-- dump date 20140619_113444 -- class Genbank::CDS -- table cds_note -- id note YP_006218744.1 COG0781 Transcription termination factor YP_006218745.1 COG0054 Riboflavin synthase beta-chain YP_006218746.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_006218747.1 COG0288 Carbonic anhydrase YP_006218748.1 COG0284 Orotidine-5'-phosphate decarboxylase YP_006218749.1 COG0414 Panthothenate synthetase YP_006218752.1 COG0459 Chaperonin GroEL (HSP60 family) YP_006218753.1 COG0234 Co-chaperonin GroES (HSP10) YP_006218754.1 COG0358 DNA primase (bacterial type) YP_006218755.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_006218759.1 COG3451 Type IV secretory pathway, VirB4 components YP_006218760.1 COG3014 Uncharacterized protein conserved in bacteria YP_006218761.1 COG0835 Chemotaxis signal transduction protein YP_006218762.1 COG0019 Diaminopimelate decarboxylase YP_006218763.1 COG0671 Membrane-associated phospholipid phosphatase YP_006218764.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_006218768.1 COG0372 Citrate synthase YP_006218769.1 COG0538 Isocitrate dehydrogenases YP_006218771.1 COG0132 Dethiobiotin synthetase YP_006218772.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_006218773.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_006218774.1 COG2127 Uncharacterized conserved protein YP_006218775.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_006218776.1 COG0853 Aspartate 1-decarboxylase YP_006218777.1 COG0718 Uncharacterized protein conserved in bacteria YP_006218778.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_006218781.1 COG3736 Type IV secretory pathway, component VirB8 YP_006218782.1 COG3504 Type IV secretory pathway, VirB9 components YP_006218783.1 COG2948 Type IV secretory pathway, VirB10 components YP_006218784.1 COG0836 Mannose-1-phosphate guanylyltransferase YP_006218785.1 COG1089 GDP-D-mannose dehydratase YP_006218786.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_006218788.1 COG0309 Hydrogenase maturation factor YP_006218789.1 COG0068 Hydrogenase maturation factor YP_006218790.1 COG2957 Peptidylarginine deiminase and related enzymes YP_006218791.1 COG0863 DNA modification methylase YP_006218792.1 COG0270 Site-specific DNA methylase YP_006218793.1 COG0591 Na+/proline symporter YP_006218794.1 COG0506 Proline dehydrogenase YP_006218803.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_006218804.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_006218805.1 COG0829 Urease accessory protein UreH YP_006218806.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_006218807.1 COG0830 Urease accessory protein UreF YP_006218808.1 COG2371 Urease accessory protein UreE YP_006218809.1 COG1138 Cytochrome c biogenesis factor YP_006218811.1 COG0804 Urea amidohydrolase (urease) alpha subunit YP_006218812.1 COG0831 Urea amidohydrolase (urease) gamma subunit YP_006218814.1 COG0597 Lipoprotein signal peptidase YP_006218815.1 COG1109 Phosphomannomutase YP_006218816.1 COG0268 Ribosomal protein S20 YP_006218817.1 COG0216 Protein chain release factor A YP_006218820.1 COG0840 Methyl-accepting chemotaxis protein YP_006218821.1 COG0103 Ribosomal protein S9 YP_006218822.1 COG0102 Ribosomal protein L13 YP_006218824.1 COG0579 Predicted dehydrogenase YP_006218825.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_006218826.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_006218827.1 COG0775 Nucleoside phosphorylase YP_006218828.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_006218830.1 COG0863 DNA modification methylase YP_006218831.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_006218832.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_006218834.1 COG0498 Threonine synthase YP_006218835.1 COG0840 Methyl-accepting chemotaxis protein YP_006218836.1 COG1636 Uncharacterized protein conserved in bacteria YP_006218838.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_006218839.1 COG0840 Methyl-accepting chemotaxis protein YP_006218840.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_006218841.1 COG1854 LuxS protein involved in autoinducer AI2 synthesis YP_006218842.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_006218843.1 COG0031 Cysteine synthase YP_006218844.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_006218845.1 COG0443 Molecular chaperone YP_006218846.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_006218847.1 COG1420 Transcriptional regulator of heat shock gene YP_006218848.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_006218850.1 COG2604 Uncharacterized protein conserved in bacteria YP_006218851.1 COG1344 Flagellin and related hook-associated proteins YP_006218852.1 COG0550 Topoisomerase IA YP_006218853.1 COG0731 Fe-S oxidoreductases YP_006218855.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_006218857.1 COG0441 Threonyl-tRNA synthetase YP_006218858.1 COG0290 Translation initiation factor 3 (IF-3) YP_006218859.1 COG0291 Ribosomal protein L35 YP_006218860.1 COG0292 Ribosomal protein L20 YP_006218864.1 COG1760 L-serine deaminase YP_006218865.1 COG0814 Amino acid permeases YP_006218866.1 COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_006218868.1 COG1225 Peroxiredoxin YP_006218869.1 COG1556 Uncharacterized conserved protein YP_006218870.1 COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain YP_006218871.1 COG0247 Fe-S oxidoreductase YP_006218872.1 COG1620 L-lactate permease YP_006218873.1 COG1620 L-lactate permease YP_006218874.1 COG1194 A/G-specific DNA glycosylase YP_006218875.1 COG0471 Di- and tricarboxylate transporters YP_006218876.1 COG3278 Cbb3-type cytochrome oxidase, subunit 1 YP_006218877.1 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit YP_006218879.1 COG2010 Cytochrome c, mono- and diheme variants YP_006218882.1 COG0443 Molecular chaperone YP_006218885.1 COG2107 Predicted periplasmic solute-binding protein YP_006218886.1 COG0468 RecA/RadA recombinase YP_006218887.1 COG0148 Enolase YP_006218890.1 COG0703 Shikimate kinase YP_006218892.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_006218893.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006218894.1 COG0217 Uncharacterized conserved protein YP_006218895.1 COG0113 Delta-aminolevulinic acid dehydratase YP_006218896.1 COG0642 Signal transduction histidine kinase YP_006218897.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_006218899.1 COG0457 FOG: TPR repeat YP_006218900.1 COG0826 Collagenase and related proteases YP_006218901.1 COG0840 Methyl-accepting chemotaxis protein YP_006218902.1 COG1186 Protein chain release factor B YP_006218903.1 COG0303 Molybdopterin biosynthesis enzyme YP_006218904.1 COG1684 Flagellar biosynthesis pathway, component FliR YP_006218907.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_006218908.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_006218909.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_006218910.1 COG2089 Sialic acid synthase YP_006218911.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_006218912.1 COG0815 Apolipoprotein N-acyltransferase YP_006218913.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_006218914.1 COG1190 Lysyl-tRNA synthetase (class II) YP_006218915.1 COG0112 Glycine/serine hydroxymethyltransferase YP_006218918.1 COG2862 Predicted membrane protein YP_006218919.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_006218920.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_006218921.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_006218922.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_006218923.1 COG0149 Triosephosphate isomerase YP_006218924.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_006218925.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_006218926.1 COG0192 S-adenosylmethionine synthetase YP_006218927.1 COG0105 Nucleoside diphosphate kinase YP_006218929.1 COG0333 Ribosomal protein L32 YP_006218930.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_006218931.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_006218934.1 COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog YP_006218935.1 COG0489 ATPases involved in chromosome partitioning YP_006218936.