-- dump date 20140619_113604 -- class Genbank::CDS -- table cds_note -- id note YP_005772181.1 COG0781 Transcription termination factor YP_005772182.1 COG0054 Riboflavin synthase beta-chain YP_005772183.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_005772184.1 COG0288 Carbonic anhydrase YP_005772185.1 COG0284 Orotidine-5'-phosphate decarboxylase YP_005772186.1 COG0414 Panthothenate synthetase YP_005772189.1 COG0459 Chaperonin GroEL (HSP60 family) YP_005772190.1 COG0234 Co-chaperonin GroES (HSP10) YP_005772191.1 COG0358 DNA primase (bacterial type) YP_005772192.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005772196.1 COG3451 Type IV secretory pathway, VirB4 components YP_005772197.1 COG3014 Uncharacterized protein conserved in bacteria YP_005772198.1 COG0835 Chemotaxis signal transduction protein YP_005772199.1 COG0019 Diaminopimelate decarboxylase YP_005772200.1 COG0671 Membrane-associated phospholipid phosphatase YP_005772201.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_005772204.1 COG0372 Citrate synthase YP_005772205.1 COG0538 Isocitrate dehydrogenases YP_005772207.1 COG0132 Dethiobiotin synthetase YP_005772208.1 COG0515 Serine/threonine protein kinase YP_005772209.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_005772210.1 COG2127 Uncharacterized conserved protein YP_005772211.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005772212.1 COG0853 Aspartate 1-decarboxylase YP_005772213.1 COG0718 Uncharacterized protein conserved in bacteria YP_005772214.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005772216.1 COG3736 Type IV secretory pathway, component VirB8 YP_005772217.1 COG3504 Type IV secretory pathway, VirB9 components YP_005772218.1 COG2948 Type IV secretory pathway, VirB10 components YP_005772219.1 COG0836 Mannose-1-phosphate guanylyltransferase YP_005772220.1 COG1089 GDP-D-mannose dehydratase YP_005772221.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005772223.1 COG0309 Hydrogenase maturation factor YP_005772224.1 COG0068 Hydrogenase maturation factor YP_005772225.1 COG2957 Peptidylarginine deiminase and related enzymes YP_005772226.1 COG0270 Site-specific DNA methylase YP_005772227.1 COG0591 Na+/proline symporter YP_005772228.1 COG0506 Proline dehydrogenase YP_005772234.1 COG0829 Urease accessory protein UreH YP_005772235.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_005772236.1 COG0830 Urease accessory protein UreF YP_005772237.1 COG2371 Urease accessory protein UreE YP_005772238.1 COG1138 Cytochrome c biogenesis factor YP_005772239.1 COG0804 Urea amidohydrolase (urease) alpha subunit YP_005772240.1 COG0831 Urea amidohydrolase (urease) gamma subunit YP_005772241.1 COG0597 Lipoprotein signal peptidase YP_005772242.1 COG1109 Phosphomannomutase YP_005772243.1 COG0268 Ribosomal protein S20 YP_005772244.1 COG0216 Protein chain release factor A YP_005772250.1 COG0840 Methyl-accepting chemotaxis protein YP_005772251.1 COG0103 Ribosomal protein S9 YP_005772252.1 COG0102 Ribosomal protein L13 YP_005772254.1 COG0579 Predicted dehydrogenase YP_005772255.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_005772256.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005772257.1 COG0775 Nucleoside phosphorylase YP_005772258.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005772259.1 COG2958 Uncharacterized protein conserved in bacteria YP_005772260.1 COG0863 DNA modification methylase YP_005772263.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_005772266.1 COG0498 Threonine synthase YP_005772267.1 COG0840 Methyl-accepting chemotaxis protein YP_005772268.1 COG1636 Uncharacterized protein conserved in bacteria YP_005772270.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005772271.1 COG0840 Methyl-accepting chemotaxis protein YP_005772272.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_005772273.1 COG1854 LuxS protein involved in autoinducer AI2 synthesis YP_005772274.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_005772275.1 COG0031 Cysteine synthase YP_005772277.1 COG0443 Molecular chaperone YP_005772278.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_005772279.1 COG1420 Transcriptional regulator of heat shock gene YP_005772280.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_005772282.1 COG2604 Uncharacterized protein conserved in bacteria YP_005772283.1 COG1344 Flagellin and related hook-associated proteins YP_005772284.1 COG0550 Topoisomerase IA YP_005772285.1 COG0731 Fe-S oxidoreductases YP_005772288.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_005772290.1 COG0441 Threonyl-tRNA synthetase YP_005772291.1 COG0290 Translation initiation factor 3 (IF-3) YP_005772292.1 COG0291 Ribosomal protein L35 YP_005772293.1 COG0292 Ribosomal protein L20 YP_005772299.1 COG1760 L-serine deaminase YP_005772300.1 COG0814 Amino acid permeases YP_005772301.1 COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_005772303.1 COG1225 Peroxiredoxin YP_005772304.1 COG1556 Uncharacterized conserved protein YP_005772305.1 COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain YP_005772306.1 COG0247 Fe-S oxidoreductase YP_005772307.1 COG1620 L-lactate permease YP_005772308.1 COG1620 L-lactate permease YP_005772309.1 COG1194 A/G-specific DNA glycosylase YP_005772310.1 COG0471 Di- and tricarboxylate transporters YP_005772311.1 COG3278 Cbb3-type cytochrome oxidase, subunit 1 YP_005772312.1 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit YP_005772314.1 COG2010 Cytochrome c, mono- and diheme variants YP_005772317.1 COG0443 Molecular chaperone YP_005772320.1 COG2107 Predicted periplasmic solute-binding protein YP_005772321.1 COG0468 RecA/RadA recombinase YP_005772322.1 COG0148 Enolase YP_005772325.1 COG0703 Shikimate kinase YP_005772327.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005772328.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005772331.1 COG0217 Uncharacterized conserved protein YP_005772332.1 COG0113 Delta-aminolevulinic acid dehydratase YP_005772333.1 COG0642 Signal transduction histidine kinase YP_005772334.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005772336.1 COG0457 FOG: TPR repeat YP_005772337.1 COG0826 Collagenase and related proteases YP_005772339.1 COG1186 Protein chain release factor B YP_005772340.1 COG0303 Molybdopterin biosynthesis enzyme YP_005772341.1 COG1684 Flagellar biosynthesis pathway, component FliR YP_005772344.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005772345.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_005772346.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005772347.1 COG2089 Sialic acid synthase YP_005772348.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005772349.1 COG0815 Apolipoprotein N-acyltransferase YP_005772350.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_005772351.1 COG1190 Lysyl-tRNA synthetase (class II) YP_005772352.1 COG0112 Glycine/serine hydroxymethyltransferase YP_005772355.1 COG2862 Predicted membrane protein YP_005772356.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005772357.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_005772358.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_005772359.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_005772360.1 COG0149 Triosephosphate isomerase YP_005772361.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_005772362.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_005772363.1 COG0192 S-adenosylmethionine synthetase YP_005772364.1 COG0105 Nucleoside diphosphate kinase YP_005772366.1 COG0333 Ribosomal protein L32 YP_005772367.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_005772368.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_005772371.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005772372.1 COG0489 ATPases involved in chromosome partitioning YP_005772373.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005772376.1 COG0326 Molecular chaperone, HSP90 family YP_005772377.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005772379.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005772380.