-- dump date 20140619_113116 -- class Genbank::CDS -- table cds_note -- id note YP_005424167.1 COG0781 Transcription termination factor YP_005424168.1 COG0054 Riboflavin synthase beta-chain YP_005424169.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_005424170.1 COG0284 Orotidine-5'-phosphate decarboxylase YP_005424171.1 COG0414 Panthothenate synthetase YP_005424173.1 COG0459 Chaperonin GroEL (HSP60 family) YP_005424174.1 COG0234 Co-chaperonin GroES (HSP10) YP_005424175.1 COG0358 DNA primase (bacterial type) YP_005424176.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005424180.1 COG3451 Type IV secretory pathway, VirB4 components YP_005424181.1 COG3014 Uncharacterized protein conserved in bacteria YP_005424182.1 COG0835 Chemotaxis signal transduction protein YP_005424183.1 COG0019 Diaminopimelate decarboxylase YP_005424184.1 COG0671 Membrane-associated phospholipid phosphatase YP_005424185.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_005424188.1 COG0372 Citrate synthase YP_005424189.1 COG0538 Isocitrate dehydrogenases YP_005424191.1 COG0132 Dethiobiotin synthetase YP_005424193.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_005424194.1 COG2127 Uncharacterized conserved protein YP_005424195.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005424196.1 COG0853 Aspartate 1-decarboxylase YP_005424197.1 COG0718 Uncharacterized protein conserved in bacteria YP_005424198.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005424201.1 COG3736 Type IV secretory pathway, component VirB8 YP_005424202.1 COG3504 Type IV secretory pathway, VirB9 components YP_005424203.1 COG2948 Type IV secretory pathway, VirB10 components YP_005424204.1 COG0836 Mannose-1-phosphate guanylyltransferase YP_005424205.1 COG1089 GDP-D-mannose dehydratase YP_005424206.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005424210.1 COG0309 Hydrogenase maturation factor YP_005424211.1 COG0068 Hydrogenase maturation factor YP_005424212.1 COG2957 Peptidylarginine deiminase and related enzymes YP_005424213.1 COG0863 DNA modification methylase YP_005424214.1 COG0270 Site-specific DNA methylase YP_005424215.1 COG0270 Site-specific DNA methylase YP_005424216.1 COG0591 Na+/proline symporter YP_005424217.1 COG0506 Proline dehydrogenase YP_005424228.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005424229.1 COG0829 Urease accessory protein UreH YP_005424230.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_005424231.1 COG0830 Urease accessory protein UreF YP_005424232.1 COG2371 Urease accessory protein UreE YP_005424233.1 COG1138 Cytochrome c biogenesis factor YP_005424234.1 COG0804 Urea amidohydrolase (urease) alpha subunit YP_005424235.1 COG0831 Urea amidohydrolase (urease) gamma subunit YP_005424236.1 COG0597 Lipoprotein signal peptidase YP_005424237.1 COG1109 Phosphomannomutase YP_005424238.1 COG0268 Ribosomal protein S20 YP_005424239.1 COG0216 Protein chain release factor A YP_005424245.1 COG0840 Methyl-accepting chemotaxis protein YP_005424246.1 COG0103 Ribosomal protein S9 YP_005424247.1 COG0102 Ribosomal protein L13 YP_005424249.1 COG0579 Predicted dehydrogenase YP_005424250.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_005424251.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005424252.1 COG0775 Nucleoside phosphorylase YP_005424253.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005424255.1 COG0863 DNA modification methylase YP_005424257.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_005424259.1 COG0498 Threonine synthase YP_005424260.1 COG0840 Methyl-accepting chemotaxis protein YP_005424261.1 COG1636 Uncharacterized protein conserved in bacteria YP_005424262.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005424263.1 COG0840 Methyl-accepting chemotaxis protein YP_005424265.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_005424266.1 COG1854 LuxS protein involved in autoinducer AI2 synthesis YP_005424267.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_005424268.1 COG0031 Cysteine synthase YP_005424269.1 COG0443 Molecular chaperone YP_005424270.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_005424271.1 COG1420 Transcriptional regulator of heat shock gene YP_005424272.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_005424274.1 COG2604 Uncharacterized protein conserved in bacteria YP_005424275.1 COG1344 Flagellin and related hook-associated proteins YP_005424276.1 COG0550 Topoisomerase IA YP_005424277.1 COG0731 Fe-S oxidoreductases YP_005424280.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_005424282.1 COG0441 Threonyl-tRNA synthetase YP_005424283.1 COG0290 Translation initiation factor 3 (IF-3) YP_005424284.1 COG0291 Ribosomal protein L35 YP_005424285.1 COG0292 Ribosomal protein L20 YP_005424289.1 COG1760 L-serine deaminase YP_005424290.1 COG0814 Amino acid permeases YP_005424291.1 COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_005424293.1 COG1225 Peroxiredoxin YP_005424294.1 COG1556 Uncharacterized conserved protein YP_005424295.1 COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain YP_005424296.1 COG0247 Fe-S oxidoreductase YP_005424297.1 COG1620 L-lactate permease YP_005424298.1 COG1620 L-lactate permease YP_005424299.1 COG1194 A/G-specific DNA glycosylase YP_005424300.1 COG0471 Di- and tricarboxylate transporters YP_005424301.1 COG3278 Cbb3-type cytochrome oxidase, subunit 1 YP_005424302.1 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit YP_005424304.1 COG2010 Cytochrome c, mono- and diheme variants YP_005424307.1 COG0443 Molecular chaperone YP_005424310.1 COG2107 Predicted periplasmic solute-binding protein YP_005424311.1 COG0468 RecA/RadA recombinase YP_005424312.1 COG0148 Enolase YP_005424315.1 COG0703 Shikimate kinase YP_005424317.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005424318.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005424319.1 COG0217 Uncharacterized conserved protein YP_005424320.1 COG0113 Delta-aminolevulinic acid dehydratase YP_005424321.1 COG0642 Signal transduction histidine kinase YP_005424322.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005424324.1 COG0457 FOG: TPR repeat YP_005424325.1 COG0826 Collagenase and related proteases YP_005424327.1 COG1186 Protein chain release factor B YP_005424328.1 COG0303 Molybdopterin biosynthesis enzyme YP_005424329.1 COG1684 Flagellar biosynthesis pathway, component FliR YP_005424332.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005424333.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_005424334.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005424335.1 COG0270 Site-specific DNA methylase YP_005424336.1 COG1943 Transposase and inactivated derivatives YP_005424337.1 COG0675 Transposase and inactivated derivatives YP_005424338.1 COG0675 Transposase and inactivated derivatives YP_005424339.1 COG4487 Uncharacterized protein conserved in bacteria YP_005424340.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005424341.1 COG0675 Transposase and inactivated derivatives YP_005424342.1 COG1943 Transposase and inactivated derivatives YP_005424343.1 COG0840 Methyl-accepting chemotaxis protein YP_005424344.1 COG0223 Methionyl-tRNA formyltransferase YP_005424345.1 COG0340 Biotin-(acetyl-CoA carboxylase) ligase YP_005424346.1 COG1192 ATPases involved in chromosome partitioning YP_005424347.1 COG1475 Predicted transcriptional regulators YP_005424348.1 COG0711 F0F1-type ATP synthase, subunit b YP_005424349.1 COG0711 F0F1-type ATP synthase, subunit b YP_005424351.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_005424352.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_005424353.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005424354.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_005424355.1 COG0811 Biopolymer transport proteins YP_005424356.1 COG0848 Biopolymer transport protein YP_005424358.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_005424359.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_005424361.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_005424364.1 COG0270 Site-specific DNA methylase YP_005424366.1 COG1256 Flagellar hook-associated protein YP_005424367.1 COG0405 Gamma-glutamyltransferase YP_005424368.