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_006218939.1 COG0326 Molecular chaperone, HSP90 family YP_006218940.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006218941.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_006218942.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_006218943.1 COG0471 Di- and tricarboxylate transporters YP_006218944.1 COG0575 CDP-diglyceride synthetase YP_006218945.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_006218947.1 COG1881 Phospholipid-binding protein YP_006218949.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_006218950.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_006218951.1 COG1066 Predicted ATP-dependent serine protease YP_006218952.1 COG0225 Peptide methionine sulfoxide reductase YP_006218954.1 COG0730 Predicted permeases YP_006218956.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_006218958.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_006218959.1 COG1651 Protein-disulfide isomerase YP_006218961.1 COG0754 Glutathionylspermidine synthase YP_006218963.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006218965.1 COG0181 Porphobilinogen deaminase YP_006218966.1 COG0442 Prolyl-tRNA synthetase YP_006218967.1 COG0373 Glutamyl-tRNA reductase YP_006218968.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_006218971.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_006218972.1 COG0642 Signal transduction histidine kinase YP_006218974.1 COG1706 Flagellar basal-body P-ring protein YP_006218975.1 COG0513 Superfamily II DNA and RNA helicases YP_006218976.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_006218978.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_006218979.1 COG4239 ABC-type uncharacterized transport system, permease component YP_006218983.1 COG0104 Adenylosuccinate synthase YP_006218985.1 COG3334 Uncharacterized conserved protein YP_006218986.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_006218987.1 COG1570 Exonuclease VII, large subunit YP_006218988.1 COG2189 Adenine specific DNA methylase Mod YP_006218991.1 COG0863 DNA modification methylase YP_006218992.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_006218993.1 COG0785 Cytochrome c biogenesis protein YP_006218994.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_006218995.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_006218997.1 COG0621 2-methylthioadenine synthetase YP_006218998.1 COG2121 Uncharacterized protein conserved in bacteria YP_006219002.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_006219003.1 COG0457 FOG: TPR repeat YP_006219005.1 COG1145 Ferredoxin YP_006219006.1 COG0248 Exopolyphosphatase YP_006219007.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_006219008.1 COG1560 Lauroyl/myristoyl acyltransferase YP_006219009.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_006219010.1 COG3400 Uncharacterized protein conserved in bacteria YP_006219011.1 COG0337 3-dehydroquinate synthetase YP_006219012.1 COG0668 Small-conductance mechanosensitive channel YP_006219013.1 COG0621 2-methylthioadenine synthetase YP_006219014.1 COG0465 ATP-dependent Zn proteases YP_006219018.1 COG0019 Diaminopimelate decarboxylase YP_006219019.1 COG1605 Chorismate mutase YP_006219020.1 COG4866 Uncharacterized conserved protein YP_006219021.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_006219022.1 COG0388 Predicted amidohydrolase YP_006219023.1 COG1344 Flagellin and related hook-associated proteins YP_006219024.1 COG0261 Ribosomal protein L21 YP_006219025.1 COG0211 Ribosomal protein L27 YP_006219026.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_006219027.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_006219028.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_006219029.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_006219030.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_006219031.1 COG0536 Predicted GTPase YP_006219034.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_006219037.1 COG0388 Predicted amidohydrolase YP_006219038.1 COG0726 Predicted xylanase/chitin deacetylase YP_006219040.1 COG0523 Putative GTPases (G3E family) YP_006219041.1 COG0477 Permeases of the major facilitator superfamily YP_006219042.1 COG0748 Putative heme iron utilization protein YP_006219043.1 COG0018 Arginyl-tRNA synthetase YP_006219044.1 COG1826 Sec-independent protein secretion pathway components YP_006219045.1 COG0194 Guanylate kinase YP_006219048.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_006219050.1 COG2063 Flagellar basal body L-ring protein YP_006219051.1 COG1083 CMP-N-acetylneuraminic acid synthetase YP_006219052.1 COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase YP_006219053.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_006219054.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_006219055.1 COG0171 NAD synthase YP_006219056.1 COG0059 Ketol-acid reductoisomerase YP_006219057.1 COG2894 Septum formation inhibitor-activating ATPase YP_006219058.1 COG0851 Septum formation topological specificity factor YP_006219059.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_006219060.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_006219061.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006219064.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_006219065.1 COG0608 Single-stranded DNA-specific exonuclease YP_006219066.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_006219067.1 COG0671 Membrane-associated phospholipid phosphatase YP_006219068.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein YP_006219069.1 COG1536 Flagellar motor switch protein YP_006219070.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_006219071.1 COG1154 Deoxyxylulose-5-phosphate synthase YP_006219072.1 COG0481 Membrane GTPase LepA YP_006219073.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_006219075.1 COG4786 Flagellar basal body rod protein YP_006219076.1 COG0477 Permeases of the major facilitator superfamily YP_006219077.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_006219078.1 COG3893 Inactivated superfamily I helicase YP_006219079.1 COG0021 Transketolase YP_006219080.1 COG0196 FAD synthase YP_006219081.1 COG1189 Predicted rRNA methylase YP_006219083.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_006219085.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_006219087.1 COG1787 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes YP_006219088.1 COG1106 Predicted ATPases YP_006219090.1 COG3376 High-affinity nickel permease YP_006219095.1 COG2608 Copper chaperone YP_006219096.1 COG2217 Cation transport ATPase YP_006219097.1 COG1183 Phosphatidylserine synthase YP_006219099.1 COG0465 ATP-dependent Zn proteases YP_006219100.1 COG2264 Ribosomal protein L11 methylase YP_006219101.1 COG0784 FOG: CheY-like receiver YP_006219105.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_006219106.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_006219107.1 COG0805 Sec-independent protein secretion pathway component TatC YP_006219108.1 COG1826 Sec-independent protein secretion pathway components YP_006219109.1 COG2255 Holliday junction resolvasome, helicase subunit YP_006219110.1 COG0413 Ketopantoate hydroxymethyltransferase YP_006219114.1 COG0739 Membrane proteins related to metalloendopeptidases YP_006219115.1 COG0850 Septum formation inhibitor YP_006219116.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_006219117.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_006219118.1 COG0083 Homoserine kinase YP_006219119.1 COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination YP_006219120.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_006219121.1 COG0858 Ribosome-binding factor A YP_006219122.1 COG0779 Uncharacterized protein conserved in bacteria YP_006219123.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_006219124.1 COG1408 Predicted phosphohydrolases YP_006219125.