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_005772381.1 COG0471 Di- and tricarboxylate transporters YP_005772382.1 COG0575 CDP-diglyceride synthetase YP_005772383.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_005772386.1 COG1881 Phospholipid-binding protein YP_005772388.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005772389.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_005772391.1 COG1066 Predicted ATP-dependent serine protease YP_005772392.1 COG0225 Peptide methionine sulfoxide reductase YP_005772393.1 COG0730 Predicted permeases YP_005772395.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_005772397.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_005772398.1 COG1651 Protein-disulfide isomerase YP_005772400.1 COG0754 Glutathionylspermidine synthase YP_005772402.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005772404.1 COG0181 Porphobilinogen deaminase YP_005772405.1 COG0442 Prolyl-tRNA synthetase YP_005772406.1 COG0373 Glutamyl-tRNA reductase YP_005772407.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005772410.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_005772411.1 COG0642 Signal transduction histidine kinase YP_005772413.1 COG1706 Flagellar basal-body P-ring protein YP_005772414.1 COG0513 Superfamily II DNA and RNA helicases YP_005772415.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005772417.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_005772418.1 COG4239 ABC-type uncharacterized transport system, permease component YP_005772422.1 COG0104 Adenylosuccinate synthase YP_005772424.1 COG3334 Uncharacterized conserved protein YP_005772425.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_005772426.1 COG1570 Exonuclease VII, large subunit YP_005772428.1 COG0863 DNA modification methylase YP_005772429.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005772430.1 COG0785 Cytochrome c biogenesis protein YP_005772431.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_005772432.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_005772434.1 COG0621 2-methylthioadenine synthetase YP_005772435.1 COG2121 Uncharacterized protein conserved in bacteria YP_005772439.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_005772440.1 COG0457 FOG: TPR repeat YP_005772441.1 COG0134 Indole-3-glycerol phosphate synthase YP_005772442.1 COG1145 Ferredoxin YP_005772443.1 COG0248 Exopolyphosphatase YP_005772444.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005772445.1 COG1560 Lauroyl/myristoyl acyltransferase YP_005772446.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_005772447.1 COG3400 Uncharacterized protein conserved in bacteria YP_005772448.1 COG0337 3-dehydroquinate synthetase YP_005772449.1 COG0668 Small-conductance mechanosensitive channel YP_005772450.1 COG0621 2-methylthioadenine synthetase YP_005772451.1 COG0465 ATP-dependent Zn proteases YP_005772455.1 COG0019 Diaminopimelate decarboxylase YP_005772456.1 COG1605 Chorismate mutase YP_005772457.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005772458.1 COG0388 Predicted amidohydrolase YP_005772459.1 COG1344 Flagellin and related hook-associated proteins YP_005772460.1 COG0261 Ribosomal protein L21 YP_005772461.1 COG0211 Ribosomal protein L27 YP_005772462.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005772463.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005772464.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005772465.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005772466.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005772467.1 COG0536 Predicted GTPase YP_005772470.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_005772473.1 COG0388 Predicted amidohydrolase YP_005772474.1 COG0726 Predicted xylanase/chitin deacetylase YP_005772476.1 COG0863 DNA modification methylase YP_005772478.1 COG0523 Putative GTPases (G3E family) YP_005772479.1 COG0477 Permeases of the major facilitator superfamily YP_005772481.1 COG0748 Putative heme iron utilization protein YP_005772482.1 COG0018 Arginyl-tRNA synthetase YP_005772483.1 COG1826 Sec-independent protein secretion pathway components YP_005772484.1 COG0194 Guanylate kinase YP_005772486.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005772488.1 COG2063 Flagellar basal body L-ring protein YP_005772489.1 COG1083 CMP-N-acetylneuraminic acid synthetase YP_005772490.1 COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase YP_005772491.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005772492.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_005772493.1 COG0171 NAD synthase YP_005772494.1 COG0059 Ketol-acid reductoisomerase YP_005772495.1 COG2894 Septum formation inhibitor-activating ATPase YP_005772496.1 COG0851 Septum formation topological specificity factor YP_005772497.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_005772498.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_005772499.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005772505.1 COG3326 Predicted membrane protein YP_005772508.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005772509.1 COG0608 Single-stranded DNA-specific exonuclease YP_005772510.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_005772511.1 COG0671 Membrane-associated phospholipid phosphatase YP_005772512.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein YP_005772513.1 COG1536 Flagellar motor switch protein YP_005772514.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_005772515.1 COG1154 Deoxyxylulose-5-phosphate synthase YP_005772516.1 COG0481 Membrane GTPase LepA YP_005772517.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_005772519.1 COG4786 Flagellar basal body rod protein YP_005772520.1 COG0477 Permeases of the major facilitator superfamily YP_005772521.1 COG3893 Inactivated superfamily I helicase YP_005772522.1 COG0021 Transketolase YP_005772523.1 COG0196 FAD synthase YP_005772524.1 COG1189 Predicted rRNA methylase YP_005772526.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_005772529.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005772530.1 COG1787 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes YP_005772531.1 COG1106 Predicted ATPases YP_005772533.1 COG3376 High-affinity nickel permease YP_005772536.1 COG2608 Copper chaperone YP_005772537.1 COG2217 Cation transport ATPase YP_005772538.1 COG1183 Phosphatidylserine synthase YP_005772540.1 COG0465 ATP-dependent Zn proteases YP_005772541.1 COG2264 Ribosomal protein L11 methylase YP_005772542.1 COG0784 FOG: CheY-like receiver YP_005772546.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_005772547.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_005772548.1 COG0805 Sec-independent protein secretion pathway component TatC YP_005772549.1 COG1826 Sec-independent protein secretion pathway components YP_005772550.1 COG2255 Holliday junction resolvasome, helicase subunit YP_005772551.1 COG0413 Ketopantoate hydroxymethyltransferase YP_005772553.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005772555.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005772556.1 COG0850 Septum formation inhibitor YP_005772557.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_005772558.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_005772559.1 COG0083 Homoserine kinase YP_005772560.1 COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination YP_005772561.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_005772562.1 COG0858 Ribosome-binding factor A YP_005772563.1 COG0779 Uncharacterized protein conserved in bacteria YP_005772564.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_005772565.1 COG1408 Predicted phosphohydrolases YP_005772566.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005772567.1 COG2404 Predicted phosphohydrolase (DHH superfamily) YP_005772568.1 COG1298 Flagellar biosynthesis pathway, component FlhA YP_005772569.1 COG0184 Ribosomal protein S15P/S13E YP_005772570.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_005772571.1 COG0757 3-dehydroquinate dehydratase II YP_005772572.1 COG0006 Xaa-Pro aminopeptidase YP_005772573.