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005424373.1 COG0556 Helicase subunit of the DNA excision repair complex YP_005424375.1 COG0015 Adenylosuccinate lyase YP_005424376.1 COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit YP_005424377.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit YP_005424378.1 COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit YP_005424379.1 COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit YP_005424383.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005424384.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005424385.1 COG1064 Zn-dependent alcohol dehydrogenases YP_005424386.1 COG0837 Glucokinase YP_005424387.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_005424388.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_005424389.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_005424390.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_005424391.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005424392.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_005424394.1 COG1087 UDP-glucose 4-epimerase YP_005424395.1 COG0101 Pseudouridylate synthase YP_005424396.1 COG0795 Predicted permeases YP_005424397.1 COG2518 Protein-L-isoaspartate carboxylmethyltransferase YP_005424398.1 COG0208 Ribonucleotide reductase, beta subunit YP_005424399.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_005424401.1 COG0439 Biotin carboxylase YP_005424402.1 COG0511 Biotin carboxyl carrier protein YP_005424403.1 COG0717 Deoxycytidine deaminase YP_005424405.1 COG1385 Uncharacterized protein conserved in bacteria YP_005424407.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_005424408.1 COG2143 Thioredoxin-related protein YP_005424409.1 COG1333 ResB protein required for cytochrome c biosynthesis YP_005424412.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_005424413.1 COG2890 Methylase of polypeptide chain release factors YP_005424414.1 COG0501 Zn-dependent protease with chaperone function YP_005424417.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005424419.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_005424420.1 COG0500 SAM-dependent methyltransferases YP_005424421.1 COG0605 Superoxide dismutase YP_005424422.1 COG2077 Peroxiredoxin YP_005424423.1 COG0835 Chemotaxis signal transduction protein YP_005424424.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_005424425.1 COG0835 Chemotaxis signal transduction protein YP_005424426.1 COG2908 Uncharacterized protein conserved in bacteria YP_005424427.1 COG0325 Predicted enzyme with a TIM-barrel fold YP_005424428.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_005424429.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_005424431.1 COG0539 Ribosomal protein S1 YP_005424432.1 COG0761 Penicillin tolerance protein YP_005424433.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_005424434.1 COG0073 EMAP domain YP_005424435.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_005424437.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005424438.1 COG0520 Selenocysteine lyase YP_005424441.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_005424443.1 COG0668 Small-conductance mechanosensitive channel YP_005424444.1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases YP_005424445.1 COG0143 Methionyl-tRNA synthetase YP_005424447.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_005424448.1 COG0438 Glycosyltransferase YP_005424449.1 COG1166 Arginine decarboxylase (spermidine biosynthesis) YP_005424455.1 COG1479 Uncharacterized conserved protein YP_005424460.1 COG0668 Small-conductance mechanosensitive channel YP_005424462.1 COG0206 Cell division GTPase YP_005424463.1 COG0849 Actin-like ATPase involved in cell division YP_005424464.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005424465.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005424466.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_005424467.1 COG0696 Phosphoglyceromutase YP_005424469.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_005424471.1 COG0845 Membrane-fusion protein YP_005424472.1 COG3696 Putative silver efflux pump YP_005424475.1 COG0699 Predicted GTPases (dynamin-related) YP_005424476.1 COG0699 Predicted GTPases (dynamin-related) YP_005424478.1 COG3276 Selenocysteine-specific translation elongation factor YP_005424480.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_005424481.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_005424482.1 COG0327 Uncharacterized conserved protein YP_005424483.1 COG1579 Zn-ribbon protein, possibly nucleic acid-binding YP_005424484.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_005424485.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005424486.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_005424487.1 COG0778 Nitroreductase YP_005424489.1 COG1546 Uncharacterized protein (competence- and mitomycin-induced) YP_005424491.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_005424492.1 COG1576 Uncharacterized conserved protein YP_005424497.1 COG1757 Na+/H+ antiporter YP_005424498.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_005424499.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_005424500.1 COG1115 Na+/alanine symporter YP_005424501.1 COG0787 Alanine racemase YP_005424502.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005424503.1 COG0765 ABC-type amino acid transport system, permease component YP_005424505.1 COG1479 Uncharacterized conserved protein YP_005424506.1 COG0477 Permeases of the major facilitator superfamily YP_005424508.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005424509.1 COG0602 Organic radical activating enzymes YP_005424510.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_005424512.1 COG0496 Predicted acid phosphatase YP_005424513.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005424514.1 COG0302 GTP cyclohydrolase I YP_005424515.1 COG0501 Zn-dependent protease with chaperone function YP_005424516.1 COG0585 Uncharacterized conserved protein YP_005424517.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_005424518.1 COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog YP_005424521.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005424522.1 COG0670 Integral membrane protein, interacts with FtsH YP_005424523.1 COG0009 Putative translation factor (SUA5) YP_005424524.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005424526.1 COG1190 Lysyl-tRNA synthetase (class II) YP_005424530.1 COG0210 Superfamily I DNA and RNA helicases YP_005424531.1 COG0827 Adenine-specific DNA methylase YP_005424533.1 COG1749 Flagellar hook protein FlgE YP_005424534.1 COG1843 Flagellar hook capping protein YP_005424536.1 COG0282 Acetate kinase YP_005424537.1 COG0282 Acetate kinase YP_005424538.1 COG0282 Acetate kinase YP_005424539.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_005424541.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_005424542.1 COG0298 Hydrogenase maturation factor YP_005424543.1 COG0409 Hydrogenase maturation factor YP_005424544.1 COG0409 Hydrogenase maturation factor YP_005424549.1 COG3041 Uncharacterized protein conserved in bacteria YP_005424552.1 COG1607 Acyl-CoA hydrolase YP_005424553.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005424554.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005424555.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_005424556.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005424559.1 COG0215 Cysteinyl-tRNA synthetase YP_005424560.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_005424562.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_005424564.1 COG1432 Uncharacterized conserved protein YP_005424565.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_005424566.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005424567.1 COG0753 Catalase YP_005424570.1 COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism YP_005424571.1 COG2134 CDP-diacylglycerol pyrophosphatase YP_005424572.1 COG1749 Flagellar hook protein FlgE YP_005424573.1 COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) YP_005424575.1 COG0763 Lipid A disaccharide synthetase YP_005424576.1 COG0782 Transcription elongation factor YP_005424577.1 COG0756 dUTPase YP_005424580.1 COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor YP_005424581.1 COG2836 Uncharacterized conserved protein YP_005424582.1 COG0241 Histidinol phosphatase and related phosphatases YP_005424583.