Putative silver efflux pump YP_005767079.1 COG0845 Membrane-fusion protein YP_005767081.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_005767083.1 COG0696 Phosphoglyceromutase YP_005767084.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_005767085.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005767086.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005767087.1 COG0849 Actin-like ATPase involved in cell division YP_005767088.1 COG0206 Cell division GTPase YP_005767089.1 COG0675 Transposase and inactivated derivatives YP_005767090.1 COG0675 Transposase and inactivated derivatives YP_005767091.1 COG0668 Small-conductance mechanosensitive channel YP_005767093.1 COG1570 Exonuclease VII, large subunit YP_005767097.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_005767099.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005767100.1 COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain YP_005767101.1 COG3676 Transposase and inactivated derivatives YP_005767103.1 COG0608 Single-stranded DNA-specific exonuclease YP_005767107.1 COG1166 Arginine decarboxylase (spermidine biosynthesis) YP_005767108.1 COG0438 Glycosyltransferase YP_005767109.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_005767110.1 COG0500 SAM-dependent methyltransferases YP_005767112.1 COG0143 Methionyl-tRNA synthetase YP_005767113.1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases YP_005767114.1 COG0668 Small-conductance mechanosensitive channel YP_005767116.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_005767118.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_005767120.1 COG0520 Selenocysteine lyase YP_005767121.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005767122.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_005767123.1 COG0073 EMAP domain YP_005767124.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_005767125.1 COG0761 Penicillin tolerance protein YP_005767126.1 COG0539 Ribosomal protein S1 YP_005767128.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_005767129.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_005767130.1 COG0325 Predicted enzyme with a TIM-barrel fold YP_005767131.1 COG2908 Uncharacterized protein conserved in bacteria YP_005767132.1 COG0835 Chemotaxis signal transduction protein YP_005767133.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_005767134.1 COG0835 Chemotaxis signal transduction protein YP_005767135.1 COG2077 Peroxiredoxin YP_005767136.1 COG0605 Superoxide dismutase YP_005767137.1 COG0500 SAM-dependent methyltransferases YP_005767138.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_005767140.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005767144.1 COG0501 Zn-dependent protease with chaperone function YP_005767145.1 COG2890 Methylase of polypeptide chain release factors YP_005767146.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_005767148.1 COG1333 ResB protein required for cytochrome c biosynthesis YP_005767149.1 COG2143 Thioredoxin-related protein YP_005767150.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_005767152.1 COG1385 Uncharacterized protein conserved in bacteria YP_005767154.1 COG0717 Deoxycytidine deaminase YP_005767155.1 COG0511 Biotin carboxyl carrier protein YP_005767156.1 COG0439 Biotin carboxylase YP_005767160.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_005767161.1 COG0208 Ribonucleotide reductase, beta subunit YP_005767162.1 COG2518 Protein-L-isoaspartate carboxylmethyltransferase YP_005767163.1 COG0795 Predicted permeases YP_005767164.1 COG0101 Pseudouridylate synthase YP_005767165.1 COG1087 UDP-glucose 4-epimerase YP_005767167.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_005767168.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005767169.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_005767170.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_005767171.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_005767172.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_005767173.1 COG0837 Glucokinase YP_005767174.1 COG1064 Zn-dependent alcohol dehydrogenases YP_005767175.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005767176.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005767179.1 COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit YP_005767180.1 COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit YP_005767181.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit YP_005767182.1 COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit YP_005767183.1 COG0015 Adenylosuccinate lyase YP_005767185.1 COG0556 Helicase subunit of the DNA excision repair complex YP_005767188.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005767190.1 COG0405 Gamma-glutamyltransferase YP_005767191.1 COG1256 Flagellar hook-associated protein YP_005767193.1 COG0270 Site-specific DNA methylase YP_005767196.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_005767198.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_005767199.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_005767201.1 COG0848 Biopolymer transport protein YP_005767202.1 COG0811 Biopolymer transport proteins YP_005767203.