-- dump date 20140619_114029 -- class Genbank::CDS -- table cds_note -- id note YP_005764502.1 COG3177 Uncharacterized conserved protein YP_005764503.1 COG3843 Type IV secretory pathway, VirD2 components (relaxase) YP_005767666.1 COG0781 Transcription termination factor YP_005767667.1 COG0054 Riboflavin synthase beta-chain YP_005767668.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_005767669.1 COG0288 Carbonic anhydrase YP_005767670.1 COG0284 Orotidine-5'-phosphate decarboxylase YP_005767671.1 COG0414 Panthothenate synthetase YP_005767674.1 COG0459 Chaperonin GroEL (HSP60 family) YP_005767675.1 COG0234 Co-chaperonin GroES (HSP10) YP_005767676.1 COG0358 DNA primase (bacterial type) YP_005767677.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005767682.1 COG3451 Type IV secretory pathway, VirB4 components YP_005767683.1 COG3014 Uncharacterized protein conserved in bacteria YP_005767684.1 COG0835 Chemotaxis signal transduction protein YP_005767685.1 COG0019 Diaminopimelate decarboxylase YP_005767686.1 COG0671 Membrane-associated phospholipid phosphatase YP_005767687.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_005767690.1 COG0372 Citrate synthase YP_005767691.1 COG0538 Isocitrate dehydrogenases YP_005767693.1 COG0132 Dethiobiotin synthetase YP_005767695.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_005767697.1 COG2127 Uncharacterized conserved protein YP_005767698.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005767699.1 COG0853 Aspartate 1-decarboxylase YP_005767700.1 COG0718 Uncharacterized protein conserved in bacteria YP_005767701.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005767704.1 COG3736 Type IV secretory pathway, component VirB8 YP_005767705.1 COG3504 Type IV secretory pathway, VirB9 components YP_005767706.1 COG2948 Type IV secretory pathway, VirB10 components YP_005767707.1 COG0836 Mannose-1-phosphate guanylyltransferase YP_005767708.1 COG1089 GDP-D-mannose dehydratase YP_005767709.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005767711.1 COG0309 Hydrogenase maturation factor YP_005767712.1 COG0068 Hydrogenase maturation factor YP_005767713.1 COG2957 Peptidylarginine deiminase and related enzymes YP_005767714.1 COG0863 DNA modification methylase YP_005767715.1 COG0270 Site-specific DNA methylase YP_005767718.1 COG0591 Na+/proline symporter YP_005767719.1 COG0506 Proline dehydrogenase YP_005767721.1 COG5002 Signal transduction histidine kinase YP_005767723.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005767724.1 COG0829 Urease accessory protein UreH YP_005767725.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_005767726.1 COG0830 Urease accessory protein UreF YP_005767727.1 COG2371 Urease accessory protein UreE YP_005767728.1 COG1138 Cytochrome c biogenesis factor YP_005767730.1 COG0804 Urea amidohydrolase (urease) alpha subunit YP_005767731.1 COG0831 Urea amidohydrolase (urease) gamma subunit YP_005767732.1 COG0597 Lipoprotein signal peptidase YP_005767733.1 COG1109 Phosphomannomutase YP_005767734.1 COG0268 Ribosomal protein S20 YP_005767735.1 COG0216 Protein chain release factor A YP_005767740.1 COG0840 Methyl-accepting chemotaxis protein YP_005767741.1 COG0103 Ribosomal protein S9 YP_005767742.1 COG0102 Ribosomal protein L13 YP_005767744.1 COG0579 Predicted dehydrogenase YP_005767745.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_005767746.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005767747.1 COG0775 Nucleoside phosphorylase YP_005767748.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005767750.1 COG0863 DNA modification methylase YP_005767752.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_005767754.1 COG0498 Threonine synthase YP_005767755.1 COG0840 Methyl-accepting chemotaxis protein YP_005767756.1 COG1636 Uncharacterized protein conserved in bacteria YP_005767758.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005767759.1 COG0840 Methyl-accepting chemotaxis protein YP_005767760.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_005767761.1 COG1854 LuxS protein involved in autoinducer AI2 synthesis YP_005767762.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_005767763.1 COG0031 Cysteine synthase YP_005767765.1 COG0443 Molecular chaperone YP_005767766.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_005767767.1 COG1420 Transcriptional regulator of heat shock gene YP_005767768.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_005767770.1 COG2604 Uncharacterized protein conserved in bacteria YP_005767771.1 COG1344 Flagellin and related hook-associated proteins YP_005767772.1 COG0550 Topoisomerase IA YP_005767773.1 COG0731 Fe-S oxidoreductases YP_005767775.1 COG3845 ABC-type uncharacterized transport systems, ATPase components YP_005767776.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_005767778.1 COG0441 Threonyl-tRNA synthetase YP_005767779.1 COG0290 Translation initiation factor 3 (IF-3) YP_005767780.1 COG0291 Ribosomal protein L35 YP_005767781.1 COG0292 Ribosomal protein L20 YP_005767786.1 COG1760 L-serine deaminase YP_005767787.1 COG0814 Amino acid permeases YP_005767789.1 COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_005767791.1 COG1225 Peroxiredoxin YP_005767792.1 COG1556 Uncharacterized conserved protein YP_005767793.1 COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain YP_005767794.1 COG0247 Fe-S oxidoreductase YP_005767795.1 COG1620 L-lactate permease YP_005767796.1 COG1620 L-lactate permease YP_005767797.1 COG1194 A/G-specific DNA glycosylase YP_005767798.1 COG0471 Di- and tricarboxylate transporters YP_005767799.1 COG3278 Cbb3-type cytochrome oxidase, subunit 1 YP_005767800.1 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit YP_005767802.1 COG2010 Cytochrome c, mono- and diheme variants YP_005767805.1 COG0443 Molecular chaperone YP_005767808.1 COG2107 Predicted periplasmic solute-binding protein YP_005767809.1 COG0468 RecA/RadA recombinase YP_005767810.1 COG0148 Enolase YP_005767813.1 COG0703 Shikimate kinase YP_005767815.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005767816.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005767819.1 COG0217 Uncharacterized conserved protein YP_005767820.1 COG0113 Delta-aminolevulinic acid dehydratase YP_005767821.1 COG0642 Signal transduction histidine kinase YP_005767822.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005767824.1 COG0457 FOG: TPR repeat YP_005767825.1 COG0826 Collagenase and related proteases YP_005767826.1 COG0840 Methyl-accepting chemotaxis protein YP_005767827.1 COG1186 Protein chain release factor B YP_005767828.1 COG0303 Molybdopterin biosynthesis enzyme YP_005767829.1 COG1684 Flagellar biosynthesis pathway, component FliR YP_005767832.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005767833.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_005767834.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005767835.1 COG2089 Sialic acid synthase YP_005767836.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005767837.1 COG0815 Apolipoprotein N-acyltransferase YP_005767840.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_005767841.1 COG1190 Lysyl-tRNA synthetase (class II) YP_005767842.1 COG0112 Glycine/serine hydroxymethyltransferase YP_005767845.1 COG1479 Uncharacterized conserved protein YP_005767846.1 COG2862 Predicted membrane protein YP_005767847.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005767848.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_005767849.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_005767850.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_005767851.1 COG0149 Triosephosphate isomerase YP_005767852.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_005767853.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_005767854.1 COG0192 S-adenosylmethionine synthetase YP_005767855.1 COG0105 Nucleoside diphosphate kinase YP_005767857.1 COG0333 Ribosomal protein L32 YP_005767858.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_005767859.