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_006219126.1 COG2319 FOG: WD40 repeat YP_006219127.1 COG2404 Predicted phosphohydrolase (DHH superfamily) YP_006219128.1 COG1298 Flagellar biosynthesis pathway, component FlhA YP_006219129.1 COG0184 Ribosomal protein S15P/S13E YP_006219130.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_006219131.1 COG0757 3-dehydroquinate dehydratase II YP_006219132.1 COG0006 Xaa-Pro aminopeptidase YP_006219133.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_006219134.1 COG1419 Flagellar GTP-binding protein YP_006219135.1 COG0455 ATPases involved in chromosome partitioning YP_006219136.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_006219137.1 COG1868 Flagellar motor switch protein YP_006219138.1 COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation YP_006219139.1 COG2731 Beta-galactosidase, beta subunit YP_006219140.1 COG4731 Uncharacterized protein conserved in bacteria YP_006219141.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_006219142.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase YP_006219143.1 COG0789 Predicted transcriptional regulators YP_006219144.1 COG2214 DnaJ-class molecular chaperone YP_006219146.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_006219147.1 COG0784 FOG: CheY-like receiver YP_006219148.1 COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase YP_006219149.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_006219150.1 COG0833 Amino acid transporters YP_006219151.1 COG0558 Phosphatidylglycerophosphate synthase YP_006219153.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_006219154.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_006219155.1 COG0612 Predicted Zn-dependent peptidases YP_006219156.1 COG0167 Dihydroorotate dehydrogenase YP_006219157.1 COG0855 Polyphosphate kinase YP_006219158.1 COG0732 Restriction endonuclease S subunits YP_006219159.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_006219160.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_006219161.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_006219162.1 COG2604 Uncharacterized protein conserved in bacteria YP_006219165.1 COG2048 Heterodisulfide reductase, subunit B YP_006219167.1 COG1164 Oligoendopeptidase F YP_006219168.1 COG0475 Kef-type K+ transport systems, membrane components YP_006219170.1 COG0725 ABC-type molybdate transport system, periplasmic component YP_006219171.1 COG4149 ABC-type molybdate transport system, permease component YP_006219172.1 COG1118 ABC-type sulfate/molybdate transport systems, ATPase component YP_006219173.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_006219175.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_006219176.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_006219177.1 COG1217 Predicted membrane GTPase involved in stress response YP_006219178.1 COG0338 Site-specific DNA methylase YP_006219180.1 COG0270 Site-specific DNA methylase YP_006219181.1 COG0753 Catalase YP_006219187.1 COG1432 Uncharacterized conserved protein YP_006219188.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_006219189.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_006219190.1 COG0753 Catalase YP_006219193.1 COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism YP_006219194.1 COG2134 CDP-diacylglycerol pyrophosphatase YP_006219195.1 COG1749 Flagellar hook protein FlgE YP_006219196.1 COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) YP_006219198.1 COG0763 Lipid A disaccharide synthetase YP_006219199.1 COG0782 Transcription elongation factor YP_006219200.1 COG0756 dUTPase YP_006219203.1 COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor YP_006219204.1 COG2836 Uncharacterized conserved protein YP_006219205.1 COG0241 Histidinol phosphatase and related phosphatases YP_006219206.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_006219207.1 COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase YP_006219208.1 COG0279 Phosphoheptose isomerase YP_006219210.1 COG0516 IMP dehydrogenase/GMP reductase YP_006219211.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_006219212.1 COG2958 Uncharacterized protein conserved in bacteria YP_006219213.1 COG0671 Membrane-associated phospholipid phosphatase YP_006219214.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_006219215.1 COG0732 Restriction endonuclease S subunits YP_006219216.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_006219217.1 COG2145 Hydroxyethylthiazole kinase, sugar kinase family YP_006219218.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_006219219.1 COG0352 Thiamine monophosphate synthase YP_006219221.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_006219222.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_006219223.1 COG2067 Long-chain fatty acid transport protein YP_006219225.1 COG3018 Uncharacterized protein conserved in bacteria YP_006219226.1 COG0776 Bacterial nucleoid DNA-binding protein YP_006219227.1 COG1160 Predicted GTPases YP_006219229.1 COG0421 Spermidine synthase YP_006219230.1 COG0237 Dephospho-CoA kinase YP_006219231.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_006219232.1 COG0516 IMP dehydrogenase/GMP reductase YP_006219233.1 COG0356 F0F1-type ATP synthase, subunit a YP_006219234.1 COG0724 RNA-binding proteins (RRM domain) YP_006219235.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_006219236.1 COG0492 Thioredoxin reductase YP_006219237.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_006219238.1 COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase YP_006219239.1 COG0460 Homoserine dehydrogenase YP_006219240.1 COG0322 Nuclease subunit of the excinuclease complex YP_006219243.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components YP_006219244.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_006219246.1 COG1360 Flagellar motor protein YP_006219247.1 COG1291 Flagellar motor component YP_006219248.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_006219249.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_006219250.1 COG1565 Uncharacterized conserved protein YP_006219252.1 COG0742 N6-adenine-specific methylase YP_006219253.1 COG1580 Flagellar basal body-associated protein YP_006219254.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_006219255.1 COG4772 Outer membrane receptor for Fe3+-dicitrate YP_006219256.1 COG1451 Predicted metal-dependent hydrolase YP_006219257.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_006219259.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_006219261.1 COG0807 GTP cyclohydrolase II YP_006219262.1 COG1977 Molybdopterin converting factor, small subunit YP_006219263.1 COG0314 Molybdopterin converting factor, large subunit YP_006219264.1 COG0521 Molybdopterin biosynthesis enzymes YP_006219265.1 COG0315 Molybdenum cofactor biosynthesis enzyme YP_006219268.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_006219269.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_006219270.1 COG0242 N-formylmethionyl-tRNA deformylase YP_006219271.1 COG0606 Predicted ATPase with chaperone activity YP_006219272.1 COG2217 Cation transport ATPase YP_006219273.1 COG0270 Site-specific DNA methylase YP_006219276.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_006219277.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_006219278.1 COG2834 Outer membrane lipoprotein-sorting protein YP_006219283.1 COG1049 Aconitase B YP_006219284.1 COG1427 Predicted periplasmic solute-binding protein YP_006219285.1 COG0528 Uridylate kinase YP_006219286.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_006219287.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_006219288.1 COG0162 Tyrosyl-tRNA synthetase YP_006219289.1 COG2070 Dioxygenases related to 2-nitropropane dioxygenase YP_006219290.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_006219292.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_006219293.1 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A YP_006219294.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_006219296.1 COG1432 Uncharacterized conserved protein YP_006219297.1 COG0552 Signal recognition particle GTPase YP_006219299.