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_005772574.1 COG1419 Flagellar GTP-binding protein YP_005772575.1 COG0455 ATPases involved in chromosome partitioning YP_005772577.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005772578.1 COG1868 Flagellar motor switch protein YP_005772579.1 COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation YP_005772580.1 COG2731 Beta-galactosidase, beta subunit YP_005772581.1 COG4731 Uncharacterized protein conserved in bacteria YP_005772582.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_005772583.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase YP_005772584.1 COG0789 Predicted transcriptional regulators YP_005772585.1 COG2214 DnaJ-class molecular chaperone YP_005772587.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005772588.1 COG0784 FOG: CheY-like receiver YP_005772589.1 COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase YP_005772590.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005772591.1 COG0833 Amino acid transporters YP_005772592.1 COG0558 Phosphatidylglycerophosphate synthase YP_005772595.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005772596.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005772597.1 COG0612 Predicted Zn-dependent peptidases YP_005772598.1 COG0167 Dihydroorotate dehydrogenase YP_005772599.1 COG0855 Polyphosphate kinase YP_005772600.1 COG0732 Restriction endonuclease S subunits YP_005772601.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005772602.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005772604.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005772605.1 COG2604 Uncharacterized protein conserved in bacteria YP_005772608.1 COG2048 Heterodisulfide reductase, subunit B YP_005772610.1 COG1164 Oligoendopeptidase F YP_005772611.1 COG0475 Kef-type K+ transport systems, membrane components YP_005772613.1 COG0725 ABC-type molybdate transport system, periplasmic component YP_005772614.1 COG4149 ABC-type molybdate transport system, permease component YP_005772615.1 COG1118 ABC-type sulfate/molybdate transport systems, ATPase component YP_005772616.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005772619.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005772620.1 COG1217 Predicted membrane GTPase involved in stress response YP_005772621.1 COG0338 Site-specific DNA methylase YP_005772623.1 COG0270 Site-specific DNA methylase YP_005772624.1 COG0753 Catalase YP_005772631.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_005772632.1 COG0227 Ribosomal protein L28 YP_005772634.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005772635.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_005772637.1 COG0824 Predicted thioesterase YP_005772638.1 COG0733 Na+-dependent transporters of the SNF family YP_005772639.1 COG0733 Na+-dependent transporters of the SNF family YP_005772640.1 COG2829 Outer membrane phospholipase A YP_005772641.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_005772642.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005772644.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005772645.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005772647.1 COG0277 FAD/FMN-containing dehydrogenases YP_005772648.1 COG0289 Dihydrodipicolinate reductase YP_005772651.1 COG0174 Glutamine synthetase YP_005772652.1 COG1479 Uncharacterized conserved protein YP_005772653.1 COG0359 Ribosomal protein L9 YP_005772654.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_005772655.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_005772656.1 COG1159 GTPase YP_005772657.1 COG3034 Uncharacterized protein conserved in bacteria YP_005772658.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005772663.1 COG3505 Type IV secretory pathway, VirD4 components YP_005772664.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005772666.1 COG2948 Type IV secretory pathway, VirB10 components YP_005772667.1 COG3504 Type IV secretory pathway, VirB9 components YP_005772677.1 COG0249 Mismatch repair ATPase (MutS family) YP_005772680.1 COG3451 Type IV secretory pathway, VirB4 components YP_005772684.1 COG0419 ATPase involved in DNA repair YP_005772685.1 COG0796 Glutamate racemase YP_005772686.1 COG1158 Transcription termination factor YP_005772687.1 COG0254 Ribosomal protein L31 YP_005772688.1 COG0313 Predicted methyltransferases YP_005772689.1 COG0566 rRNA methylases YP_005772691.1 COG1217 Predicted membrane GTPase involved in stress response YP_005772694.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_005772695.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005772697.1 COG0236 Acyl carrier protein YP_005772698.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005772699.1 COG0828 Ribosomal protein S21 YP_005772702.1 COG3059 Predicted membrane protein YP_005772703.1 COG0253 Diaminopimelate epimerase YP_005772704.1 COG0628 Predicted permease YP_005772706.1 COG0012 Predicted GTPase, probable translation factor YP_005772707.1 COG0260 Leucyl aminopeptidase YP_005772708.1 COG0586 Uncharacterized membrane-associated protein YP_005772709.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_005772711.1 COG0698 Ribose 5-phosphate isomerase RpiB YP_005772712.1 COG1994 Zn-dependent proteases YP_005772713.1 COG0681 Signal peptidase I YP_005772714.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_005772715.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_005772718.1 COG4692 Predicted neuraminidase (sialidase) YP_005772719.1 COG0418 Dihydroorotase YP_005772720.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_005772722.1 COG1886 Flagellar motor switch/type III secretory pathway protein YP_005772723.1 COG0177 Predicted EndoIII-related endonuclease YP_005772724.1 COG1918 Fe2+ transport system protein A YP_005772726.1 COG1559 Predicted periplasmic solute-binding protein YP_005772727.1 COG1146 Ferredoxin YP_005772728.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit YP_005772729.1 COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit YP_005772730.1 COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit YP_005772732.1 COG1495 Disulfide bond formation protein DsbB YP_005772735.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_005772736.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_005772737.1 COG0840 Methyl-accepting chemotaxis protein YP_005772738.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005772739.1 COG1344 Flagellin and related hook-associated proteins YP_005772740.1 COG2231 Uncharacterized protein related to Endonuclease III YP_005772742.1 COG0407 Uroporphyrinogen-III decarboxylase YP_005772743.1 COG1538 Outer membrane protein YP_005772744.1 COG0845 Membrane-fusion protein YP_005772745.1 COG0841 Cation/multidrug efflux pump YP_005772746.1 COG0015 Adenylosuccinate lyase YP_005772748.1 COG0842 ABC-type multidrug transport system, permease component YP_005772749.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005772752.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_005772753.1 COG0835 Chemotaxis signal transduction protein YP_005772754.1 COG0173 Aspartyl-tRNA synthetase YP_005772755.1 COG0563 Adenylate kinase and related kinases YP_005772756.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_005772758.1 COG0221 Inorganic pyrophosphatase YP_005772760.1 COG1193 Mismatch repair ATPase (MutS family) YP_005772761.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_005772762.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_005772763.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005772764.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis YP_005772765.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_005772766.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005772768.1 COG1479 Uncharacterized conserved protein YP_005772769.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_005772770.1 COG1740 Ni,Fe-hydrogenase I small subunit YP_005772771.1 COG0374 Ni,Fe-hydrogenase I large subunit YP_005772772.1 COG1969 Ni,Fe-hydrogenase I cytochrome b subunit YP_005772773.1 COG0680 Ni,Fe-hydrogenase maturation factor YP_005772778.1 COG0603 Predicted PP-loop superfamily ATPase YP_005772779.