-- dump date 20140619_124023 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 644042000001 SEQ_END SEQ_END NC_012984.1 3197759 3197759 DR NC_012984.1; contig end 3197759..3197759 Lactobacillus plantarum JDM1 YP_003061587.1 CDS dnaA NC_012984.1 1 1368 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA 1..1368 Lactobacillus plantarum JDM1 8187649 YP_003061588.1 CDS dnaN NC_012984.1 1546 2685 D DNA-directed DNA polymerase III, beta chain 1546..2685 Lactobacillus plantarum JDM1 8189739 YP_003061589.1 CDS JDM1_0003 NC_012984.1 3210 3443 D hypothetical protein 3210..3443 Lactobacillus plantarum JDM1 8189740 YP_003061590.1 CDS recF NC_012984.1 3444 4568 D Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 3444..4568 Lactobacillus plantarum JDM1 8189741 YP_003061591.1 CDS gyrB NC_012984.1 4565 6511 D DNA gyrase, B subunit 4565..6511 Lactobacillus plantarum JDM1 8189742 YP_003061592.1 CDS gyrA NC_012984.1 6676 9237 D DNA gyrase, A subunit 6676..9237 Lactobacillus plantarum JDM1 8189743 YP_003061593.1 CDS rpsF NC_012984.1 9859 10158 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 9859..10158 Lactobacillus plantarum JDM1 8189744 YP_003061594.1 CDS ssb NC_012984.1 10195 10797 D single-strand binding protein 10195..10797 Lactobacillus plantarum JDM1 8189745 YP_003061595.1 CDS rpsR NC_012984.1 10836 11072 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 10836..11072 Lactobacillus plantarum JDM1 8189746 YP_003061596.1 CDS JDM1_0010 NC_012984.1 11253 13265 D exopolyphosphatase 11253..13265 Lactobacillus plantarum JDM1 8189747 YP_003061597.1 CDS rplI NC_012984.1 13278 13730 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 13278..13730 Lactobacillus plantarum JDM1 8189748 YP_003061598.1 CDS dnaC NC_012984.1 13746 15170 D replicative DNA helicase DnaC 13746..15170 Lactobacillus plantarum JDM1 8189749 YP_003061599.1 CDS isp2 NC_012984.1 15167 16846 R transposase complement(15167..16846) Lactobacillus plantarum JDM1 8189751 YP_003061600.1 CDS JDM1_0014 NC_012984.1 17163 18386 D transport protein 17163..18386 Lactobacillus plantarum JDM1 8189750 YP_003061601.1 CDS proB NC_012984.1 18399 19205 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 18399..19205 Lactobacillus plantarum JDM1 8189752 YP_003061602.1 CDS proA NC_012984.1 19224 20462 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 19224..20462 Lactobacillus plantarum JDM1 8189753 YP_003061603.1 CDS JDM1_0017 NC_012984.1 20923 22539 D lipoprotein precursor, peptide binding protein OppA-like protein 20923..22539 Lactobacillus plantarum JDM1 8189754 YP_003061604.1 CDS glgB NC_012984.1 22870 24774 D catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme 22870..24774 Lactobacillus plantarum JDM1 8189755 YP_003061605.1 CDS glgC NC_012984.1 24764 25903 D catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 24764..25903 Lactobacillus plantarum JDM1 8189756 YP_003061606.1 CDS glgD NC_012984.1 25900 27072 D glucose-1-phosphate adenylyltransferase, subunit 25900..27072 Lactobacillus plantarum JDM1 8189757 YP_003061607.1 CDS glgA NC_012984.1 27065 28504 D catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 27065..28504 Lactobacillus plantarum JDM1 8189758 YP_003061608.1 CDS glgP NC_012984.1 28524 30920 D glycogen phosphorylase 28524..30920 Lactobacillus plantarum JDM1 8189759 YP_003061609.1 CDS amy1 NC_012984.1 30938 32755 D alpha-amylase 30938..32755 Lactobacillus plantarum JDM1 8189760 YP_003061610.1 CDS JDM1_0024 NC_012984.1 33088 33855 D HAD superfamily hydrolase 33088..33855 Lactobacillus plantarum JDM1 8189761 YP_003061611.1 CDS pgmB1 NC_012984.1 34007 34678 R beta-phosphoglucomutase complement(34007..34678) Lactobacillus plantarum JDM1 8189762 YP_003061612.1 CDS map1 NC_012984.1 34696 37416 R maltose phosphorylase complement(34696..37416) Lactobacillus plantarum JDM1 8189763 YP_003061613.1 CDS JDM1_0027 NC_012984.1 37804 38253 R hypothetical protein complement(37804..38253) Lactobacillus plantarum JDM1 8189764 YP_003061614.1 CDS cspL NC_012984.1 38452 38652 D cold shock protein CspL 38452..38652 Lactobacillus plantarum JDM1 8189765 YP_003061615.1 CDS JDM1_0029 NC_012984.1 38744 38974 D hypothetical protein 38744..38974 Lactobacillus plantarum JDM1 8189766 YP_003061616.1 CDS JDM1_0030 NC_012984.1 39443 40597 R prophage Lp3 protein 1, integrase complement(39443..40597) Lactobacillus plantarum JDM1 8189767 YP_003061617.1 CDS JDM1_0031 NC_012984.1 40676 41320 R hypothetical protein complement(40676..41320) Lactobacillus plantarum JDM1 8189768 YP_003061618.1 CDS JDM1_0032 NC_012984.1 41511 41648 D hypothetical protein 41511..41648 Lactobacillus plantarum JDM1 8189769 YP_003061619.1 CDS JDM1_0033 NC_012984.1 41691 41798 D prophage Lp3 protein 5 41691..41798 Lactobacillus plantarum JDM1 8189770 YP_003061620.1 CDS JDM1_0034 NC_012984.1 41916 42146 D hypothetical protein 41916..42146 Lactobacillus plantarum JDM1 8189771 YP_003061621.1 CDS JDM1_0035 NC_012984.1 42160 42960 D prophage Lp3 protein 7 42160..42960 Lactobacillus plantarum JDM1 8189772 YP_003061622.1 CDS JDM1_0036 NC_012984.1 42960 44354 D prophage Lp3 protein 8, helicase 42960..44354 Lactobacillus plantarum JDM1 8189773 YP_003061623.1 CDS JDM1_0037 NC_012984.1 44498 44917 D prophage Lp4 protein 12 44498..44917 Lactobacillus plantarum JDM1 8189774 YP_003061624.1 CDS JDM1_0038 NC_012984.1 44942 45124 D hypothetical protein 44942..45124 Lactobacillus plantarum JDM1 8189775 YP_003061625.1 CDS JDM1_0039 NC_012984.1 45134 45472 D prophage Lp3 protein 11 45134..45472 Lactobacillus plantarum JDM1 8189776 YP_003061626.1 CDS JDM1_0040 NC_012984.1 45465 45854 D prophage Lp3 protein 12 45465..45854 Lactobacillus plantarum JDM1 8189777 YP_003061627.1 CDS JDM1_0041 NC_012984.1 46663 47661 R transposase-like protein complement(46663..47661) Lactobacillus plantarum JDM1 8189778 YP_003061628.1 CDS JDM1_0042 NC_012984.1 47806 48279 D prophage Lp3 protein 14, terminase small subunit 47806..48279 Lactobacillus plantarum JDM1 8189779 YP_003061629.1 CDS JDM1_0043 NC_012984.1 48276 48683 D prophage Lp3 protein 15, terminase large subunit 48276..48683 Lactobacillus plantarum JDM1 8189780 YP_003061630.1 CDS JDM1_0044 NC_012984.1 48706 49980 D prophage Lp3 protein 15, terminase large subunit 48706..49980 Lactobacillus plantarum JDM1 8189781 YP_003061631.1 CDS JDM1_0045 NC_012984.1 50135 51235 D prophage Lp3 protein 17, portal protein 50135..51235 Lactobacillus plantarum JDM1 8189782 YP_003061632.1 CDS JDM1_0046 NC_012984.1 51232 52773 D prophage Lp3 protein 18 51232..52773 Lactobacillus plantarum JDM1 8189783 YP_003061633.1 CDS JDM1_0047 NC_012984.1 53182 53448 D prophage Lp3 protein 19, head-to-tail joining 53182..53448 Lactobacillus plantarum JDM1 8189785 YP_003061634.1 CDS JDM1_0048 NC_012984.1 53592 53960 D prophage Lp3 protein 20 53592..53960 Lactobacillus plantarum JDM1 8189786 YP_003061635.1 CDS cspL NC_012984.1 54083 54283 D cold shock protein CspL 54083..54283 Lactobacillus plantarum JDM1 8189787 YP_003061636.1 CDS JDM1_0050 NC_012984.1 54370 54600 D hypothetical protein 54370..54600 Lactobacillus plantarum JDM1 8189788 YP_003061637.1 CDS rrp1 NC_012984.1 55203 55910 D response regulator 55203..55910 Lactobacillus plantarum JDM1 8189790 YP_003061638.1 CDS hpk1 NC_012984.1 55924 57798 D histidine protein kinase; sensor protein 55924..57798 Lactobacillus plantarum JDM1 8189791 YP_003061639.1 CDS JDM1_0053 NC_012984.1 57779 59104 D hypothetical protein 57779..59104 Lactobacillus plantarum JDM1 8189792 YP_003061640.1 CDS JDM1_0054 NC_012984.1 59116 59970 D hypothetical protein 59116..59970 Lactobacillus plantarum JDM1 8189793 YP_003061641.1 CDS JDM1_0055 NC_012984.1 60329 61144 D hydrolase 60329..61144 Lactobacillus plantarum JDM1 8189794 YP_003061642.1 CDS htrA NC_012984.1 61255 62517 D serine protease HtrA 61255..62517 Lactobacillus plantarum JDM1 8189795 YP_003061643.1 CDS JDM1_0057 NC_012984.1 63072 63551 D SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 63072..63551 Lactobacillus plantarum JDM1 8189796 YP_003061644.1 CDS JDM1_0058 NC_012984.1 63643 64032 R hypothetical protein complement(63643..64032) Lactobacillus plantarum JDM1 8189797 YP_003061645.1 CDS JDM1_0059 NC_012984.1 64176 64922 D transport protein 64176..64922 Lactobacillus plantarum JDM1 8189798 YP_003061646.1 CDS JDM1_0060 NC_012984.1 65736 66227 D hypothetical protein 65736..66227 Lactobacillus plantarum JDM1 8189799 YP_003061647.1 CDS pnb NC_012984.1 66470 67120 D p-nitrobenzoate reductase 66470..67120 Lactobacillus plantarum JDM1 8189800 YP_003061648.1 CDS JDM1_0062 NC_012984.1 67236 67604 D hypothetical protein 67236..67604 Lactobacillus plantarum JDM1 8189801 YP_003061649.1 CDS JDM1_0063 NC_012984.1 67561 67671 D hypothetical protein 67561..67671 Lactobacillus plantarum JDM1 8189802 YP_003061650.1 CDS JDM1_0064 NC_012984.1 67672 68499 R hypothetical protein complement(67672..68499) Lactobacillus plantarum JDM1 8189803 YP_003061651.1 CDS JDM1_0065 NC_012984.1 68666 71035 R fumarate reductase, flavoprotein subunit precursor complement(68666..71035) Lactobacillus plantarum JDM1 8189804 YP_003061652.1 CDS JDM1_0066 NC_012984.1 71501 72916 D cation transport protein 71501..72916 Lactobacillus plantarum JDM1 8189805 YP_003061653.1 CDS JDM1_0067 NC_012984.1 73027 73914 D transcription regulator 73027..73914 Lactobacillus plantarum JDM1 8189806 YP_003061654.1 CDS JDM1_0068 NC_012984.1 73984 74409 R hypothetical protein complement(73984..74409) Lactobacillus plantarum JDM1 8189807 YP_003061655.1 CDS JDM1_0069 NC_012984.1 74901 75170 D arsenate reductase 74901..75170 Lactobacillus plantarum JDM1 8189808 YP_003061656.1 CDS JDM1_0070 NC_012984.1 75490 76350 D short-chain dehydrogenase/oxidoreductase 75490..76350 Lactobacillus plantarum JDM1 8189809 YP_003061657.1 CDS JDM1_0071 NC_012984.1 76382 77227 D acetoacetate decarboxylase () 76382..77227 Lactobacillus plantarum JDM1 8189810 YP_003061658.1 CDS JDM1_0072 NC_012984.1 77255 77908 D nitroreductase 77255..77908 Lactobacillus plantarum JDM1 8189811 YP_003061659.1 CDS JDM1_0074 NC_012984.1 78077 79612 D hypothetical protein 78077..79612 Lactobacillus plantarum JDM1 8189812 YP_003061660.1 CDS JDM1_0073 NC_012984.1 79539 79760 R hypothetical protein complement(79539..79760) Lactobacillus plantarum JDM1 8189814 YP_003061661.1 CDS pgmB2 NC_012984.1 79943 80614 D beta-phosphoglucomutase 79943..80614 Lactobacillus plantarum JDM1 8189813 YP_003061662.1 CDS bsh2 NC_012984.1 80700 81716 R choloylglycine hydrolase complement(80700..81716) Lactobacillus plantarum JDM1 8189815 YP_003061663.1 CDS JDM1_0077 NC_012984.1 81989 83332 D hypothetical protein 81989..83332 Lactobacillus plantarum JDM1 8189816 YP_003061664.1 CDS ptp1 NC_012984.1 83481 84221 D protein-tyrosine-phosphatase 83481..84221 Lactobacillus plantarum JDM1 8189817 YP_003061665.1 CDS JDM1_0079 NC_012984.1 84294 85541 R 4-hydroxyphenylacetate-3-hydroxylase complement(84294..85541) Lactobacillus plantarum JDM1 8189818 YP_003061666.1 CDS JDM1_0080 NC_012984.1 85813 86313 R hypothetical protein complement(85813..86313) Lactobacillus plantarum JDM1 8189819 YP_003061667.1 CDS JDM1_0081 NC_012984.1 86406 87074 D hypothetical protein 86406..87074 Lactobacillus plantarum JDM1 8189654 YP_003061668.1 CDS JDM1_0082 NC_012984.1 87162 88118 R hypothetical protein complement(87162..88118) Lactobacillus plantarum JDM1 8189823 YP_003061669.1 CDS JDM1_0083 NC_012984.1 88200 88847 D ACP phosphodieterase 88200..88847 Lactobacillus plantarum JDM1 8189824 YP_003061670.1 CDS fusA1 NC_012984.1 89109 91127 D elongation factor G 89109..91127 Lactobacillus plantarum JDM1 8189825 YP_003061671.1 CDS JDM1_0085 NC_012984.1 91145 91831 D hypothetical protein 91145..91831 Lactobacillus plantarum JDM1 8189826 YP_003061672.1 CDS JDM1_0086 NC_012984.1 91837 92721 D transport protein 91837..92721 Lactobacillus plantarum JDM1 8189827 YP_003061673.1 CDS JDM1_0087 NC_012984.1 92920 93225 D acetyltransferase (GNAT) family 92920..93225 Lactobacillus plantarum JDM1 8189828 YP_003061674.1 CDS JDM1_0088 NC_012984.1 93297 93401 D acetyltransferase (GNAT) family 93297..93401 Lactobacillus plantarum JDM1 8189829 YP_003061675.1 CDS JDM1_0089 NC_012984.1 93431 94105 R intracellular protease/amidase () complement(93431..94105) Lactobacillus plantarum JDM1 8189830 YP_003061676.1 CDS JDM1_0090 NC_012984.1 94143 95147 R oxidoreductase complement(94143..95147) Lactobacillus plantarum JDM1 8189831 YP_003061677.1 CDS JDM1_0091 NC_012984.1 95329 95637 D transcription regulator 95329..95637 Lactobacillus plantarum JDM1 8189832 YP_003061678.1 CDS JDM1_0092 NC_012984.1 95806 97140 R cation efflux protein () complement(95806..97140) Lactobacillus plantarum JDM1 8189833 YP_003061679.1 CDS JDM1_0093 NC_012984.1 98521 98961 D prolyl aminopeptidase 98521..98961 Lactobacillus plantarum JDM1 8189834 YP_003061680.1 CDS JDM1_0094 NC_012984.1 99034 99384 D prolyl aminopeptidase 99034..99384 Lactobacillus plantarum JDM1 8189835 YP_003061681.1 CDS JDM1_0095 NC_012984.1 99566 100312 R hypothetical protein complement(99566..100312) Lactobacillus plantarum JDM1 8189836 YP_003061682.1 CDS JDM1_0096 NC_012984.1 100482 100916 D hypothetical protein 100482..100916 Lactobacillus plantarum JDM1 8189837 YP_003061683.1 CDS JDM1_0097 NC_012984.1 101019 102662 R extracellular protein, peptide binding protein OppA-like protein complement(101019..102662) Lactobacillus plantarum JDM1 8189838 YP_003061684.1 CDS JDM1_0098 NC_012984.1 103331 104080 D hypothetical protein 103331..104080 Lactobacillus plantarum JDM1 8189839 YP_003061685.1 CDS JDM1_0099 NC_012984.1 104338 105117 D adenylyl transferase 104338..105117 Lactobacillus plantarum JDM1 8189840 YP_003061686.1 CDS JDM1_0100 NC_012984.1 105185 105418 R hypothetical protein complement(105185..105418) Lactobacillus plantarum JDM1 8189841 YP_003061687.1 CDS JDM1_0101 NC_012984.1 105439 106170 R cobalt ABC transporter, ATP-binding protein () complement(105439..106170) Lactobacillus plantarum JDM1 8189842 YP_003061688.1 CDS JDM1_0102 NC_012984.1 106172 106993 R cobalt transport protein complement(106172..106993) Lactobacillus plantarum JDM1 8189843 YP_003061689.1 CDS JDM1_0103 NC_012984.1 106968 107954 R catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM complement(106968..107954) Lactobacillus plantarum JDM1 8189844 YP_003061690.1 CDS JDM1_0104 NC_012984.1 107969 108634 R transcription regulator complement(107969..108634) Lactobacillus plantarum JDM1 8189845 YP_003061691.1 CDS JDM1_0105 NC_012984.1 108887 110161 D hypothetical protein 108887..110161 Lactobacillus plantarum JDM1 8189846 YP_003061692.1 CDS JDM1_0106 NC_012984.1 110163 110903 D NCAIR mutase, PurE-related protein 110163..110903 Lactobacillus plantarum JDM1 8189847 YP_003061693.1 CDS JDM1_0107 NC_012984.1 110934 111725 D hypothetical protein 110934..111725 Lactobacillus plantarum JDM1 8189848 YP_003061694.1 CDS JDM1_0108 NC_012984.1 111764 112195 D hypothetical protein 111764..112195 Lactobacillus plantarum JDM1 8189849 YP_003061695.1 CDS glpF1 NC_012984.1 112200 112916 D glycerol uptake facilitator protein 112200..112916 Lactobacillus plantarum JDM1 8189850 YP_003061696.1 CDS JDM1_0110 NC_012984.1 112941 113771 D hypothetical protein 112941..113771 Lactobacillus plantarum JDM1 8189851 YP_003061697.1 CDS JDM1_0111 NC_012984.1 113778 113846 R hypothetical protein complement(113778..113846) Lactobacillus plantarum JDM1 8189852 YP_003061698.1 CDS JDM1_0112 NC_012984.1 113971 114948 R oxidoreductase complement(113971..114948) Lactobacillus plantarum JDM1 8189853 YP_003061699.1 CDS thiM NC_012984.1 115304 116095 D catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase 115304..116095 Lactobacillus plantarum JDM1 8189854 YP_003061700.1 CDS thiD NC_012984.1 116121 116945 D phosphomethylpyrimidine kinase 116121..116945 Lactobacillus plantarum JDM1 8189855 YP_003061701.1 CDS thiE NC_012984.1 116935 117588 D thiamine-phosphate pyrophosphorylase 116935..117588 Lactobacillus plantarum JDM1 8189856 YP_003061702.1 CDS JDM1_0116 NC_012984.1 117588 118787 D purine-cytosine transport protein 117588..118787 Lactobacillus plantarum JDM1 8189857 YP_003061703.1 CDS JDM1_0117 NC_012984.1 118869 119609 D hypothetical protein 118869..119609 Lactobacillus plantarum JDM1 8189858 YP_003061704.1 CDS JDM1_0118 NC_012984.1 119853 121445 D hypothetical protein 119853..121445 Lactobacillus plantarum JDM1 8189859 YP_003061705.1 CDS JDM1_0119 NC_012984.1 121561 122031 R NTP pyrophosphohydrolase complement(121561..122031) Lactobacillus plantarum JDM1 8189860 YP_003061706.1 CDS JDM1_0120 NC_012984.1 122264 123628 D amino acid transport protein 122264..123628 Lactobacillus plantarum JDM1 8189861 YP_003061707.1 CDS JDM1_0121 NC_012984.1 123656 124435 D hypothetical protein 123656..124435 Lactobacillus plantarum JDM1 8189862 YP_003061708.1 CDS hpo NC_012984.1 124460 125242 D halo peroxidase 124460..125242 Lactobacillus plantarum JDM1 8189863 YP_003061709.1 CDS pacL1 NC_012984.1 125438 128176 R cation transporting P-type ATPase complement(125438..128176) Lactobacillus plantarum JDM1 8189864 YP_003061710.1 CDS JDM1_0124 NC_012984.1 128575 128769 R stress-responsive transcription regulator () complement(128575..128769) Lactobacillus plantarum JDM1 8189865 YP_003061711.1 CDS JDM1_0125 NC_012984.1 128835 129437 R oxidoreductase () complement(128835..129437) Lactobacillus plantarum JDM1 8189866 YP_003061712.1 CDS JDM1_0126 NC_012984.1 129551 130024 D transcription regulator () 129551..130024 Lactobacillus plantarum JDM1 8189867 YP_003061713.1 CDS hsp1 NC_012984.1 130170 130592 D small heat shock protein 130170..130592 Lactobacillus plantarum JDM1 8189868 YP_003061714.1 CDS JDM1_0128 NC_012984.1 130680 131135 R hypothetical protein complement(130680..131135) Lactobacillus plantarum JDM1 8189869 YP_003061715.1 CDS JDM1_0129 NC_012984.1 131132 131263 R hypothetical protein complement(131132..131263) Lactobacillus plantarum JDM1 8189870 YP_003061716.1 CDS JDM1_0130 NC_012984.1 131715 132947 D transport protein 131715..132947 Lactobacillus plantarum JDM1 8189871 YP_003061717.1 CDS JDM1_0131 NC_012984.1 132972 133337 D transcription regulator 132972..133337 Lactobacillus plantarum JDM1 8189872 YP_003061718.1 CDS JDM1_0132 NC_012984.1 133402 134595 D transport protein 133402..134595 Lactobacillus plantarum JDM1 8189873 YP_003061719.1 CDS JDM1_0133 NC_012984.1 134839 135687 D oxidoreductase 134839..135687 Lactobacillus plantarum JDM1 8189874 YP_003061720.1 CDS JDM1_0134 NC_012984.1 135764 136636 D oxidoreductase 135764..136636 Lactobacillus plantarum JDM1 8189875 YP_003061721.1 CDS JDM1_0135 NC_012984.1 136736 137212 D hypothetical protein 136736..137212 Lactobacillus plantarum JDM1 8189876 YP_003061722.1 CDS JDM1_0136 NC_012984.1 137517 139226 D in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; hypothetical protein 137517..139226 Lactobacillus plantarum JDM1 8189877 YP_003061723.1 CDS JDM1_0137 NC_012984.1 139398 140210 R hypothetical protein complement(139398..140210) Lactobacillus plantarum JDM1 8189878 YP_003061724.1 CDS JDM1_0138 NC_012984.1 140617 141993 D hypothetical protein 140617..141993 Lactobacillus plantarum JDM1 8189879 YP_003061725.1 CDS JDM1_0139 NC_012984.1 142062 143189 R oxidoreductase complement(142062..143189) Lactobacillus plantarum JDM1 8189880 YP_003061726.1 CDS JDM1_0140 NC_012984.1 143422 144261 R ABC transporter permease complement(143422..144261) Lactobacillus plantarum JDM1 8189881 YP_003061727.1 CDS JDM1_0141 NC_012984.1 144263 145963 R ABC transporter ATP-binding protein complement(144263..145963) Lactobacillus plantarum JDM1 8189882 YP_003061728.1 CDS JDM1_0142 NC_012984.1 145968 146528 R hypothetical protein complement(145968..146528) Lactobacillus plantarum JDM1 8189883 YP_003061729.1 CDS JDM1_0143 NC_012984.1 146607 146825 R hypothetical protein complement(146607..146825) Lactobacillus plantarum JDM1 8189884 YP_003061730.1 CDS JDM1_0144 NC_012984.1 147100 147852 D transcription regulator 147100..147852 Lactobacillus plantarum JDM1 8189885 YP_003061731.1 CDS JDM1_0145 NC_012984.1 147997 148326 D hypothetical protein 147997..148326 Lactobacillus plantarum JDM1 8189886 YP_003061732.1 CDS JDM1_0146 NC_012984.1 148355 149140 D hypothetical protein 148355..149140 Lactobacillus plantarum JDM1 8189887 YP_003061733.1 CDS JDM1_0147 NC_012984.1 149150 149977 D hypothetical protein 149150..149977 Lactobacillus plantarum JDM1 8189888 YP_003061734.1 CDS JDM1_0148 NC_012984.1 150301 150801 D hypothetical protein 150301..150801 Lactobacillus plantarum JDM1 8189889 YP_003061735.1 CDS JDM1_0149 NC_012984.1 150970 151764 D short-chain dehydrogenase/oxidoreductase 150970..151764 Lactobacillus plantarum JDM1 8189890 YP_003061736.1 CDS JDM1_0150 NC_012984.1 152027 152944 D ABC transporter ATP-binding protein 152027..152944 Lactobacillus plantarum JDM1 8189891 YP_003061737.1 CDS JDM1_0151 NC_012984.1 152950 154566 D ABC transporter permease 152950..154566 Lactobacillus plantarum JDM1 8189892 YP_003061738.1 CDS JDM1_0152 NC_012984.1 154585 155247 D transcription regulator () 154585..155247 Lactobacillus plantarum JDM1 8189893 YP_003061739.1 CDS JDM1_0153 NC_012984.1 155414 156955 D hypothetical protein 155414..156955 Lactobacillus plantarum JDM1 8189894 YP_003061740.1 CDS JDM1_0154 NC_012984.1 157128 157640 R hypothetical protein complement(157128..157640) Lactobacillus plantarum JDM1 8189895 YP_003061741.1 CDS JDM1_0156 NC_012984.1 157870 158388 D transcription regulator () 157870..158388 Lactobacillus plantarum JDM1 8189896 YP_003061742.1 CDS dak1A NC_012984.1 158385 159374 R similar to DhaK; in Lactococcus lactis this protein froms a stable complex with DhaS and activates transcription of the dha operon in the presence of dihydroxyacetone; DhaKLM operon coactivator DhaQ complement(158385..159374) Lactobacillus plantarum JDM1 8189898 YP_003061743.1 CDS dak1B NC_012984.1 159536 160534 D with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 159536..160534 Lactobacillus plantarum JDM1 8189897 YP_003061744.1 CDS dak2 NC_012984.1 160548 161129 D dihydroxyacetone kinase phosphatase domain-containing protein 160548..161129 Lactobacillus plantarum JDM1 8189899 YP_003061745.1 CDS JDM1_0159 NC_012984.1 161126 161494 D hypothetical protein 161126..161494 Lactobacillus plantarum JDM1 8189900 YP_003061746.1 CDS gplF2 NC_012984.1 161509 162216 D glycerol uptake facilitator protein 161509..162216 Lactobacillus plantarum JDM1 8189901 YP_003061747.1 CDS JDM1_0161 NC_012984.1 162367 163386 D transcription regulator 162367..163386 Lactobacillus plantarum JDM1 8190225 YP_003061748.1 CDS JDM1_0162 NC_012984.1 163410 164372 D transcription regulator 163410..164372 Lactobacillus plantarum JDM1 8190226 YP_003061749.1 CDS agl1 NC_012984.1 164389 166062 D alpha-glucosidase 164389..166062 Lactobacillus plantarum JDM1 8190227 YP_003061750.1 CDS malE NC_012984.1 166318 167571 D maltose/maltodextrin ABC transporter, substrate binding protein 166318..167571 Lactobacillus plantarum JDM1 8190228 YP_003061751.1 CDS malF NC_012984.1 167681 168970 D maltose ABC transporter permease 167681..168970 Lactobacillus plantarum JDM1 8190229 YP_003061752.1 CDS malG NC_012984.1 168975 169859 D maltose ABC transporter permease 168975..169859 Lactobacillus plantarum JDM1 8190230 YP_003061753.1 CDS malA NC_012984.1 169887 170717 D maltose/maltodextrin ABC transporter subunit () 169887..170717 Lactobacillus plantarum JDM1 8190231 YP_003061754.1 CDS amy2 NC_012984.1 170751 172073 D alpha-amylase 170751..172073 Lactobacillus plantarum JDM1 8190232 YP_003061755.1 CDS msmK1 NC_012984.1 172175 173281 D multiple sugar ABC transporter, ATP-binding protein 172175..173281 Lactobacillus plantarum JDM1 8190233 YP_003061756.1 CDS map2 NC_012984.1 173308 175578 D maltose phosphorylase 173308..175578 Lactobacillus plantarum JDM1 8190234 YP_003061757.1 CDS JDM1_0171 NC_012984.1 175792 178638 R mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase complement(175792..178638) Lactobacillus plantarum JDM1 8190235 YP_003061758.1 CDS JDM1_0172 NC_012984.1 179225 179497 D hypothetical protein 179225..179497 Lactobacillus plantarum JDM1 8190236 YP_003061759.1 CDS sacK1 NC_012984.1 179575 180441 R fructokinase complement(179575..180441) Lactobacillus plantarum JDM1 8190237 YP_003061760.1 CDS melA NC_012984.1 180521 182680 R alpha-galactosidase complement(180521..182680) Lactobacillus plantarum JDM1 8190238 YP_003061761.1 CDS pts1BCA NC_012984.1 182700 184655 R sucrose PTS, EIIBCA complement(182700..184655) Lactobacillus plantarum JDM1 8190239 YP_003061762.1 CDS sacA NC_012984.1 184911 186416 D beta-fructofuranosidase 184911..186416 Lactobacillus plantarum JDM1 8190240 YP_003061763.1 CDS sacR NC_012984.1 186397 187377 D sucrose operon repressor 186397..187377 Lactobacillus plantarum JDM1 8190241 YP_003061764.1 CDS agl2 NC_012984.1 187398 189074 D alpha-glucosidase 187398..189074 Lactobacillus plantarum JDM1 8190242 YP_003061765.1 CDS JDM1_0179 NC_012984.1 189231 190145 R oxidoreductase complement(189231..190145) Lactobacillus plantarum JDM1 8190243 YP_003061766.1 CDS nha1 NC_012984.1 190366 191766 R Na(+)/H(+) antiporter complement(190366..191766) Lactobacillus plantarum JDM1 8190244 YP_003061767.1 CDS agl3 NC_012984.1 192312 193985 D alpha-glucosidase 192312..193985 Lactobacillus plantarum JDM1 8190245 YP_003061768.1 CDS JDM1_0182 NC_012984.1 194185 195099 R transcription regulator complement(194185..195099) Lactobacillus plantarum JDM1 8190246 YP_003061769.1 CDS JDM1_0183 NC_012984.1 196085 198853 D cell surface protein precursor 196085..198853 Lactobacillus plantarum JDM1 8190247 YP_003061770.1 CDS JDM1_0184 NC_012984.1 199144 199986 R hypothetical protein complement(199144..199986) Lactobacillus plantarum JDM1 8190248 YP_003061771.1 CDS JDM1_0185 NC_012984.1 200174 201835 R lipoprotein precursor, peptide binding protein OppA-like protein complement(200174..201835) Lactobacillus plantarum JDM1 8190249 YP_003061772.1 CDS JDM1_0186 NC_012984.1 202041 203702 R lipoprotein precursor, peptide binding protein OppA-like protein complement(202041..203702) Lactobacillus plantarum JDM1 8190250 YP_003061773.1 CDS JDM1_0187 NC_012984.1 203855 204298 R acetyltransferase () complement(203855..204298) Lactobacillus plantarum JDM1 8190251 YP_003061774.1 CDS serA1 NC_012984.1 204295 205473 R phosphoglycerate dehydrogenase complement(204295..205473) Lactobacillus plantarum JDM1 8190252 YP_003061775.1 CDS serC NC_012984.1 205488 206561 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(205488..206561) Lactobacillus plantarum JDM1 8190253 YP_003061776.1 CDS pgm1 NC_012984.1 206945 207568 D phosphoglycerate mutase () 206945..207568 Lactobacillus plantarum JDM1 8190254 YP_003061777.1 CDS JDM1_0191 NC_012984.1 207826 208818 D Aryl-alcohol dehydrogenase family enzyme 207826..208818 Lactobacillus plantarum JDM1 8190255 YP_003061778.1 CDS JDM1_0192 NC_012984.1 209320 209541 D hypothetical protein 209320..209541 Lactobacillus plantarum JDM1 8190256 YP_003061779.1 CDS JDM1_0193 NC_012984.1 209544 209774 R hypothetical protein complement(209544..209774) Lactobacillus plantarum JDM1 8190257 YP_003061780.1 CDS JDM1_0194 NC_012984.1 209877 210749 R fibronectin-binding protein complement(209877..210749) Lactobacillus plantarum JDM1 8190258 YP_003061781.1 CDS ack1 NC_012984.1 210925 212112 D acetate kinase 210925..212112 Lactobacillus plantarum JDM1 8190259 YP_003061782.1 CDS JDM1_0196 NC_012984.1 212167 212418 R hypothetical protein complement(212167..212418) Lactobacillus plantarum JDM1 8190260 YP_003061783.1 CDS JDM1_0197 NC_012984.1 212231 212422 D hypothetical protein 212231..212422 Lactobacillus plantarum JDM1 8190261 YP_003061784.1 CDS JDM1_0198 NC_012984.1 212561 212911 R hypothetical protein complement(212561..212911) Lactobacillus plantarum JDM1 8190262 YP_003061785.1 CDS JDM1_0199 NC_012984.1 212911 213294 R hypothetical protein complement(212911..213294) Lactobacillus plantarum JDM1 8190263 YP_003061786.1 CDS JDM1_0200 NC_012984.1 213595 215115 D ABC transporter ATP-binding protein 213595..215115 Lactobacillus plantarum JDM1 8190264 YP_003061787.1 CDS JDM1_0201 NC_012984.1 215236 215883 R ABC transporter permease complement(215236..215883) Lactobacillus plantarum JDM1 8190265 YP_003061788.1 CDS JDM1_0202 NC_012984.1 215892 217298 R ABC transporter ATP-binding protein complement(215892..217298) Lactobacillus plantarum JDM1 8190266 YP_003061789.1 CDS JDM1_0203 NC_012984.1 217328 217897 R ABC transporter complement(217328..217897) Lactobacillus plantarum JDM1 8190267 YP_003061790.1 CDS gpo NC_012984.1 218238 218723 D glutathione peroxidase 218238..218723 Lactobacillus plantarum JDM1 8190268 YP_003061791.1 CDS JDM1_0205 NC_012984.1 218774 219604 D oxidoreductase 218774..219604 Lactobacillus plantarum JDM1 8190269 YP_003061792.1 CDS greA NC_012984.1 220108 220578 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(220108..220578) Lactobacillus plantarum JDM1 8190270 YP_003061793.1 CDS JDM1_0207 NC_012984.1 220664 221077 R hypothetical protein complement(220664..221077) Lactobacillus plantarum JDM1 8190271 YP_003061794.1 CDS JDM1_0208 NC_012984.1 221090 221293 R transcription regulator complement(221090..221293) Lactobacillus plantarum JDM1 8190272 YP_003061795.1 CDS gnp NC_012984.1 221673 222386 D glucosamine-6-phosphate isomerase 221673..222386 Lactobacillus plantarum JDM1 8190273 YP_003061796.1 CDS JDM1_0210 NC_012984.1 222476 223684 R hypothetical protein complement(222476..223684) Lactobacillus plantarum JDM1 8190274 YP_003061797.1 CDS JDM1_0211 NC_012984.1 223730 225235 R fumarate reductase/succinate dehydrogenase flavoprotein domain protein complement(223730..225235) Lactobacillus plantarum JDM1 8190275 YP_003061798.1 CDS JDM1_0212 NC_012984.1 225362 226282 D AraC family transcriptional regulator 225362..226282 Lactobacillus plantarum JDM1 8190276 YP_003061799.1 CDS pepD1 NC_012984.1 226339 227754 R dipeptidase complement(226339..227754) Lactobacillus plantarum JDM1 8190277 YP_003061800.1 CDS pts2CB NC_012984.1 228116 229954 D mannitol PTS, EIICB 228116..229954 Lactobacillus plantarum JDM1 8190278 YP_003061801.1 CDS mtlR NC_012984.1 229991 232066 D transcription regulator, mannitol operon 229991..232066 Lactobacillus plantarum JDM1 8190279 YP_003061802.1 CDS pts2A NC_012984.1 232081 232530 D mannitol PTS, EIIA 232081..232530 Lactobacillus plantarum JDM1 8190280 YP_003061803.1 CDS mtlD NC_012984.1 232532 233689 D mannitol-1-phosphate 5-dehydrogenase 232532..233689 Lactobacillus plantarum JDM1 8190281 YP_003061804.1 CDS JDM1_0218 NC_012984.1 233946 234497 R hypothetical protein complement(233946..234497) Lactobacillus plantarum JDM1 8190282 YP_003061805.1 CDS trxA1 NC_012984.1 234678 235010 D thioredoxin 234678..235010 Lactobacillus plantarum JDM1 8190283 YP_003061806.1 CDS JDM1_0220 NC_012984.1 235105 235431 R hypothetical protein complement(235105..235431) Lactobacillus plantarum JDM1 8190284 YP_003061807.1 CDS JDM1_0221 NC_012984.1 235721 236275 D hypothetical protein 235721..236275 Lactobacillus plantarum JDM1 8190285 YP_003061808.1 CDS JDM1_0222 NC_012984.1 236340 236741 R hypothetical protein complement(236340..236741) Lactobacillus plantarum JDM1 8190286 YP_003061809.1 CDS ndk NC_012984.1 236983 237447 R nucleoside-diphosphate kinase complement(236983..237447) Lactobacillus plantarum JDM1 8190287 YP_003061810.1 CDS JDM1_0224 NC_012984.1 237682 239028 D hypothetical protein 237682..239028 Lactobacillus plantarum JDM1 8190288 YP_003061811.1 CDS JDM1_0225 NC_012984.1 239220 239876 D oxidoreductase () 239220..239876 Lactobacillus plantarum JDM1 8190289 YP_003061812.1 CDS cysE NC_012984.1 240016 240558 R serine O-acetyltransferase complement(240016..240558) Lactobacillus plantarum JDM1 8190290 YP_003061813.1 CDS metC1 NC_012984.1 240563 241708 R cystathionine beta-lyase complement(240563..241708) Lactobacillus plantarum JDM1 8190291 YP_003061814.1 CDS cysK NC_012984.1 241720 242631 R cysteine synthase complement(241720..242631) Lactobacillus plantarum JDM1 8190292 YP_003061815.1 CDS pepM NC_012984.1 243244 244035 R methionyl aminopeptidase complement(243244..244035) Lactobacillus plantarum JDM1 8190293 YP_003061816.1 CDS JDM1_0230 NC_012984.1 244071 244364 R hypothetical protein complement(244071..244364) Lactobacillus plantarum JDM1 8190294 YP_003061817.1 CDS JDM1_0231 NC_012984.1 244397 245185 D hypothetical protein 244397..245185 Lactobacillus plantarum JDM1 8190295 YP_003061818.1 CDS JDM1_0232 NC_012984.1 245384 245662 D hypothetical protein 245384..245662 Lactobacillus plantarum JDM1 8190296 YP_003061819.1 CDS JDM1_0233 NC_012984.1 245655 245942 D hypothetical protein 245655..245942 Lactobacillus plantarum JDM1 8190297 YP_003061820.1 CDS treR NC_012984.1 246258 246977 D transcription regulator 246258..246977 Lactobacillus plantarum JDM1 8190298 YP_003061821.1 CDS treA NC_012984.1 247002 248645 D alpha, alpha-phosphotrehalase 247002..248645 Lactobacillus plantarum JDM1 8190299 YP_003061822.1 CDS pts4ABC NC_012984.1 248662 250659 D beta-glucosides PTS, EIIABC 248662..250659 Lactobacillus plantarum JDM1 8190300 YP_003061823.1 CDS pts5ABC NC_012984.1 250879 252849 D beta-glucosides PTS, EIIABC 250879..252849 Lactobacillus plantarum JDM1 8190301 YP_003061824.1 CDS JDM1_0238 NC_012984.1 252891 253673 R hypothetical protein complement(252891..253673) Lactobacillus plantarum JDM1 8190302 YP_003061825.1 CDS vdcB NC_012984.1 253920 254483 D 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 253920..254483 Lactobacillus plantarum JDM1 8190303 YP_003061826.1 CDS JDM1_0240 NC_012984.1 254486 254896 D hypothetical protein 254486..254896 Lactobacillus plantarum JDM1 8190304 YP_003061827.1 CDS JDM1_0241 NC_012984.1 255187 255627 R transcription regulator () complement(255187..255627) Lactobacillus plantarum JDM1 8190305 YP_003061828.1 CDS JDM1_0242 NC_012984.1 255812 256501 D transcription regulator () 255812..256501 Lactobacillus plantarum JDM1 8188068 YP_003061829.1 CDS mntH1 NC_012984.1 256672 258066 D manganese transport protein MntH 256672..258066 Lactobacillus plantarum JDM1 8188069 YP_003061830.1 CDS JDM1_0244 NC_012984.1 258198 258845 R hypothetical protein complement(258198..258845) Lactobacillus plantarum JDM1 8188070 YP_003061831.1 CDS JDM1_0245 NC_012984.1 258901 259206 R hypothetical protein complement(258901..259206) Lactobacillus plantarum JDM1 8188071 YP_003061832.1 CDS JDM1_0246 NC_012984.1 259247 259498 R hypothetical protein complement(259247..259498) Lactobacillus plantarum JDM1 8188072 YP_003061833.1 CDS JDM1_0247 NC_012984.1 259799 261199 R transport protein complement(259799..261199) Lactobacillus plantarum JDM1 8188073 YP_003061834.1 CDS JDM1_0248 NC_012984.1 261291 261683 D transcription regulator 261291..261683 Lactobacillus plantarum JDM1 8188074 YP_003061835.1 CDS hpk2 NC_012984.1 261835 263211 R histidine protein kinase; sensor protein complement(261835..263211) Lactobacillus plantarum JDM1 8188075 YP_003061836.1 CDS rrp2 NC_012984.1 263198 263902 R response regulator complement(263198..263902) Lactobacillus plantarum JDM1 8188076 YP_003061837.1 CDS JDM1_0251 NC_012984.1 264059 264355 D hypothetical protein 264059..264355 Lactobacillus plantarum JDM1 8188077 YP_003061838.1 CDS JDM1_0252 NC_012984.1 264436 265167 D transcription regulator 264436..265167 Lactobacillus plantarum JDM1 8188078 YP_003061839.1 CDS pts6C NC_012984.1 265469 266794 D cellobiose PTS, EIIC 265469..266794 Lactobacillus plantarum JDM1 8188079 YP_003061840.1 CDS JDM1_0254 NC_012984.1 266947 267258 R hypothetical protein complement(266947..267258) Lactobacillus plantarum JDM1 8188080 YP_003061841.1 CDS JDM1_0255 NC_012984.1 267487 267741 D hypothetical protein 267487..267741 Lactobacillus plantarum JDM1 8188081 YP_003061842.1 CDS JDM1_0256 NC_012984.1 267896 268927 R transcription regulator complement(267896..268927) Lactobacillus plantarum JDM1 8188082 YP_003061843.1 CDS JDM1_0257 NC_012984.1 269200 270594 D oxidoreductase 269200..270594 Lactobacillus plantarum JDM1 8188083 YP_003061844.1 CDS JDM1_0258 NC_012984.1 270741 271046 D hypothetical protein 270741..271046 Lactobacillus plantarum JDM1 8188084 YP_003061845.1 CDS JDM1_0259 NC_012984.1 271091 271783 D GTP pyrophosphokinase 271091..271783 Lactobacillus plantarum JDM1 8188085 YP_003061846.1 CDS JDM1_0260 NC_012984.1 272039 272611 R transcription regulator () complement(272039..272611) Lactobacillus plantarum JDM1 8188086 YP_003061847.1 CDS JDM1_0261 NC_012984.1 272792 276745 D transport protein 272792..276745 Lactobacillus plantarum JDM1 8188087 YP_003061848.1 CDS tag1 NC_012984.1 276925 277488 D DNA-3-methyladenine glycosylase I 276925..277488 Lactobacillus plantarum JDM1 8188088 YP_003061849.1 CDS JDM1_0263 NC_012984.1 277729 279786 D hypothetical protein 277729..279786 Lactobacillus plantarum JDM1 8188089 YP_003061850.1 CDS JDM1_0264 NC_012984.1 280109 281587 D ABC transporter permease 280109..281587 Lactobacillus plantarum JDM1 8188090 YP_003061851.1 CDS JDM1_0265 NC_012984.1 281599 282258 D ABC transporter ATP-binding protein 281599..282258 Lactobacillus plantarum JDM1 8188091 YP_003061852.1 CDS JDM1_0266 NC_012984.1 282387 283148 R CAAX family protease complement(282387..283148) Lactobacillus plantarum JDM1 8188092 YP_003061853.1 CDS JDM1_0267 NC_012984.1 283244 283963 R CAAX family protease complement(283244..283963) Lactobacillus plantarum JDM1 8188093 YP_003061854.1 CDS JDM1_0268 NC_012984.1 284086 284889 R hypothetical protein complement(284086..284889) Lactobacillus plantarum JDM1 8188094 YP_003061855.1 CDS JDM1_0269 NC_012984.1 285940 286575 R hypothetical protein complement(285940..286575) Lactobacillus plantarum JDM1 8188095 YP_003061856.1 CDS gcsH1 NC_012984.1 286980 287279 R glycine cleavage system, H protein complement(286980..287279) Lactobacillus plantarum JDM1 8188096 YP_003061857.1 CDS JDM1_0271 NC_012984.1 287364 288281 R hypothetical protein complement(287364..288281) Lactobacillus plantarum JDM1 8188097 YP_003061858.1 CDS JDM1_0272 NC_012984.1 288278 288994 R hypothetical protein complement(288278..288994) Lactobacillus plantarum JDM1 8188098 YP_003061859.1 CDS JDM1_0273 NC_012984.1 288994 291363 R DNA helicase () complement(288994..291363) Lactobacillus plantarum JDM1 8188099 YP_003061860.1 CDS JDM1_0274 NC_012984.1 291783 292145 R hypothetical protein complement(291783..292145) Lactobacillus plantarum JDM1 8188100 YP_003061861.1 CDS ack2 NC_012984.1 292334 293530 D acetate kinase 292334..293530 Lactobacillus plantarum JDM1 8188101 YP_003061862.1 CDS JDM1_0276 NC_012984.1 293656 294099 R acetyltransferase () complement(293656..294099) Lactobacillus plantarum JDM1 8188102 YP_003061863.1 CDS JDM1_0277 NC_012984.1 294173 294595 D transcription regulator 294173..294595 Lactobacillus plantarum JDM1 8188103 YP_003061864.1 CDS ndh1 NC_012984.1 294784 295986 D NADH dehydrogenase 294784..295986 Lactobacillus plantarum JDM1 8188104 YP_003061865.1 CDS JDM1_0279 NC_012984.1 296118 296450 D hypothetical protein 296118..296450 Lactobacillus plantarum JDM1 8188105 YP_003061866.1 CDS potD NC_012984.1 296550 297620 R spermidine/putrescine ABC transporter, substrate binding protein complement(296550..297620) Lactobacillus plantarum JDM1 8188106 YP_003061867.1 CDS potC NC_012984.1 297617 298432 R spermidine/putrescine ABC transporter permease complement(297617..298432) Lactobacillus