-- dump date   	20140619_122148
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_003147866.1	PFAM: Bacterial dnaA protein helix-turn-helix domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA
YP_003147867.1	PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, central domain; DNA polymerase III beta subunit, N-terminal domain; TIGRFAM: DNA polymerase III, beta subunit
YP_003147868.1	PFAM: 6-phosphogluconate dehydrogenase, C-terminal domain; NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 6-phosphogluconate dehydrogenase (decarboxylating)
YP_003147869.1	PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein
YP_003147870.1	PFAM: Protein of unknown function (DUF721)
YP_003147871.1	PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit
YP_003147872.1	negatively supercoils closed circular double-stranded DNA
YP_003147877.1	PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_003147878.1	PFAM: Rhomboid family
YP_003147879.1	PFAM: Uncharacterised protein family (UPF0233)
YP_003147880.1	PFAM: Bacterial protein of unknown function (DUF881)
YP_003147881.1	PFAM: Protein kinase domain; PASTA domain
YP_003147882.1	PFAM: Protein kinase domain
YP_003147883.1	PFAM: Penicillin binding protein transpeptidase domain
YP_003147884.1	PFAM: Cell cycle protein
YP_003147885.1	PFAM: Protein phosphatase 2C
YP_003147886.1	PFAM: FHA domain
YP_003147887.1	PFAM: FHA domain
YP_003147889.1	PFAM: Phosphate transporter family
YP_003147890.1	PFAM: Pirin C-terminal cupin domain; Pirin
YP_003147893.1	PFAM: Glutaminase; Cyclic nucleotide-binding domain
YP_003147895.1	PFAM: short chain dehydrogenase
YP_003147896.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003147897.1	PFAM: alpha/beta hydrolase fold
YP_003147900.1	PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain
YP_003147901.1	PFAM: Allophanate hydrolase subunit 1; TIGRFAM: conserved hypothetical protein TIGR00370
YP_003147902.1	PFAM: LamB/YcsF family
YP_003147904.1	PFAM: Amino acid permease
YP_003147905.1	PFAM: FCD domain; Bacterial regulatory proteins, gntR family
YP_003147906.1	PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM:  hydrolase, CocE/NonD family
YP_003147908.1	PFAM: HNH endonuclease
YP_003147909.1	PFAM: Ankyrin repeat
YP_003147910.1	PFAM: Catalase-related immune-responsive; Catalase
YP_003147912.1	PFAM: Chalcone and stilbene synthases, C-terminal domain; Chalcone and stilbene synthases, N-terminal domain
YP_003147913.1	PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family
YP_003147914.1	PFAM: FAD dependent oxidoreductase
YP_003147917.1	PFAM: YeeE/YedE family (DUF395)
YP_003147918.1	PFAM: SirA-like protein
YP_003147919.1	PFAM: TOBE domain; ABC transporter
YP_003147922.1	PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family
YP_003147924.1	malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate
YP_003147925.1	PFAM: SH3 domain; Variant SH3 domain
YP_003147926.1	PFAM: Transposase DDE domain
YP_003147928.1	PFAM: Transposase, Mutator family
YP_003147930.1	PFAM: Globin; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_003147932.1	PFAM: Protein of unknown function (DUF1648)
YP_003147933.1	PFAM: short chain dehydrogenase
YP_003147934.1	PFAM: Peptidase family S51
YP_003147936.1	PFAM: Pyridoxal-dependent decarboxylase, pyridoxal binding domain; Pyridoxal-dependent decarboxylase, C-terminal sheet domain; TIGRFAM: diaminopimelate decarboxylase
YP_003147937.1	PFAM: Aminotransferase class I and II
YP_003147938.1	PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase
YP_003147939.1	PFAM: Dihydrodipicolinate reductase, C-terminus; Dihydrodipicolinate reductase, N-terminus; TIGRFAM: dihydrodipicolinate reductase
YP_003147941.1	PFAM: Prolyl oligopeptidase family
YP_003147942.1	PFAM: Type I 3-dehydroquinase; TIGRFAM: 3-dehydroquinate dehydratase, type I
YP_003147946.1	PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport
YP_003147947.1	PFAM: Major Facilitator Superfamily
YP_003147948.1	PFAM: MerR family regulatory protein
YP_003147949.1	PFAM: Major Facilitator Superfamily
YP_003147950.1	PFAM: Small Multidrug Resistance protein
YP_003147951.1	PFAM: Small Multidrug Resistance protein
YP_003147952.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_003147953.1	PFAM: DSBA-like thioredoxin domain
YP_003147954.1	PFAM: MarR family
YP_003147956.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003147957.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase
YP_003147958.1	PFAM: ABC-2 type transporter
YP_003147959.1	PFAM: ABC transporter
YP_003147960.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003147961.1	PFAM: NAD dependent epimerase/dehydratase family
YP_003147962.1	PFAM: CAAX amino terminal protease family
YP_003147963.1	PFAM: PhoD-like phosphatase
YP_003147964.1	PFAM: AMP-binding enzyme
YP_003147965.1	PFAM: AMP-binding enzyme; TIGRFAM: acetate--CoA ligase
YP_003147968.1	PFAM: MMPL family; TIGRFAM: Transport protein
YP_003147969.1	PFAM: AMP-binding enzyme
YP_003147970.1	PFAM: Uncharacterized conserved protein (DUF2183)
YP_003147971.1	PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg)
YP_003147972.1	PFAM: Rhodanese-like domain
YP_003147974.1	PFAM: Major Facilitator Superfamily
YP_003147975.1	PFAM: Bacterial regulatory hypothetical protein, lysR family
YP_003147976.1	TIGRFAM: DNA binding domain, excisionase family
YP_003147977.1	PFAM: Acetyltransferase (GNAT) family
YP_003147978.1	PFAM: Acetyltransferase (GNAT) family
YP_003147979.1	PFAM: alpha/beta hydrolase fold; TIGRFAM: proline iminopeptidase, Neisseria-type subfamily
YP_003147980.1	PFAM: Major Facilitator Superfamily
YP_003147981.1	PFAM: Bacterial regulatory protein, arsR family
YP_003147982.1	PFAM: CAAX amino terminal protease family
YP_003147983.1	PFAM: MerR family regulatory protein; MerR, DNA binding; TIGRFAM: redox-sensitive transcriptional activator SoxR
YP_003147984.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_003147985.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_003147987.1	PFAM: Acetyltransferase (GNAT) family
YP_003147990.1	PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family
YP_003147991.1	PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein
YP_003147992.1	PFAM: Acetyltransferase (GNAT) family
YP_003147993.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003147994.1	PFAM: FAD dependent oxidoreductase
YP_003147996.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2332)
YP_003147997.1	PFAM: Methyltransferase domain
YP_003148000.1	PFAM: O-methyltransferase
YP_003148001.1	PFAM: Asparaginase
YP_003148002.1	PFAM: PAP2 superfamily
YP_003148003.1	PFAM: Beta-lactamase
YP_003148004.1	PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_003148005.1	PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetases
YP_003148006.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_003148008.1	PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin biosynthesis protein RibD; riboflavin-specific deaminase C-terminal domain
YP_003148009.1	PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit
YP_003148010.1	PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II
YP_003148011.1	PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase
YP_003148012.1	PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC
YP_003148018.1	PFAM: ribonuclease
YP_003148021.1	PFAM: Diacylglycerol kinase catalytic domain
YP_003148022.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_003148023.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
YP_003148024.1	PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding
YP_003148026.1	PFAM: E1-E2 ATPase
YP_003148027.1	PFAM: BioY family
YP_003148028.1	PFAM: ABC transporter
YP_003148029.1	PFAM: Cobalt transport protein
YP_003148031.1	PFAM: MerR family regulatory protein; MerR, DNA binding; TIGRFAM: redox-sensitive transcriptional activator SoxR
YP_003148033.1	PFAM: Transposase, Mutator family
YP_003148034.1	PFAM: Bacterial regulatory protein, arsR family; Divergent AAA domain
YP_003148035.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
YP_003148038.1	PFAM: Peptidase family M48
YP_003148039.1	PFAM: Penicillinase repressor
YP_003148040.1	PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD
YP_003148041.1	PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB)
YP_003148042.1	PFAM: Bacterial Cytochrome Ubiquinol Oxidase
YP_003148043.1	PFAM: Thioesterase superfamily; TIGRFAM: phenylacetic acid degradation protein PaaD; uncharacterized domain 1
YP_003148044.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YP_003148045.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: phenylacetic acid degradation protein paaN
YP_003148047.1	PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit
YP_003148050.1	PFAM: Protein of unknown function (DUF1428)
YP_003148051.1	TIGRFAM: uncharacterized Actinobacterial protein TIGR03083
YP_003148053.1	PFAM: RibD C-terminal domain
YP_003148054.1	PFAM: Activator of Hsp90 ATPase homolog 1-like protein
YP_003148056.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003148057.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003148058.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003148059.1	PFAM: Protein of unknown function (DUF664)
YP_003148060.1	PFAM: Major Facilitator Superfamily
YP_003148061.1	PFAM: Bacterial regulatory protein, arsR family
YP_003148062.1	PFAM: NUDIX domain
YP_003148065.1	PFAM: Transposase
YP_003148066.1	PFAM: Transposase
YP_003148068.1	PFAM: Aminotransferase class-V; TIGRFAM: kynureninase
YP_003148069.1	PFAM: PIN domain
YP_003148071.1	PFAM: Tryptophan 2,3-dioxygenase; TIGRFAM: tryptophan 2,3-dioxygenase
YP_003148072.1	PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins
YP_003148073.1	PFAM: Methyltransferase domain
YP_003148077.1	PFAM: Major Facilitator Superfamily
YP_003148078.1	PFAM: Pirin C-terminal cupin domain; Pirin
YP_003148080.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_003148081.1	PFAM: Fructosamine kinase
YP_003148082.1	PFAM: Subtilase family
YP_003148083.1	PFAM: Membrane protein of unknown function
YP_003148084.1	PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase
YP_003148085.1	PFAM: Dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, alpha subunit
YP_003148086.1	PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain
YP_003148087.1	PFAM: Biotin-requiring enzyme; 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain
YP_003148088.1	PFAM: Major Facilitator Superfamily
YP_003148090.1	PFAM: HNH endonuclease
YP_003148096.1	PFAM: ChaB
YP_003148097.1	PFAM: Sucrase/ferredoxin-like
YP_003148098.1	PFAM: Cupin superfamily protein
YP_003148100.1	PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase
YP_003148102.1	PFAM: Rv0623-like transcription factor
YP_003148103.1	PFAM: PIN domain
YP_003148104.1	PFAM: Domain of unknown function (DUF1994)
YP_003148105.1	TIGRFAM: uncharacterized Actinobacterial protein TIGR03083
YP_003148106.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2200)
YP_003148107.1	PFAM: HNH endonuclease
YP_003148109.1	PFAM: Aminotransferase class I and II
YP_003148110.1	PFAM: GDSL-like Lipase/Acylhydrolase
YP_003148111.1	PFAM: Glutathione peroxidase
YP_003148112.1	PFAM: Integral membrane protein DUF6
YP_003148115.1	PFAM: NAD dependent epimerase/dehydratase family
YP_003148116.1	PFAM: YbaK / prolyl-tRNA synthetases associated domain
YP_003148117.1	PFAM: Activator of Hsp90 ATPase homolog 1-like protein
YP_003148118.1	PFAM: Beta-lactamase
YP_003148122.1	PFAM: Glutathione peroxidase
YP_003148123.1	PFAM: B3/4 domain
YP_003148124.1	PFAM:  FMN-binding domain
YP_003148125.1	PFAM: Acetyltransferase (GNAT) family
YP_003148126.1	PFAM: Acetyltransferase (GNAT) family
YP_003148127.1	PFAM: XFP N-terminal domain; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; XFP C-terminal domain
YP_003148130.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003148131.1	PFAM: MarR family
YP_003148132.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_003148133.1	TIGRFAM: conserved hypothetical protein TIGR03086; uncharacterized Actinobacterial protein TIGR03083
YP_003148135.1	PFAM: ABC transporter
YP_003148136.1	PFAM: Bacterial regulatory proteins, gntR family
YP_003148137.1	PFAM: ABC transporter
YP_003148139.1	PFAM: Hydroxyethylthiazole kinase family; TIGRFAM: hydroxyethylthiazole kinase
YP_003148140.1	PFAM: Aldo/keto reductase family
YP_003148141.1	PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase
YP_003148142.1	PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase
YP_003148143.1	PFAM: Pyridoxamine 5'-phosphate oxidase
YP_003148144.1	PFAM: FMN-dependent dehydrogenase
YP_003148145.1	PFAM: MerR family regulatory protein; Bacterial transcription activator, effector binding domain
YP_003148148.1	PFAM: Alanine dehydrogenase/PNT, N-terminal domain; Alanine dehydrogenase/PNT, C-terminal domain; TIGRFAM: alanine dehydrogenase
YP_003148149.1	PFAM: Carbon starvation protein CstA
YP_003148151.1	PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase (arsA)
YP_003148152.1	PFAM: Vitamin K epoxide reductase family
YP_003148153.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_003148154.1	PFAM: NAD synthase; TIGRFAM: NAD+ synthetase
YP_003148155.1	PFAM: short chain dehydrogenase
YP_003148157.1	PFAM: Major Facilitator Superfamily
YP_003148158.1	PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain
YP_003148159.1	PFAM: Arginase family; TIGRFAM: formimidoylglutamase
YP_003148160.1	PFAM: AhpC/TSA family; TIGRFAM: peroxiredoxin
YP_003148161.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: alkyl hydroperoxide reductase, F subunit
YP_003148162.1	PFAM: LysR substrate binding domain; Bacterial regulatory hypothetical protein, lysR family
YP_003148163.1	PFAM: Acetyltransferase (GNAT) family
YP_003148164.1	PFAM: Ion channel; TrkA-C domain; TrkA-N domain
YP_003148166.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003148167.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; HAMP domain; His Kinase A (phosphoacceptor) domain
YP_003148169.1	PFAM: OmpA family
YP_003148172.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: conserved hypothetical protein TIGR00096
YP_003148174.1	PFAM: tRNA synthetases class I (M); TIGRFAM: methionyl-tRNA synthetase
YP_003148175.1	PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family
YP_003148178.1	PFAM: NlpC/P60 family; Glycosyl transferase family 2
YP_003148181.1	PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase
YP_003148182.1	PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase
YP_003148183.1	PFAM: ABC transporter
YP_003148184.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003148185.1	PFAM: Polyphosphate kinase 2
YP_003148186.1	PFAM: MarR family
YP_003148187.1	PFAM: Nuclear transport factor 2 (NTF2) domain
YP_003148189.1	PFAM: Uncharacterized protein family UPF0007; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
YP_003148190.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP
YP_003148191.1	PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form
YP_003148192.1	PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase
YP_003148193.1	PFAM: Phosphoglycerate mutase family; NUDIX domain
YP_003148194.1	PFAM: Polyphosphate kinase
YP_003148195.1	PFAM: Acetyltransferase (GNAT) family; TIGRFAM: mycothiol biosynthesis acetyltransferase
YP_003148196.1	PFAM: Transcriptional regulatory protein, C terminal
YP_003148198.1	PFAM: Domain of unknown function (DUF1794)
YP_003148199.1	PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain
YP_003148200.1	PFAM: Aminomethyltransferase folate-binding domain; TIGRFAM: folate-binding protein YgfZ
YP_003148201.1	PFAM: Domain of unknown function (DUF2382); PRC-barrel domain; TIGRFAM: conserved domain
YP_003148202.1	PFAM: L-asparaginase II
YP_003148203.1	PFAM: Protein of unknown function (DUF2516)
YP_003148204.1	PFAM: alpha/beta hydrolase fold
YP_003148206.1	PFAM: Glycosyl transferases group 1
YP_003148207.1	PFAM: Protein of unknown function (DUF2596)
YP_003148208.1	PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphoglycerate mutase, BPG-dependent, family 1
YP_003148209.1	PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU
YP_003148210.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003148211.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003148213.1	PFAM: CarD-like/TRCF domain
YP_003148214.1	PFAM: YgbB family; Uncharacterized protein family UPF0007; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_003148215.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase
YP_003148216.1	PFAM: Metallo-beta-lactamase superfamily
YP_003148217.1	PFAM: DALR domain; tRNA synthetases class I (C) catalytic domain; TIGRFAM: cysteinyl-tRNA synthetase
YP_003148218.1	PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, , group 3