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005424584.1 COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase YP_005424585.1 COG0279 Phosphoheptose isomerase YP_005424586.1 COG0516 IMP dehydrogenase/GMP reductase YP_005424587.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005424588.1 COG2958 Uncharacterized protein conserved in bacteria YP_005424589.1 COG0671 Membrane-associated phospholipid phosphatase YP_005424590.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005424592.1 COG0732 Restriction endonuclease S subunits YP_005424593.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005424594.1 COG2145 Hydroxyethylthiazole kinase, sugar kinase family YP_005424595.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_005424596.1 COG0352 Thiamine monophosphate synthase YP_005424598.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_005424599.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_005424600.1 COG2067 Long-chain fatty acid transport protein YP_005424602.1 COG3018 Uncharacterized protein conserved in bacteria YP_005424604.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005424605.1 COG1160 Predicted GTPases YP_005424607.1 COG0421 Spermidine synthase YP_005424608.1 COG0237 Dephospho-CoA kinase YP_005424609.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005424610.1 COG0516 IMP dehydrogenase/GMP reductase YP_005424611.1 COG0356 F0F1-type ATP synthase, subunit a YP_005424612.1 COG0724 RNA-binding proteins (RRM domain) YP_005424613.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_005424614.1 COG0492 Thioredoxin reductase YP_005424615.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005424616.1 COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase YP_005424617.1 COG0460 Homoserine dehydrogenase YP_005424618.1 COG0322 Nuclease subunit of the excinuclease complex YP_005424620.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components YP_005424621.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_005424623.1 COG1360 Flagellar motor protein YP_005424624.1 COG1291 Flagellar motor component YP_005424625.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_005424626.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005424627.1 COG1565 Uncharacterized conserved protein YP_005424629.1 COG0742 N6-adenine-specific methylase YP_005424630.1 COG1580 Flagellar basal body-associated protein YP_005424631.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_005424632.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005424633.1 COG1451 Predicted metal-dependent hydrolase YP_005424634.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_005424636.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_005424638.1 COG0807 GTP cyclohydrolase II YP_005424639.1 COG1977 Molybdopterin converting factor, small subunit YP_005424640.1 COG0314 Molybdopterin converting factor, large subunit YP_005424641.1 COG0521 Molybdopterin biosynthesis enzymes YP_005424642.1 COG0315 Molybdenum cofactor biosynthesis enzyme YP_005424645.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_005424646.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005424647.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005424648.1 COG0606 Predicted ATPase with chaperone activity YP_005424649.1 COG2217 Cation transport ATPase YP_005424650.1 COG0732 Restriction endonuclease S subunits YP_005424652.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_005424653.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_005424654.1 COG2834 Outer membrane lipoprotein-sorting protein YP_005424659.1 COG1049 Aconitase B YP_005424660.1 COG1427 Predicted periplasmic solute-binding protein YP_005424661.1 COG0528 Uridylate kinase YP_005424662.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_005424663.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005424664.1 COG0162 Tyrosyl-tRNA synthetase YP_005424665.1 COG2070 Dioxygenases related to 2-nitropropane dioxygenase YP_005424666.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_005424668.1 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A YP_005424669.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_005424671.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_005424673.1 COG0552 Signal recognition particle GTPase YP_005424675.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_005424676.1 COG1418 Predicted HD superfamily hydrolase YP_005424677.1 COG0534 Na+-driven multidrug efflux pump YP_005424678.1 COG2056 Predicted permease YP_005424679.1 COG0388 Predicted amidohydrolase YP_005424681.1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 YP_005424683.1 COG1516 Flagellin-specific chaperone FliS YP_005424684.1 COG1345 Flagellar capping protein YP_005424685.1 COG1334 Uncharacterized flagellar protein FlaG YP_005424686.1 COG4942 Membrane-bound metallopeptidase YP_005424687.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005424688.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_005424689.1 COG3401 Fibronectin type 3 domain-containing protein YP_005424690.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005424691.1 COG0772 Bacterial cell division membrane protein YP_005424692.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_005424693.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005424694.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_005424695.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005424696.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_005424697.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_005424698.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_005424699.1 COG2236 Predicted phosphoribosyltransferases YP_005424700.1 COG0621 2-methylthioadenine synthetase YP_005424702.1 COG0270 Site-specific DNA methylase YP_005424703.1 COG0270 Site-specific DNA methylase YP_005424707.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005424708.1 COG0042 tRNA-dihydrouridine synthase YP_005424711.1 COG2704 Anaerobic C4-dicarboxylate transporter YP_005424712.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_005424717.1 COG1279 Lysine efflux permease YP_005424718.1 COG2812 DNA polymerase III, gamma/tau subunits YP_005424719.1 COG0802 Predicted ATPase or kinase YP_005424720.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_005424721.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_005424722.1 COG3177 Uncharacterized conserved protein YP_005424723.1 COG1896 Predicted hydrolases of HD superfamily YP_005424725.1 COG1912 Uncharacterized conserved protein YP_005424728.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_005424730.1 COG0178 Excinuclease ATPase subunit YP_005424731.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_005424733.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005424734.1 COG0818 Diacylglycerol kinase YP_005424736.1 COG0183 Acetyl-CoA acetyltransferase YP_005424737.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_005424738.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_005424739.1 COG2031 Short chain fatty acids transporter YP_005424740.1 COG3528 Uncharacterized protein conserved in bacteria YP_005424741.1 COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit YP_005424742.1 COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit YP_005424743.1 COG4647 Acetone carboxylase, gamma subunit YP_005424745.1 COG0863 DNA modification methylase YP_005424746.1 COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB YP_005424747.1 COG0370 Fe2+ transport system protein B YP_005424748.1 COG4772 Outer membrane receptor for Fe3+-dicitrate YP_005424749.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_005424752.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005424753.1 COG0673 Predicted dehydrogenases and related proteins YP_005424754.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005424755.1 COG0582 Integrase YP_005424757.