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_006219300.1 COG1418 Predicted HD superfamily hydrolase YP_006219301.1 COG0534 Na+-driven multidrug efflux pump YP_006219302.1 COG2056 Predicted permease YP_006219304.1 COG0388 Predicted amidohydrolase YP_006219305.1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 YP_006219307.1 COG1516 Flagellin-specific chaperone FliS YP_006219308.1 COG1345 Flagellar capping protein YP_006219309.1 COG1334 Uncharacterized flagellar protein FlaG YP_006219310.1 COG4942 Membrane-bound metallopeptidase YP_006219311.1 COG2177 Cell division protein YP_006219312.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_006219313.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_006219314.1 COG3401 Fibronectin type 3 domain-containing protein YP_006219315.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_006219316.1 COG0772 Bacterial cell division membrane protein YP_006219317.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_006219318.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_006219319.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_006219320.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_006219321.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_006219322.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_006219323.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_006219324.1 COG2236 Predicted phosphoribosyltransferases YP_006219325.1 COG0621 2-methylthioadenine synthetase YP_006219327.1 COG0218 Predicted GTPase YP_006219330.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_006219331.1 COG0042 tRNA-dihydrouridine synthase YP_006219333.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_006219334.1 COG2704 Anaerobic C4-dicarboxylate transporter YP_006219338.1 COG1279 Lysine efflux permease YP_006219339.1 COG2812 DNA polymerase III, gamma/tau subunits YP_006219340.1 COG0802 Predicted ATPase or kinase YP_006219341.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_006219342.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_006219343.1 COG3177 Uncharacterized conserved protein YP_006219344.1 COG1896 Predicted hydrolases of HD superfamily YP_006219346.1 COG1912 Uncharacterized conserved protein YP_006219349.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_006219351.1 COG0178 Excinuclease ATPase subunit YP_006219356.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_006219358.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_006219359.1 COG0818 Diacylglycerol kinase YP_006219361.1 COG1479 Uncharacterized conserved protein YP_006219362.1 COG4647 Acetone carboxylase, gamma subunit YP_006219363.1 COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit YP_006219364.1 COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit YP_006219365.1 COG3528 Uncharacterized protein conserved in bacteria YP_006219366.1 COG2031 Short chain fatty acids transporter YP_006219367.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_006219368.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_006219369.1 COG0183 Acetyl-CoA acetyltransferase YP_006219370.1 COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB YP_006219371.1 COG0370 Fe2+ transport system protein B YP_006219372.1 COG1338 Flagellar biosynthesis pathway, component FliP YP_006219373.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_006219378.1 COG0209 Ribonucleotide reductase, alpha subunit YP_006219379.1 COG0673 Predicted dehydrogenases and related proteins YP_006219380.1 COG0730 Predicted permeases YP_006219381.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_006219382.1 COG0582 Integrase YP_006219384.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_006219386.1 COG4889 Predicted helicase YP_006219387.1 COG0247 Fe-S oxidoreductase YP_006219388.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_006219390.1 COG0082 Chorismate synthase YP_006219391.1 COG0571 dsRNA-specific ribonuclease YP_006219392.1 COG0328 Ribonuclease HI YP_006219393.1 COG2956 Predicted N-acetylglucosaminyl transferase YP_006219394.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_006219395.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_006219396.1 COG0612 Predicted Zn-dependent peptidases YP_006219397.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_006219398.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_006219399.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_006219400.1 COG1528 Ferritin-like protein YP_006219401.1 COG0560 Phosphoserine phosphatase YP_006219403.1 COG1573 Uracil-DNA glycosylase YP_006219404.1 COG1027 Aspartate ammonia-lyase YP_006219405.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_006219407.1 COG1210 UDP-glucose pyrophosphorylase YP_006219408.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_006219409.1 COG0762 Predicted integral membrane protein YP_006219410.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_006219411.1 COG0778 Nitroreductase YP_006219412.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_006219414.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_006219415.1 COG0603 Predicted PP-loop superfamily ATPase YP_006219420.1 COG0680 Ni,Fe-hydrogenase maturation factor YP_006219421.1 COG1969 Ni,Fe-hydrogenase I cytochrome b subunit YP_006219422.1 COG0374 Ni,Fe-hydrogenase I large subunit YP_006219423.1 COG1740 Ni,Fe-hydrogenase I small subunit YP_006219424.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_006219425.1 COG1479 Uncharacterized conserved protein YP_006219426.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006219427.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_006219428.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis YP_006219429.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_006219430.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_006219432.1 COG1193 Mismatch repair ATPase (MutS family) YP_006219433.1 COG0221 Inorganic pyrophosphatase YP_006219434.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_006219435.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_006219436.1 COG0563 Adenylate kinase and related kinases YP_006219437.1 COG0173 Aspartyl-tRNA synthetase YP_006219438.1 COG0835 Chemotaxis signal transduction protein YP_006219439.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_006219442.1 COG1131 ABC-type multidrug transport system, ATPase component YP_006219443.1 COG0842 ABC-type multidrug transport system, permease component YP_006219444.1 COG0842 ABC-type multidrug transport system, permease component YP_006219446.1 COG0015 Adenylosuccinate lyase YP_006219447.1 COG0841 Cation/multidrug efflux pump YP_006219448.1 COG0845 Membrane-fusion protein YP_006219449.1 COG1538 Outer membrane protein YP_006219450.1 COG0407 Uroporphyrinogen-III decarboxylase YP_006219452.1 COG2231 Uncharacterized protein related to Endonuclease III YP_006219453.1 COG1344 Flagellin and related hook-associated proteins YP_006219456.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_006219457.1 COG0840 Methyl-accepting chemotaxis protein YP_006219458.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_006219459.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_006219462.1 COG1495 Disulfide bond formation protein DsbB YP_006219464.1 COG5610 Predicted hydrolase (HAD superfamily) YP_006219465.1 COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit YP_006219466.1 COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit YP_006219467.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit YP_006219468.1 COG1146 Ferredoxin YP_006219469.1 COG1559 Predicted periplasmic solute-binding protein YP_006219471.1 COG1918 Fe2+ transport system protein A YP_006219472.1 COG0177 Predicted EndoIII-related endonuclease YP_006219473.1 COG1886 Flagellar motor switch/type III secretory pathway protein YP_006219475.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_006219476.1 COG0418 Dihydroorotase YP_006219477.1 COG4692 Predicted neuraminidase (sialidase) YP_006219479.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_006219480.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_006219481.1 COG0681 Signal peptidase I YP_006219482.1 COG1994 Zn-dependent proteases YP_006219483.1 COG0698 Ribose 5-phosphate isomerase RpiB YP_006219485.