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005772781.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_005772782.1 COG0778 Nitroreductase YP_005772783.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005772784.1 COG0762 Predicted integral membrane protein YP_005772785.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005772786.1 COG1210 UDP-glucose pyrophosphorylase YP_005772788.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_005772789.1 COG1027 Aspartate ammonia-lyase YP_005772790.1 COG1573 Uracil-DNA glycosylase YP_005772793.1 COG0560 Phosphoserine phosphatase YP_005772794.1 COG1528 Ferritin-like protein YP_005772795.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_005772796.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_005772797.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_005772798.1 COG0612 Predicted Zn-dependent peptidases YP_005772799.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_005772800.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005772802.1 COG0328 Ribonuclease HI YP_005772803.1 COG0571 dsRNA-specific ribonuclease YP_005772804.1 COG0082 Chorismate synthase YP_005772806.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005772807.1 COG0247 Fe-S oxidoreductase YP_005772809.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005772810.1 COG0582 Integrase YP_005772811.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005772812.1 COG0730 Predicted permeases YP_005772813.1 COG0673 Predicted dehydrogenases and related proteins YP_005772814.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005772817.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_005772819.1 COG1338 Flagellar biosynthesis pathway, component FliP YP_005772820.1 COG4772 Outer membrane receptor for Fe3+-dicitrate YP_005772821.1 COG0370 Fe2+ transport system protein B YP_005772822.1 COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB YP_005772823.1 COG0863 DNA modification methylase YP_005772825.1 COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB YP_005772826.1 COG0183 Acetyl-CoA acetyltransferase YP_005772827.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_005772828.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_005772829.1 COG2031 Short chain fatty acids transporter YP_005772830.1 COG3528 Uncharacterized protein conserved in bacteria YP_005772831.1 COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit YP_005772832.1 COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit YP_005772833.1 COG4647 Acetone carboxylase, gamma subunit YP_005772836.1 COG0818 Diacylglycerol kinase YP_005772837.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005772839.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_005772840.1 COG0178 Excinuclease ATPase subunit YP_005772842.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_005772845.1 COG1912 Uncharacterized conserved protein YP_005772846.1 COG1896 Predicted hydrolases of HD superfamily YP_005772848.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_005772849.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_005772850.1 COG0802 Predicted ATPase or kinase YP_005772851.1 COG2812 DNA polymerase III, gamma/tau subunits YP_005772852.1 COG1279 Lysine efflux permease YP_005772856.1 COG2704 Anaerobic C4-dicarboxylate transporter YP_005772857.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_005772860.1 COG0042 tRNA-dihydrouridine synthase YP_005772861.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005772865.1 COG0218 Predicted GTPase YP_005772868.1 COG0621 2-methylthioadenine synthetase YP_005772869.1 COG2236 Predicted phosphoribosyltransferases YP_005772870.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_005772871.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_005772872.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_005772873.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005772874.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_005772875.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005772876.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_005772877.1 COG0772 Bacterial cell division membrane protein YP_005772878.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005772879.1 COG3401 Fibronectin type 3 domain-containing protein YP_005772880.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_005772881.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005772882.1 COG2177 Cell division protein YP_005772883.1 COG4942 Membrane-bound metallopeptidase YP_005772884.1 COG1334 Uncharacterized flagellar protein FlaG YP_005772885.1 COG1345 Flagellar capping protein YP_005772886.1 COG1516 Flagellin-specific chaperone FliS YP_005772888.1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 YP_005772890.1 COG0388 Predicted amidohydrolase YP_005772891.1 COG2056 Predicted permease YP_005772892.1 COG0534 Na+-driven multidrug efflux pump YP_005772893.1 COG1418 Predicted HD superfamily hydrolase YP_005772894.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_005772896.1 COG0552 Signal recognition particle GTPase YP_005772897.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_005772901.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_005772902.1 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A YP_005772903.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_005772904.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_005772906.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_005772907.1 COG2070 Dioxygenases related to 2-nitropropane dioxygenase YP_005772908.1 COG0162 Tyrosyl-tRNA synthetase YP_005772909.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005772910.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_005772911.1 COG0528 Uridylate kinase YP_005772912.1 COG1427 Predicted periplasmic solute-binding protein YP_005772913.1 COG1049 Aconitase B YP_005772919.1 COG2834 Outer membrane lipoprotein-sorting protein YP_005772920.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_005772921.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_005772924.1 COG2217 Cation transport ATPase YP_005772925.1 COG0606 Predicted ATPase with chaperone activity YP_005772926.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005772927.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005772928.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_005772931.1 COG0315 Molybdenum cofactor biosynthesis enzyme YP_005772932.1 COG0521 Molybdopterin biosynthesis enzymes YP_005772933.1 COG0314 Molybdopterin converting factor, large subunit YP_005772934.1 COG1977 Molybdopterin converting factor, small subunit YP_005772935.1 COG0807 GTP cyclohydrolase II YP_005772937.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_005772939.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_005772940.1 COG1451 Predicted metal-dependent hydrolase YP_005772941.1 COG4772 Outer membrane receptor for Fe3+-dicitrate YP_005772942.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_005772943.1 COG1580 Flagellar basal body-associated protein YP_005772944.1 COG0742 N6-adenine-specific methylase YP_005772946.1 COG1565 Uncharacterized conserved protein YP_005772947.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005772948.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_005772949.1 COG1291 Flagellar motor component YP_005772950.1 COG1360 Flagellar motor protein YP_005772952.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components YP_005772953.1 COG0018 Arginyl-tRNA synthetase YP_005772954.1 COG0322 Nuclease subunit of the excinuclease complex YP_005772955.1 COG0460 Homoserine dehydrogenase YP_005772956.1 COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase YP_005772957.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005772958.1 COG0492 Thioredoxin reductase YP_005772959.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_005772960.1 COG0724 RNA-binding proteins (RRM domain) YP_005772962.1 COG0356 F0F1-type ATP synthase, subunit a YP_005772963.1 COG0516 IMP dehydrogenase/GMP reductase YP_005772964.