-- dump date 20140619_114345 -- class Genbank::CDS -- table cds_note -- id note YP_005770638.1 COG0781 Transcription termination factor YP_005770639.1 COG0054 Riboflavin synthase beta-chain YP_005770640.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_005770641.1 COG0288 Carbonic anhydrase YP_005770642.1 COG0284 Orotidine-5'-phosphate decarboxylase YP_005770643.1 COG0414 Panthothenate synthetase YP_005770646.1 COG0459 Chaperonin GroEL (HSP60 family) YP_005770647.1 COG0234 Co-chaperonin GroES (HSP10) YP_005770648.1 COG0358 DNA primase (bacterial type) YP_005770649.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005770653.1 COG3451 Type IV secretory pathway, VirB4 components YP_005770654.1 COG3014 Uncharacterized protein conserved in bacteria YP_005770655.1 COG0835 Chemotaxis signal transduction protein YP_005770656.1 COG0019 Diaminopimelate decarboxylase YP_005770657.1 COG0671 Membrane-associated phospholipid phosphatase YP_005770658.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_005770661.1 COG0372 Citrate synthase YP_005770662.1 COG0538 Isocitrate dehydrogenases YP_005770664.1 COG0132 Dethiobiotin synthetase YP_005770665.1 COG0515 Serine/threonine protein kinase YP_005770666.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_005770667.1 COG2127 Uncharacterized conserved protein YP_005770668.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005770669.1 COG0853 Aspartate 1-decarboxylase YP_005770670.1 COG0718 Uncharacterized protein conserved in bacteria YP_005770671.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005770674.1 COG3736 Type IV secretory pathway, component VirB8 YP_005770675.1 COG3504 Type IV secretory pathway, VirB9 components YP_005770676.1 COG2948 Type IV secretory pathway, VirB10 components YP_005770677.1 COG0836 Mannose-1-phosphate guanylyltransferase YP_005770678.1 COG1089 GDP-D-mannose dehydratase YP_005770679.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005770683.1 COG0309 Hydrogenase maturation factor YP_005770684.1 COG0068 Hydrogenase maturation factor YP_005770685.1 COG2957 Peptidylarginine deiminase and related enzymes YP_005770686.1 COG0863 DNA modification methylase YP_005770687.1 COG0270 Site-specific DNA methylase YP_005770688.1 COG1403 Restriction endonuclease YP_005770689.1 COG0591 Na+/proline symporter YP_005770690.1 COG0506 Proline dehydrogenase YP_005770693.1 COG1511 Predicted membrane protein YP_005770699.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005770701.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005770702.1 COG0829 Urease accessory protein UreH YP_005770703.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_005770704.1 COG0830 Urease accessory protein UreF YP_005770705.1 COG2371 Urease accessory protein UreE YP_005770706.1 COG1138 Cytochrome c biogenesis factor YP_005770707.1 COG0804 Urea amidohydrolase (urease) alpha subunit YP_005770708.1 COG0831 Urea amidohydrolase (urease) gamma subunit YP_005770709.1 COG0597 Lipoprotein signal peptidase YP_005770710.1 COG1109 Phosphomannomutase YP_005770711.1 COG0268 Ribosomal protein S20 YP_005770712.1 COG0216 Protein chain release factor A YP_005770716.1 COG0840 Methyl-accepting chemotaxis protein YP_005770717.1 COG0103 Ribosomal protein S9 YP_005770718.1 COG0102 Ribosomal protein L13 YP_005770720.1 COG0579 Predicted dehydrogenase YP_005770721.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_005770722.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005770724.1 COG0775 Nucleoside phosphorylase YP_005770725.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005770727.1 COG0863 DNA modification methylase YP_005770730.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_005770733.1 COG0498 Threonine synthase YP_005770734.1 COG0840 Methyl-accepting chemotaxis protein YP_005770735.1 COG1636 Uncharacterized protein conserved in bacteria YP_005770737.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005770738.1 COG0840 Methyl-accepting chemotaxis protein YP_005770739.1 COG1854 LuxS protein involved in autoinducer AI2 synthesis YP_005770740.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_005770741.1 COG0031 Cysteine synthase YP_005770742.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_005770743.1 COG0443 Molecular chaperone YP_005770744.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_005770745.1 COG1420 Transcriptional regulator of heat shock gene YP_005770746.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_005770748.1 COG2604 Uncharacterized protein conserved in bacteria YP_005770749.1 COG1344 Flagellin and related hook-associated proteins YP_005770750.1 COG0550 Topoisomerase IA YP_005770751.1 COG0731 Fe-S oxidoreductases YP_005770753.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_005770755.1 COG0441 Threonyl-tRNA synthetase YP_005770756.1 COG0290 Translation initiation factor 3 (IF-3) YP_005770757.1 COG0291 Ribosomal protein L35 YP_005770758.1 COG0292 Ribosomal protein L20 YP_005770764.1 COG1760 L-serine deaminase YP_005770765.1 COG0814 Amino acid permeases YP_005770766.1 COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_005770768.1 COG1225 Peroxiredoxin YP_005770769.1 COG1556 Uncharacterized conserved protein YP_005770770.1 COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain YP_005770771.1 COG0247 Fe-S oxidoreductase YP_005770772.1 COG1620 L-lactate permease YP_005770773.1 COG1620 L-lactate permease YP_005770774.1 COG1194 A/G-specific DNA glycosylase YP_005770775.1 COG0471 Di- and tricarboxylate transporters YP_005770776.1 COG3278 Cbb3-type cytochrome oxidase, subunit 1 YP_005770777.1 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit YP_005770779.1 COG2010 Cytochrome c, mono- and diheme variants YP_005770782.1 COG0443 Molecular chaperone YP_005770785.1 COG2107 Predicted periplasmic solute-binding protein YP_005770786.1 COG0468 RecA/RadA recombinase YP_005770787.1 COG0148 Enolase YP_005770790.1 COG0703 Shikimate kinase YP_005770791.1 COG0840 Methyl-accepting chemotaxis protein YP_005770792.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005770793.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005770796.1 COG0217 Uncharacterized conserved protein YP_005770797.1 COG0113 Delta-aminolevulinic acid dehydratase YP_005770798.1 COG0642 Signal transduction histidine kinase YP_005770799.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005770801.1 COG0457 FOG: TPR repeat YP_005770802.1 COG0826 Collagenase and related proteases YP_005770804.1 COG1186 Protein chain release factor B YP_005770805.1 COG0303 Molybdopterin biosynthesis enzyme YP_005770806.1 COG1684 Flagellar biosynthesis pathway, component FliR YP_005770809.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005770810.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_005770811.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005770812.1 COG2089 Sialic acid synthase YP_005770813.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005770814.1 COG0815 Apolipoprotein N-acyltransferase YP_005770815.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_005770816.1 COG1190 Lysyl-tRNA synthetase (class II) YP_005770817.1 COG0112 Glycine/serine hydroxymethyltransferase YP_005770820.1 COG0162 Tyrosyl-tRNA synthetase YP_005770821.1 COG2862 Predicted membrane protein YP_005770822.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005770823.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_005770824.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_005770825.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_005770826.1 COG0149 Triosephosphate isomerase YP_005770827.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_005770828.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_005770829.1 COG0192 S-adenosylmethionine synthetase YP_005770830.1 COG0105 Nucleoside diphosphate kinase YP_005770832.1 COG0333 Ribosomal protein L32 YP_005770833.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_005770834.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_005770837.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005770838.1 COG0489 ATPases involved in chromosome partitioning YP_005770839.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005770842.1 COG0326 Molecular chaperone, HSP90 family YP_005770843.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005770844.