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_005767862.1 COG0489 ATPases involved in chromosome partitioning YP_005767863.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005767866.1 COG0326 Molecular chaperone, HSP90 family YP_005767867.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005767868.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005767869.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_005767870.1 COG0471 Di- and tricarboxylate transporters YP_005767871.1 COG0575 CDP-diglyceride synthetase YP_005767872.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_005767874.1 COG1881 Phospholipid-binding protein YP_005767876.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005767877.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_005767879.1 COG1066 Predicted ATP-dependent serine protease YP_005767880.1 COG0225 Peptide methionine sulfoxide reductase YP_005767882.1 COG0730 Predicted permeases YP_005767885.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_005767886.1 COG0419 ATPase involved in DNA repair YP_005767887.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_005767888.1 COG1651 Protein-disulfide isomerase YP_005767890.1 COG0754 Glutathionylspermidine synthase YP_005767892.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005767894.1 COG0181 Porphobilinogen deaminase YP_005767895.1 COG0442 Prolyl-tRNA synthetase YP_005767896.1 COG0373 Glutamyl-tRNA reductase YP_005767897.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005767900.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_005767901.1 COG0642 Signal transduction histidine kinase YP_005767903.1 COG1706 Flagellar basal-body P-ring protein YP_005767904.1 COG0513 Superfamily II DNA and RNA helicases YP_005767905.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005767907.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_005767908.1 COG4239 ABC-type uncharacterized transport system, permease component YP_005767912.1 COG0104 Adenylosuccinate synthase YP_005767914.1 COG3334 Uncharacterized conserved protein YP_005767915.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_005767916.1 COG1570 Exonuclease VII, large subunit YP_005767917.1 COG2189 Adenine specific DNA methylase Mod YP_005767920.1 COG0863 DNA modification methylase YP_005767921.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005767922.1 COG0785 Cytochrome c biogenesis protein YP_005767923.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_005767924.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_005767926.1 COG0621 2-methylthioadenine synthetase YP_005767927.1 COG2121 Uncharacterized protein conserved in bacteria YP_005767931.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_005767932.1 COG0457 FOG: TPR repeat YP_005767933.1 COG0134 Indole-3-glycerol phosphate synthase YP_005767934.1 COG1145 Ferredoxin YP_005767935.1 COG0248 Exopolyphosphatase YP_005767936.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005767937.1 COG1560 Lauroyl/myristoyl acyltransferase YP_005767938.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_005767939.1 COG3400 Uncharacterized protein conserved in bacteria YP_005767940.1 COG0337 3-dehydroquinate synthetase YP_005767941.1 COG0668 Small-conductance mechanosensitive channel YP_005767942.1 COG0621 2-methylthioadenine synthetase YP_005767943.1 COG0465 ATP-dependent Zn proteases YP_005767947.1 COG0019 Diaminopimelate decarboxylase YP_005767948.1 COG1605 Chorismate mutase YP_005767949.1 COG4866 Uncharacterized conserved protein YP_005767950.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005767951.1 COG0388 Predicted amidohydrolase YP_005767952.1 COG1344 Flagellin and related hook-associated proteins YP_005767953.1 COG0261 Ribosomal protein L21 YP_005767954.1 COG0211 Ribosomal protein L27 YP_005767955.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005767956.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005767957.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005767958.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005767959.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005767960.1 COG0536 Predicted GTPase YP_005767963.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_005767966.1 COG0388 Predicted amidohydrolase YP_005767967.1 COG0726 Predicted xylanase/chitin deacetylase YP_005767969.1 COG0863 DNA modification methylase YP_005767971.1 COG0523 Putative GTPases (G3E family) YP_005767972.1 COG0477 Permeases of the major facilitator superfamily YP_005767973.1 COG0748 Putative heme iron utilization protein YP_005767974.1 COG0018 Arginyl-tRNA synthetase YP_005767975.1 COG1826 Sec-independent protein secretion pathway components YP_005767976.1 COG0194 Guanylate kinase YP_005767979.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005767981.1 COG2063 Flagellar basal body L-ring protein YP_005767982.1 COG1083 CMP-N-acetylneuraminic acid synthetase YP_005767983.1 COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase YP_005767984.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005767985.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_005767986.1 COG0171 NAD synthase YP_005767987.1 COG0059 Ketol-acid reductoisomerase YP_005767988.1 COG2894 Septum formation inhibitor-activating ATPase YP_005767989.1 COG0851 Septum formation topological specificity factor YP_005767990.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_005767991.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_005767992.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005767998.1 COG3326 Predicted membrane protein YP_005768001.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005768002.1 COG0608 Single-stranded DNA-specific exonuclease YP_005768003.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_005768004.1 COG0671 Membrane-associated phospholipid phosphatase YP_005768005.1 COG1536 Flagellar motor switch protein YP_005768006.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_005768007.1 COG1154 Deoxyxylulose-5-phosphate synthase YP_005768008.1 COG0481 Membrane GTPase LepA YP_005768009.1 COG0270 Site-specific DNA methylase YP_005768011.1 COG4786 Flagellar basal body rod protein YP_005768012.1 COG0477 Permeases of the major facilitator superfamily YP_005768013.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005768014.1 COG3893 Inactivated superfamily I helicase YP_005768015.1 COG0021 Transketolase YP_005768016.1 COG0196 FAD synthase YP_005768017.1 COG1189 Predicted rRNA methylase YP_005768019.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_005768021.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005768023.1 COG1787 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes YP_005768024.1 COG1106 Predicted ATPases YP_005768026.1 COG3376 High-affinity nickel permease YP_005768031.1 COG2608 Copper chaperone YP_005768032.1 COG2217 Cation transport ATPase YP_005768033.1 COG1183 Phosphatidylserine synthase YP_005768035.1 COG0465 ATP-dependent Zn proteases YP_005768036.1 COG2264 Ribosomal protein L11 methylase YP_005768037.1 COG0784 FOG: CheY-like receiver YP_005768041.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_005768042.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_005768043.1 COG0805 Sec-independent protein secretion pathway component TatC YP_005768044.1 COG1826 Sec-independent protein secretion pathway components YP_005768045.1 COG2255 Holliday junction resolvasome, helicase subunit YP_005768046.1 COG0413 Ketopantoate hydroxymethyltransferase YP_005768048.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_005768050.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005768051.1 COG0850 Septum formation inhibitor YP_005768052.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_005768053.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_005768054.1 COG0083 Homoserine kinase YP_005768056.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_005768057.1 COG0858 Ribosome-binding factor A YP_005768058.1 COG0779 Uncharacterized protein conserved in bacteria YP_005768059.1 COG1408 Predicted phosphohydrolases YP_005768060.