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005772965.1 COG0237 Dephospho-CoA kinase YP_005772966.1 COG0421 Spermidine synthase YP_005772968.1 COG1160 Predicted GTPases YP_005772969.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005772970.1 COG3018 Uncharacterized protein conserved in bacteria YP_005772972.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_005772973.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_005772975.1 COG0352 Thiamine monophosphate synthase YP_005772976.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_005772977.1 COG2145 Hydroxyethylthiazole kinase, sugar kinase family YP_005772978.1 COG0732 Restriction endonuclease S subunits YP_005772979.1 COG0732 Restriction endonuclease S subunits YP_005772980.1 COG0671 Membrane-associated phospholipid phosphatase YP_005772981.1 COG2958 Uncharacterized protein conserved in bacteria YP_005772982.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005772983.1 COG0516 IMP dehydrogenase/GMP reductase YP_005772985.1 COG0279 Phosphoheptose isomerase YP_005772986.1 COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase YP_005772987.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005772988.1 COG0241 Histidinol phosphatase and related phosphatases YP_005772989.1 COG2836 Uncharacterized conserved protein YP_005772990.1 COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor YP_005772993.1 COG0756 dUTPase YP_005772994.1 COG0782 Transcription elongation factor YP_005772995.1 COG0763 Lipid A disaccharide synthetase YP_005772997.1 COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) YP_005772998.1 COG1749 Flagellar hook protein FlgE YP_005772999.1 COG2134 CDP-diacylglycerol pyrophosphatase YP_005773000.1 COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism YP_005773003.1 COG0753 Catalase YP_005773004.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005773005.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_005773006.1 COG1432 Uncharacterized conserved protein YP_005773010.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_005773012.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_005773013.1 COG0215 Cysteinyl-tRNA synthetase YP_005773016.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005773017.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_005773018.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005773019.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005773020.1 COG1607 Acyl-CoA hydrolase YP_005773028.1 COG0409 Hydrogenase maturation factor YP_005773029.1 COG0298 Hydrogenase maturation factor YP_005773030.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_005773032.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_005773033.1 COG0282 Acetate kinase YP_005773034.1 COG0282 Acetate kinase YP_005773035.1 COG0280 Phosphotransacetylase YP_005773036.1 COG0280 Phosphotransacetylase YP_005773039.1 COG1843 Flagellar hook capping protein YP_005773040.1 COG1749 Flagellar hook protein FlgE YP_005773042.1 COG0827 Adenine-specific DNA methylase YP_005773043.1 COG0210 Superfamily I DNA and RNA helicases YP_005773048.1 COG1190 Lysyl-tRNA synthetase (class II) YP_005773049.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005773051.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_005773052.1 COG0670 Integral membrane protein, interacts with FtsH YP_005773053.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005773056.1 COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog YP_005773057.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_005773058.1 COG0585 Uncharacterized conserved protein YP_005773059.1 COG0501 Zn-dependent protease with chaperone function YP_005773060.1 COG0302 GTP cyclohydrolase I YP_005773061.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005773062.1 COG0496 Predicted acid phosphatase YP_005773064.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_005773065.1 COG0602 Organic radical activating enzymes YP_005773066.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005773068.1 COG0477 Permeases of the major facilitator superfamily YP_005773070.1 COG1479 Uncharacterized conserved protein YP_005773071.1 COG0765 ABC-type amino acid transport system, permease component YP_005773072.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005773073.1 COG0787 Alanine racemase YP_005773074.1 COG1115 Na+/alanine symporter YP_005773075.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_005773076.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_005773079.1 COG1757 Na+/H+ antiporter YP_005773082.1 COG1576 Uncharacterized conserved protein YP_005773083.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_005773084.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_005773085.1 COG1546 Uncharacterized protein (competence- and mitomycin-induced) YP_005773087.1 COG0778 Nitroreductase YP_005773088.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_005773089.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005773090.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_005773091.1 COG1579 Zn-ribbon protein, possibly nucleic acid-binding YP_005773092.1 COG0327 Uncharacterized conserved protein YP_005773093.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_005773094.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_005773096.1 COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain YP_005773097.1 COG0699 Predicted GTPases (dynamin-related) YP_005773100.1 COG3696 Putative silver efflux pump YP_005773101.1 COG0845 Membrane-fusion protein YP_005773103.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_005773104.1 COG0466 ATP-dependent Lon protease, bacterial type YP_005773105.1 COG0696 Phosphoglyceromutase YP_005773106.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_005773107.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005773108.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005773109.1 COG0849 Actin-like ATPase involved in cell division YP_005773110.1 COG0206 Cell division GTPase YP_005773112.1 COG0668 Small-conductance mechanosensitive channel YP_005773115.1 COG0465 ATP-dependent Zn proteases YP_005773117.1 COG0515 Serine/threonine protein kinase YP_005773118.1 COG0631 Serine/threonine protein phosphatase YP_005773121.1 COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain YP_005773126.1 COG1479 Uncharacterized conserved protein YP_005773127.1 COG0608 Single-stranded DNA-specific exonuclease YP_005773130.1 COG1166 Arginine decarboxylase (spermidine biosynthesis) YP_005773131.1 COG0438 Glycosyltransferase YP_005773132.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_005773133.1 COG0500 SAM-dependent methyltransferases YP_005773135.1 COG0143 Methionyl-tRNA synthetase YP_005773136.1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases YP_005773137.1 COG0668 Small-conductance mechanosensitive channel YP_005773141.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_005773143.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_005773145.1 COG0520 Selenocysteine lyase YP_005773146.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005773147.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_005773148.1 COG0073 EMAP domain YP_005773149.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_005773150.1 COG0761 Penicillin tolerance protein YP_005773151.1 COG0539 Ribosomal protein S1 YP_005773153.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_005773154.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_005773155.1 COG0325 Predicted enzyme with a TIM-barrel fold YP_005773156.1 COG2908 Uncharacterized protein conserved in bacteria YP_005773157.1 COG0835 Chemotaxis signal transduction protein YP_005773158.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_005773159.1 COG0835 Chemotaxis signal transduction protein YP_005773160.1 COG2077 Peroxiredoxin YP_005773161.1 COG0605 Superoxide dismutase YP_005773162.1 COG0500 SAM-dependent methyltransferases YP_005773163.