plantarum JDM1 8188107 YP_003061868.1 CDS potB NC_012984.1 298432 299265 R spermidine/putrescine ABC transporter permease complement(298432..299265) Lactobacillus plantarum JDM1 8188108 YP_003061869.1 CDS potA NC_012984.1 299277 300374 R spermidine/putrescine ABC transporter ATP-binding protein complement(299277..300374) Lactobacillus plantarum JDM1 8188109 YP_003061870.1 CDS JDM1_0284 NC_012984.1 300445 300987 R transcription regulator complement(300445..300987) Lactobacillus plantarum JDM1 8188110 YP_003061871.1 CDS JDM1_0285 NC_012984.1 301455 301931 R hypothetical protein complement(301455..301931) Lactobacillus plantarum JDM1 8188111 YP_003061872.1 CDS JDM1_0286 NC_012984.1 302109 302594 D acetyltransferase () 302109..302594 Lactobacillus plantarum JDM1 8188112 YP_003061873.1 CDS JDM1_0287 NC_012984.1 302598 303125 D acetyltransferase () 302598..303125 Lactobacillus plantarum JDM1 8188113 YP_003061874.1 CDS JDM1_0288 NC_012984.1 303219 303404 D hypothetical protein 303219..303404 Lactobacillus plantarum JDM1 8188114 YP_003061875.1 CDS JDM1_0289 NC_012984.1 303665 304018 D transcription regulator 303665..304018 Lactobacillus plantarum JDM1 8188115 YP_003061876.1 CDS JDM1_0290 NC_012984.1 304018 304911 D ABC transporter ATP-binding protein 304018..304911 Lactobacillus plantarum JDM1 8188116 YP_003061877.1 CDS JDM1_0291 NC_012984.1 304924 305937 D hypothetical protein 304924..305937 Lactobacillus plantarum JDM1 8188117 YP_003061878.1 CDS acdH NC_012984.1 306043 307410 R acetaldehyde dehydrogenase complement(306043..307410) Lactobacillus plantarum JDM1 8188118 YP_003061879.1 CDS fba NC_012984.1 307836 308699 D fructose-bisphosphate aldolase 307836..308699 Lactobacillus plantarum JDM1 8188119 YP_003061880.1 CDS JDM1_0294 NC_012984.1 308992 310308 R sugar transport protein complement(308992..310308) Lactobacillus plantarum JDM1 8188120 YP_003061881.1 CDS JDM1_0295 NC_012984.1 310478 311380 R hypothetical protein complement(310478..311380) Lactobacillus plantarum JDM1 8188121 YP_003061882.1 CDS JDM1_0296 NC_012984.1 311393 311593 R hypothetical protein complement(311393..311593) Lactobacillus plantarum JDM1 8188122 YP_003061883.1 CDS pepD2 NC_012984.1 312276 313688 D dipeptidase 312276..313688 Lactobacillus plantarum JDM1 8188123 YP_003061884.1 CDS JDM1_0298 NC_012984.1 313754 313999 D hypothetical protein 313754..313999 Lactobacillus plantarum JDM1 8188124 YP_003061885.1 CDS JDM1_0299 NC_012984.1 314128 314691 D hypothetical protein 314128..314691 Lactobacillus plantarum JDM1 8188125 YP_003061886.1 CDS birA1 NC_012984.1 314729 315700 D biotin-(acetyl-CoA-carboxylase)ligase and biotin operon repressor 314729..315700 Lactobacillus plantarum JDM1 8188126 YP_003061887.1 CDS JDM1_0300 NC_012984.1 315689 315964 R hypothetical protein complement(315689..315964) Lactobacillus plantarum JDM1 8188128 YP_003061888.1 CDS JDM1_0302 NC_012984.1 316435 317253 D amino acid ABC transporter substrate-binding protein 316435..317253 Lactobacillus plantarum JDM1 8188127 YP_003061889.1 CDS JDM1_0303 NC_012984.1 317266 318294 D amino acid ABC transporter ATP-binding protein 317266..318294 Lactobacillus plantarum JDM1 8188129 YP_003061890.1 CDS JDM1_0304 NC_012984.1 318287 318949 D hypothetical protein 318287..318949 Lactobacillus plantarum JDM1 8188130 YP_003061891.1 CDS panE2 NC_012984.1 318970 319953 D 2-dehydropantoate 2-reductase 318970..319953 Lactobacillus plantarum JDM1 8188131 YP_003061892.1 CDS JDM1_0306 NC_012984.1 319956 321131 D produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; transaminase 319956..321131 Lactobacillus plantarum JDM1 8188132 YP_003061893.1 CDS JDM1_0307 NC_012984.1 321307 322473 R hypothetical protein complement(321307..322473) Lactobacillus plantarum JDM1 8188133 YP_003061894.1 CDS tagG NC_012984.1 323068 323883 D teichoic acid ABC transporter, permease protein 323068..323883 Lactobacillus plantarum JDM1 8188134 YP_003061895.1 CDS tagH NC_012984.1 323896 324987 D teichoic acid ABC transporter, ATP-binding protein 323896..324987 Lactobacillus plantarum JDM1 8188135 YP_003061896.1 CDS JDM1_0310 NC_012984.1 325366 325638 D hypothetical protein 325366..325638 Lactobacillus plantarum JDM1 8188136 YP_003061897.1 CDS JDM1_0311 NC_012984.1 325865 326407 D transcription regulator () 325865..326407 Lactobacillus plantarum JDM1 8188137 YP_003061898.1 CDS JDM1_0312 NC_012984.1 326404 327849 D transport protein 326404..327849 Lactobacillus plantarum JDM1 8188138 YP_003061899.1 CDS amtB NC_012984.1 328177 329493 R ammonium transporter complement(328177..329493) Lactobacillus plantarum JDM1 8188139 YP_003061900.1 CDS hicD1 NC_012984.1 329990 330949 D L-2-hydroxyisocaproate dehydrogenase 329990..330949 Lactobacillus plantarum JDM1 8188140 YP_003061901.1 CDS JDM1_0315 NC_012984.1 331052 331321 D hypothetical protein 331052..331321 Lactobacillus plantarum JDM1 8188141 YP_003061902.1 CDS zmp1 NC_012984.1 331551 332114 R extracellular zinc metalloproteinase () complement(331551..332114) Lactobacillus plantarum JDM1 8188142 YP_003061903.1 CDS rpiA2 NC_012984.1 332308 332976 D ribose 5-phosphate epimerase 332308..332976 Lactobacillus plantarum JDM1 8188143 YP_003061904.1 CDS sufI NC_012984.1 333126 334631 D cell division protein SufI 333126..334631 Lactobacillus plantarum JDM1 8188144 YP_003061905.1 CDS JDM1_0319 NC_012984.1 334896 335264 D hypothetical protein 334896..335264 Lactobacillus plantarum JDM1 8188145 YP_003061906.1 CDS JDM1_0320 NC_012984.1 335377 335886 R hypothetical protein complement(335377..335886) Lactobacillus plantarum JDM1 8188146 YP_003061907.1 CDS JDM1_0321 NC_012984.1 335917 337113 R hypothetical protein complement(335917..337113) Lactobacillus plantarum JDM1 8188147 YP_003061908.1 CDS JDM1_0322 NC_012984.1 337208 337693 D transcription regulator () 337208..337693 Lactobacillus plantarum JDM1 8188148 YP_003061909.1 CDS JDM1_0323 NC_012984.1 337712 338167 D hypothetical protein 337712..338167 Lactobacillus plantarum JDM1 8188476 YP_003061910.1 CDS accB3 NC_012984.1 338271 338843 D acetyl-CoA carboxylase, biotin carboxyl carrier protein 338271..338843 Lactobacillus plantarum JDM1 8188559 YP_003061911.1 CDS JDM1_0325 NC_012984.1 339009 339929 R catalyzes the hydrolysis of both purine and pyrimidine ribonucleosides; ribonucleoside hydrolase RihC complement(339009..339929) Lactobacillus plantarum JDM1 8188560 YP_003061912.1 CDS JDM1_0326 NC_012984.1 340066 340965 D short chain dehydrogenase 340066..340965 Lactobacillus plantarum JDM1 8188561 YP_003061913.1 CDS JDM1_0327 NC_012984.1 341405 343285 D hypothetical protein 341405..343285 Lactobacillus plantarum JDM1 8188562 YP_003061914.1 CDS JDM1_0328 NC_012984.1 343457 343903 R hypothetical protein complement(343457..343903) Lactobacillus plantarum JDM1 8188563 YP_003061915.1 CDS choS NC_012984.1 344141 345667 D glycine betaine/carnitine/choline ABC transporter, substrate binding and permease protein 344141..345667 Lactobacillus plantarum JDM1 8188564 YP_003061916.1 CDS choQ NC_012984.1 345668 346639 D glycine/betaine/carnitine/choline ABC transporter ATP-binding protein 345668..346639 Lactobacillus plantarum JDM1 8188565 YP_003061917.1 CDS gshR1 NC_012984.1 346717 348048 D glutathione reductase 346717..348048 Lactobacillus plantarum JDM1 8188566 YP_003061918.1 CDS glpK NC_012984.1 348514 350031 D Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 348514..350031 Lactobacillus plantarum JDM1 8188567 YP_003061919.1 CDS glpD NC_012984.1 350046 351875 D glycerol-3-phosphate dehydrogenase 350046..351875 Lactobacillus plantarum JDM1 8188568 YP_003061920.1 CDS glpF3 NC_012984.1 351890 352612 D glycerol uptake facilitator protein 351890..352612 Lactobacillus plantarum JDM1 8188569 YP_003061921.1 CDS JDM1_0335 NC_012984.1 353199 356882 D cell surface protein precursor () 353199..356882 Lactobacillus plantarum JDM1 8188570 YP_003061922.1 CDS JDM1_0336 NC_012984.1 356884 358758 D hypothetical protein 356884..358758 Lactobacillus plantarum JDM1 8188571 YP_003061923.1 CDS JDM1_0337 NC_012984.1 358764 359306 D hypothetical protein 358764..359306 Lactobacillus plantarum JDM1 8188572 YP_003061924.1 CDS JDM1_0338 NC_012984.1 359321 359584 D hypothetical protein 359321..359584 Lactobacillus plantarum JDM1 8188573 YP_003061925.1 CDS JDM1_0339 NC_012984.1 359696 359971 D hypothetical protein 359696..359971 Lactobacillus plantarum JDM1 8188574 YP_003061926.1 CDS thgA1 NC_012984.1 360354 360971 R galactoside O-acetyltransferase complement(360354..360971) Lactobacillus plantarum JDM1 8188575 YP_003061927.1 CDS JDM1_0341 NC_012984.1 360975 362129 R transport protein complement(360975..362129) Lactobacillus plantarum JDM1 8188576 YP_003061928.1 CDS JDM1_0342 NC_012984.1 362133 362924 R HAD superfamily hydrolase complement(362133..362924) Lactobacillus plantarum JDM1 8188577 YP_003061929.1 CDS JDM1_0343 NC_012984.1 362995 363867 R transcription regulator complement(362995..363867) Lactobacillus plantarum JDM1 8188578 YP_003061930.1 CDS JDM1_0344 NC_012984.1 364027 364842 D HAD superfamily hydrolase 364027..364842 Lactobacillus plantarum JDM1 8188579 YP_003061931.1 CDS brnQ1 NC_012984.1 365368 366744 D branched-chain amino acid transport protein 365368..366744 Lactobacillus plantarum JDM1 8188580 YP_003061932.1 CDS napA1 NC_012984.1 366789 367973 D Na(+)/H(+) antiporter 366789..367973 Lactobacillus plantarum JDM1 8188581 YP_003061933.1 CDS JDM1_0347 NC_012984.1 368361 368564 D hypothetical protein 368361..368564 Lactobacillus plantarum JDM1 8188582 YP_003061934.1 CDS plnL NC_012984.1 368936 369604 R immunity protein PlnL complement(368936..369604) Lactobacillus plantarum JDM1 8188583 YP_003061935.1 CDS plnB NC_012984.1 370348 371688 D histidine protein kinase PlnB; sensor protein 370348..371688 Lactobacillus plantarum JDM1 8188584 YP_003061936.1 CDS plnD NC_012984.1 371689 372432 D response regulator PlnD, repressor 371689..372432 Lactobacillus plantarum JDM1 8188585 YP_003061937.1 CDS plnI NC_012984.1 372726 373499 R immunity protein PlnI complement(372726..373499) Lactobacillus plantarum JDM1 8188586 YP_003061938.1 CDS plnF NC_012984.1 373598 373756 R bacteriocin precursor peptide PlnF () complement(373598..373756) Lactobacillus plantarum JDM1 8188587 YP_003061939.1 CDS plnE NC_012984.1 373781 373951 R bacteriocin precursor peptide PlnE () complement(373781..373951) Lactobacillus plantarum JDM1 8188588 YP_003061940.1 CDS plnG NC_012984.1 374218 376368 D bacteriocin ABC-transporter, ATP-binding and permease protein PlnG 374218..376368 Lactobacillus plantarum JDM1 8188589 YP_003061941.1 CDS plnH NC_012984.1 376384 377760 D bacteriocin ABC transporter, accessory factor PlnH 376384..377760 Lactobacillus plantarum JDM1 8188590 YP_003061942.1 CDS plnT NC_012984.1 377850 378539 D integral membrane protein PlnT 377850..378539 Lactobacillus plantarum JDM1 8188591 YP_003061943.1 CDS plnU NC_012984.1 378820 379275 D integral membrane protein PlnU, membrane-bound protease CAAX family 378820..379275 Lactobacillus plantarum JDM1 8188592 YP_003061944.1 CDS plnV NC_012984.1 379362 380042 D integral membrane protein plnV 379362..380042 Lactobacillus plantarum JDM1 8188593 YP_003061945.1 CDS plnW NC_012984.1 380136 380810 D integral membrane protein PlnW 380136..380810 Lactobacillus plantarum JDM1 8188594 YP_003061946.1 CDS plnX NC_012984.1 381021 381248 D plantaricin biosynthesis protein PlnX () 381021..381248 Lactobacillus plantarum JDM1 8188595 YP_003061947.1 CDS plnY NC_012984.1 381260 381553 D plantaricin biosynthesis protein PlnY () 381260..381553 Lactobacillus plantarum JDM1 8188596 YP_003061948.1 CDS JDM1_0362 NC_012984.1 381843 384152 R DNA helicase () complement(381843..384152) Lactobacillus plantarum JDM1 8188597 YP_003061949.1 CDS JDM1_0363 NC_012984.1 384411 385187 D hypothetical protein 384411..385187 Lactobacillus plantarum JDM1 8188598 YP_003061950.1 CDS trpS NC_012984.1 385626 386642 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 385626..386642 Lactobacillus plantarum JDM1 8188599 YP_003061951.1 CDS JDM1_0365 NC_012984.1 387048 387758 D transcription regulator 387048..387758 Lactobacillus plantarum JDM1 8188600 YP_003061952.1 CDS pts7C NC_012984.1 387831 389192 D cellobiose PTS, EIIC 387831..389192 Lactobacillus plantarum JDM1 8188601 YP_003061953.1 CDS JDM1_0367 NC_012984.1 389199 389387 D hypothetical protein 389199..389387 Lactobacillus plantarum JDM1 8188602 YP_003061954.1 CDS JDM1_0368 NC_012984.1 389377 389799 D hypothetical protein 389377..389799 Lactobacillus plantarum JDM1 8188603 YP_003061955.1 CDS pts8C NC_012984.1 390022 391377 D cellobiose PTS, EIIC 390022..391377 Lactobacillus plantarum JDM1 8188604 YP_003061956.1 CDS pbg1 NC_012984.1 391395 392831 D 6-phospho-beta-glucosidase 391395..392831 Lactobacillus plantarum JDM1 8188605 YP_003061957.1 CDS JDM1_0371 NC_012984.1 392952 393848 D sugar kinase and transcription regulator 392952..393848 Lactobacillus plantarum JDM1 8188606 YP_003061958.1 CDS JDM1_0372 NC_012984.1 393998 394744 D transcription regulator 393998..394744 Lactobacillus plantarum JDM1 8188607 YP_003061959.1 CDS JDM1_0373 NC_012984.1 394857 395870 D hypothetical protein 394857..395870 Lactobacillus plantarum JDM1 8188608 YP_003061960.1 CDS ppx1 NC_012984.1 396312 397229 D exopolyphosphatase 396312..397229 Lactobacillus plantarum JDM1 8188609 YP_003061961.1 CDS mvaA NC_012984.1 397275 398549 D hydroxymethylglutaryl-CoA reductase 397275..398549 Lactobacillus plantarum JDM1 8188610 YP_003061962.1 CDS JDM1_0376 NC_012984.1 398542 399501 D hypothetical protein 398542..399501 Lactobacillus plantarum JDM1 8188611 YP_003061963.1 CDS JDM1_0377 NC_012984.1 399523 400227 D Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 399523..400227 Lactobacillus plantarum JDM1 8188612 YP_003061964.1 CDS JDM1_0378 NC_012984.1 400227 401069 D hypothetical protein 400227..401069 Lactobacillus plantarum JDM1 8188613 YP_003061965.1 CDS JDM1_0379 NC_012984.1 401667 402056 D hypothetical protein 401667..402056 Lactobacillus plantarum JDM1 8188614 YP_003061966.1 CDS metS NC_012984.1 402378 404429 D methionine-tRNA ligase 402378..404429 Lactobacillus plantarum JDM1 8188615 YP_003061967.1 CDS JDM1_0381 NC_012984.1 404662 405459 D transport protein 404662..405459 Lactobacillus plantarum JDM1 8188616 YP_003061968.1 CDS JDM1_0382 NC_012984.1 405459 405845 D transport protein 405459..405845 Lactobacillus plantarum JDM1 8188617 YP_003061969.1 CDS JDM1_0383 NC_012984.1 405879 406769 R hypothetical protein complement(405879..406769) Lactobacillus plantarum JDM1 8188618 YP_003061970.1 CDS JDM1_0384 NC_012984.1 407332 407820 D hypothetical protein 407332..407820 Lactobacillus plantarum JDM1 8188619 YP_003061971.1 CDS JDM1_0385 NC_012984.1 408072 408848 D DNAse () 408072..408848 Lactobacillus plantarum JDM1 8188620 YP_003061972.1 CDS JDM1_0386 NC_012984.1 408835 409398 D hypothetical protein 408835..409398 Lactobacillus plantarum JDM1 8188621 YP_003061973.1 CDS ksgA NC_012984.1 409395 410285 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 409395..410285 Lactobacillus plantarum JDM1 8188622 YP_003061974.1 CDS JDM1_0388 NC_012984.1 410390 410641 D hypothetical protein 410390..410641 Lactobacillus plantarum JDM1 8188623 YP_003061975.1 CDS ipk NC_012984.1 410774 411640 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 410774..411640 Lactobacillus plantarum JDM1 8188624 YP_003061976.1 CDS JDM1_0390 NC_012984.1 411722 411859 R hypothetical protein complement(411722..411859) Lactobacillus plantarum JDM1 8188625 YP_003061977.1 CDS JDM1_0391 NC_012984.1 411950 412894 D cell surface hydrolase, membrane-bound () 411950..412894 Lactobacillus plantarum JDM1 8188626 YP_003061978.1 CDS JDM1_0392 NC_012984.1 413162 413860 D zinc/iron ABC transporter, ATP-binding protein 413162..413860 Lactobacillus plantarum JDM1 8188627 YP_003061979.1 CDS JDM1_0393 NC_012984.1 413847 414650 D zinc/iron ABC transporter, permease protein 413847..414650 Lactobacillus plantarum JDM1 8188628 YP_003061980.1 CDS purR NC_012984.1 415006 415842 D pur operon repressor 415006..415842 Lactobacillus plantarum JDM1 8188629 YP_003061981.1 CDS glmU NC_012984.1 415911 417293 D forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 415911..417293 Lactobacillus plantarum JDM1 8188630 YP_003061982.1 CDS bla1 NC_012984.1 417529 418353 D beta-lactamase 417529..418353 Lactobacillus plantarum JDM1 8188631 YP_003061983.1 CDS prs1 NC_012984.1 418719 419699 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 418719..419699 Lactobacillus plantarum JDM1 8188632 YP_003061984.1 CDS JDM1_0398 NC_012984.1 419988 421010 D hypothetical protein 419988..421010 Lactobacillus plantarum JDM1 8188633 YP_003061985.1 CDS JDM1_0399 NC_012984.1 421093 422079 D lipoprotein precursor () 421093..422079 Lactobacillus plantarum JDM1 8188634 YP_003061986.1 CDS JDM1_0400 NC_012984.1 422249 423058 R HAD superfamily hydrolase complement(422249..423058) Lactobacillus plantarum JDM1 8188635 YP_003061987.1 CDS JDM1_0401 NC_012984.1 423078 424430 R hydrolase () complement(423078..424430) Lactobacillus plantarum JDM1 8188636 YP_003061988.1 CDS JDM1_0402 NC_012984.1 424445 425377 R hypothetical protein complement(424445..425377) Lactobacillus plantarum JDM1 8188637 YP_003061989.1 CDS JDM1_0403 NC_012984.1 425686 426180 D hypothetical protein 425686..426180 Lactobacillus plantarum JDM1 8188638 YP_003061990.1 CDS rpoE NC_012984.1 426225 426833 D participates in both the initiation and recycling phases of transcription; in the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; DNA-directed RNA polymerase subunit delta 426225..426833 Lactobacillus plantarum JDM1 8188639 YP_003061991.1 CDS pyrG NC_012984.1 427006 428619 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 427006..428619 Lactobacillus plantarum JDM1 8189279 YP_003061992.1 CDS serS1 NC_012984.1 429086 430357 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 429086..430357 Lactobacillus plantarum JDM1 8189280 YP_003061993.1 CDS sdaC NC_012984.1 430709 431989 D serine transporter 430709..431989 Lactobacillus plantarum JDM1 8189281 YP_003061994.1 CDS sdhB NC_012984.1 432359 433012 D L-serine dehydratase, beta subunit 432359..433012 Lactobacillus plantarum JDM1 8189282 YP_003061995.1 CDS sdhA NC_012984.1 433031 433930 D L-serine dehydratase, alpha subunit 433031..433930 Lactobacillus plantarum JDM1 8189283 YP_003061996.1 CDS JDM1_0410 NC_012984.1 434081 434809 D hypothetical protein 434081..434809 Lactobacillus plantarum JDM1 8189284 YP_003061997.1 CDS JDM1_0411 NC_012984.1 435391 435585 D hypothetical protein 435391..435585 Lactobacillus plantarum JDM1 8189285 YP_003061998.1 CDS murA1 NC_012984.1 436126 437406 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 436126..437406 Lactobacillus plantarum JDM1 8189286 YP_003061999.1 CDS rho NC_012984.1 437436 438728 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 437436..438728 Lactobacillus plantarum JDM1 8189287 YP_003062000.1 CDS rpmE NC_012984.1 438855 439100 D ribosomal protein L31 438855..439100 Lactobacillus plantarum JDM1 8189288 YP_003062001.1 CDS JDM1_0415 NC_012984.1 439233 440369 R hypothetical protein complement(439233..440369) Lactobacillus plantarum JDM1 8189289 YP_003062002.1 CDS srtA NC_012984.1 440568 441263 D sortase 440568..441263 Lactobacillus plantarum JDM1 8189290 YP_003062003.1 CDS JDM1_0417 NC_012984.1 441372 441932 D hypothetical protein 441372..441932 Lactobacillus plantarum JDM1 8189291 YP_003062004.1 CDS htpX NC_012984.1 441944 442843 D metalloprotease; heat shock protein HtpX 441944..442843 Lactobacillus plantarum JDM1 8189292 YP_003062005.1 CDS JDM1_0419 NC_012984.1 442904 443692 D hypothetical protein 442904..443692 Lactobacillus plantarum JDM1 8189293 YP_003062006.1 CDS murF NC_012984.1 443914 445302 D UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diamino pimelate--D-alanyl-D-alanine ligase 443914..445302 Lactobacillus plantarum JDM1 8189294 YP_003062007.1 CDS rhe1 NC_012984.1 445557 447143 D ATP-dependent RNA helicase 445557..447143 Lactobacillus plantarum JDM1 8189295 YP_003062008.1 CDS acpS NC_012984.1 448119 448481 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 448119..448481 Lactobacillus plantarum JDM1 8189296 YP_003062009.1 CDS alr NC_012984.1 448481 449608 D alanine racemase 448481..449608 Lactobacillus plantarum JDM1 8189297 YP_003062010.1 CDS JDM1_0424 NC_012984.1 450009 450401 D hypothetical protein 450009..450401 Lactobacillus plantarum JDM1 8189298 YP_003062011.1 CDS kup1 NC_012984.1 450694 452676 D potassium uptake protein 450694..452676 Lactobacillus plantarum JDM1 8189299 YP_003062012.1 CDS carB NC_012984.1 452783 455845 R carbamoyl phosphate synthase large subunit complement(452783..455845) Lactobacillus plantarum JDM1 8189300 YP_003062013.1 CDS carA NC_012984.1 455838 456905 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(455838..456905) Lactobacillus plantarum JDM1 8189301 YP_003062014.1 CDS argC NC_012984.1 457173 458198 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 457173..458198 Lactobacillus plantarum JDM1 8189302 YP_003062015.1 CDS argJ NC_012984.1 458223 459437 D bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 458223..459437 Lactobacillus plantarum JDM1 8189303 YP_003062016.1 CDS argB NC_012984.1 459453 460199 D catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 459453..460199 Lactobacillus plantarum JDM1 8189304 YP_003062017.1 CDS argD NC_012984.1 460196 461365 D acetylornithine aminotransferase 460196..461365 Lactobacillus plantarum JDM1 8189305 YP_003062018.1 CDS argF NC_012984.1 461358 462380 D catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; ornithine carbamoyltransferase 461358..462380 Lactobacillus plantarum JDM1 8189306 YP_003062019.1 CDS JDM1_0433 NC_012984.1 462489 462995 D hypothetical protein 462489..462995 Lactobacillus plantarum JDM1 8189307 YP_003062020.1 CDS JDM1_0434 NC_012984.1 463273 463911 R hypothetical protein complement(463273..463911) Lactobacillus plantarum JDM1 8189308 YP_003062021.1 CDS JDM1_0435 NC_012984.1 464066 465460 R hypothetical protein complement(464066..465460) Lactobacillus plantarum JDM1 8189309 YP_003062022.1 CDS ldhL1 NC_012984.1 465679 466641 R L-lactate dehydrogenase complement(465679..466641) Lactobacillus plantarum JDM1 8189310 YP_003062023.1 CDS pth NC_012984.1 466973 467530 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 466973..467530 Lactobacillus plantarum JDM1 8189311 YP_003062024.1 CDS mfd NC_012984.1 467550 471077 D transcription-repair coupling factor 467550..471077 Lactobacillus plantarum JDM1 8189312 YP_003062025.1 CDS JDM1_0439 NC_012984.1 471252 472856 D hypothetical protein 471252..472856 Lactobacillus plantarum JDM1 8189313 YP_003062026.1 CDS JDM1_0440 NC_012984.1 472853 473140 D hypothetical protein 472853..473140 Lactobacillus plantarum JDM1 8189314 YP_003062027.1 CDS JDM1_0441 NC_012984.1 473261 473659 D hypothetical protein 473261..473659 Lactobacillus plantarum JDM1 8189315 YP_003062028.1 CDS JDM1_0442 NC_012984.1 473784 474323 D hypothetical protein 473784..474323 Lactobacillus plantarum JDM1 8189316 YP_003062029.1 CDS mesJ NC_012984.1 474607 475953 D cell cycle protein MesJ 474607..475953 Lactobacillus plantarum JDM1 8189317 YP_003062030.1 CDS hprT NC_012984.1 475973 476515 D hypoxanthine-guanine phosphoribosyltransferase 475973..476515 Lactobacillus plantarum JDM1 8189318 YP_003062031.1 CDS ftsH NC_012984.1 476595 478832 D cell division protein FtsH, ATP-dependent zinc metallopeptidase 476595..478832 Lactobacillus plantarum JDM1 8189319 YP_003062032.1 CDS hslO NC_012984.1 478981 479868 D becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; heat shock protein 33 478981..479868 Lactobacillus plantarum JDM1 8189320 YP_003062033.1 CDS JDM1_0447 NC_012984.1 479868 480875 D transcription regulator 479868..480875 Lactobacillus plantarum JDM1 8189321 YP_003062034.1 CDS lysS NC_012984.1 480979 482478 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 480979..482478 Lactobacillus plantarum JDM1 8189322 YP_003062035.1 CDS isp2 NC_012984.1 482642 484312 D transposase 482642..484312 Lactobacillus plantarum JDM1 8189323 YP_003062036.1 CDS dtpT NC_012984.1 490560 492032 D di-/tripeptide transport protein 490560..492032 Lactobacillus plantarum JDM1 8189329 YP_003062037.1 CDS JDM1_0451 NC_012984.1 492087 492929 D hypothetical protein 492087..492929 Lactobacillus plantarum JDM1 8189330 YP_003062038.1 CDS JDM1_0452 NC_012984.1 493491 493949 D hypothetical protein 493491..493949 Lactobacillus plantarum JDM1 8189333 YP_003062039.1 CDS JDM1_0453 NC_012984.1 494129 494653 D hypothetical protein 494129..494653 Lactobacillus plantarum JDM1 8189334 YP_003062040.1 CDS JDM1_0454 NC_012984.1 494684 495019 D hypothetical protein 494684..495019 Lactobacillus plantarum JDM1 8189335 YP_003062041.1 CDS JDM1_0455 NC_012984.1 495054 495896 D hypothetical protein 495054..495896 Lactobacillus plantarum JDM1 8189336 YP_003062042.1 CDS JDM1_0456 NC_012984.1 496055 497161 R cation transport protein complement(496055..497161) Lactobacillus plantarum JDM1 8189337 YP_003062043.1 CDS JDM1_0457 NC_012984.1 497354 498175 R transport protein complement(497354..498175) Lactobacillus plantarum JDM1 8189338 YP_003062044.1 CDS proC NC_012984.1 498536 499327 D pyrroline-5-carboxylate reductase 498536..499327 Lactobacillus plantarum JDM1 8189339 YP_003062045.1 CDS nagA NC_012984.1 499406 500542 D N-acetylglucosamine-6-phosphate deacetylase 499406..500542 Lactobacillus plantarum JDM1 8189340 YP_003062046.1 CDS JDM1_0460 NC_012984.1 500557 501267 D transcription regulator 500557..501267 Lactobacillus plantarum JDM1 8189341 YP_003062047.1 CDS tagA NC_012984.1 501437 502174 R teichoic acid biosynthesis protein A complement(501437..502174) Lactobacillus plantarum JDM1 8189342 YP_003062048.1 CDS nadC1 NC_012984.1 502331 503809 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 502331..503809 Lactobacillus plantarum JDM1 8189343 YP_003062049.1 CDS nadE NC_012984.1 503809 504636 D catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 503809..504636 Lactobacillus plantarum JDM1 8189344 YP_003062050.1 CDS pacL2 NC_012984.1 505092 507746 D cation transporting P-type ATPase 505092..507746 Lactobacillus plantarum JDM1 8189345 YP_003062051.1 CDS JDM1_0465 NC_012984.1 507801 508235 D hypothetical protein 507801..508235 Lactobacillus plantarum JDM1 8189346 YP_003062052.1 CDS tex NC_012984.1 508529 510700 D transcription accessory protein 508529..510700 Lactobacillus plantarum JDM1 8189347 YP_003062053.1 CDS JDM1_0467 NC_012984.1 510700 511146 D hypothetical protein 510700..511146 Lactobacillus plantarum JDM1 8189348 YP_003062054.1 CDS hom2 NC_012984.1 511212 512498 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 511212..512498 Lactobacillus plantarum JDM1 8189349 YP_003062055.1 CDS thrB NC_012984.1 512507 513382 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 512507..513382 Lactobacillus plantarum JDM1 8189350 YP_003062056.1 CDS JDM1_0470 NC_012984.1 513673 514830 R prophage Lp4 protein 1, integrase complement(513673..514830) Lactobacillus plantarum JDM1 8189352 YP_003062057.1 CDS JDM1_0471 NC_012984.1 515000 515668 R hypothetical protein complement(515000..515668) Lactobacillus plantarum JDM1 8189353 YP_003062058.1 CDS JDM1_0472 NC_012984.1 515781 516212 R nucleotide-binding protein, UspA family complement(515781..516212) Lactobacillus plantarum JDM1 8189354 YP_003062059.1 CDS JDM1_0473 NC_012984.1 517037 517705 R hypothetical protein complement(517037..517705) Lactobacillus plantarum JDM1 8189355 YP_003062060.1 CDS JDM1_0474 NC_012984.1 517797 518228 R prophage Lp2 protein 8 complement(517797..518228) Lactobacillus plantarum JDM1 8189356 YP_003062061.1 CDS JDM1_0475 NC_012984.1 518238 518615 R prophage Lp1 protein 8 complement(518238..518615) Lactobacillus plantarum JDM1 8189357 YP_003062062.1 CDS JDM1_0476 NC_012984.1 518928 519137 D hypothetical protein 518928..519137 Lactobacillus plantarum JDM1 8189358 YP_003062063.1 CDS JDM1_0477 NC_012984.1 519141 519356 D hypothetical protein 519141..519356 Lactobacillus plantarum JDM1 8187985 YP_003062064.1 CDS JDM1_0478 NC_012984.1 519607 519879 D hypothetical protein 519607..519879 Lactobacillus plantarum JDM1 8187986 YP_003062065.1 CDS JDM1_0479 NC_012984.1 520018 520467 D Gp40 protein 520018..520467 Lactobacillus plantarum JDM1 8187987 YP_003062066.1 CDS JDM1_0480 NC_012984.1 520623 520808 D hypothetical protein 520623..520808 Lactobacillus plantarum JDM1 8187988 YP_003062067.1 CDS JDM1_0481 NC_012984.1 520885 520950 D hypothetical protein 520885..520950 Lactobacillus plantarum JDM1 8187989 YP_003062068.1 CDS JDM1_0482 NC_012984.1 521271 521522 D hypothetical protein 521271..521522 Lactobacillus plantarum JDM1 8187990 YP_003062069.1 CDS JDM1_0483 NC_012984.1 521519 521998 D hypothetical protein 521519..521998 Lactobacillus plantarum JDM1 8187991 YP_003062070.1 CDS JDM1_0484 NC_012984.1 522150 523409 D Helicase-like protein:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase-like protein 522150..523409 Lactobacillus plantarum JDM1 8187992 YP_003062071.1 CDS JDM1_0485 NC_012984.1 523406 524122 D phage NTP-binding protein 523406..524122 Lactobacillus plantarum JDM1 8187993 YP_003062072.1 CDS JDM1_0486 NC_012984.1 524125 524724 D hypothetical protein 524125..524724 Lactobacillus plantarum JDM1 8187994 YP_003062073.1 CDS JDM1_0487 NC_012984.1 524738 525292 D hypothetical protein 524738..525292 Lactobacillus plantarum JDM1 8187995 YP_003062074.1 CDS JDM1_0488 NC_012984.1 525366 526160 D prophage Lp3 protein 7 525366..526160 Lactobacillus plantarum JDM1 8187996 YP_003062075.1 CDS JDM1_0489 NC_012984.1 526157 527431 D prophage Lp3 protein 8, helicase 526157..527431 Lactobacillus plantarum JDM1 8187997 YP_003062076.1 CDS JDM1_0490 NC_012984.1 527689 528021 D phage protein 527689..528021 Lactobacillus plantarum JDM1 8187998 YP_003062077.1 CDS JDM1_0491 NC_012984.1 528041 528265 D hypothetical protein 528041..528265 Lactobacillus plantarum JDM1 8187999 YP_003062078.1 CDS JDM1_0492 NC_012984.1 528291 528677 D prophage Lp2 protein 26 528291..528677 Lactobacillus plantarum JDM1 8188000 YP_003062079.1 CDS JDM1_0493 NC_012984.1 528674 529135 D prophage Lp1 protein 31 528674..529135 Lactobacillus plantarum JDM1 8188001 YP_003062080.1 CDS JDM1_0494 NC_012984.1 529262 529573 D hypothetical protein 529262..529573 Lactobacillus plantarum JDM1 8188002 YP_003062081.1 CDS JDM1_0495 NC_012984.1 529585 530016 D hypothetical protein 529585..530016 Lactobacillus plantarum JDM1 8188003 YP_003062082.1 CDS JDM1_0496 NC_012984.1 530195 530902 D hypothetical protein 530195..530902 Lactobacillus plantarum JDM1 8188004 YP_003062083.1 CDS JDM1_0497 NC_012984.1 530971 531186 D hypothetical protein 530971..531186 Lactobacillus plantarum JDM1 8188005 YP_003062084.1 CDS JDM1_0498 NC_012984.1 531649 531762 D hypothetical protein 531649..531762 Lactobacillus plantarum JDM1 8188006 YP_003062085.1 CDS JDM1_0499 NC_012984.1 531796 532047 D hypothetical protein 531796..532047 Lactobacillus plantarum JDM1 8188007 YP_003062086.1 CDS JDM1_0500 NC_012984.1 532158 532445 D gp1 protein 532158..532445 Lactobacillus plantarum JDM1 8188008 YP_003062087.1 CDS JDM1_0501 NC_012984.1 532442 534124 D Terminase 532442..534124 Lactobacillus plantarum JDM1 8188009 YP_003062088.1 CDS JDM1_0502 NC_012984.1 534143 535285 D phage portal protein, HK97 family 534143..535285 Lactobacillus plantarum JDM1 8188010 YP_003062089.1 CDS JDM1_0503 NC_012984.1 535272 536015 D Clp protease domain protein 535272..536015 Lactobacillus plantarum JDM1 8188011 YP_003062090.1 CDS cps NC_012984.1 536036 537214 D major head protein Cps 536036..537214 Lactobacillus plantarum JDM1 8188012 YP_003062091.1 CDS JDM1_0505 NC_012984.1 537354 537659 D hypothetical protein 537354..537659 Lactobacillus plantarum JDM1 8188013 YP_003062092.1 CDS JDM1_0506 NC_012984.1 537640 538029 D gp8 protein 537640..538029 Lactobacillus plantarum JDM1 8188014 YP_003062093.1 CDS JDM1_0507 NC_012984.1 538026 538433 D gp9 protein 538026..538433 Lactobacillus plantarum JDM1 8188015 YP_003062094.1 CDS JDM1_0508 NC_012984.1 538430 538852 D gp10 protein 538430..538852 Lactobacillus plantarum JDM1 8188016 YP_003062095.1 CDS JDM1_0509 NC_012984.1 538867 539478 D major tail protein 538867..539478 Lactobacillus plantarum JDM1 8188017 YP_003062096.1 CDS JDM1_0510 NC_012984.1 539571 539885 D hypothetical protein 539571..539885 Lactobacillus plantarum JDM1 8188018 YP_003062097.1 CDS JDM1_0511 NC_012984.1 540072 543977 D tape measure protein 540072..543977 Lactobacillus plantarum JDM1 8188019 YP_003062098.1 CDS JDM1_0512 NC_012984.1 544082 544615 D phage protein 544082..544615 Lactobacillus plantarum JDM1 8188020 YP_003062099.1 CDS JDM1_0513 NC_012984.1 544619 545440 D hypothetical protein 544619..545440 Lactobacillus plantarum JDM1 8188021 YP_003062100.1 CDS JDM1_0514 NC_012984.1 545460 549428 D reticulocyte binding protein 545460..549428 Lactobacillus plantarum JDM1 8188022 YP_003062101.1 CDS JDM1_0515 NC_012984.1 549455 549937 D hypothetical protein 549455..549937 Lactobacillus plantarum JDM1 8188023 YP_003062102.1 CDS JDM1_0516 NC_012984.1 549939 550373 D hypothetical protein 549939..550373 Lactobacillus plantarum JDM1 8188024 YP_003062103.1 CDS JDM1_0517 NC_012984.1 550403 550780 D hypothetical protein 550403..550780 Lactobacillus plantarum JDM1 8188025 YP_003062104.1 CDS JDM1_0518 NC_012984.1 550780 551052 D hypothetical protein 550780..551052 Lactobacillus plantarum JDM1 8188026 YP_003062105.1 CDS JDM1_0519 NC_012984.1 551052 551336 D hypothetical protein 551052..551336 Lactobacillus plantarum JDM1 8188027 YP_003062106.1 CDS JDM1_0520 NC_012984.1 551336 551722 D phage lysin 551336..551722 Lactobacillus plantarum JDM1 8188028 YP_003062107.1 CDS JDM1_0521 NC_012984.1 551805 552269 D phage lysin 551805..552269 Lactobacillus plantarum JDM1 8188029 YP_003062108.1 CDS JDM1_0522 NC_012984.1 552695 553549 D hypothetical protein 552695..553549 Lactobacillus plantarum JDM1 8188030 YP_003062109.1 CDS pts9AB NC_012984.1 553840 554814 D mannose PTS, EIIAB 553840..554814 Lactobacillus plantarum JDM1 8188031 YP_003062110.1 CDS pts9C NC_012984.1 554850 555656 D mannose PTS, EIIC 554850..555656 Lactobacillus plantarum JDM1 8188032 YP_003062111.1 CDS pts9D NC_012984.1 555675 556607 D mannose PTS, EIID 555675..556607 Lactobacillus plantarum JDM1 8188033 YP_003062112.1 CDS JDM1_0526 NC_012984.1 556736 557122 D hypothetical protein 556736..557122 Lactobacillus plantarum JDM1 8188034 YP_003062113.1 CDS JDM1_0527 NC_012984.1 557427 560276 D transcription regulator 557427..560276 Lactobacillus plantarum JDM1 8188035 YP_003062114.1 CDS pts10A NC_012984.1 560347 560766 D mannose PTS, EIIA 560347..560766 Lactobacillus plantarum JDM1 8188036 YP_003062115.1 CDS pts10B NC_012984.1 560763 561281 D mannose PTS, EIIB 560763..561281 Lactobacillus plantarum JDM1 8188037 YP_003062116.1 CDS fabH1 NC_012984.1 561445 562416 D FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; in Pseudomonas this protein is involved in quinolone signal biosynthesis; 3-oxoacyl-ACP synthase 561445..562416 Lactobacillus plantarum JDM1 8188038 YP_003062117.1 CDS accB1 NC_012984.1 562427 562828 D acetyl-CoA carboxylase, biotin carboxyl carrier protein 562427..562828 Lactobacillus plantarum JDM1 8188039 YP_003062118.1 CDS accC1 NC_012984.1 562831 564153 D acetyl-CoA carboxylase, biotin carboxylase subunit 562831..564153 Lactobacillus plantarum JDM1 8188040 YP_003062119.1 CDS accD1 NC_012984.1 564150 564953 D acetyl-CoA carboxylase, carboxyl transferase subunit beta 564150..564953 Lactobacillus plantarum JDM1 8188041 YP_003062120.1 CDS accA1 NC_012984.1 564946 565719 D acetyl-CoA carboxylase, carboxyl transferase subunit alpha 564946..565719 Lactobacillus plantarum JDM1 8188042 YP_003062121.1 CDS JDM1_0535 NC_012984.1 565786 566979 R transcription regulator complement(565786..566979) Lactobacillus plantarum JDM1 8188043 YP_003062122.1 CDS mleP1 NC_012984.1 567289 568251 D malate transport protein 567289..568251 Lactobacillus plantarum JDM1 8188044 YP_003062123.1 CDS JDM1_0537 NC_012984.1 568684 569709 D transport protein 568684..569709 Lactobacillus plantarum JDM1 8188045 YP_003062124.1 CDS pgm2 NC_012984.1 569859 570536 D phosphoglycerate mutase 569859..570536 Lactobacillus plantarum JDM1 8188046 YP_003062125.1 CDS zmp2 NC_012984.1 570956 571648 D extracellular zinc metalloproteinase () 570956..571648 Lactobacillus plantarum JDM1 8188047 YP_003062126.1 CDS pepC1 NC_012984.1 571838 573169 R cysteine aminopeptidase complement(571838..573169) Lactobacillus plantarum JDM1 8188048 YP_003062127.1 CDS rpiA1 NC_012984.1 573245 573928 R Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A complement(573245..573928) Lactobacillus plantarum JDM1 8188049 YP_003062128.1 CDS JDM1_0542 NC_012984.1 573937 574233 R acetyltransferase () complement(573937..574233) Lactobacillus plantarum JDM1 8188050 YP_003062129.1 CDS dut NC_012984.1 574372 574908 D trimetaphosphatase 574372..574908 Lactobacillus plantarum JDM1 8188051 YP_003062130.1 CDS radA NC_012984.1 576034 577413 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 576034..577413 Lactobacillus plantarum JDM1 8188052 YP_003062131.1 CDS JDM1_0545 NC_012984.1 577593 578603 D twitching motility protein PilT 577593..578603 Lactobacillus plantarum JDM1 8188053 YP_003062132.1 CDS gltX NC_012984.1 578927 580417 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 578927..580417 Lactobacillus plantarum JDM1 8188054 YP_003062133.1 CDS cysS NC_012984.1 580695 582107 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 580695..582107 Lactobacillus plantarum JDM1 8188055 YP_003062134.1 CDS JDM1_0548 NC_012984.1 582109 582519 D hypothetical protein 582109..582519 Lactobacillus plantarum JDM1 8188056 YP_003062135.1 CDS trmH NC_012984.1 582509 583276 D tRNA/rRNA methyltransferase 582509..583276 Lactobacillus plantarum JDM1 8188057 YP_003062136.1 CDS JDM1_0550 NC_012984.1 583278 583823 D hypothetical protein 583278..583823 Lactobacillus plantarum JDM1 8188058 YP_003062137.1 CDS sigH NC_012984.1 584330 584932 D DNA-directed RNA polymerase, sigma factor 30 584330..584932 Lactobacillus plantarum JDM1 8188059 YP_003062138.1 CDS rpmG NC_012984.1 584994 585143 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 584994..585143 Lactobacillus plantarum JDM1 8188060 YP_003062139.1 CDS secE NC_012984.1 585155 585340 D forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 585155..585340 Lactobacillus plantarum JDM1 8188061 YP_003062140.1 CDS nusG NC_012984.1 585445 585993 D transcription antitermination protein NusG 585445..585993 Lactobacillus plantarum JDM1 8188062 YP_003062141.1 CDS JDM1_0555 NC_012984.1 586021 586908 D cell surface hydrolase, membrane-bound () 586021..586908 Lactobacillus plantarum JDM1 8188063 YP_003062142.1 CDS rplK NC_012984.1 587010 587435 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 587010..587435 Lactobacillus plantarum JDM1 8188064 YP_003062143.1 CDS rplA NC_012984.1 587536 588225 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 587536..588225 Lactobacillus plantarum JDM1 8188065 YP_003062144.1 CDS rplJ NC_012984.1 588424 588927 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 588424..588927 Lactobacillus plantarum JDM1 8189902 YP_003062145.1 CDS rplL NC_012984.1 588989 