-- dump date   	20250216_235958
-- class       	Genbank::Contig
-- table       	contig_comment
-- id	comment
NC_014962.1	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP002353.1.REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org)REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USAREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot springREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: AerobeREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release)REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: YesREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring inREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        OregonREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shapedREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: MotileREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45CREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, SangerREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20 CDSs (without protein)            :: 20REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20 CDSs (without protein)            :: 20 Pseudo Genes (ambiguous residues) :: 0 of 20REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20 CDSs (without protein)            :: 20 Pseudo Genes (ambiguous residues) :: 0 of 20 Pseudo Genes (frameshifted)       :: 1 of 20REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20 CDSs (without protein)            :: 20 Pseudo Genes (ambiguous residues) :: 0 of 20 Pseudo Genes (frameshifted)       :: 1 of 20 Pseudo Genes (incomplete)         :: 18 of 20REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20 CDSs (without protein)            :: 20 Pseudo Genes (ambiguous residues) :: 0 of 20 Pseudo Genes (frameshifted)       :: 1 of 20 Pseudo Genes (incomplete)         :: 18 of 20 Pseudo Genes (internal stop)      :: 3 of 20REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20 CDSs (without protein)            :: 20 Pseudo Genes (ambiguous residues) :: 0 of 20 Pseudo Genes (frameshifted)       :: 1 of 20 Pseudo Genes (incomplete)         :: 18 of 20 Pseudo Genes (internal stop)      :: 3 of 20 Pseudo Genes (multiple problems)  :: 1 of 20REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20 CDSs (without protein)            :: 20 Pseudo Genes (ambiguous residues) :: 0 of 20 Pseudo Genes (frameshifted)       :: 1 of 20 Pseudo Genes (incomplete)         :: 18 of 20 Pseudo Genes (internal stop)      :: 3 of 20 Pseudo Genes (multiple problems)  :: 1 of 20 CRISPR Arrays                     :: 2REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20 CDSs (without protein)            :: 20 Pseudo Genes (ambiguous residues) :: 0 of 20 Pseudo Genes (frameshifted)       :: 1 of 20 Pseudo Genes (incomplete)         :: 18 of 20 Pseudo Genes (internal stop)      :: 3 of 20 Pseudo Genes (multiple problems)  :: 1 of 20 CRISPR Arrays                     :: 2 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002353.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20 CDSs (without protein)            :: 20 Pseudo Genes (ambiguous residues) :: 0 of 20 Pseudo Genes (frameshifted)       :: 1 of 20 Pseudo Genes (incomplete)         :: 18 of 20 Pseudo Genes (internal stop)      :: 3 of 20 Pseudo Genes (multiple problems)  :: 1 of 20 CRISPR Arrays                     :: 2 ##Genome-Annotation-Data-END## COMPLETENESS: full length.
NC_014957.1	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP002354.1.REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org)REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaeaREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USAREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot springREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: AerobeREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: MissingREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGSREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release)REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: YesREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring inREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        OregonREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shapedREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: MotileREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45CREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram-REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: FinishedREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30xREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, SangerREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20 CDSs (without protein)            :: 20REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20 CDSs (without protein)            :: 20 Pseudo Genes (ambiguous residues) :: 0 of 20REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20 CDSs (without protein)            :: 20 Pseudo Genes (ambiguous residues) :: 0 of 20 Pseudo Genes (frameshifted)       :: 1 of 20REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20 CDSs (without protein)            :: 20 Pseudo Genes (ambiguous residues) :: 0 of 20 Pseudo Genes (frameshifted)       :: 1 of 20 Pseudo Genes (incomplete)         :: 18 of 20REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20 CDSs (without protein)            :: 20 Pseudo Genes (ambiguous residues) :: 0 of 20 Pseudo Genes (frameshifted)       :: 1 of 20 Pseudo Genes (incomplete)         :: 18 of 20 Pseudo Genes (internal stop)      :: 3 of 20REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20 CDSs (without protein)            :: 20 Pseudo Genes (ambiguous residues) :: 0 of 20 Pseudo Genes (frameshifted)       :: 1 of 20 Pseudo Genes (incomplete)         :: 18 of 20 Pseudo Genes (internal stop)      :: 3 of 20 Pseudo Genes (multiple problems)  :: 1 of 20REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20 CDSs (without protein)            :: 20 Pseudo Genes (ambiguous residues) :: 0 of 20 Pseudo Genes (frameshifted)       :: 1 of 20 Pseudo Genes (incomplete)         :: 18 of 20 Pseudo Genes (internal stop)      :: 3 of 20 Pseudo Genes (multiple problems)  :: 1 of 20 CRISPR Arrays                     :: 2REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20 CDSs (without protein)            :: 20 Pseudo Genes (ambiguous residues) :: 0 of 20 Pseudo Genes (frameshifted)       :: 1 of 20 Pseudo Genes (incomplete)         :: 18 of 20 Pseudo Genes (internal stop)      :: 3 of 20 Pseudo Genes (multiple problems)  :: 1 of 20 CRISPR Arrays                     :: 2 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP002354.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4084991 Source DNA and organism available from ATCC: ATCC 43644 (www.atcc.org) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)           Tanja Woyke (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##MIGS-Data-START## investigation_type  :: bacteria_archaea project_name        :: Isosphaera pallida IS1B, ATCC 43644 collection_date     :: Missing lat_lon             :: 44.86123 -121.201442 depth               :: Missing alt_elev            :: Missing country             :: USA environment         :: Fresh water, Hot spring num_replicons       :: 2 ref_biomaterial     :: ATCC 43644, DSM 9630 biotic_relationship :: Free living trophic_level       :: Missing rel_to_oxygen       :: Aerobe isol_growth_condt   :: Missing sequencing_meth     :: WGS assembly            :: Newbler v. 2.3 (pre-release) finishing_strategy  :: Finished GOLD Stamp ID       :: Gi02488 Type Strain         :: Yes Greengenes ID       :: 2884 Funding Program     :: DOE-GEBA 2007 Gene Calling Method :: IMG/ER 2.7 Isolation Site      :: algal mat from Kah-nee-tah Hot Spring in                        Oregon Cell Shape          :: Coccus-shaped Motility            :: Motile Temperature Range   :: Mesophile Temperature Optimum :: 45C Gram Staining       :: Gram- Diseases            :: None ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal           :: Finished Current Finishing Status :: Finished Assembly Method          :: Newbler v. 2.3 Genome Coverage          :: 30x Sequencing Technology    :: 454, Sanger ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000186345.1-RS_2024_09_25 Annotation Date                   :: 09/25/2024 03:51:39 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.8 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,732 CDSs (total)                      :: 3,673 Genes (coding)                    :: 3,653 CDSs (with protein)               :: 3,653 Genes (RNA)                       :: 59 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 47 ncRNAs                            :: 3 Pseudo Genes (total)              :: 20 CDSs (without protein)            :: 20 Pseudo Genes (ambiguous residues) :: 0 of 20 Pseudo Genes (frameshifted)       :: 1 of 20 Pseudo Genes (incomplete)         :: 18 of 20 Pseudo Genes (internal stop)      :: 3 of 20 Pseudo Genes (multiple problems)  :: 1 of 20 CRISPR Arrays                     :: 2 ##Genome-Annotation-Data-END## COMPLETENESS: full length.