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_005773165.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005773168.1 COG0501 Zn-dependent protease with chaperone function YP_005773169.1 COG2890 Methylase of polypeptide chain release factors YP_005773170.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_005773172.1 COG1333 ResB protein required for cytochrome c biosynthesis YP_005773173.1 COG2143 Thioredoxin-related protein YP_005773174.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_005773176.1 COG1385 Uncharacterized protein conserved in bacteria YP_005773178.1 COG0717 Deoxycytidine deaminase YP_005773179.1 COG0511 Biotin carboxyl carrier protein YP_005773180.1 COG0439 Biotin carboxylase YP_005773184.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_005773185.1 COG0208 Ribonucleotide reductase, beta subunit YP_005773186.1 COG2518 Protein-L-isoaspartate carboxylmethyltransferase YP_005773187.1 COG0795 Predicted permeases YP_005773188.1 COG0101 Pseudouridylate synthase YP_005773189.1 COG1087 UDP-glucose 4-epimerase YP_005773191.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_005773192.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005773193.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_005773194.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_005773195.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_005773196.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_005773197.1 COG0837 Glucokinase YP_005773198.1 COG1064 Zn-dependent alcohol dehydrogenases YP_005773200.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005773204.1 COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit YP_005773205.1 COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit YP_005773206.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit YP_005773207.1 COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit YP_005773208.1 COG0015 Adenylosuccinate lyase YP_005773210.1 COG0556 Helicase subunit of the DNA excision repair complex YP_005773216.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005773218.1 COG0405 Gamma-glutamyltransferase YP_005773219.1 COG1256 Flagellar hook-associated protein YP_005773221.1 COG0270 Site-specific DNA methylase YP_005773224.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_005773226.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_005773227.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_005773229.1 COG0848 Biopolymer transport protein YP_005773230.1 COG0811 Biopolymer transport proteins YP_005773231.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_005773232.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005773233.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_005773234.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_005773236.1 COG0711 F0F1-type ATP synthase, subunit b YP_005773238.1 COG1475 Predicted transcriptional regulators YP_005773239.1 COG1192 ATPases involved in chromosome partitioning YP_005773240.1 COG0340 Biotin-(acetyl-CoA carboxylase) ligase YP_005773241.1 COG0223 Methionyl-tRNA formyltransferase YP_005773242.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005773243.1 COG4487 Uncharacterized protein conserved in bacteria YP_005773246.1 COG1432 Uncharacterized conserved protein YP_005773247.1 COG0335 Ribosomal protein L19 YP_005773248.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_005773249.1 COG0806 RimM protein, required for 16S rRNA processing YP_005773250.1 COG1837 Predicted RNA-binding protein (contains KH domain) YP_005773251.1 COG0228 Ribosomal protein S16 YP_005773252.1 COG0541 Signal recognition particle GTPase YP_005773253.1 COG0525 Valyl-tRNA synthetase YP_005773254.1 COG1699 Uncharacterized protein conserved in bacteria YP_005773255.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005773258.1 COG0345 Pyrroline-5-carboxylate reductase YP_005773259.1 COG2184 Protein involved in cell division YP_005773262.1 COG0319 Predicted metal-dependent hydrolase YP_005773263.1 COG0716 Flavodoxins YP_005773264.1 COG0586 Uncharacterized membrane-associated protein YP_005773265.1 COG3197 Uncharacterized protein, possibly involved in nitrogen fixation YP_005773266.1 COG0492 Thioredoxin reductase YP_005773267.1 COG0477 Permeases of the major facilitator superfamily YP_005773268.1 COG0166 Glucose-6-phosphate isomerase YP_005773269.1 COG0166 Glucose-6-phosphate isomerase YP_005773272.1 COG1966 Carbon starvation protein, predicted membrane protein YP_005773273.1 COG0765 ABC-type amino acid transport system, permease component YP_005773274.1 COG0765 ABC-type amino acid transport system, permease component YP_005773275.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005773276.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005773278.1 COG0738 Fucose permease YP_005773279.1 COG2252 Permeases YP_005773282.1 COG0813 Purine-nucleoside phosphorylase YP_005773283.1 COG1015 Phosphopentomutase YP_005773284.1 COG1972 Nucleoside permease YP_005773285.1 COG0477 Permeases of the major facilitator superfamily YP_005773286.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005773287.1 COG0475 Kef-type K+ transport systems, membrane components YP_005773288.1 COG0534 Na+-driven multidrug efflux pump YP_005773290.1 COG2814 Arabinose efflux permease YP_005773291.1 COG3338 Carbonic anhydrase YP_005773292.1 COG3845 ABC-type uncharacterized transport systems, ATPase components YP_005773293.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_005773294.1 COG0124 Histidyl-tRNA synthetase YP_005773295.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005773298.1 COG0480 Translation elongation factors (GTPases) YP_005773299.1 COG0049 Ribosomal protein S7 YP_005773300.1 COG0048 Ribosomal protein S12 YP_005773301.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005773303.1 COG0222 Ribosomal protein L7/L12 YP_005773304.1 COG0244 Ribosomal protein L10 YP_005773305.1 COG0081 Ribosomal protein L1 YP_005773306.1 COG0080 Ribosomal protein L11 YP_005773307.1 COG0250 Transcription antiterminator YP_005773308.1 COG0690 Preprotein translocase subunit SecE YP_005773309.1 COG0267 Ribosomal protein L33 YP_005773310.1 COG0050 GTPases - translation elongation factors YP_005773311.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005773312.1 COG0546 Predicted phosphatases YP_005773313.1 COG3392 Adenine-specific DNA methylase YP_005773315.1 COG1045 Serine acetyltransferase YP_005773316.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_005773317.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_005773318.1 COG1926 Predicted phosphoribosyltransferases YP_005773319.1 COG1452 Organic solvent tolerance protein OstA YP_005773321.1 COG0151 Phosphoribosylamine-glycine ligase YP_005773326.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005773327.1 COG0020 Undecaprenyl pyrophosphate synthase YP_005773328.1 COG0277 FAD/FMN-containing dehydrogenases YP_005773329.1 COG0607 Rhodanese-related sulfurtransferase YP_005773330.1 COG1587 Uroporphyrinogen-III synthase YP_005773331.1 COG0239 Integral membrane protein possibly involved in chromosome condensation YP_005773332.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005773333.1 COG2863 Cytochrome c553 YP_005773334.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005773335.1 COG0527 Aspartokinases YP_005773337.1 COG0470 ATPase involved in DNA replication YP_005773338.1 COG0294 Dihydropteroate synthase and related enzymes YP_005773340.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005773342.1 COG2952 Uncharacterized protein conserved in bacteria YP_005773343.1 COG0505 Carbamoylphosphate synthase small subunit YP_005773344.1 COG0388 Predicted amidohydrolase YP_005773347.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_005773348.1 COG0013 Alanyl-tRNA synthetase YP_005773349.1 COG2841 Uncharacterized protein conserved in bacteria YP_005773353.1 COG0238 Ribosomal protein S18 YP_005773354.1 COG0629 Single-stranded DNA-binding protein YP_005773355.1 COG0360 Ribosomal protein S6 YP_005773357.1 COG0470 ATPase involved in DNA replication YP_005773358.1 COG0557 Exoribonuclease R YP_005773359.1 COG0169 Shikimate 5-dehydrogenase YP_005773361.1 COG4174 ABC-type uncharacterized transport system, permease component YP_005773362.