589357 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 588989..589357 Lactobacillus plantarum JDM1 8188395 YP_003062146.1 CDS JDM1_0560 NC_012984.1 589721 590698 R prophage Lp1 protein 65 complement(589721..590698) Lactobacillus plantarum JDM1 8188396 YP_003062147.1 CDS JDM1_0561 NC_012984.1 590711 591379 R prophage Lp1 protein 66, lipoprotein precursor complement(590711..591379) Lactobacillus plantarum JDM1 8188397 YP_003062148.1 CDS JDM1_0562 NC_012984.1 591728 594286 D hypothetical protein 591728..594286 Lactobacillus plantarum JDM1 8188398 YP_003062149.1 CDS JDM1_0563 NC_012984.1 594573 595238 D XRE family transcriptional regulator 594573..595238 Lactobacillus plantarum JDM1 8188399 YP_003062150.1 CDS JDM1_0564 NC_012984.1 595536 596111 R hypothetical protein complement(595536..596111) Lactobacillus plantarum JDM1 8188400 YP_003062151.1 CDS nrdF NC_012984.1 596193 597203 R B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta complement(596193..597203) Lactobacillus plantarum JDM1 8188401 YP_003062152.1 CDS nrdE NC_012984.1 597231 599396 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(597231..599396) Lactobacillus plantarum JDM1 8188402 YP_003062153.1 CDS nrdH NC_012984.1 599535 599765 R glutaredoxin-like protein NrdH complement(599535..599765) Lactobacillus plantarum JDM1 8188403 YP_003062154.1 CDS rsmc NC_012984.1 599988 600596 D 16S RNA methylase 599988..600596 Lactobacillus plantarum JDM1 8188404 YP_003062155.1 CDS JDM1_0569 NC_012984.1 600599 601105 D cytosine/adenosine deaminase 600599..601105 Lactobacillus plantarum JDM1 8188405 YP_003062156.1 CDS dnaX NC_012984.1 601631 603328 D DNA-directed DNA polymerase III, gamma/tau subunit 601631..603328 Lactobacillus plantarum JDM1 8188406 YP_003062157.1 CDS JDM1_0571 NC_012984.1 603350 603658 D hypothetical protein 603350..603658 Lactobacillus plantarum JDM1 8188407 YP_003062158.1 CDS recR NC_012984.1 603674 604273 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 603674..604273 Lactobacillus plantarum JDM1 8188408 YP_003062159.1 CDS JDM1_0573 NC_012984.1 604288 604539 D hypothetical protein 604288..604539 Lactobacillus plantarum JDM1 8188409 YP_003062160.1 CDS JDM1_0574 NC_012984.1 604892 606940 R hypothetical protein complement(604892..606940) Lactobacillus plantarum JDM1 8188410 YP_003062161.1 CDS JDM1_0575 NC_012984.1 607072 607509 D hypothetical protein 607072..607509 Lactobacillus plantarum JDM1 8188411 YP_003062162.1 CDS JDM1_0576 NC_012984.1 607561 607791 D hypothetical protein 607561..607791 Lactobacillus plantarum JDM1 8188412 YP_003062163.1 CDS ulaA NC_012984.1 607802 609064 D membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC 607802..609064 Lactobacillus plantarum JDM1 8188413 YP_003062164.1 CDS JDM1_0578 NC_012984.1 609079 609717 D 2-keto-3-deoxy-6-phosphogluconate aldolase 609079..609717 Lactobacillus plantarum JDM1 8188414 YP_003062165.1 CDS tmk NC_012984.1 610221 610886 D catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 610221..610886 Lactobacillus plantarum JDM1 8188415 YP_003062166.1 CDS JDM1_0580 NC_012984.1 610883 611212 D hypothetical protein 610883..611212 Lactobacillus plantarum JDM1 8188416 YP_003062167.1 CDS holB NC_012984.1 611229 612248 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 611229..612248 Lactobacillus plantarum JDM1 8188417 YP_003062168.1 CDS JDM1_0582 NC_012984.1 612273 612620 D hypothetical protein 612273..612620 Lactobacillus plantarum JDM1 8188418 YP_003062169.1 CDS JDM1_0583 NC_012984.1 612719 613615 D methyltransferase () 612719..613615 Lactobacillus plantarum JDM1 8188419 YP_003062170.1 CDS fat NC_012984.1 613619 614404 D oleoyl-ACP thioesterase 613619..614404 Lactobacillus plantarum JDM1 8188420 YP_003062171.1 CDS galE1 NC_012984.1 614543 615538 D UDP-glucose 4-epimerase 614543..615538 Lactobacillus plantarum JDM1 8188421 YP_003062172.1 CDS phnW NC_012984.1 615672 616772 R (2-aminoethyl)phosphonate--pyruvate aminotransferase complement(615672..616772) Lactobacillus plantarum JDM1 8188422 YP_003062173.1 CDS phnX NC_012984.1 616794 617591 R catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate; phosphonoacetaldehyde hydrolase complement(616794..617591) Lactobacillus plantarum JDM1 8188423 YP_003062174.1 CDS phnE1 NC_012984.1 617616 618470 R phosphonate ABC transporter permease complement(617616..618470) Lactobacillus plantarum JDM1 8188424 YP_003062175.1 CDS phnE2 NC_012984.1 618467 619255 R phosphonate ABC transporter permease complement(618467..619255) Lactobacillus plantarum JDM1 8188425 YP_003062176.1 CDS phnC NC_012984.1 619260 620030 R phosphonate ABC transporter ATP-binding protein complement(619260..620030) Lactobacillus plantarum JDM1 8188426 YP_003062177.1 CDS phnD NC_012984.1 620068 621120 R phosphonate ABC transporter substrate-binding protein complement(620068..621120) Lactobacillus plantarum JDM1 8188427 YP_003062178.1 CDS gpp NC_012984.1 621400 622125 D glycoprotein endopeptidase 621400..622125 Lactobacillus plantarum JDM1 8188428 YP_003062179.1 CDS rimI1 NC_012984.1 622205 622687 D ribosomal-protein-alanine N-acetyltransferase 622205..622687 Lactobacillus plantarum JDM1 8188429 YP_003062180.1 CDS rimI2 NC_012984.1 622680 623135 D ribosomal-protein-alanine N-acetyltransferase 622680..623135 Lactobacillus plantarum JDM1 8188430 YP_003062181.1 CDS gcp NC_012984.1 623140 624186 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 623140..624186 Lactobacillus plantarum JDM1 8188431 YP_003062182.1 CDS JDM1_0596 NC_012984.1 625105 627087 R ABC transporter ATP-binding protein complement(625105..627087) Lactobacillus plantarum JDM1 8188432 YP_003062183.1 CDS JDM1_0597 NC_012984.1 627256 627933 D modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex 627256..627933 Lactobacillus plantarum JDM1 8188433 YP_003062184.1 CDS isp2 NC_012984.1 628122 629774 D transposase 628122..629774 Lactobacillus plantarum JDM1 8188434 YP_003062185.1 CDS JDM1_0599 NC_012984.1 629867 630514 R CAAX family protease complement(629867..630514) Lactobacillus plantarum JDM1 8188435 YP_003062186.1 CDS groES NC_012984.1 630704 630988 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 630704..630988 Lactobacillus plantarum JDM1 8188436 YP_003062187.1 CDS groEL NC_012984.1 631044 632669 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 631044..632669 Lactobacillus plantarum JDM1 8188437 YP_003062188.1 CDS JDM1_0602 NC_012984.1 632919 634754 D transport protein 632919..634754 Lactobacillus plantarum JDM1 8188438 YP_003062189.1 CDS tagO NC_012984.1 634970 636067 D UDP-phosphate N-acetylglucosaminyltransferase 634970..636067 Lactobacillus plantarum JDM1 8188439 YP_003062190.1 CDS pstF NC_012984.1 636392 637294 D phosphate ABC transporter substrate-binding protein 636392..637294 Lactobacillus plantarum JDM1 8188440 YP_003062191.1 CDS JDM1_0605 NC_012984.1 637485 638132 R hypothetical protein complement(637485..638132) Lactobacillus plantarum JDM1 8188441 YP_003062192.1 CDS comFA NC_012984.1 638199 639551 D ATP-dependent DNA helicase/translocase () 638199..639551 Lactobacillus plantarum JDM1 8188442 YP_003062193.1 CDS JDM1_0607 NC_012984.1 639511 640185 D late competence protein 639511..640185 Lactobacillus plantarum JDM1 8188443 YP_003062194.1 CDS JDM1_0608 NC_012984.1 640319 640885 D ribosomal protein S30EA 640319..640885 Lactobacillus plantarum JDM1 8188444 YP_003062195.1 CDS secA NC_012984.1 641272 643635 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 641272..643635 Lactobacillus plantarum JDM1 8188445 YP_003062196.1 CDS prfB NC_012984.1 643784 644857 D recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 643784..644857 Lactobacillus plantarum JDM1 8188447 YP_003062197.1 CDS JDM1_0612 NC_012984.1 645041 646216 D hypothetical protein 645041..646216 Lactobacillus plantarum JDM1 8188448 YP_003062198.1 CDS rrp3 NC_012984.1 646216 646944 D response regulator 646216..646944 Lactobacillus plantarum JDM1 8188449 YP_003062199.1 CDS hpk3 NC_012984.1 646937 648340 D histidine protein kinase; sensor protein 646937..648340 Lactobacillus plantarum JDM1 8188450 YP_003062200.1 CDS pstE NC_012984.1 648685 649560 D phosphate ABC transporter substrate-binding protein 648685..649560 Lactobacillus plantarum JDM1 8188451 YP_003062201.1 CDS pstD NC_012984.1 649571 650500 D phosphate ABC transporter permease 649571..650500 Lactobacillus plantarum JDM1 8188452 YP_003062202.1 CDS pstC NC_012984.1 650490 651374 D phosphate ABC transporter permease 650490..651374 Lactobacillus plantarum JDM1 8188453 YP_003062203.1 CDS pstB NC_012984.1 651389 652198 D ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 651389..652198 Lactobacillus plantarum JDM1 8188454 YP_003062204.1 CDS pstA NC_012984.1 652210 652965 D ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 652210..652965 Lactobacillus plantarum JDM1 8188455 YP_003062205.1 CDS phoU NC_012984.1 652978 653652 D phosphate transport system protein 652978..653652 Lactobacillus plantarum JDM1 8188456 YP_003062206.1 CDS JDM1_0621 NC_012984.1 653752 654063 D stress-responsive transcription regulator () 653752..654063 Lactobacillus plantarum JDM1 8188457 YP_003062207.1 CDS JDM1_0622 NC_012984.1 654085 654450 D hypothetical protein 654085..654450 Lactobacillus plantarum JDM1 8188458 YP_003062208.1 CDS hprK NC_012984.1 654596 655543 D catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 654596..655543 Lactobacillus plantarum JDM1 8188459 YP_003062209.1 CDS lgt NC_012984.1 655562 656410 D transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 655562..656410 Lactobacillus plantarum JDM1 8188460 YP_003062210.1 CDS gpsA NC_012984.1 656428 657444 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 656428..657444 Lactobacillus plantarum JDM1 8188461 YP_003062211.1 CDS galU NC_012984.1 657488 658408 D UTP-glucose-1-phosphate uridylyltransferase 657488..658408 Lactobacillus plantarum JDM1 8188462 YP_003062212.1 CDS JDM1_0627 NC_012984.1 658506 659186 R diguanylate cyclase/phosphodiesterase domain-containing protein complement(658506..659186) Lactobacillus plantarum JDM1 8188463 YP_003062213.1 CDS JDM1_0628 NC_012984.1 659578 660342 D NADH oxidase 659578..660342 Lactobacillus plantarum JDM1 8188464 YP_003062214.1 CDS JDM1_0629 NC_012984.1 660344 660991 D NADH oxidase 660344..660991 Lactobacillus plantarum JDM1 8188465 YP_003062215.1 CDS trxB1 NC_012984.1 661184 662122 D thioredoxin reductase 661184..662122 Lactobacillus plantarum JDM1 8188466 YP_003062216.1 CDS JDM1_0631 NC_012984.1 662228 662860 R hypothetical protein complement(662228..662860) Lactobacillus plantarum JDM1 8188467 YP_003062217.1 CDS JDM1_0632 NC_012984.1 662861 663418 R hypothetical protein complement(662861..663418) Lactobacillus plantarum JDM1 8188468 YP_003062218.1 CDS pgm NC_012984.1 663532 665259 D phosphoglucomutase 663532..665259 Lactobacillus plantarum JDM1 8188469 YP_003062219.1 CDS JDM1_0634 NC_012984.1 665383 666093 R diguanylate cyclase/phosphodiesterase domain-containing protein complement(665383..666093) Lactobacillus plantarum JDM1 8188470 YP_003062220.1 CDS nox2 NC_012984.1 666247 667605 D NADH oxidase 666247..667605 Lactobacillus plantarum JDM1 8188471 YP_003062221.1 CDS aad NC_012984.1 668051 668608 R D-alanyl-D-alanine dipeptidase complement(668051..668608) Lactobacillus plantarum JDM1 8188472 YP_003062222.1 CDS JDM1_0637 NC_012984.1 668778 669974 D multidrug transport protein 668778..669974 Lactobacillus plantarum JDM1 8188473 YP_003062223.1 CDS JDM1_0638 NC_012984.1 670080 670727 D HD superfamily hydrolase 670080..670727 Lactobacillus plantarum JDM1 8188474 YP_003062224.1 CDS uvrB NC_012984.1 670876 672879 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 670876..672879 Lactobacillus plantarum JDM1 8188475 YP_003062225.1 CDS uvrA NC_012984.1 672914 675769 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 672914..675769 Lactobacillus plantarum JDM1 8189523 YP_003062226.1 CDS luxS NC_012984.1 675830 676306 D catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 675830..676306 Lactobacillus plantarum JDM1 8188641 YP_003062227.1 CDS argG NC_012984.1 676643 677878 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 676643..677878 Lactobacillus plantarum JDM1 8188642 YP_003062228.1 CDS argH NC_012984.1 677878 679281 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 677878..679281 Lactobacillus plantarum JDM1 8188643 YP_003062229.1 CDS JDM1_0644 NC_012984.1 679483 680019 D hypothetical protein 679483..680019 Lactobacillus plantarum JDM1 8188644 YP_003062230.1 CDS JDM1_0645 NC_012984.1 680216 681100 D hypothetical protein 680216..681100 Lactobacillus plantarum JDM1 8188645 YP_003062231.1 CDS JDM1_0646 NC_012984.1 681097 682098 D hypothetical protein 681097..682098 Lactobacillus plantarum JDM1 8188646 YP_003062232.1 CDS JDM1_0647 NC_012984.1 682111 683043 D hypothetical protein 682111..683043 Lactobacillus plantarum JDM1 8188647 YP_003062233.1 CDS JDM1_0648 NC_012984.1 683468 685120 D lipoprotein precursor, peptide binding protein OppA-like protein 683468..685120 Lactobacillus plantarum JDM1 8188648 YP_003062234.1 CDS serA2 NC_012984.1 685332 686306 R phosphoglycerate dehydrogenase complement(685332..686306) Lactobacillus plantarum JDM1 8188649 YP_003062235.1 CDS clpP NC_012984.1 686465 687055 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(686465..687055) Lactobacillus plantarum JDM1 8188650 YP_003062236.1 CDS rpoN NC_012984.1 688029 689366 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 688029..689366 Lactobacillus plantarum JDM1 8188652 YP_003062237.1 CDS cggR NC_012984.1 689583 690614 D central glycolytic genes regulator 689583..690614 Lactobacillus plantarum JDM1 8188653 YP_003062238.1 CDS gapB NC_012984.1 690681 691703 D glyceraldehyde 3-phosphate dehydrogenase 690681..691703 Lactobacillus plantarum JDM1 8188654 YP_003062239.1 CDS pgk NC_012984.1 691824 693026 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 691824..693026 Lactobacillus plantarum JDM1 8188655 YP_003062240.1 CDS tpiA NC_012984.1 693053 693811 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 693053..693811 Lactobacillus plantarum JDM1 8188656 YP_003062241.1 CDS eno NC_012984.1 693893 695221 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 693893..695221 Lactobacillus plantarum JDM1 8188657 YP_003062242.1 CDS JDM1_0657 NC_012984.1 695513 696244 D hypothetical protein 695513..696244 Lactobacillus plantarum JDM1 8188658 YP_003062243.1 CDS eriC NC_012984.1 696261 697814 D chloride channel protein 696261..697814 Lactobacillus plantarum JDM1 8188659 YP_003062244.1 CDS secG NC_012984.1 697914 698150 D preprotein translocase subunit SecG 697914..698150 Lactobacillus plantarum JDM1 8188660 YP_003062245.1 CDS JDM1_0660 NC_012984.1 698199 698948 D carboxylesterase 698199..698948 Lactobacillus plantarum JDM1 8188661 YP_003062246.1 CDS JDM1_0661 NC_012984.1 698957 701371 D ribonuclease R 698957..701371 Lactobacillus plantarum JDM1 8188662 YP_003062247.1 CDS smpB NC_012984.1 701397 701867 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 701397..701867 Lactobacillus plantarum JDM1 8188663 YP_003062248.1 CDS JDM1_0663 NC_012984.1 702327 703952 D cell surface protein precursor 702327..703952 Lactobacillus plantarum JDM1 8188664 YP_003062249.1 CDS JDM1_0664 NC_012984.1 703949 710200 D cell surface protein precursor 703949..710200 Lactobacillus plantarum JDM1 8188665 YP_003062250.1 CDS isp2 NC_012984.1 710411 712066 D transposase 710411..712066 Lactobacillus plantarum JDM1 8188666 YP_003062251.1 CDS glnPH1 NC_012984.1 712364 713800 D glutamine ABC transporter, substrate binding and permease protein 712364..713800 Lactobacillus plantarum JDM1 8188667 YP_003062252.1 CDS glnQ1 NC_012984.1 713803 714537 D glutamine ABC transporter, ATP-binding protein 713803..714537 Lactobacillus plantarum JDM1 8188668 YP_003062253.1 CDS JDM1_0668 NC_012984.1 714811 715374 R hypothetical protein complement(714811..715374) Lactobacillus plantarum JDM1 8188669 YP_003062254.1 CDS JDM1_0669 NC_012984.1 715398 716267 R HAD superfamily hydrolase complement(715398..716267) Lactobacillus plantarum JDM1 8188670 YP_003062255.1 CDS ung NC_012984.1 716383 717075 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 716383..717075 Lactobacillus plantarum JDM1 8188671 YP_003062256.1 CDS eutD NC_012984.1 717099 718076 D in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase 717099..718076 Lactobacillus plantarum JDM1 8188672 YP_003062257.1 CDS JDM1_0672 NC_012984.1 718186 718647 D hypothetical protein 718186..718647 Lactobacillus plantarum JDM1 8188673 YP_003062258.1 CDS JDM1_0673 NC_012984.1 718653 719168 D acetyltransferase () 718653..719168 Lactobacillus plantarum JDM1 8188674 YP_003062259.1 CDS JDM1_0674 NC_012984.1 719392 719913 R DNA-directed DNA polymerase III, epsilon chain () complement(719392..719913) Lactobacillus plantarum JDM1 8188675 YP_003062260.1 CDS exoA NC_012984.1 719991 720755 R exodeoxyribonuclease III complement(719991..720755) Lactobacillus plantarum JDM1 8188676 YP_003062261.1 CDS JDM1_0676 NC_012984.1 721077 721979 D oxidoreductase () 721077..721979 Lactobacillus plantarum JDM1 8188677 YP_003062262.1 CDS murB NC_012984.1 722151 723059 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 722151..723059 Lactobacillus plantarum JDM1 8188678 YP_003062263.1 CDS JDM1_0678 NC_012984.1 723093 725222 D Na(+)/H(+) antiporter () 723093..725222 Lactobacillus plantarum JDM1 8188679 YP_003062264.1 CDS JDM1_0679 NC_012984.1 725361 725873 D transcription regulator () 725361..725873 Lactobacillus plantarum JDM1 8188680 YP_003062265.1 CDS JDM1_0680 NC_012984.1 725949 726614 R hypothetical protein complement(725949..726614) Lactobacillus plantarum JDM1 8188681 YP_003062266.1 CDS JDM1_0681 NC_012984.1 726799 727641 D hypothetical protein 726799..727641 Lactobacillus plantarum JDM1 8188682 YP_003062267.1 CDS JDM1_0682 NC_012984.1 727638 728615 D hypothetical protein 727638..728615 Lactobacillus plantarum JDM1 8188683 YP_003062268.1 CDS glmM NC_012984.1 728647 730002 D catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 728647..730002 Lactobacillus plantarum JDM1 8188684 YP_003062269.1 CDS glmS1 NC_012984.1 730521 732338 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 730521..732338 Lactobacillus plantarum JDM1 8188685 YP_003062270.1 CDS JDM1_0685 NC_012984.1 732532 733203 D diguanylate cyclase/phosphodiesterase domain-containing protein 732532..733203 Lactobacillus plantarum JDM1 8188686 YP_003062271.1 CDS JDM1_0686 NC_012984.1 733334 734149 D HAD superfamily hydrolase 733334..734149 Lactobacillus plantarum JDM1 8188687 YP_003062272.1 CDS isp2 NC_012984.1 734324 735991 D transposase 734324..735991 Lactobacillus plantarum JDM1 8188688 YP_003062273.1 CDS JDM1_0687 NC_012984.1 735983 736570 R transcription regulator () complement(735983..736570) Lactobacillus plantarum JDM1 8188690 YP_003062274.1 CDS galM1 NC_012984.1 736905 737954 R aldose 1-epimerase complement(736905..737954) Lactobacillus plantarum JDM1 8188689 YP_003062275.1 CDS JDM1_0690 NC_012984.1 738624 738938 D hypothetical protein 738624..738938 Lactobacillus plantarum JDM1 8188691 YP_003062276.1 CDS JDM1_0691 NC_012984.1 739184 739609 D hypothetical protein 739184..739609 Lactobacillus plantarum JDM1 8188692 YP_003062277.1 CDS JDM1_0692 NC_012984.1 739610 740362 D nitro/flavin reductase 739610..740362 Lactobacillus plantarum JDM1 8188693 YP_003062278.1 CDS JDM1_0693 NC_012984.1 740656 741855 D hypothetical protein 740656..741855 Lactobacillus plantarum JDM1 8188694 YP_003062279.1 CDS glpK NC_012984.1 742893 744419 R Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase complement(742893..744419) Lactobacillus plantarum JDM1 8188695 YP_003062280.1 CDS JDM1_0695 NC_012984.1 744724 745506 D hypothetical protein 744724..745506 Lactobacillus plantarum JDM1 8188696 YP_003062281.1 CDS nrpR1 NC_012984.1 745900 746322 D negative regulator of proteolysis 745900..746322 Lactobacillus plantarum JDM1 8188698 YP_003062282.1 CDS JDM1_0697 NC_012984.1 746590 746820 D hypothetical protein 746590..746820 Lactobacillus plantarum JDM1 8188699 YP_003062283.1 CDS JDM1_0698 NC_012984.1 746988 747500 R hypothetical protein complement(746988..747500) Lactobacillus plantarum JDM1 8188700 YP_003062284.1 CDS JDM1_0699 NC_012984.1 747616 749070 R transport protein complement(747616..749070) Lactobacillus plantarum JDM1 8188701 YP_003062285.1 CDS ppx2 NC_012984.1 749219 750172 R exopolyphosphatase complement(749219..750172) Lactobacillus plantarum JDM1 8188702 YP_003062286.1 CDS ppk NC_012984.1 750175 752331 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(750175..752331) Lactobacillus plantarum JDM1 8188703 YP_003062287.1 CDS ppx3 NC_012984.1 752332 753861 R exopolyphosphatase complement(752332..753861) Lactobacillus plantarum JDM1 8188704 YP_003062288.1 CDS licD NC_012984.1 754182 754991 R lipopolysaccharide biosynthesis protein LicD complement(754182..754991) Lactobacillus plantarum JDM1 8188705 YP_003062289.1 CDS JDM1_0704 NC_012984.1 755160 755633 D transcription regulator 755160..755633 Lactobacillus plantarum JDM1 8188706 YP_003062290.1 CDS JDM1_0705 NC_012984.1 755848 756009 R hypothetical protein complement(755848..756009) Lactobacillus plantarum JDM1 8188707 YP_003062291.1 CDS JDM1_0706 NC_012984.1 756289 757596 D transport protein 756289..757596 Lactobacillus plantarum JDM1 8188708 YP_003062292.1 CDS pox1 NC_012984.1 758213 759952 D pyruvate oxidase 758213..759952 Lactobacillus plantarum JDM1 8188709 YP_003062293.1 CDS ribC1 NC_012984.1 760093 760941 D bifunctional protein: riboflavin kinase; FMN adenylyltransferase 760093..760941 Lactobacillus plantarum JDM1 8188710 YP_003062294.1 CDS JDM1_0709 NC_012984.1 761273 761854 D pyruvate oxidase 761273..761854 Lactobacillus plantarum JDM1 8188711 YP_003062295.1 CDS JDM1_0710 NC_012984.1 761857 763020 D pyruvate oxidase 761857..763020 Lactobacillus plantarum JDM1 8188712 YP_003062296.1 CDS pepR1 NC_012984.1 763142 764050 R prolyl aminopeptidase complement(763142..764050) Lactobacillus plantarum JDM1 8188713 YP_003062297.1 CDS birA2 NC_012984.1 764505 765494 D biotin-(acetyl-CoA-carboxylase)ligase and biotin operon repressor 764505..765494 Lactobacillus plantarum JDM1 8188714 YP_003062298.1 CDS JDM1_0713 NC_012984.1 765916 767898 D acyltransferase 765916..767898 Lactobacillus plantarum JDM1 8188715 YP_003062299.1 CDS pepX NC_012984.1 768063 770504 R catalyzes the removal of N-terminal dipeptides when proline is the penultimate residue; x-prolyl-dipeptidyl aminopeptidase complement(768063..770504) Lactobacillus plantarum JDM1 8188716 YP_003062300.1 CDS JDM1_0715 NC_012984.1 770639 771043 D redox protein, regulator of disulfide bond formation () 770639..771043 Lactobacillus plantarum JDM1 8188717 YP_003062301.1 CDS JDM1_0717 NC_012984.1 771614 773011 R amino acid transport protein () complement(771614..773011) Lactobacillus plantarum JDM1 8188719 YP_003062302.1 CDS JDM1_0718 NC_012984.1 773517 773990 D hypothetical protein 773517..773990 Lactobacillus plantarum JDM1 8188720 YP_003062303.1 CDS pdx NC_012984.1 774354 775172 D pyridoxal kinase 774354..775172 Lactobacillus plantarum JDM1 8190306 YP_003062304.1 CDS JDM1_0720 NC_012984.1 775226 775645 D hypothetical protein 775226..775645 Lactobacillus plantarum JDM1 8190307 YP_003062305.1 CDS JDM1_0721 NC_012984.1 775722 775925 R hypothetical protein complement(775722..775925) Lactobacillus plantarum JDM1 8190308 YP_003062306.1 CDS gmk2 NC_012984.1 776022 776603 D guanylate kinase 776022..776603 Lactobacillus plantarum JDM1 8190309 YP_003062307.1 CDS JDM1_0723 NC_012984.1 776714 777157 D metal uptake regulator 776714..777157 Lactobacillus plantarum JDM1 8190310 YP_003062308.1 CDS JDM1_0724 NC_012984.1 777290 777808 D hypothetical protein 777290..777808 Lactobacillus plantarum JDM1 8190311 YP_003062309.1 CDS JDM1_0725 NC_012984.1 777812 778630 D hypothetical protein 777812..778630 Lactobacillus plantarum JDM1 8190312 YP_003062310.1 CDS gph1 NC_012984.1 778927 779553 R phosphoglycolate phosphatase () complement(778927..779553) Lactobacillus plantarum JDM1 8190313 YP_003062311.1 CDS JDM1_0727 NC_012984.1 779875 781149 D bifunctional protein: amino acid aminotransferase; 2-hydroxyacid dehydrogenase 779875..781149 Lactobacillus plantarum JDM1 8190314 YP_003062312.1 CDS JDM1_0728 NC_012984.1 781152 782144 D bifunctional protein: amino acid aminotransferase; 2-hydroxyacid dehydrogenase 781152..782144 Lactobacillus plantarum JDM1 8190315 YP_003062313.1 CDS JDM1_0729 NC_012984.1 782378 782629 R hypothetical protein complement(782378..782629) Lactobacillus plantarum JDM1 8190316 YP_003062314.1 CDS JDM1_0730 NC_012984.1 782849 783028 D hypothetical protein 782849..783028 Lactobacillus plantarum JDM1 8190317 YP_003062315.1 CDS glnQ2 NC_012984.1 783168 783902 D glutamine ABC transporter, ATP-binding protein 783168..783902 Lactobacillus plantarum JDM1 8190318 YP_003062316.1 CDS glnH1 NC_012984.1 783923 784759 D glutamine ABC transporter, substrate binding protein 783923..784759 Lactobacillus plantarum JDM1 8190319 YP_003062317.1 CDS glnM NC_012984.1 784759 785400 D glutamine ABC transporter, permease protein 784759..785400 Lactobacillus plantarum JDM1 8190320 YP_003062318.1 CDS glnP NC_012984.1 785417 786070 D glutamine ABC transporter, permease protein 785417..786070 Lactobacillus plantarum JDM1 8189822 YP_003062319.1 CDS pts11A NC_012984.1 786332 786826 D PTS, EIIA () 786332..786826 Lactobacillus plantarum JDM1 8189195 YP_003062320.1 CDS bglG1 NC_012984.1 786852 787694 D transcription antiterminator 786852..787694 Lactobacillus plantarum JDM1 8189196 YP_003062321.1 CDS pts11BC NC_012984.1 787722 789173 D beta-glucosides PTS, EIIBC 787722..789173 Lactobacillus plantarum JDM1 8189197 YP_003062322.1 CDS JDM1_0738 NC_012984.1 789180 789938 D hypothetical protein 789180..789938 Lactobacillus plantarum JDM1 8189198 YP_003062323.1 CDS JDM1_0739 NC_012984.1 790073 791404 R amino acid transport protein complement(790073..791404) Lactobacillus plantarum JDM1 8189199 YP_003062324.1 CDS JDM1_0740 NC_012984.1 791675 792115 R transcription regulator complement(791675..792115) Lactobacillus plantarum JDM1 8189200 YP_003062325.1 CDS JDM1_0741 NC_012984.1 792386 793267 D hypothetical protein 792386..793267 Lactobacillus plantarum JDM1 8189201 YP_003062326.1 CDS JDM1_0742 NC_012984.1 793404 793844 D transcription regulator () 793404..793844 Lactobacillus plantarum JDM1 8189202 YP_003062327.1 CDS JDM1_0743 NC_012984.1 793841 794998 D multidrug transport protein 793841..794998 Lactobacillus plantarum JDM1 8189203 YP_003062328.1 CDS JDM1_0744 NC_012984.1 795118 795879 R transport protein complement(795118..795879) Lactobacillus plantarum JDM1 8189204 YP_003062329.1 CDS JDM1_0745 NC_012984.1 795964 796524 D transcription regulator () 795964..796524 Lactobacillus plantarum JDM1 8189205 YP_003062330.1 CDS JDM1_0746 NC_012984.1 796637 797932 R GTPase complement(796637..797932) Lactobacillus plantarum JDM1 8189206 YP_003062331.1 CDS JDM1_0747 NC_012984.1 798021 798458 D NTP pyrophosphohydrolase () 798021..798458 Lactobacillus plantarum JDM1 8189207 YP_003062332.1 CDS sugE NC_012984.1 798600 798914 D molecular chaperone GroEL 798600..798914 Lactobacillus plantarum JDM1 8189208 YP_003062333.1 CDS JDM1_0749 NC_012984.1 799220 799420 D hypothetical protein 799220..799420 Lactobacillus plantarum JDM1 8189209 YP_003062334.1 CDS pgm3 NC_012984.1 799737 800414 R phosphoglycerate mutase complement(799737..800414) Lactobacillus plantarum JDM1 8189210 YP_003062335.1 CDS pgm4 NC_012984.1 800429 801085 R phosphoglycerate mutase complement(800429..801085) Lactobacillus plantarum JDM1 8189211 YP_003062336.1 CDS napA2 NC_012984.1 801156 803012 R Na(+)/H(+) antiporter complement(801156..803012) Lactobacillus plantarum JDM1 8189212 YP_003062337.1 CDS JDM1_0753 NC_012984.1 803034 804107 R 7,8-dihydro-8-oxoguanine-triphosphatase complement(803034..804107) Lactobacillus plantarum JDM1 8189213 YP_003062338.1 CDS bglG2 NC_012984.1 804261 805103 D transcription antiterminator 804261..805103 Lactobacillus plantarum JDM1 8189214 YP_003062339.1 CDS pts12BCA NC_012984.1 805115 806977 D beta-glucosides PTS, EIIBCA 805115..806977 Lactobacillus plantarum JDM1 8189215 YP_003062340.1 CDS pbg2 NC_012984.1 806992 808494 D 6-phospho-beta-glucosidase 806992..808494 Lactobacillus plantarum JDM1 8189216 YP_003062341.1 CDS JDM1_0757 NC_012984.1 808545 809216 R DedA protein complement(808545..809216) Lactobacillus plantarum JDM1 8189217 YP_003062342.1 CDS JDM1_0758 NC_012984.1 809421 811727 D DNA helicase () 809421..811727 Lactobacillus plantarum JDM1 8189218 YP_003062343.1 CDS JDM1_0759 NC_012984.1 812022 812951 D 2-nitropropane dioxygenase 812022..812951 Lactobacillus plantarum JDM1 8189219 YP_003062344.1 CDS coaA NC_012984.1 813120 814049 D catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 813120..814049 Lactobacillus plantarum JDM1 8189220 YP_003062345.1 CDS guaA NC_012984.1 814143 815699 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 814143..815699 Lactobacillus plantarum JDM1 8189221 YP_003062346.1 CDS JDM1_0762 NC_012984.1 816025 816393 R hypothetical protein complement(816025..816393) Lactobacillus plantarum JDM1 8189222 YP_003062347.1 CDS JDM1_0763 NC_012984.1 816627 816995 R transcription regulator complement(816627..816995) Lactobacillus plantarum JDM1 8189223 YP_003062348.1 CDS JDM1_0764 NC_012984.1 817532 820495 D hypothetical protein 817532..820495 Lactobacillus plantarum JDM1 8189224 YP_003062349.1 CDS JDM1_0765 NC_012984.1 820797 821489 D CAAX family protease 820797..821489 Lactobacillus plantarum JDM1 8189225 YP_003062350.1 CDS JDM1_0766 NC_012984.1 821709 822053 D transcription regulator () 821709..822053 Lactobacillus plantarum JDM1 8189226 YP_003062351.1 CDS JDM1_0767 NC_012984.1 822185 823483 R transport protein complement(822185..823483) Lactobacillus plantarum JDM1 8189227 YP_003062352.1 CDS JDM1_0768 NC_012984.1 823757 826261 D cell surface protein precursor 823757..826261 Lactobacillus plantarum JDM1 8189228 YP_003062353.1 CDS JDM1_0769 NC_012984.1 826746 827129 D hypothetical protein 826746..827129 Lactobacillus plantarum JDM1 8189229 YP_003062354.1 CDS JDM1_0770 NC_012984.1 827119 828966 D acyltransferase 827119..828966 Lactobacillus plantarum JDM1 8189230 YP_003062355.1 CDS JDM1_0771 NC_012984.1 829207 829461 D hypothetical protein 829207..829461 Lactobacillus plantarum JDM1 8189231 YP_003062356.1 CDS JDM1_0772 NC_012984.1 829473 830018 D hypothetical protein 829473..830018 Lactobacillus plantarum JDM1 8189232 YP_003062357.1 CDS JDM1_0773 NC_012984.1 830031 830213 D hypothetical protein 830031..830213 Lactobacillus plantarum JDM1 8189233 YP_003062358.1 CDS asp1 NC_012984.1 830228 830650 D alkaline shock protein 830228..830650 Lactobacillus plantarum JDM1 8189234 YP_003062359.1 CDS asp2 NC_012984.1 830672 831151 D alkaline shock protein 830672..831151 Lactobacillus plantarum JDM1 8189235 YP_003062360.1 CDS hpaG NC_012984.1 831325 832155 D 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 831325..832155 Lactobacillus plantarum JDM1 8189236 YP_003062361.1 CDS JDM1_0777 NC_012984.1 832286 833296 D lipoprotein precursor 832286..833296 Lactobacillus plantarum JDM1 8189237 YP_003062362.1 CDS JDM1_0778 NC_012984.1 833613 833945 D hypothetical protein 833613..833945 Lactobacillus plantarum JDM1 8189238 YP_003062363.1 CDS JDM1_0779 NC_012984.1 834051 834623 D hypothetical protein 834051..834623 Lactobacillus plantarum JDM1 8189239 YP_003062364.1 CDS pepN NC_012984.1 834805 837339 D alanine aminopeptidase 834805..837339 Lactobacillus plantarum JDM1 8189240 YP_003062365.1 CDS JDM1_0781 NC_012984.1 837481 839271 D hypothetical protein 837481..839271 Lactobacillus plantarum JDM1 8189241 YP_003062366.1 CDS JDM1_0782 NC_012984.1 839277 839594 D hypothetical protein 839277..839594 Lactobacillus plantarum JDM1 8189242 YP_003062367.1 CDS JDM1_0783 NC_012984.1 839958 840488 R hypothetical protein complement(839958..840488) Lactobacillus plantarum JDM1 8189243 YP_003062368.1 CDS JDM1_0784 NC_012984.1 840603 844376 R hypothetical protein complement(840603..844376) Lactobacillus plantarum JDM1 8189244 YP_003062369.1 CDS JDM1_0785 NC_012984.1 844582 844704 D hypothetical protein 844582..844704 Lactobacillus plantarum JDM1 8189245 YP_003062370.1 CDS JDM1_0786 NC_012984.1 844793 845287 D hypothetical protein 844793..845287 Lactobacillus plantarum JDM1 8189246 YP_003062371.1 CDS JDM1_0787 NC_012984.1 845356 846108 D hypothetical protein 845356..846108 Lactobacillus plantarum JDM1 8189247 YP_003062372.1 CDS JDM1_0788 NC_012984.1 846208 846759 D transcription regulator 846208..846759 Lactobacillus plantarum JDM1 8189248 YP_003062373.1 CDS JDM1_0789 NC_012984.1 846830 847756 R transcription regulator complement(846830..847756) Lactobacillus plantarum JDM1 8189249 YP_003062374.1 CDS JDM1_0790 NC_012984.1 847943 849832 D fumarate reductase, flavoprotein subunit precursor 847943..849832 Lactobacillus plantarum JDM1 8189250 YP_003062375.1 CDS JDM1_0791 NC_012984.1 850108 850581 R transcription regulator complement(850108..850581) Lactobacillus plantarum JDM1 8189251 YP_003062376.1 CDS JDM1_0792 NC_012984.1 850690 851319 R ACP phosphodieterase complement(850690..851319) Lactobacillus plantarum JDM1 8189252 YP_003062377.1 CDS asnC NC_012984.1 851489 852784 R catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase complement(851489..852784) Lactobacillus plantarum JDM1 8189253 YP_003062378.1 CDS asnA NC_012984.1 852823 853830 R catalyzes the formation of asparagine from aspartate and ammonia; asparagine synthetase AsnA complement(852823..853830) Lactobacillus plantarum JDM1 8189254 YP_003062379.1 CDS pepD3 NC_012984.1 854283 855689 R dipeptidase complement(854283..855689) Lactobacillus plantarum JDM1 8189255 YP_003062380.1 CDS JDM1_0796 NC_012984.1 855725 856963 R hypothetical protein complement(855725..856963) Lactobacillus plantarum JDM1 8189256 YP_003062381.1 CDS JDM1_0797 NC_012984.1 857476 857691 D hypothetical protein 857476..857691 Lactobacillus plantarum JDM1 8189257 YP_003062382.1 CDS recQ1 NC_012984.1 857949 859757 D ATP-dependent DNA helicase RecQ 857949..859757 Lactobacillus plantarum JDM1 8189258 YP_003062383.1 CDS rluE NC_012984.1 859800 860681 D pseudouridylate synthase 859800..860681 Lactobacillus plantarum JDM1 8189259 YP_003062384.1 CDS JDM1_0800 NC_012984.1 860873 861199 R transcription regulator complement(860873..861199) Lactobacillus plantarum JDM1 8189260 YP_003062385.1 CDS JDM1_0801 NC_012984.1 861534 862316 D hypothetical protein 861534..862316 Lactobacillus plantarum JDM1 8189261 YP_003062386.1 CDS JDM1_0802 NC_012984.1 862736 863737 D hypothetical protein 862736..863737 Lactobacillus plantarum JDM1 8189262 YP_003062387.1 CDS JDM1_0803 NC_012984.1 863701 864951 D hypothetical protein 863701..864951 Lactobacillus plantarum JDM1 8189263 YP_003062388.1 CDS JDM1_0804 NC_012984.1 864948 865712 D hypothetical protein 864948..865712 Lactobacillus plantarum JDM1 8189264 YP_003062389.1 CDS JDM1_0805 NC_012984.1 865709 866332 D acetyltransferase () 865709..866332 Lactobacillus plantarum JDM1 8189265 YP_003062390.1 CDS JDM1_0806 NC_012984.1 866464 867132 D alpha-ribazole-5'-phosphate phosphatase 866464..867132 Lactobacillus plantarum JDM1 8189266 YP_003062391.1 CDS JDM1_0807 NC_012984.1 867341 867670 R hypothetical protein complement(867341..867670) Lactobacillus plantarum JDM1 8189267 YP_003062392.1 CDS JDM1_0808 NC_012984.1 867814 868827 R lipase/esterase complement(867814..868827) Lactobacillus plantarum JDM1 8189268 YP_003062393.1 CDS JDM1_0809 NC_012984.1 868814 869455 R sugar transport protein complement(868814..869455) Lactobacillus plantarum JDM1 8189269 YP_003062394.1 CDS JDM1_0810 NC_012984.1 869483 870214 R sugar transport protein complement(869483..870214) Lactobacillus plantarum JDM1 8189270 YP_003062395.1 CDS murE1 NC_012984.1 870552 872033 R UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diami nopimelate ligase complement(870552..872033) Lactobacillus plantarum JDM1 8189271 YP_003062396.1 CDS thrA1 NC_012984.1 872228 873430 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive; aspartate kinase complement(872228..873430) Lactobacillus plantarum JDM1 8189272 YP_003062397.1 CDS asnB1 NC_012984.1 873435 875336 R asparagine synthase complement(873435..875336) Lactobacillus plantarum JDM1 8189273 YP_003062398.1 CDS JDM1_0814 NC_012984.1 875807 876133 R hypothetical protein complement(875807..876133) Lactobacillus plantarum JDM1 8188231 YP_003062399.1 CDS JDM1_0815 NC_012984.1 876130 876831 R amino acid transport protein complement(876130..876831) Lactobacillus plantarum JDM1 8188721 YP_003062400.1 CDS JDM1_0816 NC_012984.1 877162 877380 D hypothetical protein 877162..877380 Lactobacillus plantarum JDM1 8188722 YP_003062401.1 CDS JDM1_0817 NC_012984.1 878364 879107 D lipoprotein precursor 878364..879107 Lactobacillus plantarum JDM1 8188723 YP_003062402.1 CDS JDM1_0818 NC_012984.1 879085 879507 D hypothetical protein 879085..879507 Lactobacillus plantarum JDM1 8188724 YP_003062403.1 CDS JDM1_0819 NC_012984.1 879690 879947 R hypothetical protein complement(879690..879947) Lactobacillus plantarum JDM1 8188725 YP_003062404.1 CDS JDM1_0820 NC_012984.1 880277 880999 R hypothetical protein complement(880277..880999) Lactobacillus plantarum JDM1 8188726 YP_003062405.1 CDS JDM1_0821 NC_012984.1 880999 882477 R multidrug transport protein complement(880999..882477) Lactobacillus plantarum JDM1 8188727 YP_003062406.1 CDS JDM1_0822 NC_012984.1 882607 883071 D hypothetical protein 882607..883071 Lactobacillus plantarum JDM1 8188728 YP_003062407.1 CDS JDM1_0823 NC_012984.1 883317 883460 R hypothetical protein complement(883317..883460) Lactobacillus plantarum JDM1 8188729 YP_003062408.1 CDS JDM1_0824 NC_012984.1 883575 883919 R hypothetical protein complement(883575..883919) Lactobacillus plantarum JDM1 8188730 YP_003062409.1 CDS JDM1_0825 NC_012984.1 884131 884778 D metal-dependent regulator 884131..884778 Lactobacillus plantarum JDM1 8188731 YP_003062410.1 CDS cspC NC_012984.1 885030 885230 D cold shock protein CspC 885030..885230 Lactobacillus plantarum JDM1 8188732 YP_003062411.1 CDS JDM1_0827 NC_012984.1 885399 886148 D hypothetical protein 885399..886148 Lactobacillus plantarum JDM1 8188733 YP_003062412.1 CDS JDM1_0828 NC_012984.1 886182 886643 D hypothetical protein 886182..886643 Lactobacillus plantarum JDM1 8188734 YP_003062413.1 CDS JDM1_0829 NC_012984.1 886929 887966 R transcription regulator complement(886929..887966) Lactobacillus plantarum JDM1 8188735 YP_003062414.1 CDS JDM1_0830 NC_012984.1 888227 888889 D phosphatase () 888227..888889 Lactobacillus plantarum JDM1 8188736 YP_003062415.1 CDS JDM1_0831 NC_012984.1 889074 889868 R lipase/esterase complement(889074..889868) Lactobacillus plantarum JDM1 8188737 YP_003062416.1 CDS JDM1_0832 NC_012984.1 889931 890476 D acetyltransferase () 889931..890476 Lactobacillus plantarum JDM1 8188738 YP_003062417.1 CDS JDM1_0833 NC_012984.1 890488 891012 D transcription regulator () 890488..891012 Lactobacillus plantarum JDM1 8188739 YP_003062418.1 CDS als NC_012984.1 891198 892880 D catalyzes the formation of 2-acetolactate from pyruvate in stationary phase; acetolactate synthase 891198..892880 Lactobacillus plantarum JDM1 8188740 YP_003062419.1 CDS lysP NC_012984.1 893264 