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005768061.1 COG2404 Predicted phosphohydrolase (DHH superfamily) YP_005768062.1 COG1298 Flagellar biosynthesis pathway, component FlhA YP_005768063.1 COG0184 Ribosomal protein S15P/S13E YP_005768064.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_005768065.1 COG0757 3-dehydroquinate dehydratase II YP_005768066.1 COG0006 Xaa-Pro aminopeptidase YP_005768067.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_005768068.1 COG1419 Flagellar GTP-binding protein YP_005768069.1 COG0455 ATPases involved in chromosome partitioning YP_005768071.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005768072.1 COG1868 Flagellar motor switch protein YP_005768073.1 COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation YP_005768074.1 COG2731 Beta-galactosidase, beta subunit YP_005768075.1 COG4731 Uncharacterized protein conserved in bacteria YP_005768076.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_005768077.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase YP_005768078.1 COG0789 Predicted transcriptional regulators YP_005768079.1 COG2214 DnaJ-class molecular chaperone YP_005768081.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005768083.1 COG0784 FOG: CheY-like receiver YP_005768084.1 COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase YP_005768085.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005768086.1 COG0833 Amino acid transporters YP_005768087.1 COG0558 Phosphatidylglycerophosphate synthase YP_005768089.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005768090.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005768091.1 COG0612 Predicted Zn-dependent peptidases YP_005768092.1 COG0167 Dihydroorotate dehydrogenase YP_005768093.1 COG0855 Polyphosphate kinase YP_005768095.1 COG0732 Restriction endonuclease S subunits YP_005768096.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005768097.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005768098.1 COG2604 Uncharacterized protein conserved in bacteria YP_005768101.1 COG2048 Heterodisulfide reductase, subunit B YP_005768103.1 COG1164 Oligoendopeptidase F YP_005768104.1 COG0475 Kef-type K+ transport systems, membrane components YP_005768107.1 COG0725 ABC-type molybdate transport system, periplasmic component YP_005768108.1 COG4149 ABC-type molybdate transport system, permease component YP_005768109.1 COG1118 ABC-type sulfate/molybdate transport systems, ATPase component YP_005768110.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005768112.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005768113.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005768114.1 COG1217 Predicted membrane GTPase involved in stress response YP_005768115.1 COG0338 Site-specific DNA methylase YP_005768117.1 COG0270 Site-specific DNA methylase YP_005768119.1 COG0753 Catalase YP_005768123.1 COG1432 Uncharacterized conserved protein YP_005768124.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_005768125.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005768126.1 COG0753 Catalase YP_005768129.1 COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism YP_005768130.1 COG2134 CDP-diacylglycerol pyrophosphatase YP_005768131.1 COG1749 Flagellar hook protein FlgE YP_005768132.1 COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) YP_005768134.1 COG0763 Lipid A disaccharide synthetase YP_005768135.1 COG0782 Transcription elongation factor YP_005768136.1 COG0756 dUTPase YP_005768139.1 COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor YP_005768140.1 COG2836 Uncharacterized conserved protein YP_005768141.1 COG0241 Histidinol phosphatase and related phosphatases YP_005768142.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005768143.1 COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase YP_005768144.1 COG0279 Phosphoheptose isomerase YP_005768145.1 COG0516 IMP dehydrogenase/GMP reductase YP_005768146.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005768147.1 COG2958 Uncharacterized protein conserved in bacteria YP_005768148.1 COG0671 Membrane-associated phospholipid phosphatase YP_005768150.1 COG0270 Site-specific DNA methylase YP_005768151.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005768152.1 COG0732 Restriction endonuclease S subunits YP_005768153.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005768154.1 COG2145 Hydroxyethylthiazole kinase, sugar kinase family YP_005768155.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_005768156.1 COG0352 Thiamine monophosphate synthase YP_005768157.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005768158.1 COG2089 Sialic acid synthase YP_005768159.1 COG0381 UDP-N-acetylglucosamine 2-epimerase YP_005768160.1 COG1083 CMP-N-acetylneuraminic acid synthetase YP_005768164.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_005768165.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_005768166.1 COG2067 Long-chain fatty acid transport protein YP_005768168.1 COG3018 Uncharacterized protein conserved in bacteria YP_005768170.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005768171.1 COG1160 Predicted GTPases YP_005768173.1 COG0421 Spermidine synthase YP_005768174.1 COG0237 Dephospho-CoA kinase YP_005768175.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005768176.1 COG0516 IMP dehydrogenase/GMP reductase YP_005768177.1 COG0356 F0F1-type ATP synthase, subunit a YP_005768179.1 COG0724 RNA-binding proteins (RRM domain) YP_005768180.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_005768181.1 COG0492 Thioredoxin reductase YP_005768182.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005768183.1 COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase YP_005768184.1 COG0460 Homoserine dehydrogenase YP_005768185.1 COG0322 Nuclease subunit of the excinuclease complex YP_005768188.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components YP_005768189.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_005768191.1 COG1360 Flagellar motor protein YP_005768192.1 COG1291 Flagellar motor component YP_005768193.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_005768194.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005768195.1 COG1565 Uncharacterized conserved protein YP_005768198.1 COG0742 N6-adenine-specific methylase YP_005768199.1 COG1580 Flagellar basal body-associated protein YP_005768200.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_005768202.1 COG1451 Predicted metal-dependent hydrolase YP_005768203.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_005768204.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_005768206.1 COG0807 GTP cyclohydrolase II YP_005768207.1 COG1977 Molybdopterin converting factor, small subunit YP_005768208.1 COG0314 Molybdopterin converting factor, large subunit YP_005768209.1 COG0521 Molybdopterin biosynthesis enzymes YP_005768210.1 COG0315 Molybdenum cofactor biosynthesis enzyme YP_005768213.1 COG2452 Predicted site-specific integrase-resolvase YP_005768214.1 COG0675 Transposase and inactivated derivatives YP_005768216.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_005768217.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005768218.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005768219.1 COG0606 Predicted ATPase with chaperone activity YP_005768220.1 COG2217 Cation transport ATPase YP_005768221.1 COG0732 Restriction endonuclease S subunits YP_005768223.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_005768224.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_005768225.1 COG2834 Outer membrane lipoprotein-sorting protein YP_005768230.1 COG1049 Aconitase B YP_005768231.1 COG1427 Predicted periplasmic solute-binding protein YP_005768232.1 COG0528 Uridylate kinase YP_005768233.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_005768234.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005768235.1 COG0162 Tyrosyl-tRNA synthetase YP_005768236.1 COG2070 Dioxygenases related to 2-nitropropane dioxygenase YP_005768237.