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_005767204.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005767205.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_005767206.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_005767208.1 COG0711 F0F1-type ATP synthase, subunit b YP_005767209.1 COG0711 F0F1-type ATP synthase, subunit b YP_005767210.1 COG1475 Predicted transcriptional regulators YP_005767211.1 COG1192 ATPases involved in chromosome partitioning YP_005767212.1 COG0340 Biotin-(acetyl-CoA carboxylase) ligase YP_005767213.1 COG0223 Methionyl-tRNA formyltransferase YP_005767214.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005767215.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005767216.1 COG4487 Uncharacterized protein conserved in bacteria YP_005767220.1 COG0335 Ribosomal protein L19 YP_005767221.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_005767222.1 COG0806 RimM protein, required for 16S rRNA processing YP_005767223.1 COG1837 Predicted RNA-binding protein (contains KH domain) YP_005767224.1 COG0228 Ribosomal protein S16 YP_005767225.1 COG0541 Signal recognition particle GTPase YP_005767226.1 COG0525 Valyl-tRNA synthetase YP_005767227.1 COG1699 Uncharacterized protein conserved in bacteria YP_005767228.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005767232.1 COG0345 Pyrroline-5-carboxylate reductase YP_005767233.1 COG2184 Protein involved in cell division YP_005767234.1 COG0319 Predicted metal-dependent hydrolase YP_005767235.1 COG0716 Flavodoxins YP_005767236.1 COG0586 Uncharacterized membrane-associated protein YP_005767237.1 COG3197 Uncharacterized protein, possibly involved in nitrogen fixation YP_005767238.1 COG0492 Thioredoxin reductase YP_005767239.1 COG0477 Permeases of the major facilitator superfamily YP_005767240.1 COG0166 Glucose-6-phosphate isomerase YP_005767242.1 COG1966 Carbon starvation protein, predicted membrane protein YP_005767243.1 COG0765 ABC-type amino acid transport system, permease component YP_005767244.1 COG0765 ABC-type amino acid transport system, permease component YP_005767245.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005767246.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005767248.1 COG0738 Fucose permease YP_005767249.1 COG2252 Permeases YP_005767253.1 COG0813 Purine-nucleoside phosphorylase YP_005767254.1 COG1015 Phosphopentomutase YP_005767255.1 COG1972 Nucleoside permease YP_005767256.1 COG1076 DnaJ-domain-containing proteins 1 YP_005767258.1 COG0477 Permeases of the major facilitator superfamily YP_005767259.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005767260.1 COG0475 Kef-type K+ transport systems, membrane components YP_005767261.1 COG0534 Na+-driven multidrug efflux pump YP_005767262.1 COG2814 Arabinose efflux permease YP_005767264.1 COG3338 Carbonic anhydrase YP_005767266.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_005767267.1 COG0124 Histidyl-tRNA synthetase YP_005767268.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005767271.1 COG0480 Translation elongation factors (GTPases) YP_005767272.1 COG0049 Ribosomal protein S7 YP_005767273.1 COG0048 Ribosomal protein S12 YP_005767274.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005767276.1 COG0222 Ribosomal protein L7/L12 YP_005767277.1 COG0244 Ribosomal protein L10 YP_005767278.1 COG0081 Ribosomal protein L1 YP_005767279.1 COG0080 Ribosomal protein L11 YP_005767280.1 COG0250 Transcription antiterminator YP_005767281.1 COG0690 Preprotein translocase subunit SecE YP_005767282.1 COG0267 Ribosomal protein L33 YP_005767283.1 COG0050 GTPases - translation elongation factors YP_005767284.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005767285.1 COG0546 Predicted phosphatases YP_005767286.1 COG3392 Adenine-specific DNA methylase YP_005767288.1 COG1045 Serine acetyltransferase YP_005767289.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_005767290.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_005767291.1 COG1926 Predicted phosphoribosyltransferases YP_005767292.1 COG1452 Organic solvent tolerance protein OstA YP_005767294.1 COG0151 Phosphoribosylamine-glycine ligase YP_005767295.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005767296.1 COG0020 Undecaprenyl pyrophosphate synthase YP_005767297.1 COG0277 FAD/FMN-containing dehydrogenases YP_005767298.1 COG0607 Rhodanese-related sulfurtransferase YP_005767299.1 COG1587 Uroporphyrinogen-III synthase YP_005767300.1 COG0239 Integral membrane protein possibly involved in chromosome condensation YP_005767301.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005767302.1 COG2863 Cytochrome c553 YP_005767303.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005767304.1 COG0527 Aspartokinases YP_005767306.1 COG0470 ATPase involved in DNA replication YP_005767307.1 COG0294 Dihydropteroate synthase and related enzymes YP_005767309.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005767311.1 COG2952 Uncharacterized protein conserved in bacteria YP_005767312.1 COG0505 Carbamoylphosphate synthase small subunit YP_005767313.1 COG0388 Predicted amidohydrolase YP_005767316.