-- dump date   	20140619_115451
-- class       	Genbank::Contig
-- table       	contig_comment
-- id	comment
NC_014313.1	PROVISIONAL REFSEQ: This record has not yet been subject to finalPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.govPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org)PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGFPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANLPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps withPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by thePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## investigation_type    :: bacteria_archaeaPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Hyphomicrobium denitrificans ATCC 51888PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Hyphomicrobium denitrificans ATCC 51888 biotic_relationship   :: Free livingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Hyphomicrobium denitrificans ATCC 51888 biotic_relationship   :: Free living rel_to_oxygen         :: AerobePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Hyphomicrobium denitrificans ATCC 51888 biotic_relationship   :: Free living rel_to_oxygen         :: Aerobe environment           :: Fresh waterPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Hyphomicrobium denitrificans ATCC 51888 biotic_relationship   :: Free living rel_to_oxygen         :: Aerobe environment           :: Fresh water GOLD Stamp ID         :: Gi02055PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Hyphomicrobium denitrificans ATCC 51888 biotic_relationship   :: Free living rel_to_oxygen         :: Aerobe environment           :: Fresh water GOLD Stamp ID         :: Gi02055 Culture Collection ID :: ATCC 51888PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Hyphomicrobium denitrificans ATCC 51888 biotic_relationship   :: Free living rel_to_oxygen         :: Aerobe environment           :: Fresh water GOLD Stamp ID         :: Gi02055 Culture Collection ID :: ATCC 51888 type Strain           :: YesPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Hyphomicrobium denitrificans ATCC 51888 biotic_relationship   :: Free living rel_to_oxygen         :: Aerobe environment           :: Fresh water GOLD Stamp ID         :: Gi02055 Culture Collection ID :: ATCC 51888 type Strain           :: Yes Greengenes ID         :: 4619PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Hyphomicrobium denitrificans ATCC 51888 biotic_relationship   :: Free living rel_to_oxygen         :: Aerobe environment           :: Fresh water GOLD Stamp ID         :: Gi02055 Culture Collection ID :: ATCC 51888 type Strain           :: Yes Greengenes ID         :: 4619 rel_to_oxygen         :: AerobePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Hyphomicrobium denitrificans ATCC 51888 biotic_relationship   :: Free living rel_to_oxygen         :: Aerobe environment           :: Fresh water GOLD Stamp ID         :: Gi02055 Culture Collection ID :: ATCC 51888 type Strain           :: Yes Greengenes ID         :: 4619 rel_to_oxygen         :: Aerobe cell Shape            :: Rod-shapedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Hyphomicrobium denitrificans ATCC 51888 biotic_relationship   :: Free living rel_to_oxygen         :: Aerobe environment           :: Fresh water GOLD Stamp ID         :: Gi02055 Culture Collection ID :: ATCC 51888 type Strain           :: Yes Greengenes ID         :: 4619 rel_to_oxygen         :: Aerobe cell Shape            :: Rod-shaped Motility              :: MotilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Hyphomicrobium denitrificans ATCC 51888 biotic_relationship   :: Free living rel_to_oxygen         :: Aerobe environment           :: Fresh water GOLD Stamp ID         :: Gi02055 Culture Collection ID :: ATCC 51888 type Strain           :: Yes Greengenes ID         :: 4619 rel_to_oxygen         :: Aerobe cell Shape            :: Rod-shaped Motility              :: Motile sporulation           :: NonsporulatingPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Hyphomicrobium denitrificans ATCC 51888 biotic_relationship   :: Free living rel_to_oxygen         :: Aerobe environment           :: Fresh water GOLD Stamp ID         :: Gi02055 Culture Collection ID :: ATCC 51888 type Strain           :: Yes Greengenes ID         :: 4619 rel_to_oxygen         :: Aerobe cell Shape            :: Rod-shaped Motility              :: Motile sporulation           :: Nonsporulating Temperature Range     :: MesophilePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Hyphomicrobium denitrificans ATCC 51888 biotic_relationship   :: Free living rel_to_oxygen         :: Aerobe environment           :: Fresh water GOLD Stamp ID         :: Gi02055 Culture Collection ID :: ATCC 51888 type Strain           :: Yes Greengenes ID         :: 4619 rel_to_oxygen         :: Aerobe cell Shape            :: Rod-shaped Motility              :: Motile sporulation           :: Nonsporulating Temperature Range     :: Mesophile Gram Staining         :: gram-PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Hyphomicrobium denitrificans ATCC 51888 biotic_relationship   :: Free living rel_to_oxygen         :: Aerobe environment           :: Fresh water GOLD Stamp ID         :: Gi02055 Culture Collection ID :: ATCC 51888 type Strain           :: Yes Greengenes ID         :: 4619 rel_to_oxygen         :: Aerobe cell Shape            :: Rod-shaped Motility              :: Motile sporulation           :: Nonsporulating Temperature Range     :: Mesophile Gram Staining         :: gram- Diseases              :: NonePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Hyphomicrobium denitrificans ATCC 51888 biotic_relationship   :: Free living rel_to_oxygen         :: Aerobe environment           :: Fresh water GOLD Stamp ID         :: Gi02055 Culture Collection ID :: ATCC 51888 type Strain           :: Yes Greengenes ID         :: 4619 rel_to_oxygen         :: Aerobe cell Shape            :: Rod-shaped Motility              :: Motile sporulation           :: Nonsporulating Temperature Range     :: Mesophile Gram Staining         :: gram- Diseases              :: None ##Metadata-END##PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to CP002083. URL -- http://www.jgi.doe.gov JGI Project ID: 4085751 Source DNA available from Yves V. Brun (ybrun@indiana.edu) Organism available from ATCC: ATCC 51888 Contacts: Yves V. Brun (ybrun@indiana.edu)      Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##Metadata-START## investigation_type    :: bacteria_archaea project_name          :: Hyphomicrobium denitrificans ATCC 51888 biotic_relationship   :: Free living rel_to_oxygen         :: Aerobe environment           :: Fresh water GOLD Stamp ID         :: Gi02055 Culture Collection ID :: ATCC 51888 type Strain           :: Yes Greengenes ID         :: 4619 rel_to_oxygen         :: Aerobe cell Shape            :: Rod-shaped Motility              :: Motile sporulation           :: Nonsporulating Temperature Range     :: Mesophile Gram Staining         :: gram- Diseases              :: None ##Metadata-END## COMPLETENESS: full length.