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005424759.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_005424760.1 COG4889 Predicted helicase YP_005424761.1 COG4889 Predicted helicase YP_005424762.1 COG0247 Fe-S oxidoreductase YP_005424763.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005424765.1 COG0082 Chorismate synthase YP_005424766.1 COG0571 dsRNA-specific ribonuclease YP_005424767.1 COG0328 Ribonuclease HI YP_005424768.1 COG2956 Predicted N-acetylglucosaminyl transferase YP_005424769.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005424770.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_005424772.1 COG0612 Predicted Zn-dependent peptidases YP_005424773.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_005424774.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_005424775.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_005424776.1 COG1528 Ferritin-like protein YP_005424777.1 COG0560 Phosphoserine phosphatase YP_005424779.1 COG1573 Uracil-DNA glycosylase YP_005424780.1 COG1027 Aspartate ammonia-lyase YP_005424781.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_005424783.1 COG1210 UDP-glucose pyrophosphorylase YP_005424784.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005424785.1 COG0762 Predicted integral membrane protein YP_005424786.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005424787.1 COG0778 Nitroreductase YP_005424789.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_005424791.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005424792.1 COG0603 Predicted PP-loop superfamily ATPase YP_005424797.1 COG0680 Ni,Fe-hydrogenase maturation factor YP_005424798.1 COG1969 Ni,Fe-hydrogenase I cytochrome b subunit YP_005424799.1 COG0374 Ni,Fe-hydrogenase I large subunit YP_005424800.1 COG1740 Ni,Fe-hydrogenase I small subunit YP_005424802.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_005424803.1 COG1479 Uncharacterized conserved protein YP_005424805.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005424806.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_005424807.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis YP_005424808.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005424809.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_005424811.1 COG1193 Mismatch repair ATPase (MutS family) YP_005424813.1 COG0221 Inorganic pyrophosphatase YP_005424815.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_005424816.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_005424817.1 COG0563 Adenylate kinase and related kinases YP_005424818.1 COG0173 Aspartyl-tRNA synthetase YP_005424819.1 COG0835 Chemotaxis signal transduction protein YP_005424820.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_005424823.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005424824.1 COG0842 ABC-type multidrug transport system, permease component YP_005424826.1 COG0015 Adenylosuccinate lyase YP_005424827.1 COG0841 Cation/multidrug efflux pump YP_005424828.1 COG0845 Membrane-fusion protein YP_005424829.1 COG1538 Outer membrane protein YP_005424830.1 COG0407 Uroporphyrinogen-III decarboxylase YP_005424832.1 COG2231 Uncharacterized protein related to Endonuclease III YP_005424833.1 COG1344 Flagellin and related hook-associated proteins YP_005424834.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005424835.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005424836.1 COG0840 Methyl-accepting chemotaxis protein YP_005424837.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_005424838.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_005424841.1 COG1495 Disulfide bond formation protein DsbB YP_005424843.1 COG5610 Predicted hydrolase (HAD superfamily) YP_005424844.1 COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit YP_005424845.1 COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit YP_005424846.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit YP_005424847.1 COG1146 Ferredoxin YP_005424848.1 COG1559 Predicted periplasmic solute-binding protein YP_005424850.1 COG1918 Fe2+ transport system protein A YP_005424851.1 COG0177 Predicted EndoIII-related endonuclease YP_005424852.1 COG1886 Flagellar motor switch/type III secretory pathway protein YP_005424853.1 COG0358 DNA primase (bacterial type) YP_005424854.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_005424855.1 COG0418 Dihydroorotase YP_005424856.1 COG4692 Predicted neuraminidase (sialidase) YP_005424858.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_005424859.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_005424860.1 COG0681 Signal peptidase I YP_005424861.1 COG1994 Zn-dependent proteases YP_005424862.1 COG0698 Ribose 5-phosphate isomerase RpiB YP_005424864.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_005424865.1 COG0586 Uncharacterized membrane-associated protein YP_005424866.1 COG0260 Leucyl aminopeptidase YP_005424867.1 COG0012 Predicted GTPase, probable translation factor YP_005424869.1 COG0628 Predicted permease YP_005424870.1 COG0253 Diaminopimelate epimerase YP_005424871.1 COG3059 Predicted membrane protein YP_005424875.1 COG0828 Ribosomal protein S21 YP_005424876.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005424877.1 COG0236 Acyl carrier protein YP_005424878.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005424879.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_005424882.1 COG1217 Predicted membrane GTPase involved in stress response YP_005424883.1 COG0566 rRNA methylases YP_005424884.1 COG0313 Predicted methyltransferases YP_005424885.1 COG0254 Ribosomal protein L31 YP_005424886.1 COG1158 Transcription termination factor YP_005424887.1 COG0796 Glutamate racemase YP_005424888.1 COG1112 Superfamily I DNA and RNA helicases and helicase subunits YP_005424890.1 COG0419 ATPase involved in DNA repair YP_005424892.1 COG1112 Superfamily I DNA and RNA helicases and helicase subunits YP_005424898.1 COG3034 Uncharacterized protein conserved in bacteria YP_005424899.1 COG1159 GTPase YP_005424900.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_005424901.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_005424902.1 COG0359 Ribosomal protein L9 YP_005424903.1 COG1479 Uncharacterized conserved protein YP_005424904.1 COG0174 Glutamine synthetase YP_005424905.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005424908.1 COG0551 Zn-finger domain associated with topoisomerase type I YP_005424912.1 COG3505 Type IV secretory pathway, VirD4 components YP_005424913.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005424915.1 COG2948 Type IV secretory pathway, VirB10 components YP_005424916.1 COG3504 Type IV secretory pathway, VirB9 components YP_005424918.1 COG3736 Type IV secretory pathway, component VirB8 YP_005424927.1 COG0249 Mismatch repair ATPase (MutS family) YP_005424930.1 COG3451 Type IV secretory pathway, VirB4 components YP_005424934.1 COG0289 Dihydrodipicolinate reductase YP_005424935.1 COG0277 FAD/FMN-containing dehydrogenases YP_005424937.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005424938.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005424948.1 COG3504 Type IV secretory pathway, VirB9 components YP_005424949.1 COG2948 Type IV secretory pathway, VirB10 components YP_005424952.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005424954.1 COG3505 Type IV secretory pathway, VirD4 components YP_005424955.1 COG0827 Adenine-specific DNA methylase YP_005424959.1 COG0550 Topoisomerase IA YP_005424964.1 COG1192 ATPases involved in chromosome partitioning YP_005424974.1 COG0582 Integrase YP_005424980.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005424983.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005424984.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_005424985.1 COG2829 Outer membrane phospholipase A YP_005424986.1 COG0733 Na+-dependent transporters of the SNF family YP_005424987.1 COG0733 Na+-dependent transporters of the SNF family YP_005424988.1 COG0824 Predicted thioesterase YP_005424990.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_005424991.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005424993.1 COG0227 Ribosomal protein L28 YP_005424994.