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_005768239.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_005768240.1 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A YP_005768241.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_005768245.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_005768246.1 COG0552 Signal recognition particle GTPase YP_005768248.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_005768249.1 COG1418 Predicted HD superfamily hydrolase YP_005768250.1 COG0534 Na+-driven multidrug efflux pump YP_005768251.1 COG2056 Predicted permease YP_005768252.1 COG0388 Predicted amidohydrolase YP_005768254.1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 YP_005768256.1 COG1516 Flagellin-specific chaperone FliS YP_005768257.1 COG1345 Flagellar capping protein YP_005768258.1 COG1334 Uncharacterized flagellar protein FlaG YP_005768259.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005768260.1 COG2177 Cell division protein YP_005768261.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005768262.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_005768263.1 COG3979 Uncharacterized protein contain chitin-binding domain type 3 YP_005768264.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005768265.1 COG3596 Predicted GTPase YP_005768266.1 COG3597 Uncharacterized protein/domain associated with GTPases YP_005768267.1 COG0772 Bacterial cell division membrane protein YP_005768268.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_005768269.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005768270.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_005768271.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005768272.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_005768273.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_005768274.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_005768275.1 COG2236 Predicted phosphoribosyltransferases YP_005768276.1 COG0621 2-methylthioadenine synthetase YP_005768279.1 COG0621 2-methylthioadenine synthetase YP_005768281.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005768282.1 COG0042 tRNA-dihydrouridine synthase YP_005768285.1 COG2704 Anaerobic C4-dicarboxylate transporter YP_005768286.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_005768290.1 COG1279 Lysine efflux permease YP_005768291.1 COG2812 DNA polymerase III, gamma/tau subunits YP_005768292.1 COG0802 Predicted ATPase or kinase YP_005768293.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_005768294.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_005768295.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005768296.1 COG1896 Predicted hydrolases of HD superfamily YP_005768298.1 COG1912 Uncharacterized conserved protein YP_005768300.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_005768302.1 COG0178 Excinuclease ATPase subunit YP_005768305.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_005768307.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005768308.1 COG0818 Diacylglycerol kinase YP_005768310.1 COG4647 Acetone carboxylase, gamma subunit YP_005768311.1 COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit YP_005768312.1 COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit YP_005768313.1 COG3528 Uncharacterized protein conserved in bacteria YP_005768314.1 COG2031 Short chain fatty acids transporter YP_005768315.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_005768316.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_005768317.1 COG0183 Acetyl-CoA acetyltransferase YP_005768318.1 COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB YP_005768319.1 COG0370 Fe2+ transport system protein B YP_005768320.1 COG4772 Outer membrane receptor for Fe3+-dicitrate YP_005768321.1 COG1338 Flagellar biosynthesis pathway, component FliP YP_005768323.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_005768326.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005768327.1 COG0673 Predicted dehydrogenases and related proteins YP_005768328.1 COG0730 Predicted permeases YP_005768329.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005768330.1 COG0582 Integrase YP_005768332.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005768335.1 COG4889 Predicted helicase YP_005768336.1 COG0247 Fe-S oxidoreductase YP_005768337.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005768339.1 COG0082 Chorismate synthase YP_005768340.1 COG0571 dsRNA-specific ribonuclease YP_005768341.1 COG0328 Ribonuclease HI YP_005768342.1 COG2956 Predicted N-acetylglucosaminyl transferase YP_005768343.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005768344.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_005768346.1 COG0612 Predicted Zn-dependent peptidases YP_005768347.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_005768348.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_005768349.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_005768350.1 COG1528 Ferritin-like protein YP_005768351.1 COG0560 Phosphoserine phosphatase YP_005768354.1 COG1573 Uracil-DNA glycosylase YP_005768355.1 COG1027 Aspartate ammonia-lyase YP_005768356.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_005768358.1 COG1210 UDP-glucose pyrophosphorylase YP_005768359.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005768360.1 COG0762 Predicted integral membrane protein YP_005768361.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005768362.1 COG0778 Nitroreductase YP_005768364.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005768365.1 COG0603 Predicted PP-loop superfamily ATPase YP_005768370.1 COG0680 Ni,Fe-hydrogenase maturation factor YP_005768371.1 COG1969 Ni,Fe-hydrogenase I cytochrome b subunit YP_005768372.1 COG0374 Ni,Fe-hydrogenase I large subunit YP_005768373.1 COG1740 Ni,Fe-hydrogenase I small subunit YP_005768374.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_005768375.1 COG1479 Uncharacterized conserved protein YP_005768377.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005768378.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_005768379.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis YP_005768380.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005768381.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_005768383.1 COG1193 Mismatch repair ATPase (MutS family) YP_005768384.1 COG0221 Inorganic pyrophosphatase YP_005768385.1 COG1196 Chromosome segregation ATPases YP_005768386.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_005768387.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_005768388.1 COG0563 Adenylate kinase and related kinases YP_005768389.1 COG0173 Aspartyl-tRNA synthetase YP_005768390.1 COG0835 Chemotaxis signal transduction protein YP_005768391.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_005768393.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005768394.1 COG0842 ABC-type multidrug transport system, permease component YP_005768396.1 COG0015 Adenylosuccinate lyase YP_005768397.1 COG0841 Cation/multidrug efflux pump YP_005768398.1 COG0845 Membrane-fusion protein YP_005768399.1 COG1538 Outer membrane protein YP_005768400.1 COG0407 Uroporphyrinogen-III decarboxylase YP_005768402.1 COG2231 Uncharacterized protein related to Endonuclease III YP_005768403.1 COG1344 Flagellin and related hook-associated proteins YP_005768404.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005768405.1 COG0840 Methyl-accepting chemotaxis protein YP_005768406.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_005768407.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_005768408.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005768410.1 COG1495 Disulfide bond formation protein DsbB YP_005768412.1 COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit YP_005768413.1 COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit YP_005768414.