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_005767317.1 COG0013 Alanyl-tRNA synthetase YP_005767318.1 COG2841 Uncharacterized protein conserved in bacteria YP_005767323.1 COG0238 Ribosomal protein S18 YP_005767324.1 COG0629 Single-stranded DNA-binding protein YP_005767325.1 COG0360 Ribosomal protein S6 YP_005767328.1 COG0557 Exoribonuclease R YP_005767329.1 COG0169 Shikimate 5-dehydrogenase YP_005767331.1 COG4174 ABC-type uncharacterized transport system, permease component YP_005767332.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_005767333.1 COG0180 Tryptophanyl-tRNA synthetase YP_005767334.1 COG0500 SAM-dependent methyltransferases YP_005767335.1 COG1314 Preprotein translocase subunit SecG YP_005767336.1 COG0233 Ribosome recycling factor YP_005767337.1 COG0461 Orotate phosphoribosyltransferase YP_005767338.1 COG1714 Predicted membrane protein/domain YP_005767339.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_005767340.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_005767341.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases YP_005767342.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_005767343.1 COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 YP_005767346.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_005767347.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_005767348.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_005767349.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_005767350.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) YP_005767351.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_005767352.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_005767353.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_005767354.1 COG1729 Uncharacterized protein conserved in bacteria YP_005767355.1 COG1109 Phosphomannomutase YP_005767360.1 COG0159 Tryptophan synthase alpha chain YP_005767361.1 COG0133 Tryptophan synthase beta chain YP_005767362.1 COG0134 Indole-3-glycerol phosphate synthase YP_005767363.1 COG0547 Anthranilate phosphoribosyltransferase YP_005767364.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_005767365.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005767366.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005767367.1 COG2503 Predicted secreted acid phosphatase YP_005767368.1 COG2353 Uncharacterized conserved protein YP_005767369.1 COG0819 Putative transcription activator YP_005767370.1 COG3201 Nicotinamide mononucleotide transporter YP_005767371.1 COG1564 Thiamine pyrophosphokinase YP_005767373.1 COG0203 Ribosomal protein L17 YP_005767374.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_005767375.1 COG0522 Ribosomal protein S4 and related proteins YP_005767376.1 COG0100 Ribosomal protein S11 YP_005767377.1 COG0099 Ribosomal protein S13 YP_005767378.1 COG0257 Ribosomal protein L36 YP_005767379.1 COG0361 Translation initiation factor 1 (IF-1) YP_005767380.1 COG0024 Methionine aminopeptidase YP_005767381.1 COG0201 Preprotein translocase subunit SecY YP_005767382.1 COG0200 Ribosomal protein L15 YP_005767383.1 COG0098 Ribosomal protein S5 YP_005767384.1 COG0256 Ribosomal protein L18 YP_005767385.1 COG0097 Ribosomal protein L6P/L9E YP_005767386.1 COG0096 Ribosomal protein S8 YP_005767387.1 COG0199 Ribosomal protein S14 YP_005767388.1 COG0094 Ribosomal protein L5 YP_005767389.1 COG0198 Ribosomal protein L24 YP_005767390.1 COG0093 Ribosomal protein L14 YP_005767391.1 COG0186 Ribosomal protein S17 YP_005767392.1 COG0255 Ribosomal protein L29 YP_005767393.1 COG0197 Ribosomal protein L16/L10E YP_005767394.1 COG0092 Ribosomal protein S3 YP_005767395.1 COG0091 Ribosomal protein L22 YP_005767396.1 COG0185 Ribosomal protein S19 YP_005767397.1 COG0090 Ribosomal protein L2 YP_005767398.1 COG0089 Ribosomal protein L23 YP_005767399.1 COG0088 Ribosomal protein L4 YP_005767400.1 COG0087 Ribosomal protein L3 YP_005767401.1 COG0051 Ribosomal protein S10 YP_005767402.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005767404.1 COG0164 Ribonuclease HII YP_005767406.1 COG0114 Fumarase YP_005767409.1 COG0845 Membrane-fusion protein YP_005767410.1 COG3696 Putative silver efflux pump YP_005767411.1 COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance) YP_005767412.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) YP_005767413.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005767415.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005767416.1 COG2214 DnaJ-class molecular chaperone YP_005767417.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_005767418.1 COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain YP_005767419.1 COG0811 Biopolymer transport proteins YP_005767420.1 COG0848 Biopolymer transport protein YP_005767421.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_005767422.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005767423.1 COG0598 Mg2+ and Co2+ transporters YP_005767424.1 COG0126 3-phosphoglycerate kinase YP_005767425.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005767426.1 COG0692 Uracil DNA glycosylase YP_005767427.