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_006219486.1 COG0586 Uncharacterized membrane-associated protein YP_006219487.1 COG0260 Leucyl aminopeptidase YP_006219488.1 COG0012 Predicted GTPase, probable translation factor YP_006219490.1 COG0628 Predicted permease YP_006219491.1 COG0253 Diaminopimelate epimerase YP_006219492.1 COG3059 Predicted membrane protein YP_006219495.1 COG0828 Ribosomal protein S21 YP_006219496.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_006219497.1 COG0236 Acyl carrier protein YP_006219499.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_006219500.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_006219502.1 COG1217 Predicted membrane GTPase involved in stress response YP_006219504.1 COG0566 rRNA methylases YP_006219505.1 COG0313 Predicted methyltransferases YP_006219506.1 COG0254 Ribosomal protein L31 YP_006219507.1 COG1158 Transcription termination factor YP_006219508.1 COG0796 Glutamate racemase YP_006219509.1 COG1112 Superfamily I DNA and RNA helicases and helicase subunits YP_006219510.1 COG1112 Superfamily I DNA and RNA helicases and helicase subunits YP_006219513.1 COG3034 Uncharacterized protein conserved in bacteria YP_006219514.1 COG1159 GTPase YP_006219515.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_006219516.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_006219517.1 COG0359 Ribosomal protein L9 YP_006219518.1 COG1479 Uncharacterized conserved protein YP_006219519.1 COG0174 Glutamine synthetase YP_006219520.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006219523.1 COG0148 Enolase YP_006219526.1 COG3505 Type IV secretory pathway, VirD4 components YP_006219527.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_006219530.1 COG3504 Type IV secretory pathway, VirB9 components YP_006219532.1 COG3736 Type IV secretory pathway, component VirB8 YP_006219540.1 COG0249 Mismatch repair ATPase (MutS family) YP_006219543.1 COG3451 Type IV secretory pathway, VirB4 components YP_006219547.1 COG0289 Dihydrodipicolinate reductase YP_006219548.1 COG0277 FAD/FMN-containing dehydrogenases YP_006219550.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_006219551.1 COG0739 Membrane proteins related to metalloendopeptidases YP_006219554.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_006219555.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_006219556.1 COG2829 Outer membrane phospholipase A YP_006219557.1 COG0733 Na+-dependent transporters of the SNF family YP_006219558.1 COG0733 Na+-dependent transporters of the SNF family YP_006219559.1 COG0824 Predicted thioesterase YP_006219561.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_006219562.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_006219564.1 COG0227 Ribosomal protein L28 YP_006219565.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_006219571.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_006219573.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_006219574.1 COG0215 Cysteinyl-tRNA synthetase YP_006219576.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_006219577.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_006219578.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_006219579.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_006219580.1 COG1607 Acyl-CoA hydrolase YP_006219584.1 COG0409 Hydrogenase maturation factor YP_006219585.1 COG0409 Hydrogenase maturation factor YP_006219586.1 COG0298 Hydrogenase maturation factor YP_006219587.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_006219589.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_006219590.1 COG0282 Acetate kinase YP_006219591.1 COG0282 Acetate kinase YP_006219592.1 COG0857 BioD-like N-terminal domain of phosphotransacetylase YP_006219594.1 COG1843 Flagellar hook capping protein YP_006219595.1 COG1749 Flagellar hook protein FlgE YP_006219597.1 COG0827 Adenine-specific DNA methylase YP_006219598.1 COG0210 Superfamily I DNA and RNA helicases YP_006219601.1 COG1190 Lysyl-tRNA synthetase (class II) YP_006219603.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_006219604.1 COG0009 Putative translation factor (SUA5) YP_006219605.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_006219606.1 COG0670 Integral membrane protein, interacts with FtsH YP_006219607.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_006219608.1 COG5651 PPE-repeat proteins YP_006219610.1 COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog YP_006219611.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_006219612.1 COG0585 Uncharacterized conserved protein YP_006219613.1 COG0501 Zn-dependent protease with chaperone function YP_006219614.1 COG0302 GTP cyclohydrolase I YP_006219615.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_006219616.1 COG0496 Predicted acid phosphatase YP_006219618.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_006219619.1 COG0602 Organic radical activating enzymes YP_006219620.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_006219622.1 COG0477 Permeases of the major facilitator superfamily YP_006219624.1 COG1479 Uncharacterized conserved protein YP_006219625.1 COG1479 Uncharacterized conserved protein YP_006219626.1 COG0765 ABC-type amino acid transport system, permease component YP_006219627.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_006219628.1 COG0787 Alanine racemase YP_006219629.1 COG1115 Na+/alanine symporter YP_006219630.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_006219631.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_006219632.1 COG1757 Na+/H+ antiporter YP_006219635.1 COG1576 Uncharacterized conserved protein YP_006219636.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_006219637.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_006219638.1 COG1546 Uncharacterized protein (competence- and mitomycin-induced) YP_006219640.1 COG0778 Nitroreductase YP_006219641.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_006219642.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_006219643.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_006219644.1 COG1579 Zn-ribbon protein, possibly nucleic acid-binding YP_006219645.1 COG0327 Uncharacterized conserved protein YP_006219646.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_006219647.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_006219648.1 COG0699 Predicted GTPases (dynamin-related) YP_006219649.1 COG0699 Predicted GTPases (dynamin-related) YP_006219651.1 COG3696 Putative silver efflux pump YP_006219652.1 COG0845 Membrane-fusion protein YP_006219654.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_006219655.1 COG1196 Chromosome segregation ATPases YP_006219656.1 COG0696 Phosphoglyceromutase YP_006219657.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_006219658.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_006219659.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_006219660.1 COG0849 Actin-like ATPase involved in cell division YP_006219661.1 COG0206 Cell division GTPase YP_006219663.1 COG0668 Small-conductance mechanosensitive channel YP_006219666.1 COG1479 Uncharacterized conserved protein YP_006219669.1 COG1166 Arginine decarboxylase (spermidine biosynthesis) YP_006219670.1 COG0438 Glycosyltransferase YP_006219671.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_006219672.1 COG0500 SAM-dependent methyltransferases YP_006219674.1 COG0143 Methionyl-tRNA synthetase YP_006219675.1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases YP_006219676.1 COG0668 Small-conductance mechanosensitive channel YP_006219680.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_006219683.1 COG0520 Selenocysteine lyase YP_006219684.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_006219685.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_006219686.1 COG0073 EMAP domain YP_006219687.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_006219688.1 COG0761 Penicillin tolerance protein YP_006219689.1 COG0539 Ribosomal protein S1 YP_006219691.