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005770845.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_005770846.1 COG0471 Di- and tricarboxylate transporters YP_005770847.1 COG0575 CDP-diglyceride synthetase YP_005770848.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_005770852.1 COG1881 Phospholipid-binding protein YP_005770854.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005770855.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_005770857.1 COG1066 Predicted ATP-dependent serine protease YP_005770858.1 COG0225 Peptide methionine sulfoxide reductase YP_005770860.1 COG0730 Predicted permeases YP_005770862.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_005770864.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_005770865.1 COG1651 Protein-disulfide isomerase YP_005770867.1 COG0754 Glutathionylspermidine synthase YP_005770870.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005770872.1 COG0181 Porphobilinogen deaminase YP_005770873.1 COG0442 Prolyl-tRNA synthetase YP_005770874.1 COG0373 Glutamyl-tRNA reductase YP_005770875.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005770878.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_005770879.1 COG0642 Signal transduction histidine kinase YP_005770881.1 COG1706 Flagellar basal-body P-ring protein YP_005770882.1 COG0513 Superfamily II DNA and RNA helicases YP_005770883.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005770885.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_005770886.1 COG4239 ABC-type uncharacterized transport system, permease component YP_005770889.1 COG0104 Adenylosuccinate synthase YP_005770891.1 COG3334 Uncharacterized conserved protein YP_005770892.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_005770893.1 COG1570 Exonuclease VII, large subunit YP_005770894.1 COG2189 Adenine specific DNA methylase Mod YP_005770898.1 COG0863 DNA modification methylase YP_005770899.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005770900.1 COG0785 Cytochrome c biogenesis protein YP_005770901.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_005770902.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_005770904.1 COG0621 2-methylthioadenine synthetase YP_005770905.1 COG2121 Uncharacterized protein conserved in bacteria YP_005770909.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_005770910.1 COG0457 FOG: TPR repeat YP_005770911.1 COG0134 Indole-3-glycerol phosphate synthase YP_005770912.1 COG1145 Ferredoxin YP_005770913.1 COG0248 Exopolyphosphatase YP_005770914.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005770915.1 COG1560 Lauroyl/myristoyl acyltransferase YP_005770916.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_005770917.1 COG3400 Uncharacterized protein conserved in bacteria YP_005770918.1 COG0337 3-dehydroquinate synthetase YP_005770919.1 COG0668 Small-conductance mechanosensitive channel YP_005770920.1 COG0621 2-methylthioadenine synthetase YP_005770921.1 COG0465 ATP-dependent Zn proteases YP_005770925.1 COG0019 Diaminopimelate decarboxylase YP_005770926.1 COG1605 Chorismate mutase YP_005770927.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005770928.1 COG0388 Predicted amidohydrolase YP_005770929.1 COG1344 Flagellin and related hook-associated proteins YP_005770931.1 COG0261 Ribosomal protein L21 YP_005770932.1 COG0211 Ribosomal protein L27 YP_005770933.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_005770934.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005770935.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_005770936.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_005770937.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_005770938.1 COG0536 Predicted GTPase YP_005770941.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_005770944.1 COG0388 Predicted amidohydrolase YP_005770945.1 COG0726 Predicted xylanase/chitin deacetylase YP_005770947.1 COG0523 Putative GTPases (G3E family) YP_005770948.1 COG0477 Permeases of the major facilitator superfamily YP_005770952.1 COG0748 Putative heme iron utilization protein YP_005770953.1 COG0018 Arginyl-tRNA synthetase YP_005770954.1 COG1826 Sec-independent protein secretion pathway components YP_005770955.1 COG0194 Guanylate kinase YP_005770957.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005770959.1 COG2063 Flagellar basal body L-ring protein YP_005770960.1 COG1083 CMP-N-acetylneuraminic acid synthetase YP_005770961.1 COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase YP_005770962.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005770963.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_005770964.1 COG0171 NAD synthase YP_005770965.1 COG0059 Ketol-acid reductoisomerase YP_005770966.1 COG2894 Septum formation inhibitor-activating ATPase YP_005770967.1 COG0851 Septum formation topological specificity factor YP_005770968.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_005770969.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_005770970.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005770973.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005770974.1 COG0608 Single-stranded DNA-specific exonuclease YP_005770975.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_005770976.1 COG0671 Membrane-associated phospholipid phosphatase YP_005770977.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein YP_005770978.1 COG1536 Flagellar motor switch protein YP_005770979.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_005770980.1 COG1154 Deoxyxylulose-5-phosphate synthase YP_005770981.1 COG0481 Membrane GTPase LepA YP_005770982.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005770986.1 COG4786 Flagellar basal body rod protein YP_005770987.1 COG0477 Permeases of the major facilitator superfamily YP_005770988.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_005770989.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005770990.1 COG3893 Inactivated superfamily I helicase YP_005770991.1 COG0021 Transketolase YP_005770992.1 COG0196 FAD synthase YP_005770993.1 COG1189 Predicted rRNA methylase YP_005770995.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_005770997.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005770999.1 COG1787 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes YP_005771001.1 COG3376 High-affinity nickel permease YP_005771005.1 COG2608 Copper chaperone YP_005771006.1 COG2217 Cation transport ATPase YP_005771007.1 COG1183 Phosphatidylserine synthase YP_005771008.1 COG0465 ATP-dependent Zn proteases YP_005771009.1 COG2264 Ribosomal protein L11 methylase YP_005771010.1 COG0784 FOG: CheY-like receiver YP_005771014.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_005771015.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_005771016.1 COG0805 Sec-independent protein secretion pathway component TatC YP_005771017.1 COG1826 Sec-independent protein secretion pathway components YP_005771018.1 COG2255 Holliday junction resolvasome, helicase subunit YP_005771019.1 COG0413 Ketopantoate hydroxymethyltransferase YP_005771023.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005771024.1 COG0850 Septum formation inhibitor YP_005771025.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_005771026.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_005771027.1 COG0083 Homoserine kinase YP_005771028.1 COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination YP_005771029.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_005771030.1 COG0858 Ribosome-binding factor A YP_005771031.1 COG0779 Uncharacterized protein conserved in bacteria YP_005771032.1 COG1408 Predicted phosphohydrolases YP_005771033.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005771034.1 COG2404 Predicted phosphohydrolase (DHH superfamily) YP_005771035.1 COG1298 Flagellar biosynthesis pathway, component FlhA YP_005771036.1 COG0184 Ribosomal protein S15P/S13E YP_005771038.1 COG0757 3-dehydroquinate dehydratase II YP_005771039.1 COG0006 Xaa-Pro aminopeptidase YP_005771040.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_005771041.1 COG1419 Flagellar GTP-binding protein YP_005771042.1 COG0455 ATPases involved in chromosome partitioning YP_005771043.