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_005425000.1 COG0753 Catalase YP_005425001.1 COG0270 Site-specific DNA methylase YP_005425003.1 COG0338 Site-specific DNA methylase YP_005425004.1 COG1217 Predicted membrane GTPase involved in stress response YP_005425005.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005425006.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005425008.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005425009.1 COG1118 ABC-type sulfate/molybdate transport systems, ATPase component YP_005425010.1 COG4149 ABC-type molybdate transport system, permease component YP_005425011.1 COG0725 ABC-type molybdate transport system, periplasmic component YP_005425013.1 COG0475 Kef-type K+ transport systems, membrane components YP_005425014.1 COG1164 Oligoendopeptidase F YP_005425016.1 COG2048 Heterodisulfide reductase, subunit B YP_005425019.1 COG2604 Uncharacterized protein conserved in bacteria YP_005425020.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005425021.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005425022.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005425023.1 COG0732 Restriction endonuclease S subunits YP_005425024.1 COG0855 Polyphosphate kinase YP_005425025.1 COG0167 Dihydroorotate dehydrogenase YP_005425026.1 COG0612 Predicted Zn-dependent peptidases YP_005425027.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005425028.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005425030.1 COG0558 Phosphatidylglycerophosphate synthase YP_005425031.1 COG0833 Amino acid transporters YP_005425032.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005425033.1 COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase YP_005425034.1 COG0784 FOG: CheY-like receiver YP_005425035.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005425037.1 COG2214 DnaJ-class molecular chaperone YP_005425038.1 COG0789 Predicted transcriptional regulators YP_005425039.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase YP_005425040.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_005425041.1 COG4731 Uncharacterized protein conserved in bacteria YP_005425042.1 COG2731 Beta-galactosidase, beta subunit YP_005425043.1 COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation YP_005425044.1 COG1868 Flagellar motor switch protein YP_005425045.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005425047.1 COG0455 ATPases involved in chromosome partitioning YP_005425048.1 COG1419 Flagellar GTP-binding protein YP_005425049.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_005425050.1 COG0006 Xaa-Pro aminopeptidase YP_005425051.1 COG0757 3-dehydroquinate dehydratase II YP_005425052.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_005425053.1 COG0184 Ribosomal protein S15P/S13E YP_005425054.1 COG1298 Flagellar biosynthesis pathway, component FlhA YP_005425055.1 COG2404 Predicted phosphohydrolase (DHH superfamily) YP_005425058.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005425059.1 COG1408 Predicted phosphohydrolases YP_005425060.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_005425061.1 COG0779 Uncharacterized protein conserved in bacteria YP_005425062.1 COG0858 Ribosome-binding factor A YP_005425063.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_005425064.1 COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination YP_005425065.1 COG0083 Homoserine kinase YP_005425066.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_005425067.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_005425068.1 COG0850 Septum formation inhibitor YP_005425069.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005425073.1 COG0413 Ketopantoate hydroxymethyltransferase YP_005425074.1 COG2255 Holliday junction resolvasome, helicase subunit YP_005425075.1 COG1826 Sec-independent protein secretion pathway components YP_005425076.1 COG0805 Sec-independent protein secretion pathway component TatC YP_005425077.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_005425078.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_005425082.1 COG0784 FOG: CheY-like receiver YP_005425083.1 COG2264 Ribosomal protein L11 methylase YP_005425084.1 COG0465 ATP-dependent Zn proteases YP_005425086.1 COG1183 Phosphatidylserine synthase YP_005425087.1 COG2608 Copper chaperone YP_005425091.1 COG3376 High-affinity nickel permease YP_005425093.1 COG1106 Predicted ATPases YP_005425094.1 COG1787 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes YP_005425095.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005425097.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_005425099.1 COG1189 Predicted rRNA methylase YP_005425100.1 COG0196 FAD synthase YP_005425101.1 COG0021 Transketolase YP_005425102.1 COG3893 Inactivated superfamily I helicase YP_005425103.1 COG0477 Permeases of the major facilitator superfamily YP_005425104.1 COG4786 Flagellar basal body rod protein YP_005425107.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_005425108.1 COG0481 Membrane GTPase LepA YP_005425109.1 COG1154 Deoxyxylulose-5-phosphate synthase YP_005425110.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_005425111.1 COG1536 Flagellar motor switch protein YP_005425112.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein YP_005425113.1 COG0671 Membrane-associated phospholipid phosphatase YP_005425114.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_005425115.1 COG0608 Single-stranded DNA-specific exonuclease YP_005425116.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005425120.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005425121.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_005425122.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_005425123.1 COG0851 Septum formation topological specificity factor YP_005425124.1 COG2894 Septum formation inhibitor-activating ATPase YP_005425125.1 COG0059 Ketol-acid reductoisomerase YP_005425126.1 COG0171 NAD synthase YP_005425127.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_005425128.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005425129.1 COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase YP_005425130.1 COG1083 CMP-N-acetylneuraminic acid synthetase YP_005425131.1 COG2063 Flagellar basal body L-ring protein YP_005425133.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005425135.1 COG0194 Guanylate kinase YP_005425136.1 COG1826 Sec-independent protein secretion pathway components YP_005425137.1 COG0018 Arginyl-tRNA synthetase YP_005425138.1 COG0748 Putative heme iron utilization protein YP_005425139.1 COG0477 Permeases of the major facilitator superfamily YP_005425140.1 COG0523 Putative GTPases (G3E family) YP_005425142.1 COG0726 Predicted xylanase/chitin deacetylase YP_005425143.1 COG0388 Predicted amidohydrolase YP_005425146.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_005425149.1 COG0536 Predicted GTPase YP_005425150.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005425151.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005425152.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005425153.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005425154.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005425155.1 COG0211 Ribosomal protein L27 YP_005425156.1 COG0261 Ribosomal protein L21 YP_005425157.1 COG1344 Flagellin and related hook-associated proteins YP_005425158.1 COG0675 Transposase and inactivated derivatives YP_005425159.1 COG1943 Transposase and inactivated derivatives YP_005425160.1 COG0388 Predicted amidohydrolase YP_005425161.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005425162.1 COG4866 Uncharacterized conserved protein YP_005425163.1 COG1605 Chorismate mutase YP_005425164.1 COG0019 Diaminopimelate decarboxylase YP_005425165.1 COG5651 PPE-repeat proteins YP_005425169.1 COG0465 ATP-dependent Zn proteases YP_005425170.1 COG0621 2-methylthioadenine synthetase YP_005425171.1 COG0668 Small-conductance mechanosensitive channel YP_005425172.1 COG0337 3-dehydroquinate synthetase YP_005425173.1 COG3400 Uncharacterized protein conserved in bacteria YP_005425174.