894715 D lysine transport protein 893264..894715 Lactobacillus plantarum JDM1 8188741 YP_003062420.1 CDS dacB NC_012984.1 895062 895835 D serine-type D-Ala-D-Ala carboxypeptidase 895062..895835 Lactobacillus plantarum JDM1 8188742 YP_003062421.1 CDS dgk1 NC_012984.1 896218 896853 D deoxyguanosine kinase 896218..896853 Lactobacillus plantarum JDM1 8188743 YP_003062422.1 CDS serS2 NC_012984.1 897136 898413 D catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 897136..898413 Lactobacillus plantarum JDM1 8188744 YP_003062423.1 CDS ctsR NC_012984.1 899958 900425 D transcription regulator 899958..900425 Lactobacillus plantarum JDM1 8188752 YP_003062424.1 CDS clpC NC_012984.1 900444 902948 D ATP-dependent Clp protease, ATP-binding subunit ClpC 900444..902948 Lactobacillus plantarum JDM1 8188753 YP_003062425.1 CDS JDM1_0841 NC_012984.1 903127 903729 D transcription regulator () 903127..903729 Lactobacillus plantarum JDM1 8188754 YP_003062426.1 CDS rpoB NC_012984.1 903976 907590 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 903976..907590 Lactobacillus plantarum JDM1 8188755 YP_003062427.1 CDS rpoC NC_012984.1 907608 911249 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 907608..911249 Lactobacillus plantarum JDM1 8188756 YP_003062428.1 CDS JDM1_0844 NC_012984.1 911903 912583 R type 4 prepilin-like proteins leader peptide processing enzyme complement(911903..912583) Lactobacillus plantarum JDM1 8188757 YP_003062429.1 CDS rpsL NC_012984.1 912846 913259 D interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 912846..913259 Lactobacillus plantarum JDM1 8188758 YP_003062430.1 CDS rpsG NC_012984.1 913276 913746 D binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 913276..913746 Lactobacillus plantarum JDM1 8188759 YP_003062431.1 CDS fusA2 NC_012984.1 913888 915984 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 913888..915984 Lactobacillus plantarum JDM1 8188760 YP_003062432.1 CDS JDM1_0848 NC_012984.1 916797 916892 R hypothetical protein complement(916797..916892) Lactobacillus plantarum JDM1 8188761 YP_003062433.1 CDS rpsJ NC_012984.1 916936 917244 D NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 916936..917244 Lactobacillus plantarum JDM1 8188762 YP_003062434.1 CDS rplC NC_012984.1 917282 917911 D binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 917282..917911 Lactobacillus plantarum JDM1 8188763 YP_003062435.1 CDS rplD NC_012984.1 917930 918553 D L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 917930..918553 Lactobacillus plantarum JDM1 8188764 YP_003062436.1 CDS rplW NC_012984.1 918553 918846 D binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 918553..918846 Lactobacillus plantarum JDM1 8188765 YP_003062437.1 CDS rplB NC_012984.1 918870 919709 D one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 918870..919709 Lactobacillus plantarum JDM1 8188766 YP_003062438.1 CDS rpsS NC_012984.1 919752 920027 D protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 919752..920027 Lactobacillus plantarum JDM1 8188767 YP_003062439.1 CDS rplV NC_012984.1 920048 920395 D binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 920048..920395 Lactobacillus plantarum JDM1 8188768 YP_003062440.1 CDS rpsC NC_012984.1 920408 921061 D forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 920408..921061 Lactobacillus plantarum JDM1 8188769 YP_003062441.1 CDS rplP NC_012984.1 921064 921498 D located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 921064..921498 Lactobacillus plantarum JDM1 8188770 YP_003062442.1 CDS rpmC NC_012984.1 921488 921682 D one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 921488..921682 Lactobacillus plantarum JDM1 8188771 YP_003062443.1 CDS rpsQ NC_012984.1 921705 921974 D primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 921705..921974 Lactobacillus plantarum JDM1 8188772 YP_003062444.1 CDS rplN NC_012984.1 922017 922385 D 50S ribosomal protein L14 922017..922385 Lactobacillus plantarum JDM1 8188773 YP_003062445.1 CDS rplX NC_012984.1 922419 922730 D assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 922419..922730 Lactobacillus plantarum JDM1 8188774 YP_003062446.1 CDS rplE NC_012984.1 922759 923301 D part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 922759..923301 Lactobacillus plantarum JDM1 8188775 YP_003062447.1 CDS rpsN NC_012984.1 923322 923507 D ribosomal protein S14 923322..923507 Lactobacillus plantarum JDM1 8188776 YP_003062448.1 CDS rpsH NC_012984.1 923541 923936 D binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 923541..923936 Lactobacillus plantarum JDM1 8188777 YP_003062449.1 CDS rplF NC_012984.1 923966 924502 D ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 923966..924502 Lactobacillus plantarum JDM1 8188778 YP_003062450.1 CDS rplR NC_012984.1 924537 924902 D 50S ribosomal protein L18 924537..924902 Lactobacillus plantarum JDM1 8188779 YP_003062451.1 CDS rpsE NC_012984.1 924923 925423 D located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 924923..925423 Lactobacillus plantarum JDM1 8188780 YP_003062452.1 CDS rpmD NC_012984.1 925438 925620 D L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 925438..925620 Lactobacillus plantarum JDM1 8188781 YP_003062453.1 CDS rplO NC_012984.1 925652 926083 D 50S ribosomal protein L15 925652..926083 Lactobacillus plantarum JDM1 8188782 YP_003062454.1 CDS secY NC_012984.1 926085 927380 D forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 926085..927380 Lactobacillus plantarum JDM1 8188783 YP_003062455.1 CDS adk NC_012984.1 927444 928094 D adenylate kinase 927444..928094 Lactobacillus plantarum JDM1 8188784 YP_003062456.1 CDS infA NC_012984.1 928269 928487 D translation initiation factor IF-1 928269..928487 Lactobacillus plantarum JDM1 8188785 YP_003062457.1 CDS rpmJ NC_012984.1 928524 928643 D smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 928524..928643 Lactobacillus plantarum JDM1 8188786 YP_003062458.1 CDS rpsM NC_012984.1 928671 929036 D located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 928671..929036 Lactobacillus plantarum JDM1 8188787 YP_003062459.1 CDS rpsK NC_012984.1 929061 929450 D located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 929061..929450 Lactobacillus plantarum JDM1 8188788 YP_003062460.1 CDS rpoA NC_012984.1 929537 930481 D catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 929537..930481 Lactobacillus plantarum JDM1 8188789 YP_003062461.1 CDS rplQ NC_012984.1 930503 930886 D ribosomal protein L17 930503..930886 Lactobacillus plantarum JDM1 8188790 YP_003062462.1 CDS hepB1 NC_012984.1 931290 932282 R trans-hexaprenyltranstransferase, component II complement(931290..932282) Lactobacillus plantarum JDM1 8188791 YP_003062463.1 CDS JDM1_0879 NC_012984.1 932288 932857 R hypothetical protein complement(932288..932857) Lactobacillus plantarum JDM1 8188792 YP_003062464.1 CDS JDM1_0880 NC_012984.1 932861 933352 R hypothetical protein complement(932861..933352) Lactobacillus plantarum JDM1 8188793 YP_003062465.1 CDS ndh2 NC_012984.1 933446 935356 R NADH dehydrogenase complement(933446..935356) Lactobacillus plantarum JDM1 8188794 YP_003062466.1 CDS JDM1_0882 NC_012984.1 935639 936565 D lipoprotein precursor 935639..936565 Lactobacillus plantarum JDM1 8188795 YP_003062467.1 CDS apbE1 NC_012984.1 936905 938017 D thiamin biosynthesis lipoprotein ApbE 936905..938017 Lactobacillus plantarum JDM1 8188796 YP_003062468.1 CDS cbiO NC_012984.1 938100 938945 D with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene; cobalt transporter ATP-binding subunit 938100..938945 Lactobacillus plantarum JDM1 8188797 YP_003062469.1 CDS cbiO NC_012984.1 938921 939808 D with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene; cobalt transporter ATP-binding subunit 938921..939808 Lactobacillus plantarum JDM1 8188798 YP_003062470.1 CDS JDM1_0886 NC_012984.1 939798 940598 D ABC transporter permease 939798..940598 Lactobacillus plantarum JDM1 8188799 YP_003062471.1 CDS truA NC_012984.1 940663 941451 D mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 940663..941451 Lactobacillus plantarum JDM1 8188800 YP_003062472.1 CDS rplM NC_012984.1 941560 942003 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 941560..942003 Lactobacillus plantarum JDM1 8187444 YP_003062473.1 CDS rpsI NC_012984.1 942017 942409 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 942017..942409 Lactobacillus plantarum JDM1 8187651 YP_003062474.1 CDS JDM1_0890 NC_012984.1 942672 943541 R DegV family protein complement(942672..943541) Lactobacillus plantarum JDM1 8187652 YP_003062475.1 CDS JDM1_0891 NC_012984.1 943826 944914 R hypothetical protein complement(943826..944914) Lactobacillus plantarum JDM1 8187653 YP_003062476.1 CDS JDM1_0892 NC_012984.1 945203 946291 D malate/lactate dehydrogenase 945203..946291 Lactobacillus plantarum JDM1 8187654 YP_003062477.1 CDS tkt2 NC_012984.1 947169 949181 D transketolase 947169..949181 Lactobacillus plantarum JDM1 8187655 YP_003062478.1 CDS aroD1 NC_012984.1 949201 950094 D shikimate 5-dehydrogenase 949201..950094 Lactobacillus plantarum JDM1 8187656 YP_003062479.1 CDS aroA NC_012984.1 950135 951130 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 950135..951130 Lactobacillus plantarum JDM1 8187657 YP_003062480.1 CDS aroB NC_012984.1 951134 952219 D catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 951134..952219 Lactobacillus plantarum JDM1 8187658 YP_003062481.1 CDS JDM1_0897 NC_012984.1 952440 952508 D hypothetical protein 952440..952508 Lactobacillus plantarum JDM1 8187659 YP_003062482.1 CDS JDM1_0898 NC_012984.1 952651 954060 R cation transport protein complement(952651..954060) Lactobacillus plantarum JDM1 8187660 YP_003062483.1 CDS JDM1_0899 NC_012984.1 954164 954490 R hypothetical protein complement(954164..954490) Lactobacillus plantarum JDM1 8187661 YP_003062484.1 CDS ttdB NC_012984.1 954554 955165 R Involved in the tartrate degradation pathway; L(+)-tartrate dehydratase subunit beta complement(954554..955165) Lactobacillus plantarum JDM1 8187662 YP_003062485.1 CDS ttdA NC_012984.1 955162 956085 R Involved in the tartrate degradation pathway; tartrate dehydratase subunit alpha complement(955162..956085) Lactobacillus plantarum JDM1 8187663 YP_003062486.1 CDS JDM1_0902 NC_012984.1 956350 957375 R transcription regulator complement(956350..957375) Lactobacillus plantarum JDM1 8187664 YP_003062487.1 CDS citG NC_012984.1 957612 958454 D catalyzes the reversible formation of 2'-(5''-triphosphoribosyl)-3'dephospho-CoA from 3-dephospho-CoA; triphosphoribosyl-dephospho-CoA synthase 957612..958454 Lactobacillus plantarum JDM1 8187665 YP_003062488.1 CDS mtsC NC_012984.1 958767 959522 D manganese ABC transporter, ATP-binding protein 958767..959522 Lactobacillus plantarum JDM1 8187666 YP_003062489.1 CDS mtsB NC_012984.1 959519 960394 D manganese ABC transporter, permease protein 959519..960394 Lactobacillus plantarum JDM1 8187667 YP_003062490.1 CDS mtsA NC_012984.1 960391 961332 D manganese ABC transporter, substrate binding protein 960391..961332 Lactobacillus plantarum JDM1 8187668 YP_003062491.1 CDS JDM1_0907 NC_012984.1 961444 961755 R hypothetical protein complement(961444..961755) Lactobacillus plantarum JDM1 8187669 YP_003062492.1 CDS ldh NC_012984.1 962152 963081 D Converts (S)-lactate and NAD(+) to pyruvate and NADH; L-lactate dehydrogenase 962152..963081 Lactobacillus plantarum JDM1 8187670 YP_003062493.1 CDS JDM1_0909 NC_012984.1 963113 964531 D cation transport protein 963113..964531 Lactobacillus plantarum JDM1 8187671 YP_003062494.1 CDS citR NC_012984.1 964608 965570 R citrate lyase regulator complement(964608..965570) Lactobacillus plantarum JDM1 8187672 YP_003062495.1 CDS mae NC_012984.1 965766 966926 D malic enzyme, NAD-dependent 965766..966926 Lactobacillus plantarum JDM1 8187673 YP_003062496.1 CDS citC NC_012984.1 966944 967999 D (citrate (pro-3S)-lyase) ligase 966944..967999 Lactobacillus plantarum JDM1 8187674 YP_003062497.1 CDS citD NC_012984.1 967989 968279 D acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate; citrate lyase subunit gamma 967989..968279 Lactobacillus plantarum JDM1 8187675 YP_003062498.1 CDS citE NC_012984.1 968279 969193 D citrate lyase, beta chain 968279..969193 Lactobacillus plantarum JDM1 8187676 YP_003062499.1 CDS citF NC_012984.1 969183 970721 D citrate lyase, alpha chain 969183..970721 Lactobacillus plantarum JDM1 8187677 YP_003062500.1 CDS JDM1_0916 NC_012984.1 970921 971202 D hypothetical protein 970921..971202 Lactobacillus plantarum JDM1 8187678 YP_003062501.1 CDS fumC NC_012984.1 971917 973299 D class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 971917..973299 Lactobacillus plantarum JDM1 8187679 YP_003062502.1 CDS JDM1_0918 NC_012984.1 973472 974860 D succinate dehydrogenase 973472..974860 Lactobacillus plantarum JDM1 8187680 YP_003062503.1 CDS citX NC_012984.1 975016 975561 D apo-citrate lyase phosphoribosyl-ft dephospho-CoA transferase 975016..975561 Lactobacillus plantarum JDM1 8187681 YP_003062504.1 CDS mleR2 NC_012984.1 975558 976439 D malolactic regulator () 975558..976439 Lactobacillus plantarum JDM1 8187682 YP_003062505.1 CDS mleR1 NC_012984.1 976625 977518 R malolactic regulator complement(976625..977518) Lactobacillus plantarum JDM1 8187683 YP_003062506.1 CDS mleS NC_012984.1 977693 979336 D malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 977693..979336 Lactobacillus plantarum JDM1 8187684 YP_003062507.1 CDS mleP2 NC_012984.1 979378 980349 D malate transport protein 979378..980349 Lactobacillus plantarum JDM1 8187685 YP_003062508.1 CDS JDM1_0924 NC_012984.1 980851 982278 D amino acid transport protein 980851..982278 Lactobacillus plantarum JDM1 8187686 YP_003062509.1 CDS JDM1_0925 NC_012984.1 982396 982980 D hypothetical protein 982396..982980 Lactobacillus plantarum JDM1 8187687 YP_003062510.1 CDS JDM1_0926 NC_012984.1 983321 986026 R cell surface hydrolase complement(983321..986026) Lactobacillus plantarum JDM1 8187688 YP_003062511.1 CDS cydA NC_012984.1 986451 987890 D cytochrome D ubiquinol oxidase, subunit I 986451..987890 Lactobacillus plantarum JDM1 8187689 YP_003062512.1 CDS cydB NC_012984.1 987883 988878 D cytochrome D ubiquinol oxidase, subunit II 987883..988878 Lactobacillus plantarum JDM1 8187690 YP_003062513.1 CDS cydC NC_012984.1 989007 990740 D cytochrome D ABC transporter, ATP-binding and permease protein 989007..990740 Lactobacillus plantarum JDM1 8187691 YP_003062514.1 CDS cydD NC_012984.1 990740 992500 D cytochrome D ABC transporter, ATP-binding and permease protein 990740..992500 Lactobacillus plantarum JDM1 8187692 YP_003062515.1 CDS JDM1_0931 NC_012984.1 992707 993684 R hypothetical protein complement(992707..993684) Lactobacillus plantarum JDM1 8187693 YP_003062516.1 CDS hepB2 NC_012984.1 993874 994851 R trans-hexaprenyltranstransferase, component II complement(993874..994851) Lactobacillus plantarum JDM1 8187694 YP_003062517.1 CDS JDM1_0933 NC_012984.1 994960 995910 D prenyltransferase 994960..995910 Lactobacillus plantarum JDM1 8187695 YP_003062518.1 CDS JDM1_0934 NC_012984.1 996124 997098 R oxidoreductase () complement(996124..997098) Lactobacillus plantarum JDM1 8187696 YP_003062519.1 CDS acm1 NC_012984.1 997546 998187 D muramidase 997546..998187 Lactobacillus plantarum JDM1 8187697 YP_003062520.1 CDS xpt NC_012984.1 998238 998825 D Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase 998238..998825 Lactobacillus plantarum JDM1 8187698 YP_003062521.1 CDS JDM1_0937 NC_012984.1 998847 999395 D hypothetical protein 998847..999395 Lactobacillus plantarum JDM1 8187699 YP_003062522.1 CDS purK2 NC_012984.1 999508 1000677 D phosphoribosylaminoimidazole carboxylase, ATPase subunit 999508..1000677 Lactobacillus plantarum JDM1 8187700 YP_003062523.1 CDS pcrA NC_012984.1 1001118 1003385 D ATP-dependent DNA helicase PcrA 1001118..1003385 Lactobacillus plantarum JDM1 8187701 YP_003062524.1 CDS ligA NC_012984.1 1003402 1005441 D DNA ligase (NAD+) 1003402..1005441 Lactobacillus plantarum JDM1 8187702 YP_003062525.1 CDS JDM1_0941 NC_012984.1 1005438 1006613 D lipoprotein precursor 1005438..1006613 Lactobacillus plantarum JDM1 8187703 YP_003062526.1 CDS gatC NC_012984.1 1006654 1006974 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 1006654..1006974 Lactobacillus plantarum JDM1 8187704 YP_003062527.1 CDS gatA NC_012984.1 1006974 1008437 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 1006974..1008437 Lactobacillus plantarum JDM1 8187705 YP_003062528.1 CDS gatB NC_012984.1 1008437 1009861 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 1008437..1009861 Lactobacillus plantarum JDM1 8187706 YP_003062529.1 CDS JDM1_0945 NC_012984.1 1009966 1010988 D similar to YegS from E. coli; lipid kinase 1009966..1010988 Lactobacillus plantarum JDM1 8187707 YP_003062530.1 CDS JDM1_0946 NC_012984.1 1011322 1012695 D RNA methyltransferase 1011322..1012695 Lactobacillus plantarum JDM1 8187708 YP_003062531.1 CDS JDM1_0947 NC_012984.1 1013149 1013727 D transcription regulator () 1013149..1013727 Lactobacillus plantarum JDM1 8187709 YP_003062532.1 CDS JDM1_0948 NC_012984.1 1013994 1016333 D cation transporting P-type ATPase 1013994..1016333 Lactobacillus plantarum JDM1 8187710 YP_003062533.1 CDS pts13C NC_012984.1 1016583 1017899 D cellobiose PTS, EIIC 1016583..1017899 Lactobacillus plantarum JDM1 8187711 YP_003062534.1 CDS JDM1_0950 NC_012984.1 1017892 1018776 D cell surface hydrolase () 1017892..1018776 Lactobacillus plantarum JDM1 8187712 YP_003062535.1 CDS JDM1_0951 NC_012984.1 1018901 1019779 D transcription regulator 1018901..1019779 Lactobacillus plantarum JDM1 8187713 YP_003062536.1 CDS lys NC_012984.1 1019804 1020580 D lysozyme () 1019804..1020580 Lactobacillus plantarum JDM1 8187714 YP_003062537.1 CDS JDM1_0953 NC_012984.1 1020736 1021101 R hypothetical protein complement(1020736..1021101) Lactobacillus plantarum JDM1 8187715 YP_003062538.1 CDS cspP NC_012984.1 1021445 1021645 D cold shock protein CspP 1021445..1021645 Lactobacillus plantarum JDM1 8187716 YP_003062539.1 CDS JDM1_0955 NC_012984.1 1021832 1022839 D oxidoreductase () 1021832..1022839 Lactobacillus plantarum JDM1 8187717 YP_003062540.1 CDS rhe2 NC_012984.1 1022852 1024186 D ATP-dependent RNA helicase 1022852..1024186 Lactobacillus plantarum JDM1 8187718 YP_003062541.1 CDS JDM1_0957 NC_012984.1 1024428 1025609 R prophage Lp2 protein 2, integrase complement(1024428..1025609) Lactobacillus plantarum JDM1 8187720 YP_003062542.1 CDS JDM1_0958 NC_012984.1 1025777 1025866 R hypothetical protein complement(1025777..1025866) Lactobacillus plantarum JDM1 8187721 YP_003062543.1 CDS JDM1_0959 NC_012984.1 1026425 1026625 R hypothetical protein complement(1026425..1026625) Lactobacillus plantarum JDM1 8187723 YP_003062544.1 CDS JDM1_0960 NC_012984.1 1026637 1027413 R hypothetical protein complement(1026637..1027413) Lactobacillus plantarum JDM1 8187724 YP_003062545.1 CDS JDM1_0961 NC_012984.1 1027478 1027726 R hypothetical protein complement(1027478..1027726) Lactobacillus plantarum JDM1 8187725 YP_003062546.1 CDS JDM1_0962 NC_012984.1 1027898 1028224 R transcription regulator complement(1027898..1028224) Lactobacillus plantarum JDM1 8187726 YP_003062547.1 CDS JDM1_0963 NC_012984.1 1028481 1028696 D hypothetical protein 1028481..1028696 Lactobacillus plantarum JDM1 8187727 YP_003062548.1 CDS JDM1_0964 NC_012984.1 1028779 1029513 D Phage anti-repressor protein 1028779..1029513 Lactobacillus plantarum JDM1 8187728 YP_003062549.1 CDS JDM1_0965 NC_012984.1 1029525 1029734 D hypothetical protein 1029525..1029734 Lactobacillus plantarum JDM1 8187729 YP_003062550.1 CDS JDM1_0967 NC_012984.1 1029747 1029962 D hypothetical protein 1029747..1029962 Lactobacillus plantarum JDM1 8190061 YP_003062551.1 CDS JDM1_0966 NC_012984.1 1029949 1030158 R hypothetical protein complement(1029949..1030158) Lactobacillus plantarum JDM1 8189034 YP_003062552.1 CDS JDM1_0968 NC_012984.1 1030327 1030452 R hypothetical protein complement(1030327..1030452) Lactobacillus plantarum JDM1 8190224 YP_003062553.1 CDS JDM1_0969 NC_012984.1 1030865 1031125 D hypothetical protein 1030865..1031125 Lactobacillus plantarum JDM1 8189035 YP_003062554.1 CDS JDM1_0970 NC_012984.1 1031268 1031447 D prophage Lp3 protein 4 1031268..1031447 Lactobacillus plantarum JDM1 8189036 YP_003062555.1 CDS JDM1_0971 NC_012984.1 1031481 1031735 D hypothetical protein 1031481..1031735 Lactobacillus plantarum JDM1 8189037 YP_003062556.1 CDS JDM1_0972 NC_012984.1 1031738 1031938 D hypothetical protein 1031738..1031938 Lactobacillus plantarum JDM1 8189038 YP_003062557.1 CDS JDM1_0973 NC_012984.1 1032263 1033123 D hypothetical protein 1032263..1033123 Lactobacillus plantarum JDM1 8189039 YP_003062558.1 CDS JDM1_0974 NC_012984.1 1033123 1033749 D phage protein 1033123..1033749 Lactobacillus plantarum JDM1 8189040 YP_003062559.1 CDS JDM1_0975 NC_012984.1 1033746 1034207 D single-strand binding protein 1033746..1034207 Lactobacillus plantarum JDM1 8189041 YP_003062560.1 CDS JDM1_0976 NC_012984.1 1034223 1034789 D hypothetical protein 1034223..1034789 Lactobacillus plantarum JDM1 8189042 YP_003062561.1 CDS JDM1_0977 NC_012984.1 1034795 1035487 D hypothetical protein 1034795..1035487 Lactobacillus plantarum JDM1 8189043 YP_003062562.1 CDS JDM1_0978 NC_012984.1 1035537 1036343 D phage replication initiation protein 1035537..1036343 Lactobacillus plantarum JDM1 8189044 YP_003062563.1 CDS JDM1_0979 NC_012984.1 1036343 1037128 D DNA replication protein 1036343..1037128 Lactobacillus plantarum JDM1 8189045 YP_003062564.1 CDS JDM1_0980 NC_012984.1 1037264 1037572 D hypothetical protein 1037264..1037572 Lactobacillus plantarum JDM1 8189046 YP_003062565.1 CDS JDM1_0981 NC_012984.1 1037847 1038278 D Phage transcriptional activator RinA 1037847..1038278 Lactobacillus plantarum JDM1 8189047 YP_003062566.1 CDS JDM1_0982 NC_012984.1 1038606 1038767 D hypothetical protein 1038606..1038767 Lactobacillus plantarum JDM1 8189048 YP_003062567.1 CDS JDM1_0983 NC_012984.1 1038789 1039448 D HNH nuclease 1038789..1039448 Lactobacillus plantarum JDM1 8189049 YP_003062568.1 CDS JDM1_0984 NC_012984.1 1039721 1040074 D hypothetical protein 1039721..1040074 Lactobacillus plantarum JDM1 8189050 YP_003062569.1 CDS JDM1_0985 NC_012984.1 1040061 1041977 D prophage Lp3 protein 15, terminase large subunit 1040061..1041977 Lactobacillus plantarum JDM1 8189051 YP_003062570.1 CDS JDM1_0986 NC_012984.1 1042197 1043315 D prophage Lp3 protein 17, portal protein 1042197..1043315 Lactobacillus plantarum JDM1 8189052 YP_003062571.1 CDS JDM1_0987 NC_012984.1 1043287 1043892 D protease 1043287..1043892 Lactobacillus plantarum JDM1 8189053 YP_003062572.1 CDS JDM1_0988 NC_012984.1 1043899 1045281 D capsid protein 1043899..1045281 Lactobacillus plantarum JDM1 8189054 YP_003062573.1 CDS JDM1_0989 NC_012984.1 1045372 1045650 D hypothetical protein 1045372..1045650 Lactobacillus plantarum JDM1 8189055 YP_003062574.1 CDS JDM1_0990 NC_012984.1 1045930 1045998 D hypothetical protein 1045930..1045998 Lactobacillus plantarum JDM1 8189056 YP_003062575.1 CDS JDM1_0991 NC_012984.1 1046001 1046408 D hypothetical protein 1046001..1046408 Lactobacillus plantarum JDM1 8189057 YP_003062576.1 CDS JDM1_0992 NC_012984.1 1046408 1046788 D hypothetical protein 1046408..1046788 Lactobacillus plantarum JDM1 8189058 YP_003062577.1 CDS JDM1_0993 NC_012984.1 1046803 1047444 D hypothetical protein 1046803..1047444 Lactobacillus plantarum JDM1 8189059 YP_003062578.1 CDS JDM1_0994 NC_012984.1 1047521 1047895 D hypothetical protein 1047521..1047895 Lactobacillus plantarum JDM1 8189060 YP_003062579.1 CDS JDM1_0995 NC_012984.1 1047940 1048125 D hypothetical protein 1047940..1048125 Lactobacillus plantarum JDM1 8189061 YP_003062580.1 CDS JDM1_0996 NC_012984.1 1048157 1053307 D SLT domain protein 1048157..1053307 Lactobacillus plantarum JDM1 8189062 YP_003062581.1 CDS JDM1_0997 NC_012984.1 1053384 1055156 D hypothetical protein 1053384..1055156 Lactobacillus plantarum JDM1 8189063 YP_003062582.1 CDS JDM1_0998 NC_012984.1 1055223 1057634 D hypothetical protein 1055223..1057634 Lactobacillus plantarum JDM1 8189064 YP_003062583.1 CDS JDM1_0999 NC_012984.1 1057651 1060446 D tail fiber 1057651..1060446 Lactobacillus plantarum JDM1 8189065 YP_003062584.1 CDS JDM1_1000 NC_012984.1 1060439 1060678 D hypothetical protein 1060439..1060678 Lactobacillus plantarum JDM1 8189066 YP_003062585.1 CDS JDM1_1001 NC_012984.1 1060827 1061942 D prophage Lp2 protein 53 1060827..1061942 Lactobacillus plantarum JDM1 8189067 YP_003062586.1 CDS JDM1_1002 NC_012984.1 1062209 1063366 D prophage Lp1 protein 58, lysin 1062209..1063366 Lactobacillus plantarum JDM1 8189068 YP_003062587.1 CDS JDM1_1003 NC_012984.1 1063366 1063629 D hypothetical protein 1063366..1063629 Lactobacillus plantarum JDM1 8189069 YP_003062588.1 CDS JDM1_1004 NC_012984.1 1063641 1064108 D prophage Lp2 protein 58 1063641..1064108 Lactobacillus plantarum JDM1 8189070 YP_003062589.1 CDS JDM1_1005 NC_012984.1 1064327 1064767 R universal stress protein UspA family nucleotide-binding protein complement(1064327..1064767) Lactobacillus plantarum JDM1 8189071 YP_003062590.1 CDS pts14C NC_012984.1 1064901 1066208 D cellobiose PTS, EIIC 1064901..1066208 Lactobacillus plantarum JDM1 8189072 YP_003062591.1 CDS JDM1_1007 NC_012984.1 1066201 1067124 D cell surface hydrolase () 1066201..1067124 Lactobacillus plantarum JDM1 8189073 YP_003062592.1 CDS JDM1_1008 NC_012984.1 1067618 1068058 D hypothetical protein 1067618..1068058 Lactobacillus plantarum JDM1 8189074 YP_003062593.1 CDS JDM1_1009 NC_012984.1 1068491 1069054 D hypothetical protein 1068491..1069054 Lactobacillus plantarum JDM1 8189075 YP_003062594.1 CDS JDM1_1010 NC_012984.1 1069526 1069609 R hypothetical protein complement(1069526..1069609) Lactobacillus plantarum JDM1 8189076 YP_003062595.1 CDS JDM1_1011 NC_012984.1 1069661 1070740 D hypothetical protein 1069661..1070740 Lactobacillus plantarum JDM1 8189077 YP_003062596.1 CDS JDM1_1012 NC_012984.1 1070749 1072803 D hypothetical protein 1070749..1072803 Lactobacillus plantarum JDM1 8189078 YP_003062597.1 CDS gdh NC_012984.1 1073109 1074455 R converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase complement(1073109..1074455) Lactobacillus plantarum JDM1 8189079 YP_003062598.1 CDS pbpX1 NC_012984.1 1074721 1075896 D serine-type D-Ala-D-Ala carboxypeptidase 1074721..1075896 Lactobacillus plantarum JDM1 8189080 YP_003062599.1 CDS JDM1_1015 NC_012984.1 1076086 1077204 D UDP-N-acetylglucosamine 2-epimerase 1076086..1077204 Lactobacillus plantarum JDM1 8189081 YP_003062600.1 CDS JDM1_1016 NC_012984.1 1077592 1078521 D hypothetical protein 1077592..1078521 Lactobacillus plantarum JDM1 8189082 YP_003062601.1 CDS glpF4 NC_012984.1 1078711 1079427 D glycerol uptake facilitator protein 1078711..1079427 Lactobacillus plantarum JDM1 8189083 YP_003062602.1 CDS JDM1_1018 NC_012984.1 1079679 1080872 D glycosyltransferase 1079679..1080872 Lactobacillus plantarum JDM1 8189084 YP_003062603.1 CDS JDM1_1019 NC_012984.1 1080971 1081258 D Hin-like DNA-binding protein 1080971..1081258 Lactobacillus plantarum JDM1 8189085 YP_003062604.1 CDS JDM1_1020 NC_012984.1 1081827 1082375 D transposase 1081827..1082375 Lactobacillus plantarum JDM1 8189086 YP_003062605.1 CDS JDM1_1021 NC_012984.1 1082444 1083640 R hypothetical protein complement(1082444..1083640) Lactobacillus plantarum JDM1 8189087 YP_003062606.1 CDS welF NC_012984.1 1083927 1084709 D glycosyltransferase WelF 1083927..1084709 Lactobacillus plantarum JDM1 8189088 YP_003062607.1 CDS cps2G NC_012984.1 1084775 1085740 D glycosyltransferase 1084775..1085740 Lactobacillus plantarum JDM1 8189089 YP_003062608.1 CDS JDM1_1024 NC_012984.1 1085743 1086789 D hypothetical protein 1085743..1086789 Lactobacillus plantarum JDM1 8189090 YP_003062609.1 CDS JDM1_1025 NC_012984.1 1086830 1087747 D glycosyltransferase 1086830..1087747 Lactobacillus plantarum JDM1 8189091 YP_003062610.1 CDS cps1B NC_012984.1 1087734 1088819 D polysaccharide biosynthesis protein 1087734..1088819 Lactobacillus plantarum JDM1 8189092 YP_003062611.1 CDS JDM1_1027 NC_012984.1 1088880 1090040 R hypothetical protein complement(1088880..1090040) Lactobacillus plantarum JDM1 8189093 YP_003062612.1 CDS JDM1_1028 NC_012984.1 1090270 1090932 D hypothetical protein 1090270..1090932 Lactobacillus plantarum JDM1 8189094 YP_003062613.1 CDS JDM1_1029 NC_012984.1 1090929 1091528 D hypothetical protein 1090929..1091528 Lactobacillus plantarum JDM1 8189095 YP_003062614.1 CDS pbpX2 NC_012984.1 1091531 1092667 D serine-type D-Ala-D-Ala carboxypeptidase 1091531..1092667 Lactobacillus plantarum JDM1 8189096 YP_003062615.1 CDS cps2I NC_012984.1 1092711 1094249 D transporter 1092711..1094249 Lactobacillus plantarum JDM1 8189097 YP_003062616.1 CDS rfbA NC_012984.1 1094265 1095134 D glucose-1-phosphate thymidylyltransferase 1094265..1095134 Lactobacillus plantarum JDM1 8189098 YP_003062617.1 CDS rfbC NC_012984.1 1095138 1095719 D dTDP-4-dehydrorhamnose 3,5-epimerase 1095138..1095719 Lactobacillus plantarum JDM1 8189099 YP_003062618.1 CDS rfbB NC_012984.1 1095729 1096757 D dTDP-glucose 4,6-dehydratase 1095729..1096757 Lactobacillus plantarum JDM1 8189100 YP_003062619.1 CDS rfbD NC_012984.1 1096827 1097669 D dTDP-4-dehydrorhamnose reductase 1096827..1097669 Lactobacillus plantarum JDM1 8189101 YP_003062620.1 CDS cps2I NC_012984.1 1097751 1099304 R transporter complement(1097751..1099304) Lactobacillus plantarum JDM1 8189102 YP_003062621.1 CDS JDM1_1037 NC_012984.1 1099367 1099963 R integrase/recombinase complement(1099367..1099963) Lactobacillus plantarum JDM1 8189103 YP_003062622.1 CDS JDM1_1038 NC_012984.1 1100351 1103599 D cell surface protein precursor 1100351..1103599 Lactobacillus plantarum JDM1 8189104 YP_003062623.1 CDS JDM1_1039 NC_012984.1 1103611 1104051 D transcription regulator 1103611..1104051 Lactobacillus plantarum JDM1 8189105 YP_003062624.1 CDS JDM1_1040 NC_012984.1 1104181 1105602 R transporter complement(1104181..1105602) Lactobacillus plantarum JDM1 8189106 YP_003062625.1 CDS JDM1_1041 NC_012984.1 1106040 1106717 R priming glycosyltransferase complement(1106040..1106717) Lactobacillus plantarum JDM1 8189107 YP_003062626.1 CDS JDM1_1042 NC_012984.1 1107567 1107890 D hypothetical protein 1107567..1107890 Lactobacillus plantarum JDM1 8189108 YP_003062627.1 CDS JDM1_1043 NC_012984.1 1107992 1108219 R hypothetical protein complement(1107992..1108219) Lactobacillus plantarum JDM1 8189109 YP_003062628.1 CDS JDM1_1044 NC_012984.1 1108249 1108461 R hypothetical protein complement(1108249..1108461) Lactobacillus plantarum JDM1 8189110 YP_003062629.1 CDS JDM1_1045 NC_012984.1 1108576 1108770 R hypothetical protein complement(1108576..1108770) Lactobacillus plantarum JDM1 8189111 YP_003062630.1 CDS JDM1_1046 NC_012984.1 1108806 1109354 R hypothetical protein complement(1108806..1109354) Lactobacillus plantarum JDM1 8189112 YP_003062631.1 CDS JDM1_1047 NC_012984.1 1109589 1110347 D hypothetical protein 1109589..1110347 Lactobacillus plantarum JDM1 8188232 YP_003062632.1 CDS recX NC_012984.1 1110374 1111183 D binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 1110374..1111183 Lactobacillus plantarum JDM1 8187743 YP_003062633.1 CDS JDM1_1049 NC_012984.1 1111281 1111829 D hypothetical protein 1111281..1111829 Lactobacillus plantarum JDM1 8187744 YP_003062634.1 CDS JDM1_1050 NC_012984.1 1112042 1112773 R gamma-D-glutamate-meso-diaminopimelate muropeptidase complement(1112042..1112773) Lactobacillus plantarum JDM1 8187745 YP_003062635.1 CDS JDM1_1051 NC_012984.1 1112949 1113326 D transcription regulator 1112949..1113326 Lactobacillus plantarum JDM1 8187746 YP_003062636.1 CDS JDM1_1052 NC_012984.1 1113429 1113674 D hypothetical protein 1113429..1113674 Lactobacillus plantarum JDM1 8187747 YP_003062637.1 CDS JDM1_1053 NC_012984.1 1113784 1116237 R serine-type D-Ala-D-Ala carboxypeptidase complement(1113784..1116237) Lactobacillus plantarum JDM1 8187748 YP_003062638.1 CDS hicD2 NC_012984.1 1116461 1117387 R L-2-hydroxyisocaproate dehydrogenase complement(1116461..1117387) Lactobacillus plantarum JDM1 8187749 YP_003062639.1 CDS JDM1_1055 NC_012984.1 1117551 1118744 D transport protein 1117551..1118744 Lactobacillus plantarum JDM1 8187750 YP_003062640.1 CDS tagD2 NC_012984.1 1118797 1119195 D glycerol-3-phosphate cytidylyltransferase 1118797..1119195 Lactobacillus plantarum JDM1 8187751 YP_003062641.1 CDS gntP NC_012984.1 1119360 1120715 R gluconate transport protein complement(1119360..1120715) Lactobacillus plantarum JDM1 8187752 YP_003062642.1 CDS gntK NC_012984.1 1120727 1122241 R gluconokinase complement(1120727..1122241) Lactobacillus plantarum JDM1 8187753 YP_003062643.1 CDS gnd1 NC_012984.1 1122257 1123153 R similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase complement(1122257..1123153) Lactobacillus plantarum JDM1 8187754 YP_003062644.1 CDS gshR2 NC_012984.1 1123324 1124646 R glutathione reductase complement(1123324..1124646) Lactobacillus plantarum JDM1 8187755 YP_003062645.1 CDS prfC NC_012984.1 1124944 1126521 D stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 1124944..1126521 Lactobacillus plantarum JDM1 8187756 YP_003062646.1 CDS JDM1_1062 NC_012984.1 1127147 1128124 D hypothetical protein 1127147..1128124 Lactobacillus plantarum JDM1 8187757 YP_003062647.1 CDS JDM1_1063 NC_012984.1 1128351 1129376 R hypothetical protein complement(1128351..1129376) Lactobacillus plantarum JDM1 8187758 YP_003062648.1 CDS JDM1_1064 NC_012984.1 1129517 1130398 D transcription regulator 1129517..1130398 Lactobacillus plantarum JDM1 8187759 YP_003062649.1 CDS JDM1_1065 NC_012984.1 1130627 1131472 D transport protein 1130627..1131472 Lactobacillus plantarum JDM1 8187760 YP_003062650.1 CDS JDM1_1066 NC_012984.1 1131472 1131852 D hypothetical protein 1131472..1131852 Lactobacillus plantarum JDM1 8187761 YP_003062651.1 CDS oppA NC_012984.1 1132399 1134042 D oligopeptide ABC transporter, substrate binding protein 1132399..1134042 Lactobacillus plantarum JDM1 8187762 YP_003062652.1 CDS oppB NC_012984.1 1134200 1135129 D peptide ABC transporter permease 1134200..1135129 Lactobacillus plantarum JDM1 8187763 YP_003062653.1 CDS oppC NC_012984.1 1135133 1136167 D peptide ABC transporter permease 1135133..1136167 Lactobacillus plantarum JDM1 8187764 YP_003062654.1 CDS oppD NC_012984.1 1136183 1137262 D oligopeptide ABC transporter, ATP-binding protein 1136183..1137262 Lactobacillus plantarum JDM1 8187765 YP_003062655.1 CDS oppF NC_012984.1 1137269 1138234 D oligopeptide ABC transporter, ATP-binding protein 1137269..1138234 Lactobacillus plantarum JDM1 8187766 YP_003062656.1 CDS JDM1_1072 NC_012984.1 1138775 1139164 D transcription regulator () 1138775..1139164 Lactobacillus plantarum JDM1 8187767 YP_003062657.1 CDS JDM1_1073 NC_012984.1 1139349 1139909 D integrase/recombinase 1139349..1139909 Lactobacillus plantarum JDM1 8187768 YP_003062658.1 CDS clpE NC_012984.1 1140024 1142243 R ATP-dependent Clp protease, ATP-binding subunit ClpE complement(1140024..1142243) Lactobacillus plantarum JDM1 8187769 YP_003062659.1 CDS JDM1_1075 NC_012984.1 1142726 1142923 D hypothetical protein 1142726..1142923 Lactobacillus plantarum JDM1 8187770 YP_003062660.1 CDS hpr NC_012984.1 1143073 1143339 D phosphocarrier protein HPr 1143073..1143339 Lactobacillus plantarum JDM1 8187771 YP_003062661.1 CDS ptsI NC_012984.1 1143339 1145069 D phosphoenolpyruvate-protein phosphatase 1143339..1145069 Lactobacillus plantarum JDM1 8187772 YP_003062662.1 CDS JDM1_1078 NC_012984.1 1145608 1146786 D glycosyltransferase 1145608..1146786 Lactobacillus plantarum JDM1 8187773 YP_003062663.1 CDS JDM1_1079 NC_012984.1 1146862 1147884 D glycosyltransferase 1146862..1147884 Lactobacillus plantarum JDM1 8187774 YP_003062664.1 CDS JDM1_1080 NC_012984.1 1147888 1148943 D hypothetical protein 1147888..1148943 Lactobacillus plantarum JDM1 8187775 YP_003062665.1 CDS dacA2 NC_012984.1 1149007 1150245 D serine-type D-Ala-D-Ala carboxypeptidase 1149007..1150245 Lactobacillus plantarum JDM1 8187776 YP_003062666.1 CDS araT1 NC_012984.1 1150406 1151593 R catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci; aromatic amino acid aminotransferase complement(1150406..1151593) Lactobacillus plantarum JDM1 8187777 YP_003062667.1 CDS JDM1_1083 NC_012984.1 1151785 1152021 D hypothetical protein 1151785..1152021 Lactobacillus plantarum JDM1 8187778 YP_003062668.1 CDS JDM1_1084 NC_012984.1 1152177 1154282 D alkaline phosphatase 1152177..1154282 Lactobacillus plantarum JDM1 8187779 YP_003062669.1 CDS JDM1_1085 NC_012984.1 1154298 1154585 R hypothetical protein complement(1154298..1154585) Lactobacillus plantarum JDM1 8187780 YP_003062670.1 CDS JDM1_1086 NC_012984.1 1161400 1161942 R Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis; adenine phosphoribosyltransferase complement(1161400..1161942) Lactobacillus plantarum JDM1 8187795 YP_003062671.1 CDS JDM1_1087 NC_012984.1 1161945 1163081 R hypothetical protein complement(1161945..1163081) Lactobacillus plantarum JDM1 8187796 YP_003062672.1 CDS JDM1_1088 NC_012984.1 1163213 1163734 D hypothetical protein 1163213..1163734 Lactobacillus plantarum JDM1 8187797 YP_003062673.1 CDS JDM1_1089 NC_012984.1 1163926 1164444 R acetyltransferase () complement(1163926..1164444) Lactobacillus plantarum JDM1 8187798 YP_003062674.1 CDS JDM1_1090 NC_012984.1 1164559 1165395 R hypothetical protein complement(1164559..1165395) Lactobacillus plantarum JDM1 8187799 YP_003062675.1 CDS JDM1_1091 NC_012984.1 1165750 1166622 D transcription regulator 1165750..1166622 Lactobacillus plantarum JDM1 8187800 YP_003062676.1 CDS JDM1_1092 NC_012984.1 1166740 1167627 D esterase 1166740..1167627 Lactobacillus plantarum JDM1 8187801 YP_003062677.1 CDS JDM1_1093 NC_012984.1 1167646 1168860 D transport protein 1167646..1168860 Lactobacillus plantarum JDM1 8187802 YP_003062678.1 CDS JDM1_1094 NC_012984.1 1168853 1169746 D sugar kinase and transcription regulator 1168853..1169746 Lactobacillus plantarum JDM1 8187803 YP_003062679.1 CDS mntH3 NC_012984.1 1169899 1171224 R cation transport protein complement(1169899..1171224) Lactobacillus plantarum JDM1 8187804 YP_003062680.1 CDS hemH NC_012984.1 1171196 1172170 R ferrochelatase complement(1171196..1172170) Lactobacillus plantarum JDM1 8187805 YP_003062681.1 CDS JDM1_1097 NC_012984.1 1172502 1173884 R amino acid transport protein complement(1172502..1173884) Lactobacillus plantarum JDM1 8187806 YP_003062682.1 CDS mmuM NC_012984.1 1173998 1174927 D converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines; homocysteine methyltransferase 1173998..1174927 Lactobacillus plantarum JDM1 8187807 YP_003062683.1 CDS tagE1 NC_012984.1 1175328 1176824 D poly(glycerol-phosphate) alpha-glucosyltransferase 1175328..1176824 Lactobacillus plantarum JDM1 8187808 YP_003062684.1 CDS JDM1_1100 NC_012984.1 1176900 1177619 R hypothetical protein complement(1176900..1177619) Lactobacillus plantarum JDM1 8187809 YP_003062685.1 CDS JDM1_1101 NC_012984.1 1177833 1179020 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 1177833..1179020 Lactobacillus plantarum JDM1 8187810 YP_003062686.1 CDS JDM1_1102 NC_012984.1 1179158 1180660 D multidrug transport protein 1179158..1180660 Lactobacillus plantarum JDM1 8187811 YP_003062687.1 CDS JDM1_1103 NC_012984.1 1181840 1182817 D hypothetical protein 