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_005771044.1 COG1868 Flagellar motor switch protein YP_005771045.1 COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation YP_005771046.1 COG2731 Beta-galactosidase, beta subunit YP_005771047.1 COG4731 Uncharacterized protein conserved in bacteria YP_005771048.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_005771049.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase YP_005771050.1 COG0789 Predicted transcriptional regulators YP_005771051.1 COG2214 DnaJ-class molecular chaperone YP_005771053.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005771054.1 COG0784 FOG: CheY-like receiver YP_005771055.1 COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase YP_005771056.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005771057.1 COG0833 Amino acid transporters YP_005771058.1 COG0558 Phosphatidylglycerophosphate synthase YP_005771060.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005771061.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005771062.1 COG0612 Predicted Zn-dependent peptidases YP_005771063.1 COG0167 Dihydroorotate dehydrogenase YP_005771064.1 COG0855 Polyphosphate kinase YP_005771065.1 COG0732 Restriction endonuclease S subunits YP_005771066.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005771067.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005771068.1 COG2604 Uncharacterized protein conserved in bacteria YP_005771071.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_005771073.1 COG1164 Oligoendopeptidase F YP_005771074.1 COG0475 Kef-type K+ transport systems, membrane components YP_005771076.1 COG0725 ABC-type molybdate transport system, periplasmic component YP_005771077.1 COG4149 ABC-type molybdate transport system, permease component YP_005771078.1 COG1118 ABC-type sulfate/molybdate transport systems, ATPase component YP_005771079.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005771081.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005771082.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005771083.1 COG1217 Predicted membrane GTPase involved in stress response YP_005771084.1 COG0477 Permeases of the major facilitator superfamily YP_005771085.1 COG1217 Predicted membrane GTPase involved in stress response YP_005771086.1 COG0270 Site-specific DNA methylase YP_005771088.1 COG0753 Catalase YP_005771093.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_005771094.1 COG0227 Ribosomal protein L28 YP_005771096.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005771097.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_005771099.1 COG0824 Predicted thioesterase YP_005771100.1 COG0733 Na+-dependent transporters of the SNF family YP_005771101.1 COG0733 Na+-dependent transporters of the SNF family YP_005771102.1 COG2829 Outer membrane phospholipase A YP_005771103.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_005771104.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005771106.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005771107.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005771109.1 COG0277 FAD/FMN-containing dehydrogenases YP_005771110.1 COG0289 Dihydrodipicolinate reductase YP_005771111.1 COG1112 Superfamily I DNA and RNA helicases and helicase subunits YP_005771116.1 COG3034 Uncharacterized protein conserved in bacteria YP_005771117.1 COG1159 GTPase YP_005771118.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_005771119.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_005771120.1 COG0359 Ribosomal protein L9 YP_005771121.1 COG0174 Glutamine synthetase YP_005771122.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005771123.1 COG0796 Glutamate racemase YP_005771124.1 COG1158 Transcription termination factor YP_005771125.1 COG0254 Ribosomal protein L31 YP_005771126.1 COG0313 Predicted methyltransferases YP_005771127.1 COG0566 rRNA methylases YP_005771129.1 COG1217 Predicted membrane GTPase involved in stress response YP_005771131.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_005771132.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005771133.1 COG0236 Acyl carrier protein YP_005771134.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005771135.1 COG0828 Ribosomal protein S21 YP_005771138.1 COG3059 Predicted membrane protein YP_005771139.1 COG0253 Diaminopimelate epimerase YP_005771140.1 COG0628 Predicted permease YP_005771142.1 COG0012 Predicted GTPase, probable translation factor YP_005771143.1 COG0260 Leucyl aminopeptidase YP_005771144.1 COG0586 Uncharacterized membrane-associated protein YP_005771145.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_005771147.1 COG0698 Ribose 5-phosphate isomerase RpiB YP_005771148.1 COG1994 Zn-dependent proteases YP_005771149.1 COG0681 Signal peptidase I YP_005771150.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_005771151.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_005771153.1 COG4692 Predicted neuraminidase (sialidase) YP_005771154.1 COG0418 Dihydroorotase YP_005771155.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_005771156.1 COG1886 Flagellar motor switch/type III secretory pathway protein YP_005771157.1 COG0177 Predicted EndoIII-related endonuclease YP_005771158.1 COG1918 Fe2+ transport system protein A YP_005771160.1 COG1559 Predicted periplasmic solute-binding protein YP_005771161.1 COG1146 Ferredoxin YP_005771162.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit YP_005771163.1 COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit YP_005771164.1 COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit YP_005771165.1 COG5610 Predicted hydrolase (HAD superfamily) YP_005771166.1 COG1943 Transposase and inactivated derivatives YP_005771167.1 COG0675 Transposase and inactivated derivatives YP_005771170.1 COG1495 Disulfide bond formation protein DsbB YP_005771173.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_005771174.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_005771175.1 COG0840 Methyl-accepting chemotaxis protein YP_005771178.1 COG1344 Flagellin and related hook-associated proteins YP_005771179.1 COG2231 Uncharacterized protein related to Endonuclease III YP_005771181.1 COG0407 Uroporphyrinogen-III decarboxylase YP_005771182.1 COG1538 Outer membrane protein YP_005771183.1 COG0845 Membrane-fusion protein YP_005771184.1 COG0841 Cation/multidrug efflux pump YP_005771185.1 COG0015 Adenylosuccinate lyase YP_005771187.1 COG0842 ABC-type multidrug transport system, permease component YP_005771188.1 COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain YP_005771189.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_005771190.1 COG0835 Chemotaxis signal transduction protein YP_005771191.1 COG0173 Aspartyl-tRNA synthetase YP_005771192.1 COG0563 Adenylate kinase and related kinases YP_005771193.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_005771195.1 COG0221 Inorganic pyrophosphatase YP_005771196.1 COG1193 Mismatch repair ATPase (MutS family) YP_005771198.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_005771199.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005771200.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis YP_005771201.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_005771202.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005771203.1 COG1479 Uncharacterized conserved protein YP_005771204.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) YP_005771205.1 COG1740 Ni,Fe-hydrogenase I small subunit YP_005771206.1 COG0374 Ni,Fe-hydrogenase I large subunit YP_005771207.1 COG1969 Ni,Fe-hydrogenase I cytochrome b subunit YP_005771208.1 COG0680 Ni,Fe-hydrogenase maturation factor YP_005771209.1 COG0218 Predicted GTPase YP_005771214.1 COG0603 Predicted PP-loop superfamily ATPase YP_005771215.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005771216.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_005771217.1 COG0778 Nitroreductase YP_005771218.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005771219.1 COG0762 Predicted integral membrane protein YP_005771220.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005771221.1 COG1210 UDP-glucose pyrophosphorylase YP_005771223.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_005771224.1 COG1027 Aspartate ammonia-lyase YP_005771225.1 COG1573 Uracil-DNA glycosylase YP_005771227.1 COG0560 Phosphoserine phosphatase YP_005771228.1 COG1528 Ferritin-like protein YP_005771229.