YP_003148220.1	PFAM: Bacterial extracellular solute-binding protein
YP_003148221.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003148222.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003148223.1	PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; Bacterial regulatory proteins, lacI family
YP_003148224.1	PFAM: Trehalose-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB
YP_003148225.1	PFAM: Glycosyltransferase family 20; TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]
YP_003148226.1	PFAM: Protein kinase domain
YP_003148227.1	PFAM: Transglycosylase-like domain
YP_003148228.1	PFAM: Bacterial SH3 domain; Transglycosylase-like domain
YP_003148229.1	PFAM: Luciferase-like monooxygenase
YP_003148231.1	PFAM: Metallo-beta-lactamase superfamily
YP_003148232.1	PFAM: Thioredoxin
YP_003148233.1	PFAM: Glucose-6-phosphate dehydrogenase, C-terminal domain; Glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase
YP_003148234.1	PFAM: IclR helix-turn-helix domain
YP_003148235.1	PFAM: Major Facilitator Superfamily
YP_003148236.1	PFAM: FAD dependent oxidoreductase
YP_003148237.1	PFAM: ABC transporter
YP_003148238.1	PFAM: ABC transporter
YP_003148239.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003148240.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003148241.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_003148242.1	PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport
YP_003148243.1	PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain
YP_003148244.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase
YP_003148245.1	PFAM: Predicted permease
YP_003148246.1	PFAM: ABC transporter
YP_003148247.1	PFAM: Cysteine-rich domain
YP_003148248.1	PFAM: Uncharacterised ACR, YkgG family COG1556; TIGRFAM: 2[4Fe-4S] protein
YP_003148249.1	PFAM: Uncharacterised ACR, YkgG family COG1556
YP_003148250.1	PFAM: Peptidase family S58
YP_003148252.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM:  NAD(P)H quinone oxidoreductase, PIG3 family
YP_003148253.1	PFAM: Protein of unknown function (DUF461)
YP_003148254.1	PFAM: Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family; Tat-translocated enzyme
YP_003148255.1	PFAM: Trypsin
YP_003148256.1	PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_003148257.1	PFAM: Sodium:solute symporter family; TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter
YP_003148258.1	catalyzes the degradation of histidine to urocanate and ammmonia
YP_003148259.1	PFAM: Molybdopterin oxidoreductase Fe4S4 domain
YP_003148260.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: formate dehydrogenase, alpha subunit, proteobacterial-type
YP_003148261.1	PFAM: 4Fe-4S binding domain
YP_003148263.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein
YP_003148264.1	PFAM: L-seryl-tRNA selenium transferase; TIGRFAM: seryl-tRNA(sec) selenium transferase
YP_003148265.1	PFAM: Elongation factor SelB, winged helix; Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; TIGRFAM: selenocysteine-specific elongation factor SelB
YP_003148266.1	PFAM: Beta-eliminating lyase
YP_003148267.1	catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism
YP_003148271.1	PFAM: FAD linked oxidases, C-terminal domain; FAD binding domain; Cysteine-rich domain
YP_003148272.1	PFAM: Shikimate / quinate 5-dehydrogenase
YP_003148273.1	PFAM: FAD dependent oxidoreductase
YP_003148274.1	PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein
YP_003148275.1	PFAM: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
YP_003148276.1	PFAM: Aldehyde dehydrogenase family
YP_003148277.1	PFAM: Protein of unknown function (DUF1338); TIGRFAM: phage virion morphogenesis ( tail completion) protein
YP_003148278.1	PFAM: Bacterial regulatory hypothetical protein, lysR family; LysR substrate binding domain
YP_003148279.1	PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
YP_003148280.1	PFAM:  peptidoglycan binding domain; Family of unknown function (DUF1028)
YP_003148282.1	catalyzes the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway
YP_003148285.1	PFAM: Peptidase family M20/M25/M40; TIGRFAM: amidohydrolase
YP_003148286.1	PFAM:  peptidoglycan binding domain; Predicted Peptidoglycan domain; NlpC/P60 family; Bacterial SH3 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003148287.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase
YP_003148288.1	PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain
YP_003148290.1	PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); Biotin-requiring enzyme; e3 binding domain
YP_003148291.1	PFAM: Transketolase, pyrimidine binding domain; Transketolase, C-terminal domain
YP_003148292.1	PFAM: Dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, alpha subunit
YP_003148293.1	PFAM: alpha/beta hydrolase fold
YP_003148295.1	PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: ABC transporter periplasmic binding protein, thiB subfamily
YP_003148296.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003148297.1	PFAM: ABC transporter
YP_003148298.1	PFAM: GAF domain; ANTAR domain
YP_003148299.1	PFAM: Amino acid permease; TIGRFAM: arginine/ornithine antiporter
YP_003148300.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003148301.1	PFAM: MMPL family
YP_003148302.1	PFAM: Major Facilitator Superfamily
YP_003148303.1	PFAM: Major Facilitator Superfamily
YP_003148304.1	PFAM: CAAX amino terminal protease family
YP_003148305.1	PFAM: Siderophore-interacting protein; Siderophore-interacting FAD-binding domain
YP_003148306.1	PFAM: Protein of unknown function DUF88; TIGRFAM: conserved hypothetical protein TIGR00288
YP_003148309.1	PFAM: Phosphatidylethanolamine-binding protein; TIGRFAM: conserved hypothetical protein TIGR00481
YP_003148310.1	TIGRFAM: conserved hypothetical protein TIGR03086; uncharacterized Actinobacterial protein TIGR03083
YP_003148311.1	PFAM: Alanine racemase, N-terminal domain
YP_003148312.1	PFAM: Aminotransferase class IV
YP_003148314.1	PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase
YP_003148315.1	PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase
YP_003148316.1	PFAM: Cobalamin-independent synthase, Catalytic domain
YP_003148317.1	PFAM: Phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
YP_003148319.1	PFAM: MerR family regulatory protein; TIGRFAM: DNA binding domain, excisionase family
YP_003148321.1	PFAM: Integral membrane protein DUF6
YP_003148322.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_003148323.1	PFAM: Transposase
YP_003148325.1	PFAM: Multicopper oxidase; Multicopper oxidase; Multicopper oxidase; TIGRFAM: copper-resistance protein, CopA family
YP_003148327.1	PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain
YP_003148328.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003148329.1	PFAM: Heavy-metal-associated domain
YP_003148330.1	PFAM: haloacid dehalogenase-like hydrolase; E1-E2 ATPase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase
YP_003148331.1	PFAM: Domain of unknown function (DUF305)
YP_003148333.1	PFAM: alpha/beta hydrolase fold
YP_003148334.1	PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family
YP_003148336.1	PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit
YP_003148337.1	PFAM: STAS domain; Sulfate transporter family
YP_003148338.1	PFAM: Major Facilitator Superfamily
YP_003148339.1	PFAM: Acetyltransferase (GNAT) family
YP_003148340.1	PFAM: Domain of unknown function (DUF1992)
YP_003148341.1	PFAM: Protein of unknown function, DUF393
YP_003148342.1	PFAM: Domain of unknown function (DUF389); TIGRFAM: conserved hypothetical protein TIGR00341; uncharacterized hydrophobic domain
YP_003148343.1	PFAM: LysE type translocator
YP_003148344.1	PFAM: Rieske [2Fe-2S] domain
YP_003148345.1	PFAM: Polyketide cyclase / dehydrase and lipid transport; Pterin 4 alpha carbinolamine dehydratase
YP_003148347.1	The second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione
YP_003148348.1	PFAM: Domain of unknown function (DUF1704); TIGRFAM: conserved hypothetical protein
YP_003148349.1	PFAM: N-formylglutamate amidohydrolase
YP_003148350.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; Domain related to MnhB subunit of Na+/H+ antiporter
YP_003148351.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_003148352.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_003148354.1	PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF)
YP_003148355.1	PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit
YP_003148356.1	TIGRFAM: uncharacterized Actinobacterial protein TIGR03083
YP_003148359.1	PFAM: ABC transporter
YP_003148361.1	PFAM: short chain dehydrogenase
YP_003148363.1	PFAM: RibD C-terminal domain
YP_003148364.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003148365.1	PFAM: Bacterial regulatory protein, arsR family
YP_003148368.1	PFAM: Transposase
YP_003148372.1	PFAM: short chain dehydrogenase
YP_003148373.1	PFAM: short chain dehydrogenase
YP_003148374.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003148375.1	PFAM: Transposase, Mutator family
YP_003148377.1	TIGRFAM: conserved hypothetical protein
YP_003148378.1	TIGRFAM: conserved hypothetical protein
YP_003148379.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
YP_003148380.1	PFAM: Beta-lactamase
YP_003148381.1	PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK
YP_003148382.1	PFAM: GrpE
YP_003148383.1	PFAM: DnaJ domain; DnaJ C terminal region
YP_003148384.1	PFAM: MerR family regulatory protein
YP_003148385.1	PFAM:  cell wall binding repeat 2; PA domain; Subtilase family; Peptidase inhibitor I9
YP_003148386.1	PFAM:  cell wall binding repeat 2; Subtilase family; Peptidase inhibitor I9
YP_003148387.1	PFAM: C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB
YP_003148388.1	PFAM: short chain dehydrogenase
YP_003148390.1	PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III (xth); exodeoxyribonuclease III
YP_003148392.1	PFAM: Major Facilitator Superfamily
YP_003148393.1	PFAM: short chain dehydrogenase
YP_003148394.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_003148395.1	PFAM: Major Facilitator Superfamily
YP_003148396.1	PFAM: SpoU rRNA Methylase family
YP_003148397.1	catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate
YP_003148399.1	PFAM: Domain of unknown function DUF81
YP_003148400.1	PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit
YP_003148401.1	PFAM: Bacterial regulatory proteins, gntR family
YP_003148402.1	PFAM: Citrate transporter
YP_003148403.1	PFAM: Acetyltransferase (GNAT) family
YP_003148404.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
YP_003148409.1	PFAM: Acetyltransferase (GNAT) family
YP_003148410.1	PFAM: Sir2 family
YP_003148411.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003148413.1	PFAM: Macro domain
YP_003148414.1	PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
YP_003148415.1	PFAM: Phosphoribosylglycinamide synthetase, C domain; Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; TIGRFAM: phosphoribosylamine--glycine ligase
YP_003148416.1	PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase
YP_003148417.1	PFAM: Fic/DOC family; TIGRFAM: death-on-curing family protein
YP_003148423.1	PFAM: Phosphoribosylformylglycinamidine (FGAM) synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS protein
YP_003148424.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_003148425.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_003148430.1	PFAM: Aminotransferase class I and II
YP_003148432.1	PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain
YP_003148433.1	PFAM: Amidinotransferase; TIGRFAM: arginine deiminase
YP_003148436.1	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway
YP_003148437.1	PFAM: AIR synthase related protein, C-terminal domain; AIR synthase related protein, N-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase
YP_003148440.1	PFAM: Copper resistance protein CopC
YP_003148441.1	PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: conserved hypothetical protein TIGR00257
YP_003148443.1	E3 component of alpha keto acid dehydrogenase complexes LpdC; forms a homodimer; binds one molecule of FAD monomer; catalyzes NAD+-dependent oxidation of dihydrolipoyl cofactors that are covalently linked to the E2 component
YP_003148444.1	PFAM: ACT domain; TIGRFAM: acetolactate synthase, small subunit
YP_003148445.1	PFAM: chorismate binding enzyme; Glutamine amidotransferase class-I
YP_003148446.1	PFAM: SNARE associated Golgi protein
YP_003148447.1	PFAM: PHP domain
YP_003148448.1	PFAM: Acetyltransferase (GNAT) family
YP_003148449.1	PFAM: Cupin domain
YP_003148451.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003148452.1	PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain
YP_003148453.1	PFAM: Formate/nitrite transporter
YP_003148459.1	PFAM: ThiF family; TIGRFAM: UbiD family decarboxylases
YP_003148461.1	PFAM: Patatin-like phospholipase
YP_003148466.1	PFAM: Transposase, Mutator family
YP_003148468.1	PFAM: Transposase
YP_003148470.1	PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003148471.1	PFAM: TrwC relaxase; TIGRFAM: conjugative relaxase domain, TrwC/TraI family
YP_003148472.1	PFAM: short chain dehydrogenase
YP_003148473.1	PFAM: Sigma-70 region 2; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003148474.1	PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase
YP_003148475.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2086)
YP_003148478.1	TIGRFAM: DNA alkylation damage repair protein AlkB
YP_003148479.1	PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I
YP_003148480.1	PFAM: HhH-GPD superfamily base excision DNA repair protein; AlkA N-terminal domain
YP_003148481.1	PFAM: Bacterial regulatory hypothetical proteins, AraC family
YP_003148483.1	PFAM: Transposase, Mutator family
YP_003148484.1	PFAM: Domain of unknown function (DUF955)
YP_003148485.1	PFAM: Bifunctional DNA primase/polymerase, N-terminal; Primase C terminal 1 (PriCT-1)
YP_003148488.1	PFAM: ParB-like nuclease domain
YP_003148490.1	PFAM: Peptidase family M23
YP_003148491.1	PFAM: Phage integrase family
YP_003148495.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003148496.1	PFAM: ABC transporter
YP_003148507.1	PFAM: Single-strand binding protein family
YP_003148510.1	PFAM: DEAD/DEAH box helicase; Helicase conserved C-terminal domain; TIGRFAM: ATP-dependent DNA helicase, RecQ family
YP_003148511.1	PFAM: ABC transporter
YP_003148513.1	PFAM: ABC transporter
YP_003148515.1	PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin
YP_003148516.1	PFAM: Isochorismatase family
YP_003148517.1	PFAM: DEAD/DEAH box helicase; Helicase conserved C-terminal domain
YP_003148519.1	PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate ABC transporter, phosphate-binding protein
YP_003148520.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC
YP_003148521.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA
YP_003148522.1	PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein
YP_003148523.1	PFAM: Transposase
YP_003148525.1	PFAM: PspA/IM30 family
YP_003148526.1	PFAM: Domain of unknown function (DUF477)
YP_003148527.1	PFAM: CarD-like/TRCF domain; Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TRCF domain; TIGRFAM: transcription-repair coupling factor (mfd)
YP_003148528.1	PFAM: MazG nucleotide pyrophosphohydrolase domain
YP_003148529.1	PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase
YP_003148530.1	PFAM: Septum formation initiator
YP_003148531.1	PFAM: Protein of unknown function (DUF501)
YP_003148532.1	PFAM: Ppx/GppA phosphatase family
YP_003148533.1	PFAM: Protein of unknown function (DUF1112)
YP_003148534.1	PFAM: 5'-nucleotidase, C-terminal domain; Calcineurin-like phosphoesterase
YP_003148536.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_003148537.1	PFAM: GDSL-like Lipase/Acylhydrolase
YP_003148538.1	PFAM: NAD dependent epimerase/dehydratase family
YP_003148539.1	PFAM: AMP-binding enzyme
YP_003148540.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_003148541.1	PFAM: ABC transporter
YP_003148543.1	PFAM: Predicted permease
YP_003148544.1	PFAM: ABC transporter
YP_003148545.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003148546.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_003148547.1	PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase
YP_003148548.1	PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit
YP_003148549.1	PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family
YP_003148550.1	PFAM: Prokaryotic transcription elongation factor, GreA/GreB, N-terminal domain; Prokaryotic transcription elongation factor, GreA/GreB, C-terminal domain; TIGRFAM: transcription elongation factor GreA
YP_003148552.1	PFAM: GlcNAc-PI de-N-acetylase; TIGRFAM: mycothiol conjugate amidase Mca
YP_003148554.1	PFAM:  undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase