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_006219692.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_006219693.1 COG0325 Predicted enzyme with a TIM-barrel fold YP_006219694.1 COG2908 Uncharacterized protein conserved in bacteria YP_006219695.1 COG0835 Chemotaxis signal transduction protein YP_006219696.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_006219697.1 COG0835 Chemotaxis signal transduction protein YP_006219698.1 COG2077 Peroxiredoxin YP_006219699.1 COG0605 Superoxide dismutase YP_006219700.1 COG0500 SAM-dependent methyltransferases YP_006219701.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_006219703.1 COG0055 F0F1-type ATP synthase, beta subunit YP_006219707.1 COG0501 Zn-dependent protease with chaperone function YP_006219708.1 COG2890 Methylase of polypeptide chain release factors YP_006219709.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_006219711.1 COG1333 ResB protein required for cytochrome c biosynthesis YP_006219712.1 COG2143 Thioredoxin-related protein YP_006219713.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_006219715.1 COG1385 Uncharacterized protein conserved in bacteria YP_006219717.1 COG0717 Deoxycytidine deaminase YP_006219718.1 COG0511 Biotin carboxyl carrier protein YP_006219719.1 COG0439 Biotin carboxylase YP_006219720.1 COG1015 Phosphopentomutase YP_006219722.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_006219723.1 COG0208 Ribonucleotide reductase, beta subunit YP_006219724.1 COG2518 Protein-L-isoaspartate carboxylmethyltransferase YP_006219725.1 COG0795 Predicted permeases YP_006219726.1 COG0101 Pseudouridylate synthase YP_006219727.1 COG1087 UDP-glucose 4-epimerase YP_006219729.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_006219730.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006219731.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_006219732.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_006219733.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_006219734.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_006219735.1 COG0837 Glucokinase YP_006219736.1 COG1064 Zn-dependent alcohol dehydrogenases YP_006219737.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_006219738.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_006219741.1 COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit YP_006219742.1 COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit YP_006219743.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit YP_006219744.1 COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit YP_006219745.1 COG0015 Adenylosuccinate lyase YP_006219747.1 COG0556 Helicase subunit of the DNA excision repair complex YP_006219753.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006219755.1 COG0405 Gamma-glutamyltransferase YP_006219756.1 COG1256 Flagellar hook-associated protein YP_006219758.1 COG0270 Site-specific DNA methylase YP_006219761.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_006219763.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_006219764.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_006219766.1 COG0848 Biopolymer transport protein YP_006219767.1 COG0811 Biopolymer transport proteins YP_006219768.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_006219769.1 COG0055 F0F1-type ATP synthase, beta subunit YP_006219770.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_006219771.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_006219775.1 COG1475 Predicted transcriptional regulators YP_006219776.1 COG1192 ATPases involved in chromosome partitioning YP_006219777.1 COG0340 Biotin-(acetyl-CoA carboxylase) ligase YP_006219778.1 COG0223 Methionyl-tRNA formyltransferase YP_006219779.1 COG4487 Uncharacterized protein conserved in bacteria YP_006219782.1 COG1432 Uncharacterized conserved protein YP_006219784.1 COG0335 Ribosomal protein L19 YP_006219785.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_006219786.1 COG0806 RimM protein, required for 16S rRNA processing YP_006219787.1 COG1837 Predicted RNA-binding protein (contains KH domain) YP_006219788.1 COG0228 Ribosomal protein S16 YP_006219789.1 COG0541 Signal recognition particle GTPase YP_006219790.1 COG0525 Valyl-tRNA synthetase YP_006219791.1 COG1699 Uncharacterized protein conserved in bacteria YP_006219792.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_006219795.1 COG0345 Pyrroline-5-carboxylate reductase YP_006219796.1 COG0319 Predicted metal-dependent hydrolase YP_006219797.1 COG0716 Flavodoxins YP_006219798.1 COG0586 Uncharacterized membrane-associated protein YP_006219799.1 COG3197 Uncharacterized protein, possibly involved in nitrogen fixation YP_006219800.1 COG0492 Thioredoxin reductase YP_006219801.1 COG0477 Permeases of the major facilitator superfamily YP_006219802.1 COG0166 Glucose-6-phosphate isomerase YP_006219804.1 COG1966 Carbon starvation protein, predicted membrane protein YP_006219805.1 COG0765 ABC-type amino acid transport system, permease component YP_006219806.1 COG0765 ABC-type amino acid transport system, permease component YP_006219807.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_006219808.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_006219810.1 COG0738 Fucose permease YP_006219811.1 COG2252 Permeases YP_006219813.1 COG0813 Purine-nucleoside phosphorylase YP_006219814.1 COG1015 Phosphopentomutase YP_006219815.1 COG1972 Nucleoside permease YP_006219817.1 COG0477 Permeases of the major facilitator superfamily YP_006219818.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_006219819.1 COG0475 Kef-type K+ transport systems, membrane components YP_006219820.1 COG0534 Na+-driven multidrug efflux pump YP_006219821.1 COG2814 Arabinose efflux permease YP_006219822.1 COG3338 Carbonic anhydrase YP_006219824.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_006219825.1 COG0124 Histidyl-tRNA synthetase YP_006219826.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_006219828.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_006219829.1 COG0480 Translation elongation factors (GTPases) YP_006219830.1 COG0049 Ribosomal protein S7 YP_006219831.1 COG0048 Ribosomal protein S12 YP_006219832.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_006219834.1 COG0222 Ribosomal protein L7/L12 YP_006219835.1 COG0244 Ribosomal protein L10 YP_006219836.1 COG0081 Ribosomal protein L1 YP_006219837.1 COG0080 Ribosomal protein L11 YP_006219838.1 COG0250 Transcription antiterminator YP_006219840.1 COG0267 Ribosomal protein L33 YP_006219841.1 COG0050 GTPases - translation elongation factors YP_006219842.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_006219843.1 COG0546 Predicted phosphatases YP_006219844.1 COG3392 Adenine-specific DNA methylase YP_006219846.1 COG1045 Serine acetyltransferase YP_006219847.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_006219848.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_006219849.1 COG1926 Predicted phosphoribosyltransferases YP_006219850.1 COG1452 Organic solvent tolerance protein OstA YP_006219852.1 COG0151 Phosphoribosylamine-glycine ligase YP_006219853.1 COG1131 ABC-type multidrug transport system, ATPase component YP_006219854.1 COG0020 Undecaprenyl pyrophosphate synthase YP_006219855.1 COG0607 Rhodanese-related sulfurtransferase YP_006219856.1 COG1587 Uroporphyrinogen-III synthase YP_006219857.1 COG0239 Integral membrane protein possibly involved in chromosome condensation YP_006219858.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_006219859.1 COG2863 Cytochrome c553 YP_006219861.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_006219862.1 COG0527 Aspartokinases YP_006219864.1 COG0470 ATPase involved in DNA replication YP_006219865.1 COG0294 Dihydropteroate synthase and related enzymes YP_006219867.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_006219869.1 COG2952 Uncharacterized protein conserved in bacteria YP_006219870.1 COG0505 Carbamoylphosphate synthase small subunit YP_006219871.1 COG0388 Predicted amidohydrolase YP_006219873.