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_005771230.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes YP_005771231.1 COG0612 Predicted Zn-dependent peptidases YP_005771232.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_005771233.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005771234.1 COG2956 Predicted N-acetylglucosaminyl transferase YP_005771235.1 COG0328 Ribonuclease HI YP_005771236.1 COG0571 dsRNA-specific ribonuclease YP_005771237.1 COG0082 Chorismate synthase YP_005771239.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005771240.1 COG0247 Fe-S oxidoreductase YP_005771241.1 COG4889 Predicted helicase YP_005771242.1 COG4889 Predicted helicase YP_005771243.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_005771247.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005771248.1 COG0582 Integrase YP_005771249.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005771250.1 COG0730 Predicted permeases YP_005771251.1 COG0673 Predicted dehydrogenases and related proteins YP_005771252.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005771255.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_005771256.1 COG1338 Flagellar biosynthesis pathway, component FliP YP_005771257.1 COG4772 Outer membrane receptor for Fe3+-dicitrate YP_005771258.1 COG0370 Fe2+ transport system protein B YP_005771259.1 COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB YP_005771260.1 COG0183 Acetyl-CoA acetyltransferase YP_005771261.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_005771262.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_005771263.1 COG2031 Short chain fatty acids transporter YP_005771264.1 COG3528 Uncharacterized protein conserved in bacteria YP_005771265.1 COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit YP_005771266.1 COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit YP_005771267.1 COG4647 Acetone carboxylase, gamma subunit YP_005771270.1 COG0818 Diacylglycerol kinase YP_005771271.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005771273.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_005771278.1 COG0178 Excinuclease ATPase subunit YP_005771281.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_005771284.1 COG1912 Uncharacterized conserved protein YP_005771287.1 COG1896 Predicted hydrolases of HD superfamily YP_005771288.1 COG3177 Uncharacterized conserved protein YP_005771289.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_005771290.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_005771291.1 COG0802 Predicted ATPase or kinase YP_005771292.1 COG2812 DNA polymerase III, gamma/tau subunits YP_005771293.1 COG1279 Lysine efflux permease YP_005771297.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_005771298.1 COG2704 Anaerobic C4-dicarboxylate transporter YP_005771301.1 COG0042 tRNA-dihydrouridine synthase YP_005771302.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005771305.1 COG1160 Predicted GTPases YP_005771306.1 COG2262 GTPases YP_005771308.1 COG0621 2-methylthioadenine synthetase YP_005771309.1 COG2236 Predicted phosphoribosyltransferases YP_005771310.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_005771311.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_005771312.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_005771313.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005771314.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_005771315.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005771316.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_005771317.1 COG0772 Bacterial cell division membrane protein YP_005771318.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005771319.1 COG3401 Fibronectin type 3 domain-containing protein YP_005771320.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_005771321.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005771322.1 COG4942 Membrane-bound metallopeptidase YP_005771323.1 COG1334 Uncharacterized flagellar protein FlaG YP_005771324.1 COG1345 Flagellar capping protein YP_005771325.1 COG1516 Flagellin-specific chaperone FliS YP_005771327.1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 YP_005771329.1 COG0388 Predicted amidohydrolase YP_005771330.1 COG2056 Predicted permease YP_005771331.1 COG0534 Na+-driven multidrug efflux pump YP_005771332.1 COG1418 Predicted HD superfamily hydrolase YP_005771333.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_005771335.1 COG0552 Signal recognition particle GTPase YP_005771336.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_005771339.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_005771340.1 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A YP_005771341.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_005771343.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_005771344.1 COG2070 Dioxygenases related to 2-nitropropane dioxygenase YP_005771345.1 COG0162 Tyrosyl-tRNA synthetase YP_005771346.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005771347.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_005771348.1 COG0528 Uridylate kinase YP_005771349.1 COG1427 Predicted periplasmic solute-binding protein YP_005771350.1 COG1049 Aconitase B YP_005771354.1 COG5022 Myosin heavy chain YP_005771355.1 COG2834 Outer membrane lipoprotein-sorting protein YP_005771356.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_005771357.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_005771360.1 COG2217 Cation transport ATPase YP_005771361.1 COG0606 Predicted ATPase with chaperone activity YP_005771362.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005771363.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005771364.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_005771367.1 COG0315 Molybdenum cofactor biosynthesis enzyme YP_005771368.1 COG0521 Molybdopterin biosynthesis enzymes YP_005771369.1 COG0314 Molybdopterin converting factor, large subunit YP_005771370.1 COG1977 Molybdopterin converting factor, small subunit YP_005771371.1 COG0807 GTP cyclohydrolase II YP_005771374.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_005771375.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_005771376.1 COG1451 Predicted metal-dependent hydrolase YP_005771377.1 COG4772 Outer membrane receptor for Fe3+-dicitrate YP_005771378.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_005771379.1 COG1580 Flagellar basal body-associated protein YP_005771380.1 COG0742 N6-adenine-specific methylase YP_005771383.1 COG1565 Uncharacterized conserved protein YP_005771384.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_005771385.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_005771386.1 COG1291 Flagellar motor component YP_005771387.1 COG1360 Flagellar motor protein YP_005771389.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component YP_005771390.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components YP_005771393.1 COG0322 Nuclease subunit of the excinuclease complex YP_005771394.1 COG0460 Homoserine dehydrogenase YP_005771395.1 COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase YP_005771396.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005771397.1 COG0492 Thioredoxin reductase YP_005771399.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_005771400.1 COG0724 RNA-binding proteins (RRM domain) YP_005771403.1 COG0356 F0F1-type ATP synthase, subunit a YP_005771404.1 COG0516 IMP dehydrogenase/GMP reductase YP_005771405.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005771406.1 COG0237 Dephospho-CoA kinase YP_005771407.1 COG0421 Spermidine synthase YP_005771409.1 COG1160 Predicted GTPases YP_005771410.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005771411.1 COG3018 Uncharacterized protein conserved in bacteria YP_005771413.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_005771414.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_005771416.1 COG0352 Thiamine monophosphate synthase YP_005771417.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_005771418.1 COG2145 Hydroxyethylthiazole kinase, sugar kinase family YP_005771420.1 COG0671 Membrane-associated phospholipid phosphatase YP_005771421.1 COG2958 Uncharacterized protein conserved in bacteria YP_005771422.