YP_003148555.1	PFAM: PhoH-like protein
YP_003148557.1	PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: fumarate hydratase, class II
YP_003148558.1	catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis
YP_003148559.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
YP_003148560.1	PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase
YP_003148561.1	PFAM: Carbohydrate kinase; YjeF-related protein N-terminus; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related
YP_003148564.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA
YP_003148566.1	PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase
YP_003148567.1	PFAM: alpha/beta hydrolase fold
YP_003148568.1	PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: conserved hypothetical nucleotide-binding protein
YP_003148569.1	PFAM: Glycoprotease family
YP_003148570.1	PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase
YP_003148571.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
YP_003148573.1	PFAM: Glycosyl hydrolase family 3 N terminal domain
YP_003148574.1	PFAM: AcrB/AcrD/AcrF family
YP_003148575.1	TIGRFAM: alkylhydroperoxidase AhpD family core domain
YP_003148576.1	PFAM: Phospholipase D Active site motif
YP_003148577.1	PFAM: Chaperonin 10 Kd subunit
YP_003148578.1	PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL
YP_003148580.1	PFAM: Transcription factor WhiB
YP_003148581.1	PFAM: IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase
YP_003148582.1	PFAM: IMP dehydrogenase / GMP reductase domain; TIGRFAM: IMP dehydrogenase family protein
YP_003148584.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_003148585.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_003148586.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat
YP_003148589.1	PFAM: Glutamine amidotransferase class-I; tRNA methyl transferase; GMP synthase C terminal domain; TIGRFAM: GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
YP_003148590.1	PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein
YP_003148591.1	PFAM: NUDIX domain
YP_003148593.1	PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase PcrA
YP_003148594.1	catalyzes the interconversion of succinyl-CoA and succinate
YP_003148595.1	Catalyzes the only substrate-level phosphorylation in the TCA cycle
YP_003148596.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003148599.1	PFAM: PRC-barrel domain; Domain of unknown function (DUF2382); TIGRFAM: conserved domain
YP_003148600.1	PFAM: Type IV leader peptidase family
YP_003148601.1	PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent
YP_003148602.1	PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
YP_003148603.1	PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
YP_003148605.1	catalyzes the oxidation of malate to oxaloacetate
YP_003148606.1	PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase
YP_003148607.1	PFAM: 2',5' RNA ligase family
YP_003148608.1	PFAM: Glycosyl transferases group 1
YP_003148609.1	PFAM: Mannose-6-phosphate isomerase; Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
YP_003148610.1	PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2
YP_003148611.1	PFAM: Na+/H+ antiporter family
YP_003148612.1	PFAM: ABC transporter
YP_003148613.1	PFAM: Branched-chain amino acid transport system / permease component
YP_003148614.1	PFAM: Branched-chain amino acid transport system / permease component
YP_003148615.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric
YP_003148616.1	PFAM: Sodium:neurotransmitter symporter family
YP_003148618.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_003148619.1	PFAM: Bacterial regulatory hypothetical proteins, AraC family
YP_003148620.1	PFAM: Major Facilitator Superfamily
YP_003148621.1	PFAM: Bacterial regulatory protein, arsR family
YP_003148622.1	PFAM: Major Facilitator Superfamily
YP_003148623.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003148624.1	PFAM: TrwC relaxase; TIGRFAM: conjugative relaxase domain, TrwC/TraI family
YP_003148625.1	PFAM: Major Facilitator Superfamily
YP_003148626.1	PFAM: Bacterial regulatory protein, arsR family
YP_003148627.1	PFAM: Major Facilitator Superfamily
YP_003148628.1	PFAM: Integrase core domain
YP_003148629.1	PFAM: Transposase
YP_003148630.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003148631.1	PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; Pyrimidine nucleoside phosphorylase C-terminal domain; TIGRFAM: pyrimidine-nucleoside phosphorylase
YP_003148632.1	PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase
YP_003148635.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain
YP_003148636.1	PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleotide phosphorylase; inosine guanosine and xanthosine phosphorylase family
YP_003148637.1	catalyzes the reduction of nonspecific electron acceptors such as 2,6-dimethyl-1,4-benzoquinone and 5-hydroxy-1,4-naphthaquinone; does not have lipoamide dehydrogenase activity
YP_003148638.1	PFAM: Biotin carboxylase C-terminal domain; Biotin-requiring enzyme; Carbamoyl-phosphate synthase L chain, N-terminal domain; Carbamoyl-phosphate synthase L chain, ATP binding domain
YP_003148639.1	PFAM: pfkB family carbohydrate kinase
YP_003148640.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_003148641.1	PFAM: Carboxyl transferase domain
YP_003148642.1	PFAM: Siderophore-interacting protein; Siderophore-interacting FAD-binding domain
YP_003148643.1	PFAM: Maf-like protein; TIGRFAM: MAF protein
YP_003148644.1	PFAM: Cupin domain
YP_003148645.1	PFAM: Maf-like protein
YP_003148646.1	PFAM: ABC transporter
YP_003148647.1	PFAM: ABC transporter
YP_003148649.1	PFAM: Bacterial protein of unknown function (DUF885)
YP_003148650.1	PFAM: MOSC domain
YP_003148653.1	PFAM: Carboxyl transferase domain
YP_003148654.1	PFAM: Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region
YP_003148655.1	PFAM: Adenylate and Guanylate cyclase catalytic domain
YP_003148656.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_003148657.1	PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain
YP_003148658.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003148659.1	PFAM: GtrA-like protein
YP_003148660.1	PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein
YP_003148661.1	PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein
YP_003148663.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_003148664.1	PFAM: Branched-chain amino acid transport protein (AzlD)
YP_003148665.1	PFAM: AzlC protein
YP_003148666.1	PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain
YP_003148667.1	PFAM: Glycosyl transferase family 2
YP_003148668.1	PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit
YP_003148669.1	PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit
YP_003148670.1	TIGRFAM: conserved hypothetical protein TIGR03089
YP_003148672.1	PFAM: Transcription factor WhiB
YP_003148675.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain
YP_003148676.1	PFAM: Bacterial phospho-glucose isomerase C-terminal region; SIS domain
YP_003148677.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: mycothione reductase
YP_003148678.1	PFAM: Transcriptional regulatory protein, C terminal; Response regulator receiver domain
YP_003148679.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_003148680.1	PFAM: Lipoprotein LpqB beta-propeller domain; Sporulation and spore germination
YP_003148682.1	PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein
YP_003148683.1	PFAM: Protein of unknown function (DUF1006)
YP_003148684.1	PFAM: Acetyltransferase (GNAT) family
YP_003148685.1	PFAM: SecA DEAD-like domain; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit
YP_003148687.1	PFAM: LysM domain
YP_003148689.1	TIGRFAM: DNA binding domain, excisionase family
YP_003148690.1	PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB
YP_003148692.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 1
YP_003148693.1	PFAM: Protein of unknown function (DUF2505)
YP_003148695.1	PFAM: Bacterial NAD-glutamate dehydrogenase
YP_003148696.1	PFAM: PAS fold; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase
YP_003148697.1	PFAM: Transcription factor WhiB
YP_003148698.1	PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN)
YP_003148699.1	PFAM: Exonuclease
YP_003148703.1	PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)
YP_003148704.1	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence
YP_003148705.1	PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family
YP_003148706.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003148707.1	PFAM: Peptidase family S41
YP_003148708.1	PFAM: Acyl-CoA thioesterase; TIGRFAM: acyl-CoA thioesterase II
YP_003148711.1	PFAM: Phosphofructokinase; TIGRFAM: phosphofructokinase
YP_003148712.1	PFAM: Alpha amylase, catalytic domain
YP_003148713.1	PFAM: Bacterial-like globin
YP_003148714.1	PFAM: Mechanosensitive ion channel
YP_003148715.1	PFAM: Peptidase family M1; TIGRFAM: aminopeptidase N, Streptomyces lividans type
YP_003148717.1	PFAM: Ribose/Galactose Isomerase; TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family; ribose 5-phosphate isomerase
YP_003148719.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
YP_003148720.1	PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP
YP_003148721.1	PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP
YP_003148722.1	PFAM: ATPase family associated with various cellular activities (AAA); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX)
YP_003148724.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
YP_003148725.1	PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein
YP_003148726.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin)
YP_003148727.1	PFAM: Mur ligase middle domain; Mur ligase family, glutamate ligase domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase
YP_003148729.1	PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP
YP_003148730.1	PFAM: Nucleoside diphosphate kinase
YP_003148731.1	PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family
YP_003148732.1	PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC
YP_003148733.1	TIGRFAM: rod shape-determining protein MreD
YP_003148734.1	PFAM: Penicillin-binding Protein dimerisation domain; Penicillin binding protein transpeptidase domain; TIGRFAM: penicillin-binding protein 2
YP_003148735.1	PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle
YP_003148736.1	PFAM: KH domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; S1 RNA binding domain; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
YP_003148738.1	PFAM: Transposase, Mutator family
YP_003148740.1	with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA
YP_003148741.1	PFAM: Phenylacetic acid degradation B; TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit
YP_003148742.1	PFAM: Phenylacetic acid catabolic protein; TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit
YP_003148743.1	PFAM: Domain of unknown function DUF59; TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit
YP_003148744.1	PFAM: Oxidoreductase FAD-binding domain; 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit
YP_003148745.1	PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein; drug resistance transporter, EmrB/QacA subfamily
YP_003148746.1	PFAM: NUDIX domain; Dihydrofolate reductase
YP_003148748.1	PFAM: Methyltransferase domain
YP_003148749.1	PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase
YP_003148750.1	PFAM: RNA-metabolising metallo-beta-lactamase; Metallo-beta-lactamase superfamily; TIGRFAM: conserved hypothetical protein
YP_003148751.1	PFAM: Domain of unknown function DUF20
YP_003148752.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase
YP_003148753.1	PFAM: RNase H
YP_003148754.1	PFAM: Amidohydrolase family
YP_003148755.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_003148756.1	PFAM: Domain of unknown function DUF77; TIGRFAM: conserved hypothetical protein TIGR00106
YP_003148758.1	PFAM:  peptidoglycan binding domain
YP_003148759.1	PFAM: ABC transporter
YP_003148760.1	PFAM: Predicted permease
YP_003148762.1	PFAM: HNH endonuclease
YP_003148763.1	PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, C-terminal all-beta domain; Phosphotransferase enzyme family; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase
YP_003148764.1	PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase
YP_003148765.1	PFAM: Alpha amylase, catalytic domain
YP_003148768.1	PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: glycogen debranching enzyme GlgX
YP_003148770.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_003148771.1	PFAM: Electron transfer flavoprotein domain
YP_003148772.1	PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain
YP_003148773.1	PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family
YP_003148774.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_003148775.1	PFAM: Catalase; Catalase-related immune-responsive
YP_003148776.1	PFAM: Trp repressor protein; TIGRFAM: trp operon repressor, proteobacterial; TrpR-related protein YerC/YecD
YP_003148777.1	long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors
YP_003148778.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
YP_003148779.1	PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase
YP_003148780.1	catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate
YP_003148781.1	PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
YP_003148782.1	PFAM: DeoC/LacD family aldolase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
YP_003148783.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
YP_003148784.1	PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphatase
YP_003148785.1	PFAM: Aminotransferase class-V
YP_003148786.1	PFAM: HNH endonuclease
YP_003148787.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_003148788.1	PFAM: Aldehyde dehydrogenase family
YP_003148789.1	PFAM: NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; Helix-hairpin-helix motif; TIGRFAM: DNA ligase, NAD-dependent
YP_003148790.1	PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin-like protein
YP_003148792.1	PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit
YP_003148793.1	PFAM: Amidase; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit
YP_003148794.1	PFAM: GatB domain; PET112 family, N terminal region; PET112 family, C terminal region; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit
YP_003148796.1	PFAM: Sortase family; TIGRFAM: LPXTG-site transpeptidase (sortase) family protein
YP_003148797.1	PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA
YP_003148798.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
YP_003148799.1	PFAM: Acetohydroxy acid isomeroreductase, catalytic domain
YP_003148800.1	PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II
YP_003148802.1	PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family
YP_003148803.1	PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase
YP_003148805.1	PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein
YP_003148806.1	PFAM: 3' exoribonuclease family, domain 2; 3' exoribonuclease family, domain 1; TIGRFAM: ribonuclease PH
YP_003148807.1	PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
YP_003148809.1	PFAM: Aminotransferase class I and II
YP_003148811.1	PFAM: Endonuclease/Exonuclease/phosphatase family
YP_003148813.1	PFAM: AhpC/TSA family
YP_003148816.1	catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine
YP_003148819.1	PFAM: Nucleotidyltransferase domain
YP_003148820.1	catalyzes the formation of arginine from (N-L-arginino)succinate
YP_003148821.1	catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis
YP_003148822.1	PFAM: Arginine repressor, DNA binding domain; Arginine repressor, C-terminal domain; TIGRFAM: arginine repressor
YP_003148823.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase
YP_003148824.1	PFAM: Antibiotic biosynthesis monooxygenase
YP_003148825.1	catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent
YP_003148826.1	PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth)
YP_003148827.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase
YP_003148828.1	PFAM: CoA-transferase family III
YP_003148829.1	PFAM: Citrate transporter
YP_003148830.1	PFAM: Aldehyde dehydrogenase family
YP_003148833.1	PFAM: PIN domain
YP_003148834.1	PFAM: Uncharacterized protein family UPF0016
YP_003148841.1	PFAM: short chain dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase
YP_003148842.1	PFAM: Type II/IV secretion system protein
YP_003148843.1	PFAM: Bacterial type II secretion system protein F domain
YP_003148844.1	PFAM: Bacterial type II secretion system protein F domain
YP_003148849.1	PFAM: Beta-lactamase
YP_003148850.1	PFAM: Beta-lactamase