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit YP_005768415.1 COG1146 Ferredoxin YP_005768417.1 COG1559 Predicted periplasmic solute-binding protein YP_005768419.1 COG1918 Fe2+ transport system protein A YP_005768420.1 COG0177 Predicted EndoIII-related endonuclease YP_005768421.1 COG1886 Flagellar motor switch/type III secretory pathway protein YP_005768423.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_005768424.1 COG0418 Dihydroorotase YP_005768425.1 COG4692 Predicted neuraminidase (sialidase) YP_005768427.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_005768428.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_005768429.1 COG0681 Signal peptidase I YP_005768430.1 COG1994 Zn-dependent proteases YP_005768431.1 COG0698 Ribose 5-phosphate isomerase RpiB YP_005768433.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_005768434.1 COG0586 Uncharacterized membrane-associated protein YP_005768435.1 COG0260 Leucyl aminopeptidase YP_005768436.1 COG0012 Predicted GTPase, probable translation factor YP_005768438.1 COG0628 Predicted permease YP_005768439.1 COG0253 Diaminopimelate epimerase YP_005768440.1 COG3059 Predicted membrane protein YP_005768443.1 COG0828 Ribosomal protein S21 YP_005768444.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005768445.1 COG0236 Acyl carrier protein YP_005768447.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005768448.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_005768450.1 COG1217 Predicted membrane GTPase involved in stress response YP_005768452.1 COG0566 rRNA methylases YP_005768453.1 COG0313 Predicted methyltransferases YP_005768454.1 COG0254 Ribosomal protein L31 YP_005768455.1 COG1158 Transcription termination factor YP_005768456.1 COG0796 Glutamate racemase YP_005768469.1 COG3736 Type IV secretory pathway, component VirB8 YP_005768471.1 COG3504 Type IV secretory pathway, VirB9 components YP_005768472.1 COG2948 Type IV secretory pathway, VirB10 components YP_005768475.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005768476.1 COG3505 Type IV secretory pathway, VirD4 components YP_005768480.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005768481.1 COG3034 Uncharacterized protein conserved in bacteria YP_005768482.1 COG1159 GTPase YP_005768483.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_005768484.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_005768485.1 COG0359 Ribosomal protein L9 YP_005768486.1 COG1479 Uncharacterized conserved protein YP_005768487.1 COG0174 Glutamine synthetase YP_005768489.1 COG0289 Dihydrodipicolinate reductase YP_005768490.1 COG0277 FAD/FMN-containing dehydrogenases YP_005768492.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005768493.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005768495.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005768496.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_005768497.1 COG2829 Outer membrane phospholipase A YP_005768498.1 COG0733 Na+-dependent transporters of the SNF family YP_005768499.1 COG0733 Na+-dependent transporters of the SNF family YP_005768500.1 COG0824 Predicted thioesterase YP_005768502.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_005768503.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005768506.1 COG0227 Ribosomal protein L28 YP_005768507.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_005768508.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005768511.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_005768513.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_005768514.1 COG0215 Cysteinyl-tRNA synthetase YP_005768516.1 COG0675 Transposase and inactivated derivatives YP_005768517.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_005768518.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005768519.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005768520.1 COG1607 Acyl-CoA hydrolase YP_005768521.1 COG3041 Uncharacterized protein conserved in bacteria YP_005768525.1 COG0409 Hydrogenase maturation factor YP_005768526.1 COG0298 Hydrogenase maturation factor YP_005768527.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_005768528.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_005768529.1 COG0282 Acetate kinase YP_005768530.1 COG0280 Phosphotransacetylase YP_005768532.1 COG1843 Flagellar hook capping protein YP_005768533.1 COG1749 Flagellar hook protein FlgE YP_005768535.1 COG0827 Adenine-specific DNA methylase YP_005768536.1 COG0210 Superfamily I DNA and RNA helicases YP_005768540.1 COG1190 Lysyl-tRNA synthetase (class II) YP_005768541.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005768543.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_005768544.1 COG0670 Integral membrane protein, interacts with FtsH YP_005768545.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005768548.1 COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog YP_005768549.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_005768550.1 COG0585 Uncharacterized conserved protein YP_005768551.1 COG0501 Zn-dependent protease with chaperone function YP_005768552.1 COG0302 GTP cyclohydrolase I YP_005768553.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005768554.1 COG0496 Predicted acid phosphatase YP_005768556.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_005768557.1 COG0602 Organic radical activating enzymes YP_005768558.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005768560.1 COG0477 Permeases of the major facilitator superfamily YP_005768561.1 COG0765 ABC-type amino acid transport system, permease component YP_005768562.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005768563.1 COG0787 Alanine racemase YP_005768564.1 COG1115 Na+/alanine symporter YP_005768565.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_005768566.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_005768568.1 COG1757 Na+/H+ antiporter YP_005768572.1 COG1576 Uncharacterized conserved protein YP_005768573.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_005768574.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_005768575.1 COG1546 Uncharacterized protein (competence- and mitomycin-induced) YP_005768577.1 COG0778 Nitroreductase YP_005768578.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_005768579.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005768580.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_005768581.1 COG1579 Zn-ribbon protein, possibly nucleic acid-binding YP_005768582.1 COG0327 Uncharacterized conserved protein YP_005768583.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_005768584.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_005768586.1 COG0699 Predicted GTPases (dynamin-related) YP_005768587.1 COG0699 Predicted GTPases (dynamin-related) YP_005768589.1 COG3309 Uncharacterized virulence-associated protein D YP_005768591.1 COG0845 Membrane-fusion protein YP_005768593.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_005768595.1 COG0696 Phosphoglyceromutase YP_005768596.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_005768597.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005768598.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005768599.1 COG0849 Actin-like ATPase involved in cell division YP_005768600.1 COG0206 Cell division GTPase YP_005768601.1 COG0668 Small-conductance mechanosensitive channel YP_005768603.1 COG1570 Exonuclease VII, large subunit YP_005768608.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005768609.1 COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain YP_005768611.1 COG0608 Single-stranded DNA-specific exonuclease YP_005768612.1 COG1166 Arginine decarboxylase (spermidine biosynthesis) YP_005768613.1 COG0438 Glycosyltransferase YP_005768614.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_005768615.1 COG0500 SAM-dependent methyltransferases YP_005768617.1 COG0143 Methionyl-tRNA synthetase YP_005768618.1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases YP_005768619.1 COG0668 Small-conductance mechanosensitive channel YP_005768622.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_005768624.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_005768626.1 COG0520 Selenocysteine lyase YP_005768627.