1181840..1182817 Lactobacillus plantarum JDM1 8187812 YP_003062688.1 CDS JDM1_1104 NC_012984.1 1182919 1187844 D cell surface SD repeat protein precursor 1182919..1187844 Lactobacillus plantarum JDM1 8187813 YP_003062689.1 CDS JDM1_1105 NC_012984.1 1187971 1189605 D hypothetical protein 1187971..1189605 Lactobacillus plantarum JDM1 8187814 YP_003062690.1 CDS tagE2 NC_012984.1 1189632 1191140 D poly(glycerol-phosphate) alpha-glucosyltransferase 1189632..1191140 Lactobacillus plantarum JDM1 8187815 YP_003062691.1 CDS tagE3 NC_012984.1 1191151 1192443 D poly(glycerol-phosphate) alpha-glucosyltransferase 1191151..1192443 Lactobacillus plantarum JDM1 8187816 YP_003062692.1 CDS JDM1_1108 NC_012984.1 1192430 1192678 D poly(glycerol-phosphate) alpha-glucosyltransferase 1192430..1192678 Lactobacillus plantarum JDM1 8187817 YP_003062693.1 CDS JDM1_1109 NC_012984.1 1192708 1192905 D hypothetical protein 1192708..1192905 Lactobacillus plantarum JDM1 8187818 YP_003062694.1 CDS JDM1_1110 NC_012984.1 1193001 1193528 R methyltransferase () complement(1193001..1193528) Lactobacillus plantarum JDM1 8187819 YP_003062695.1 CDS JDM1_1111 NC_012984.1 1193597 1194280 R phosphatase () complement(1193597..1194280) Lactobacillus plantarum JDM1 8187820 YP_003062696.1 CDS leuS NC_012984.1 1194743 1197169 D leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 1194743..1197169 Lactobacillus plantarum JDM1 8187821 YP_003062697.1 CDS JDM1_1113 NC_012984.1 1197765 1199363 D hypothetical protein 1197765..1199363 Lactobacillus plantarum JDM1 8187822 YP_003062698.1 CDS rsuA NC_012984.1 1199371 1200111 D pseudouridylate synthase 1199371..1200111 Lactobacillus plantarum JDM1 8189653 YP_003062699.1 CDS JDM1_1115 NC_012984.1 1200248 1201084 R hypothetical protein complement(1200248..1201084) Lactobacillus plantarum JDM1 8189655 YP_003062700.1 CDS pepV NC_012984.1 1201211 1202614 D divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases; dipeptidase PepV 1201211..1202614 Lactobacillus plantarum JDM1 8189572 YP_003062701.1 CDS JDM1_1117 NC_012984.1 1202641 1203147 D hypothetical protein 1202641..1203147 Lactobacillus plantarum JDM1 8189573 YP_003062702.1 CDS isp2 NC_012984.1 1203441 1205198 D transposase 1203441..1205198 Lactobacillus plantarum JDM1 8189574 YP_003062703.1 CDS JDM1_1119 NC_012984.1 1205243 1206349 D sugar ABC transporter ATP-binding protein 1205243..1206349 Lactobacillus plantarum JDM1 8189575 YP_003062704.1 CDS JDM1_1120 NC_012984.1 1206399 1207289 D sugar ABC transporter permease 1206399..1207289 Lactobacillus plantarum JDM1 8189576 YP_003062705.1 CDS JDM1_1121 NC_012984.1 1207301 1208131 D sugar ABC transporter permease 1207301..1208131 Lactobacillus plantarum JDM1 8189577 YP_003062706.1 CDS JDM1_1122 NC_012984.1 1208128 1209480 D sugar ABC transporter substrate-binding protein 1208128..1209480 Lactobacillus plantarum JDM1 8189578 YP_003062707.1 CDS glpQ1 NC_012984.1 1209501 1210187 D glycerophosphodiester phosphodiesterase 1209501..1210187 Lactobacillus plantarum JDM1 8189579 YP_003062708.1 CDS dgk2 NC_012984.1 1210369 1211016 R deoxyguanosine kinase complement(1210369..1211016) Lactobacillus plantarum JDM1 8189580 YP_003062709.1 CDS mscL NC_012984.1 1211121 1211501 R forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel complement(1211121..1211501) Lactobacillus plantarum JDM1 8189581 YP_003062710.1 CDS JDM1_1126 NC_012984.1 1212005 1214953 R hypothetical protein complement(1212005..1214953) Lactobacillus plantarum JDM1 8189582 YP_003062711.1 CDS JDM1_1127 NC_012984.1 1215352 1215519 R hypothetical protein complement(1215352..1215519) Lactobacillus plantarum JDM1 8189583 YP_003062712.1 CDS JDM1_1128 NC_012984.1 1215540 1216277 R ABC transporter permease complement(1215540..1216277) Lactobacillus plantarum JDM1 8189584 YP_003062713.1 CDS JDM1_1129 NC_012984.1 1216274 1217131 R ABC transporter ATP-binding protein complement(1216274..1217131) Lactobacillus plantarum JDM1 8189585 YP_003062714.1 CDS JDM1_1130 NC_012984.1 1217282 1218268 R ABC transporter ATP-binding protein complement(1217282..1218268) Lactobacillus plantarum JDM1 8189586 YP_003062715.1 CDS JDM1_1131 NC_012984.1 1218514 1218729 R hypothetical protein complement(1218514..1218729) Lactobacillus plantarum JDM1 8189587 YP_003062716.1 CDS mrsA1 NC_012984.1 1218832 1219635 R protein-methionine-S-oxide reductase complement(1218832..1219635) Lactobacillus plantarum JDM1 8189588 YP_003062717.1 CDS JDM1_1133 NC_012984.1 1219967 1220359 D transcription regulator 1219967..1220359 Lactobacillus plantarum JDM1 8189589 YP_003062718.1 CDS JDM1_1134 NC_012984.1 1220356 1220997 D hypothetical protein 1220356..1220997 Lactobacillus plantarum JDM1 8189590 YP_003062719.1 CDS JDM1_1135 NC_012984.1 1221013 1221951 D transport protein 1221013..1221951 Lactobacillus plantarum JDM1 8189591 YP_003062720.1 CDS JDM1_1136 NC_012984.1 1222365 1223186 D HAD superfamily hydrolase 1222365..1223186 Lactobacillus plantarum JDM1 8189592 YP_003062721.1 CDS JDM1_1137 NC_012984.1 1223316 1223924 D hypothetical protein 1223316..1223924 Lactobacillus plantarum JDM1 8189593 YP_003062722.1 CDS pltA NC_012984.1 1224064 1224240 D peptide pheromone precursor 1224064..1224240 Lactobacillus plantarum JDM1 8189594 YP_003062723.1 CDS pltK NC_012984.1 1224315 1225475 D histidine protein kinase; sensor protein 1224315..1225475 Lactobacillus plantarum JDM1 8189595 YP_003062724.1 CDS pltR NC_012984.1 1225481 1226248 D response regulator 1225481..1226248 Lactobacillus plantarum JDM1 8189596 YP_003062725.1 CDS JDM1_1141 NC_012984.1 1226416 1226754 D hypothetical protein 1226416..1226754 Lactobacillus plantarum JDM1 8189597 YP_003062726.1 CDS JDM1_1142 NC_012984.1 1226914 1227336 D hypothetical protein 1226914..1227336 Lactobacillus plantarum JDM1 8189598 YP_003062727.1 CDS JDM1_1143 NC_012984.1 1227375 1227485 R membrane-bound protease, CAAX family complement(1227375..1227485) Lactobacillus plantarum JDM1 8189599 YP_003062728.1 CDS JDM1_1144 NC_012984.1 1227762 1228061 R membrane-bound protease, CAAX family complement(1227762..1228061) Lactobacillus plantarum JDM1 8189600 YP_003062729.1 CDS JDM1_1145 NC_012984.1 1228733 1229212 R transcription regulator complement(1228733..1229212) Lactobacillus plantarum JDM1 8189601 YP_003062730.1 CDS JDM1_1146 NC_012984.1 1229326 1229838 R hypothetical protein complement(1229326..1229838) Lactobacillus plantarum JDM1 8189602 YP_003062731.1 CDS JDM1_1147 NC_012984.1 1229953 1230240 D hypothetical protein 1229953..1230240 Lactobacillus plantarum JDM1 8189603 YP_003062732.1 CDS uvrA2 NC_012984.1 1230302 1232572 D excinuclease ABC subunit A 1230302..1232572 Lactobacillus plantarum JDM1 8189604 YP_003062733.1 CDS JDM1_1149 NC_012984.1 1233421 1233846 R lipoprotein precursor () complement(1233421..1233846) Lactobacillus plantarum JDM1 8189607 YP_003062734.1 CDS JDM1_1150 NC_012984.1 1234011 1235081 R hypothetical protein complement(1234011..1235081) Lactobacillus plantarum JDM1 8189608 YP_003062735.1 CDS gtcA1 NC_012984.1 1235172 1235651 D teichoic acid glycosylation protein () 1235172..1235651 Lactobacillus plantarum JDM1 8189609 YP_003062736.1 CDS JDM1_1152 NC_012984.1 1235734 1236114 R hypothetical protein complement(1235734..1236114) Lactobacillus plantarum JDM1 8189610 YP_003062737.1 CDS metH NC_012984.1 1236187 1238043 R catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein complement(1236187..1238043) Lactobacillus plantarum JDM1 8189611 YP_003062738.1 CDS metE NC_012984.1 1238057 1240363 R catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase complement(1238057..1240363) Lactobacillus plantarum JDM1 8189612 YP_003062739.1 CDS JDM1_1155 NC_012984.1 1241252 1242889 D hypothetical protein 1241252..1242889 Lactobacillus plantarum JDM1 8189613 YP_003062740.1 CDS sat NC_012984.1 1242867 1244042 D ATP sulfurylase; ATPS; converts ATP and sulfate to 5'phosphosulfate and pyrophosphate; in some organisms this enzyme is involved in the incorporation of inorganic sulfate while in others it is involved in the production of ATP in the reverse direction; the enzyme from Thermus thermophilus is dimeric and binds a zinc ion that is coordinated by cysteine and histidine residues that are not found in all related proteins but is found in some thermophilic organisms; sulfate adenylyltransferase 1242867..1244042 Lactobacillus plantarum JDM1 8189614 YP_003062741.1 CDS cysC NC_012984.1 1244045 1244668 D adenylylsulfate kinase 1244045..1244668 Lactobacillus plantarum JDM1 8189615 YP_003062742.1 CDS JDM1_1158 NC_012984.1 1244658 1245614 D exopolyphosphatase 1244658..1245614 Lactobacillus plantarum JDM1 8189616 YP_003062743.1 CDS astA NC_012984.1 1245835 1247574 D arylsulfate sulfotransferase 1245835..1247574 Lactobacillus plantarum JDM1 8189617 YP_003062744.1 CDS JDM1_1160 NC_012984.1 1248007 1249782 D sodium/sulfate symport protein () 1248007..1249782 Lactobacillus plantarum JDM1 8189618 YP_003062745.1 CDS JDM1_1161 NC_012984.1 1250057 1251448 D cation efflux protein () 1250057..1251448 Lactobacillus plantarum JDM1 8189619 YP_003062746.1 CDS JDM1_1162 NC_012984.1 1251575 1251820 D hypothetical protein 1251575..1251820 Lactobacillus plantarum JDM1 8189620 YP_003062747.1 CDS JDM1_1163 NC_012984.1 1252209 1252655 D acetyltransferase () 1252209..1252655 Lactobacillus plantarum JDM1 8189623 YP_003062748.1 CDS argS NC_012984.1 1252927 1254615 D catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1252927..1254615 Lactobacillus plantarum JDM1 8189624 YP_003062749.1 CDS JDM1_1165 NC_012984.1 1254821 1255297 R hypothetical protein complement(1254821..1255297) Lactobacillus plantarum JDM1 8189625 YP_003062750.1 CDS JDM1_1166 NC_012984.1 1255567 1257561 D ABC transporter, ATP-binding and permease protein 1255567..1257561 Lactobacillus plantarum JDM1 8189626 YP_003062751.1 CDS JDM1_1167 NC_012984.1 1258245 1258901 D hypothetical protein 1258245..1258901 Lactobacillus plantarum JDM1 8189627 YP_003062752.1 CDS JDM1_1168 NC_012984.1 1259036 1261591 D transcription regulator levR () 1259036..1261591 Lactobacillus plantarum JDM1 8189628 YP_003062753.1 CDS JDM1_1169 NC_012984.1 1261804 1262274 R hypothetical protein complement(1261804..1262274) Lactobacillus plantarum JDM1 8189629 YP_003062754.1 CDS pts15A NC_012984.1 1262558 1262896 D beta-glucosides PTS, EIIA 1262558..1262896 Lactobacillus plantarum JDM1 8189630 YP_003062755.1 CDS pts15B NC_012984.1 1262893 1263192 D beta-glucosides PTS, EIIB 1262893..1263192 Lactobacillus plantarum JDM1 8189631 YP_003062756.1 CDS pts15C NC_012984.1 1263226 1264581 D beta-glucosides PTS, EIIC 1263226..1264581 Lactobacillus plantarum JDM1 8189632 YP_003062757.1 CDS pbg3 NC_012984.1 1264584 1266056 D 6-phospho-beta-glucosidase 1264584..1266056 Lactobacillus plantarum JDM1 8189633 YP_003062758.1 CDS JDM1_1174 NC_012984.1 1266068 1267252 R transport protein complement(1266068..1267252) Lactobacillus plantarum JDM1 8189634 YP_003062759.1 CDS JDM1_1175 NC_012984.1 1267252 1267863 R hypothetical protein complement(1267252..1267863) Lactobacillus plantarum JDM1 8189635 YP_003062760.1 CDS dltC2 NC_012984.1 1268134 1268376 R D-alanyl carrier protein subunit; involved in the incorporation of D-alanine into membrane-associated D-alanyl-lipoteichoic acid; D-alanyl carrier protein is the acceptor of activated D-alanine which it donates to a membrane acceptor(D-alanyl transferase) for incorporation into membrane lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 2 complement(1268134..1268376) Lactobacillus plantarum JDM1 8189636 YP_003062761.1 CDS JDM1_1177 NC_012984.1 1268479 1269930 R aminotransferase complement(1268479..1269930) Lactobacillus plantarum JDM1 8189637 YP_003062762.1 CDS JDM1_1178 NC_012984.1 1270164 1270772 D amino acid efflux protein 1270164..1270772 Lactobacillus plantarum JDM1 8189638 YP_003062763.1 CDS arcT NC_012984.1 1270838 1271959 D associated with arginine deiminase pathway genes; probably functions in arginine catabolism; transaminase 1270838..1271959 Lactobacillus plantarum JDM1 8189639 YP_003062764.1 CDS argR1 NC_012984.1 1272137 1272598 D arginine catabolic regulator 1272137..1272598 Lactobacillus plantarum JDM1 8189640 YP_003062765.1 CDS JDM1_1181 NC_012984.1 1272676 1272798 D hypothetical protein 1272676..1272798 Lactobacillus plantarum JDM1 8189641 YP_003062766.1 CDS pbp2A NC_012984.1 1273092 1275221 D penicillin binding protein 2A 1273092..1275221 Lactobacillus plantarum JDM1 8189642 YP_003062767.1 CDS JDM1_1183 NC_012984.1 1275312 1275656 D hypothetical protein 1275312..1275656 Lactobacillus plantarum JDM1 8189643 YP_003062768.1 CDS JDM1_1184 NC_012984.1 1275726 1276946 D phosphoesterase 1275726..1276946 Lactobacillus plantarum JDM1 8189644 YP_003062769.1 CDS JDM1_1185 NC_012984.1 1276933 1279413 D hypothetical protein 1276933..1279413 Lactobacillus plantarum JDM1 8189645 YP_003062770.1 CDS JDM1_1186 NC_012984.1 1279424 1280404 D hypothetical protein 1279424..1280404 Lactobacillus plantarum JDM1 8189646 YP_003062771.1 CDS JDM1_1187 NC_012984.1 1280722 1281960 D hypothetical protein 1280722..1281960 Lactobacillus plantarum JDM1 8189647 YP_003062772.1 CDS nsr NC_012984.1 1282051 1283022 R nisin resistance protein () complement(1282051..1283022) Lactobacillus plantarum JDM1 8189648 YP_003062773.1 CDS JDM1_1189 NC_012984.1 1283208 1284155 R transcription regulator complement(1283208..1284155) Lactobacillus plantarum JDM1 8189649 YP_003062774.1 CDS JDM1_1190 NC_012984.1 1284499 1285113 D oxidoreductase () 1284499..1285113 Lactobacillus plantarum JDM1 8189650 YP_003062775.1 CDS JDM1_1191 NC_012984.1 1285116 1287554 D fumarate reductase, flavoprotein subunit precursor 1285116..1287554 Lactobacillus plantarum JDM1 8189651 YP_003062776.1 CDS JDM1_1192 NC_012984.1 1287642 1288202 D hypothetical protein 1287642..1288202 Lactobacillus plantarum JDM1 8189652 YP_003062777.1 CDS JDM1_1193 NC_012984.1 1288273 1288713 R hypothetical protein complement(1288273..1288713) Lactobacillus plantarum JDM1 8188067 YP_003062778.1 CDS JDM1_1194 NC_012984.1 1288809 1288946 D hypothetical protein 1288809..1288946 Lactobacillus plantarum JDM1 8187445 YP_003062779.1 CDS JDM1_1195 NC_012984.1 1289573 1290568 D glycosyltransferase 1289573..1290568 Lactobacillus plantarum JDM1 8187446 YP_003062780.1 CDS JDM1_1196 NC_012984.1 1290565 1292601 D hypothetical protein 1290565..1292601 Lactobacillus plantarum JDM1 8187447 YP_003062781.1 CDS JDM1_1197 NC_012984.1 1293216 1295798 R hypothetical protein complement(1293216..1295798) Lactobacillus plantarum JDM1 8187448 YP_003062782.1 CDS JDM1_1198 NC_012984.1 1296281 1297348 D Pyrimidine reductase, riboflavin biosynthesis 1296281..1297348 Lactobacillus plantarum JDM1 8187449 YP_003062783.1 CDS JDM1_1199 NC_012984.1 1297349 1297951 D riboflavin synthase, alpha subunit 1297349..1297951 Lactobacillus plantarum JDM1 8187450 YP_003062784.1 CDS ribA NC_012984.1 1297953 1299167 D GTP cyclohydrolase II 1297953..1299167 Lactobacillus plantarum JDM1 8187451 YP_003062785.1 CDS ribH NC_012984.1 1299164 1299643 D riboflavin synthase, beta chain 1299164..1299643 Lactobacillus plantarum JDM1 8187452 YP_003062786.1 CDS JDM1_1202 NC_012984.1 1299674 1300234 R hypothetical protein complement(1299674..1300234) Lactobacillus plantarum JDM1 8187453 YP_003062787.1 CDS JDM1_1203 NC_012984.1 1300411 1300974 R hypothetical protein complement(1300411..1300974) Lactobacillus plantarum JDM1 8187454 YP_003062788.1 CDS JDM1_1204 NC_012984.1 1301063 1301704 D transcription regulator 1301063..1301704 Lactobacillus plantarum JDM1 8187455 YP_003062789.1 CDS JDM1_1205 NC_012984.1 1301806 1302465 R transcription regulator complement(1301806..1302465) Lactobacillus plantarum JDM1 8187456 YP_003062790.1 CDS npr1 NC_012984.1 1302619 1303935 D NADH peroxidase 1302619..1303935 Lactobacillus plantarum JDM1 8187457 YP_003062791.1 CDS JDM1_1207 NC_012984.1 1304237 1307515 R hypothetical protein complement(1304237..1307515) Lactobacillus plantarum JDM1 8187458 YP_003062792.1 CDS JDM1_1208 NC_012984.1 1307521 1307892 R cell surface protein precursor complement(1307521..1307892) Lactobacillus plantarum JDM1 8187459 YP_003062793.1 CDS JDM1_1209 NC_012984.1 1307952 1308998 R cell surface protein precursor complement(1307952..1308998) Lactobacillus plantarum JDM1 8187460 YP_003062794.1 CDS JDM1_1210 NC_012984.1 1309008 1309688 R hypothetical protein complement(1309008..1309688) Lactobacillus plantarum JDM1 8187461 YP_003062795.1 CDS JDM1_1211 NC_012984.1 1309706 1310410 R hypothetical protein complement(1309706..1310410) Lactobacillus plantarum JDM1 8187462 YP_003062796.1 CDS prsA NC_012984.1 1310885 1311781 R cis/trans isomerase of peptidylprolyl; PPIase; membrane-bound lipoprotein; peptidylprolyl isomerase complement(1310885..1311781) Lactobacillus plantarum JDM1 8187463 YP_003062797.1 CDS JDM1_1213 NC_012984.1 1312014 1312355 R hypothetical protein complement(1312014..1312355) Lactobacillus plantarum JDM1 8187464 YP_003062798.1 CDS JDM1_1214 NC_012984.1 1312366 1312818 R cell-cycle regulation histidine triad protein complement(1312366..1312818) Lactobacillus plantarum JDM1 8187465 YP_003062799.1 CDS ecsA NC_012984.1 1313018 1313755 D ABC transporter ATP-binding protein 1313018..1313755 Lactobacillus plantarum JDM1 8187466 YP_003062800.1 CDS ecsB NC_012984.1 1313748 1314953 D ABC transporter permease 1313748..1314953 Lactobacillus plantarum JDM1 8187467 YP_003062801.1 CDS JDM1_1217 NC_012984.1 1315072 1315857 D hypothetical protein 1315072..1315857 Lactobacillus plantarum JDM1 8187468 YP_003062802.1 CDS JDM1_1218 NC_012984.1 1315943 1316587 D methyl transferase () 1315943..1316587 Lactobacillus plantarum JDM1 8187469 YP_003062803.1 CDS JDM1_1219 NC_012984.1 1316724 1317047 R hypothetical protein complement(1316724..1317047) Lactobacillus plantarum JDM1 8187470 YP_003062804.1 CDS JDM1_1220 NC_012984.1 1317216 1317857 D hypothetical protein 1317216..1317857 Lactobacillus plantarum JDM1 8187471 YP_003062805.1 CDS ftsK1 NC_012984.1 1317890 1320679 D DNA translocase FtsK 1317890..1320679 Lactobacillus plantarum JDM1 8187472 YP_003062806.1 CDS murC NC_012984.1 1320742 1322052 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 1320742..1322052 Lactobacillus plantarum JDM1 8187473 YP_003062807.1 CDS feoB NC_012984.1 1322522 1324510 R ferrous iron transport protein B complement(1322522..1324510) Lactobacillus plantarum JDM1 8187474 YP_003062808.1 CDS JDM1_1224 NC_012984.1 1324512 1324736 R hypothetical protein complement(1324512..1324736) Lactobacillus plantarum JDM1 8187475 YP_003062809.1 CDS JDM1_1225 NC_012984.1 1324992 1325789 D ABC transporter ATP-binding protein 1324992..1325789 Lactobacillus plantarum JDM1 8187476 YP_003062810.1 CDS JDM1_1226 NC_012984.1 1325802 1327103 D ABC transporter 1325802..1327103 Lactobacillus plantarum JDM1 8187477 YP_003062811.1 CDS csd1 NC_012984.1 1327087 1328325 D cysteine desulfurase 1327087..1328325 Lactobacillus plantarum JDM1 8187478 YP_003062812.1 CDS nifU NC_012984.1 1328312 1328779 D NifU-like protein 1328312..1328779 Lactobacillus plantarum JDM1 8187479 YP_003062813.1 CDS JDM1_1229 NC_012984.1 1328776 1330182 D ABC transporter 1328776..1330182 Lactobacillus plantarum JDM1 8187480 YP_003062814.1 CDS fecB NC_012984.1 1330337 1331269 D iron ABC transporter substrate-binding protein 1330337..1331269 Lactobacillus plantarum JDM1 8187481 YP_003062815.1 CDS fecE NC_012984.1 1331386 1332156 R iron ABC transporter ATP-binding protein complement(1331386..1332156) Lactobacillus plantarum JDM1 8187482 YP_003062816.1 CDS fecD NC_012984.1 1332153 1333154 R iron ABC transporter permease complement(1332153..1333154) Lactobacillus plantarum JDM1 8187483 YP_003062817.1 CDS JDM1_1233 NC_012984.1 1333158 1333613 R flavodoxin complement(1333158..1333613) Lactobacillus plantarum JDM1 8187484 YP_003062818.1 CDS moaE NC_012984.1 1334012 1334413 D molybdopterin biosynthesis protein, E chain 1334012..1334413 Lactobacillus plantarum JDM1 8187485 YP_003062819.1 CDS moaD NC_012984.1 1334416 1334661 D molybdopterin biosynthesis protein, D chain 1334416..1334661 Lactobacillus plantarum JDM1 8187486 YP_003062820.1 CDS moaA NC_012984.1 1334705 1335703 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 1334705..1335703 Lactobacillus plantarum JDM1 8187487 YP_003062821.1 CDS narK NC_012984.1 1335708 1336898 D nitrite extrusion protein 1335708..1336898 Lactobacillus plantarum JDM1 8187488 YP_003062822.1 CDS JDM1_1238 NC_012984.1 1337002 1337340 D hypothetical protein 1337002..1337340 Lactobacillus plantarum JDM1 8187489 YP_003062823.1 CDS JDM1_1239 NC_012984.1 1337370 1338248 D hypothetical protein 1337370..1338248 Lactobacillus plantarum JDM1 8187490 YP_003062824.1 CDS JDM1_1240 NC_012984.1 1338449 1339348 R hypothetical protein complement(1338449..1339348) Lactobacillus plantarum JDM1 8187491 YP_003062825.1 CDS JDM1_1241 NC_012984.1 1339363 1340343 R hypothetical protein complement(1339363..1340343) Lactobacillus plantarum JDM1 8187492 YP_003062826.1 CDS JDM1_1242 NC_012984.1 1340353 1340661 R hypothetical protein complement(1340353..1340661) Lactobacillus plantarum JDM1 8187493 YP_003062827.1 CDS rrp4 NC_012984.1 1340979 1341632 R response regulator complement(1340979..1341632) Lactobacillus plantarum JDM1 8187494 YP_003062828.1 CDS hpk4 NC_012984.1 1341665 1342696 R histidine protein kinase; sensor protein () complement(1341665..1342696) Lactobacillus plantarum JDM1 8187495 YP_003062829.1 CDS JDM1_1245 NC_012984.1 1342720 1343157 R hypothetical protein complement(1342720..1343157) Lactobacillus plantarum JDM1 8187496 YP_003062830.1 CDS JDM1_1246 NC_012984.1 1343250 1343510 R hypothetical protein complement(1343250..1343510) Lactobacillus plantarum JDM1 8187497 YP_003062831.1 CDS mobA NC_012984.1 1343500 1344069 R molybdopterin-guanine dinucleotide biosynthesis protein MobA () complement(1343500..1344069) Lactobacillus plantarum JDM1 8187498 YP_003062832.1 CDS moaC NC_012984.1 1344086 1344577 R MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC complement(1344086..1344577) Lactobacillus plantarum JDM1 8187499 YP_003062833.1 CDS mobB NC_012984.1 1344570 1345067 R molybdopterin-guanine dinucleotide biosynthesis protein MobB complement(1344570..1345067) Lactobacillus plantarum JDM1 8187500 YP_003062834.1 CDS moeA NC_012984.1 1345046 1346266 R molybdopterin biosynthesis protein MoeA complement(1345046..1346266) Lactobacillus plantarum JDM1 8187501 YP_003062835.1 CDS moaB NC_012984.1 1346281 1346748 R molybdopterin biosynthesis protein MoaB complement(1346281..1346748) Lactobacillus plantarum JDM1 8187502 YP_003062836.1 CDS moeB NC_012984.1 1346745 1347779 R molybdopterin biosynthesis protein MoeB complement(1346745..1347779) Lactobacillus plantarum JDM1 8187503 YP_003062837.1 CDS narG NC_012984.1 1347996 1351688 D nitrate reductase, alpha chain 1347996..1351688 Lactobacillus plantarum JDM1 8187504 YP_003062838.1 CDS narH NC_012984.1 1351678 1353237 D nitrate reductase, beta chain 1351678..1353237 Lactobacillus plantarum JDM1 8187505 YP_003062839.1 CDS narJ NC_012984.1 1353230 1353802 D nitrate reductase, delta chain 1353230..1353802 Lactobacillus plantarum JDM1 8187506 YP_003062840.1 CDS narI NC_012984.1 1353799 1354488 D nitrate reductase, gamma chain 1353799..1354488 Lactobacillus plantarum JDM1 8187507 YP_003062841.1 CDS JDM1_1257 NC_012984.1 1354701 1355720 D hypothetical protein 1354701..1355720 Lactobacillus plantarum JDM1 8187508 YP_003062842.1 CDS JDM1_1258 NC_012984.1 1355717 1356145 D hypothetical protein 1355717..1356145 Lactobacillus plantarum JDM1 8187509 YP_003062843.1 CDS JDM1_1259 NC_012984.1 1356337 1356906 D hypothetical protein 1356337..1356906 Lactobacillus plantarum JDM1 8187510 YP_003062844.1 CDS JDM1_1260 NC_012984.1 1356924 1357130 D transcription regulator () 1356924..1357130 Lactobacillus plantarum JDM1 8187511 YP_003062845.1 CDS JDM1_1261 NC_012984.1 1357386 1358102 D hypothetical protein 1357386..1358102 Lactobacillus plantarum JDM1 8187512 YP_003062846.1 CDS polA NC_012984.1 1358365 1361013 D DNA-directed DNA polymerase I 1358365..1361013 Lactobacillus plantarum JDM1 8187513 YP_003062847.1 CDS fpg NC_012984.1 1361025 1361849 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 1361025..1361849 Lactobacillus plantarum JDM1 8187514 YP_003062848.1 CDS coaE NC_012984.1 1361850 1362452 D dephospho-CoA kinase 1361850..1362452 Lactobacillus plantarum JDM1 8187515 YP_003062849.1 CDS nrdR NC_012984.1 1362494 1363009 D transcriptional regulator NrdR 1362494..1363009 Lactobacillus plantarum JDM1 8187516 YP_003062850.1 CDS dnaB NC_012984.1 1363031 1364434 D replication initiation and membrane attachment protein DnaB 1363031..1364434 Lactobacillus plantarum JDM1 8187517 YP_003062851.1 CDS dnaI NC_012984.1 1364438 1365373 D Primosomal protein that may act to load helicase DnaC during DNA replication; primosomal protein DnaI 1364438..1365373 Lactobacillus plantarum JDM1 8187518 YP_003062852.1 CDS thrS NC_012984.1 1365706 1367670 D catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 1365706..1367670 Lactobacillus plantarum JDM1 8187519 YP_003062853.1 CDS infC NC_012984.1 1367892 1368413 D IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 1367892..1368413 Lactobacillus plantarum JDM1 8187520 YP_003062854.1 CDS rpmI NC_012984.1 1368435 1368629 D 50S ribosomal protein L35 1368435..1368629 Lactobacillus plantarum JDM1 8187521 YP_003062855.1 CDS rplT NC_012984.1 1368666 1369022 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1368666..1369022 Lactobacillus plantarum JDM1 8187522 YP_003062856.1 CDS JDM1_1272 NC_012984.1 1369266 1369577 D hypothetical protein 1369266..1369577 Lactobacillus plantarum JDM1 8187523 YP_003062857.1 CDS cshA1 NC_012984.1 1369749 1371011 R recombination factor protein RarA complement(1369749..1371011) Lactobacillus plantarum JDM1 8189278 YP_003062858.1 CDS JDM1_1274 NC_012984.1 1371419 1372450 R oxidoreductase complement(1371419..1372450) Lactobacillus plantarum JDM1 8188233 YP_003062859.1 CDS JDM1_1275 NC_012984.1 1372615 1372962 D transcription regulator () 1372615..1372962 Lactobacillus plantarum JDM1 8187525 YP_003062860.1 CDS JDM1_1276 NC_012984.1 1373338 1373649 D aspartate racemase 1373338..1373649 Lactobacillus plantarum JDM1 8187526 YP_003062861.1 CDS JDM1_1277 NC_012984.1 1373805 1374071 D aspartate racemase 1373805..1374071 Lactobacillus plantarum JDM1 8187527 YP_003062862.1 CDS ica1 NC_012984.1 1374295 1375599 R glycosyltransferase complement(1374295..1375599) Lactobacillus plantarum JDM1 8187528 YP_003062863.1 CDS JDM1_1279 NC_012984.1 1375612 1376094 R hypothetical protein complement(1375612..1376094) Lactobacillus plantarum JDM1 8187529 YP_003062864.1 CDS JDM1_1280 NC_012984.1 1376787 1377317 D HAD superfamily hydrolase 1376787..1377317 Lactobacillus plantarum JDM1 8187530 YP_003062865.1 CDS JDM1_1281 NC_012984.1 1377314 1378450 D in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; GTP-binding protein YqeH 1377314..1378450 Lactobacillus plantarum JDM1 8187531 YP_003062866.1 CDS JDM1_1282 NC_012984.1 1378521 1378835 D hypothetical protein 1378521..1378835 Lactobacillus plantarum JDM1 8187532 YP_003062867.1 CDS nadD NC_012984.1 1378848 1379483 D transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 1378848..1379483 Lactobacillus plantarum JDM1 8187533 YP_003062868.1 CDS JDM1_1284 NC_012984.1 1379467 1380084 D hypothetical protein 1379467..1380084 Lactobacillus plantarum JDM1 8187534 YP_003062869.1 CDS JDM1_1285 NC_012984.1 1380102 1380458 D hypothetical protein 1380102..1380458 Lactobacillus plantarum JDM1 8187535 YP_003062870.1 CDS JDM1_1286 NC_012984.1 1380455 1381189 D methyltransferase () 1380455..1381189 Lactobacillus plantarum JDM1 8187536 YP_003062871.1 CDS JDM1_1287 NC_012984.1 1381204 1382355 D hypothetical protein 1381204..1382355 Lactobacillus plantarum JDM1 8187537 YP_003062872.1 CDS JDM1_1288 NC_012984.1 1382480 1383034 D hypothetical protein 1382480..1383034 Lactobacillus plantarum JDM1 8187538 YP_003062873.1 CDS rpmF NC_012984.1 1383094 1383273 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1383094..1383273 Lactobacillus plantarum JDM1 8187539 YP_003062874.1 CDS JDM1_1290 NC_012984.1 1383563 1384147 D lipoprotein precursor 1383563..1384147 Lactobacillus plantarum JDM1 8187540 YP_003062875.1 CDS JDM1_1291 NC_012984.1 1384262 1385014 R cation transport protein complement(1384262..1385014) Lactobacillus plantarum JDM1 8187541 YP_003062876.1 CDS gnd2 NC_012984.1 1385620 1387056 D catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1385620..1387056 Lactobacillus plantarum JDM1 8187542 YP_003062877.1 CDS cshA2 NC_012984.1 1387225 1388574 D recombination factor protein RarA 1387225..1388574 Lactobacillus plantarum JDM1 8187543 YP_003062878.1 CDS rrp5 NC_012984.1 1388765 1389451 D response regulator 1388765..1389451 Lactobacillus plantarum JDM1 8187544 YP_003062879.1 CDS hpk5 NC_012984.1 1389451 1391094 D histidine protein kinase; sensor protein 1389451..1391094 Lactobacillus plantarum JDM1 8187545 YP_003062880.1 CDS JDM1_1296 NC_012984.1 1391465 1392433 D prenyltransferase 1391465..1392433 Lactobacillus plantarum JDM1 8187546 YP_003062881.1 CDS sbcC NC_012984.1 1392568 1395753 R exonuclease SbcC complement(1392568..1395753) Lactobacillus plantarum JDM1 8187547 YP_003062882.1 CDS sbcD NC_012984.1 1395756 1396937 R exonuclease SbcD complement(1395756..1396937) Lactobacillus plantarum JDM1 8187548 YP_003062883.1 CDS JDM1_1299 NC_012984.1 1397301 1397879 D hypothetical protein 1397301..1397879 Lactobacillus plantarum JDM1 8187549 YP_003062884.1 CDS JDM1_1300 NC_012984.1 1398026 1398949 R hypothetical protein complement(1398026..1398949) Lactobacillus plantarum JDM1 8187550 YP_003062885.1 CDS JDM1_1301 NC_012984.1 1399013 1399285 R acylphosphatase complement(1399013..1399285) Lactobacillus plantarum JDM1 8187551 YP_003062886.1 CDS JDM1_1302 NC_012984.1 1399527 1400300 D rRNA methylase 1399527..1400300 Lactobacillus plantarum JDM1 8187552 YP_003062887.1 CDS JDM1_1303 NC_012984.1 1400401 1400910 D hypothetical protein 1400401..1400910 Lactobacillus plantarum JDM1 8187553 YP_003062888.1 CDS JDM1_1304 NC_012984.1 1400972 1401292 D transcription regulator () 1400972..1401292 Lactobacillus plantarum JDM1 8187554 YP_003062889.1 CDS pheS NC_012984.1 1401620 1402666 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1401620..1402666 Lactobacillus plantarum JDM1 8187555 YP_003062890.1 CDS pheT NC_012984.1 1402675 1405092 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1402675..1405092 Lactobacillus plantarum JDM1 8187556 YP_003062891.1 CDS JDM1_1307 NC_012984.1 1405239 1406444 D hypothetical protein 1405239..1406444 Lactobacillus plantarum JDM1 8187557 YP_003062892.1 CDS udk NC_012984.1 1406463 1407092 D functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 1406463..1407092 Lactobacillus plantarum JDM1 8187558 YP_003062893.1 CDS greA NC_012984.1 1407203 1407685 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1407203..1407685 Lactobacillus plantarum JDM1 8187559 YP_003062894.1 CDS JDM1_1310 NC_012984.1 1408328 1409050 R hypothetical protein complement(1408328..1409050) Lactobacillus plantarum JDM1 8187560 YP_003062895.1 CDS JDM1_1311 NC_012984.1 1409051 1409506 R hypothetical protein complement(1409051..1409506) Lactobacillus plantarum JDM1 8187561 YP_003062896.1 CDS JDM1_1312 NC_012984.1 1409493 1409993 D hypothetical protein 1409493..1409993 Lactobacillus plantarum JDM1 8187562 YP_003062897.1 CDS JDM1_1313 NC_012984.1 1410110 1412755 R hypothetical protein complement(1410110..1412755) Lactobacillus plantarum JDM1 8187563 YP_003062898.1 CDS pbp2B1 NC_012984.1 1412955 1414991 D penicillin binding protein 2B 1412955..1414991 Lactobacillus plantarum JDM1 8187564 YP_003062899.1 CDS fthC NC_012984.1 1415414 1415980 D 5-formyltetrahydrofolate cyclo-ligase 1415414..1415980 Lactobacillus plantarum JDM1 8187565 YP_003062900.1 CDS JDM1_1316 NC_012984.1 1415967 1416650 D hypothetical protein 1415967..1416650 Lactobacillus plantarum JDM1 8187566 YP_003062901.1 CDS JDM1_1317 NC_012984.1 1416669 1416890 D hypothetical protein 1416669..1416890 Lactobacillus plantarum JDM1 8187567 YP_003062902.1 CDS glk NC_012984.1 1416908 1417870 D glucokinase 1416908..1417870 Lactobacillus plantarum JDM1 8187568 YP_003062903.1 CDS JDM1_1319 NC_012984.1 1418156 1418776 D hypothetical protein 1418156..1418776 Lactobacillus plantarum JDM1 8187569 YP_003062904.1 CDS JDM1_1320 NC_012984.1 1419004 1419417 D hypothetical protein 1419004..1419417 Lactobacillus plantarum JDM1 8187570 YP_003062905.1 CDS JDM1_1321 NC_012984.1 1419466 1419642 R hypothetical protein complement(1419466..1419642) Lactobacillus plantarum JDM1 8187571 YP_003062906.1 CDS glpQ2 NC_012984.1 1419742 1420476 D glycerophosphodiester phosphodiesterase 1419742..1420476 Lactobacillus plantarum JDM1 8187572 YP_003062907.1 CDS miaA NC_012984.1 1420481 1421416 D tRNA isopentenyltransferase 1420481..1421416 Lactobacillus plantarum JDM1 8187573 YP_003062908.1 CDS glnR NC_012984.1 1421528 1421908 D glutamine synthetase repressor 1421528..1421908 Lactobacillus plantarum JDM1 8187574 YP_003062909.1 CDS glnA NC_012984.1 1421952 1423298 D glutamate-ammonia ligase 1421952..1423298 Lactobacillus plantarum JDM1 8187575 YP_003062910.1 CDS JDM1_1326 NC_012984.1 1423433 1424368 D hypothetical protein 1423433..1424368 Lactobacillus plantarum JDM1 8187576 YP_003062911.1 CDS JDM1_1327 NC_012984.1 1424358 1425314 D hypothetical protein 1424358..1425314 Lactobacillus plantarum JDM1 8187577 YP_003062912.1 CDS JDM1_1328 NC_012984.1 1425331 1425870 D hypothetical protein 1425331..1425870 Lactobacillus plantarum JDM1 8187578 YP_003062913.1 CDS JDM1_1329 NC_012984.1 1425916 1426254 R hypothetical protein complement(1425916..1426254) Lactobacillus plantarum JDM1 8187579 YP_003062914.1 CDS JDM1_1330 NC_012984.1 1426312 1426512 R hypothetical protein complement(1426312..1426512) Lactobacillus plantarum JDM1 8187580 YP_003062915.1 CDS JDM1_1331 NC_012984.1 1427505 1427888 D hypothetical protein 1427505..1427888 Lactobacillus plantarum JDM1 8187582 YP_003062916.1 CDS JDM1_1332 NC_012984.1 1428267 1428896 D transcription regulator 1428267..1428896 Lactobacillus plantarum JDM1 8187583 YP_003062917.1 CDS rplU NC_012984.1 1429054 1429362 D 50S ribosomal protein L21 1429054..1429362 Lactobacillus plantarum JDM1 8187584 YP_003062918.1 CDS JDM1_1334 NC_012984.1 1429384 1429719 D ribosomal protein () 1429384..1429719 Lactobacillus plantarum JDM1 8187585 YP_003062919.1 CDS rpmA NC_012984.1 1429744 1430022 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1429744..1430022 Lactobacillus plantarum JDM1 8187586 YP_003062920.1 CDS pepP NC_012984.1 1430217 1431278 D Xaa-Pro aminopeptidase () 1430217..1431278 Lactobacillus plantarum JDM1 8187587 YP_003062921.1 CDS efp NC_012984.1 1431349 1431906 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1431349..1431906 Lactobacillus plantarum JDM1 8187588 YP_003062922.1 CDS asp3 NC_012984.1 1431956 1432414 D alkaline shock protein 1431956..1432414 Lactobacillus plantarum JDM1 8187589 YP_003062923.1 CDS nusB NC_012984.1 1432411 1432830 D Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1432411..1432830 Lactobacillus plantarum JDM1 8187590 YP_003062924.1 CDS folD NC_012984.1 1432967 1433836 D bifunctional protein: methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase 1432967..1433836 Lactobacillus plantarum JDM1 8187591 YP_003062925.1 CDS xseA NC_012984.1 1433829 1435172 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1433829..1435172 Lactobacillus plantarum JDM1 8187592 YP_003062926.1 CDS xseB NC_012984.1 1435172 1435402 D catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 1435172..1435402 Lactobacillus plantarum JDM1 8187593 YP_003062927.1 CDS ispA NC_012984.1 1435395 1436285 D geranyltranstransferase 1435395..1436285 Lactobacillus plantarum JDM1 8187594 YP_003062928.1 CDS JDM1_1344 NC_012984.1 1436300 1437118 D hemolysin-like protein 1436300..1437118 Lactobacillus plantarum JDM1 8187595 YP_003062929.1 CDS argR2 NC_012984.1 1437202 1437660 D arginine catabolic regulator 1437202..1437660 Lactobacillus plantarum JDM1 8187596 YP_003062930.1 CDS recN NC_012984.1 1437764 1439458 D DNA repair protein RecN 1437764..1439458 Lactobacillus plantarum JDM1 8187597 YP_003062931.1 CDS opuA NC_012984.1 1439824 1441020 D glycine/betaine/carnitine/choline ABC transporter ATP-binding protein 1439824..1441020 Lactobacillus plantarum JDM1 8187598 YP_003062932.1 CDS opuB NC_012984.1 1441017 1441646 D glycine betaine/carnitine/choline ABC transporter, permease protein 1441017..1441646 Lactobacillus plantarum JDM1 8187599 YP_003062933.1 CDS opuC NC_012984.1 1441659 1442594 D glycine betaine/carnitine/choline ABC transporter, substrate binding protein 1441659..1442594 Lactobacillus plantarum JDM1 8187600 YP_003062934.1 CDS opuD NC_012984.1 1442594 1443247 D glycine/betaine/carnitine/choline ABC transporter ATP-binding protein 1442594..1443247 Lactobacillus plantarum JDM1 8187601 YP_003062935.1 CDS JDM1_1351 NC_012984.1 1443453 1443806 R hypothetical protein complement(1443453..1443806) Lactobacillus plantarum JDM1 8187602 YP_003062936.1 CDS gmk NC_012984.1 1443981 1444601 D Essential for recycling GMP and indirectly, cGMP; guanylate kinase 1443981..1444601 Lactobacillus plantarum JDM1 8187603 YP_003062937.1 CDS rpoZ NC_012984.1 1444598 1444810 D DNA-directed RNA polymerase, omega subunit 1444598..1444810 Lactobacillus plantarum JDM1 8187604 YP_003062938.1 CDS dfp NC_012984.1 1444974 1446200 D pantothenate metabolism flavoprotein Dfp 1444974..1446200 Lactobacillus plantarum JDM1 8189524 YP_003062939.1 CDS priA NC_012984.1 1446223 1448640 D primosomal protein N' 1446223..1448640 Lactobacillus plantarum JDM1 8189525 YP_003062940.1 CDS fmt NC_012984.1 1448664 1449617 D methionyl-tRNA formyltransferase 1448664..1449617 Lactobacillus plantarum JDM1 8189526 YP_003062941.1 CDS sunL NC_012984.1 1449614 1450957 D rRNA methylase () 1449614..1450957 Lactobacillus plantarum JDM1 8189527 YP_003062942.1 CDS pppL NC_012984.1 1450975 1451721 D serine/threonine specific protein phosphatase () 1450975..1451721 Lactobacillus plantarum JDM1 8189528 YP_003062943.1 CDS pkn1 NC_012984.1 1451718 1453388 D serine/threonine protein kinase () 1451718..1453388 Lactobacillus plantarum JDM1 8189529 YP_003062944.1 CDS JDM1_1360 NC_012984.1 1453456 1453617 D serine/threonine protein kinase () 1453456..1453617 Lactobacillus plantarum JDM1 8189530 YP_003062945.1 CDS JDM1_1361 NC_012984.1 1453702 1454598 D translation factor, GTPase () 1453702..1454598 Lactobacillus plantarum JDM1 8189531 YP_003062946.1 CDS rpe NC_012984.1 1454608 1455261 D ribulose-phosphate 3-epimerase 1454608..1455261 Lactobacillus plantarum JDM1 8189532 YP_003062947.1 CDS JDM1_1363 NC_012984.1 1455261 1455920 D hypothetical protein 1455261..1455920 Lactobacillus plantarum JDM1 8189533 YP_003062948.1 CDS rpmB NC_012984.1 1456278 1456463 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(1456278..1456463) Lactobacillus plantarum JDM1 8189534 YP_003062949.1 CDS JDM1_1365 NC_012984.1 1456699 1457061 D hypothetical protein 1456699..1457061 Lactobacillus plantarum JDM1 8189535 YP_003062950.1 CDS JDM1_1366 NC_012984.1 1457098 1458804 D hypothetical protein 1457098..1458804 Lactobacillus plantarum JDM1 8189536 YP_003062951.1 CDS recG NC_012984.1 