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_005425175.1 COG1560 Lauroyl/myristoyl acyltransferase YP_005425176.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005425177.1 COG0248 Exopolyphosphatase YP_005425178.1 COG1145 Ferredoxin YP_005425180.1 COG0457 FOG: TPR repeat YP_005425181.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_005425185.1 COG2121 Uncharacterized protein conserved in bacteria YP_005425186.1 COG0621 2-methylthioadenine synthetase YP_005425188.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_005425189.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_005425190.1 COG0785 Cytochrome c biogenesis protein YP_005425191.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005425193.1 COG2189 Adenine specific DNA methylase Mod YP_005425194.1 COG1570 Exonuclease VII, large subunit YP_005425195.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_005425196.1 COG3334 Uncharacterized conserved protein YP_005425198.1 COG0104 Adenylosuccinate synthase YP_005425201.1 COG4239 ABC-type uncharacterized transport system, permease component YP_005425202.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_005425204.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005425205.1 COG0513 Superfamily II DNA and RNA helicases YP_005425206.1 COG1706 Flagellar basal-body P-ring protein YP_005425208.1 COG0642 Signal transduction histidine kinase YP_005425209.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_005425212.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005425213.1 COG0373 Glutamyl-tRNA reductase YP_005425214.1 COG0442 Prolyl-tRNA synthetase YP_005425215.1 COG0181 Porphobilinogen deaminase YP_005425217.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005425220.1 COG0754 Glutathionylspermidine synthase YP_005425222.1 COG1651 Protein-disulfide isomerase YP_005425223.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_005425225.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_005425227.1 COG0730 Predicted permeases YP_005425229.1 COG0225 Peptide methionine sulfoxide reductase YP_005425230.1 COG1066 Predicted ATP-dependent serine protease YP_005425232.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_005425233.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005425235.1 COG1881 Phospholipid-binding protein YP_005425238.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_005425239.1 COG0575 CDP-diglyceride synthetase YP_005425240.1 COG0471 Di- and tricarboxylate transporters YP_005425241.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_005425242.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005425243.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005425244.1 COG0326 Molecular chaperone, HSP90 family YP_005425247.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005425248.1 COG0489 ATPases involved in chromosome partitioning YP_005425249.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005425255.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_005425256.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_005425257.1 COG0333 Ribosomal protein L32 YP_005425259.1 COG0105 Nucleoside diphosphate kinase YP_005425260.1 COG0192 S-adenosylmethionine synthetase YP_005425261.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_005425262.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_005425263.1 COG0149 Triosephosphate isomerase YP_005425264.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_005425265.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_005425266.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_005425267.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005425268.1 COG2862 Predicted membrane protein YP_005425272.1 COG0112 Glycine/serine hydroxymethyltransferase YP_005425273.1 COG1190 Lysyl-tRNA synthetase (class II) YP_005425274.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_005425275.1 COG0815 Apolipoprotein N-acyltransferase YP_005425276.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005425277.1 COG2089 Sialic acid synthase YP_005425278.1 COG0675 Transposase and inactivated derivatives YP_005425279.1 COG0675 Transposase and inactivated derivatives YP_005425280.1 COG1943 Transposase and inactivated derivatives YP_005425281.1 COG0675 Transposase and inactivated derivatives YP_005425282.1 COG2452 Predicted site-specific integrase-resolvase YP_005425285.1 COG1432 Uncharacterized conserved protein YP_005425286.1 COG0335 Ribosomal protein L19 YP_005425287.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_005425288.1 COG0806 RimM protein, required for 16S rRNA processing YP_005425289.1 COG1837 Predicted RNA-binding protein (contains KH domain) YP_005425290.1 COG0228 Ribosomal protein S16 YP_005425291.1 COG0541 Signal recognition particle GTPase YP_005425292.1 COG0525 Valyl-tRNA synthetase YP_005425293.1 COG1699 Uncharacterized protein conserved in bacteria YP_005425294.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005425297.1 COG0345 Pyrroline-5-carboxylate reductase YP_005425298.1 COG2184 Protein involved in cell division YP_005425299.1 COG0319 Predicted metal-dependent hydrolase YP_005425300.1 COG0716 Flavodoxins YP_005425301.1 COG0586 Uncharacterized membrane-associated protein YP_005425302.1 COG3197 Uncharacterized protein, possibly involved in nitrogen fixation YP_005425303.1 COG0492 Thioredoxin reductase YP_005425304.1 COG0477 Permeases of the major facilitator superfamily YP_005425305.1 COG0166 Glucose-6-phosphate isomerase YP_005425307.1 COG1966 Carbon starvation protein, predicted membrane protein YP_005425308.1 COG0765 ABC-type amino acid transport system, permease component YP_005425309.1 COG0765 ABC-type amino acid transport system, permease component YP_005425310.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005425311.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005425314.1 COG0738 Fucose permease YP_005425315.1 COG2252 Permeases YP_005425318.1 COG0813 Purine-nucleoside phosphorylase YP_005425319.1 COG1015 Phosphopentomutase YP_005425320.1 COG1972 Nucleoside permease YP_005425321.1 COG0477 Permeases of the major facilitator superfamily YP_005425322.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005425323.1 COG0475 Kef-type K+ transport systems, membrane components YP_005425324.1 COG0534 Na+-driven multidrug efflux pump YP_005425326.1 COG2814 Arabinose efflux permease YP_005425328.1 COG3338 Carbonic anhydrase YP_005425332.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_005425333.1 COG0124 Histidyl-tRNA synthetase YP_005425334.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005425336.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_005425337.1 COG0480 Translation elongation factors (GTPases) YP_005425338.1 COG0049 Ribosomal protein S7 YP_005425339.1 COG0048 Ribosomal protein S12 YP_005425340.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005425341.1 COG0222 Ribosomal protein L7/L12 YP_005425342.1 COG0244 Ribosomal protein L10 YP_005425343.1 COG0081 Ribosomal protein L1 YP_005425344.1 COG0080 Ribosomal protein L11 YP_005425345.1 COG0250 Transcription antiterminator YP_005425347.1 COG0267 Ribosomal protein L33 YP_005425348.1 COG0050 GTPases - translation elongation factors YP_005425349.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005425350.1 COG0546 Predicted phosphatases YP_005425351.1 COG3392 Adenine-specific DNA methylase YP_005425355.1 COG1045 Serine acetyltransferase YP_005425356.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_005425357.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_005425358.1 COG1926 Predicted phosphoribosyltransferases YP_005425359.1 COG1452 Organic solvent tolerance protein OstA YP_005425361.1 COG0151 Phosphoribosylamine-glycine ligase YP_005425362.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005425363.1 COG0020 Undecaprenyl pyrophosphate synthase YP_005425364.1 COG0277 FAD/FMN-containing dehydrogenases YP_005425365.1 COG0607 Rhodanese-related sulfurtransferase YP_005425366.1 COG1587 Uroporphyrinogen-III synthase YP_005425367.1 COG0239 Integral membrane protein possibly involved in chromosome condensation YP_005425368.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005425369.1 COG2863 Cytochrome c553 YP_005425370.