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_006219874.1 COG0013 Alanyl-tRNA synthetase YP_006219875.1 COG2841 Uncharacterized protein conserved in bacteria YP_006219878.1 COG0238 Ribosomal protein S18 YP_006219879.1 COG0629 Single-stranded DNA-binding protein YP_006219880.1 COG0360 Ribosomal protein S6 YP_006219882.1 COG1466 DNA polymerase III, delta subunit YP_006219883.1 COG0557 Exoribonuclease R YP_006219884.1 COG0169 Shikimate 5-dehydrogenase YP_006219886.1 COG4174 ABC-type uncharacterized transport system, permease component YP_006219887.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_006219888.1 COG0180 Tryptophanyl-tRNA synthetase YP_006219889.1 COG0500 SAM-dependent methyltransferases YP_006219890.1 COG1314 Preprotein translocase subunit SecG YP_006219891.1 COG0233 Ribosome recycling factor YP_006219892.1 COG0461 Orotate phosphoribosyltransferase YP_006219893.1 COG1714 Predicted membrane protein/domain YP_006219894.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_006219895.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_006219896.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases YP_006219897.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_006219898.1 COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 YP_006219901.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_006219902.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_006219903.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_006219904.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_006219905.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) YP_006219906.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_006219907.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_006219908.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_006219909.1 COG0457 FOG: TPR repeat YP_006219910.1 COG1109 Phosphomannomutase YP_006219914.1 COG4278 Uncharacterized conserved protein YP_006219915.1 COG1564 Thiamine pyrophosphokinase YP_006219916.1 COG3201 Nicotinamide mononucleotide transporter YP_006219919.1 COG0819 Putative transcription activator YP_006219920.1 COG2353 Uncharacterized conserved protein YP_006219921.1 COG2503 Predicted secreted acid phosphatase YP_006219922.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_006219923.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_006219924.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_006219925.1 COG0547 Anthranilate phosphoribosyltransferase YP_006219926.1 COG0134 Indole-3-glycerol phosphate synthase YP_006219927.1 COG0133 Tryptophan synthase beta chain YP_006219928.1 COG0159 Tryptophan synthase alpha chain YP_006219931.1 COG0203 Ribosomal protein L17 YP_006219932.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_006219933.1 COG0522 Ribosomal protein S4 and related proteins YP_006219934.1 COG0100 Ribosomal protein S11 YP_006219935.1 COG0099 Ribosomal protein S13 YP_006219936.1 COG0257 Ribosomal protein L36 YP_006219937.1 COG0361 Translation initiation factor 1 (IF-1) YP_006219938.1 COG0024 Methionine aminopeptidase YP_006219939.1 COG0201 Preprotein translocase subunit SecY YP_006219940.1 COG0200 Ribosomal protein L15 YP_006219941.1 COG0098 Ribosomal protein S5 YP_006219942.1 COG0256 Ribosomal protein L18 YP_006219943.1 COG0097 Ribosomal protein L6P/L9E YP_006219944.1 COG0096 Ribosomal protein S8 YP_006219945.1 COG0199 Ribosomal protein S14 YP_006219946.1 COG0094 Ribosomal protein L5 YP_006219947.1 COG0198 Ribosomal protein L24 YP_006219948.1 COG0093 Ribosomal protein L14 YP_006219949.1 COG0186 Ribosomal protein S17 YP_006219950.1 COG0255 Ribosomal protein L29 YP_006219951.1 COG0197 Ribosomal protein L16/L10E YP_006219952.1 COG0092 Ribosomal protein S3 YP_006219953.1 COG0091 Ribosomal protein L22 YP_006219954.1 COG0185 Ribosomal protein S19 YP_006219955.1 COG0090 Ribosomal protein L2 YP_006219956.1 COG0089 Ribosomal protein L23 YP_006219957.1 COG0088 Ribosomal protein L4 YP_006219958.1 COG0087 Ribosomal protein L3 YP_006219959.1 COG0051 Ribosomal protein S10 YP_006219960.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_006219962.1 COG0164 Ribonuclease HII YP_006219964.1 COG0114 Fumarase YP_006219967.1 COG0845 Membrane-fusion protein YP_006219968.1 COG3696 Putative silver efflux pump YP_006219969.1 COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance) YP_006219970.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) YP_006219971.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_006219973.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_006219974.1 COG2214 DnaJ-class molecular chaperone YP_006219975.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_006219976.1 COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain YP_006219977.1 COG0811 Biopolymer transport proteins YP_006219978.1 COG0848 Biopolymer transport protein YP_006219979.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_006219981.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_006219982.1 COG0598 Mg2+ and Co2+ transporters YP_006219983.1 COG0126 3-phosphoglycerate kinase YP_006219984.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_006219985.1 COG0692 Uracil DNA glycosylase YP_006219986.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_006219988.1 COG0793 Periplasmic protease YP_006219991.1 COG0863 DNA modification methylase YP_006219992.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_006219993.1 COG0157 Nicotinate-nucleotide pyrophosphorylase YP_006219994.1 COG0379 Quinolinate synthase YP_006219995.1 COG0688 Phosphatidylserine decarboxylase YP_006219998.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_006219999.1 COG0658 Predicted membrane metal-binding protein YP_006220000.1 COG0305 Replicative DNA helicase YP_006220001.1 COG0062 Uncharacterized conserved protein YP_006220002.1 COG0642 Signal transduction histidine kinase YP_006220003.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_006220004.1 COG2189 Adenine specific DNA methylase Mod YP_006220006.1 COG0338 Site-specific DNA methylase YP_006220007.1 COG2189 Adenine specific DNA methylase Mod YP_006220008.1 COG2189 Adenine specific DNA methylase Mod YP_006220009.1 COG0582 Integrase YP_006220014.1 COG0675 Transposase and inactivated derivatives YP_006220015.1 COG2452 Predicted site-specific integrase-resolvase YP_006220017.1 COG1598 Uncharacterized conserved protein YP_006220019.1 COG0675 Transposase and inactivated derivatives YP_006220020.1 COG1943 Transposase and inactivated derivatives YP_006220026.1 COG1792 Cell shape-determining protein YP_006220027.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_006220028.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_006220029.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_006220030.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_006220031.1 COG1699 Uncharacterized protein conserved in bacteria YP_006220033.1 COG4105 DNA uptake lipoprotein YP_006220034.1 COG0466 ATP-dependent Lon protease, bacterial type YP_006220035.1 COG0287 Prephenate dehydrogenase YP_006220036.1 COG1864 DNA/RNA endonuclease G, NUC1 YP_006220037.1 COG2189 Adenine specific DNA methylase Mod YP_006220038.1 COG3421 Uncharacterized protein conserved in bacteria YP_006220039.1 COG0502 Biotin synthase and related enzymes YP_006220040.1 COG1295 Predicted membrane protein YP_006220043.1 COG1479 Uncharacterized conserved protein YP_006220047.1 COG0780 Enzyme related to GTP cyclohydrolase I YP_006220048.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_006220049.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_006220050.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_006220051.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_006220052.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_006220053.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_006220054.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_006220055.1 COG0060 Isoleucyl-tRNA synthetase YP_006220056.1 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) YP_006220059.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_006220060.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_006220061.1 COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain YP_006220062.