1458947 1460986 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1458947..1460986 Lactobacillus plantarum JDM1 8189537 YP_003062952.1 CDS plsX NC_012984.1 1461028 1462074 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1461028..1462074 Lactobacillus plantarum JDM1 8189538 YP_003062953.1 CDS acpP NC_012984.1 1462113 1462358 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1462113..1462358 Lactobacillus plantarum JDM1 8189539 YP_003062954.1 CDS rnc NC_012984.1 1462775 1463470 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1462775..1463470 Lactobacillus plantarum JDM1 8189540 YP_003062955.1 CDS smc NC_012984.1 1463501 1467058 D cell division protein Smc 1463501..1467058 Lactobacillus plantarum JDM1 8189541 YP_003062956.1 CDS ftsY NC_012984.1 1467068 1468615 D signal recognition particle receptor FtsY 1467068..1468615 Lactobacillus plantarum JDM1 8189542 YP_003062957.1 CDS JDM1_1373 NC_012984.1 1468793 1469140 D DNA-binding protein 1468793..1469140 Lactobacillus plantarum JDM1 8189543 YP_003062958.1 CDS ffh NC_012984.1 1469163 1470617 D signal recognition particle protein Ffh 1469163..1470617 Lactobacillus plantarum JDM1 8189544 YP_003062959.1 CDS rpsP NC_012984.1 1470714 1470986 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1470714..1470986 Lactobacillus plantarum JDM1 8189545 YP_003062960.1 CDS JDM1_1376 NC_012984.1 1471004 1471261 D hypothetical protein 1471004..1471261 Lactobacillus plantarum JDM1 8189546 YP_003062961.1 CDS rimM NC_012984.1 1471422 1471946 D 16S rRNA processing protein 1471422..1471946 Lactobacillus plantarum JDM1 8189547 YP_003062962.1 CDS trmD NC_012984.1 1471946 1472686 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1471946..1472686 Lactobacillus plantarum JDM1 8189548 YP_003062963.1 CDS rplS NC_012984.1 1472844 1473200 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1472844..1473200 Lactobacillus plantarum JDM1 8189549 YP_003062964.1 CDS JDM1_1380 NC_012984.1 1473635 1473955 D hypothetical protein 1473635..1473955 Lactobacillus plantarum JDM1 8189550 YP_003062965.1 CDS JDM1_1381 NC_012984.1 1474583 1481242 D cell surface protein precursor 1474583..1481242 Lactobacillus plantarum JDM1 8189551 YP_003062966.1 CDS JDM1_1382 NC_012984.1 1481264 1481734 D hypothetical protein 1481264..1481734 Lactobacillus plantarum JDM1 8189552 YP_003062967.1 CDS JDM1_1383 NC_012984.1 1482232 1482996 D ABC transporter ATP-binding protein 1482232..1482996 Lactobacillus plantarum JDM1 8189553 YP_003062968.1 CDS JDM1_1384 NC_012984.1 1482986 1484584 D ABC transporter permease 1482986..1484584 Lactobacillus plantarum JDM1 8189554 YP_003062969.1 CDS JDM1_1385 NC_012984.1 1484613 1484762 R hypothetical protein complement(1484613..1484762) Lactobacillus plantarum JDM1 8189555 YP_003062970.1 CDS trpE NC_012984.1 1485057 1486214 D anthranilate synthase, component I 1485057..1486214 Lactobacillus plantarum JDM1 8189556 YP_003062971.1 CDS JDM1_1387 NC_012984.1 1486171 1486494 D anthranilate synthase, component I 1486171..1486494 Lactobacillus plantarum JDM1 8189557 YP_003062972.1 CDS trpG NC_012984.1 1486478 1487053 D anthranilate synthase, component II 1486478..1487053 Lactobacillus plantarum JDM1 8189558 YP_003062973.1 CDS trpD NC_012984.1 1487078 1488097 D anthranilate phosphoribosyltransferase 1487078..1488097 Lactobacillus plantarum JDM1 8189559 YP_003062974.1 CDS trpC NC_012984.1 1488094 1488876 D indole-3-glycerol phosphate synthase 1488094..1488876 Lactobacillus plantarum JDM1 8189560 YP_003062975.1 CDS trpF NC_012984.1 1488873 1489499 D phosphorybosylanthranilate isomerase 1488873..1489499 Lactobacillus plantarum JDM1 8189561 YP_003062976.1 CDS trpA NC_012984.1 1489501 1490700 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1489501..1490700 Lactobacillus plantarum JDM1 8189562 YP_003062977.1 CDS trpA NC_012984.1 1490690 1491487 D catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1490690..1491487 Lactobacillus plantarum JDM1 8189563 YP_003062978.1 CDS JDM1_1394 NC_012984.1 1491648 1492187 D hypothetical protein 1491648..1492187 Lactobacillus plantarum JDM1 8189564 YP_003062979.1 CDS JDM1_1395 NC_012984.1 1492188 1493138 D oxidoreductase 1492188..1493138 Lactobacillus plantarum JDM1 8189565 YP_003062980.1 CDS JDM1_1396 NC_012984.1 1493347 1493853 D acetyltransferase () 1493347..1493853 Lactobacillus plantarum JDM1 8189566 YP_003062981.1 CDS JDM1_1397 NC_012984.1 1494062 1495300 D hypothetical protein 1494062..1495300 Lactobacillus plantarum JDM1 8189567 YP_003062982.1 CDS JDM1_1398 NC_012984.1 1495313 1496446 D aminohydrolase 1495313..1496446 Lactobacillus plantarum JDM1 8189568 YP_003062983.1 CDS adh1 NC_012984.1 1496735 1497778 D alcohol dehydrogenase 1496735..1497778 Lactobacillus plantarum JDM1 8189569 YP_003062984.1 CDS JDM1_1400 NC_012984.1 1498235 1498447 D hypothetical protein 1498235..1498447 Lactobacillus plantarum JDM1 8187362 YP_003062985.1 CDS JDM1_1401 NC_012984.1 1498736 1499548 D short chain dehydrogenase 1498736..1499548 Lactobacillus plantarum JDM1 8188066 YP_003062986.1 CDS JDM1_1402 NC_012984.1 1499563 1500549 D transcription regulator 1499563..1500549 Lactobacillus plantarum JDM1 8188234 YP_003062987.1 CDS fabZ1 NC_012984.1 1501012 1501455 D (3R)-hydroxymyristoyl-ACP dehydratase 1501012..1501455 Lactobacillus plantarum JDM1 8188235 YP_003062988.1 CDS fabH2 NC_012984.1 1501530 1502516 D FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1501530..1502516 Lactobacillus plantarum JDM1 8188236 YP_003062989.1 CDS acpA2 NC_012984.1 1502573 1502821 D acyl carrier protein 1502573..1502821 Lactobacillus plantarum JDM1 8188237 YP_003062990.1 CDS fabD NC_012984.1 1502825 1503757 D ACP S-malonyltransferase 1502825..1503757 Lactobacillus plantarum JDM1 8188238 YP_003062991.1 CDS fabG1 NC_012984.1 1503744 1504472 D 3-oxoacyl-ACP reductase 1503744..1504472 Lactobacillus plantarum JDM1 8188239 YP_003062992.1 CDS fabF NC_012984.1 1504491 1505723 D 3-oxoacyl-ACP synthase 1504491..1505723 Lactobacillus plantarum JDM1 8188240 YP_003062993.1 CDS accB2 NC_012984.1 1505720 1506181 D acetyl-CoA carboxylase, biotin carboxyl carrier protein 1505720..1506181 Lactobacillus plantarum JDM1 8188241 YP_003062994.1 CDS fabZ2 NC_012984.1 1506181 1506594 D (3R)-hydroxymyristoyl-ACP dehydratase 1506181..1506594 Lactobacillus plantarum JDM1 8188242 YP_003062995.1 CDS accC2 NC_012984.1 1506609 1507997 D acetyl-CoA carboxylase, biotin carboxylase subunit 1506609..1507997 Lactobacillus plantarum JDM1 8188243 YP_003062996.1 CDS accD2 NC_012984.1 1507963 1508808 D acetyl-CoA carboxylase, carboxyl transferase subunit beta 1507963..1508808 Lactobacillus plantarum JDM1 8188244 YP_003062997.1 CDS accA2 NC_012984.1 1508801 1509571 D acetyl-CoA carboxylase, carboxyl transferase subunit alpha 1508801..1509571 Lactobacillus plantarum JDM1 8188245 YP_003062998.1 CDS fabI NC_012984.1 1509592 1510350 D Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 1509592..1510350 Lactobacillus plantarum JDM1 8188246 YP_003062999.1 CDS JDM1_1415 NC_012984.1 1510350 1510901 D phosphopantetheinyltransferase 1510350..1510901 Lactobacillus plantarum JDM1 8188247 YP_003063000.1 CDS JDM1_1417 NC_012984.1 1510911 1511144 D hypothetical protein 1510911..1511144 Lactobacillus plantarum JDM1 8188248 YP_003063001.1 CDS JDM1_1416 NC_012984.1 1511095 1511820 R hypothetical protein complement(1511095..1511820) Lactobacillus plantarum JDM1 8188250 YP_003063002.1 CDS JDM1_1418 NC_012984.1 1511947 1512834 D transcription regulator 1511947..1512834 Lactobacillus plantarum JDM1 8188249 YP_003063003.1 CDS JDM1_1419 NC_012984.1 1513040 1513540 D acyl-CoA thioester hydrolase 1513040..1513540 Lactobacillus plantarum JDM1 8188251 YP_003063004.1 CDS JDM1_1420 NC_012984.1 1513805 1514863 D GTPase 1513805..1514863 Lactobacillus plantarum JDM1 8188252 YP_003063005.1 CDS JDM1_1421 NC_012984.1 1514924 1515475 R transcription regulator () complement(1514924..1515475) Lactobacillus plantarum JDM1 8188253 YP_003063006.1 CDS JDM1_1422 NC_012984.1 1515565 1517268 D transport protein 1515565..1517268 Lactobacillus plantarum JDM1 8188254 YP_003063007.1 CDS JDM1_1423 NC_012984.1 1517426 1518295 D hypothetical protein 1517426..1518295 Lactobacillus plantarum JDM1 8188255 YP_003063008.1 CDS JDM1_1424 NC_012984.1 1518706 1519200 R hypothetical protein complement(1518706..1519200) Lactobacillus plantarum JDM1 8188256 YP_003063009.1 CDS JDM1_1425 NC_012984.1 1520757 1521095 R hypothetical protein complement(1520757..1521095) Lactobacillus plantarum JDM1 8188257 YP_003063010.1 CDS JDM1_1426 NC_012984.1 1521224 1521439 R hypothetical protein complement(1521224..1521439) Lactobacillus plantarum JDM1 8188258 YP_003063011.1 CDS cfa1 NC_012984.1 1521757 1522929 D cyclopropane-fatty-acyl-phospholipid synthase 1521757..1522929 Lactobacillus plantarum JDM1 8188259 YP_003063012.1 CDS JDM1_1428 NC_012984.1 1523177 1523782 D hypothetical protein 1523177..1523782 Lactobacillus plantarum JDM1 8188260 YP_003063013.1 CDS JDM1_1429 NC_012984.1 1524157 1524438 R hypothetical protein complement(1524157..1524438) Lactobacillus plantarum JDM1 8188261 YP_003063014.1 CDS JDM1_1430 NC_012984.1 1524829 1525077 D hypothetical protein 1524829..1525077 Lactobacillus plantarum JDM1 8188262 YP_003063015.1 CDS tspO NC_012984.1 1525221 1525706 R sensory protein complement(1525221..1525706) Lactobacillus plantarum JDM1 8188263 YP_003063016.1 CDS JDM1_1432 NC_012984.1 1525734 1526192 R hypothetical protein complement(1525734..1526192) Lactobacillus plantarum JDM1 8188264 YP_003063017.1 CDS JDM1_1433 NC_012984.1 1526350 1526715 R hypothetical protein complement(1526350..1526715) Lactobacillus plantarum JDM1 8188265 YP_003063018.1 CDS JDM1_1434 NC_012984.1 1526862 1527758 R hypothetical protein complement(1526862..1527758) Lactobacillus plantarum JDM1 8188266 YP_003063019.1 CDS JDM1_1435 NC_012984.1 1527856 1528218 D hypothetical protein 1527856..1528218 Lactobacillus plantarum JDM1 8188267 YP_003063020.1 CDS JDM1_1436 NC_012984.1 1528290 1528409 D hypothetical protein 1528290..1528409 Lactobacillus plantarum JDM1 8188268 YP_003063021.1 CDS JDM1_1437 NC_012984.1 1528425 1528691 D hypothetical protein 1528425..1528691 Lactobacillus plantarum JDM1 8188269 YP_003063022.1 CDS JDM1_1438 NC_012984.1 1528903 1529124 R hypothetical protein complement(1528903..1529124) Lactobacillus plantarum JDM1 8188270 YP_003063023.1 CDS JDM1_1439 NC_012984.1 1529202 1529468 R hypothetical protein complement(1529202..1529468) Lactobacillus plantarum JDM1 8188271 YP_003063024.1 CDS pepD4 NC_012984.1 1529652 1531091 R dipeptidase complement(1529652..1531091) Lactobacillus plantarum JDM1 8188272 YP_003063025.1 CDS xylH NC_012984.1 1531361 1531555 D 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; 4-oxalocrotonate tautomerase 1531361..1531555 Lactobacillus plantarum JDM1 8188273 YP_003063026.1 CDS lysA NC_012984.1 1531628 1532953 D diaminopimelate decarboxylase 1531628..1532953 Lactobacillus plantarum JDM1 8188274 YP_003063027.1 CDS JDM1_1443 NC_012984.1 1533359 1534276 D prenyltransferase 1533359..1534276 Lactobacillus plantarum JDM1 8188275 YP_003063028.1 CDS JDM1_1444 NC_012984.1 1534375 1535151 D potassium transport protein 1534375..1535151 Lactobacillus plantarum JDM1 8188276 YP_003063029.1 CDS JDM1_1445 NC_012984.1 1535244 1535543 D hypothetical protein 1535244..1535543 Lactobacillus plantarum JDM1 8188277 YP_003063030.1 CDS JDM1_1446 NC_012984.1 1535683 1535955 D lipoprotein precursor () 1535683..1535955 Lactobacillus plantarum JDM1 8188278 YP_003063031.1 CDS JDM1_1447 NC_012984.1 1536394 1537743 D catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 1536394..1537743 Lactobacillus plantarum JDM1 8188279 YP_003063032.1 CDS JDM1_1448 NC_012984.1 1537760 1539259 D amino acid transport protein 1537760..1539259 Lactobacillus plantarum JDM1 8188280 YP_003063033.1 CDS JDM1_1449 NC_012984.1 1539439 1540248 R HAD superfamily hydrolase complement(1539439..1540248) Lactobacillus plantarum JDM1 8188281 YP_003063034.1 CDS JDM1_1450 NC_012984.1 1540397 1541764 D rRNA methylase () 1540397..1541764 Lactobacillus plantarum JDM1 8188282 YP_003063035.1 CDS JDM1_1451 NC_012984.1 1541933 1542805 D hypothetical protein 1541933..1542805 Lactobacillus plantarum JDM1 8188283 YP_003063036.1 CDS JDM1_1452 NC_012984.1 1543299 1544645 D sugar transport protein () 1543299..1544645 Lactobacillus plantarum JDM1 8188284 YP_003063037.1 CDS map3 NC_012984.1 1544659 1546905 D maltose phosphorylase 1544659..1546905 Lactobacillus plantarum JDM1 8188285 YP_003063038.1 CDS galM2 NC_012984.1 1546930 1547943 D aldose 1-epimerase 1546930..1547943 Lactobacillus plantarum JDM1 8188286 YP_003063039.1 CDS idi1 NC_012984.1 1548100 1549146 R catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase complement(1548100..1549146) Lactobacillus plantarum JDM1 8188287 YP_003063040.1 CDS mvaK2 NC_012984.1 1549218 1550309 R phosphomevalonate kinase complement(1549218..1550309) Lactobacillus plantarum JDM1 8188288 YP_003063041.1 CDS mvaD NC_012984.1 1550360 1551337 R diphosphomevalonate decarboxylase complement(1550360..1551337) Lactobacillus plantarum JDM1 8188289 YP_003063042.1 CDS mvaK1 NC_012984.1 1551363 1552301 R mevalonate kinase complement(1551363..1552301) Lactobacillus plantarum JDM1 8188290 YP_003063043.1 CDS dinG NC_012984.1 1553146 1555950 D ATP-dependent helicase DinG 1553146..1555950 Lactobacillus plantarum JDM1 8188291 YP_003063044.1 CDS JDM1_1460 NC_012984.1 1556016 1556516 D hypothetical protein 1556016..1556516 Lactobacillus plantarum JDM1 8188292 YP_003063045.1 CDS aspB NC_012984.1 1556533 1557738 D aspartate aminotransferase 1556533..1557738 Lactobacillus plantarum JDM1 8188293 YP_003063046.1 CDS asnC NC_012984.1 1557756 1559054 D catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 1557756..1559054 Lactobacillus plantarum JDM1 8188294 YP_003063047.1 CDS dnaD NC_012984.1 1559132 1559857 D DNA replication protein DnaD 1559132..1559857 Lactobacillus plantarum JDM1 8188295 YP_003063048.1 CDS JDM1_1465 NC_012984.1 1559913 1560119 D hypothetical protein 1559913..1560119 Lactobacillus plantarum JDM1 8188296 YP_003063049.1 CDS JDM1_1464 NC_012984.1 1560079 1560147 R hypothetical protein complement(1560079..1560147) Lactobacillus plantarum JDM1 8188298 YP_003063050.1 CDS JDM1_1466 NC_012984.1 1560645 1561559 D amino acid ABC transporter ATP-binding protein 1560645..1561559 Lactobacillus plantarum JDM1 8188297 YP_003063051.1 CDS JDM1_1467 NC_012984.1 1561559 1562230 D amino acid ABC transporter permease 1561559..1562230 Lactobacillus plantarum JDM1 8188299 YP_003063052.1 CDS JDM1_1468 NC_012984.1 1562249 1563106 D amino acid ABC transporter substrate-binding protein 1562249..1563106 Lactobacillus plantarum JDM1 8188300 YP_003063053.1 CDS JDM1_1469 NC_012984.1 1563197 1563697 D hypothetical protein 1563197..1563697 Lactobacillus plantarum JDM1 8188301 YP_003063054.1 CDS JDM1_1470 NC_012984.1 1563852 1565513 R ABC transporter permease complement(1563852..1565513) Lactobacillus plantarum JDM1 8188302 YP_003063055.1 CDS JDM1_1471 NC_012984.1 1565510 1566520 R ABC transporter substrate-binding protein complement(1565510..1566520) Lactobacillus plantarum JDM1 8188303 YP_003063056.1 CDS JDM1_1472 NC_012984.1 1566533 1567486 R ABC transporter ATP-binding protein complement(1566533..1567486) Lactobacillus plantarum JDM1 8188304 YP_003063057.1 CDS JDM1_1473 NC_012984.1 1567671 1569974 R penicillin binding protein 1A complement(1567671..1569974) Lactobacillus plantarum JDM1 8188305 YP_003063058.1 CDS recU NC_012984.1 1569986 1570609 R functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC; Holliday junction-specific endonuclease complement(1569986..1570609) Lactobacillus plantarum JDM1 8188306 YP_003063059.1 CDS JDM1_1475 NC_012984.1 1570724 1571293 D hypothetical protein 1570724..1571293 Lactobacillus plantarum JDM1 8188307 YP_003063060.1 CDS JDM1_1476 NC_012984.1 1571368 1571709 D GpsB; guiding PBP1 shuttling; similar to DivIVA; cell division protein GpsB 1571368..1571709 Lactobacillus plantarum JDM1 8188308 YP_003063061.1 CDS JDM1_1477 NC_012984.1 1572269 1573414 D hypothetical protein 1572269..1573414 Lactobacillus plantarum JDM1 8188309 YP_003063062.1 CDS JDM1_1478 NC_012984.1 1573452 1573748 D transcription regulator 1573452..1573748 Lactobacillus plantarum JDM1 8188310 YP_003063063.1 CDS JDM1_1479 NC_012984.1 1574013 1575377 D transport protein 1574013..1575377 Lactobacillus plantarum JDM1 8188311 YP_003063064.1 CDS JDM1_1480 NC_012984.1 1575506 1576258 R lipase/esterase complement(1575506..1576258) Lactobacillus plantarum JDM1 8188312 YP_003063065.1 CDS JDM1_1481 NC_012984.1 1576454 1576861 D hypothetical protein 1576454..1576861 Lactobacillus plantarum JDM1 8188313 YP_003063066.1 CDS JDM1_1482 NC_012984.1 1577030 1578262 D glycosyltransferase 1577030..1578262 Lactobacillus plantarum JDM1 8188314 YP_003063067.1 CDS JDM1_1483 NC_012984.1 1578416 1578610 D bacteriocin immunity protein 1578416..1578610 Lactobacillus plantarum JDM1 8188315 YP_003063068.1 CDS JDM1_1484 NC_012984.1 1578622 1579494 D bacteriocin immunity protein () 1578622..1579494 Lactobacillus plantarum JDM1 8188316 YP_003063069.1 CDS JDM1_1485 NC_012984.1 1579880 1580080 D Acetyltransferase, GNAT family 1579880..1580080 Lactobacillus plantarum JDM1 8188317 YP_003063070.1 CDS JDM1_1486 NC_012984.1 1580228 1581571 D lysin 1580228..1581571 Lactobacillus plantarum JDM1 8188318 YP_003063071.1 CDS JDM1_1487 NC_012984.1 1581653 1582711 D bacteriocin immunity protein () 1581653..1582711 Lactobacillus plantarum JDM1 8188319 YP_003063072.1 CDS JDM1_1488 NC_012984.1 1582856 1583611 D transport protein 1582856..1583611 Lactobacillus plantarum JDM1 8188320 YP_003063073.1 CDS JDM1_1489 NC_012984.1 1583611 1584288 D ABC transporter ATP-binding protein 1583611..1584288 Lactobacillus plantarum JDM1 8188321 YP_003063074.1 CDS JDM1_1490 NC_012984.1 1584443 1585522 R hypothetical protein complement(1584443..1585522) Lactobacillus plantarum JDM1 8188322 YP_003063075.1 CDS JDM1_1491 NC_012984.1 1585779 1586573 D hydrolase () 1585779..1586573 Lactobacillus plantarum JDM1 8188323 YP_003063076.1 CDS JDM1_1493 NC_012984.1 1586731 1587837 D oxidoreductase 1586731..1587837 Lactobacillus plantarum JDM1 8188324 YP_003063077.1 CDS esbB NC_012984.1 1587834 1588220 R cell wall enzyme complement(1587834..1588220) Lactobacillus plantarum JDM1 8188326 YP_003063078.1 CDS esbA NC_012984.1 1588255 1588641 D pore-forming protein 1588255..1588641 Lactobacillus plantarum JDM1 8188325 YP_003063079.1 CDS fhs NC_012984.1 1588735 1590390 D catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase 1588735..1590390 Lactobacillus plantarum JDM1 8188327 YP_003063080.1 CDS lspA NC_012984.1 1590723 1591172 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1590723..1591172 Lactobacillus plantarum JDM1 8188328 YP_003063081.1 CDS rluD1 NC_012984.1 1591192 1592115 D pseudouridylate synthase 1591192..1592115 Lactobacillus plantarum JDM1 8188329 YP_003063082.1 CDS pyrR2 NC_012984.1 1592274 1592798 D regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 1592274..1592798 Lactobacillus plantarum JDM1 8188330 YP_003063083.1 CDS pyrAA2 NC_012984.1 1592833 1593915 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1592833..1593915 Lactobacillus plantarum JDM1 8188331 YP_003063084.1 CDS JDM1_1500 NC_012984.1 1593912 1596473 D carbamoyl phosphate synthase large subunit 1593912..1596473 Lactobacillus plantarum JDM1 8188332 YP_003063085.1 CDS JDM1_1501 NC_012984.1 1596798 1598543 D hypothetical protein 1596798..1598543 Lactobacillus plantarum JDM1 8188333 YP_003063086.1 CDS pgm5 NC_012984.1 1598695 1599294 D phosphoglycerate mutase () 1598695..1599294 Lactobacillus plantarum JDM1 8188334 YP_003063087.1 CDS JDM1_1503 NC_012984.1 1599405 1599614 R hypothetical protein complement(1599405..1599614) Lactobacillus plantarum JDM1 8188335 YP_003063088.1 CDS JDM1_1504 NC_012984.1 1599577 1599795 R hypothetical protein complement(1599577..1599795) Lactobacillus plantarum JDM1 8188336 YP_003063089.1 CDS cat NC_012984.1 1600376 1601044 R chloramphenicol O-acetyltransferase complement(1600376..1601044) Lactobacillus plantarum JDM1 8188337 YP_003063090.1 CDS JDM1_1506 NC_012984.1 1601045 1601305 R hypothetical protein complement(1601045..1601305) Lactobacillus plantarum JDM1 8188338 YP_003063091.1 CDS JDM1_1507 NC_012984.1 1601420 1602145 R hypothetical protein complement(1601420..1602145) Lactobacillus plantarum JDM1 8188339 YP_003063092.1 CDS JDM1_1508 NC_012984.1 1602348 1602842 D ADP-ribose pyrophosphatase 1602348..1602842 Lactobacillus plantarum JDM1 8188340 YP_003063093.1 CDS JDM1_1509 NC_012984.1 1603236 1604135 D ABC transporter ATP-binding protein 1603236..1604135 Lactobacillus plantarum JDM1 8188341 YP_003063094.1 CDS JDM1_1510 NC_012984.1 1604445 1604909 D ABC transporter permease 1604445..1604909 Lactobacillus plantarum JDM1 8188342 YP_003063095.1 CDS JDM1_1511 NC_012984.1 1605027 1606733 R adherence protein complement(1605027..1606733) Lactobacillus plantarum JDM1 8188343 YP_003063096.1 CDS JDM1_1512 NC_012984.1 1607216 1607638 D transcription regulator 1607216..1607638 Lactobacillus plantarum JDM1 8188344 YP_003063097.1 CDS JDM1_1513 NC_012984.1 1607723 1608592 D DegV family protein 1607723..1608592 Lactobacillus plantarum JDM1 8188345 YP_003063098.1 CDS JDM1_1514 NC_012984.1 1608860 1609027 D acetyltransferase () 1608860..1609027 Lactobacillus plantarum JDM1 8188346 YP_003063099.1 CDS JDM1_1515 NC_012984.1 1609142 1609879 D hypothetical protein 1609142..1609879 Lactobacillus plantarum JDM1 8188347 YP_003063100.1 CDS JDM1_1516 NC_012984.1 1609995 1610729 D hypothetical protein 1609995..1610729 Lactobacillus plantarum JDM1 8188348 YP_003063101.1 CDS JDM1_1517 NC_012984.1 1610821 1611111 D hypothetical protein 1610821..1611111 Lactobacillus plantarum JDM1 8188349 YP_003063102.1 CDS JDM1_1518 NC_012984.1 1611193 1611981 D hypothetical protein 1611193..1611981 Lactobacillus plantarum JDM1 8188350 YP_003063103.1 CDS JDM1_1519 NC_012984.1 1612184 1613371 R transport protein complement(1612184..1613371) Lactobacillus plantarum JDM1 8188351 YP_003063104.1 CDS JDM1_1520 NC_012984.1 1613709 1614041 D hypothetical protein 1613709..1614041 Lactobacillus plantarum JDM1 8188352 YP_003063105.1 CDS JDM1_1521 NC_012984.1 1614048 1614377 D hypothetical protein 1614048..1614377 Lactobacillus plantarum JDM1 8188353 YP_003063106.1 CDS JDM1_1522 NC_012984.1 1614597 1615343 D hypothetical protein 1614597..1615343 Lactobacillus plantarum JDM1 8188354 YP_003063107.1 CDS JDM1_1523 NC_012984.1 1615469 1616326 R hypothetical protein complement(1615469..1616326) Lactobacillus plantarum JDM1 8188355 YP_003063108.1 CDS JDM1_1524 NC_012984.1 1616550 1617890 D amino acid transport protein 1616550..1617890 Lactobacillus plantarum JDM1 8188356 YP_003063109.1 CDS JDM1_1525 NC_012984.1 1618083 1618961 D lipoprotein precursor () 1618083..1618961 Lactobacillus plantarum JDM1 8188357 YP_003063110.1 CDS JDM1_1526 NC_012984.1 1619112 1619462 R hypothetical protein complement(1619112..1619462) Lactobacillus plantarum JDM1 8188358 YP_003063111.1 CDS JDM1_1527 NC_012984.1 1619577 1621169 R L-lactate transport protein () complement(1619577..1621169) Lactobacillus plantarum JDM1 8188359 YP_003063112.1 CDS JDM1_1528 NC_012984.1 1621196 1622545 R hypothetical protein complement(1621196..1622545) Lactobacillus plantarum JDM1 8188360 YP_003063113.1 CDS ispD NC_012984.1 1623148 1623849 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1623148..1623849 Lactobacillus plantarum JDM1 8188361 YP_003063114.1 CDS JDM1_1530 NC_012984.1 1623851 1624876 D ribitol-5-phosphate 2-dehydrogenase () 1623851..1624876 Lactobacillus plantarum JDM1 8188362 YP_003063115.1 CDS JDM1_1531 NC_012984.1 1624978 1625970 D teichoic acid biosynthesis protein 1624978..1625970 Lactobacillus plantarum JDM1 8188363 YP_003063116.1 CDS tagB2 NC_012984.1 1625996 1627891 D teichoic acid biosynthesis protein 1625996..1627891 Lactobacillus plantarum JDM1 8188364 YP_003063117.1 CDS JDM1_1533 NC_012984.1 1627990 1628460 D transcription repressor 1627990..1628460 Lactobacillus plantarum JDM1 8188365 YP_003063118.1 CDS JDM1_1534 NC_012984.1 1628687 1629124 D transcription regulator 1628687..1629124 Lactobacillus plantarum JDM1 8188366 YP_003063119.1 CDS gshR3 NC_012984.1 1629190 1630539 D glutathione reductase 1629190..1630539 Lactobacillus plantarum JDM1 8188367 YP_003063120.1 CDS JDM1_1536 NC_012984.1 1630619 1631026 R hypothetical protein complement(1630619..1631026) Lactobacillus plantarum JDM1 8188368 YP_003063121.1 CDS JDM1_1537 NC_012984.1 1631232 1632536 D glycosyltransferase () 1631232..1632536 Lactobacillus plantarum JDM1 8188369 YP_003063122.1 CDS JDM1_1538 NC_012984.1 1632554 1633051 D hypothetical protein 1632554..1633051 Lactobacillus plantarum JDM1 8188370 YP_003063123.1 CDS JDM1_1539 NC_012984.1 1633041 1633472 D hypothetical protein 1633041..1633472 Lactobacillus plantarum JDM1 8188371 YP_003063124.1 CDS JDM1_1540 NC_012984.1 1633673 1633801 R hypothetical protein complement(1633673..1633801) Lactobacillus plantarum JDM1 8188372 YP_003063125.1 CDS JDM1_1541 NC_012984.1 1635715 1636569 D hypothetical protein 1635715..1636569 Lactobacillus plantarum JDM1 8188373 YP_003063126.1 CDS JDM1_1542 NC_012984.1 1636782 1636982 D hypothetical protein 1636782..1636982 Lactobacillus plantarum JDM1 8188374 YP_003063127.1 CDS msrA2 NC_012984.1 1637144 1637659 R protein-methionine-S-oxide reductase complement(1637144..1637659) Lactobacillus plantarum JDM1 8188375 YP_003063128.1 CDS msrA3 NC_012984.1 1637687 1638121 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B complement(1637687..1638121) Lactobacillus plantarum JDM1 8188376 YP_003063129.1 CDS JDM1_1545 NC_012984.1 1638249 1639178 R catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase complement(1638249..1639178) Lactobacillus plantarum JDM1 8188377 YP_003063130.1 CDS JDM1_1546 NC_012984.1 1639201 1640160 R transcription regulator complement(1639201..1640160) Lactobacillus plantarum JDM1 8188378 YP_003063131.1 CDS parC NC_012984.1 1640344 1642794 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A complement(1640344..1642794) Lactobacillus plantarum JDM1 8188379 YP_003063132.1 CDS parE NC_012984.1 1642808 1644814 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(1642808..1644814) Lactobacillus plantarum JDM1 8188380 YP_003063133.1 CDS JDM1_1549 NC_012984.1 1645299 1645925 D hypothetical protein 1645299..1645925 Lactobacillus plantarum JDM1 8188381 YP_003063134.1 CDS JDM1_1550 NC_012984.1 1646121 1646999 R hypothetical protein complement(1646121..1646999) Lactobacillus plantarum JDM1 8188382 YP_003063135.1 CDS hslU NC_012984.1 1647026 1648444 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU complement(1647026..1648444) Lactobacillus plantarum JDM1 8188383 YP_003063136.1 CDS hslV NC_012984.1 1648462 1649004 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit complement(1648462..1649004) Lactobacillus plantarum JDM1 8188384 YP_003063137.1 CDS codV NC_012984.1 1648988 1649932 R integrase/recombinase complement(1648988..1649932) Lactobacillus plantarum JDM1 8188385 YP_003063138.1 CDS gidC NC_012984.1 1650012 1651337 R TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid complement(1650012..1651337) Lactobacillus plantarum JDM1 8188386 YP_003063139.1 CDS topA NC_012984.1 1651616 1653763 R catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I complement(1651616..1653763) Lactobacillus plantarum JDM1 8188387 YP_003063140.1 CDS dprA NC_012984.1 1653852 1654718 R DNA processing protein complement(1653852..1654718) Lactobacillus plantarum JDM1 8188388 YP_003063141.1 CDS rnhB NC_012984.1 1654797 1655564 R ribonuclease HII complement(1654797..1655564) Lactobacillus plantarum JDM1 8188389 YP_003063142.1 CDS JDM1_1558 NC_012984.1 1655557 1656411 R GTPase complement(1655557..1656411) Lactobacillus plantarum JDM1 8188390 YP_003063143.1 CDS JDM1_1559 NC_012984.1 1656582 1656809 R hypothetical protein complement(1656582..1656809) Lactobacillus plantarum JDM1 8188391 YP_003063144.1 CDS JDM1_1560 NC_012984.1 1656972 1658120 R hypothetical protein complement(1656972..1658120) Lactobacillus plantarum JDM1 8188392 YP_003063145.1 CDS JDM1_1561 NC_012984.1 1658310 1659239 D transcription regulator 1658310..1659239 Lactobacillus plantarum JDM1 8188393 YP_003063146.1 CDS mrr NC_012984.1 1659489 1660424 R mrr restriction system protein complement(1659489..1660424) Lactobacillus plantarum JDM1 8188394 YP_003063147.1 CDS JDM1_1563 NC_012984.1 1660611 1661309 R hypothetical protein complement(1660611..1661309) Lactobacillus plantarum JDM1 8190321 YP_003063148.1 CDS JDM1_1564 NC_012984.1 1661306 1662364 R oxidoreductase complement(1661306..1662364) Lactobacillus plantarum JDM1 8189274 YP_003063149.1 CDS JDM1_1565 NC_012984.1 1662649 1664124 R transport protein complement(1662649..1664124) Lactobacillus plantarum JDM1 8189275 YP_003063150.1 CDS ctpA NC_012984.1 1664492 1665970 R carboxy-terminal processing proteinase complement(1664492..1665970) Lactobacillus plantarum JDM1 8189276 YP_003063151.1 CDS JDM1_1567 NC_012984.1 1666000 1666221 R hypothetical protein complement(1666000..1666221) Lactobacillus plantarum JDM1 8189277 YP_003063152.1 CDS JDM1_1568 NC_012984.1 1666233 1666877 R hypothetical protein complement(1666233..1666877) Lactobacillus plantarum JDM1 8188230 YP_003063153.1 CDS JDM1_1569 NC_012984.1 1666890 1667834 R hypothetical protein complement(1666890..1667834) Lactobacillus plantarum JDM1 8189821 YP_003063154.1 CDS JDM1_1570 NC_012984.1 1667984 1668835 R DegV family protein complement(1667984..1668835) Lactobacillus plantarum JDM1 8187730 YP_003063155.1 CDS dfrA NC_012984.1 1668942 1669433 R dihydrofolate reductase complement(1668942..1669433) Lactobacillus plantarum JDM1 8187731 YP_003063156.1 CDS thyA NC_012984.1 1669443 1670393 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(1669443..1670393) Lactobacillus plantarum JDM1 8187732 YP_003063157.1 CDS JDM1_1573 NC_012984.1 1670406 1672316 R ABC transporter ATP-binding protein complement(1670406..1672316) Lactobacillus plantarum JDM1 8187733 YP_003063158.1 CDS JDM1_1574 NC_012984.1 1672501 1672953 R hypothetical protein complement(1672501..1672953) Lactobacillus plantarum JDM1 8187734 YP_003063159.1 CDS papL NC_012984.1 1673010 1674233 R catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity; tRNA CCA-pyrophosphorylase complement(1673010..1674233) Lactobacillus plantarum JDM1 8187735 YP_003063160.1 CDS dapB NC_012984.1 1674230 1675015 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(1674230..1675015) Lactobacillus plantarum JDM1 8187736 YP_003063161.1 CDS JDM1_1577 NC_012984.1 1675301 1676098 R HAD superfamily hydrolase complement(1675301..1676098) Lactobacillus plantarum JDM1 8187737 YP_003063162.1 CDS JDM1_1578 NC_012984.1 1676209 1677477 R hypothetical protein complement(1676209..1677477) Lactobacillus plantarum JDM1 8187738 YP_003063163.1 CDS hbsU NC_012984.1 1677689 1677964 R DNA-binding protein II complement(1677689..1677964) Lactobacillus plantarum JDM1 8187739 YP_003063164.1 CDS JDM1_1580 NC_012984.1 1678010 1678117 R hypothetical protein complement(1678010..1678117) Lactobacillus plantarum JDM1 8187740 YP_003063165.1 CDS engA NC_012984.1 1678215 1679525 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(1678215..1679525) Lactobacillus plantarum JDM1 8187741 YP_003063166.1 CDS rpsA NC_012984.1 1679660 1680949 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(1679660..1680949) Lactobacillus plantarum JDM1 8187742 YP_003063167.1 CDS cmk NC_012984.1 1681039 1681725 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(1681039..1681725) Lactobacillus plantarum JDM1 8189979 YP_003063168.1 CDS JDM1_1584 NC_012984.1 1681760 1682392 R hypothetical protein complement(1681760..1682392) Lactobacillus plantarum JDM1 8189980 YP_003063169.1 CDS recQ2 NC_012984.1 1682454 1683893 R ATP-dependent DNA helicase RecQ complement(1682454..1683893) Lactobacillus plantarum JDM1 8189981 YP_003063170.1 CDS JDM1_1586 NC_012984.1 1683880 1684923 R hypothetical protein complement(1683880..1684923) Lactobacillus plantarum JDM1 8189982 YP_003063171.1 CDS JDM1_1587 NC_012984.1 1685259 1685813 R hypothetical protein complement(1685259..1685813) Lactobacillus plantarum JDM1 8189983 YP_003063172.1 CDS rluB NC_012984.1 1686113 1686829 R pseudouridylate synthase complement(1686113..1686829) Lactobacillus plantarum JDM1 8189984 YP_003063173.1 CDS JDM1_1589 NC_012984.1 1686829 1687428 R transcription regulator () complement(1686829..1687428) Lactobacillus plantarum JDM1 8189985 YP_003063174.1 CDS JDM1_1590 NC_012984.1 1687415 1688152 R hypothetical protein complement(1687415..1688152) Lactobacillus plantarum JDM1 8189986 YP_003063175.1 CDS JDM1_1591 NC_012984.1 1688148 1688531 R hypothetical protein complement(1688148..1688531) Lactobacillus plantarum JDM1 8189987 YP_003063176.1 CDS JDM1_1592 NC_012984.1 1688570 1689460 R integrase/recombinase complement(1688570..1689460) Lactobacillus plantarum JDM1 8189988 YP_003063177.1 CDS JDM1_1593 NC_012984.1 1689468 1690355 R hypothetical protein complement(1689468..1690355) Lactobacillus plantarum JDM1 8189989 YP_003063178.1 CDS JDM1_1594 NC_012984.1 1690411 1690869 R hypothetical protein complement(1690411..1690869) Lactobacillus plantarum JDM1 8189990 YP_003063179.1 CDS pyk NC_012984.1 1691852 1693612 R pyruvate kinase complement(1691852..1693612) Lactobacillus plantarum JDM1 8189991 YP_003063180.1 CDS pfkA NC_012984.1 1693698 1694660 R catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase complement(1693698..1694660) Lactobacillus plantarum JDM1 8189992 YP_003063181.1 CDS dnaE NC_012984.1 1694774 1698124 R DNA-directed DNA polymerase III, alpha chain complement(1694774..1698124) Lactobacillus plantarum JDM1 8189993 YP_003063182.1 CDS JDM1_1598 NC_012984.1 1698353 1698685 D hypothetical protein 1698353..1698685 Lactobacillus plantarum JDM1 8189994 YP_003063183.1 CDS clpB NC_012984.1 1699341 1701944 R ATP-dependent Clp protease, ATP-binding subunit ClpB complement(1699341..1701944) Lactobacillus plantarum JDM1 8189995 YP_003063184.1 CDS pepT NC_012984.1 1702061 1703299 R catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T complement(1702061..1703299) Lactobacillus plantarum JDM1 8189996 YP_003063185.1 CDS JDM1_1601 NC_012984.1 1703338 1704360 R hypothetical protein complement(1703338..1704360) Lactobacillus plantarum JDM1 8189997 YP_003063186.1 CDS JDM1_1602 NC_012984.1 1704347 1705054 R hypothetical protein complement(1704347..1705054) Lactobacillus plantarum JDM1 8189998 YP_003063187.1 CDS JDM1_1603 NC_012984.1 1705608 1706813 D hypothetical protein 1705608..1706813 Lactobacillus plantarum JDM1 8189999 YP_003063188.1 CDS drrB NC_012984.1 1706919 1707689 R ABC transporter permease complement(1706919..1707689) Lactobacillus plantarum JDM1 8190000 YP_003063189.1 CDS drrA NC_012984.1 1707704 1708645 R ABC transporter ATP-binding protein complement(1707704..1708645) Lactobacillus plantarum JDM1 8190001 YP_003063190.1 CDS JDM1_1606 NC_012984.1 1708820 1709326 D transcription regulator () 1708820..1709326 Lactobacillus plantarum JDM1 8190002 YP_003063191.1 CDS pps NC_012984.1 1709481 1711877 R catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase complement(1709481..1711877) Lactobacillus plantarum JDM1 8190003 YP_003063192.1 CDS JDM1_1608 NC_012984.1 1712307 1712675 R hypothetical protein complement(1712307..1712675) Lactobacillus plantarum JDM1 8190004 YP_003063193.1 CDS JDM1_1609 NC_012984.1 1712668 1713201 R transcription regulator complement(1712668..1713201) Lactobacillus plantarum JDM1 8190005 YP_003063194.1 CDS JDM1_1610 NC_012984.1 1713544 1714593 D lipoprotein precursor 1713544..1714593 Lactobacillus plantarum JDM1 8190006 YP_003063195.1 CDS JDM1_1611 NC_012984.1 1715014 1716120 R hypothetical protein complement(1715014..1716120) Lactobacillus plantarum JDM1 8190007 YP_003063196.1 CDS JDM1_1612 NC_012984.1 1716451 1717425 R oxidoreductase complement(1716451..1717425) Lactobacillus plantarum JDM1 8190008 YP_003063197.1 CDS mntA NC_012984.1 1717536 1719812 R cadmium-/manganese-transporting P-type ATPase complement(1717536..1719812) Lactobacillus plantarum JDM1 8190009 YP_003063198.1 CDS eno NC_012984.1 1719880 1721169 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(1719880..1721169) Lactobacillus plantarum JDM1 8190010 YP_003063199.1 CDS JDM1_1615 NC_012984.1 1721343 1722737 R transport protein complement(1721343..1722737) Lactobacillus plantarum JDM1 8190011 YP_003063200.1 CDS JDM1_1616 NC_012984.1 1722903 1723352 D transcription regulator () 1722903..1723352 Lactobacillus plantarum JDM1 8190012 YP_003063201.1 CDS dapE1 NC_012984.1 1723423 1724568 R dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase complement(1723423..1724568) Lactobacillus plantarum JDM1 8190013 YP_003063202.1 CDS JDM1_1618 NC_012984.1 1724689 1725054 R NADH oxidase () complement(1724689..1725054) Lactobacillus plantarum JDM1 8190014 YP_003063203.1 CDS JDM1_1619 NC_012984.1 1725036 1726061 R NADH oxidase () complement(1725036..1726061) Lactobacillus plantarum JDM1 8190015 YP_003063204.1 CDS JDM1_1620 NC_012984.1 1726254 1727006 D transcription regulator 1726254..1727006 Lactobacillus plantarum JDM1 8190016 YP_003063205.1 CDS mutT NC_012984.1 1727022 1727627 D 7,8-dihydro-8-oxoguanine-triphosphatase 1727022..1727627 Lactobacillus plantarum JDM1 8190017 YP_003063206.1 CDS nrpR2 NC_012984.1 1727827 1728228 R negative regulator of proteolysis complement(1727827..1728228) Lactobacillus plantarum JDM1 8190018 YP_003063207.1 CDS JDM1_1623 NC_012984.1 1728395 1728784 R hypothetical protein complement(1728395..1728784) Lactobacillus plantarum JDM1 8190019 YP_003063208.1 CDS JDM1_1624 NC_012984.1 1729014 1729646 R oxidoreductase () complement(1729014..1729646) Lactobacillus plantarum JDM1 8190020 YP_003063209.1 CDS JDM1_1625 NC_012984.1 1730082 1730645 R hypothetical protein complement(1730082..1730645) Lactobacillus plantarum JDM1 8190021 YP_003063210.1 CDS JDM1_1626 NC_012984.1 1730660 1731775 R hypothetical protein complement(1730660..1731775) Lactobacillus plantarum JDM1 8190022 YP_003063211.1 CDS gph2 NC_012984.1 1731935 1732603 R phosphoglycolate phosphatase complement(1731935..1732603) Lactobacillus plantarum JDM1 8190023 YP_003063212.1 CDS thgA2 NC_012984.1 1732596 1733204 R galactoside O-acetyltransferase complement(1732596..1733204) Lactobacillus plantarum JDM1 8190024 YP_003063213.1 CDS isp2 NC_012984.1 1733386 1735113 D transposase 1733386..1735113 Lactobacillus plantarum JDM1 8190025 YP_003063214.1 CDS JDM1_1629 NC_012984.1 1735040 1735753 R transcription regulator complement(1735040..1735753) Lactobacillus plantarum JDM1 8190027 YP_003063215.1 CDS JDM1_1631 NC_012984.1 1736085 1736939 R cell surface hydrolase () complement(1736085..1736939) Lactobacillus plantarum JDM1 8190026 YP_003063216.1 CDS JDM1_1632 NC_012984.1 1737077 1737718 R oxidoreductase () complement(1737077..1737718) Lactobacillus plantarum JDM1 8190028 YP_003063217.1 CDS JDM1_1633 NC_012984.1 1737721 1738155 R hypothetical protein complement(1737721..1738155) Lactobacillus plantarum JDM1 8190029 YP_003063218.1 CDS JDM1_1634 NC_012984.1 1738371 1739261 D transcription regulator 1738371..1739261 