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005767429.1 COG0793 Periplasmic protease YP_005767432.1 COG0863 DNA modification methylase YP_005767433.1 COG4889 Predicted helicase YP_005767434.1 COG0157 Nicotinate-nucleotide pyrophosphorylase YP_005767435.1 COG0379 Quinolinate synthase YP_005767436.1 COG0688 Phosphatidylserine decarboxylase YP_005767439.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_005767440.1 COG0658 Predicted membrane metal-binding protein YP_005767441.1 COG0305 Replicative DNA helicase YP_005767442.1 COG0062 Uncharacterized conserved protein YP_005767443.1 COG0642 Signal transduction histidine kinase YP_005767444.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005767446.1 COG0863 DNA modification methylase YP_005767447.1 COG0863 DNA modification methylase YP_005767448.1 COG0863 DNA modification methylase YP_005767449.1 COG2189 Adenine specific DNA methylase Mod YP_005767450.1 COG2189 Adenine specific DNA methylase Mod YP_005767451.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005767452.1 COG1792 Cell shape-determining protein YP_005767453.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_005767454.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_005767455.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_005767456.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005767457.1 COG1699 Uncharacterized protein conserved in bacteria YP_005767459.1 COG4105 DNA uptake lipoprotein YP_005767460.1 COG0466 ATP-dependent Lon protease, bacterial type YP_005767461.1 COG0287 Prephenate dehydrogenase YP_005767462.1 COG1864 DNA/RNA endonuclease G, NUC1 YP_005767463.1 COG2189 Adenine specific DNA methylase Mod YP_005767464.1 COG3421 Uncharacterized protein conserved in bacteria YP_005767465.1 COG0502 Biotin synthase and related enzymes YP_005767466.1 COG1295 Predicted membrane protein YP_005767467.1 COG3676 Transposase and inactivated derivatives YP_005767472.1 COG0780 Enzyme related to GTP cyclohydrolase I YP_005767473.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_005767474.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005767475.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005767476.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_005767477.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_005767478.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_005767479.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005767480.1 COG0060 Isoleucyl-tRNA synthetase YP_005767481.1 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) YP_005767484.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_005767485.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_005767486.1 COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain YP_005767487.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_005767490.1 COG0732 Restriction endonuclease S subunits YP_005767491.1 COG0788 Formyltetrahydrofolate hydrolase YP_005767492.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005767500.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_005767501.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_005767502.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase YP_005767503.1 COG0691 tmRNA-binding protein YP_005767504.1 COG0811 Biopolymer transport proteins YP_005767505.1 COG0848 Biopolymer transport protein YP_005767506.1 COG0230 Ribosomal protein L34 YP_005767507.1 COG0594 RNase P protein component YP_005767508.1 COG0759 Uncharacterized conserved protein YP_005767509.1 COG0706 Preprotein translocase subunit YidC YP_005767510.1 COG1315 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain YP_005767511.1 COG0486 Predicted GTPase YP_005767515.1 COG0481 Membrane GTPase LepA YP_005767518.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005767519.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005767520.1 COG0587 DNA polymerase III, alpha subunit YP_005767521.1 COG1858 Cytochrome c peroxidase YP_005767522.1 COG3187 Heat shock protein YP_005767524.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_005767525.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_005767526.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_005767528.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005767530.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005767532.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005767534.1 COG0125 Thymidylate kinase YP_005767535.1 COG0669 Phosphopantetheine adenylyltransferase YP_005767536.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_005767537.1 COG1261 Flagellar basal body P-ring biosynthesis protein YP_005767538.1 COG0210 Superfamily I DNA and RNA helicases YP_005767539.1 COG0457 FOG: TPR repeat YP_005767540.1 COG0172 Seryl-tRNA synthetase YP_005767541.1 COG0388 Predicted amidohydrolase YP_005767542.1 COG1722 Exonuclease VII small subunit YP_005767543.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_005767544.1 COG1981 Predicted membrane protein YP_005767545.1 COG1739 Uncharacterized conserved protein YP_005767546.1 COG0842 ABC-type multidrug transport system, permease component YP_005767547.1 COG0842 ABC-type multidrug transport system, permease component YP_005767548.1 COG0845 Membrane-fusion protein YP_005767549.1 COG1538 Outer membrane protein YP_005767550.1 COG1253 Hemolysins and related proteins containing CBS domains YP_005767551.1 COG0306 Phosphate/sulphate permeases YP_005767552.1 COG0694 Thioredoxin-like proteins and domains YP_005767554.