YP_003148851.1	PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2
YP_003148853.1	PFAM: ABC transporter
YP_003148855.1	PFAM: SmpB protein; TIGRFAM: SsrA-binding protein
YP_003148856.1	PFAM: Thioredoxin
YP_003148857.1	PFAM: Malic enzyme, N-terminal domain; Malic enzyme, NAD binding domain
YP_003148858.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_003148861.1	PFAM: Type III restriction enzyme, res subunit
YP_003148862.1	PFAM: DNA polymerase family A
YP_003148863.1	PFAM: AsnC family
YP_003148864.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase
YP_003148867.1	PFAM: Uncharacterised BCR, COG1937
YP_003148868.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; Heavy-metal-associated domain; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase
YP_003148870.1	PFAM: Heavy-metal-associated domain
YP_003148872.1	PFAM: Fumarylacetoacetate (FAA) hydrolase family; Domain of unknown function (DUF1969); TIGRFAM: fumarylacetoacetase
YP_003148874.1	PFAM: homogentisate 1,2-dioxygenase; TIGRFAM: homogentisate 1,2-dioxygenase
YP_003148875.1	PFAM: Acyltransferase family
YP_003148877.1	PFAM: Isochorismatase family
YP_003148878.1	PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM:  nicotinate phosphoribosyltransferase
YP_003148879.1	PFAM: ATP-dependent Clp protease adaptor protein ClpS
YP_003148881.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_003148882.1	PFAM: Bacterial DNA-binding protein
YP_003148883.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
YP_003148884.1	PFAM: D-ala D-ala ligase N-terminus; ATP-grasp domain; TIGRFAM: D-alanine--D-alanine ligase
YP_003148886.1	PFAM: AIR synthase related protein, N-terminal domain; TIGRFAM: thiamine-monophosphate kinase
YP_003148887.1	PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28
YP_003148888.1	PFAM: DAK2 domain
YP_003148889.1	PFAM: OB-fold nucleic acid binding domain; Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG
YP_003148890.1	PFAM: Conserved hypothetical protein 95; TIGRFAM:  methyltransferase
YP_003148891.1	PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain
YP_003148892.1	PFAM: Uncharacterized ACR, COG1399
YP_003148893.1	PFAM: Double-stranded RNA binding motif; RNase3 domain; TIGRFAM: ribonuclease III, bacterial
YP_003148894.1	PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg)
YP_003148896.1	PFAM: GlcNAc-PI de-N-acetylase
YP_003148898.1	PFAM: Acylphosphatase
YP_003148899.1	PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: chromosome segregation protein SMC, common bacterial type
YP_003148901.1	PFAM: SRP54-type protein, helical bundle domain; SRP54-type protein, GTPase domain; TIGRFAM: signal recognition particle-docking protein FtsY
YP_003148902.1	PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD)
YP_003148903.1	PFAM: SRP54-type protein, GTPase domain; Signal peptide binding domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle protein
YP_003148904.1	catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde
YP_003148905.1	PFAM: Creatinase/Prolidase N-terminal domain; metallopeptidase family M24
YP_003148906.1	PFAM: Aldehyde dehydrogenase family
YP_003148907.1	PFAM: Amidohydrolase family
YP_003148909.1	PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16
YP_003148911.1	PFAM: RimM N-terminal domain; PRC-barrel domain; TIGRFAM: 16S rRNA processing protein RimM
YP_003148912.1	PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase
YP_003148913.1	PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein
YP_003148914.1	PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type
YP_003148915.1	PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type
YP_003148916.1	PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type
YP_003148917.1	PFAM: Ribonuclease HII
YP_003148918.1	PFAM: Protein of unknown function (DUF2469)
YP_003148919.1	PFAM: Uncharacterised protein family UPF0102
YP_003148920.1	PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein
YP_003148921.1	PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA
YP_003148922.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_003148923.1	PFAM: Peptidase family M23
YP_003148924.1	PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type
YP_003148925.1	PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts
YP_003148926.1	PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase
YP_003148927.1	PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor
YP_003148928.1	PFAM: Cytidylyltransferase family
YP_003148929.1	23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance
YP_003148931.1	PFAM: DRTGG domain; Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase
YP_003148932.1	PFAM: Acetokinase family; TIGRFAM: acetate kinase
YP_003148933.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase
YP_003148934.1	PFAM: Glycosyl hydrolases family 25
YP_003148935.1	PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
YP_003148936.1	PFAM: Peptidase family M50; TIGRFAM: RIP metalloprotease RseP
YP_003148937.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
YP_003148939.1	PFAM: ABC transporter
YP_003148940.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_003148941.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_003148943.1	PFAM: Acetyltransferase (GNAT) family
YP_003148944.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: gluconate kinase, FGGY type
YP_003148945.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_003148946.1	PFAM: Domain of unknown function DUF81
YP_003148947.1	PFAM: Bacterial capsule synthesis protein PGA_cap
YP_003148948.1	PFAM: Bacterial capsule synthesis protein PGA_cap
YP_003148950.1	PFAM: Uncharacterised BCR, YhbC family COG0779
YP_003148951.1	PFAM: NusA N-terminal domain; TIGRFAM: transcription termination factor NusA
YP_003148952.1	PFAM: Protein of unknown function (DUF448)
YP_003148953.1	PFAM: Elongation factor Tu GTP binding domain; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu domain 2; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2
YP_003148954.1	PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A
YP_003148955.1	PFAM: DKCLD (NUC011) domain; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
YP_003148956.1	PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase
YP_003148957.1	PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA
YP_003148958.1	PFAM: S1 RNA binding domain; Ribonuclease E/G family; TIGRFAM: ribonuclease, Rne/Rng family
YP_003148959.1	PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21
YP_003148960.1	PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27
YP_003148961.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
YP_003148963.1	PFAM: Cytidylyltransferase; TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase
YP_003148964.1	PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-related protein
YP_003148965.1	PFAM: CsbD-like
YP_003148966.1	PFAM: Elongation factor G C-terminus; GTP-binding protein LepA C-terminus; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; GTP-binding protein LepA
YP_003148967.1	PFAM:  methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase
YP_003148968.1	PFAM: Acetyltransferase (GNAT) family
YP_003148969.1	PFAM: HemN C-terminal region; Radical SAM superfamily; TIGRFAM:  oxygen-independent coproporphyrinogen III oxidase
YP_003148973.1	PFAM: HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA
YP_003148974.1	PFAM: DnaJ domain; DnaJ central domain (4 repeats); DnaJ C terminal region; TIGRFAM: chaperone protein DnaJ
YP_003148975.1	PFAM: RNA methyltransferase; TIGRFAM: conserved hypothetical protein TIGR00046
YP_003148976.1	PFAM: HIT domain
YP_003148977.1	PFAM: PhoH-like protein
YP_003148978.1	PFAM: Uncharacterized protein family UPF0054; TIGRFAM: conserved hypothetical protein TIGR00043
YP_003148979.1	PFAM: CBS domain pair; Domain of unknown function DUF21; Transporter associated domain
YP_003148980.1	PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding conserved hypothetical protein; small GTP-binding protein domain; GTP-binding protein Era
YP_003148982.1	PFAM: Recombination protein O; TIGRFAM: DNA repair protein RecO
YP_003148983.1	PFAM:  undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase
YP_003148984.1	PFAM: Ferric uptake regulator family
YP_003148985.1	PFAM: ABC 3 transport family
YP_003148986.1	PFAM: ABC transporter
YP_003148987.1	PFAM: Periplasmic solute binding protein family
YP_003148988.1	Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_003148989.1	PFAM: LysE type translocator
YP_003148990.1	PFAM: Bacterial regulatory hypothetical protein, lysR family; LysR substrate binding domain; TIGRFAM: transcriptional regulator, ArgP family
YP_003148991.1	PFAM: Dihydrouridine synthase (Dus); TIGRFAM:  TIM-barrel protein, nifR3 family
YP_003148992.1	PFAM: Rhodanese-like domain
YP_003148993.1	PFAM: Aldo/keto reductase family
YP_003148995.1	PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; deoxyguanosinetriphosphate triphosphohydrolase
YP_003148996.1	PFAM: Toprim domain; DnaB-helicase binding domain of primase; CHC2 zinc finger; DNA primase catalytic core, N-terminal domain; TIGRFAM: DNA primase, catalytic core
YP_003148997.1	PFAM: Glycosyl transferases group 1
YP_003149001.1	PFAM: Carboxyl transferase domain
YP_003149002.1	PFAM: Beta-ketoacyl synthase, C-terminal domain; Beta-ketoacyl synthase, N-terminal domain; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2
YP_003149003.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_003149004.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_003149005.1	PFAM: Biotin-requiring enzyme; Acyl transferase domain
YP_003149007.1	PFAM: Glycerophosphoryl diester phosphodiesterase family
YP_003149008.1	E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC
YP_003149010.1	PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: conserved hypothetical protein TIGR00486
YP_003149011.1	PFAM: Phosphoglycerate mutase family
YP_003149012.1	PFAM: Protein of unknown function (DUF328)
YP_003149013.1	PFAM: RNB domain
YP_003149014.1	PFAM: Excalibur calcium-binding domain
YP_003149015.1	PFAM: ROK family
YP_003149016.1	PFAM: metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I
YP_003149018.1	PFAM: Peptidase family M20/M25/M40
YP_003149020.1	PFAM:  cell wall binding repeat 2; Immune inhibitor A peptidase M6; TIGRFAM: M6 family metalloprotease domain
YP_003149021.1	PFAM: Glutamine synthetase, beta-Grasp domain; Glutamine synthetase, catalytic domain; TIGRFAM: glutamine synthetase, type I
YP_003149022.1	catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme
YP_003149024.1	PFAM: Histidine biosynthesis protein
YP_003149025.1	PFAM: Translation initiation factor IF-3, N-terminal domain; Translation initiation factor IF-3, C-terminal domain; TIGRFAM: translation initiation factor IF-3
YP_003149026.1	PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35
YP_003149027.1	PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20
YP_003149028.1	PFAM: SpoU rRNA Methylase family
YP_003149029.1	PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit
YP_003149030.1	PFAM:  tRNA binding domain; Ferredoxin-fold anticodon binding domain; tRNA synthetase B5 domain; B3/4 domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial
YP_003149031.1	PFAM: short chain dehydrogenase
YP_003149033.1	PFAM: tRNA synthetases class I (W and Y); S4 domain; TIGRFAM: tyrosyl-tRNA synthetase
YP_003149034.1	PFAM: FtsJ-like methyltransferase; S4 domain; TIGRFAM: hemolysin TlyA family protein
YP_003149035.1	PFAM: ATP-NAD kinase
YP_003149036.1	PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN
YP_003149037.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_003149038.1	PFAM: NUDIX domain
YP_003149039.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
YP_003149040.1	PFAM: Acetyltransferase (GNAT) family
YP_003149042.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_003149043.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003149044.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_003149045.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003149046.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_003149047.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_003149048.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_003149049.1	PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: conserved hypothetical protein TIGR00250
YP_003149050.1	PFAM: Aminodeoxychorismate lyase; TIGRFAM: conserved hypothetical protein TIGR00247
YP_003149051.1	PFAM: Shikimate dehydrogenase substrate binding domain
YP_003149052.1	PFAM: Chorismate synthase; TIGRFAM: chorismate synthase
YP_003149053.1	PFAM: 3-dehydroquinate synthase; Shikimate kinase; TIGRFAM: 3-dehydroquinate synthase
YP_003149054.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_003149055.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_003149056.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003149057.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003149058.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_003149059.1	PFAM: Conserved region in glutamate synthase
YP_003149060.1	PFAM: Elongation factor P (EF-P) OB domain; Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; TIGRFAM: translation elongation factor P
YP_003149061.1	PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB
YP_003149062.1	PFAM: Phosphoribosyl transferase domain
YP_003149063.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase
YP_003149064.1	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis
YP_003149065.1	PFAM: Glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain, CPSase domain; TIGRFAM: carbamoyl-phosphate synthase, small subunit
YP_003149066.1	PFAM: MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit
YP_003149067.1	PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2
YP_003149069.1	PFAM: Guanylate kinase; TIGRFAM: guanylate kinase
YP_003149070.1	PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit
YP_003149071.1	PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic
YP_003149072.1	PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, N-terminal domain; S-adenosylmethionine synthetase, central domain; TIGRFAM: S-adenosylmethionine synthetase
YP_003149073.1	TIGRFAM: primosomal protein N'
YP_003149074.1	PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase
YP_003149075.1	PFAM: NusB family; NOL1/NOP2/sun family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB
YP_003149076.1	PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase
YP_003149077.1	PFAM: Protein of unknown function (DUF2581)
YP_003149080.1	TIGRFAM: uncharacterized Actinobacterial protein TIGR03083; conserved hypothetical protein TIGR03085
YP_003149081.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_003149082.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_003149083.1	PFAM: Tryptophan-associated transmembrane protein (Trp_oprn_chp); TIGRFAM: trp region conserved hypothetical membrane protein
YP_003149085.1	PFAM: Indole-3-glycerol phosphate synthase
YP_003149086.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_003149087.1	PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit
YP_003149089.1	PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase
YP_003149090.1	PFAM: Pyruvate kinase, alpha/beta domain; Pyruvate kinase, barrel domain; TIGRFAM: pyruvate kinase
YP_003149091.1	PFAM: Response regulator receiver domain; ANTAR domain
YP_003149092.1	PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1
YP_003149093.1	PFAM: 5'-3' exonuclease, C-terminal SAM fold; DNA polymerase family A; 5'-3' exonuclease, N-terminal resolvase-like domain; TIGRFAM: DNA polymerase I
YP_003149094.1	catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate
YP_003149095.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
YP_003149096.1	PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase
YP_003149097.1	PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport
YP_003149098.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_003149099.1	PFAM: Integral membrane protein TerC family
YP_003149100.1	PFAM: Integral membrane protein DUF6
YP_003149101.1	PFAM: Glycosyl hydrolases family 15
YP_003149102.1	PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit
YP_003149103.1	PFAM: UvrB/uvrC motif; Helix-hairpin-helix motif; GIY-YIG catalytic domain; UvrC Helix-hairpin-helix N-terminal; TIGRFAM: excinuclease ABC, C subunit
YP_003149104.1	PFAM: P-loop ATPase protein family
YP_003149105.1	PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related
YP_003149106.1	PFAM: Sporulation Regulator WhiA C terminal domain; Sporulation Regulator WhiA N terminal; TIGRFAM: conserved hypothetical protein
YP_003149107.1	PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I
YP_003149108.1	PFAM: Phosphoglycerate kinase