Lactobacillus plantarum JDM1 8190030 YP_003063219.1 CDS JDM1_1635 NC_012984.1 1739425 1740369 D oxidoreductase 1739425..1740369 Lactobacillus plantarum JDM1 8190031 YP_003063220.1 CDS JDM1_1636 NC_012984.1 1740464 1740550 R hypothetical protein complement(1740464..1740550) Lactobacillus plantarum JDM1 8190032 YP_003063221.1 CDS nox4 NC_012984.1 1740892 1742298 R NADH oxidase complement(1740892..1742298) Lactobacillus plantarum JDM1 8190033 YP_003063222.1 CDS rrp6 NC_012984.1 1742453 1743058 R response regulator complement(1742453..1743058) Lactobacillus plantarum JDM1 8190034 YP_003063223.1 CDS hpk6 NC_012984.1 1743068 1744171 R histidine protein kinase; sensor protein complement(1743068..1744171) Lactobacillus plantarum JDM1 8190035 YP_003063224.1 CDS JDM1_1640 NC_012984.1 1744155 1744925 R ABC transporter permease complement(1744155..1744925) Lactobacillus plantarum JDM1 8190036 YP_003063225.1 CDS JDM1_1641 NC_012984.1 1744922 1745809 R ABC transporter ATP-binding protein complement(1744922..1745809) Lactobacillus plantarum JDM1 8190037 YP_003063226.1 CDS JDM1_1642 NC_012984.1 1746013 1746324 R hypothetical protein complement(1746013..1746324) Lactobacillus plantarum JDM1 8190038 YP_003063227.1 CDS JDM1_1643 NC_012984.1 1746456 1746923 D acetyltransferase () 1746456..1746923 Lactobacillus plantarum JDM1 8190039 YP_003063228.1 CDS JDM1_1644 NC_012984.1 1746951 1747418 D transcription regulator 1746951..1747418 Lactobacillus plantarum JDM1 8190040 YP_003063229.1 CDS JDM1_1645 NC_012984.1 1747415 1748083 D hypothetical protein 1747415..1748083 Lactobacillus plantarum JDM1 8190041 YP_003063230.1 CDS JDM1_1646 NC_012984.1 1748627 1749526 D ABC transporter ATP-binding protein 1748627..1749526 Lactobacillus plantarum JDM1 8190042 YP_003063231.1 CDS JDM1_1647 NC_012984.1 1749540 1750292 D ABC transporter permease 1749540..1750292 Lactobacillus plantarum JDM1 8190043 YP_003063232.1 CDS JDM1_1648 NC_012984.1 1750365 1751423 R ABC transporter permease complement(1750365..1751423) Lactobacillus plantarum JDM1 8190044 YP_003063233.1 CDS JDM1_1649 NC_012984.1 1751420 1752490 R ABC transporter permease complement(1751420..1752490) Lactobacillus plantarum JDM1 8190045 YP_003063234.1 CDS JDM1_1650 NC_012984.1 1752492 1753385 R ABC transporter ATP-binding protein complement(1752492..1753385) Lactobacillus plantarum JDM1 8190046 YP_003063235.1 CDS JDM1_1651 NC_012984.1 1753369 1753758 R transcription regulator complement(1753369..1753758) Lactobacillus plantarum JDM1 8190047 YP_003063236.1 CDS JDM1_1652 NC_012984.1 1753820 1754053 D hypothetical protein 1753820..1754053 Lactobacillus plantarum JDM1 8190048 YP_003063237.1 CDS rpoD NC_012984.1 1754516 1755622 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium; RNA polymerase sigma factor RpoD complement(1754516..1755622) Lactobacillus plantarum JDM1 8190049 YP_003063238.1 CDS dnaG NC_012984.1 1755704 1757584 R DNA primase DnaG complement(1755704..1757584) Lactobacillus plantarum JDM1 8190050 YP_003063239.1 CDS glyS NC_012984.1 1757841 1759925 R glycine-tRNA ligase, beta chain complement(1757841..1759925) Lactobacillus plantarum JDM1 8190051 YP_003063240.1 CDS glyQ NC_012984.1 1759925 1760824 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(1759925..1760824) Lactobacillus plantarum JDM1 8190052 YP_003063241.1 CDS recO NC_012984.1 1761147 1761923 R DNA repair protein RecO complement(1761147..1761923) Lactobacillus plantarum JDM1 8190053 YP_003063242.1 CDS era NC_012984.1 1761954 1762862 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(1761954..1762862) Lactobacillus plantarum JDM1 8190054 YP_003063243.1 CDS JDM1_1659 NC_012984.1 1762903 1763319 R diacylglycerol kinase complement(1762903..1763319) Lactobacillus plantarum JDM1 8190055 YP_003063244.1 CDS JDM1_1660 NC_012984.1 1763303 1763782 R hypothetical protein complement(1763303..1763782) Lactobacillus plantarum JDM1 8190056 YP_003063245.1 CDS phoH NC_012984.1 1763792 1764769 R phosphate starvation-inducible protein complement(1763792..1764769) Lactobacillus plantarum JDM1 8190057 YP_003063246.1 CDS JDM1_1662 NC_012984.1 1765083 1765526 R hypothetical protein complement(1765083..1765526) Lactobacillus plantarum JDM1 8190058 YP_003063247.1 CDS rpsU NC_012984.1 1765568 1765756 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(1765568..1765756) Lactobacillus plantarum JDM1 8190059 YP_003063248.1 CDS JDM1_1664 NC_012984.1 1765989 1766807 D hypothetical protein 1765989..1766807 Lactobacillus plantarum JDM1 8190060 YP_003063249.1 CDS JDM1_1665 NC_012984.1 1766950 1767675 R short-chain dehydrogenase/oxidoreductase complement(1766950..1767675) Lactobacillus plantarum JDM1 8190062 YP_003063250.1 CDS nfo NC_012984.1 1767733 1768629 R Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV complement(1767733..1768629) Lactobacillus plantarum JDM1 8190063 YP_003063251.1 CDS tagB3 NC_012984.1 1768742 1769902 R teichoic acid biosynthesis protein complement(1768742..1769902) Lactobacillus plantarum JDM1 8190064 YP_003063252.1 CDS JDM1_1668 NC_012984.1 1770276 1771151 R hypothetical protein complement(1770276..1771151) Lactobacillus plantarum JDM1 8190065 YP_003063253.1 CDS msrA4 NC_012984.1 1771354 1771884 R protein-methionine-S-oxide reductase complement(1771354..1771884) Lactobacillus plantarum JDM1 8190066 YP_003063254.1 CDS aspS NC_012984.1 1771965 1773761 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(1771965..1773761) Lactobacillus plantarum JDM1 8190067 YP_003063255.1 CDS hisS NC_012984.1 1773803 1775083 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(1773803..1775083) Lactobacillus plantarum JDM1 8190068 YP_003063256.1 CDS lytH NC_012984.1 1775474 1776322 D N-acetylmuramoyl-L-alanine amidase 1775474..1776322 Lactobacillus plantarum JDM1 8190069 YP_003063257.1 CDS JDM1_1673 NC_012984.1 1776591 1777433 D hypothetical protein 1776591..1777433 Lactobacillus plantarum JDM1 8190070 YP_003063258.1 CDS JDM1_1674 NC_012984.1 1777541 1778164 R HAD superfamily hydrolase complement(1777541..1778164) Lactobacillus plantarum JDM1 8190071 YP_003063259.1 CDS JDM1_1675 NC_012984.1 1778237 1778683 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(1778237..1778683) Lactobacillus plantarum JDM1 8190072 YP_003063260.1 CDS relA NC_012984.1 1778693 1780960 R GTP pyrophosphokinase complement(1778693..1780960) Lactobacillus plantarum JDM1 8190073 YP_003063261.1 CDS JDM1_1677 NC_012984.1 1781041 1781376 R hypothetical protein complement(1781041..1781376) Lactobacillus plantarum JDM1 8190074 YP_003063262.1 CDS JDM1_1678 NC_012984.1 1781447 1782199 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(1781447..1782199) Lactobacillus plantarum JDM1 8190075 YP_003063263.1 CDS prmA NC_012984.1 1782212 1783162 R methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase complement(1782212..1783162) Lactobacillus plantarum JDM1 8190076 YP_003063264.1 CDS JDM1_1680 NC_012984.1 1783271 1783900 R N-methylpurine-DNA glycosylase () complement(1783271..1783900) Lactobacillus plantarum JDM1 8190077 YP_003063265.1 CDS JDM1_1681 NC_012984.1 1783967 1784257 R hypothetical protein complement(1783967..1784257) Lactobacillus plantarum JDM1 8190078 YP_003063266.1 CDS JDM1_1682 NC_012984.1 1784512 1784802 D hypothetical protein 1784512..1784802 Lactobacillus plantarum JDM1 8190079 YP_003063267.1 CDS lepA1 NC_012984.1 1784908 1786743 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(1784908..1786743) Lactobacillus plantarum JDM1 8190080 YP_003063268.1 CDS dltD NC_012984.1 1786907 1788184 R D-alanyl transfer protein DltD complement(1786907..1788184) Lactobacillus plantarum JDM1 8190081 YP_003063269.1 CDS dltC1 NC_012984.1 1788181 1788423 R D-alanyl carrier protein subunit; involved in the incorporation of D-alanine into membrane-associated D-alanyl-lipoteichoic acid; D-alanyl carrier protein is the acceptor of activated D-alanine which it donates to a membrane acceptor(D-alanyl transferase) for incorporation into membrane lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 2 complement(1788181..1788423) Lactobacillus plantarum JDM1 8190082 YP_003063270.1 CDS dltB NC_012984.1 1788447 1789661 R D-alanyl transfer protein DltB complement(1788447..1789661) Lactobacillus plantarum JDM1 8190083 YP_003063271.1 CDS dltA NC_012984.1 1789658 1791184 R transfers D-alanine to the D-alanyl carrier protein during the incorporation of D-alanine into lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 1 complement(1789658..1791184) Lactobacillus plantarum JDM1 8190084 YP_003063272.1 CDS dltX NC_012984.1 1791227 1791376 R D-Ala-teichoic acid biosynthesis protein () complement(1791227..1791376) Lactobacillus plantarum JDM1 8190085 YP_003063273.1 CDS pbpX2 NC_012984.1 1791408 1792601 R serine-type D-Ala-D-Ala carboxypeptidase complement(1791408..1792601) Lactobacillus plantarum JDM1 8190086 YP_003063274.1 CDS dnaJ NC_012984.1 1793017 1794159 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ complement(1793017..1794159) Lactobacillus plantarum JDM1 8190087 YP_003063275.1 CDS dnaK NC_012984.1 1794261 1796129 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(1794261..1796129) Lactobacillus plantarum JDM1 8190088 YP_003063276.1 CDS JDM1_1692 NC_012984.1 1796173 1796772 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(1796173..1796772) Lactobacillus plantarum JDM1 8190089 YP_003063277.1 CDS hrcA NC_012984.1 1796793 1797836 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(1796793..1797836) Lactobacillus plantarum JDM1 8190090 YP_003063278.1 CDS aldB NC_012984.1 1798227 1798937 R alpha-acetolactate decarboxylase complement(1798227..1798937) Lactobacillus plantarum JDM1 8190091 YP_003063279.1 CDS ribC2 NC_012984.1 1798938 1799939 R bifunctional protein: riboflavin kinase; FMN adenylyltransferase complement(1798938..1799939) Lactobacillus plantarum JDM1 8190092 YP_003063280.1 CDS truB NC_012984.1 1799952 1800875 R catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B complement(1799952..1800875) Lactobacillus plantarum JDM1 8190093 YP_003063281.1 CDS aroI NC_012984.1 1801347 1801868 R shikimate kinase complement(1801347..1801868) Lactobacillus plantarum JDM1 8190094 YP_003063282.1 CDS tyrA NC_012984.1 1801871 1802968 R catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase complement(1801871..1802968) Lactobacillus plantarum JDM1 8190095 YP_003063283.1 CDS aroA NC_012984.1 1802971 1804269 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(1802971..1804269) Lactobacillus plantarum JDM1 8190096 YP_003063284.1 CDS JDM1_1700 NC_012984.1 1804283 1804810 R hypothetical protein complement(1804283..1804810) Lactobacillus plantarum JDM1 8190097 YP_003063285.1 CDS aroF NC_012984.1 1804819 1805988 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(1804819..1805988) Lactobacillus plantarum JDM1 8190098 YP_003063286.1 CDS JDM1_1702 NC_012984.1 1805981 1807435 R transport protein complement(1805981..1807435) Lactobacillus plantarum JDM1 8190099 YP_003063287.1 CDS rbfA NC_012984.1 1808084 1808437 R associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A complement(1808084..1808437) Lactobacillus plantarum JDM1 8190100 YP_003063288.1 CDS infB NC_012984.1 1808460 1811036 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(1808460..1811036) Lactobacillus plantarum JDM1 8190101 YP_003063289.1 CDS JDM1_1705 NC_012984.1 1811051 1811356 R ribosomal protein HS6-type (S12/L30/L7a) complement(1811051..1811356) Lactobacillus plantarum JDM1 8190102 YP_003063290.1 CDS JDM1_1706 NC_012984.1 1811346 1811645 R hypothetical protein complement(1811346..1811645) Lactobacillus plantarum JDM1 8190103 YP_003063291.1 CDS nusA NC_012984.1 1811690 1812907 R modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA complement(1811690..1812907) Lactobacillus plantarum JDM1 8190104 YP_003063292.1 CDS JDM1_1708 NC_012984.1 1812928 1813404 R in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein complement(1812928..1813404) Lactobacillus plantarum JDM1 8190105 YP_003063293.1 CDS polC NC_012984.1 1813700 1818013 R catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity; DNA polymerase III PolC complement(1813700..1818013) Lactobacillus plantarum JDM1 8190106 YP_003063294.1 CDS proS NC_012984.1 1818507 1820216 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(1818507..1820216) Lactobacillus plantarum JDM1 8190107 YP_003063295.1 CDS JDM1_1711 NC_012984.1 1820256 1821533 R zinc-dependent protease, membrane associated () complement(1820256..1821533) Lactobacillus plantarum JDM1 8190108 YP_003063296.1 CDS cdsA NC_012984.1 1821571 1822356 R phosphatidate cytidylyltransferase complement(1821571..1822356) Lactobacillus plantarum JDM1 8190109 YP_003063297.1 CDS uppS NC_012984.1 1822372 1823151 R catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; UDP pyrophosphate synthase complement(1822372..1823151) Lactobacillus plantarum JDM1 8190110 YP_003063298.1 CDS frr NC_012984.1 1823271 1823834 R Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor complement(1823271..1823834) Lactobacillus plantarum JDM1 8190111 YP_003063299.1 CDS pyrH NC_012984.1 1823836 1824558 R Catalyzes the phosphorylation of UMP to UDP; uridylate kinase complement(1823836..1824558) Lactobacillus plantarum JDM1 8190112 YP_003063300.1 CDS tsf NC_012984.1 1824758 1825636 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(1824758..1825636) Lactobacillus plantarum JDM1 8190113 YP_003063301.1 CDS rpsB NC_012984.1 1825739 1826542 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(1825739..1826542) Lactobacillus plantarum JDM1 8190114 YP_003063302.1 CDS JDM1_1718 NC_012984.1 1826767 1827489 D HAD superfamily hydrolase 1826767..1827489 Lactobacillus plantarum JDM1 8190115 YP_003063303.1 CDS ldhD NC_012984.1 1827778 1828776 R D-lactate dehydrogenase complement(1827778..1828776) Lactobacillus plantarum JDM1 8190116 YP_003063304.1 CDS JDM1_1720 NC_012984.1 1828861 1829082 R endonuclease complement(1828861..1829082) Lactobacillus plantarum JDM1 8190117 YP_003063305.1 CDS JDM1_1721 NC_012984.1 1829149 1829907 R methyltransferase () complement(1829149..1829907) Lactobacillus plantarum JDM1 8190118 YP_003063306.1 CDS plsC NC_012984.1 1830016 1830654 D 1-acylglycerol-3-phosphate O-acyltransferase 1830016..1830654 Lactobacillus plantarum JDM1 8190119 YP_003063307.1 CDS JDM1_1723 NC_012984.1 1830712 1830948 R hypothetical protein complement(1830712..1830948) Lactobacillus plantarum JDM1 8190120 YP_003063308.1 CDS JDM1_1724 NC_012984.1 1831046 1831285 R hypothetical protein complement(1831046..1831285) Lactobacillus plantarum JDM1 8190121 YP_003063309.1 CDS lexA NC_012984.1 1831437 1832069 D Represses a number of genes involved in the response to DNA damage; LexA repressor 1831437..1832069 Lactobacillus plantarum JDM1 8190122 YP_003063310.1 CDS JDM1_1726 NC_012984.1 1832625 1833254 D hypothetical protein 1832625..1833254 Lactobacillus plantarum JDM1 8190123 YP_003063311.1 CDS mvaS NC_012984.1 1833303 1834472 R hydroxymethylglutaryl-CoA synthase complement(1833303..1834472) Lactobacillus plantarum JDM1 8190124 YP_003063312.1 CDS JDM1_1728 NC_012984.1 1834508 1834900 R hypothetical protein complement(1834508..1834900) Lactobacillus plantarum JDM1 8190125 YP_003063313.1 CDS JDM1_1729 NC_012984.1 1835064 1835456 D hypothetical protein 1835064..1835456 Lactobacillus plantarum JDM1 8190126 YP_003063314.1 CDS JDM1_1730 NC_012984.1 1835902 1836843 D glycosyltransferase 1835902..1836843 Lactobacillus plantarum JDM1 8190127 YP_003063315.1 CDS JDM1_1731 NC_012984.1 1837367 1837552 D hypothetical protein 1837367..1837552 Lactobacillus plantarum JDM1 8190128 YP_003063316.1 CDS JDM1_1732 NC_012984.1 1837852 1838061 D hypothetical protein 1837852..1838061 Lactobacillus plantarum JDM1 8190129 YP_003063317.1 CDS JDM1_1733 NC_012984.1 1838281 1839762 D hypothetical protein 1838281..1839762 Lactobacillus plantarum JDM1 8190130 YP_003063318.1 CDS JDM1_1734 NC_012984.1 1840189 1840428 D hypothetical protein 1840189..1840428 Lactobacillus plantarum JDM1 8190131 YP_003063319.1 CDS JDM1_1735 NC_012984.1 1840823 1841044 R hypothetical protein complement(1840823..1841044) Lactobacillus plantarum JDM1 8190132 YP_003063320.1 CDS JDM1_1736 NC_012984.1 1841212 1841628 R Transposase (orfB) of ISLsa2 (IS150 family) complement(1841212..1841628) Lactobacillus plantarum JDM1 8190133 YP_003063321.1 CDS JDM1_1737 NC_012984.1 1841688 1841828 R hypothetical protein complement(1841688..1841828) Lactobacillus plantarum JDM1 8190134 YP_003063322.1 CDS JDM1_1738 NC_012984.1 1843159 1844322 D prophage Lp2 protein 2, integrase 1843159..1844322 Lactobacillus plantarum JDM1 8190135 YP_003063323.1 CDS JDM1_1739 NC_012984.1 1844744 1845022 R hypothetical protein complement(1844744..1845022) Lactobacillus plantarum JDM1 8190137 YP_003063324.1 CDS JDM1_1740 NC_012984.1 1845125 1845376 R methyltransferase () complement(1845125..1845376) Lactobacillus plantarum JDM1 8190138 YP_003063325.1 CDS JDM1_1741 NC_012984.1 1845389 1845886 R methyltransferase () complement(1845389..1845886) Lactobacillus plantarum JDM1 8190139 YP_003063326.1 CDS JDM1_1742 NC_012984.1 1845998 1846345 D hypothetical protein 1845998..1846345 Lactobacillus plantarum JDM1 8190140 YP_003063327.1 CDS JDM1_1743 NC_012984.1 1846442 1847653 R hypothetical protein complement(1846442..1847653) Lactobacillus plantarum JDM1 8190141 YP_003063328.1 CDS JDM1_1744 NC_012984.1 1847769 1848353 D hypothetical protein 1847769..1848353 Lactobacillus plantarum JDM1 8190142 YP_003063329.1 CDS apt NC_012984.1 1848496 1849014 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(1848496..1849014) Lactobacillus plantarum JDM1 8187361 YP_003063330.1 CDS recJ NC_012984.1 1849033 1851369 R single-strand DNA-specific exonuclease RecJ complement(1849033..1851369) Lactobacillus plantarum JDM1 8187363 YP_003063331.1 CDS JDM1_1747 NC_012984.1 1851391 1851741 R hypothetical protein complement(1851391..1851741) Lactobacillus plantarum JDM1 8187364 YP_003063332.1 CDS JDM1_1748 NC_012984.1 1851754 1852545 R short-chain dehydrogenase/oxidoreductase complement(1851754..1852545) Lactobacillus plantarum JDM1 8187365 YP_003063333.1 CDS JDM1_1749 NC_012984.1 1852555 1853490 R beta-lactamase superfamily hydrolase complement(1852555..1853490) Lactobacillus plantarum JDM1 8187366 YP_003063334.1 CDS JDM1_1750 NC_012984.1 1853797 1854207 D hypothetical protein 1853797..1854207 Lactobacillus plantarum JDM1 8187367 YP_003063335.1 CDS obgE NC_012984.1 1854354 1855649 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(1854354..1855649) Lactobacillus plantarum JDM1 8187368 YP_003063336.1 CDS fruR NC_012984.1 1855897 1856652 D transcription regulator of fructose operon 1855897..1856652 Lactobacillus plantarum JDM1 8187369 YP_003063337.1 CDS fruK NC_012984.1 1856649 1857566 D 1-phosphofructokinase 1856649..1857566 Lactobacillus plantarum JDM1 8187370 YP_003063338.1 CDS pts16ABC NC_012984.1 1857588 1859555 D fructose PTS, EIIABC 1857588..1859555 Lactobacillus plantarum JDM1 8187371 YP_003063339.1 CDS JDM1_1755 NC_012984.1 1859695 1861017 D lipoprotein precursor 1859695..1861017 Lactobacillus plantarum JDM1 8187372 YP_003063340.1 CDS cps4J NC_012984.1 1861125 1862576 R transporter complement(1861125..1862576) Lactobacillus plantarum JDM1 8187373 YP_003063341.1 CDS cps4I NC_012984.1 1862656 1863624 R glycosyltransferase complement(1862656..1863624) Lactobacillus plantarum JDM1 8187374 YP_003063342.1 CDS cps4H NC_012984.1 1863609 1864883 R polysaccharide polymerase complement(1863609..1864883) Lactobacillus plantarum JDM1 8187375 YP_003063343.1 CDS cps4G NC_012984.1 1864880 1865908 R glycosyltransferase complement(1864880..1865908) Lactobacillus plantarum JDM1 8187376 YP_003063344.1 CDS cps4F NC_012984.1 1865924 1867015 R glycosyltransferase complement(1865924..1867015) Lactobacillus plantarum JDM1 8187377 YP_003063345.1 CDS cps4E NC_012984.1 1867015 1867686 R priming glycosyltransferase complement(1867015..1867686) Lactobacillus plantarum JDM1 8187378 YP_003063346.1 CDS JDM1_1762 NC_012984.1 1867667 1868032 R UDP-glucose 4-epimerase complement(1867667..1868032) Lactobacillus plantarum JDM1 8187379 YP_003063347.1 CDS JDM1_1763 NC_012984.1 1868166 1868606 R UDP-glucose 4-epimerase complement(1868166..1868606) Lactobacillus plantarum JDM1 8187380 YP_003063348.1 CDS cps4C NC_012984.1 1868622 1869401 R exopolysaccharide biosynthesis protein complement(1868622..1869401) Lactobacillus plantarum JDM1 8187381 YP_003063349.1 CDS cps4B NC_012984.1 1869382 1870089 R exopolysaccharide biosynthesis protein; chain length determinator complement(1869382..1870089) Lactobacillus plantarum JDM1 8187382 YP_003063350.1 CDS cps4A NC_012984.1 1870108 1870866 R exopolysaccharide biosynthesis protein complement(1870108..1870866) Lactobacillus plantarum JDM1 8187383 YP_003063351.1 CDS uvrC NC_012984.1 1871289 1873103 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C complement(1871289..1873103) Lactobacillus plantarum JDM1 8187384 YP_003063352.1 CDS glnQ3 NC_012984.1 1873286 1874026 R glutamine ABC transporter, ATP-binding protein complement(1873286..1874026) Lactobacillus plantarum JDM1 8187385 YP_003063353.1 CDS glnPH2 NC_012984.1 1874019 1875542 R glutamine ABC transporter, substrate binding and permease protein complement(1874019..1875542) Lactobacillus plantarum JDM1 8187386 YP_003063354.1 CDS JDM1_1770 NC_012984.1 1875700 1875870 D hypothetical protein 1875700..1875870 Lactobacillus plantarum JDM1 8187387 YP_003063355.1 CDS JDM1_1771 NC_012984.1 1875926 1876333 R hypothetical protein complement(1875926..1876333) Lactobacillus plantarum JDM1 8187388 YP_003063356.1 CDS JDM1_1772 NC_012984.1 1876580 1876876 R hypothetical protein complement(1876580..1876876) Lactobacillus plantarum JDM1 8187389 YP_003063357.1 CDS engB NC_012984.1 1876878 1877471 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(1876878..1877471) Lactobacillus plantarum JDM1 8187390 YP_003063358.1 CDS clpX NC_012984.1 1877630 1878895 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(1877630..1878895) Lactobacillus plantarum JDM1 8187391 YP_003063359.1 CDS tig NC_012984.1 1879190 1880512 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(1879190..1880512) Lactobacillus plantarum JDM1 8187392 YP_003063360.1 CDS tuf NC_012984.1 1880716 1881903 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(1880716..1881903) Lactobacillus plantarum JDM1 8187393 YP_003063361.1 CDS JDM1_1777 NC_012984.1 1882118 1883032 R hypothetical protein complement(1882118..1883032) Lactobacillus plantarum JDM1 8187394 YP_003063362.1 CDS JDM1_1778 NC_012984.1 1883095 1884819 R metallo-beta-lactamase superfamily protein () complement(1883095..1884819) Lactobacillus plantarum JDM1 8187395 YP_003063363.1 CDS dapA1 NC_012984.1 1884839 1885711 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(1884839..1885711) Lactobacillus plantarum JDM1 8187396 YP_003063364.1 CDS JDM1_1780 NC_012984.1 1885829 1887031 R multidrug transport protein complement(1885829..1887031) Lactobacillus plantarum JDM1 8187397 YP_003063365.1 CDS rpsO NC_012984.1 1887168 1887437 R 30S ribosomal protein S15 complement(1887168..1887437) Lactobacillus plantarum JDM1 8187398 YP_003063366.1 CDS rpsT NC_012984.1 1887665 1887919 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1887665..1887919 Lactobacillus plantarum JDM1 8187399 YP_003063367.1 CDS holA NC_012984.1 1888096 1889157 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(1888096..1889157) Lactobacillus plantarum JDM1 8187400 YP_003063368.1 CDS comEC NC_012984.1 1889108 1891399 R competence protein ComE complement(1889108..1891399) Lactobacillus plantarum JDM1 8187401 YP_003063369.1 CDS comEB NC_012984.1 1891400 1891888 R dCMP deaminase complement(1891400..1891888) Lactobacillus plantarum JDM1 8187402 YP_003063370.1 CDS JDM1_1786 NC_012984.1 1891940 1892230 R competence protein complement(1891940..1892230) Lactobacillus plantarum JDM1 8187403 YP_003063371.1 CDS JDM1_1787 NC_012984.1 1892243 1892665 R competence protein complement(1892243..1892665) Lactobacillus plantarum JDM1 8187404 YP_003063372.1 CDS lon NC_012984.1 1892768 1893814 R endopeptidase La () complement(1892768..1893814) Lactobacillus plantarum JDM1 8187405 YP_003063373.1 CDS coaD NC_012984.1 1893807 1894298 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(1893807..1894298) Lactobacillus plantarum JDM1 8187406 YP_003063374.1 CDS JDM1_1790 NC_012984.1 1894302 1894865 R N-6 adenine-specific DNA methylase complement(1894302..1894865) Lactobacillus plantarum JDM1 8187407 YP_003063375.1 CDS JDM1_1791 NC_012984.1 1894881 1895183 R hypothetical protein complement(1894881..1895183) Lactobacillus plantarum JDM1 8187408 YP_003063376.1 CDS pycA NC_012984.1 1895344 1898778 R biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase complement(1895344..1898778) Lactobacillus plantarum JDM1 8187409 YP_003063377.1 CDS ftsW NC_012984.1 1898806 1899972 R cell division protein FtsW complement(1898806..1899972) Lactobacillus plantarum JDM1 8187410 YP_003063378.1 CDS JDM1_1794 NC_012984.1 1900435 1902024 R hypothetical protein complement(1900435..1902024) Lactobacillus plantarum JDM1 8187411 YP_003063379.1 CDS ica2 NC_012984.1 1902126 1903481 R glycosyltransferase () complement(1902126..1903481) Lactobacillus plantarum JDM1 8187412 YP_003063380.1 CDS JDM1_1796 NC_012984.1 1903478 1904077 R hypothetical protein complement(1903478..1904077) Lactobacillus plantarum JDM1 8187413 YP_003063381.1 CDS JDM1_1797 NC_012984.1 1905123 1906424 R hypothetical protein complement(1905123..1906424) Lactobacillus plantarum JDM1 8187414 YP_003063382.1 CDS typA NC_012984.1 1906692 1908530 R GTP-binding protein TypA complement(1906692..1908530) Lactobacillus plantarum JDM1 8187415 YP_003063383.1 CDS suhB NC_012984.1 1908720 1909493 R myo-inositol-1(or 4)-monophosphatase complement(1908720..1909493) Lactobacillus plantarum JDM1 8187416 YP_003063384.1 CDS JDM1_1800 NC_012984.1 1909504 1909797 R hypothetical protein complement(1909504..1909797) Lactobacillus plantarum JDM1 8187417 YP_003063385.1 CDS ldhL1 NC_012984.1 1909784 1910716 R L-lactate dehydrogenase complement(1909784..1910716) Lactobacillus plantarum JDM1 8187418 YP_003063386.1 CDS pdhD NC_012984.1 1911121 1912533 R E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase complement(1911121..1912533) Lactobacillus plantarum JDM1 8187419 YP_003063387.1 CDS pdhC NC_012984.1 1912541 1913857 R pyruvate dehydrogenase complex, E2 component; dihydrolipoamide S-acetyltransferase complement(1912541..1913857) Lactobacillus plantarum JDM1 8187420 YP_003063388.1 CDS pdhB NC_012984.1 1913915 1914892 R pyruvate dehydrogenase complex, E1 component, beta subunit complement(1913915..1914892) Lactobacillus plantarum JDM1 8187421 YP_003063389.1 CDS pdhA NC_012984.1 1914894 1916006 R pyruvate dehydrogenase complex, E1 component, alpha subunit complement(1914894..1916006) Lactobacillus plantarum JDM1 8187422 YP_003063390.1 CDS def NC_012984.1 1916291 1916851 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1916291..1916851 Lactobacillus plantarum JDM1 8187423 YP_003063391.1 CDS JDM1_1807 NC_012984.1 1916881 1917393 R hypothetical protein complement(1916881..1917393) Lactobacillus plantarum JDM1 8187424 YP_003063392.1 CDS JDM1_1808 NC_012984.1 1917670 1917888 D hypothetical protein 1917670..1917888 Lactobacillus plantarum JDM1 8187425 YP_003063393.1 CDS JDM1_1809 NC_012984.1 1917885 1919561 D metallo-beta-lactamase superfamily protein () 1917885..1919561 Lactobacillus plantarum JDM1 8187426 YP_003063394.1 CDS JDM1_1810 NC_012984.1 1919624 1919881 D transcription regulator 1919624..1919881 Lactobacillus plantarum JDM1 8187427 YP_003063395.1 CDS JDM1_1811 NC_012984.1 1919957 1920583 D transcription regulator 1919957..1920583 Lactobacillus plantarum JDM1 8187428 YP_003063396.1 CDS JDM1_1812 NC_012984.1 1920806 1921009 R hypothetical protein complement(1920806..1921009) Lactobacillus plantarum JDM1 8187429 YP_003063397.1 CDS JDM1_1813 NC_012984.1 1921183 1922673 R gamma-D-glutamate-meso-diaminopimelate muropeptidase complement(1921183..1922673) Lactobacillus plantarum JDM1 8187430 YP_003063398.1 CDS prs2 NC_012984.1 1923032 1923997 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(1923032..1923997) Lactobacillus plantarum JDM1 8187431 YP_003063399.1 CDS recD NC_012984.1 1924152 1926701 R exodeoxyribonuclease V subunit alpha complement(1924152..1926701) Lactobacillus plantarum JDM1 8187432 YP_003063400.1 CDS JDM1_1816 NC_012984.1 1926717 1927391 R hypothetical protein complement(1926717..1927391) Lactobacillus plantarum JDM1 8187433 YP_003063401.1 CDS pgm6 NC_012984.1 1927412 1928077 R phosphoglycerate mutase complement(1927412..1928077) Lactobacillus plantarum JDM1 8187434 YP_003063402.1 CDS JDM1_1818 NC_012984.1 1928601 1930040 R hypothetical protein complement(1928601..1930040) Lactobacillus plantarum JDM1 8187435 YP_003063403.1 CDS JDM1_1819 NC_012984.1 1930047 1931096 R cell surface protein precursor complement(1930047..1931096) Lactobacillus plantarum JDM1 8187436 YP_003063404.1 CDS JDM1_1820 NC_012984.1 1931140 1931871 R hypothetical protein complement(1931140..1931871) Lactobacillus plantarum JDM1 8187437 YP_003063405.1 CDS ktrA NC_012984.1 1932153 1932815 R potassium uptake protein complement(1932153..1932815) Lactobacillus plantarum JDM1 8187438 YP_003063406.1 CDS ntpJ NC_012984.1 1932825 1934183 R sodium ATP synthase, Na(+) translocating subunit J complement(1932825..1934183) Lactobacillus plantarum JDM1 8187439 YP_003063407.1 CDS mnmA NC_012984.1 1934373 1935497 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(1934373..1935497) Lactobacillus plantarum JDM1 8187440 YP_003063408.1 CDS JDM1_1824 NC_012984.1 1935614 1935955 R hypothetical protein complement(1935614..1935955) Lactobacillus plantarum JDM1 8187441 YP_003063409.1 CDS csd2 NC_012984.1 1935958 1937118 R cysteine desulfurase complement(1935958..1937118) Lactobacillus plantarum JDM1 8187442 YP_003063410.1 CDS mtn NC_012984.1 1937177 1937869 R methylthioadenosine nucleosidase; S-adenosylhomocysteine nucleosidase complement(1937177..1937869) Lactobacillus plantarum JDM1 8187443 YP_003063411.1 CDS JDM1_1827 NC_012984.1 1937890 1938141 R hypothetical protein complement(1937890..1938141) Lactobacillus plantarum JDM1 8188959 YP_003063412.1 CDS JDM1_1828 NC_012984.1 1938141 1938695 R ADP-ribose pyrophosphatase complement(1938141..1938695) Lactobacillus plantarum JDM1 8188960 YP_003063413.1 CDS dapF NC_012984.1 1938890 1939888 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(1938890..1939888) Lactobacillus plantarum JDM1 8188961 YP_003063414.1 CDS ileS NC_012984.1 1940222 1943020 R IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase complement(1940222..1943020) Lactobacillus plantarum JDM1 8188962 YP_003063415.1 CDS divIVA NC_012984.1 1943334 1944032 R cell division initiation protein DivIVA complement(1943334..1944032) Lactobacillus plantarum JDM1 8188963 YP_003063416.1 CDS JDM1_1832 NC_012984.1 1944050 1944835 R cell division protein () complement(1944050..1944835) Lactobacillus plantarum JDM1 8188964 YP_003063417.1 CDS JDM1_1833 NC_012984.1 1944859 1945119 R cell division protein () complement(1944859..1945119) Lactobacillus plantarum JDM1 8188965 YP_003063418.1 CDS JDM1_1834 NC_012984.1 1945132 1945554 R cell division protein () complement(1945132..1945554) Lactobacillus plantarum JDM1 8188966 YP_003063419.1 CDS ftsZ NC_012984.1 1945578 1946861 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(1945578..1946861) Lactobacillus plantarum JDM1 8188967 YP_003063420.1 CDS ftsA NC_012984.1 1946891 1948237 R cell division protein FtsA complement(1946891..1948237) Lactobacillus plantarum JDM1 8188968 YP_003063421.1 CDS ftsQ NC_012984.1 1948354 1949238 R cell division protein FtsQ complement(1948354..1949238) Lactobacillus plantarum JDM1 8188969 YP_003063422.1 CDS murG NC_012984.1 1949260 1950351 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase complement(1949260..1950351) Lactobacillus plantarum JDM1 8188970 YP_003063423.1 CDS murD NC_012984.1 1950351 1951730 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(1950351..1951730) Lactobacillus plantarum JDM1 8188971 YP_003063424.1 CDS mraY NC_012984.1 1952011 1952976 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(1952011..1952976) Lactobacillus plantarum JDM1 8188972 YP_003063425.1 CDS pbp2B2 NC_012984.1 1953005 1955146 R penicillin binding protein 2B complement(1953005..1955146) Lactobacillus plantarum JDM1 8188973 YP_003063426.1 CDS ftsL NC_012984.1 1955143 1955538 R cell division protein FtsL () complement(1955143..1955538) Lactobacillus plantarum JDM1 8188974 YP_003063427.1 CDS mraW NC_012984.1 1955560 1956519 R S-adenosyl-methyltransferase MraW complement(1955560..1956519) Lactobacillus plantarum JDM1 8188975 YP_003063428.1 CDS mraZ NC_012984.1 1956553 1956978 R MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ complement(1956553..1956978) Lactobacillus plantarum JDM1 8188976 YP_003063429.1 CDS JDM1_1845 NC_012984.1 1957147 1957515 R hypothetical protein complement(1957147..1957515) Lactobacillus plantarum JDM1 8188977 YP_003063430.1 CDS JDM1_1846 NC_012984.1 1957631 1958590 D Mg2+ and Co2+ transport protein 1957631..1958590 Lactobacillus plantarum JDM1 8188978 YP_003063431.1 CDS ftsK2 NC_012984.1 1959097 1961505 R DNA translocase FtsK complement(1959097..1961505) Lactobacillus plantarum JDM1 8188979 YP_003063432.1 CDS cspR NC_012984.1 1961597 1962109 R rRNA methyltransferase complement(1961597..1962109) Lactobacillus plantarum JDM1 8188980 YP_003063433.1 CDS JDM1_1849 NC_012984.1 1962401 1963048 D hypothetical protein 1962401..1963048 Lactobacillus plantarum JDM1 8188981 YP_003063434.1 CDS brnQ2 NC_012984.1 1963383 1964732 D branched-chain amino acid transport protein 1963383..1964732 Lactobacillus plantarum JDM1 8188982 YP_003063435.1 CDS JDM1_1852 NC_012984.1 1965011 1965100 D hypothetical protein 1965011..1965100 Lactobacillus plantarum JDM1 8188983 YP_003063436.1 CDS rrmA NC_012984.1 1965080 1965934 R rRNA large subunit methyltransferase A complement(1965080..1965934) Lactobacillus plantarum JDM1 8188985 YP_003063437.1 CDS rpsN2 NC_012984.1 1966201 1966470 D ribosomal protein S14-2 1966201..1966470 Lactobacillus plantarum JDM1 8188984 YP_003063438.1 CDS JDM1_1854 NC_012984.1 1966632 1967786 R transport protein complement(1966632..1967786) Lactobacillus plantarum JDM1 8188986 YP_003063439.1 CDS pts17A NC_012984.1 1967801 1968160 R glucitol/sorbitol PTS, EIIA complement(1967801..1968160) Lactobacillus plantarum JDM1 8188987 YP_003063440.1 CDS JDM1_1856 NC_012984.1 1968292 1969311 D hypothetical protein 1968292..1969311 Lactobacillus plantarum JDM1 8188988 YP_003063441.1 CDS cutC NC_012984.1 1969327 1969965 D copper homeostasis protein 1969327..1969965 Lactobacillus plantarum JDM1 8188989 YP_003063442.1 CDS rluD2 NC_012984.1 1970219 1971121 R pseudouridylate synthase complement(1970219..1971121) Lactobacillus plantarum JDM1 8188990 YP_003063443.1 CDS ppnK NC_012984.1 1971118 1971921 R catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase complement(1971118..1971921) Lactobacillus plantarum JDM1 8188991 YP_003063444.1 CDS JDM1_1860 NC_012984.1 1971918 1972580 R GTP pyrophosphokinase complement(1971918..1972580) Lactobacillus plantarum JDM1 8188992 YP_003063445.1 CDS JDM1_1861 NC_012984.1 1972873 1973508 D hypothetical protein 1972873..1973508 Lactobacillus plantarum JDM1 8188993 YP_003063446.1 CDS pepF1 NC_012984.1 1973723 1975534 R oligoendopeptidase F complement(1973723..1975534) Lactobacillus plantarum JDM1 8188994 YP_003063447.1 CDS coiA NC_012984.1 1975612 1976697 R competence protein complement(1975612..1976697) Lactobacillus plantarum JDM1 8188995 YP_003063448.1 CDS mecA NC_012984.1 1976882 1977613 R enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence; adaptor protein complement(1976882..1977613) Lactobacillus plantarum JDM1 8188996 YP_003063449.1 CDS nrpR3 NC_012984.1 1977749 1978147 R negative regulator of proteolysis complement(1977749..1978147) Lactobacillus plantarum JDM1 8188997 YP_003063450.1 CDS JDM1_1866 NC_012984.1 1978434 1979177 R beta-lactamase superfamily hydrolase complement(1978434..1979177) Lactobacillus plantarum JDM1 8188998 YP_003063451.1 CDS JDM1_1867 NC_012984.1 1979318 1979818 D hypothetical protein 1979318..1979818 Lactobacillus plantarum JDM1 8188999 YP_003063452.1 CDS JDM1_1868 NC_012984.1 1987636 1988016 R hypothetical protein complement(1987636..1988016) Lactobacillus plantarum JDM1 8189027 YP_003063453.1 CDS JDM1_1869 NC_012984.1 1988016 1988423 R polyribonucleotide nucleotidyltransferase complement(1988016..1988423) Lactobacillus plantarum JDM1 8189028 YP_003063454.1 CDS ppiB NC_012984.1 1988553 1989137 R peptidylprolyl isomerase complement(1988553..1989137) Lactobacillus plantarum JDM1 8189029 YP_003063455.1 CDS JDM1_1871 NC_012984.1 1989301 1989957 D hypothetical protein 1989301..1989957 Lactobacillus plantarum JDM1 8189030 YP_003063456.1 CDS JDM1_1872 NC_012984.1 1990048 1990689 R hypothetical protein complement(1990048..1990689) Lactobacillus plantarum JDM1 8189031 YP_003063457.1 CDS JDM1_1873 NC_012984.1 1990673 1991464 R HAD superfamily sugar phosphatase complement(1990673..1991464) Lactobacillus plantarum JDM1 8189032 YP_003063458.1 CDS JDM1_1874 NC_012984.1 1991486 1992115 R hypothetical protein complement(1991486..1992115) Lactobacillus plantarum JDM1 8189033 YP_003063459.1 CDS JDM1_1875 NC_012984.1 1992134 1993519 R 5'-nucleotidase complement(1992134..1993519) Lactobacillus plantarum JDM1 8189738 YP_003063460.1 CDS JDM1_1876 NC_012984.1 1993589 1994197 R phosphoesterase () complement(1993589..1994197) Lactobacillus plantarum JDM1 8188880 YP_003063461.1 CDS JDM1_1877 NC_012984.1 1994307 1994519 D hypothetical protein 1994307..1994519 Lactobacillus plantarum JDM1 8188881 YP_003063462.1 CDS JDM1_1878 NC_012984.1 1994713 1996098 R amino acid transport protein complement(1994713..1996098) Lactobacillus plantarum JDM1 8188882 YP_003063463.1 CDS ack3 NC_012984.1 1996418 1997611 R acetate kinase complement(1996418..1997611) Lactobacillus plantarum JDM1 8188883 YP_003063464.1 CDS JDM1_1880 NC_012984.1 1997623 1998633 R type I restriction-modification system methyltransferase subunit () complement(1997623..1998633) Lactobacillus plantarum JDM1 8188884 YP_003063465.1 CDS JDM1_1881 NC_012984.1 1998845 1999429 R hypothetical protein complement(1998845..1999429) Lactobacillus plantarum JDM1 8188885 YP_003063466.1 CDS JDM1_1882 NC_012984.1 1999504 1999977 R hypothetical protein complement(1999504..1999977) Lactobacillus plantarum JDM1 8188886 YP_003063467.1 CDS comGC NC_012984.1 1999967 2000323 R competence protein ComG complement(1999967..2000323) Lactobacillus plantarum JDM1 8188887 YP_003063468.1 CDS comGB NC_012984.1 2000320 2001369 R competence protein ComG complement(2000320..2001369) Lactobacillus plantarum JDM1 8188888 YP_003063469.1 CDS comGA NC_012984.1 2001305 2002279 R competence protein ComG complement(2001305..2002279) Lactobacillus plantarum JDM1 8188889 YP_003063470.1 CDS rbsK2 NC_012984.1 2002479 2003399 R ribokinase complement(2002479..2003399) Lactobacillus plantarum JDM1 8188890 YP_003063471.1 CDS JDM1_1887 NC_012984.1 2003536 2004264 R hypothetical protein complement(2003536..2004264) Lactobacillus plantarum JDM1 8188891 