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_005767555.1 COG0176 Transaldolase YP_005767556.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_005767557.1 COG0193 Peptidyl-tRNA hydrolase YP_005767558.1 COG0795 Predicted permeases YP_005767559.1 COG3886 Predicted HKD family nuclease YP_005767562.1 COG3399 Uncharacterized protein conserved in bacteria YP_005767563.1 COG2217 Cation transport ATPase YP_005767564.1 COG4123 Predicted O-methyltransferase YP_005767565.1 COG0117 Pyrimidine deaminase YP_005767566.1 COG0786 Na+/glutamate symporter YP_005767567.1 COG1748 Saccharopine dehydrogenase and related proteins YP_005767568.1 COG0348 Polyferredoxin YP_005767569.1 COG0344 Predicted membrane protein YP_005767570.1 COG1539 Dihydroneopterin aldolase YP_005767572.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005767573.1 COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] YP_005767574.1 COG0195 Transcription elongation factor YP_005767575.1 COG1002 Type II restriction enzyme, methylase subunits YP_005767576.1 COG3587 Restriction endonuclease YP_005767577.1 COG2189 Adenine specific DNA methylase Mod YP_005767578.1 COG2189 Adenine specific DNA methylase Mod YP_005767579.1 COG1200 RecG-like helicase YP_005767582.1 COG0708 Exonuclease III YP_005767584.1 COG0593 ATPase involved in DNA replication initiation YP_005767585.1 COG0813 Purine-nucleoside phosphorylase YP_005767587.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_005767588.1 COG1351 Predicted alternative thymidylate synthase YP_005767590.1 COG0732 Restriction endonuclease S subunits YP_005767592.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005767593.1 COG1451 Predicted metal-dependent hydrolase YP_005767594.1 COG4772 Outer membrane receptor for Fe3+-dicitrate YP_005767596.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_005767597.1 COG0686 Alanine dehydrogenase YP_005767599.1 COG0061 Predicted sugar kinase YP_005767600.1 COG0497 ATPase involved in DNA repair YP_005767601.1 COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP YP_005767603.1 COG2452 Predicted site-specific integrase-resolvase YP_005767604.1 COG0675 Transposase and inactivated derivatives YP_005767607.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005767608.1 COG0036 Pentose-5-phosphate-3-epimerase YP_005767609.1 COG0158 Fructose-1,6-bisphosphatase YP_005767611.1 COG0827 Adenine-specific DNA methylase YP_005767614.1 COG0270 Site-specific DNA methylase YP_005767615.1 COG0264 Translation elongation factor Ts YP_005767616.1 COG0052 Ribosomal protein S2 YP_005767618.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_005767619.1 COG3004 Na+/H+ antiporter YP_005767620.1 COG1862 Preprotein translocase subunit YajC YP_005767621.1 COG0342 Preprotein translocase subunit SecD YP_005767622.1 COG0341 Preprotein translocase subunit SecF YP_005767624.1 COG0495 Leucyl-tRNA synthetase YP_005767626.1 COG0285 Folylpolyglutamate synthase YP_005767627.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005767628.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005767629.1 COG1664 Integral membrane protein CcmA involved in cell shape determination YP_005767630.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_005767631.1 COG0723 Rieske Fe-S protein YP_005767632.1 COG1290 Cytochrome b subunit of the bc complex YP_005767633.1 COG2857 Cytochrome c1 YP_005767635.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005767636.1 COG1677 Flagellar hook-basal body protein YP_005767637.1 COG1558 Flagellar basal body rod protein YP_005767638.1 COG1815 Flagellar basal body protein YP_005767639.1 COG0772 Bacterial cell division membrane protein YP_005767640.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005767641.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005767642.1 COG0450 Peroxiredoxin YP_005767643.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_005767644.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005767646.1 COG0218 Predicted GTPase YP_005767647.1 COG1934 Uncharacterized protein conserved in bacteria YP_005767649.1 COG1778 Low specificity phosphatase (HAD superfamily) YP_005767650.1 COG0797 Lipoproteins YP_005767651.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005767652.1 COG0084 Mg-dependent DNase YP_005767653.1 COG0307 Riboflavin synthase alpha chain YP_005767654.1 COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB YP_005767655.1 COG1135 ABC-type metal ion transport system, ATPase component YP_005767656.1 COG2011 ABC-type metal ion transport system, permease component YP_005767658.1 COG0671 Membrane-associated phospholipid phosphatase YP_005767659.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005767660.1 COG0854 Pyridoxal phosphate biosynthesis protein YP_005767661.1 COG1995 Pyridoxal phosphate biosynthesis protein YP_005767662.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_005767664.1 COG4786 Flagellar basal body rod protein YP_005767665.1 COG4735 Uncharacterized protein conserved in bacteria