YP_003149109.1	PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase
YP_003149110.1	PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit
YP_003149112.1	TIGRFAM: 6-phosphogluconolactonase
YP_003149113.1	PFAM: Glucose-6-phosphate dehydrogenase subunit; TIGRFAM: opcA protein
YP_003149114.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_003149115.1	PFAM: Phosphoglucose isomerase
YP_003149116.1	PFAM: Transaldolase; TIGRFAM: transaldolase, mycobacterial type
YP_003149117.1	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase
YP_003149118.1	PFAM: UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase
YP_003149120.1	PFAM: ABC transporter
YP_003149124.1	PFAM: Cytochrome oxidase assembly protein
YP_003149125.1	PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family
YP_003149126.1	PFAM: ABC transporter
YP_003149128.1	PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB
YP_003149129.1	PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD, group 1
YP_003149130.1	PFAM: Rieske [2Fe-2S] domain
YP_003149131.1	PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC
YP_003149132.1	PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily
YP_003149133.1	PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family
YP_003149134.1	PFAM: Domain of unknown function DUF59
YP_003149135.1	PFAM: Sodium:dicarboxylate symporter family
YP_003149136.1	PFAM:  neutral zinc metallopeptidase
YP_003149137.1	PFAM: Major Facilitator Superfamily
YP_003149140.1	PFAM: ABC transporter
YP_003149144.1	PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase
YP_003149145.1	Catalyzes a key regulatory step in fatty acid biosynthesis
YP_003149146.1	PFAM: Mur ligase middle domain
YP_003149147.1	PFAM: Mur ligase family, glutamate ligase domain; RimK-like ATP-grasp domain; Mur ligase middle domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; cyanophycin synthetase
YP_003149148.1	PFAM: Peptidase family S51; TIGRFAM: cyanophycinase
YP_003149150.1	PFAM: ABC transporter
YP_003149151.1	PFAM: Domain of unknown function DUF81
YP_003149152.1	PFAM: SpoU rRNA Methylase family
YP_003149155.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_003149156.1	PFAM: Sigma-70 region 2; Sigma-70 region 3; Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003149157.1	PFAM: impB/mucB/samB family
YP_003149158.1	PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase
YP_003149160.1	PFAM: N-6 DNA Methylase
YP_003149162.1	PFAM: Type III restriction enzyme, res subunit; Type I restriction enzyme R protein N terminus (HSDR_N)
YP_003149168.1	PFAM: Caspase domain
YP_003149171.1	PFAM: NUDIX domain; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1
YP_003149172.1	UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin
YP_003149173.1	TIGRFAM: lycopene cyclase domain
YP_003149174.1	TIGRFAM: lycopene cyclase domain
YP_003149175.1	PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase
YP_003149176.1	PFAM: Squalene/phytoene synthase
YP_003149177.1	PFAM: Peptidase family M20/M25/M40
YP_003149180.1	PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA)
YP_003149181.1	PFAM: tRNA synthetases class I (C) catalytic domain; TIGRFAM: cysteinyl-tRNA synthetase; cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase
YP_003149182.1	PFAM: Protein of unknown function DUF75
YP_003149183.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
YP_003149184.1	PFAM: NUDIX domain
YP_003149186.1	PFAM: Peptidase family M50
YP_003149187.1	PFAM: Methyltransferase domain
YP_003149189.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase
YP_003149190.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase
YP_003149193.1	PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family
YP_003149194.1	PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC
YP_003149195.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DSHCT (NUC185) domain
YP_003149196.1	PFAM: 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, C-terminal SAM fold
YP_003149197.1	PFAM: MarR family; AsnC family
YP_003149198.1	PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein
YP_003149199.1	PFAM: Amidohydrolase family
YP_003149200.1	PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase
YP_003149201.1	PFAM: Glycosyl transferase family 2
YP_003149202.1	PFAM: FxsA cytoplasmic membrane protein
YP_003149204.1	PFAM: Domain of unknown function DUF20
YP_003149205.1	PFAM: Bacterial capsule synthesis protein PGA_cap
YP_003149206.1	PFAM: Diacylglycerol kinase catalytic domain; Uncharacterized conserved protein (DUF2183)
YP_003149208.1	PFAM: Acetyltransferase (GNAT) family
YP_003149211.1	PFAM: FAD dependent oxidoreductase
YP_003149212.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003149213.1	PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: conserved hypothetical protein TIGR01777
YP_003149214.1	PFAM: Phosphotransferase enzyme family
YP_003149215.1	PFAM: Region found in RelA / SpoT proteins
YP_003149216.1	PFAM: Ribonuclease BN-like family
YP_003149217.1	PFAM: ABC transporter
YP_003149219.1	PFAM: Major Facilitator Superfamily
YP_003149220.1	PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase
YP_003149221.1	PFAM: HNH endonuclease
YP_003149222.1	PFAM: Major Facilitator Superfamily
YP_003149223.1	PFAM: Methyltransferase domain
YP_003149224.1	PFAM: GlcNAc-PI de-N-acetylase
YP_003149225.1	PFAM: YCII-related domain
YP_003149226.1	PFAM: O-methyltransferase
YP_003149229.1	PFAM: Phosphotransferase enzyme family
YP_003149234.1	PFAM: NIPSNAP
YP_003149235.1	PFAM: Transposase, Mutator family
YP_003149236.1	PFAM: Acetyltransferase (GNAT) family
YP_003149237.1	PFAM: Phosphotransferase enzyme family
YP_003149239.1	PFAM: Inositol monophosphatase family
YP_003149241.1	PFAM: Protein of unknown function (DUF1470)
YP_003149242.1	PFAM: LysE type translocator
YP_003149243.1	PFAM: B3/4 domain
YP_003149244.1	PFAM: Acetyltransferase (GNAT) family
YP_003149247.1	PFAM: NUDIX domain
YP_003149248.1	PFAM: RF-1 domain
YP_003149249.1	PFAM: GlcNAc-PI de-N-acetylase
YP_003149250.1	PFAM:  cell wall binding repeat 2
YP_003149251.1	PFAM: Aminotransferase class I and II
YP_003149252.1	PFAM: Branched-chain amino acid transport protein; TIGRFAM: branched-chain amino acid uptake carrier
YP_003149253.1	PFAM: Major Facilitator Superfamily
YP_003149254.1	PFAM: Uncharacterised BCR, YnfA/UPF0060 family
YP_003149255.1	converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer
YP_003149256.1	PFAM: Cation efflux family
YP_003149257.1	PFAM: Bacterial regulatory protein, arsR family
YP_003149258.1	PFAM: Uncharacterised ACR, COG2135
YP_003149260.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_003149261.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003149262.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_003149263.1	PFAM: alpha/beta hydrolase fold
YP_003149264.1	Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group
YP_003149265.1	RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA
YP_003149266.1	PFAM: Nucleotidyl transferase
YP_003149269.1	PFAM: Major Facilitator Superfamily
YP_003149271.1	PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain
YP_003149272.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase
YP_003149273.1	PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase
YP_003149274.1	PFAM: Aldehyde dehydrogenase family
YP_003149275.1	PFAM: D-arabinono-1,4-lactone oxidase
YP_003149276.1	PFAM: FAD binding domain
YP_003149277.1	PFAM: Aldo/keto reductase family
YP_003149278.1	PFAM: Amino acid permease
YP_003149279.1	PFAM: OsmC-like protein
YP_003149280.1	PFAM: Phosphoglycerate mutase family
YP_003149282.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
YP_003149284.1	PFAM: MerR family regulatory protein
YP_003149285.1	PFAM: FHA domain
YP_003149286.1	PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein
YP_003149287.1	PFAM: Bacterial protein of unknown function (DUF881)
YP_003149288.1	PFAM: Protein of unknown function (DUF1290)
YP_003149289.1	PFAM: Bacterial protein of unknown function (DUF881)
YP_003149290.1	PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD
YP_003149291.1	PFAM: Thioesterase superfamily
YP_003149292.1	PFAM: 4'-phosphopantetheinyl transferase superfamily
YP_003149293.1	PFAM: Peptidase family M1
YP_003149294.1	PFAM: AMP-binding enzyme; TIGRFAM: non-ribosomal peptide synthetase terminal domain of unknown function; amino acid adenylation domain
YP_003149295.1	PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein
YP_003149296.1	PFAM: T5orf172 domain
YP_003149297.1	PFAM: Transposase
YP_003149298.1	PFAM: Integrase core domain
YP_003149299.1	PFAM: Integrase core domain
YP_003149300.1	PFAM: Transposase
YP_003149302.1	PFAM: GTPase of unknown function; TIGRFAM: GTP-binding conserved hypothetical protein; small GTP-binding protein domain; GTP-binding protein Era
YP_003149303.1	PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase
YP_003149304.1	PFAM: S4 domain; RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase family
YP_003149305.1	PFAM:  transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B
YP_003149306.1	PFAM: ScpA/B protein
YP_003149307.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_003149308.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs
YP_003149310.1	PFAM: Metallo-beta-lactamase superfamily
YP_003149311.1	PFAM: Domain of Unknown Function (DUF349)
YP_003149312.1	catalyzes the removal of amino acids from the N termini of peptides
YP_003149313.1	PFAM: HD domain; Region found in RelA / SpoT proteins; TGS domain; ACT domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family
YP_003149314.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase
YP_003149315.1	PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF
YP_003149316.1	PFAM: Protein export membrane protein; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family
YP_003149317.1	PFAM: Holliday junction DNA helicase ruvB N-terminus; Holliday junction DNA helicase ruvB C-terminus; ATPase family associated with various cellular activities (AAA); TIGRFAM: Holliday junction DNA helicase, RuvB subunit
YP_003149318.1	PFAM: RuvA N terminal domain; RuvA, C-terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit
YP_003149319.1	PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC
YP_003149320.1	PFAM: Domain of unknown function DUF28; TIGRFAM: conserved hypothetical protein TIGR01033
YP_003149321.1	PFAM: SNO glutamine amidotransferase family
YP_003149322.1	with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate
YP_003149324.1	PFAM: Glycosyl transferases group 1
YP_003149325.1	PFAM: CDP-alcohol phosphatidyltransferase
YP_003149326.1	PFAM: Transglycosylase associated protein
YP_003149327.1	PFAM: Protein similar to CwfJ C-terminus 1
YP_003149328.1	PFAM: NlpC/P60 family
YP_003149329.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
YP_003149330.1	PFAM:  transmembrane protein (PGPGW); TIGRFAM: conserved hypothetical protein TIGR02611
YP_003149331.1	PFAM: Aminotransferase class IV
YP_003149333.1	PFAM: Protein of unknown function DUF72
YP_003149334.1	PFAM: Uncharacterized ACR, YdiU/UPF0061 family
YP_003149335.1	PFAM: Aldo/keto reductase family
YP_003149336.1	PFAM: Polyphosphate kinase 2
YP_003149337.1	PFAM: RibD C-terminal domain
YP_003149338.1	PFAM: alpha/beta hydrolase fold
YP_003149339.1	PFAM: FGGY family of carbohydrate kinases, C-terminal domain; FGGY family of carbohydrate kinases, N-terminal domain; TIGRFAM: glycerol kinase
YP_003149340.1	catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth
YP_003149342.1	PFAM: Eukaryotic and archaeal DNA primase small subunit; TIGRFAM: DNA polymerase LigD, polymerase domain
YP_003149343.1	PFAM: Endonuclease/Exonuclease/phosphatase family
YP_003149344.1	PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase
YP_003149345.1	PFAM: Chlorite dismutase
YP_003149346.1	PFAM: Flavin containing amine oxidoreductase; TIGRFAM: protoporphyrinogen oxidase
YP_003149347.1	PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase
YP_003149349.1	PFAM: HRDC domain; 3'-5' exonuclease; TIGRFAM: ribonuclease D
YP_003149350.1	PFAM: Helix-turn-helix; EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_003149351.1	PFAM: Glycerophosphoryl diester phosphodiesterase family
YP_003149352.1	PFAM: Transketolase, pyrimidine binding domain; Transketolase, C-terminal domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase
YP_003149354.1	PFAM: Acyltransferase family
YP_003149355.1	PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1
YP_003149356.1	PFAM: tRNA (Uracil-5-)-methyltransferase; TRAM domain
YP_003149359.1	PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut)
YP_003149361.1	PFAM: Inositol monophosphatase family
YP_003149362.1	PFAM: Ferrochelatase
YP_003149363.1	PFAM: UPF0126 domain
YP_003149365.1	catalyzes the formation of thymidine 5'-phosphate from thymidine
YP_003149366.1	PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase
YP_003149368.1	PFAM: CoA binding domain; Acetyltransferase (GNAT) family
YP_003149369.1	PFAM: AMP-binding enzyme
YP_003149370.1	PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller
YP_003149372.1	PFAM: ABC transporter
YP_003149376.1	PFAM: Short chain fatty acid transporter; TIGRFAM: conserved hypothetical integral membrane protein
YP_003149377.1	PFAM: Staphylococcal nuclease homologue
YP_003149378.1	PFAM: Amino acid permease
YP_003149379.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_003149380.1	PFAM: Protein of unknown function (DUF456)
YP_003149383.1	PFAM: impB/mucB/samB family
YP_003149384.1	PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc)
YP_003149387.1	PFAM: Polyprenyl synthetase
YP_003149389.1	PFAM: Class-II DAHP synthetase family; TIGRFAM: 3-deoxy-7-phosphoheptulonate synthase, class II
YP_003149390.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_003149391.1	PFAM: alpha/beta hydrolase fold
YP_003149392.1	PFAM: ROK family; TIGRFAM: ROK family protein ( glucokinase)
YP_003149395.1	contains 3'-5'exonuclease domain
YP_003149396.1	PFAM: AsnC family
YP_003149397.1	PFAM: Glycosyl transferase family, helical bundle domain; Glycosyl transferase family, a/b domain; TIGRFAM: anthranilate phosphoribosyltransferase
YP_003149398.1	PFAM: Cytochrome c oxidase subunit III
YP_003149399.1	PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III
YP_003149400.1	PFAM: Rieske [2Fe-2S] domain
YP_003149401.1	PFAM: Cytochrome b(N-terminal)/b6/petB
YP_003149402.1	PFAM: Domain of unknown function (DUF1025)
YP_003149404.1	PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, subunit I
YP_003149405.1	PFAM: Cytochrome C oxidase subunit II, periplasmic domain; TIGRFAM: cytochrome c oxidase, subunit II
YP_003149406.1	PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase
YP_003149407.1	PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein
YP_003149408.1	PFAM: Peptidase family M20/M25/M40
YP_003149411.1	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein
YP_003149412.1	PFAM: Cytosol aminopeptidase family, N-terminal domain; Cytosol aminopeptidase family, catalytic domain
YP_003149414.1	E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_003149415.1	PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component)
YP_003149417.1	PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B
YP_003149418.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_003149420.1	PFAM: RDD family
YP_003149421.1	PFAM: Glutamine synthetase, beta-Grasp domain; Glutamine synthetase, catalytic domain; TIGRFAM: glutamine synthetase, type I
YP_003149423.1	PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family
YP_003149425.1	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase
YP_003149426.1	PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family
YP_003149427.1	PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase
YP_003149428.1	PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA
YP_003149429.1	PFAM: DivIVA protein
YP_003149430.1	PFAM: YGGT family
YP_003149431.1	PFAM: Protein of unknown function (DUF552)
YP_003149432.1	PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family
YP_003149433.1	PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: conserved hypothetical protein TIGR00726
YP_003149434.1	PFAM: Tubulin/FtsZ family, C-terminal domain; Tubulin/FtsZ family, GTPase domain; TIGRFAM: cell division protein FtsZ
YP_003149436.1	PFAM: Mur ligase middle domain; Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase
YP_003149437.1	PFAM: Glycosyltransferase family 28 C-terminal domain; Glycosyltransferase family 28 N-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
YP_003149438.1	PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW
YP_003149439.1	PFAM: Mur ligase middle domain; FAD dependent oxidoreductase; Mur ligase family, glutamate ligase domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase