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005768628.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_005768629.1 COG0073 EMAP domain YP_005768630.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_005768631.1 COG0761 Penicillin tolerance protein YP_005768632.1 COG0539 Ribosomal protein S1 YP_005768634.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_005768635.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_005768636.1 COG0325 Predicted enzyme with a TIM-barrel fold YP_005768637.1 COG2908 Uncharacterized protein conserved in bacteria YP_005768638.1 COG0835 Chemotaxis signal transduction protein YP_005768639.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_005768640.1 COG0835 Chemotaxis signal transduction protein YP_005768642.1 COG2077 Peroxiredoxin YP_005768643.1 COG0605 Superoxide dismutase YP_005768644.1 COG0500 SAM-dependent methyltransferases YP_005768645.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_005768647.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005768651.1 COG0501 Zn-dependent protease with chaperone function YP_005768652.1 COG2890 Methylase of polypeptide chain release factors YP_005768653.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_005768655.1 COG1333 ResB protein required for cytochrome c biosynthesis YP_005768656.1 COG2143 Thioredoxin-related protein YP_005768657.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_005768659.1 COG1385 Uncharacterized protein conserved in bacteria YP_005768661.1 COG0717 Deoxycytidine deaminase YP_005768662.1 COG0511 Biotin carboxyl carrier protein YP_005768663.1 COG0439 Biotin carboxylase YP_005768667.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_005768668.1 COG0208 Ribonucleotide reductase, beta subunit YP_005768669.1 COG2518 Protein-L-isoaspartate carboxylmethyltransferase YP_005768670.1 COG0795 Predicted permeases YP_005768671.1 COG0101 Pseudouridylate synthase YP_005768672.1 COG1087 UDP-glucose 4-epimerase YP_005768674.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_005768675.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005768676.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_005768677.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_005768678.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_005768679.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_005768680.1 COG0837 Glucokinase YP_005768681.1 COG1064 Zn-dependent alcohol dehydrogenases YP_005768682.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005768683.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005768687.1 COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit YP_005768688.1 COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit YP_005768689.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit YP_005768690.1 COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit YP_005768691.1 COG0015 Adenylosuccinate lyase YP_005768693.1 COG0556 Helicase subunit of the DNA excision repair complex YP_005768694.1 COG0308 Aminopeptidase N YP_005768696.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005768697.1 COG0405 Gamma-glutamyltransferase YP_005768698.1 COG1256 Flagellar hook-associated protein YP_005768700.1 COG0270 Site-specific DNA methylase YP_005768704.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_005768706.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_005768707.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_005768709.1 COG0848 Biopolymer transport protein YP_005768710.1 COG0811 Biopolymer transport proteins YP_005768711.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_005768712.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005768713.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_005768714.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_005768717.1 COG0711 F0F1-type ATP synthase, subunit b YP_005768718.1 COG1475 Predicted transcriptional regulators YP_005768719.1 COG1192 ATPases involved in chromosome partitioning YP_005768720.1 COG0340 Biotin-(acetyl-CoA carboxylase) ligase YP_005768721.1 COG0223 Methionyl-tRNA formyltransferase YP_005768722.1 COG4487 Uncharacterized protein conserved in bacteria YP_005768725.1 COG0335 Ribosomal protein L19 YP_005768726.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_005768727.1 COG0806 RimM protein, required for 16S rRNA processing YP_005768728.1 COG1837 Predicted RNA-binding protein (contains KH domain) YP_005768729.1 COG0228 Ribosomal protein S16 YP_005768730.1 COG0541 Signal recognition particle GTPase YP_005768731.1 COG0525 Valyl-tRNA synthetase YP_005768732.1 COG1699 Uncharacterized protein conserved in bacteria YP_005768733.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005768736.1 COG0345 Pyrroline-5-carboxylate reductase YP_005768737.1 COG0319 Predicted metal-dependent hydrolase YP_005768738.1 COG0716 Flavodoxins YP_005768739.1 COG0586 Uncharacterized membrane-associated protein YP_005768740.1 COG3197 Uncharacterized protein, possibly involved in nitrogen fixation YP_005768741.1 COG0492 Thioredoxin reductase YP_005768742.1 COG0477 Permeases of the major facilitator superfamily YP_005768743.1 COG0166 Glucose-6-phosphate isomerase YP_005768746.1 COG1966 Carbon starvation protein, predicted membrane protein YP_005768747.1 COG0765 ABC-type amino acid transport system, permease component YP_005768748.1 COG0765 ABC-type amino acid transport system, permease component YP_005768749.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005768750.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005768753.1 COG0738 Fucose permease YP_005768754.1 COG2252 Permeases YP_005768756.1 COG0813 Purine-nucleoside phosphorylase YP_005768757.1 COG1015 Phosphopentomutase YP_005768758.1 COG1972 Nucleoside permease YP_005768759.1 COG0477 Permeases of the major facilitator superfamily YP_005768760.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005768761.1 COG0475 Kef-type K+ transport systems, membrane components YP_005768762.1 COG0534 Na+-driven multidrug efflux pump YP_005768763.1 COG2814 Arabinose efflux permease YP_005768764.1 COG3338 Carbonic anhydrase YP_005768765.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005768766.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_005768767.1 COG0124 Histidyl-tRNA synthetase YP_005768768.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005768770.1 COG0480 Translation elongation factors (GTPases) YP_005768771.1 COG0049 Ribosomal protein S7 YP_005768772.1 COG0048 Ribosomal protein S12 YP_005768773.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005768775.1 COG0222 Ribosomal protein L7/L12 YP_005768776.1 COG0244 Ribosomal protein L10 YP_005768777.1 COG0081 Ribosomal protein L1 YP_005768778.1 COG0080 Ribosomal protein L11 YP_005768779.1 COG0250 Transcription antiterminator YP_005768780.1 COG0690 Preprotein translocase subunit SecE YP_005768781.1 COG0267 Ribosomal protein L33 YP_005768782.1 COG0050 GTPases - translation elongation factors YP_005768783.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005768784.1 COG0546 Predicted phosphatases YP_005768785.1 COG3392 Adenine-specific DNA methylase YP_005768787.1 COG1045 Serine acetyltransferase YP_005768788.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_005768789.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_005768790.1 COG1926 Predicted phosphoribosyltransferases YP_005768791.1 COG1452 Organic solvent tolerance protein OstA YP_005768793.1 COG0151 Phosphoribosylamine-glycine ligase YP_005768794.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005768795.1 COG0020 Undecaprenyl pyrophosphate synthase YP_005768796.1 COG0277 FAD/FMN-containing dehydrogenases YP_005768797.1 COG0607 Rhodanese-related sulfurtransferase YP_005768798.1 COG1587 Uroporphyrinogen-III synthase YP_005768799.1 COG0239 Integral membrane protein possibly involved in chromosome condensation YP_005768800.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005768801.1 COG2863 Cytochrome c553 YP_005768802.