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005771423.1 COG0516 IMP dehydrogenase/GMP reductase YP_005771424.1 COG0279 Phosphoheptose isomerase YP_005771425.1 COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase YP_005771426.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005771427.1 COG0241 Histidinol phosphatase and related phosphatases YP_005771428.1 COG2836 Uncharacterized conserved protein YP_005771429.1 COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor YP_005771432.1 COG0756 dUTPase YP_005771433.1 COG0782 Transcription elongation factor YP_005771434.1 COG0763 Lipid A disaccharide synthetase YP_005771436.1 COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) YP_005771437.1 COG1749 Flagellar hook protein FlgE YP_005771439.1 COG2134 CDP-diacylglycerol pyrophosphatase YP_005771440.1 COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism YP_005771443.1 COG0753 Catalase YP_005771444.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005771445.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_005771446.1 COG1432 Uncharacterized conserved protein YP_005771448.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_005771450.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_005771451.1 COG0215 Cysteinyl-tRNA synthetase YP_005771452.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005771453.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_005771454.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005771455.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005771456.1 COG1607 Acyl-CoA hydrolase YP_005771457.1 COG3309 Uncharacterized virulence-associated protein D YP_005771463.1 COG0409 Hydrogenase maturation factor YP_005771464.1 COG0298 Hydrogenase maturation factor YP_005771465.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_005771467.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_005771468.1 COG0282 Acetate kinase YP_005771469.1 COG0857 BioD-like N-terminal domain of phosphotransacetylase YP_005771471.1 COG1843 Flagellar hook capping protein YP_005771472.1 COG1749 Flagellar hook protein FlgE YP_005771474.1 COG0827 Adenine-specific DNA methylase YP_005771475.1 COG0210 Superfamily I DNA and RNA helicases YP_005771479.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005771480.1 COG0009 Putative translation factor (SUA5) YP_005771481.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_005771482.1 COG0670 Integral membrane protein, interacts with FtsH YP_005771483.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005771486.1 COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog YP_005771487.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_005771488.1 COG0585 Uncharacterized conserved protein YP_005771489.1 COG0501 Zn-dependent protease with chaperone function YP_005771490.1 COG0302 GTP cyclohydrolase I YP_005771491.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005771492.1 COG0496 Predicted acid phosphatase YP_005771494.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_005771495.1 COG0602 Organic radical activating enzymes YP_005771496.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005771497.1 COG1479 Uncharacterized conserved protein YP_005771499.1 COG0765 ABC-type amino acid transport system, permease component YP_005771500.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005771501.1 COG0787 Alanine racemase YP_005771502.1 COG1115 Na+/alanine symporter YP_005771503.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_005771504.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_005771507.1 COG1757 Na+/H+ antiporter YP_005771509.1 COG0582 Integrase YP_005771514.1 COG0827 Adenine-specific DNA methylase YP_005771515.1 COG1192 ATPases involved in chromosome partitioning YP_005771518.1 COG3843 Type IV secretory pathway, VirD2 components (relaxase) YP_005771520.1 COG3041 Uncharacterized protein conserved in bacteria YP_005771521.1 COG3505 Type IV secretory pathway, VirD4 components YP_005771525.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005771529.1 COG2948 Type IV secretory pathway, VirB10 components YP_005771530.1 COG3504 Type IV secretory pathway, VirB9 components YP_005771531.1 COG3736 Type IV secretory pathway, component VirB8 YP_005771533.1 COG0550 Topoisomerase IA YP_005771534.1 COG3451 Type IV secretory pathway, VirB4 components YP_005771540.1 COG1576 Uncharacterized conserved protein YP_005771541.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_005771543.1 COG1546 Uncharacterized protein (competence- and mitomycin-induced) YP_005771545.1 COG0778 Nitroreductase YP_005771546.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_005771547.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005771548.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_005771549.1 COG1579 Zn-ribbon protein, possibly nucleic acid-binding YP_005771550.1 COG0327 Uncharacterized conserved protein YP_005771551.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_005771552.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_005771554.1 COG0699 Predicted GTPases (dynamin-related) YP_005771555.1 COG0699 Predicted GTPases (dynamin-related) YP_005771556.1 COG3309 Uncharacterized virulence-associated protein D YP_005771558.1 COG3696 Putative silver efflux pump YP_005771559.1 COG0845 Membrane-fusion protein YP_005771561.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_005771562.1 COG0696 Phosphoglyceromutase YP_005771563.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_005771564.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005771565.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005771566.1 COG0849 Actin-like ATPase involved in cell division YP_005771567.1 COG0206 Cell division GTPase YP_005771571.1 COG1479 Uncharacterized conserved protein YP_005771572.1 COG0668 Small-conductance mechanosensitive channel YP_005771577.1 COG0439 Biotin carboxylase YP_005771578.1 COG1479 Uncharacterized conserved protein YP_005771581.1 COG1166 Arginine decarboxylase (spermidine biosynthesis) YP_005771582.1 COG0438 Glycosyltransferase YP_005771583.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_005771584.1 COG0500 SAM-dependent methyltransferases YP_005771586.1 COG0143 Methionyl-tRNA synthetase YP_005771587.1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases YP_005771588.1 COG0668 Small-conductance mechanosensitive channel YP_005771593.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_005771596.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_005771598.1 COG0520 Selenocysteine lyase YP_005771599.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005771600.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_005771601.1 COG0073 EMAP domain YP_005771602.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_005771603.1 COG0761 Penicillin tolerance protein YP_005771604.1 COG0539 Ribosomal protein S1 YP_005771605.1 COG0480 Translation elongation factors (GTPases) YP_005771606.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_005771607.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_005771608.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_005771609.1 COG0325 Predicted enzyme with a TIM-barrel fold YP_005771610.1 COG2908 Uncharacterized protein conserved in bacteria YP_005771611.1 COG0835 Chemotaxis signal transduction protein YP_005771612.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_005771613.1 COG0835 Chemotaxis signal transduction protein YP_005771614.1 COG2077 Peroxiredoxin YP_005771615.1 COG0605 Superoxide dismutase YP_005771616.1 COG0500 SAM-dependent methyltransferases YP_005771617.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_005771619.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005771622.1 COG0501 Zn-dependent protease with chaperone function YP_005771623.1 COG2890 Methylase of polypeptide chain release factors YP_005771624.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_005771627.1 COG1333 ResB protein required for cytochrome c biosynthesis YP_005771628.1 COG2143 Thioredoxin-related protein YP_005771629.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_005771631.1 COG1385 Uncharacterized protein conserved in bacteria YP_005771633.1 COG0717 Deoxycytidine deaminase YP_005771634.1 COG0511 Biotin carboxyl carrier protein YP_005771635.1 COG0439 Biotin carboxylase YP_005771638.