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005425371.1 COG0527 Aspartokinases YP_005425373.1 COG0470 ATPase involved in DNA replication YP_005425374.1 COG0294 Dihydropteroate synthase and related enzymes YP_005425376.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005425378.1 COG2952 Uncharacterized protein conserved in bacteria YP_005425379.1 COG0505 Carbamoylphosphate synthase small subunit YP_005425380.1 COG0388 Predicted amidohydrolase YP_005425383.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_005425384.1 COG0013 Alanyl-tRNA synthetase YP_005425385.1 COG2841 Uncharacterized protein conserved in bacteria YP_005425390.1 COG0238 Ribosomal protein S18 YP_005425391.1 COG0629 Single-stranded DNA-binding protein YP_005425392.1 COG0360 Ribosomal protein S6 YP_005425393.1 COG0470 ATPase involved in DNA replication YP_005425394.1 COG0557 Exoribonuclease R YP_005425395.1 COG0169 Shikimate 5-dehydrogenase YP_005425397.1 COG4174 ABC-type uncharacterized transport system, permease component YP_005425398.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_005425399.1 COG0180 Tryptophanyl-tRNA synthetase YP_005425400.1 COG0500 SAM-dependent methyltransferases YP_005425401.1 COG1314 Preprotein translocase subunit SecG YP_005425402.1 COG0233 Ribosome recycling factor YP_005425403.1 COG0461 Orotate phosphoribosyltransferase YP_005425404.1 COG1714 Predicted membrane protein/domain YP_005425405.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_005425406.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_005425407.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases YP_005425408.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_005425409.1 COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 YP_005425412.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_005425413.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_005425414.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_005425415.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_005425416.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) YP_005425417.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_005425418.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_005425419.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_005425420.1 COG0457 FOG: TPR repeat YP_005425421.1 COG1109 Phosphomannomutase YP_005425423.1 COG0159 Tryptophan synthase alpha chain YP_005425424.1 COG0133 Tryptophan synthase beta chain YP_005425425.1 COG0134 Indole-3-glycerol phosphate synthase YP_005425426.1 COG0547 Anthranilate phosphoribosyltransferase YP_005425427.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_005425428.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005425429.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005425430.1 COG2503 Predicted secreted acid phosphatase YP_005425431.1 COG2353 Uncharacterized conserved protein YP_005425432.1 COG0819 Putative transcription activator YP_005425436.1 COG3201 Nicotinamide mononucleotide transporter YP_005425437.1 COG1564 Thiamine pyrophosphokinase YP_005425439.1 COG0203 Ribosomal protein L17 YP_005425440.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_005425441.1 COG0522 Ribosomal protein S4 and related proteins YP_005425442.1 COG0100 Ribosomal protein S11 YP_005425443.1 COG0099 Ribosomal protein S13 YP_005425444.1 COG0257 Ribosomal protein L36 YP_005425445.1 COG0361 Translation initiation factor 1 (IF-1) YP_005425446.1 COG0024 Methionine aminopeptidase YP_005425447.1 COG0201 Preprotein translocase subunit SecY YP_005425448.1 COG0200 Ribosomal protein L15 YP_005425449.1 COG0098 Ribosomal protein S5 YP_005425450.1 COG0256 Ribosomal protein L18 YP_005425451.1 COG0097 Ribosomal protein L6P/L9E YP_005425452.1 COG0096 Ribosomal protein S8 YP_005425453.1 COG0199 Ribosomal protein S14 YP_005425454.1 COG0094 Ribosomal protein L5 YP_005425455.1 COG0198 Ribosomal protein L24 YP_005425456.1 COG0093 Ribosomal protein L14 YP_005425457.1 COG0186 Ribosomal protein S17 YP_005425458.1 COG0255 Ribosomal protein L29 YP_005425459.1 COG0197 Ribosomal protein L16/L10E YP_005425460.1 COG0092 Ribosomal protein S3 YP_005425461.1 COG0091 Ribosomal protein L22 YP_005425462.1 COG0185 Ribosomal protein S19 YP_005425463.1 COG0090 Ribosomal protein L2 YP_005425464.1 COG0089 Ribosomal protein L23 YP_005425465.1 COG0088 Ribosomal protein L4 YP_005425466.1 COG0087 Ribosomal protein L3 YP_005425467.1 COG0051 Ribosomal protein S10 YP_005425468.1 COG0305 Replicative DNA helicase YP_005425470.1 COG0164 Ribonuclease HII YP_005425472.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005425473.1 COG0114 Fumarase YP_005425476.1 COG0845 Membrane-fusion protein YP_005425477.1 COG3696 Putative silver efflux pump YP_005425478.1 COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance) YP_005425479.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) YP_005425480.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005425482.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005425483.1 COG2214 DnaJ-class molecular chaperone YP_005425484.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_005425485.1 COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain YP_005425486.1 COG0811 Biopolymer transport proteins YP_005425487.1 COG0848 Biopolymer transport protein YP_005425488.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_005425490.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005425491.1 COG0598 Mg2+ and Co2+ transporters YP_005425492.1 COG0126 3-phosphoglycerate kinase YP_005425493.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005425494.1 COG0692 Uracil DNA glycosylase YP_005425495.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005425497.1 COG0793 Periplasmic protease YP_005425499.1 COG0863 DNA modification methylase YP_005425500.1 COG4889 Predicted helicase YP_005425501.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005425502.1 COG0157 Nicotinate-nucleotide pyrophosphorylase YP_005425503.1 COG0379 Quinolinate synthase YP_005425504.1 COG0688 Phosphatidylserine decarboxylase YP_005425507.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_005425508.1 COG0658 Predicted membrane metal-binding protein YP_005425509.1 COG0305 Replicative DNA helicase YP_005425510.1 COG0062 Uncharacterized conserved protein YP_005425511.1 COG0642 Signal transduction histidine kinase YP_005425512.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005425513.1 COG0863 DNA modification methylase YP_005425514.1 COG2189 Adenine specific DNA methylase Mod YP_005425515.1 COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005425516.1 COG1792 Cell shape-determining protein YP_005425517.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_005425518.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_005425519.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_005425520.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005425521.1 COG1699 Uncharacterized protein conserved in bacteria YP_005425523.1 COG4105 DNA uptake lipoprotein YP_005425524.1 COG0466 ATP-dependent Lon protease, bacterial type YP_005425525.1 COG0287 Prephenate dehydrogenase YP_005425526.1 COG1864 DNA/RNA endonuclease G, NUC1 YP_005425527.1 COG2189 Adenine specific DNA methylase Mod YP_005425528.1 COG3421 Uncharacterized protein conserved in bacteria YP_005425529.1 COG0502 Biotin synthase and related enzymes YP_005425530.1 COG1295 Predicted membrane protein YP_005425534.1 COG1479 Uncharacterized conserved protein YP_005425539.1 COG0780 Enzyme related to GTP cyclohydrolase I YP_005425540.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_005425541.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005425542.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005425544.1 COG1943 Transposase and inactivated derivatives YP_005425545.1 COG0675 Transposase and inactivated derivatives YP_005425546.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_005425547.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_005425548.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_005425549.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005425550.1 COG0060 Isoleucyl-tRNA synthetase YP_005425551.1 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) YP_005425557.