YP_003149440.1	PFAM: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase
YP_003149441.1	PFAM: Mur ligase family, catalytic domain; Mur ligase middle domain; Mur ligase family, glutamate ligase domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
YP_003149442.1	PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain
YP_003149444.1	PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW
YP_003149445.1	PFAM: MraZ protein; TIGRFAM: mraZ protein
YP_003149446.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_003149447.1	PFAM: Protein of unknown function DUF58
YP_003149448.1	PFAM: Transglutaminase-like superfamily
YP_003149449.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain
YP_003149450.1	PFAM: Universal stress protein family
YP_003149453.1	PFAM: Protein of unknown function DUF75
YP_003149454.1	PFAM: Domain of unknown function (DUF1605); Helicase associated domain (HA2); Helicase conserved C-terminal domain; TIGRFAM: ATP-dependent helicase HrpA
YP_003149455.1	PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit
YP_003149457.1	PFAM: Na+/H+ ion antiporter subunit
YP_003149458.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_003149459.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_003149460.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; Domain related to MnhB subunit of Na+/H+ antiporter
YP_003149461.1	PFAM: Protein of unknown function (DUF445)
YP_003149462.1	PFAM: AMP-binding enzyme
YP_003149464.1	PFAM: Serine dehydratase beta chain; Serine dehydratase alpha chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form
YP_003149466.1	PFAM: PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase
YP_003149467.1	PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family
YP_003149469.1	PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase
YP_003149470.1	PFAM: Phosphotransferase system, EIIC
YP_003149472.1	PFAM: SIS domain
YP_003149473.1	PFAM: phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component
YP_003149474.1	PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; TIGRFAM: PTS system, glucose subfamily, IIA component
YP_003149477.1	PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family
YP_003149478.1	PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family
YP_003149479.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003149480.1	PFAM: ABC transporter
YP_003149485.1	PFAM: Pregnancy-associated plasma protein-A
YP_003149486.1	PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit
YP_003149487.1	PFAM: Transposase
YP_003149488.1	PFAM: Integrase core domain
YP_003149489.1	PFAM: Transposase
YP_003149490.1	PFAM: Thioesterase superfamily; TIGRFAM: conserved hypothetical protein TIGR00051
YP_003149492.1	PFAM: Zinc-binding dehydrogenase
YP_003149494.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003149495.1	catalyzes the reduction of ribonucleotides to deoxyribonucleotides; the rate-limiting step in dNTP synthesis
YP_003149496.1	PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR
YP_003149498.1	PFAM: Cutinase
YP_003149500.1	PFAM: LysM domain
YP_003149501.1	PFAM: Peptidase S24-like; LexA DNA binding domain; TIGRFAM: SOS regulatory protein LexA
YP_003149502.1	PFAM: Sir2 family
YP_003149503.1	PFAM: Patatin-like phospholipase
YP_003149504.1	PFAM: Aminotransferase class-V
YP_003149505.1	PFAM: LysR substrate binding domain; Bacterial regulatory hypothetical protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain
YP_003149506.1	TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003149510.1	PFAM: Metallo-beta-lactamase superfamily; Competence protein; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein
YP_003149511.1	PFAM: Helix-hairpin-helix motif; SLBB domain; TIGRFAM: comEA protein; competence protein ComEA helix-hairpin-helix repeat region
YP_003149512.1	PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: degV family protein
YP_003149513.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
YP_003149515.1	PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20
YP_003149516.1	PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit
YP_003149523.1	PFAM: Cobalt transport protein
YP_003149524.1	PFAM: ABC transporter
YP_003149526.1	PFAM: GTPase of unknown function; TIGRFAM: small GTP-binding protein domain; GTP-binding conserved hypothetical protein; GTP-binding proten HflX
YP_003149527.1	PFAM: D-alanyl-D-alanine carboxypeptidase
YP_003149528.1	PFAM: PhoD-like phosphatase
YP_003149529.1	PFAM: Methyltransferase small domain
YP_003149531.1	PFAM: IPP transferase; TIGRFAM: tRNA isopentenyltransferase (miaA)
YP_003149532.1	PFAM: Domain of unknown function (DUF299)
YP_003149533.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_003149534.1	PFAM: SMP-30/Gluconolaconase/LRE-like region
YP_003149535.1	PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain
YP_003149536.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003149537.1	PFAM: Predicted permease
YP_003149538.1	PFAM: ABC transporter
YP_003149539.1	PFAM: Transposase, Mutator family
YP_003149541.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_003149542.1	PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family
YP_003149543.1	PFAM: Antibiotic biosynthesis monooxygenase
YP_003149545.1	PFAM: RecX family
YP_003149546.1	PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA
YP_003149549.1	PFAM: Membrane transport protein
YP_003149550.1	PFAM: DEAD/H associated; DEAD/DEAH box helicase; Helicase conserved C-terminal domain
YP_003149551.1	PFAM: Formamidopyrimidine-DNA glycosylase N-terminal domain; Formamidopyrimidine-DNA glycosylase H2TH domain; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg)
YP_003149552.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003149553.1	PFAM: Transposase
YP_003149554.1	PFAM: Transposase
YP_003149555.1	PFAM: Integrase core domain
YP_003149556.1	PFAM: Acetyltransferase (GNAT) family
YP_003149557.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003149558.1	PFAM: Ribosomal RNA adenine dimethylase
YP_003149559.1	PFAM: Flavodoxin-like fold
YP_003149560.1	PFAM: HxlR-like helix-turn-helix
YP_003149561.1	PFAM: Transposase
YP_003149562.1	PFAM: HTH domain
YP_003149563.1	PFAM: NmrA-like family
YP_003149564.1	PFAM: Transposase, Mutator family
YP_003149565.1	PFAM: Integrase core domain
YP_003149566.1	PFAM: Helix-turn-helix
YP_003149567.1	PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain
YP_003149568.1	PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_003149569.1	PFAM: Uncharacterized protein family UPF0004; Radical SAM superfamily; TIGRFAM: MiaB-like tRNA modifying enzyme YliG, TIGR01125; RNA modification enzyme, MiaB family
YP_003149571.1	PFAM: Transposase, Mutator family
YP_003149575.1	PFAM: Membrane dipeptidase (Peptidase family M19)
YP_003149576.1	PFAM: Ion channel
YP_003149577.1	PFAM: Ftsk gamma domain; FtsK/SpoIIIE family
YP_003149580.1	PFAM: Ykud domain; peptidoglycan binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003149582.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
YP_003149583.1	PFAM: Protein of unknown function DUF91
YP_003149584.1	PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase
YP_003149586.1	PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria)
YP_003149587.1	PFAM: Permease family; TIGRFAM: uracil-xanthine permease
YP_003149588.1	PFAM: 2OG-Fe(II) oxygenase superfamily
YP_003149589.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_003149590.1	PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit
YP_003149591.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_003149592.1	PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit
YP_003149593.1	PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b
YP_003149594.1	PFAM: ATP synthase subunit C
YP_003149595.1	PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
YP_003149598.1	PFAM: Glycosyl transferase family 4
YP_003149599.1	PFAM: Serine hydroxymethyltransferase
YP_003149600.1	PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein
YP_003149601.1	PFAM: Pentapeptide repeats (8 copies)
YP_003149602.1	PFAM: Methyltransferase small domain; TIGRFAM: HemK family  methylases; protein-(glutamine-N5) methyltransferase, release factor-specific
YP_003149603.1	PFAM: RF-1 domain; PCRF domain; TIGRFAM: peptide chain release factor 1
YP_003149604.1	PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31
YP_003149605.1	PFAM: NfeD-like
YP_003149606.1	PFAM: SPFH domain / Band 7 family
YP_003149607.1	PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; Rho termination factor, RNA-binding domain; TIGRFAM: transcription termination factor Rho
YP_003149608.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
YP_003149610.1	PFAM: ABC transporter
YP_003149612.1	kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth
YP_003149613.1	PFAM: Acetyltransferase (GNAT) family
YP_003149615.1	PFAM: Peptidase S24-like
YP_003149616.1	PFAM: Mannose-6-phosphate isomerase
YP_003149617.1	PFAM: Polysaccharide biosynthesis protein
YP_003149618.1	PFAM: Nickel-containing superoxide dismutase; TIGRFAM: superoxide dismutase, Ni
YP_003149619.1	PFAM: Inositol monophosphatase family
YP_003149620.1	PFAM: HD domain
YP_003149621.1	PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG
YP_003149623.1	TIGRFAM: anti-sigma factor, TIGR02949 family
YP_003149624.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, TIGR02947 family
YP_003149625.1	PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase
YP_003149626.1	PFAM: Glycosyl transferase family 4
YP_003149627.1	PFAM: Glycosyl transferases group 1
YP_003149628.1	PFAM: NAD dependent epimerase/dehydratase family
YP_003149629.1	PFAM: Polysaccharide biosynthesis protein C-terminal; Polysaccharide biosynthesis protein
YP_003149630.1	PFAM: NAD dependent epimerase/dehydratase family
YP_003149631.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase
YP_003149633.1	PFAM: Sulfotransferase domain
YP_003149634.1	PFAM: Polysaccharide deacetylase
YP_003149635.1	PFAM: Sulfotransferase domain
YP_003149636.1	PFAM: Bacterial transferase hexapeptide (three repeats)
YP_003149637.1	PFAM: Polysaccharide biosynthesis protein
YP_003149638.1	PFAM: Transposase
YP_003149639.1	PFAM: Integrase core domain
YP_003149643.1	PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; sulfate adenylyltransferase, large subunit
YP_003149644.1	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP
YP_003149645.1	PFAM:  capsular polysaccharide synthesis protein
YP_003149646.1	PFAM: Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK)
YP_003149647.1	PFAM: Domain of unknown function DUF81
YP_003149649.1	PFAM: Uncharacterised ACR, COG2135
YP_003149651.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase
YP_003149653.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase
YP_003149655.1	PFAM: Glycosyl transferases group 1
YP_003149659.1	PFAM: Iron-binding zinc finger CDGSH type
YP_003149660.1	TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003149663.1	PFAM: DoxX
YP_003149664.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase
YP_003149665.1	PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A
YP_003149668.1	PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_003149669.1	PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_003149670.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003149671.1	PFAM: Uncharacterised protein family (UPF0182)
YP_003149673.1	PFAM: PDZ domain (Also known as DHR or GLGF)
YP_003149674.1	PFAM: Uncharacterised conserved protein (DUF2342)
YP_003149675.1	PFAM: Protein of unknown function DUF45
YP_003149676.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_003149678.1	PFAM: Transcription factor WhiB
YP_003149680.1	PFAM: HRDC domain; UvrD/REP helicase
YP_003149681.1	PFAM: NADH pyrophosphatase-like rudimentary NUDIX domain; NUDIX domain
YP_003149682.1	PFAM: Sodium/hydrogen exchanger family
YP_003149683.1	PFAM: Phosphotransferase enzyme family
YP_003149684.1	PFAM: UvrD/REP helicase
YP_003149685.1	PFAM: UvrD/REP helicase
YP_003149686.1	PFAM: Rhodanese-like domain; MoeZ/MoeB domain; ThiF family
YP_003149688.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_003149689.1	PFAM: PHP domain
YP_003149690.1	PFAM: Protein of unknown function (DUF1212)
YP_003149691.1	PFAM: Aminopeptidase P, N-terminal domain; metallopeptidase family M24
YP_003149692.1	PFAM: Sulfate transporter family
YP_003149693.1	PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain
YP_003149694.1	PFAM: MoaE protein
YP_003149695.1	PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial
YP_003149696.1	PFAM: ThiS family
YP_003149698.1	PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC
YP_003149699.1	PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain
YP_003149700.1	PFAM: Rhodanese-like domain; MoeZ/MoeB domain; ThiF family
YP_003149702.1	PFAM: PRC-barrel domain; MgtE intracellular N domain; CBS domain pair
YP_003149703.1	PFAM: Protein of unknown function (DUF1003)
YP_003149704.1	PFAM: Domain of unknown function DUF59; ParA/MinD ATPase like
YP_003149705.1	PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase TatB
YP_003149706.1	PFAM: O-methyltransferase
YP_003149708.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_003149709.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_003149711.1	PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1; conserved hypothetical protein, DprA/Smf-related, family 2
YP_003149712.1	PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type)
YP_003149713.1	PFAM: 4Fe-4S binding domain
YP_003149714.1	PFAM: VanW like protein
YP_003149715.1	PFAM: Flavin reductase like domain; GlcNAc-PI de-N-acetylase
YP_003149716.1	PFAM: Polyphosphate kinase 2; TIGRFAM: UbiD family decarboxylases
YP_003149717.1	PFAM: Transmembrane amino acid transporter protein; TIGRFAM: serine transporter
YP_003149718.1	PFAM: Elongation factor G C-terminus; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; GTP-binding protein TypA/BipA
YP_003149719.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_003149720.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003149721.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003149722.1	PFAM: Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter
YP_003149723.1	PFAM: Oligopeptide/dipeptide transporter, C-terminal region; ABC transporter; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_003149724.1	PFAM: Integral membrane protein DUF125
YP_003149725.1	PFAM: Glutamine amidotransferase class-I
YP_003149726.1	PFAM: Universal stress protein family
YP_003149727.1	PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class
YP_003149728.1	PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)
YP_003149729.1	PFAM: Acetyltransferase (GNAT) family; TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase
YP_003149730.1	catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde
YP_003149731.1	N-acetyldiaminobutyrate dehydratase; catalyzes the formation of the osmoprotectant ecotoine from gamma-N-acetyl-alpha,gamma-diaminobutyric acid
YP_003149732.1	PFAM: Phytanoyl-CoA dioxygenase (PhyH); TIGRFAM: ectoine hydroxylase
YP_003149733.1	PFAM: NADPH-dependent FMN reductase
YP_003149734.1	PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type
YP_003149735.1	PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC
YP_003149736.1	PFAM: Protein of unknown function (DUF808)
YP_003149737.1	PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: mismatch-specific thymine-DNA glycosylate (mug)
YP_003149738.1	PFAM: Small Multidrug Resistance protein
YP_003149739.1	PFAM: short chain dehydrogenase
YP_003149740.1	PFAM: Luciferase-like monooxygenase
YP_003149741.1	PFAM: NADPH-dependent FMN reductase
YP_003149742.1	catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA and has been shown to have polymerase activity
YP_003149743.1	PFAM: Ku70/Ku80 beta-barrel domain; TIGRFAM: Ku protein, prokaryotic
YP_003149744.1	PFAM: Protein of unknown function (DUF664)
YP_003149748.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_003149751.1	PFAM: E1-E2 ATPase; Cation transporter/ATPase, N-terminus; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; plasma-membrane calcium-translocating P-type ATPase
YP_003149754.1	PFAM: Protein of unknown function DUF86
YP_003149755.1	PFAM: Nucleotidyltransferase domain
YP_003149756.1	PFAM: Uncharacterised BCR, YnfA/UPF0060 family
YP_003149757.1	PFAM: MoeZ/MoeB domain; ThiF family
YP_003149758.1	PFAM: MoaE protein
YP_003149759.1	PFAM: Probable molybdopterin binding domain; MoeA C-terminal region (domain IV); MoeA N-terminal region (domain I and II); TIGRFAM: molybdenum cofactor synthesis domain
YP_003149760.1	PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC