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_005773363.1 COG0180 Tryptophanyl-tRNA synthetase YP_005773364.1 COG0500 SAM-dependent methyltransferases YP_005773365.1 COG1314 Preprotein translocase subunit SecG YP_005773366.1 COG0233 Ribosome recycling factor YP_005773367.1 COG0461 Orotate phosphoribosyltransferase YP_005773369.1 COG1714 Predicted membrane protein/domain YP_005773370.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_005773371.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_005773372.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases YP_005773373.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_005773374.1 COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 YP_005773377.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_005773378.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_005773379.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_005773380.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_005773381.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) YP_005773382.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_005773383.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_005773384.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_005773385.1 COG0457 FOG: TPR repeat YP_005773386.1 COG1109 Phosphomannomutase YP_005773388.1 COG0159 Tryptophan synthase alpha chain YP_005773389.1 COG0133 Tryptophan synthase beta chain YP_005773390.1 COG0134 Indole-3-glycerol phosphate synthase YP_005773391.1 COG0547 Anthranilate phosphoribosyltransferase YP_005773392.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_005773393.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005773394.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005773395.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005773396.1 COG2503 Predicted secreted acid phosphatase YP_005773397.1 COG2353 Uncharacterized conserved protein YP_005773398.1 COG0819 Putative transcription activator YP_005773399.1 COG3201 Nicotinamide mononucleotide transporter YP_005773400.1 COG1564 Thiamine pyrophosphokinase YP_005773402.1 COG0203 Ribosomal protein L17 YP_005773403.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_005773404.1 COG0522 Ribosomal protein S4 and related proteins YP_005773405.1 COG0100 Ribosomal protein S11 YP_005773406.1 COG0099 Ribosomal protein S13 YP_005773407.1 COG0257 Ribosomal protein L36 YP_005773408.1 COG0361 Translation initiation factor 1 (IF-1) YP_005773409.1 COG0024 Methionine aminopeptidase YP_005773410.1 COG0201 Preprotein translocase subunit SecY YP_005773411.1 COG0200 Ribosomal protein L15 YP_005773412.1 COG0098 Ribosomal protein S5 YP_005773413.1 COG0256 Ribosomal protein L18 YP_005773414.1 COG0097 Ribosomal protein L6P/L9E YP_005773415.1 COG0096 Ribosomal protein S8 YP_005773416.1 COG0199 Ribosomal protein S14 YP_005773417.1 COG0094 Ribosomal protein L5 YP_005773418.1 COG0198 Ribosomal protein L24 YP_005773419.1 COG0093 Ribosomal protein L14 YP_005773420.1 COG0186 Ribosomal protein S17 YP_005773421.1 COG0255 Ribosomal protein L29 YP_005773422.1 COG0197 Ribosomal protein L16/L10E YP_005773423.1 COG0092 Ribosomal protein S3 YP_005773424.1 COG0091 Ribosomal protein L22 YP_005773425.1 COG0185 Ribosomal protein S19 YP_005773426.1 COG0090 Ribosomal protein L2 YP_005773427.1 COG0089 Ribosomal protein L23 YP_005773428.1 COG0088 Ribosomal protein L4 YP_005773429.1 COG0087 Ribosomal protein L3 YP_005773430.1 COG0051 Ribosomal protein S10 YP_005773431.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_005773433.1 COG0164 Ribonuclease HII YP_005773435.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005773436.1 COG0114 Fumarase YP_005773439.1 COG0845 Membrane-fusion protein YP_005773440.1 COG3696 Putative silver efflux pump YP_005773441.1 COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance) YP_005773442.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) YP_005773443.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005773445.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005773446.1 COG2214 DnaJ-class molecular chaperone YP_005773447.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_005773448.1 COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain YP_005773449.1 COG0811 Biopolymer transport proteins YP_005773450.1 COG0848 Biopolymer transport protein YP_005773451.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_005773453.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005773454.1 COG0598 Mg2+ and Co2+ transporters YP_005773455.1 COG0126 3-phosphoglycerate kinase YP_005773456.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005773457.1 COG0692 Uracil DNA glycosylase YP_005773458.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005773460.1 COG0793 Periplasmic protease YP_005773462.1 COG0863 DNA modification methylase YP_005773463.1 COG4889 Predicted helicase YP_005773464.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005773465.1 COG0157 Nicotinate-nucleotide pyrophosphorylase YP_005773466.1 COG0379 Quinolinate synthase YP_005773467.1 COG0379 Quinolinate synthase YP_005773468.1 COG0688 Phosphatidylserine decarboxylase YP_005773471.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_005773472.1 COG0658 Predicted membrane metal-binding protein YP_005773473.1 COG0305 Replicative DNA helicase YP_005773474.1 COG0062 Uncharacterized conserved protein YP_005773475.1 COG0642 Signal transduction histidine kinase YP_005773476.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005773477.1 COG0466 ATP-dependent Lon protease, bacterial type YP_005773478.1 COG0863 DNA modification methylase YP_005773479.1 COG0863 DNA modification methylase YP_005773481.1 COG1792 Cell shape-determining protein YP_005773482.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_005773483.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_005773484.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_005773485.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005773486.1 COG1699 Uncharacterized protein conserved in bacteria YP_005773488.1 COG4105 DNA uptake lipoprotein YP_005773489.1 COG0466 ATP-dependent Lon protease, bacterial type YP_005773490.1 COG0287 Prephenate dehydrogenase YP_005773491.1 COG1864 DNA/RNA endonuclease G, NUC1 YP_005773492.1 COG2189 Adenine specific DNA methylase Mod YP_005773493.1 COG3421 Uncharacterized protein conserved in bacteria YP_005773494.1 COG0502 Biotin synthase and related enzymes YP_005773495.1 COG1295 Predicted membrane protein YP_005773500.1 COG1479 Uncharacterized conserved protein YP_005773502.1 COG0780 Enzyme related to GTP cyclohydrolase I YP_005773503.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_005773504.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005773505.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005773506.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_005773507.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_005773508.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_005773509.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_005773510.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005773511.1 COG0060 Isoleucyl-tRNA synthetase YP_005773512.1 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) YP_005773515.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_005773516.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_005773517.1 COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain YP_005773518.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_005773521.1 COG0788 Formyltetrahydrofolate hydrolase YP_005773522.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005773530.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_005773531.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_005773532.