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_005425558.1 COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain YP_005425559.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_005425560.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_005425562.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005425563.1 COG0788 Formyltetrahydrofolate hydrolase YP_005425564.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005425571.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_005425572.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_005425573.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase YP_005425574.1 COG0691 tmRNA-binding protein YP_005425575.1 COG0811 Biopolymer transport proteins YP_005425576.1 COG0848 Biopolymer transport protein YP_005425577.1 COG0230 Ribosomal protein L34 YP_005425578.1 COG0594 RNase P protein component YP_005425579.1 COG0759 Uncharacterized conserved protein YP_005425580.1 COG0706 Preprotein translocase subunit YidC YP_005425581.1 COG0486 Predicted GTPase YP_005425585.1 COG0481 Membrane GTPase LepA YP_005425588.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005425589.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005425590.1 COG0587 DNA polymerase III, alpha subunit YP_005425591.1 COG1858 Cytochrome c peroxidase YP_005425593.1 COG3187 Heat shock protein YP_005425595.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_005425596.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_005425597.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_005425600.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005425602.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005425604.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005425606.1 COG0125 Thymidylate kinase YP_005425607.1 COG0669 Phosphopantetheine adenylyltransferase YP_005425608.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_005425610.1 COG1261 Flagellar basal body P-ring biosynthesis protein YP_005425611.1 COG0210 Superfamily I DNA and RNA helicases YP_005425612.1 COG0457 FOG: TPR repeat YP_005425613.1 COG0172 Seryl-tRNA synthetase YP_005425614.1 COG0388 Predicted amidohydrolase YP_005425615.1 COG1722 Exonuclease VII small subunit YP_005425616.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_005425617.1 COG1981 Predicted membrane protein YP_005425618.1 COG1739 Uncharacterized conserved protein YP_005425619.1 COG0842 ABC-type multidrug transport system, permease component YP_005425620.1 COG0842 ABC-type multidrug transport system, permease component YP_005425621.1 COG0845 Membrane-fusion protein YP_005425622.1 COG1538 Outer membrane protein YP_005425623.1 COG1253 Hemolysins and related proteins containing CBS domains YP_005425624.1 COG0306 Phosphate/sulphate permeases YP_005425625.1 COG0694 Thioredoxin-like proteins and domains YP_005425627.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_005425628.1 COG0176 Transaldolase YP_005425629.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_005425630.1 COG0193 Peptidyl-tRNA hydrolase YP_005425631.1 COG0795 Predicted permeases YP_005425632.1 COG3886 Predicted HKD family nuclease YP_005425634.1 COG3399 Uncharacterized protein conserved in bacteria YP_005425635.1 COG2217 Cation transport ATPase YP_005425636.1 COG4123 Predicted O-methyltransferase YP_005425637.1 COG0117 Pyrimidine deaminase YP_005425638.1 COG0786 Na+/glutamate symporter YP_005425639.1 COG1748 Saccharopine dehydrogenase and related proteins YP_005425640.1 COG0348 Polyferredoxin YP_005425641.1 COG0344 Predicted membrane protein YP_005425642.1 COG1539 Dihydroneopterin aldolase YP_005425644.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005425646.1 COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] YP_005425647.1 COG0195 Transcription elongation factor YP_005425651.1 COG3587 Restriction endonuclease YP_005425652.1 COG2189 Adenine specific DNA methylase Mod YP_005425653.1 COG1200 RecG-like helicase YP_005425656.1 COG0708 Exonuclease III YP_005425658.1 COG0593 ATPase involved in DNA replication initiation YP_005425659.1 COG0813 Purine-nucleoside phosphorylase YP_005425661.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_005425662.1 COG1351 Predicted alternative thymidylate synthase YP_005425664.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005425665.1 COG1451 Predicted metal-dependent hydrolase YP_005425666.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005425667.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_005425668.1 COG0833 Amino acid transporters YP_005425669.1 COG0686 Alanine dehydrogenase YP_005425670.1 COG1064 Zn-dependent alcohol dehydrogenases YP_005425671.1 COG1479 Uncharacterized conserved protein YP_005425673.1 COG0061 Predicted sugar kinase YP_005425674.1 COG0497 ATPase involved in DNA repair YP_005425675.1 COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP YP_005425677.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005425678.1 COG0036 Pentose-5-phosphate-3-epimerase YP_005425679.1 COG0158 Fructose-1,6-bisphosphatase YP_005425681.1 COG0827 Adenine-specific DNA methylase YP_005425683.1 COG0264 Translation elongation factor Ts YP_005425684.1 COG0052 Ribosomal protein S2 YP_005425685.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_005425686.1 COG3004 Na+/H+ antiporter YP_005425687.1 COG1862 Preprotein translocase subunit YajC YP_005425688.1 COG0342 Preprotein translocase subunit SecD YP_005425689.1 COG0341 Preprotein translocase subunit SecF YP_005425691.1 COG0495 Leucyl-tRNA synthetase YP_005425693.1 COG0285 Folylpolyglutamate synthase YP_005425694.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005425695.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005425696.1 COG1664 Integral membrane protein CcmA involved in cell shape determination YP_005425697.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_005425698.1 COG0723 Rieske Fe-S protein YP_005425699.1 COG1290 Cytochrome b subunit of the bc complex YP_005425700.1 COG2857 Cytochrome c1 YP_005425701.1 COG1943 Transposase and inactivated derivatives YP_005425702.1 COG0675 Transposase and inactivated derivatives YP_005425703.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_005425704.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_005425705.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005425706.1 COG1677 Flagellar hook-basal body protein YP_005425707.1 COG1558 Flagellar basal body rod protein YP_005425708.1 COG1815 Flagellar basal body protein YP_005425709.1 COG0772 Bacterial cell division membrane protein YP_005425710.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005425711.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005425712.1 COG0450 Peroxiredoxin YP_005425713.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_005425714.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005425716.1 COG0218 Predicted GTPase YP_005425717.1 COG1934 Uncharacterized protein conserved in bacteria YP_005425719.1 COG1778 Low specificity phosphatase (HAD superfamily) YP_005425720.1 COG0797 Lipoproteins YP_005425721.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005425722.1 COG0084 Mg-dependent DNase YP_005425723.1 COG0307 Riboflavin synthase alpha chain YP_005425724.1 COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB YP_005425725.1 COG1135 ABC-type metal ion transport system, ATPase component YP_005425726.1 COG2011 ABC-type metal ion transport system, permease component YP_005425728.1 COG0671 Membrane-associated phospholipid phosphatase YP_005425729.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005425730.1 COG0854 Pyridoxal phosphate biosynthesis protein YP_005425731.1 COG1995 Pyridoxal phosphate biosynthesis protein YP_005425732.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_005425733.1 COG4786 Flagellar basal body rod protein YP_005425736.1 COG4735 Uncharacterized protein conserved in bacteria YP_005425737.1 COG0675 Transposase and inactivated derivatives YP_005425739.1 COG3177 Uncharacterized conserved protein YP_005425740.1 COG5527 Protein involved in initiation of plasmid replication YP_005425742.1 COG1943 Transposase and inactivated derivatives