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_005771639.1 COG0208 Ribonucleotide reductase, beta subunit YP_005771640.1 COG2518 Protein-L-isoaspartate carboxylmethyltransferase YP_005771641.1 COG0795 Predicted permeases YP_005771642.1 COG0101 Pseudouridylate synthase YP_005771643.1 COG1087 UDP-glucose 4-epimerase YP_005771646.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_005771648.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005771649.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase YP_005771650.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase YP_005771651.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_005771652.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_005771653.1 COG0837 Glucokinase YP_005771654.1 COG1064 Zn-dependent alcohol dehydrogenases YP_005771655.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005771656.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases YP_005771659.1 COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit YP_005771660.1 COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit YP_005771661.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit YP_005771662.1 COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit YP_005771663.1 COG0015 Adenylosuccinate lyase YP_005771665.1 COG0556 Helicase subunit of the DNA excision repair complex YP_005771668.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005771669.1 COG0405 Gamma-glutamyltransferase YP_005771670.1 COG1256 Flagellar hook-associated protein YP_005771673.1 COG0270 Site-specific DNA methylase YP_005771676.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_005771677.1 COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID YP_005771678.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_005771679.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_005771681.1 COG0848 Biopolymer transport protein YP_005771682.1 COG0811 Biopolymer transport proteins YP_005771683.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_005771684.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005771685.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_005771686.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_005771688.1 COG0711 F0F1-type ATP synthase, subunit b YP_005771689.1 COG0711 F0F1-type ATP synthase, subunit b YP_005771690.1 COG1475 Predicted transcriptional regulators YP_005771691.1 COG1192 ATPases involved in chromosome partitioning YP_005771692.1 COG0340 Biotin-(acetyl-CoA carboxylase) ligase YP_005771693.1 COG0223 Methionyl-tRNA formyltransferase YP_005771694.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_005771695.1 COG4487 Uncharacterized protein conserved in bacteria YP_005771697.1 COG0335 Ribosomal protein L19 YP_005771698.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_005771699.1 COG0806 RimM protein, required for 16S rRNA processing YP_005771700.1 COG1837 Predicted RNA-binding protein (contains KH domain) YP_005771701.1 COG0228 Ribosomal protein S16 YP_005771702.1 COG0541 Signal recognition particle GTPase YP_005771703.1 COG0525 Valyl-tRNA synthetase YP_005771704.1 COG1699 Uncharacterized protein conserved in bacteria YP_005771705.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005771708.1 COG0345 Pyrroline-5-carboxylate reductase YP_005771709.1 COG2184 Protein involved in cell division YP_005771711.1 COG0319 Predicted metal-dependent hydrolase YP_005771712.1 COG0716 Flavodoxins YP_005771713.1 COG0586 Uncharacterized membrane-associated protein YP_005771714.1 COG3197 Uncharacterized protein, possibly involved in nitrogen fixation YP_005771715.1 COG0492 Thioredoxin reductase YP_005771716.1 COG0477 Permeases of the major facilitator superfamily YP_005771717.1 COG0166 Glucose-6-phosphate isomerase YP_005771720.1 COG1966 Carbon starvation protein, predicted membrane protein YP_005771721.1 COG0765 ABC-type amino acid transport system, permease component YP_005771722.1 COG0765 ABC-type amino acid transport system, permease component YP_005771723.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005771724.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005771726.1 COG0738 Fucose permease YP_005771727.1 COG2252 Permeases YP_005771732.1 COG2890 Methylase of polypeptide chain release factors YP_005771734.1 COG0813 Purine-nucleoside phosphorylase YP_005771735.1 COG1015 Phosphopentomutase YP_005771736.1 COG1972 Nucleoside permease YP_005771737.1 COG1076 DnaJ-domain-containing proteins 1 YP_005771739.1 COG0477 Permeases of the major facilitator superfamily YP_005771740.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005771741.1 COG0475 Kef-type K+ transport systems, membrane components YP_005771742.1 COG0534 Na+-driven multidrug efflux pump YP_005771743.1 COG2814 Arabinose efflux permease YP_005771744.1 COG3338 Carbonic anhydrase YP_005771746.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_005771747.1 COG0124 Histidyl-tRNA synthetase YP_005771748.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005771751.1 COG0480 Translation elongation factors (GTPases) YP_005771752.1 COG0049 Ribosomal protein S7 YP_005771753.1 COG0048 Ribosomal protein S12 YP_005771754.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005771755.1 COG0222 Ribosomal protein L7/L12 YP_005771756.1 COG0244 Ribosomal protein L10 YP_005771757.1 COG0081 Ribosomal protein L1 YP_005771758.1 COG0080 Ribosomal protein L11 YP_005771759.1 COG0250 Transcription antiterminator YP_005771760.1 COG0690 Preprotein translocase subunit SecE YP_005771761.1 COG0267 Ribosomal protein L33 YP_005771762.1 COG0050 GTPases - translation elongation factors YP_005771763.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005771764.1 COG0546 Predicted phosphatases YP_005771765.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_005771766.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_005771767.1 COG1926 Predicted phosphoribosyltransferases YP_005771768.1 COG1452 Organic solvent tolerance protein OstA YP_005771770.1 COG0151 Phosphoribosylamine-glycine ligase YP_005771773.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005771774.1 COG0020 Undecaprenyl pyrophosphate synthase YP_005771775.1 COG0277 FAD/FMN-containing dehydrogenases YP_005771776.1 COG0607 Rhodanese-related sulfurtransferase YP_005771777.1 COG1587 Uroporphyrinogen-III synthase YP_005771778.1 COG0239 Integral membrane protein possibly involved in chromosome condensation YP_005771779.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005771780.1 COG2863 Cytochrome c553 YP_005771781.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005771782.1 COG0527 Aspartokinases YP_005771784.1 COG0470 ATPase involved in DNA replication YP_005771785.1 COG0294 Dihydropteroate synthase and related enzymes YP_005771787.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005771789.1 COG2952 Uncharacterized protein conserved in bacteria YP_005771790.1 COG0505 Carbamoylphosphate synthase small subunit YP_005771791.1 COG0388 Predicted amidohydrolase YP_005771794.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_005771795.1 COG0013 Alanyl-tRNA synthetase YP_005771796.1 COG2841 Uncharacterized protein conserved in bacteria YP_005771798.1 COG0238 Ribosomal protein S18 YP_005771799.1 COG0629 Single-stranded DNA-binding protein YP_005771800.1 COG0360 Ribosomal protein S6 YP_005771801.1 COG0593 ATPase involved in DNA replication initiation YP_005771802.1 COG0557 Exoribonuclease R YP_005771803.1 COG0169 Shikimate 5-dehydrogenase YP_005771805.1 COG4174 ABC-type uncharacterized transport system, permease component YP_005771806.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_005771807.1 COG0180 Tryptophanyl-tRNA synthetase YP_005771808.1 COG0500 SAM-dependent methyltransferases YP_005771809.1 COG1314 Preprotein translocase subunit SecG YP_005771810.1 COG0233 Ribosome recycling factor YP_005771811.1 COG0461 Orotate phosphoribosyltransferase YP_005771812.1 COG1714 Predicted membrane protein/domain YP_005771813.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_005771814.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_005771815.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases YP_005771816.