YP_003149761.1	PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain
YP_003149762.1	PFAM: Radical SAM superfamily; Molybdenum Cofactor Synthesis C; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial
YP_003149765.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: NifC-like ABC-type porter; molybdate ABC transporter, permease protein
YP_003149766.1	PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_003149770.1	PFAM: AMP-binding enzyme; TIGRFAM: non-ribosomal peptide synthetase terminal domain of unknown function; amino acid adenylation domain
YP_003149771.1	PFAM: Domain of unknown function (DUF368)
YP_003149773.1	PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain
YP_003149774.1	PFAM: Heavy-metal-associated domain
YP_003149775.1	PFAM: haloacid dehalogenase-like hydrolase; E1-E2 ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
YP_003149776.1	PFAM: Transposase
YP_003149777.1	PFAM: Integrase core domain
YP_003149779.1	PFAM: Transposase, Mutator family
YP_003149780.1	PFAM: Transposase IS116/IS110/IS902 family
YP_003149781.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
YP_003149782.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein
YP_003149784.1	PFAM: 4'-phosphopantetheinyl transferase superfamily
YP_003149786.1	PFAM: RmuC family
YP_003149788.1	PFAM: Bacterial transcription activator, effector binding domain
YP_003149789.1	PFAM: MerR family regulatory protein
YP_003149791.1	PFAM: Resolvase, N terminal domain; Recombinase
YP_003149797.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003149798.1	PFAM: Luciferase-like monooxygenase
YP_003149799.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
YP_003149800.1	PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit
YP_003149801.1	PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit
YP_003149803.1	type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese
YP_003149804.1	PFAM: pfkB family carbohydrate kinase
YP_003149805.1	PFAM: ABC transporter
YP_003149806.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003149807.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003149808.1	PFAM: Bacterial extracellular solute-binding protein
YP_003149809.1	PFAM: Carbonic anhydrase
YP_003149810.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; TIGRFAM: phosphoglucosamine mutase
YP_003149811.1	PFAM: Ribosomal protein S9/S16
YP_003149812.1	PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type
YP_003149813.1	PFAM: Bacterial regulatory protein, arsR family
YP_003149814.1	PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I
YP_003149815.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; beta-phosphoglucomutase family hydrolase
YP_003149816.1	PFAM: Glycosyl hydrolase family 65, C-terminal domain; Glycosyl hydrolase family 65, N-terminal domain; Glycosyl hydrolase family 65 central catalytic domain
YP_003149817.1	PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17
YP_003149818.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_003149819.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_003149820.1	PFAM: Ribosomal protein S11
YP_003149821.1	PFAM: Ribosomal protein S13/S18
YP_003149822.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif
YP_003149823.1	PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1
YP_003149824.1	PFAM: metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I
YP_003149825.1	PFAM: Adenylate kinase; TIGRFAM: adenylate kinases
YP_003149826.1	PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit
YP_003149827.1	PFAM: Ribosomal protein L15; Ribosomal protein L15 amino terminal region; TIGRFAM: ribosomal protein L15, bacterial/organelle
YP_003149828.1	PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle
YP_003149829.1	PFAM: Ribosomal protein S5, C-terminal domain; Ribosomal protein S5, N-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type
YP_003149830.1	PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type
YP_003149831.1	PFAM: Ribosomal protein L6
YP_003149832.1	PFAM: Ribosomal protein S8
YP_003149833.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif
YP_003149834.1	PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5
YP_003149835.1	TIGRFAM: ribosomal protein L24, bacterial/organelle
YP_003149836.1	PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle
YP_003149837.1	PFAM: Ribosomal protein S17
YP_003149838.1	PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29
YP_003149839.1	PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle
YP_003149840.1	PFAM: Ribosomal protein S3, C-terminal domain; KH domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type
YP_003149841.1	PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type
YP_003149842.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_003149843.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_003149844.1	PFAM: Ribosomal protein L23
YP_003149845.1	PFAM: Ribosomal protein L4/L1 family
YP_003149846.1	PFAM: Ribosomal protein L3
YP_003149847.1	PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle
YP_003149848.1	PFAM: Protein of unknown function (DUF554)
YP_003149849.1	PFAM: Elongation factor Tu GTP binding domain; Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU
YP_003149850.1	PFAM: Elongation factor G C-terminus; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_003149851.1	PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle
YP_003149852.1	PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle
YP_003149853.1	PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 3; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form
YP_003149854.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_003149855.1	PFAM: ABC transporter
YP_003149856.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_003149857.1	PFAM: Ribosomal protein L10
YP_003149860.1	PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast
YP_003149861.1	PFAM: Ribosomal protein L11, N-terminal domain; Ribosomal protein L11, RNA binding domain; TIGRFAM: 50S ribosomal protein L11
YP_003149862.1	PFAM: Transcription termination factor nusG; TIGRFAM: transcription termination/antitermination factor NusG
YP_003149863.1	PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial
YP_003149864.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
YP_003149865.1	PFAM: Integrase core domain
YP_003149866.1	PFAM: Transposase
YP_003149868.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003149870.1	PFAM: Transposase
YP_003149872.1	catalyzes the formation of inosine from adenosine
YP_003149873.1	PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; FAD binding domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase
YP_003149874.1	PFAM: MaoC like domain
YP_003149876.1	PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type
YP_003149877.1	PFAM: MaoC like domain
YP_003149878.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_003149879.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_003149880.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003149881.1	PFAM: Acyl-CoA oxidase; Acyl-CoA dehydrogenase, N-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, C-terminal domain
YP_003149882.1	PFAM: Rhodanese-like domain
YP_003149883.1	PFAM: Domain of unknown function DUF81
YP_003149884.1	PFAM: Rhodanese-like domain; Metallo-beta-lactamase superfamily
YP_003149885.1	PFAM: Uncharacterised BCR, COG1937
YP_003149886.1	PFAM: Aminotransferase class-III; TIGRFAM: ornithine aminotransferase
YP_003149887.1	PFAM: Major Facilitator Superfamily
YP_003149888.1	PFAM: Protein of unknown function (DUF520)
YP_003149889.1	PFAM: Peptidase family M1; TIGRFAM: aminopeptidase N, Streptomyces lividans type
YP_003149890.1	PFAM: Peptidase family M48
YP_003149891.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_003149892.1	PFAM: Integral membrane protein DUF6; TIGRFAM: rarD protein
YP_003149893.1	PFAM: Bacterial protein of unknown function (DUF839); TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
YP_003149894.1	PFAM: Polyprenyl synthetase
YP_003149895.1	PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases
YP_003149896.1	PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases
YP_003149897.1	PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase
YP_003149899.1	PFAM: Transposase
YP_003149901.1	PFAM: ABC transporter transmembrane region
YP_003149903.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; HAMP domain
YP_003149904.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003149906.1	PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32
YP_003149907.1	PFAM: Peptidase family M13; Peptidase family M13
YP_003149908.1	PFAM: D-alanyl-D-alanine carboxypeptidase; Bacterial SH3 domain
YP_003149909.1	PFAM: Amino acid permease
YP_003149910.1	PFAM: HMGL-like
YP_003149911.1	PFAM: Type III restriction enzyme, res subunit; Helicase conserved C-terminal domain
YP_003149912.1	PFAM: Protein of unknown function (DUF2029)
YP_003149913.1	PFAM: Protein of unknown function (DUF2029)
YP_003149914.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_003149915.1	PFAM: HAMP domain; His Kinase A (phosphoacceptor) domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003149916.1	PFAM: PDZ domain (Also known as DHR or GLGF); Trypsin
YP_003149917.1	PFAM: Uncharacterized BCR, YitT family COG1284
YP_003149918.1	PFAM: ABC transporter; TIGRFAM: ectoine/hydroxyectoine ABC transporter, ATP-binding protein
YP_003149919.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_003149920.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_003149921.1	PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: ectoine/hydroxyectoine ABC transporter solute-binding protein
YP_003149924.1	PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31
YP_003149927.1	PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL
YP_003149928.1	PFAM: haloacid dehalogenase-like hydrolase
YP_003149929.1	PFAM: 2OG-Fe(II) oxygenase superfamily; TIGRFAM: DNA alkylation damage repair protein AlkB
YP_003149930.1	PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I
YP_003149933.1	PFAM: PemK-like protein
YP_003149935.1	PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase
YP_003149936.1	PFAM: GDSL-like Lipase/Acylhydrolase
YP_003149937.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain; Acyl-CoA dehydrogenase, middle domain
YP_003149938.1	PFAM: short chain dehydrogenase
YP_003149939.1	PFAM: Major Facilitator Superfamily
YP_003149940.1	PFAM: short chain dehydrogenase
YP_003149941.1	PFAM: Subtilase family; Peptidase inhibitor I9
YP_003149942.1	PFAM: RimK-like ATP-grasp domain; TrkA-C domain; TIGRFAM: alpha-L-glutamate ligases, RimK family
YP_003149943.1	PFAM: Ribonucleotide reductase, small chain
YP_003149944.1	PFAM: ATP cone domain; Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit
YP_003149945.1	PFAM: Major Facilitator Superfamily
YP_003149946.1	PFAM: Bacterial protein of unknown function (DUF839)
YP_003149948.1	PFAM: Integrase core domain
YP_003149949.1	PFAM: Transposase
YP_003149951.1	PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family
YP_003149952.1	PFAM: ABC transporter
YP_003149953.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003149955.1	PFAM: Periplasmic binding protein
YP_003149956.1	PFAM: FecCD transport family
YP_003149957.1	PFAM: FecCD transport family
YP_003149958.1	PFAM: ABC transporter
YP_003149959.1	PFAM: CAAX amino terminal protease family
YP_003149960.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase
YP_003149963.1	PFAM: ABC transporter
YP_003149964.1	PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase
YP_003149965.1	PFAM: Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain; methylmalonyl-CoA mutase N-terminal domain
YP_003149966.1	PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase, heterodimeric type, beta chain; glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
YP_003149970.1	PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD
YP_003149971.1	PFAM: Activator of Hsp90 ATPase homolog 1-like protein
YP_003149973.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_003149975.1	PFAM: Major Facilitator Superfamily
YP_003149982.1	PFAM: Transposase, Mutator family
YP_003149984.1	PFAM: Bacterial regulatory protein, arsR family
YP_003149985.1	PFAM: Activator of Hsp90 ATPase homolog 1-like protein
YP_003149986.1	PFAM: Transposase
YP_003149987.1	PFAM:  regulatory protein (CxxC_CxxC_SSSS); TIGRFAM:  regulatory protein, FmdB family
YP_003149988.1	TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_003149989.1	PFAM: Citrate transporter
YP_003149990.1	PFAM: alpha/beta hydrolase fold
YP_003149991.1	PFAM: Oxidoreductase FAD-binding domain; Cytochrome P450; Oxidoreductase NAD-binding domain; 2Fe-2S iron-sulfur cluster binding domain
YP_003149993.1	PFAM: Protein of unknown function (DUF1445)
YP_003149995.1	PFAM: Uncharacterised protein family UPF0047; TIGRFAM: conserved hypothetical protein TIGR00149
YP_003149996.1	PFAM: Zinc-binding dehydrogenase; Alcohol dehydrogenase GroES-like domain
YP_003149997.1	PFAM: Acetyltransferase (GNAT) family
YP_003149998.1	PFAM: Nucleoside recognition
YP_003149999.1	PFAM: Domain of Unknown Function (DUF326)
YP_003150000.1	PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter
YP_003150001.1	PFAM: Acetyltransferase (GNAT) family
YP_003150004.1	PFAM: Fic/DOC family
YP_003150007.1	PFAM: PIN domain
YP_003150008.1	PFAM: Rv0623-like transcription factor
YP_003150009.1	PFAM: Protein of unknown function (DUF1524); Protein of unknown function DUF262
YP_003150012.1	PFAM: Transposase
YP_003150013.1	PFAM: Bacterial SH3 domain
YP_003150017.1	PFAM: Calcineurin-like phosphoesterase
YP_003150020.1	PFAM: Domain of unknown function (DUF1814)
YP_003150021.1	PFAM: Integrase core domain
YP_003150022.1	PFAM: N-6 DNA Methylase
YP_003150024.1	PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit
YP_003150025.1	PFAM: Restriction endonuclease
YP_003150026.1	PFAM: Transposase
YP_003150028.1	PFAM: Protein of unknown function (DUF917)
YP_003150029.1	PFAM: Protein of unknown function (DUF917)
YP_003150030.1	PFAM: Protein of unknown function (DUF917)
YP_003150031.1	PFAM: Hydantoinase/oxoprolinase N-terminal region; Hydantoinase/oxoprolinase
YP_003150032.1	PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin
YP_003150034.1	PFAM: Integrase core domain
YP_003150035.1	PFAM: Amino acid permease
YP_003150036.1	PFAM: D-ala-D-ala dipeptidase
YP_003150040.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003150041.1	PFAM: NAD dependent epimerase/dehydratase family
YP_003150044.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2176)
YP_003150045.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2186)
YP_003150046.1	PFAM: Methyltransferase domain
YP_003150049.1	PFAM: MarR family
YP_003150050.1	PFAM: Predicted membrane protein (DUF2306)
YP_003150051.1	PFAM: Methyltransferase domain
YP_003150053.1	PFAM: Peptidase family M20/M25/M40; TIGRFAM: amidohydrolase
YP_003150054.1	PFAM: ACT domain; Prephenate dehydratase; Chorismate mutase type II; Prephenate dehydrogenase; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2
YP_003150055.1	PFAM: Quinolinate phosphoribosyl transferase, N-terminal domain; Quinolinate phosphoribosyl transferase, C-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase
YP_003150056.1	PFAM: FAD binding domain
YP_003150057.1	PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit
YP_003150060.1	PFAM: Domain of unknown function DUF20
YP_003150061.1	PFAM: Aldose 1-epimerase
YP_003150062.1	PFAM: Flavin containing amine oxidoreductase
YP_003150063.1	PFAM: Flavin containing amine oxidoreductase
YP_003150064.1	PFAM: Thiolase, N-terminal domain; Thiolase, C-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_003150065.1	PFAM: Fatty acid desaturase
YP_003150066.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_003150068.1	PFAM: GDSL-like Lipase/Acylhydrolase
YP_003150069.1	PFAM: Uncharacterized conserved protein (DUF2277)
YP_003150072.1	PFAM: 4Fe-4S binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein
YP_003150073.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol
YP_003150074.1	TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family
YP_003150075.1	PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase
YP_003150076.1	PFAM: Bacterial membrane flanked domain
YP_003150077.1	PFAM: Bacterial membrane flanked domain
YP_003150078.1	PFAM: DJ-1/PfpI family
YP_003150080.1	PFAM: Domain of unknown function (DUF305)
YP_003150083.1	PFAM: Protein of unknown function (DUF1541)
YP_003150085.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-(or silver)-translocating P-type ATPase
YP_003150086.1	PFAM: Transposase
YP_003150087.1	PFAM: Transposase
YP_003150088.1	PFAM: Transposase