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005768803.1 COG0527 Aspartokinases YP_005768805.1 COG0470 ATPase involved in DNA replication YP_005768806.1 COG0294 Dihydropteroate synthase and related enzymes YP_005768808.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005768811.1 COG2952 Uncharacterized protein conserved in bacteria YP_005768812.1 COG0505 Carbamoylphosphate synthase small subunit YP_005768813.1 COG0388 Predicted amidohydrolase YP_005768815.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_005768816.1 COG0013 Alanyl-tRNA synthetase YP_005768817.1 COG2841 Uncharacterized protein conserved in bacteria YP_005768819.1 COG0238 Ribosomal protein S18 YP_005768820.1 COG0629 Single-stranded DNA-binding protein YP_005768821.1 COG0360 Ribosomal protein S6 YP_005768823.1 COG0557 Exoribonuclease R YP_005768824.1 COG0169 Shikimate 5-dehydrogenase YP_005768826.1 COG4174 ABC-type uncharacterized transport system, permease component YP_005768827.1 COG0180 Tryptophanyl-tRNA synthetase YP_005768828.1 COG0500 SAM-dependent methyltransferases YP_005768829.1 COG1314 Preprotein translocase subunit SecG YP_005768830.1 COG0233 Ribosome recycling factor YP_005768831.1 COG0461 Orotate phosphoribosyltransferase YP_005768832.1 COG1714 Predicted membrane protein/domain YP_005768833.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_005768834.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases YP_005768835.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_005768836.1 COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 YP_005768839.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_005768840.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_005768841.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_005768842.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_005768843.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) YP_005768844.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_005768845.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_005768846.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_005768847.1 COG1729 Uncharacterized protein conserved in bacteria YP_005768848.1 COG1109 Phosphomannomutase YP_005768850.1 COG0159 Tryptophan synthase alpha chain YP_005768851.1 COG0133 Tryptophan synthase beta chain YP_005768852.1 COG0134 Indole-3-glycerol phosphate synthase YP_005768853.1 COG0547 Anthranilate phosphoribosyltransferase YP_005768854.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_005768855.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005768856.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005768857.1 COG2503 Predicted secreted acid phosphatase YP_005768858.1 COG2353 Uncharacterized conserved protein YP_005768859.1 COG0819 Putative transcription activator YP_005768860.1 COG3201 Nicotinamide mononucleotide transporter YP_005768861.1 COG1564 Thiamine pyrophosphokinase YP_005768864.1 COG0203 Ribosomal protein L17 YP_005768865.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_005768866.1 COG0522 Ribosomal protein S4 and related proteins YP_005768867.1 COG0100 Ribosomal protein S11 YP_005768868.1 COG0099 Ribosomal protein S13 YP_005768869.1 COG0257 Ribosomal protein L36 YP_005768870.1 COG0361 Translation initiation factor 1 (IF-1) YP_005768871.1 COG0024 Methionine aminopeptidase YP_005768872.1 COG0201 Preprotein translocase subunit SecY YP_005768873.1 COG0200 Ribosomal protein L15 YP_005768874.1 COG0098 Ribosomal protein S5 YP_005768875.1 COG0256 Ribosomal protein L18 YP_005768876.1 COG0097 Ribosomal protein L6P/L9E YP_005768877.1 COG0096 Ribosomal protein S8 YP_005768878.1 COG0199 Ribosomal protein S14 YP_005768879.1 COG0094 Ribosomal protein L5 YP_005768880.1 COG0198 Ribosomal protein L24 YP_005768881.1 COG0093 Ribosomal protein L14 YP_005768882.1 COG0186 Ribosomal protein S17 YP_005768883.1 COG0255 Ribosomal protein L29 YP_005768884.1 COG0197 Ribosomal protein L16/L10E YP_005768885.1 COG0092 Ribosomal protein S3 YP_005768886.1 COG0091 Ribosomal protein L22 YP_005768887.1 COG0185 Ribosomal protein S19 YP_005768888.1 COG0090 Ribosomal protein L2 YP_005768889.1 COG0089 Ribosomal protein L23 YP_005768890.1 COG0088 Ribosomal protein L4 YP_005768891.1 COG0087 Ribosomal protein L3 YP_005768892.1 COG0051 Ribosomal protein S10 YP_005768893.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005768895.1 COG0164 Ribonuclease HII YP_005768897.1 COG0114 Fumarase YP_005768900.1 COG0845 Membrane-fusion protein YP_005768901.1 COG3696 Putative silver efflux pump YP_005768902.1 COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance) YP_005768903.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) YP_005768904.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005768906.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005768907.1 COG2214 DnaJ-class molecular chaperone YP_005768908.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_005768909.1 COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain YP_005768910.1 COG0811 Biopolymer transport proteins YP_005768911.1 COG0848 Biopolymer transport protein YP_005768912.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_005768913.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005768914.1 COG0598 Mg2+ and Co2+ transporters YP_005768915.1 COG0126 3-phosphoglycerate kinase YP_005768916.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005768917.1 COG0692 Uracil DNA glycosylase YP_005768918.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005768920.1 COG0793 Periplasmic protease YP_005768923.1 COG0863 DNA modification methylase YP_005768924.1 COG4889 Predicted helicase YP_005768925.1 COG0157 Nicotinate-nucleotide pyrophosphorylase YP_005768926.1 COG0379 Quinolinate synthase YP_005768927.1 COG0688 Phosphatidylserine decarboxylase YP_005768929.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005768930.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_005768931.1 COG0658 Predicted membrane metal-binding protein YP_005768932.1 COG0305 Replicative DNA helicase YP_005768933.1 COG0062 Uncharacterized conserved protein YP_005768934.1 COG0642 Signal transduction histidine kinase YP_005768935.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005768938.1 COG0338 Site-specific DNA methylase YP_005768939.1 COG2189 Adenine specific DNA methylase Mod YP_005768940.1 COG2189 Adenine specific DNA methylase Mod YP_005768941.1 COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005768942.1 COG1792 Cell shape-determining protein YP_005768943.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_005768944.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_005768945.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_005768946.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005768947.1 COG1699 Uncharacterized protein conserved in bacteria YP_005768949.1 COG4105 DNA uptake lipoprotein YP_005768950.1 COG0466 ATP-dependent Lon protease, bacterial type YP_005768951.1 COG0287 Prephenate dehydrogenase YP_005768952.1 COG1864 DNA/RNA endonuclease G, NUC1 YP_005768953.1 COG2189 Adenine specific DNA methylase Mod YP_005768954.1 COG3421 Uncharacterized protein conserved in bacteria YP_005768956.1 COG0502 Biotin synthase and related enzymes YP_005768957.1 COG1295 Predicted membrane protein YP_005768960.1 COG1479 Uncharacterized conserved protein YP_005768963.1 COG0780 Enzyme related to GTP cyclohydrolase I YP_005768964.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_005768965.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005768966.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005768967.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_005768968.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_005768969.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_005768970.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005768971.1 COG0060 Isoleucyl-tRNA synthetase YP_005768972.1 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) YP_005768975.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_005768976.