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_005771817.1 COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 YP_005771820.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_005771821.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_005771822.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_005771823.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_005771824.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) YP_005771825.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_005771826.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_005771827.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_005771828.1 COG1729 Uncharacterized protein conserved in bacteria YP_005771829.1 COG1109 Phosphomannomutase YP_005771831.1 COG0159 Tryptophan synthase alpha chain YP_005771832.1 COG0133 Tryptophan synthase beta chain YP_005771833.1 COG0134 Indole-3-glycerol phosphate synthase YP_005771834.1 COG0547 Anthranilate phosphoribosyltransferase YP_005771835.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_005771836.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_005771837.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_005771838.1 COG2503 Predicted secreted acid phosphatase YP_005771839.1 COG2353 Uncharacterized conserved protein YP_005771840.1 COG0819 Putative transcription activator YP_005771841.1 COG3201 Nicotinamide mononucleotide transporter YP_005771842.1 COG1564 Thiamine pyrophosphokinase YP_005771846.1 COG0203 Ribosomal protein L17 YP_005771847.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_005771848.1 COG0522 Ribosomal protein S4 and related proteins YP_005771849.1 COG0100 Ribosomal protein S11 YP_005771850.1 COG0099 Ribosomal protein S13 YP_005771851.1 COG0257 Ribosomal protein L36 YP_005771852.1 COG0361 Translation initiation factor 1 (IF-1) YP_005771853.1 COG0024 Methionine aminopeptidase YP_005771854.1 COG0201 Preprotein translocase subunit SecY YP_005771855.1 COG0200 Ribosomal protein L15 YP_005771856.1 COG0098 Ribosomal protein S5 YP_005771857.1 COG0256 Ribosomal protein L18 YP_005771858.1 COG0097 Ribosomal protein L6P/L9E YP_005771859.1 COG0096 Ribosomal protein S8 YP_005771860.1 COG0199 Ribosomal protein S14 YP_005771861.1 COG0094 Ribosomal protein L5 YP_005771862.1 COG0198 Ribosomal protein L24 YP_005771863.1 COG0093 Ribosomal protein L14 YP_005771864.1 COG0186 Ribosomal protein S17 YP_005771865.1 COG0255 Ribosomal protein L29 YP_005771866.1 COG0197 Ribosomal protein L16/L10E YP_005771867.1 COG0092 Ribosomal protein S3 YP_005771868.1 COG0091 Ribosomal protein L22 YP_005771869.1 COG0185 Ribosomal protein S19 YP_005771870.1 COG0090 Ribosomal protein L2 YP_005771871.1 COG0089 Ribosomal protein L23 YP_005771872.1 COG0088 Ribosomal protein L4 YP_005771873.1 COG0087 Ribosomal protein L3 YP_005771874.1 COG0051 Ribosomal protein S10 YP_005771875.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_005771877.1 COG0164 Ribonuclease HII YP_005771879.1 COG0114 Fumarase YP_005771882.1 COG0845 Membrane-fusion protein YP_005771883.1 COG3696 Putative silver efflux pump YP_005771884.1 COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance) YP_005771885.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) YP_005771886.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005771888.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005771889.1 COG2214 DnaJ-class molecular chaperone YP_005771890.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_005771891.1 COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain YP_005771892.1 COG0811 Biopolymer transport proteins YP_005771893.1 COG0848 Biopolymer transport protein YP_005771894.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_005771896.1 COG3392 Adenine-specific DNA methylase YP_005771898.1 COG1045 Serine acetyltransferase YP_005771902.1 COG0780 Enzyme related to GTP cyclohydrolase I YP_005771903.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_005771904.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005771905.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_005771906.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_005771907.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_005771908.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005771909.1 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) YP_005771914.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_005771915.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_005771916.1 COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain YP_005771917.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_005771920.1 COG0788 Formyltetrahydrofolate hydrolase YP_005771921.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005771926.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_005771927.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) YP_005771928.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase YP_005771929.1 COG0691 tmRNA-binding protein YP_005771930.1 COG0811 Biopolymer transport proteins YP_005771931.1 COG0848 Biopolymer transport protein YP_005771932.1 COG0230 Ribosomal protein L34 YP_005771933.1 COG0594 RNase P protein component YP_005771934.1 COG0759 Uncharacterized conserved protein YP_005771935.1 COG0706 Preprotein translocase subunit YidC YP_005771936.1 COG0486 Predicted GTPase YP_005771945.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005771946.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005771947.1 COG0587 DNA polymerase III, alpha subunit YP_005771948.1 COG1858 Cytochrome c peroxidase YP_005771949.1 COG3187 Heat shock protein YP_005771951.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_005771952.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_005771953.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_005771956.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005771958.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005771959.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005771960.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005771962.1 COG0125 Thymidylate kinase YP_005771963.1 COG0669 Phosphopantetheine adenylyltransferase YP_005771964.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_005771966.1 COG1261 Flagellar basal body P-ring biosynthesis protein YP_005771967.1 COG0210 Superfamily I DNA and RNA helicases YP_005771968.1 COG0457 FOG: TPR repeat YP_005771969.1 COG0172 Seryl-tRNA synthetase YP_005771970.1 COG0388 Predicted amidohydrolase YP_005771971.1 COG1722 Exonuclease VII small subunit YP_005771972.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_005771973.1 COG1981 Predicted membrane protein YP_005771974.1 COG1739 Uncharacterized conserved protein YP_005771975.1 COG0842 ABC-type multidrug transport system, permease component YP_005771976.1 COG0842 ABC-type multidrug transport system, permease component YP_005771977.1 COG0845 Membrane-fusion protein YP_005771978.1 COG1538 Outer membrane protein YP_005771979.1 COG1253 Hemolysins and related proteins containing CBS domains YP_005771980.1 COG0306 Phosphate/sulphate permeases YP_005771981.1 COG0694 Thioredoxin-like proteins and domains YP_005771983.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_005771984.1 COG0176 Transaldolase YP_005771985.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_005771986.1 COG0193 Peptidyl-tRNA hydrolase YP_005771987.1 COG0795 Predicted permeases YP_005771988.1 COG3886 Predicted HKD family nuclease YP_005771990.1 COG3399 Uncharacterized protein conserved in bacteria YP_005771991.1 COG2217 Cation transport ATPase YP_005771992.1 COG4123 Predicted O-methyltransferase YP_005771993.1 COG0117 Pyrimidine deaminase YP_005771994.1 COG0786 Na+/glutamate symporter YP_005771995.1 COG1748 Saccharopine dehydrogenase and related proteins YP_005771996.1 COG0348 Polyferredoxin YP_005771997.1 COG0344 Predicted membrane protein YP_005771998.1 COG1539 Dihydroneopterin aldolase YP_005772000.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005772001.1 COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] YP_005772002.1 COG0195 Transcription elongation factor YP_005772006.1 COG1002 Type II restriction enzyme, methylase subunits YP_005772007.1 COG1002 Type II restriction enzyme, methylase subunits YP_005772009.1 COG2189 Adenine specific DNA methylase Mod YP_005772010.1 COG2189 Adenine specific DNA methylase Mod YP_005772011.1 COG1200 RecG-like helicase YP_005772014.1 COG0708 Exonuclease III YP_005772016.1 COG0593 ATPase involved in DNA replication initiation YP_005772017.1 COG0813 Purine-nucleoside phosphorylase YP_005772019.