YP_003150089.1	PFAM: Bacterial regulatory hypothetical proteins, AraC family
YP_003150090.1	PFAM: MerR family regulatory protein; MerR, DNA binding
YP_003150091.1	PFAM: Transposase
YP_003150092.1	PFAM: Integrase core domain
YP_003150093.1	PFAM: Major Facilitator Superfamily
YP_003150094.1	PFAM: MerR family regulatory protein
YP_003150095.1	PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family
YP_003150096.1	PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit
YP_003150097.1	PFAM: Transposase
YP_003150099.1	PFAM: Pyruvate phosphate dikinase, PEP/pyruvate binding domain; PEP-utilising enzyme, mobile domain
YP_003150102.1	PFAM: Bacterial regulatory proteins, luxR family; Response regulator receiver domain
YP_003150103.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_003150104.1	PFAM: ABC transporter
YP_003150108.1	PFAM: Bacterial regulatory hypothetical proteins, AraC family
YP_003150109.1	PFAM: MarR family
YP_003150112.1	PFAM: Integrase core domain
YP_003150113.1	PFAM: Major Facilitator Superfamily
YP_003150116.1	PFAM: NAD dependent epimerase/dehydratase family
YP_003150117.1	PFAM: MarR family
YP_003150118.1	PFAM: Transposase
YP_003150120.1	PFAM: Acetyltransferase (GNAT) family
YP_003150121.1	PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase
YP_003150122.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase
YP_003150123.1	PFAM:  regulatory protein (CxxC_CxxC_SSSS); TIGRFAM:  regulatory protein, FmdB family
YP_003150124.1	PFAM: SAF domain
YP_003150125.1	PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein
YP_003150128.1	PFAM: Activator of Hsp90 ATPase homolog 1-like protein
YP_003150130.1	PFAM: Calcineurin-like phosphoesterase
YP_003150131.1	PFAM: CrcB-like protein
YP_003150132.1	PFAM: CrcB-like protein
YP_003150133.1	PFAM: CBS domain pair; Domain of unknown function DUF21
YP_003150134.1	PFAM: CBS domain pair; Transporter associated domain; Domain of unknown function DUF21
YP_003150135.1	PFAM: Iron dependent repressor, metal binding and dimerisation domain; FeoA domain; Iron dependent repressor, N-terminal DNA binding domain
YP_003150136.1	PFAM: LD-carboxypeptidase
YP_003150137.1	PFAM: Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; Pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine-phosphate oxidase
YP_003150139.1	PFAM: Peptidase family M1; TIGRFAM: aminopeptidase N, Streptomyces lividans type
YP_003150141.1	PFAM: Permease family
YP_003150143.1	PFAM: 'Cold-shock' DNA-binding domain
YP_003150146.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; TIGRFAM: o-succinylbenzoic acid (OSB) synthetase
YP_003150147.1	PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: naphthoate synthase (dihydroxynaphthoic acid synthetase)
YP_003150148.1	PFAM: AMP-binding enzyme
YP_003150149.1	PFAM: Major Facilitator Superfamily
YP_003150150.1	PFAM: Nitroreductase family
YP_003150152.1	PFAM: Transposase
YP_003150153.1	PFAM: Transposase, Mutator family
YP_003150155.1	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family
YP_003150156.1	PFAM: Ribbon-helix-helix protein, copG family
YP_003150158.1	PFAM: UbiA prenyltransferase family; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
YP_003150162.1	PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB
YP_003150163.1	PFAM: ResB-like family
YP_003150164.1	PFAM: Cytochrome C biogenesis protein transmembrane region
YP_003150165.1	PFAM: Redoxin
YP_003150166.1	PFAM: Phosphoglycerate mutase family
YP_003150167.1	PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase
YP_003150168.1	PFAM: Delta-aminolevulinic acid dehydratase
YP_003150169.1	PFAM: Uroporphyrinogen-III synthase HemD; Tetrapyrrole (Corrin/Porphyrin) Methylases
YP_003150170.1	PFAM: Porphobilinogen deaminase, dipyromethane cofactor binding domain; Porphobilinogen deaminase, C-terminal domain; TIGRFAM: porphobilinogen deaminase
YP_003150171.1	PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Glutamyl-tRNAGlu reductase, dimerisation domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: glutamyl-tRNA reductase
YP_003150172.1	PFAM: Mitochondrial domain of unknown function (DUF1713)
YP_003150173.1	PFAM: Histone deacetylase domain
YP_003150174.1	PFAM: TrkA-N domain
YP_003150175.1	PFAM: Acetyltransferase (GNAT) family
YP_003150176.1	PFAM: Acetyltransferase (GNAT) family
YP_003150177.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase
YP_003150178.1	PFAM: Proline dehydrogenase
YP_003150179.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003150182.1	PFAM: Integrase core domain
YP_003150183.1	PFAM: Xylose isomerase-like TIM barrel
YP_003150184.1	PFAM: Ppx/GppA phosphatase family
YP_003150185.1	TIGRFAM: DNA repair protein RadA
YP_003150186.1	PFAM: Domain of unknown function (DUF2382)
YP_003150187.1	non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair
YP_003150188.1	PFAM: Helix-hairpin-helix motif; Iron-sulfur binding domain of endonuclease III; TIGRFAM: A/G-specific adenine glycosylase
YP_003150191.1	PFAM: C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); ATPase family associated with various cellular activities (AAA); Clp amino terminal domain
YP_003150192.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_003150193.1	PFAM: Chain length determinant protein; TIGRFAM: capsular exopolysaccharide family
YP_003150196.1	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1
YP_003150197.1	PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase
YP_003150198.1	PFAM: Metal binding domain of Ada; AlkA N-terminal domain; HhH-GPD superfamily base excision DNA repair protein; Bacterial regulatory hypothetical proteins, AraC family
YP_003150199.1	PFAM: Domain of unknown function (DUF2520); Rossmann-like domain
YP_003150200.1	PFAM: GDSL-like Lipase/Acylhydrolase
YP_003150201.1	PFAM: NUDIX domain
YP_003150202.1	PFAM: Protein of unknown function (DUF1470)
YP_003150203.1	PFAM: Integral membrane protein DUF6
YP_003150205.1	PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); Dihydroneopterin aldolase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; dihydroneopterin aldolase; FolB domain
YP_003150206.1	PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase
YP_003150207.1	PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I
YP_003150208.1	PFAM: Peptidase family M41; FtsH Extracellular; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH
YP_003150209.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase
YP_003150210.1	PFAM: PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, N-terminal domain
YP_003150211.1	PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family
YP_003150212.1	PFAM: Inorganic pyrophosphatase
YP_003150213.1	PFAM: YCII-related domain
YP_003150214.1	PFAM: alpha/beta hydrolase fold; TAP-like protein
YP_003150215.1	TIGRFAM: DNA polymerase III, delta' subunit
YP_003150216.1	PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase
YP_003150217.1	PFAM: MarR family
YP_003150218.1	PFAM: Protein of unknown function DUF124
YP_003150219.1	PFAM: Acetyltransferase (GNAT) family
YP_003150220.1	PFAM: Protein of unknown function (DUF779)
YP_003150221.1	PFAM: Aldehyde dehydrogenase family
YP_003150223.1	PFAM: Domain of unknown function (DUF477)
YP_003150224.1	PFAM: Cys/Met metabolism PLP-dependent enzyme
YP_003150225.1	PFAM: MerR, DNA binding; TipAS antibiotic-recognition domain; MerR family regulatory protein
YP_003150226.1	PFAM: PIN domain
YP_003150227.1	PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family
YP_003150228.1	PFAM: Acetyltransferase (GNAT) family
YP_003150229.1	PFAM: Bacterial regulatory hypothetical proteins, AraC family
YP_003150230.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003150231.1	PFAM: PIN domain
YP_003150232.1	PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family
YP_003150233.1	PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial
YP_003150234.1	PFAM: Fic/DOC family
YP_003150235.1	PFAM: RibD C-terminal domain
YP_003150237.1	TIGRFAM: Mycobacterium tuberculosis PIN domain family
YP_003150240.1	PFAM: Transposase
YP_003150242.1	PFAM: Methyltransferase small domain
YP_003150243.1	PFAM: GlcNAc-PI de-N-acetylase
YP_003150245.1	PFAM: LemA family
YP_003150246.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003150248.1	PFAM: ABC transporter; TIGRFAM: ATP-binding ABC transporter family nodulation protein NodI
YP_003150249.1	PFAM: ABC-2 type transporter
YP_003150250.1	PFAM: ABC-2 type transporter; TIGRFAM: ABC-2 type transporter, NodJ family
YP_003150251.1	PFAM: DEAD/DEAH box helicase; Helicase conserved C-terminal domain; Domain of unknown function (DUF1998)
YP_003150254.1	PFAM: TadE-like protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_003150256.1	PFAM: Bacterial type II secretion system protein F domain
YP_003150257.1	PFAM: Bacterial type II secretion system protein F domain
YP_003150258.1	PFAM: Type II/IV secretion system protein
YP_003150260.1	PFAM: ABC transporter
YP_003150261.1	PFAM: FecCD transport family
YP_003150262.1	PFAM: FecCD transport family
YP_003150263.1	PFAM: Periplasmic binding protein
YP_003150264.1	PFAM: Fic/DOC family
YP_003150265.1	PFAM: Protein of unknown function (DUF1469)
YP_003150266.1	PFAM: NUDIX domain
YP_003150267.1	PFAM: Helix-hairpin-helix motif; Iron-sulfur binding domain of endonuclease III; TIGRFAM: endonuclease III
YP_003150268.1	PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain
YP_003150269.1	PFAM: Metallo-beta-lactamase superfamily
YP_003150270.1	PFAM: NUDIX domain
YP_003150271.1	PFAM: Endoribonuclease L-PSP
YP_003150273.1	PFAM: Transglycosylase; Penicillin binding protein transpeptidase domain
YP_003150274.1	PFAM: Yqey-like protein
YP_003150275.1	PFAM: Calcineurin-like phosphoesterase
YP_003150276.1	PFAM: short chain dehydrogenase
YP_003150277.1	PFAM: Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase
YP_003150278.1	PFAM: YceI-like domain
YP_003150279.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003150280.1	PFAM: Acetyltransferase (GNAT) family
YP_003150284.1	PFAM: Bacterial regulatory proteins, tetR family
YP_003150285.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_003150286.1	PFAM: CoA-transferase family III
YP_003150287.1	PFAM: Transposase
YP_003150288.1	PFAM: MerR, DNA binding; MerR family regulatory protein
YP_003150289.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: mercuric reductase
YP_003150290.1	cleaves the carbon-mercury bond of organomercuric compounds
YP_003150291.1	PFAM: Transposase
YP_003150296.1	PFAM: Cadmium resistance transporter
YP_003150297.1	PFAM: Bacterial regulatory protein, arsR family
YP_003150298.1	PFAM: Helix-turn-helix domain of resolvase; Resolvase, N terminal domain
YP_003150299.1	PFAM: Integrase core domain
YP_003150300.1	PFAM: IstB-like ATP binding protein
YP_003150301.1	PFAM: Cadmium resistance transporter
YP_003150302.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_003150303.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase
YP_003150304.1	PFAM: Bacterial regulatory protein, arsR family
YP_003150305.1	PFAM: ABC transporter
YP_003150307.1	PFAM: Cytochrome P450
YP_003150308.1	PFAM: Transposase, Mutator family
YP_003150309.1	PFAM: Bacterial regulatory protein, arsR family
YP_003150310.1	PFAM: Vitamin K epoxide reductase family
YP_003150311.1	PFAM: DSBA-like thioredoxin domain
YP_003150313.1	PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase
YP_003150314.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_003150315.1	PFAM: Transposase, Mutator family
YP_003150317.1	PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR
YP_003150318.1	PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: DNA polymerase III, subunits gamma and tau
YP_003150320.1	PFAM: Bacterial protein of unknown function (DUF853)
YP_003150322.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_003150323.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_003150324.1	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate
YP_003150326.1	PFAM: Bacterial membrane flanked domain
YP_003150327.1	PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase
YP_003150328.1	PFAM: O-Antigen Polymerase
YP_003150330.1	PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain
YP_003150331.1	PFAM: 'Cold-shock' DNA-binding domain
YP_003150332.1	PFAM: Bacterial DNA-binding protein
YP_003150334.1	PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase
YP_003150335.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase A
YP_003150336.1	PFAM: Cysteine-rich domain; 4Fe-4S binding domain
YP_003150338.1	PFAM: Protein of unknown function (DUF1696)
YP_003150339.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YP_003150340.1	PFAM: Substrate binding domain of ABC-type glycine betaine transport system
YP_003150341.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003150342.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003150343.1	PFAM: ABC transporter; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit
YP_003150344.1	Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis
YP_003150345.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK
YP_003150346.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003150347.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_003150348.1	PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain
YP_003150349.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_003150350.1	PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein
YP_003150351.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_003150354.1	PFAM: ABC transporter
YP_003150356.1	PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_003150357.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_003150358.1	PFAM: Bacterial regulatory protein, arsR family
YP_003150359.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_003150360.1	PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein
YP_003150361.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase, glutathione/glutaredoxin type
YP_003150362.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_003150364.1	catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine
YP_003150365.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_003150368.1	PFAM: Carbon-nitrogen hydrolase
YP_003150369.1	PFAM: Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG); Copper resistance protein D
YP_003150371.1	PFAM: Ribosomal protein L9, C-terminal domain; Ribosomal protein L9, N-terminal domain; TIGRFAM: ribosomal protein L9
YP_003150372.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_003150373.1	PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)
YP_003150374.1	PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6
YP_003150376.1	PFAM: Myo-inositol-1-phosphate synthase; TIGRFAM: inositol 1-phosphate synthase, Actinobacterial type
YP_003150377.1	PFAM: Glycosyl transferases group 1
YP_003150380.1	PFAM: Glycosyl transferase family 2
YP_003150383.1	PFAM: Acyltransferase family
YP_003150384.1	PFAM: Glycosyl transferases group 1
YP_003150385.1	PFAM: Acyltransferase family; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
YP_003150386.1	PFAM: Glycosyl transferase family 2
YP_003150388.1	PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2
YP_003150391.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase
YP_003150392.1	PFAM: ABC-2 type transporter
YP_003150393.1	PFAM: ABC transporter
YP_003150394.1	PFAM: Glycosyl transferases group 1
YP_003150395.1	PFAM: Glycosyl transferase family 2
YP_003150396.1	PFAM: Glycosyl transferases group 1
YP_003150397.1	PFAM: Acyltransferase family
YP_003150398.1	PFAM: Glycosyl transferase family 2
YP_003150399.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase
YP_003150400.1	PFAM: Glycosyl transferases group 1
YP_003150401.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; TIGRFAM: nucleotide sugar dehydrogenase
YP_003150402.1	PFAM: Biotin-requiring enzyme
YP_003150404.1	PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: tRNA adenylyltransferase; uncharacterized domain HDIG
YP_003150405.1	PFAM: NUDIX domain
YP_003150407.1	PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN
YP_003150409.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase
YP_003150410.1	PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_003150411.1	PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins
YP_003150413.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_003150414.1	PFAM: Glucose inhibited division protein; TIGRFAM: glucose-inhibited division protein B
YP_003150415.1	PFAM: R3H domain
YP_003150416.1	PFAM: 60Kd inner membrane protein
YP_003150417.1	PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein TIGR00278
YP_003150418.1	PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial
YP_003150419.1	PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type