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_006220066.1 COG0732 Restriction endonuclease S subunits YP_006220067.1 COG0788 Formyltetrahydrofolate hydrolase YP_006220068.1 COG0616 Periplasmic serine proteases (ClpP class) YP_006220070.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_006220074.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_006220075.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_006220076.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase YP_006220077.1 COG0691 tmRNA-binding protein YP_006220078.1 COG0811 Biopolymer transport proteins YP_006220079.1 COG0848 Biopolymer transport protein YP_006220080.1 COG0230 Ribosomal protein L34 YP_006220081.1 COG0594 RNase P protein component YP_006220082.1 COG0759 Uncharacterized conserved protein YP_006220083.1 COG0706 Preprotein translocase subunit YidC YP_006220084.1 COG1315 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain YP_006220085.1 COG0486 Predicted GTPase YP_006220089.1 COG0481 Membrane GTPase LepA YP_006220092.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_006220093.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_006220094.1 COG0587 DNA polymerase III, alpha subunit YP_006220095.1 COG1858 Cytochrome c peroxidase YP_006220096.1 COG3187 Heat shock protein YP_006220098.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_006220099.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_006220100.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_006220102.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_006220104.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_006220105.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_006220107.1 COG0125 Thymidylate kinase YP_006220108.1 COG0669 Phosphopantetheine adenylyltransferase YP_006220109.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_006220111.1 COG1261 Flagellar basal body P-ring biosynthesis protein YP_006220112.1 COG0210 Superfamily I DNA and RNA helicases YP_006220113.1 COG0457 FOG: TPR repeat YP_006220114.1 COG0172 Seryl-tRNA synthetase YP_006220115.1 COG0388 Predicted amidohydrolase YP_006220116.1 COG1722 Exonuclease VII small subunit YP_006220117.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_006220118.1 COG1981 Predicted membrane protein YP_006220119.1 COG1739 Uncharacterized conserved protein YP_006220120.1 COG0842 ABC-type multidrug transport system, permease component YP_006220121.1 COG0842 ABC-type multidrug transport system, permease component YP_006220122.1 COG0845 Membrane-fusion protein YP_006220123.1 COG1538 Outer membrane protein YP_006220124.1 COG1253 Hemolysins and related proteins containing CBS domains YP_006220125.1 COG0306 Phosphate/sulphate permeases YP_006220126.1 COG0694 Thioredoxin-like proteins and domains YP_006220128.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_006220129.1 COG0176 Transaldolase YP_006220130.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_006220131.1 COG0193 Peptidyl-tRNA hydrolase YP_006220132.1 COG0795 Predicted permeases YP_006220133.1 COG0270 Site-specific DNA methylase YP_006220136.1 COG3399 Uncharacterized protein conserved in bacteria YP_006220137.1 COG2217 Cation transport ATPase YP_006220138.1 COG4123 Predicted O-methyltransferase YP_006220139.1 COG0117 Pyrimidine deaminase YP_006220140.1 COG0786 Na+/glutamate symporter YP_006220141.1 COG1748 Saccharopine dehydrogenase and related proteins YP_006220142.1 COG0348 Polyferredoxin YP_006220143.1 COG0344 Predicted membrane protein YP_006220144.1 COG1539 Dihydroneopterin aldolase YP_006220146.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_006220148.1 COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] YP_006220149.1 COG0195 Transcription elongation factor YP_006220151.1 COG1002 Type II restriction enzyme, methylase subunits YP_006220152.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase YP_006220153.1 COG3587 Restriction endonuclease YP_006220154.1 COG2189 Adenine specific DNA methylase Mod YP_006220155.1 COG1200 RecG-like helicase YP_006220158.1 COG0708 Exonuclease III YP_006220160.1 COG0593 ATPase involved in DNA replication initiation YP_006220161.1 COG0813 Purine-nucleoside phosphorylase YP_006220163.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_006220164.1 COG1351 Predicted alternative thymidylate synthase YP_006220166.1 COG0732 Restriction endonuclease S subunits YP_006220167.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_006220168.1 COG1451 Predicted metal-dependent hydrolase YP_006220169.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_006220170.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_006220171.1 COG0833 Amino acid transporters YP_006220172.1 COG0686 Alanine dehydrogenase YP_006220173.1 COG1479 Uncharacterized conserved protein YP_006220175.1 COG0061 Predicted sugar kinase YP_006220176.1 COG0497 ATPase involved in DNA repair YP_006220177.1 COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP YP_006220179.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_006220180.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_006220181.1 COG0036 Pentose-5-phosphate-3-epimerase YP_006220182.1 COG0158 Fructose-1,6-bisphosphatase YP_006220184.1 COG2264 Ribosomal protein L11 methylase YP_006220186.1 COG2857 Cytochrome c1 YP_006220187.1 COG1290 Cytochrome b subunit of the bc complex YP_006220188.1 COG0723 Rieske Fe-S protein YP_006220189.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_006220190.1 COG1664 Integral membrane protein CcmA involved in cell shape determination YP_006220191.1 COG0739 Membrane proteins related to metalloendopeptidases YP_006220192.1 COG0739 Membrane proteins related to metalloendopeptidases YP_006220193.1 COG0285 Folylpolyglutamate synthase YP_006220195.1 COG0495 Leucyl-tRNA synthetase YP_006220197.1 COG0341 Preprotein translocase subunit SecF YP_006220198.1 COG0342 Preprotein translocase subunit SecD YP_006220199.1 COG1862 Preprotein translocase subunit YajC YP_006220200.1 COG3004 Na+/H+ antiporter YP_006220201.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_006220203.1 COG0052 Ribosomal protein S2 YP_006220204.1 COG0264 Translation elongation factor Ts YP_006220205.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_006220206.1 COG1677 Flagellar hook-basal body protein YP_006220207.1 COG1558 Flagellar basal body rod protein YP_006220208.1 COG1815 Flagellar basal body protein YP_006220209.1 COG0772 Bacterial cell division membrane protein YP_006220210.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_006220211.1 COG0450 Peroxiredoxin YP_006220212.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_006220213.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_006220215.1 COG0218 Predicted GTPase YP_006220216.1 COG1934 Uncharacterized protein conserved in bacteria YP_006220218.1 COG1778 Low specificity phosphatase (HAD superfamily) YP_006220219.1 COG0797 Lipoproteins YP_006220220.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_006220221.1 COG0084 Mg-dependent DNase YP_006220222.1 COG0307 Riboflavin synthase alpha chain YP_006220223.1 COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB YP_006220224.1 COG1135 ABC-type metal ion transport system, ATPase component YP_006220225.1 COG2011 ABC-type metal ion transport system, permease component YP_006220227.1 COG0671 Membrane-associated phospholipid phosphatase YP_006220228.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_006220229.1 COG0854 Pyridoxal phosphate biosynthesis protein YP_006220230.1 COG1995 Pyridoxal phosphate biosynthesis protein YP_006220231.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_006220232.1 COG4786 Flagellar basal body rod protein YP_006220233.1 COG4735 Uncharacterized protein conserved in bacteria YP_006220235.1 COG4735 Uncharacterized protein conserved in bacteria YP_006220236.1 COG4735 Uncharacterized protein conserved in bacteria YP_006220238.1 COG3177 Uncharacterized conserved protein YP_006220239.1 COG5527 Protein involved in initiation of plasmid replication YP_006220242.1 COG3177 Uncharacterized conserved protein