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_005772020.1 COG1351 Predicted alternative thymidylate synthase YP_005772022.1 COG0732 Restriction endonuclease S subunits YP_005772024.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005772025.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005772026.1 COG1451 Predicted metal-dependent hydrolase YP_005772029.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_005772030.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_005772031.1 COG0686 Alanine dehydrogenase YP_005772032.1 COG1064 Zn-dependent alcohol dehydrogenases YP_005772033.1 COG1479 Uncharacterized conserved protein YP_005772035.1 COG0061 Predicted sugar kinase YP_005772036.1 COG0497 ATPase involved in DNA repair YP_005772037.1 COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP YP_005772039.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005772040.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005772041.1 COG0036 Pentose-5-phosphate-3-epimerase YP_005772042.1 COG0158 Fructose-1,6-bisphosphatase YP_005772044.1 COG0232 dGTP triphosphohydrolase YP_005772046.1 COG1295 Predicted membrane protein YP_005772047.1 COG0502 Biotin synthase and related enzymes YP_005772049.1 COG3421 Uncharacterized protein conserved in bacteria YP_005772050.1 COG2189 Adenine specific DNA methylase Mod YP_005772051.1 COG1864 DNA/RNA endonuclease G, NUC1 YP_005772052.1 COG0287 Prephenate dehydrogenase YP_005772053.1 COG0466 ATP-dependent Lon protease, bacterial type YP_005772054.1 COG4105 DNA uptake lipoprotein YP_005772056.1 COG1699 Uncharacterized protein conserved in bacteria YP_005772057.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005772058.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_005772059.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_005772060.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_005772061.1 COG1792 Cell shape-determining protein YP_005772067.1 COG3451 Type IV secretory pathway, VirB4 components YP_005772068.1 COG0550 Topoisomerase IA YP_005772069.1 COG1943 Transposase and inactivated derivatives YP_005772070.1 COG0675 Transposase and inactivated derivatives YP_005772071.1 COG0550 Topoisomerase IA YP_005772072.1 COG3736 Type IV secretory pathway, component VirB8 YP_005772073.1 COG3504 Type IV secretory pathway, VirB9 components YP_005772074.1 COG2948 Type IV secretory pathway, VirB10 components YP_005772076.1 COG0457 FOG: TPR repeat YP_005772077.1 COG0612 Predicted Zn-dependent peptidases YP_005772078.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005772081.1 COG3505 Type IV secretory pathway, VirD4 components YP_005772084.1 COG3843 Type IV secretory pathway, VirD2 components (relaxase) YP_005772086.1 COG1192 ATPases involved in chromosome partitioning YP_005772087.1 COG0827 Adenine-specific DNA methylase YP_005772094.1 COG0582 Integrase YP_005772095.1 COG1061 DNA or RNA helicases of superfamily II YP_005772096.1 COG2189 Adenine specific DNA methylase Mod YP_005772097.1 COG2189 Adenine specific DNA methylase Mod YP_005772098.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005772099.1 COG0642 Signal transduction histidine kinase YP_005772100.1 COG0062 Uncharacterized conserved protein YP_005772101.1 COG0305 Replicative DNA helicase YP_005772102.1 COG0658 Predicted membrane metal-binding protein YP_005772103.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_005772106.1 COG0688 Phosphatidylserine decarboxylase YP_005772107.1 COG0379 Quinolinate synthase YP_005772108.1 COG0157 Nicotinate-nucleotide pyrophosphorylase YP_005772109.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005772110.1 COG4889 Predicted helicase YP_005772113.1 COG0793 Periplasmic protease YP_005772115.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005772116.1 COG0692 Uracil DNA glycosylase YP_005772117.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005772118.1 COG0126 3-phosphoglycerate kinase YP_005772119.1 COG0598 Mg2+ and Co2+ transporters YP_005772120.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005772122.1 COG0270 Site-specific DNA methylase YP_005772123.1 COG0270 Site-specific DNA methylase YP_005772124.1 COG0264 Translation elongation factor Ts YP_005772125.1 COG0052 Ribosomal protein S2 YP_005772126.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_005772127.1 COG3004 Na+/H+ antiporter YP_005772128.1 COG1862 Preprotein translocase subunit YajC YP_005772129.1 COG0342 Preprotein translocase subunit SecD YP_005772130.1 COG0341 Preprotein translocase subunit SecF YP_005772132.1 COG0495 Leucyl-tRNA synthetase YP_005772134.1 COG0285 Folylpolyglutamate synthase YP_005772135.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005772136.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005772137.1 COG1664 Integral membrane protein CcmA involved in cell shape determination YP_005772138.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_005772139.1 COG0723 Rieske Fe-S protein YP_005772140.1 COG1290 Cytochrome b subunit of the bc complex YP_005772141.1 COG2857 Cytochrome c1 YP_005772142.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_005772143.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_005772145.1 COG1106 Predicted ATPases YP_005772146.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005772147.1 COG1677 Flagellar hook-basal body protein YP_005772148.1 COG1558 Flagellar basal body rod protein YP_005772149.1 COG1815 Flagellar basal body protein YP_005772150.1 COG0772 Bacterial cell division membrane protein YP_005772151.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005772152.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_005772153.1 COG0450 Peroxiredoxin YP_005772154.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen YP_005772156.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005772158.1 COG0218 Predicted GTPase YP_005772159.1 COG1934 Uncharacterized protein conserved in bacteria YP_005772161.1 COG1778 Low specificity phosphatase (HAD superfamily) YP_005772162.1 COG0797 Lipoproteins YP_005772163.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005772164.1 COG0084 Mg-dependent DNase YP_005772165.1 COG0307 Riboflavin synthase alpha chain YP_005772166.1 COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB YP_005772167.1 COG1135 ABC-type metal ion transport system, ATPase component YP_005772168.1 COG2011 ABC-type metal ion transport system, permease component YP_005772170.1 COG0671 Membrane-associated phospholipid phosphatase YP_005772171.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005772172.1 COG0854 Pyridoxal phosphate biosynthesis protein YP_005772173.1 COG1995 Pyridoxal phosphate biosynthesis protein YP_005772174.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_005772175.1 COG4786 Flagellar basal body rod protein YP_005772176.1 COG4735 Uncharacterized protein conserved in bacteria YP_005772178.1 COG4735 Uncharacterized protein conserved in bacteria YP_005782946.1 COG5527 Protein involved in initiation of plasmid replication YP_005782947.1 COG1943 Transposase and inactivated derivatives YP_005782948.1 COG0675 Transposase and inactivated derivatives YP_005782951.1 COG3177 Uncharacterized conserved protein YP_005782952.1 COG3177 Uncharacterized conserved protein YP_005782953.1 COG0477 Permeases of the major facilitator superfamily YP_005782954.1 COG0675 Transposase and inactivated derivatives YP_005782955.1 COG1943 Transposase and inactivated derivatives YP_005782958.1 COG1944 Uncharacterized conserved protein YP_005782959.1 COG0778 Nitroreductase YP_005782961.1 COG1131 ABC-type multidrug transport system, ATPase component YP_005782962.1 COG0842 ABC-type multidrug transport system, permease component YP_005782963.1 F4 YP_005782965.1 COG0675 Transposase and inactivated derivatives YP_005782966.1 COG1943 Transposase and inactivated derivatives YP_005782968.1 F5 YP_005782970.1 COG3041 Uncharacterized protein conserved in bacteria YP_005782971.1 COG1432 Uncharacterized conserved protein