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_005768977.1 COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain YP_005768978.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_005768981.1 COG0732 Restriction endonuclease S subunits YP_005768982.1 COG0788 Formyltetrahydrofolate hydrolase YP_005768983.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005768986.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005768989.1 COG3676 Transposase and inactivated derivatives YP_005768993.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_005768994.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_005768995.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase YP_005768996.1 COG0691 tmRNA-binding protein YP_005768997.1 COG0811 Biopolymer transport proteins YP_005768998.1 COG0848 Biopolymer transport protein YP_005768999.1 COG0230 Ribosomal protein L34 YP_005769000.1 COG0594 RNase P protein component YP_005769001.1 COG0759 Uncharacterized conserved protein YP_005769002.1 COG0706 Preprotein translocase subunit YidC YP_005769003.1 COG1315 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain YP_005769004.1 COG0486 Predicted GTPase YP_005769009.1 COG0481 Membrane GTPase LepA YP_005769012.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005769013.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005769014.1 COG0587 DNA polymerase III, alpha subunit YP_005769015.1 COG1858 Cytochrome c peroxidase YP_005769016.1 COG3187 Heat shock protein YP_005769018.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_005769019.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_005769020.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_005769022.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005769024.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005769026.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005769028.1 COG0125 Thymidylate kinase YP_005769029.1 COG0669 Phosphopantetheine adenylyltransferase YP_005769030.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_005769032.1 COG1261 Flagellar basal body P-ring biosynthesis protein YP_005769033.1 COG0210 Superfamily I DNA and RNA helicases YP_005769034.1 COG0457 FOG: TPR repeat YP_005769035.1 COG0172 Seryl-tRNA synthetase YP_005769036.1 COG0388 Predicted amidohydrolase YP_005769037.1 COG1722 Exonuclease VII small subunit YP_005769038.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_005769039.1 COG1981 Predicted membrane protein YP_005769040.1 COG1739 Uncharacterized conserved protein YP_005769041.1 COG0842 ABC-type multidrug transport system, permease component YP_005769042.1 COG0842 ABC-type multidrug transport system, permease component YP_005769043.1 COG0845 Membrane-fusion protein YP_005769044.1 COG1538 Outer membrane protein YP_005769045.1 COG1253 Hemolysins and related proteins containing CBS domains YP_005769046.1 COG0306 Phosphate/sulphate permeases YP_005769047.1 COG0694 Thioredoxin-like proteins and domains YP_005769049.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_005769050.1 COG0176 Transaldolase YP_005769051.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_005769052.1 COG0193 Peptidyl-tRNA hydrolase YP_005769053.1 COG0795 Predicted permeases YP_005769054.1 COG3392 Adenine-specific DNA methylase YP_005769055.1 COG0338 Site-specific DNA methylase YP_005769056.1 COG0051 Ribosomal protein S10 YP_005769059.1 COG3399 Uncharacterized protein conserved in bacteria YP_005769060.1 COG2217 Cation transport ATPase YP_005769061.1 COG4123 Predicted O-methyltransferase YP_005769062.1 COG0117 Pyrimidine deaminase YP_005769063.1 COG0786 Na+/glutamate symporter YP_005769064.1 COG1748 Saccharopine dehydrogenase and related proteins YP_005769065.1 COG0348 Polyferredoxin YP_005769066.1 COG0344 Predicted membrane protein YP_005769067.1 COG1539 Dihydroneopterin aldolase YP_005769069.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005769070.1 COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] YP_005769071.1 COG0195 Transcription elongation factor YP_005769072.1 COG1002 Type II restriction enzyme, methylase subunits YP_005769073.1 COG3587 Restriction endonuclease YP_005769074.1 COG2189 Adenine specific DNA methylase Mod YP_005769075.1 COG1200 RecG-like helicase YP_005769078.1 COG0708 Exonuclease III YP_005769080.1 COG0593 ATPase involved in DNA replication initiation YP_005769081.1 COG0813 Purine-nucleoside phosphorylase YP_005769082.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005769083.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_005769084.1 COG1351 Predicted alternative thymidylate synthase YP_005769085.1 COG0732 Restriction endonuclease S subunits YP_005769087.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005769088.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005769089.1 COG1451 Predicted metal-dependent hydrolase YP_005769090.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005769092.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_005769093.1 COG0686 Alanine dehydrogenase YP_005769095.1 COG0061 Predicted sugar kinase YP_005769096.1 COG0497 ATPase involved in DNA repair YP_005769097.1 COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP YP_005769102.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005769103.1 COG0036 Pentose-5-phosphate-3-epimerase YP_005769104.1 COG0158 Fructose-1,6-bisphosphatase YP_005769106.1 COG0827 Adenine-specific DNA methylase YP_005769109.1 COG3041 Uncharacterized protein conserved in bacteria YP_005769114.1 COG0264 Translation elongation factor Ts YP_005769115.1 COG0052 Ribosomal protein S2 YP_005769116.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_005769117.1 COG3004 Na+/H+ antiporter YP_005769118.1 COG1862 Preprotein translocase subunit YajC YP_005769119.1 COG0342 Preprotein translocase subunit SecD YP_005769120.1 COG0341 Preprotein translocase subunit SecF YP_005769122.1 COG0495 Leucyl-tRNA synthetase YP_005769124.1 COG0285 Folylpolyglutamate synthase YP_005769125.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005769126.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005769127.1 COG1664 Integral membrane protein CcmA involved in cell shape determination YP_005769128.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_005769129.1 COG0723 Rieske Fe-S protein YP_005769130.1 COG1290 Cytochrome b subunit of the bc complex YP_005769131.1 COG2857 Cytochrome c1 YP_005769133.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005769134.1 COG1677 Flagellar hook-basal body protein YP_005769135.1 COG1558 Flagellar basal body rod protein YP_005769136.1 COG1815 Flagellar basal body protein YP_005769137.1 COG0772 Bacterial cell division membrane protein YP_005769138.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005769139.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005769140.1 COG0450 Peroxiredoxin YP_005769141.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_005769142.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005769144.1 COG0218 Predicted GTPase YP_005769145.1 COG1934 Uncharacterized protein conserved in bacteria YP_005769147.1 COG1778 Low specificity phosphatase (HAD superfamily) YP_005769148.1 COG0797 Lipoproteins YP_005769149.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005769150.1 COG0084 Mg-dependent DNase YP_005769151.1 COG0307 Riboflavin synthase alpha chain YP_005769152.1 COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB YP_005769153.1 COG1135 ABC-type metal ion transport system, ATPase component YP_005769154.1 COG2011 ABC-type metal ion transport system, permease component YP_005769156.1 COG0671 Membrane-associated phospholipid phosphatase YP_005769157.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005769158.1 COG0854 Pyridoxal phosphate biosynthesis protein YP_005769159.1 COG1995 Pyridoxal phosphate biosynthesis protein YP_005769161.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_005769163.1 COG4786 Flagellar basal body rod protein YP_005769164.1 COG4735 Uncharacterized protein conserved in bacteria YP_005769167.1 COG4735 Uncharacterized protein conserved in bacteria