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase YP_005773533.1 COG0691 tmRNA-binding protein YP_005773534.1 COG0811 Biopolymer transport proteins YP_005773535.1 COG0848 Biopolymer transport protein YP_005773536.1 COG0230 Ribosomal protein L34 YP_005773537.1 COG0594 RNase P protein component YP_005773538.1 COG0759 Uncharacterized conserved protein YP_005773539.1 COG0706 Preprotein translocase subunit YidC YP_005773540.1 COG0486 Predicted GTPase YP_005773545.1 COG0481 Membrane GTPase LepA YP_005773548.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005773549.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005773550.1 COG0587 DNA polymerase III, alpha subunit YP_005773551.1 COG1858 Cytochrome c peroxidase YP_005773553.1 COG3187 Heat shock protein YP_005773555.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_005773556.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_005773557.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_005773559.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005773561.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005773562.1 COG0732 Restriction endonuclease S subunits YP_005773564.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005773566.1 COG0125 Thymidylate kinase YP_005773567.1 COG0669 Phosphopantetheine adenylyltransferase YP_005773568.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_005773570.1 COG1261 Flagellar basal body P-ring biosynthesis protein YP_005773571.1 COG0210 Superfamily I DNA and RNA helicases YP_005773572.1 COG0457 FOG: TPR repeat YP_005773573.1 COG0172 Seryl-tRNA synthetase YP_005773574.1 COG0388 Predicted amidohydrolase YP_005773575.1 COG1722 Exonuclease VII small subunit YP_005773576.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_005773577.1 COG1981 Predicted membrane protein YP_005773578.1 COG1739 Uncharacterized conserved protein YP_005773579.1 COG0842 ABC-type multidrug transport system, permease component YP_005773580.1 COG0842 ABC-type multidrug transport system, permease component YP_005773581.1 COG0845 Membrane-fusion protein YP_005773582.1 COG1538 Outer membrane protein YP_005773583.1 COG1253 Hemolysins and related proteins containing CBS domains YP_005773584.1 COG0306 Phosphate/sulphate permeases YP_005773585.1 COG0694 Thioredoxin-like proteins and domains YP_005773587.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_005773588.1 COG0176 Transaldolase YP_005773589.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_005773590.1 COG0193 Peptidyl-tRNA hydrolase YP_005773591.1 COG0795 Predicted permeases YP_005773592.1 COG3392 Adenine-specific DNA methylase YP_005773593.1 COG0338 Site-specific DNA methylase YP_005773597.1 COG3399 Uncharacterized protein conserved in bacteria YP_005773598.1 COG2217 Cation transport ATPase YP_005773599.1 COG4123 Predicted O-methyltransferase YP_005773600.1 COG0117 Pyrimidine deaminase YP_005773601.1 COG0786 Na+/glutamate symporter YP_005773602.1 COG1748 Saccharopine dehydrogenase and related proteins YP_005773603.1 COG0348 Polyferredoxin YP_005773604.1 COG0344 Predicted membrane protein YP_005773605.1 COG1539 Dihydroneopterin aldolase YP_005773607.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005773608.1 COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] YP_005773609.1 COG0195 Transcription elongation factor YP_005773612.1 COG1002 Type II restriction enzyme, methylase subunits YP_005773613.1 COG3587 Restriction endonuclease YP_005773614.1 COG2189 Adenine specific DNA methylase Mod YP_005773615.1 COG2189 Adenine specific DNA methylase Mod YP_005773616.1 COG1200 RecG-like helicase YP_005773619.1 COG0708 Exonuclease III YP_005773621.1 COG0593 ATPase involved in DNA replication initiation YP_005773622.1 COG0813 Purine-nucleoside phosphorylase YP_005773624.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_005773625.1 COG1351 Predicted alternative thymidylate synthase YP_005773629.1 COG0732 Restriction endonuclease S subunits YP_005773630.1 COG3843 Type IV secretory pathway, VirD2 components (relaxase) YP_005773631.1 COG0582 Integrase YP_005773638.1 COG2963 Transposase and inactivated derivatives YP_005773644.1 COG1192 ATPases involved in chromosome partitioning YP_005773649.1 COG0550 Topoisomerase IA YP_005773653.1 COG0827 Adenine-specific DNA methylase YP_005773654.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005773655.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005773656.1 COG1451 Predicted metal-dependent hydrolase YP_005773657.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_005773658.1 COG0686 Alanine dehydrogenase YP_005773659.1 COG1479 Uncharacterized conserved protein YP_005773661.1 COG0061 Predicted sugar kinase YP_005773662.1 COG0497 ATPase involved in DNA repair YP_005773663.1 COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP YP_005773667.1 COG0270 Site-specific DNA methylase YP_005773669.1 COG0158 Fructose-1,6-bisphosphatase YP_005773670.1 COG0036 Pentose-5-phosphate-3-epimerase YP_005773671.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005773673.1 COG0264 Translation elongation factor Ts YP_005773674.1 COG0052 Ribosomal protein S2 YP_005773675.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_005773676.1 COG3004 Na+/H+ antiporter YP_005773677.1 COG1862 Preprotein translocase subunit YajC YP_005773678.1 COG0342 Preprotein translocase subunit SecD YP_005773679.1 COG0341 Preprotein translocase subunit SecF YP_005773681.1 COG0495 Leucyl-tRNA synthetase YP_005773683.1 COG0285 Folylpolyglutamate synthase YP_005773684.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005773685.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005773686.1 COG1664 Integral membrane protein CcmA involved in cell shape determination YP_005773687.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_005773688.1 COG0723 Rieske Fe-S protein YP_005773689.1 COG1290 Cytochrome b subunit of the bc complex YP_005773690.1 COG2010 Cytochrome c, mono- and diheme variants YP_005773693.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005773694.1 COG1677 Flagellar hook-basal body protein YP_005773695.1 COG1558 Flagellar basal body rod protein YP_005773696.1 COG1815 Flagellar basal body protein YP_005773697.1 COG0772 Bacterial cell division membrane protein YP_005773698.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005773699.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005773700.1 COG0450 Peroxiredoxin YP_005773701.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_005773703.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005773705.1 COG0218 Predicted GTPase YP_005773706.1 COG1934 Uncharacterized protein conserved in bacteria YP_005773708.1 COG1778 Low specificity phosphatase (HAD superfamily) YP_005773709.1 COG0797 Lipoproteins YP_005773710.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005773711.1 COG0084 Mg-dependent DNase YP_005773712.1 COG0307 Riboflavin synthase alpha chain YP_005773713.1 COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB YP_005773714.1 COG1135 ABC-type metal ion transport system, ATPase component YP_005773715.1 COG2011 ABC-type metal ion transport system, permease component YP_005773716.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005773718.1 COG0671 Membrane-associated phospholipid phosphatase YP_005773719.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005773720.1 COG0854 Pyridoxal phosphate biosynthesis protein YP_005773721.1 COG1995 Pyridoxal phosphate biosynthesis protein YP_005773722.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_005773723.1 COG4786 Flagellar basal body rod protein YP_005773726.1 COG4735 Uncharacterized protein conserved in bacteria YP_005773727.1 COG5527 Protein involved in initiation of plasmid replication YP_005773728.1 COG3177 Uncharacterized conserved protein YP_005773731.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005773734.1 COG1192 ATPases involved in chromosome partitioning YP_005773736.1 COG3843 Type IV secretory pathway, VirD2 components (relaxase) YP_005773739.1 COG3505 Type IV secretory pathway, VirD4 components YP_005773740.1 COG2948 Type IV secretory pathway, VirB10 components YP_005773744.1 COG3041 Uncharacterized protein conserved in bacteria