YP_003063472.1 CDS JDM1_1888 NC_012984.1 2004482 2004802 R hypothetical protein complement(2004482..2004802) Lactobacillus plantarum JDM1 8188892 YP_003063473.1 CDS JDM1_1889 NC_012984.1 2004795 2005667 R hypothetical protein complement(2004795..2005667) Lactobacillus plantarum JDM1 8188893 YP_003063474.1 CDS ccpA NC_012984.1 2005790 2006800 R catabolite control protein A complement(2005790..2006800) Lactobacillus plantarum JDM1 8188894 YP_003063475.1 CDS pepQ NC_012984.1 2007064 2008173 D Xaa-Pro dipeptidase 2007064..2008173 Lactobacillus plantarum JDM1 8188895 YP_003063476.1 CDS JDM1_1892 NC_012984.1 2008259 2008720 R transcription regulator complement(2008259..2008720) Lactobacillus plantarum JDM1 8188896 YP_003063477.1 CDS JDM1_1893 NC_012984.1 2008790 2009302 R hypothetical protein complement(2008790..2009302) Lactobacillus plantarum JDM1 8188897 YP_003063478.1 CDS JDM1_1894 NC_012984.1 2009305 2009721 R hypothetical protein complement(2009305..2009721) Lactobacillus plantarum JDM1 8188898 YP_003063479.1 CDS JDM1_1895 NC_012984.1 2009910 2010803 D mechanosensitive ion channel MscS 2009910..2010803 Lactobacillus plantarum JDM1 8188899 YP_003063480.1 CDS JDM1_1896 NC_012984.1 2011071 2012225 R amino acid amidohydrolase complement(2011071..2012225) Lactobacillus plantarum JDM1 8188900 YP_003063481.1 CDS dapD NC_012984.1 2012243 2012953 R 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(2012243..2012953) Lactobacillus plantarum JDM1 8188901 YP_003063482.1 CDS JDM1_1898 NC_012984.1 2012972 2013463 R hypothetical protein complement(2012972..2013463) Lactobacillus plantarum JDM1 8188902 YP_003063483.1 CDS JDM1_1899 NC_012984.1 2013551 2014069 R phosphoesterase () complement(2013551..2014069) Lactobacillus plantarum JDM1 8188903 YP_003063484.1 CDS xtp1 NC_012984.1 2014066 2014674 R HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase complement(2014066..2014674) Lactobacillus plantarum JDM1 8188904 YP_003063485.1 CDS murI NC_012984.1 2014667 2015488 R converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase complement(2014667..2015488) Lactobacillus plantarum JDM1 8188905 YP_003063486.1 CDS JDM1_1902 NC_012984.1 2015526 2016209 D hypothetical protein 2015526..2016209 Lactobacillus plantarum JDM1 8188906 YP_003063487.1 CDS trxA2 NC_012984.1 2016377 2016688 R thioredoxin complement(2016377..2016688) Lactobacillus plantarum JDM1 8188907 YP_003063488.1 CDS mutS NC_012984.1 2016844 2019207 R DNA mismatch repair protein MutS2 complement(2016844..2019207) Lactobacillus plantarum JDM1 8188908 YP_003063489.1 CDS JDM1_1905 NC_012984.1 2019267 2019545 R hypothetical protein complement(2019267..2019545) Lactobacillus plantarum JDM1 8188909 YP_003063490.1 CDS JDM1_1906 NC_012984.1 2019650 2019946 R hypothetical protein complement(2019650..2019946) Lactobacillus plantarum JDM1 8188910 YP_003063491.1 CDS JDM1_1907 NC_012984.1 2019959 2020393 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(2019959..2020393) Lactobacillus plantarum JDM1 8188911 YP_003063492.1 CDS JDM1_1908 NC_012984.1 2020390 2020659 R hypothetical protein complement(2020390..2020659) Lactobacillus plantarum JDM1 8188912 YP_003063493.1 CDS alaS NC_012984.1 2021046 2023688 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(2021046..2023688) Lactobacillus plantarum JDM1 8188913 YP_003063494.1 CDS rhe3 NC_012984.1 2024016 2025359 R ATP-dependent RNA helicase complement(2024016..2025359) Lactobacillus plantarum JDM1 8188914 YP_003063495.1 CDS JDM1_1911 NC_012984.1 2025362 2026318 R exopolyphosphatase complement(2025362..2026318) Lactobacillus plantarum JDM1 8188915 YP_003063496.1 CDS dinP NC_012984.1 2026411 2027511 R DNA-damage-inducible protein P complement(2026411..2027511) Lactobacillus plantarum JDM1 8188916 YP_003063497.1 CDS JDM1_1913 NC_012984.1 2027674 2028057 R preprotein translocase, subunit () complement(2027674..2028057) Lactobacillus plantarum JDM1 8188917 YP_003063498.1 CDS tgt NC_012984.1 2028135 2029277 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(2028135..2029277) Lactobacillus plantarum JDM1 8188918 YP_003063499.1 CDS queA NC_012984.1 2029587 2030621 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase complement(2029587..2030621) Lactobacillus plantarum JDM1 8188919 YP_003063500.1 CDS ruvB NC_012984.1 2030639 2031649 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(2030639..2031649) Lactobacillus plantarum JDM1 8188920 YP_003063501.1 CDS ruvA NC_012984.1 2031667 2032278 R holliday junction DNA helicase RuvA complement(2031667..2032278) Lactobacillus plantarum JDM1 8188921 YP_003063502.1 CDS JDM1_1918 NC_012984.1 2032479 2032997 D hypothetical protein 2032479..2032997 Lactobacillus plantarum JDM1 8188922 YP_003063503.1 CDS JDM1_1919 NC_012984.1 2033131 2036199 R hypothetical protein complement(2033131..2036199) Lactobacillus plantarum JDM1 8188923 YP_003063504.1 CDS JDM1_1920 NC_012984.1 2036353 2036760 R hypothetical protein complement(2036353..2036760) Lactobacillus plantarum JDM1 8188924 YP_003063505.1 CDS mutL NC_012984.1 2037799 2039835 R This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein complement(2037799..2039835) Lactobacillus plantarum JDM1 8188925 YP_003063506.1 CDS hexA NC_012984.1 2040003 2042693 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(2040003..2042693) Lactobacillus plantarum JDM1 8188926 YP_003063507.1 CDS JDM1_1923 NC_012984.1 2042721 2043527 R hypothetical protein complement(2042721..2043527) Lactobacillus plantarum JDM1 8188927 YP_003063508.1 CDS JDM1_1924 NC_012984.1 2043652 2045211 R protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase complement(2043652..2045211) Lactobacillus plantarum JDM1 8188928 YP_003063509.1 CDS recA NC_012984.1 2045442 2046584 R catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A complement(2045442..2046584) Lactobacillus plantarum JDM1 8188929 YP_003063510.1 CDS cinA NC_012984.1 2046676 2047938 R competence damage-inducible protein A complement(2046676..2047938) Lactobacillus plantarum JDM1 8188930 YP_003063511.1 CDS pgsA NC_012984.1 2048206 2048790 R CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(2048206..2048790) Lactobacillus plantarum JDM1 8188931 YP_003063512.1 CDS JDM1_1928 NC_012984.1 2048813 2049700 R hypothetical protein complement(2048813..2049700) Lactobacillus plantarum JDM1 8188932 YP_003063513.1 CDS JDM1_1929 NC_012984.1 2049789 2051090 R zinc-dependent proteinase complement(2049789..2051090) Lactobacillus plantarum JDM1 8188933 YP_003063514.1 CDS JDM1_1930 NC_012984.1 2051087 2052352 R hypothetical protein complement(2051087..2052352) Lactobacillus plantarum JDM1 8188934 YP_003063515.1 CDS thrA2 NC_012984.1 2052562 2053914 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive; aspartate kinase 2052562..2053914 Lactobacillus plantarum JDM1 8188935 YP_003063516.1 CDS glnH2 NC_012984.1 2054998 2055837 R glutamine ABC transporter, substrate binding protein complement(2054998..2055837) Lactobacillus plantarum JDM1 8188936 YP_003063517.1 CDS glnQ4 NC_012984.1 2055850 2056491 R glutamine ABC transporter, ATP-binding protein complement(2055850..2056491) Lactobacillus plantarum JDM1 8188937 YP_003063518.1 CDS glnP2 NC_012984.1 2056504 2057145 R glutamine ABC transporter, permease protein complement(2056504..2057145) Lactobacillus plantarum JDM1 8188938 YP_003063519.1 CDS minD NC_012984.1 2057625 2058431 R septum site-determining protein MinD complement(2057625..2058431) Lactobacillus plantarum JDM1 8188939 YP_003063520.1 CDS minC NC_012984.1 2058431 2059099 R septum site-determining protein MinC complement(2058431..2059099) Lactobacillus plantarum JDM1 8188940 YP_003063521.1 CDS mreD NC_012984.1 2059121 2059639 R cell shape determining protein MreD complement(2059121..2059639) Lactobacillus plantarum JDM1 8188941 YP_003063522.1 CDS mreC NC_012984.1 2059652 2060497 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(2059652..2060497) Lactobacillus plantarum JDM1 8188942 YP_003063523.1 CDS mreB1 NC_012984.1 2060568 2061572 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(2060568..2061572) Lactobacillus plantarum JDM1 8188943 YP_003063524.1 CDS JDM1_1940 NC_012984.1 2061798 2062433 R DNA repair protein complement(2061798..2062433) Lactobacillus plantarum JDM1 8188944 YP_003063525.1 CDS folC1 NC_012984.1 2062605 2063939 R folylpolyglutamate synthase complement(2062605..2063939) Lactobacillus plantarum JDM1 8188945 YP_003063526.1 CDS valS NC_012984.1 2064113 2066782 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(2064113..2066782) Lactobacillus plantarum JDM1 8188946 YP_003063527.1 CDS tpx NC_012984.1 2067106 2067600 R thiol peroxidase complement(2067106..2067600) Lactobacillus plantarum JDM1 8188947 YP_003063528.1 CDS gshA NC_012984.1 2067840 2069078 R glutamate-cysteine ligase () complement(2067840..2069078) Lactobacillus plantarum JDM1 8188948 YP_003063529.1 CDS thiI NC_012984.1 2069283 2070500 R Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI complement(2069283..2070500) Lactobacillus plantarum JDM1 8188949 YP_003063530.1 CDS csd3 NC_012984.1 2070518 2071672 R cysteine desulfurase complement(2070518..2071672) Lactobacillus plantarum JDM1 8188950 YP_003063531.1 CDS ezrA NC_012984.1 2071984 2073705 R acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation; septation ring formation regulator EzrA complement(2071984..2073705) Lactobacillus plantarum JDM1 8188951 YP_003063532.1 CDS JDM1_1948 NC_012984.1 2073877 2074338 D signal protein 2073877..2074338 Lactobacillus plantarum JDM1 8188952 YP_003063533.1 CDS rpsD NC_012984.1 2074540 2075148 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 2074540..2075148 Lactobacillus plantarum JDM1 8188953 YP_003063534.1 CDS JDM1_1950 NC_012984.1 2075207 2075833 R hypothetical protein complement(2075207..2075833) Lactobacillus plantarum JDM1 8188954 YP_003063535.1 CDS JDM1_1951 NC_012984.1 2075966 2076430 D hypothetical protein 2075966..2076430 Lactobacillus plantarum JDM1 8188955 YP_003063536.1 CDS JDM1_1952 NC_012984.1 2076486 2077112 R hypothetical protein complement(2076486..2077112) Lactobacillus plantarum JDM1 8188956 YP_003063537.1 CDS JDM1_1953 NC_012984.1 2077112 2077390 R transcription regulator complement(2077112..2077390) Lactobacillus plantarum JDM1 8188957 YP_003063538.1 CDS JDM1_1954 NC_012984.1 2077557 2079812 R Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; bifunctional glutamate--cysteine ligase/glutathione synthetase complement(2077557..2079812) Lactobacillus plantarum JDM1 8188958 YP_003063539.1 CDS cshA3 NC_012984.1 2079922 2081202 D recombination factor protein RarA 2079922..2081202 Lactobacillus plantarum JDM1 8189570 YP_003063540.1 CDS JDM1_1956 NC_012984.1 2081833 2082117 D hypothetical protein 2081833..2082117 Lactobacillus plantarum JDM1 8189904 YP_003063541.1 CDS JDM1_1957 NC_012984.1 2082184 2082666 D hypothetical protein 2082184..2082666 Lactobacillus plantarum JDM1 8189905 YP_003063542.1 CDS bla2 NC_012984.1 2082755 2083885 R beta-lactamase () complement(2082755..2083885) Lactobacillus plantarum JDM1 8189906 YP_003063543.1 CDS JDM1_1959 NC_012984.1 2084003 2084899 R hypothetical protein complement(2084003..2084899) Lactobacillus plantarum JDM1 8189907 YP_003063544.1 CDS glpQ3 NC_012984.1 2085349 2086908 R glycerophosphodiester phosphodiesterase complement(2085349..2086908) Lactobacillus plantarum JDM1 8189908 YP_003063545.1 CDS ddl NC_012984.1 2086984 2088096 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A complement(2086984..2088096) Lactobacillus plantarum JDM1 8189909 YP_003063546.1 CDS JDM1_1962 NC_012984.1 2088198 2089226 R oxidoreductase complement(2088198..2089226) Lactobacillus plantarum JDM1 8189910 YP_003063547.1 CDS JDM1_1963 NC_012984.1 2089248 2090222 R hypothetical protein complement(2089248..2090222) Lactobacillus plantarum JDM1 8189911 YP_003063548.1 CDS hicD3 NC_012984.1 2090421 2091338 R L-2-hydroxyisocaproate dehydrogenase complement(2090421..2091338) Lactobacillus plantarum JDM1 8189912 YP_003063549.1 CDS JDM1_1965 NC_012984.1 2091581 2092405 R amino acid ABC transporter substrate-binding protein complement(2091581..2092405) Lactobacillus plantarum JDM1 8189913 YP_003063550.1 CDS JDM1_1966 NC_012984.1 2092431 2093123 R amino acid ABC transporter permease complement(2092431..2093123) Lactobacillus plantarum JDM1 8189914 YP_003063551.1 CDS JDM1_1967 NC_012984.1 2093116 2094147 R amino acid ABC transporter ATP-binding protein complement(2093116..2094147) Lactobacillus plantarum JDM1 8189915 YP_003063552.1 CDS gcsH2 NC_012984.1 2094515 2094811 R glycine cleavage system, H protein complement(2094515..2094811) Lactobacillus plantarum JDM1 8189916 YP_003063553.1 CDS rodA2 NC_012984.1 2094842 2096047 R rod-shape determining protein complement(2094842..2096047) Lactobacillus plantarum JDM1 8189917 YP_003063554.1 CDS JDM1_1970 NC_012984.1 2096195 2096422 R hypothetical protein complement(2096195..2096422) Lactobacillus plantarum JDM1 8189918 YP_003063555.1 CDS hlyA NC_012984.1 2096406 2096678 R alpha-hemolysin-like protein complement(2096406..2096678) Lactobacillus plantarum JDM1 8189919 YP_003063556.1 CDS mreB2 NC_012984.1 2096685 2097686 R rod shape-determining protein MreB complement(2096685..2097686) Lactobacillus plantarum JDM1 8189920 YP_003063557.1 CDS JDM1_1973 NC_012984.1 2097810 2098364 R ribosomal protein acetylating enzyme complement(2097810..2098364) Lactobacillus plantarum JDM1 8189921 YP_003063558.1 CDS murA2 NC_012984.1 2098472 2099788 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(2098472..2099788) Lactobacillus plantarum JDM1 8189922 YP_003063559.1 CDS atpC NC_012984.1 2100761 2101189 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; ATP synthase F0F1 subunit epsilon complement(2100761..2101189) Lactobacillus plantarum JDM1 8189923 YP_003063560.1 CDS atpD NC_012984.1 2101201 2102604 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta complement(2101201..2102604) Lactobacillus plantarum JDM1 8189924 YP_003063561.1 CDS atpG NC_012984.1 2102629 2103573 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma complement(2102629..2103573) Lactobacillus plantarum JDM1 8189925 YP_003063562.1 CDS atpA NC_012984.1 2103603 2105123 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha complement(2103603..2105123) Lactobacillus plantarum JDM1 8189926 YP_003063563.1 CDS atpH NC_012984.1 2105146 2105691 R Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta complement(2105146..2105691) Lactobacillus plantarum JDM1 8189927 YP_003063564.1 CDS atpF NC_012984.1 2105681 2106196 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; ATP synthase F0F1 subunit B complement(2105681..2106196) Lactobacillus plantarum JDM1 8189928 YP_003063565.1 CDS atpE NC_012984.1 2106250 2106462 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; ATP synthase F0F1 subunit C complement(2106250..2106462) Lactobacillus plantarum JDM1 8189929 YP_003063566.1 CDS atpB NC_012984.1 2106500 2107213 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A complement(2106500..2107213) Lactobacillus plantarum JDM1 8189930 YP_003063567.1 CDS pyrP NC_012984.1 2107491 2108771 R uracil transport protein complement(2107491..2108771) Lactobacillus plantarum JDM1 8189931 YP_003063568.1 CDS upp NC_012984.1 2109924 2110553 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(2109924..2110553) Lactobacillus plantarum JDM1 8189932 YP_003063569.1 CDS glyA NC_012984.1 2110633 2111871 R glycine hydroxymethyltransferase complement(2110633..2111871) Lactobacillus plantarum JDM1 8189933 YP_003063570.1 CDS JDM1_1986 NC_012984.1 2111930 2112949 R SUA5 family translation factor complement(2111930..2112949) Lactobacillus plantarum JDM1 8189934 YP_003063571.1 CDS hemK NC_012984.1 2113240 2114106 R protoporphyrinogen oxidase complement(2113240..2114106) Lactobacillus plantarum JDM1 8189935 YP_003063572.1 CDS prfA NC_012984.1 2114099 2115181 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(2114099..2115181) Lactobacillus plantarum JDM1 8189936 YP_003063573.1 CDS tdk NC_012984.1 2115283 2115783 R thymidine kinase complement(2115283..2115783) Lactobacillus plantarum JDM1 8189937 YP_003063574.1 CDS JDM1_1990 NC_012984.1 2116036 2117382 D UDP-N-acetylmuramyl tripeptide synthase () 2116036..2117382 Lactobacillus plantarum JDM1 8189938 YP_003063575.1 CDS cobQ NC_012984.1 2117385 2118107 D cobyric acid synthase () 2117385..2118107 Lactobacillus plantarum JDM1 8189939 YP_003063576.1 CDS pmi NC_012984.1 2118370 2119335 R mannose-6-phosphate isomerase complement(2118370..2119335) Lactobacillus plantarum JDM1 8189940 YP_003063577.1 CDS JDM1_1993 NC_012984.1 2119412 2120431 R esterase complement(2119412..2120431) Lactobacillus plantarum JDM1 8189941 YP_003063578.1 CDS JDM1_1994 NC_012984.1 2120602 2120787 R hypothetical protein complement(2120602..2120787) Lactobacillus plantarum JDM1 8189942 YP_003063579.1 CDS bcaT NC_012984.1 2121038 2122066 R catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase complement(2121038..2122066) Lactobacillus plantarum JDM1 8189943 YP_003063580.1 CDS JDM1_1996 NC_012984.1 2122198 2122560 D hypothetical protein 2122198..2122560 Lactobacillus plantarum JDM1 8189944 YP_003063581.1 CDS JDM1_1997 NC_012984.1 2122777 2123748 R lipoprotein precursor complement(2122777..2123748) Lactobacillus plantarum JDM1 8189945 YP_003063582.1 CDS JDM1_1998 NC_012984.1 2123763 2125652 R ABC transporter, ATP-binding and permease protein complement(2123763..2125652) Lactobacillus plantarum JDM1 8189946 YP_003063583.1 CDS JDM1_1999 NC_012984.1 2125652 2127382 R ABC transporter, ATP-binding and permease protein complement(2125652..2127382) Lactobacillus plantarum JDM1 8189947 YP_003063584.1 CDS JDM1_2000 NC_012984.1 2127605 2127997 R hypothetical protein complement(2127605..2127997) Lactobacillus plantarum JDM1 8189948 YP_003063585.1 CDS JDM1_2001 NC_012984.1 2128220 2129071 D prophage Lp2 protein 59; xylanase/chitin deacetylase () 2128220..2129071 Lactobacillus plantarum JDM1 8189949 YP_003063586.1 CDS JDM1_2002 NC_012984.1 2129386 2129592 R prophage Lp3 protein 24 complement(2129386..2129592) Lactobacillus plantarum JDM1 8189951 YP_003063587.1 CDS JDM1_2003 NC_012984.1 2130005 2130238 D hypothetical protein 2130005..2130238 Lactobacillus plantarum JDM1 8189953 YP_003063588.1 CDS JDM1_2004 NC_012984.1 2130263 2130535 D hypothetical protein 2130263..2130535 Lactobacillus plantarum JDM1 8189954 YP_003063589.1 CDS JDM1_2005 NC_012984.1 2130584 2131069 R transcription regulator () complement(2130584..2131069) Lactobacillus plantarum JDM1 8189955 YP_003063590.1 CDS JDM1_2006 NC_012984.1 2131124 2133100 R hypothetical protein complement(2131124..2133100) Lactobacillus plantarum JDM1 8189956 YP_003063591.1 CDS JDM1_2007 NC_012984.1 2133200 2136130 R hypothetical protein complement(2133200..2136130) Lactobacillus plantarum JDM1 8189957 YP_003063592.1 CDS JDM1_2008 NC_012984.1 2136270 2136401 R hypothetical protein complement(2136270..2136401) Lactobacillus plantarum JDM1 8189958 YP_003063593.1 CDS JDM1_2009 NC_012984.1 2137315 2137632 D hypothetical protein 2137315..2137632 Lactobacillus plantarum JDM1 8189959 YP_003063594.1 CDS JDM1_2010 NC_012984.1 2138553 2140316 R ABC transporter, ATP-binding and permease protein complement(2138553..2140316) Lactobacillus plantarum JDM1 8189960 YP_003063595.1 CDS tagE4 NC_012984.1 2140288 2141865 R poly(glycerol-phosphate) alpha-glucosyltransferase complement(2140288..2141865) Lactobacillus plantarum JDM1 8189961 YP_003063596.1 CDS JDM1_2012 NC_012984.1 2141883 2143877 R ABC transporter, ATP-binding and permease protein complement(2141883..2143877) Lactobacillus plantarum JDM1 8189962 YP_003063597.1 CDS JDM1_2013 NC_012984.1 2144282 2144473 R hypothetical protein complement(2144282..2144473) Lactobacillus plantarum JDM1 8189963 YP_003063598.1 CDS pgi NC_012984.1 2144899 2146251 R functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase complement(2144899..2146251) Lactobacillus plantarum JDM1 8189964 YP_003063599.1 CDS JDM1_2015 NC_012984.1 2146472 2147329 R sugar transport protein complement(2146472..2147329) Lactobacillus plantarum JDM1 8189965 YP_003063600.1 CDS JDM1_2016 NC_012984.1 2147564 2148745 R hypothetical protein complement(2147564..2148745) Lactobacillus plantarum JDM1 8189966 YP_003063601.1 CDS hpk7 NC_012984.1 2149041 2150564 R histidine protein kinase; sensor protein complement(2149041..2150564) Lactobacillus plantarum JDM1 8189967 YP_003063602.1 CDS rrp7 NC_012984.1 2150561 2151289 R response regulator complement(2150561..2151289) Lactobacillus plantarum JDM1 8189968 YP_003063603.1 CDS JDM1_2019 NC_012984.1 2151662 2153005 R hypothetical protein complement(2151662..2153005) Lactobacillus plantarum JDM1 8189969 YP_003063604.1 CDS JDM1_2020 NC_012984.1 2153015 2153284 R ACT domain-containing protein; hypothetical protein complement(2153015..2153284) Lactobacillus plantarum JDM1 8189970 YP_003063605.1 CDS JDM1_2021 NC_012984.1 2153481 2154419 D transport protein 2153481..2154419 Lactobacillus plantarum JDM1 8189971 YP_003063606.1 CDS JDM1_2022 NC_012984.1 2154629 2154871 R hypothetical protein complement(2154629..2154871) Lactobacillus plantarum JDM1 8189972 YP_003063607.1 CDS JDM1_2023 NC_012984.1 2155177 2155737 R hypothetical protein complement(2155177..2155737) Lactobacillus plantarum JDM1 8189973 YP_003063608.1 CDS JDM1_2024 NC_012984.1 2155813 2156130 R hypothetical protein complement(2155813..2156130) Lactobacillus plantarum JDM1 8189974 YP_003063609.1 CDS JDM1_2025 NC_012984.1 2156344 2157531 R transport protein complement(2156344..2157531) Lactobacillus plantarum JDM1 8189975 YP_003063610.1 CDS JDM1_2026 NC_012984.1 2157637 2158380 R hypothetical protein complement(2157637..2158380) Lactobacillus plantarum JDM1 8189976 YP_003063611.1 CDS JDM1_2027 NC_012984.1 2158439 2158603 R hypothetical protein complement(2158439..2158603) Lactobacillus plantarum JDM1 8189977 YP_003063612.1 CDS JDM1_2028 NC_012984.1 2159165 2160028 R cell surface hydrolase () complement(2159165..2160028) Lactobacillus plantarum JDM1 8189978 YP_003063613.1 CDS JDM1_2029 NC_012984.1 2160095 2160988 R gamma-D-glutamate-meso-diaminopimelate muropeptidase complement(2160095..2160988) Lactobacillus plantarum JDM1 8189571 YP_003063614.1 CDS JDM1_2030 NC_012984.1 2161210 2161674 D transcription regulator, AsnC-type 2161210..2161674 Lactobacillus plantarum JDM1 8188801 YP_003063615.1 CDS JDM1_2031 NC_012984.1 2161821 2162042 R hypothetical protein complement(2161821..2162042) Lactobacillus plantarum JDM1 8188802 YP_003063616.1 CDS JDM1_2032 NC_012984.1 2162068 2162298 R hypothetical protein complement(2162068..2162298) Lactobacillus plantarum JDM1 8188803 YP_003063617.1 CDS JDM1_2033 NC_012984.1 2162522 2163712 D diguanylate cyclase/phosphodiesterase domain-containing protein 2162522..2163712 Lactobacillus plantarum JDM1 8188804 YP_003063618.1 CDS JDM1_2034 NC_012984.1 2163973 2165526 R ABC transporter ATP-binding protein complement(2163973..2165526) Lactobacillus plantarum JDM1 8188805 YP_003063619.1 CDS JDM1_2035 NC_012984.1 2165611 2166198 R acetyltransferase () complement(2165611..2166198) Lactobacillus plantarum JDM1 8188806 YP_003063620.1 CDS JDM1_2036 NC_012984.1 2167259 2167708 D ring-cleaving dioxygenase () 2167259..2167708 Lactobacillus plantarum JDM1 8188807 YP_003063621.1 CDS JDM1_2037 NC_012984.1 2167795 2168136 R hypothetical protein complement(2167795..2168136) Lactobacillus plantarum JDM1 8188808 YP_003063622.1 CDS pts18CBA NC_012984.1 2168333 2170321 R N-acetylglucosamine and glucose PTS, EIICBA complement(2168333..2170321) Lactobacillus plantarum JDM1 8188809 YP_003063623.1 CDS panE1 NC_012984.1 2170511 2171485 R 2-dehydropantoate 2-reductase complement(2170511..2171485) Lactobacillus plantarum JDM1 8188810 YP_003063624.1 CDS JDM1_2040 NC_012984.1 2172091 2172987 R DegV family protein complement(2172091..2172987) Lactobacillus plantarum JDM1 8188811 YP_003063625.1 CDS hom1 NC_012984.1 2173138 2174418 R homoserine dehydrogenase complement(2173138..2174418) Lactobacillus plantarum JDM1 8188812 YP_003063626.1 CDS metY NC_012984.1 2174469 2175755 R O-acetylhomoserine (thiol)-lyase complement(2174469..2175755) Lactobacillus plantarum JDM1 8188813 YP_003063627.1 CDS metA NC_012984.1 2175758 2176633 R homoserine O-succinyltransferase complement(2175758..2176633) Lactobacillus plantarum JDM1 8188814 YP_003063628.1 CDS JDM1_2044 NC_012984.1 2177685 2177942 R hypothetical protein complement(2177685..2177942) Lactobacillus plantarum JDM1 8188815 YP_003063629.1 CDS JDM1_2045 NC_012984.1 2178056 2179054 D ABC transporter substrate-binding protein 2178056..2179054 Lactobacillus plantarum JDM1 8188816 YP_003063630.1 CDS JDM1_2046 NC_012984.1 2179051 2179959 D ABC transporter permease 2179051..2179959 Lactobacillus plantarum JDM1 8188817 YP_003063631.1 CDS JDM1_2047 NC_012984.1 2179946 2180728 D ABC transporter ATP-binding protein 2179946..2180728 Lactobacillus plantarum JDM1 8188818 YP_003063632.1 CDS npr2 NC_012984.1 2181004 2182359 D NADH peroxidase 2181004..2182359 Lactobacillus plantarum JDM1 8188819 YP_003063633.1 CDS hibD NC_012984.1 2183557 2184417 R 3-hydroxyisobutyrate dehydrogenase complement(2183557..2184417) Lactobacillus plantarum JDM1 8188820 YP_003063634.1 CDS JDM1_2050 NC_012984.1 2184414 2185187 R hypothetical protein complement(2184414..2185187) Lactobacillus plantarum JDM1 8188821 YP_003063635.1 CDS maa1 NC_012984.1 2185363 2185917 R maltose O-acetyltransferase complement(2185363..2185917) Lactobacillus plantarum JDM1 8188822 YP_003063636.1 CDS hisC NC_012984.1 2186103 2187173 R histidinol-phosphate aminotransferase complement(2186103..2187173) Lactobacillus plantarum JDM1 8188823 YP_003063637.1 CDS hisE NC_012984.1 2187185 2187505 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase complement(2187185..2187505) Lactobacillus plantarum JDM1 8188824 YP_003063638.1 CDS hisI NC_012984.1 2187646 2187972 R phosphoribosyl-AMP cyclohydrolase complement(2187646..2187972) Lactobacillus plantarum JDM1 8188825 YP_003063639.1 CDS hisF NC_012984.1 2187969 2188727 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(2187969..2188727) Lactobacillus plantarum JDM1 8188826 YP_003063640.1 CDS hisA NC_012984.1 2188721 2189446 R phosphoribosylformimino-5-aminoimidazole carboxamideribotide isomerase complement(2188721..2189446) Lactobacillus plantarum JDM1 8188827 YP_003063641.1 CDS hisH NC_012984.1 2189421 2190047 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(2189421..2190047) Lactobacillus plantarum JDM1 8188828 YP_003063642.1 CDS hisB NC_012984.1 2190048 2190638 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(2190048..2190638) Lactobacillus plantarum JDM1 8188829 YP_003063643.1 CDS hisD NC_012984.1 2190705 2191991 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(2190705..2191991) Lactobacillus plantarum JDM1 8188830 YP_003063644.1 CDS hisG NC_012984.1 2191991 2192647 R ATP phosphoribosyltransferase complement(2191991..2192647) Lactobacillus plantarum JDM1 8188831 YP_003063645.1 CDS hisX NC_012984.1 2192640 2193791 R histidine-tRNA ligase () complement(2192640..2193791) Lactobacillus plantarum JDM1 8188832 YP_003063646.1 CDS hisK NC_012984.1 2194255 2195091 R catalyzes the formation of L-histidinol from L-histidinol phosphate; histidinol-phosphatase complement(2194255..2195091) Lactobacillus plantarum JDM1 8188833 YP_003063647.1 CDS JDM1_2063 NC_012984.1 2195312 2196475 D hypothetical protein 2195312..2196475 Lactobacillus plantarum JDM1 8188834 YP_003063648.1 CDS JDM1_2064 NC_012984.1 2196559 2197467 D Mg2+ and Co2+ transport protein 2196559..2197467 Lactobacillus plantarum JDM1 8188835 YP_003063649.1 CDS JDM1_2065 NC_012984.1 2197483 2197830 D hypothetical protein 2197483..2197830 Lactobacillus plantarum JDM1 8188836 YP_003063650.1 CDS JDM1_2066 NC_012984.1 2198105 2198314 R hypothetical protein complement(2198105..2198314) Lactobacillus plantarum JDM1 8188837 YP_003063651.1 CDS asd2 NC_012984.1 2198443 2199504 R aspartate-semialdehyde dehydrogenase complement(2198443..2199504) Lactobacillus plantarum JDM1 8188838 YP_003063652.1 CDS bsh4 NC_012984.1 2199735 2200688 D choloylglycine hydrolase 2199735..2200688 Lactobacillus plantarum JDM1 8188839 YP_003063653.1 CDS JDM1_2069 NC_012984.1 2200737 2200955 R hypothetical protein complement(2200737..2200955) Lactobacillus plantarum JDM1 8188840 YP_003063654.1 CDS JDM1_2070 NC_012984.1 2200955 2201758 R hypothetical protein complement(2200955..2201758) Lactobacillus plantarum JDM1 8188841 YP_003063655.1 CDS JDM1_2071 NC_012984.1 2201791 2204421 D hypothetical protein 2201791..2204421 Lactobacillus plantarum JDM1 8188842 YP_003063656.1 CDS JDM1_2072 NC_012984.1 2204883 2206958 R cell surface protein precursor complement(2204883..2206958) Lactobacillus plantarum JDM1 8188843 YP_003063657.1 CDS JDM1_2073 NC_012984.1 2207321 2207806 R acetyltransferase () complement(2207321..2207806) Lactobacillus plantarum JDM1 8188844 YP_003063658.1 CDS JDM1_2074 NC_012984.1 2208090 2210102 D alkaline phosphatase 2208090..2210102 Lactobacillus plantarum JDM1 8188845 YP_003063659.1 CDS glpQ4 NC_012984.1 2210618 2212276 D glycerophosphodiester phosphodiesterase 2210618..2212276 Lactobacillus plantarum JDM1 8188846 YP_003063660.1 CDS trxB2 NC_012984.1 2213380 2214375 R thioredoxin reductase complement(2213380..2214375) Lactobacillus plantarum JDM1 8188847 YP_003063661.1 CDS JDM1_2077 NC_012984.1 2214496 2215260 D cell surface hydrolase, membrane-bound () 2214496..2215260 Lactobacillus plantarum JDM1 8188848 YP_003063662.1 CDS JDM1_2078 NC_012984.1 2215533 2217053 D cell surface protein precursor 2215533..2217053 Lactobacillus plantarum JDM1 8188849 YP_003063663.1 CDS JDM1_2079 NC_012984.1 2217176 2218060 R hypothetical protein complement(2217176..2218060) Lactobacillus plantarum JDM1 8188850 YP_003063664.1 CDS JDM1_2080 NC_012984.1 2218081 2218641 R nitroreductase complement(2218081..2218641) Lactobacillus plantarum JDM1 8188851 YP_003063665.1 CDS JDM1_2081 NC_012984.1 2218841 2219797 D purine nucleosidase 2218841..2219797 Lactobacillus plantarum JDM1 8188852 YP_003063666.1 CDS rnh NC_012984.1 2219945 2220829 D ribonuclease H () 2219945..2220829 Lactobacillus plantarum JDM1 8188853 YP_003063667.1 CDS JDM1_2083 NC_012984.1 2221157 2222005 R sugar transport protein complement(2221157..2222005) Lactobacillus plantarum JDM1 8188854 YP_003063668.1 CDS JDM1_2084 NC_012984.1 2222009 2222872 R sugar kinase and transcription regulator complement(2222009..2222872) Lactobacillus plantarum JDM1 8188855 YP_003063669.1 CDS pflA1 NC_012984.1 2223307 2224110 R formate acetyltransferase activating enzyme complement(2223307..2224110) Lactobacillus plantarum JDM1 8188856 YP_003063670.1 CDS JDM1_2086 NC_012984.1 2224247 2225002 D transcription regulator 2224247..2225002 Lactobacillus plantarum JDM1 8188857 YP_003063671.1 CDS pflB1 NC_012984.1 2225225 2227669 D formate C-acetyltransferase 2225225..2227669 Lactobacillus plantarum JDM1 8188858 YP_003063672.1 CDS JDM1_2088 NC_012984.1 2228302 2229252 D transcription regulator 2228302..2229252 Lactobacillus plantarum JDM1 8188859 YP_003063673.1 CDS tal1 NC_012984.1 2229394 2230107 D similar to transaldolase from Escherichia coli; many organisms have multiple copies; fructose-6-phosphate aldolase 2229394..2230107 Lactobacillus plantarum JDM1 8188860 YP_003063674.1 CDS JDM1_2090 NC_012984.1 2230355 2231125 R HAD superfamily hydrolase complement(2230355..2231125) Lactobacillus plantarum JDM1 8188861 YP_003063675.1 CDS ccpB NC_012984.1 2231141 2232079 R catabolite control protein B complement(2231141..2232079) Lactobacillus plantarum JDM1 8188862 YP_003063676.1 CDS JDM1_2092 NC_012984.1 2232254 2232568 D transcription regulator 2232254..2232568 Lactobacillus plantarum JDM1 8188863 YP_003063677.1 CDS JDM1_2093 NC_012984.1 2232658 2233116 D transcription regulator 2232658..2233116 Lactobacillus plantarum JDM1 8188864 YP_003063678.1 CDS JDM1_2094 NC_012984.1 2233246 2234226 R oxidoreductase complement(2233246..2234226) Lactobacillus plantarum JDM1 8188865 YP_003063679.1 CDS JDM1_2095 NC_012984.1 2234449 2235468 R oxidoreductase complement(2234449..2235468) Lactobacillus plantarum JDM1 8188866 YP_003063680.1 CDS JDM1_2096 NC_012984.1 2235690 2237693 D Na(+)/H(+) antiporter 2235690..2237693 Lactobacillus plantarum JDM1 8188867 YP_003063681.1 CDS dxs NC_012984.1 2237963 2239714 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 2237963..2239714 Lactobacillus plantarum JDM1 8188868 YP_003063682.1 CDS JDM1_2098 NC_012984.1 2240151 2240705 D pyrazinamidase/nicotinamidase 2240151..2240705 Lactobacillus plantarum JDM1 8188869 YP_003063683.1 CDS JDM1_2099 NC_012984.1 2240766 2241539 R ABC transporter permease complement(2240766..2241539) Lactobacillus plantarum JDM1 8188870 YP_003063684.1 CDS JDM1_2100 NC_012984.1 2241529 2242239 R ABC transporter ATP-binding protein complement(2241529..2242239) Lactobacillus plantarum JDM1 8188871 YP_003063685.1 CDS JDM1_2101 NC_012984.1 2242220 2242609 R transcription regulator complement(2242220..2242609) Lactobacillus plantarum JDM1 8188872 YP_003063686.1 CDS JDM1_2102 NC_012984.1 2242797 2243078 D hypothetical protein 2242797..2243078 Lactobacillus plantarum JDM1 8188873 YP_003063687.1 CDS JDM1_2103 NC_012984.1 2243921 2244844 R cell surface hydrolase, membrane-bound () complement(2243921..2244844) Lactobacillus plantarum JDM1 8188874 YP_003063688.1 CDS pepF2 NC_012984.1 2244961 2246760 D oligoendopeptidase F 2244961..2246760 Lactobacillus plantarum JDM1 8188875 YP_003063689.1 CDS JDM1_2105 NC_012984.1 2246778 2247194 D transcription regulator 2246778..2247194 Lactobacillus plantarum JDM1 8188876 YP_003063690.1 CDS JDM1_2106 NC_012984.1 2247204 2248055 D hypothetical protein 2247204..2248055 Lactobacillus plantarum JDM1 8188877 YP_003063691.1 CDS JDM1_2107 NC_012984.1 2248182 2248538 R hypothetical protein complement(2248182..2248538) Lactobacillus plantarum JDM1 8188878 YP_003063692.1 CDS JDM1_2108 NC_012984.1 2248553 2248867 R acetyltransferase () complement(2248553..2248867) Lactobacillus plantarum JDM1 8188879 YP_003063693.1 CDS pox3 NC_012984.1 2249766 2251523 R pyruvate oxidase complement(2249766..2251523) Lactobacillus plantarum JDM1 8190322 YP_003063694.1 CDS JDM1_2110 NC_012984.1 2251756 2252151 D hypothetical protein 2251756..2252151 Lactobacillus plantarum JDM1 8190323 YP_003063695.1 CDS JDM1_2111 NC_012984.1 2252210 2252968 R lipase/esterase complement(2252210..2252968) Lactobacillus plantarum JDM1 8190324 YP_003063696.1 CDS trxH NC_012984.1 2253159 2253479 R thioredoxin complement(2253159..2253479) Lactobacillus plantarum JDM1 8190325 YP_003063697.1 CDS metB NC_012984.1 2253551 2254672 R O-succinylhomoserine (thiol)-lyase complement(2253551..2254672) Lactobacillus plantarum JDM1 8190326 YP_003063698.1 CDS JDM1_2114 NC_012984.1 2255120 2255434 R hypothetical protein complement(2255120..2255434) Lactobacillus plantarum JDM1 8190327 YP_003063699.1 CDS JDM1_2115 NC_012984.1 2255701 2256372 R hypothetical protein complement(2255701..2256372) Lactobacillus plantarum JDM1 8190328 YP_003063700.1 CDS JDM1_2116 NC_012984.1 2256804 2257310 D hypothetical protein 2256804..2257310 Lactobacillus plantarum JDM1 8190329 YP_003063701.1 CDS JDM1_2117 NC_012984.1 2257901 2258350 R hypothetical protein complement(2257901..2258350) Lactobacillus plantarum JDM1 8190330 YP_003063702.1 CDS JDM1_2118 NC_012984.1 2258384 2258788 R hypothetical protein complement(2258384..2258788) Lactobacillus plantarum JDM1 8190331 YP_003063703.1 CDS lplA1 NC_012984.1 2258778 2259791 R lipoate-protein ligase complement(2258778..2259791) Lactobacillus plantarum JDM1 8190332 YP_003063704.1 CDS JDM1_2120 NC_012984.1 2259823 2259933 R hypothetical protein complement(2259823..2259933) Lactobacillus plantarum JDM1 8190333 YP_003063705.1 CDS acm2 NC_012984.1 2260293 2262650 R muramidase complement(2260293..2262650) Lactobacillus plantarum JDM1 8190334 YP_003063706.1 CDS pts19A NC_012984.1 2263130 2263552 R N-acetylglucosamine/galactosamine PTS, EIIA complement(2263130..2263552) Lactobacillus plantarum JDM1 8190335 YP_003063707.1 CDS pts19D NC_012984.1 2263554 2264369 R catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N-acetylgalactosamine transport; PTS system N-acetylgalactosamine-specific transporter subunit IID complement(2263554..2264369) Lactobacillus plantarum JDM1 8190336 YP_003063708.1 CDS pts19C NC_012984.1 2264359 2265168 R N-acetylgalactosamine PTS, EIIC complement(2264359..2265168) Lactobacillus plantarum JDM1 8190337 YP_003063709.1 CDS pts19B NC_012984.1 2265169 2265651 R catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; involved in N-acetylgalactosamine transport; PTS system N-acetylgalactosamine-specific transporter subunit IIB complement(2265169..2265651) Lactobacillus plantarum JDM1 8190338 YP_003063710.1 CDS JDM1_2126 NC_012984.1 2265682 2266395 R transcription regulator complement(2265682..2266395) Lactobacillus plantarum JDM1 8190339 YP_003063711.1 CDS JDM1_2127 NC_012984.1 2267105 2267566 D hypothetical protein 2267105..2267566 Lactobacillus plantarum JDM1 8190340 YP_003063712.1 CDS rluA NC_012984.1 2267652 2268554 D pseudouridylate synthase 2267652..2268554 Lactobacillus plantarum JDM1 8190341 YP_003063713.1 CDS JDM1_2129 NC_012984.1 2268632 2268952 D transcription regulator 2268632..2268952 Lactobacillus plantarum JDM1 8190342 YP_003063714.1 CDS JDM1_2130 NC_012984.1 2269115 2269312 R hypothetical protein complement(2269115..2269312) Lactobacillus plantarum JDM1 8190343 YP_003063715.1 CDS JDM1_2131 NC_012984.1 2269522 2270730 R glycosyltransferase () complement(2269522..2270730) Lactobacillus plantarum JDM1 8190344 YP_003063716.1 CDS xpk1 NC_012984.1 2271137 2273503 R phosphoketolase complement(2271137..2273503) Lactobacillus plantarum JDM1 8190345 YP_003063717.1 CDS est1 NC_012984.1 2273733 2274581 R acetylesterase complement(2273733..2274581) Lactobacillus plantarum JDM1 8190346 YP_003063718.1 CDS JDM1_2134 NC_012984.1 2274596 2275321 R transcription regulator complement(2274596..2275321) Lactobacillus plantarum JDM1 8190347 YP_003063719.1 CDS JDM1_2135 NC_012984.1 2275446 2275949 D transcription regulator () 2275446..2275949 Lactobacillus plantarum JDM1 8190348 YP_003063720.1 CDS JDM1_2136 NC_012984.1 2275954 2276733 D hypothetical protein 2275954..2276733 Lactobacillus plantarum JDM1 8190349 YP_003063721.1 CDS JDM1_2137 NC_012984.1 2276906 2277562 R hypothetical protein complement(2276906..2277562) Lactobacillus plantarum JDM1 8190350 YP_003063722.1 CDS rrp8 NC_012984.1 2277572 2278321 R response regulator complement(2277572..2278321) Lactobacillus plantarum JDM1 8190351 YP_003063723.1 CDS JDM1_2139 NC_012984.1 2278498 2279022 R hypothetical protein complement(2278498..2279022) Lactobacillus plantarum JDM1 8190352 YP_003063724.1 CDS JDM1_2140 NC_012984.1 2279140 2279535 D hypothetical protein 2279140..2279535 Lactobacillus plantarum JDM1 8190353 YP_003063725.1 CDS hsp2 NC_012984.1 2279806 2280225 R small heat shock protein complement(2279806..2280225) Lactobacillus plantarum JDM1 8190354 YP_003063726.1 CDS JDM1_2142 NC_012984.1 2280254 2280595 R hypothetical protein complement(2280254..2280595) Lactobacillus plantarum JDM1 8190355 YP_003063727.1 CDS JDM1_2143 NC_012984.1 2280833 2282200 D hypothetical protein 2280833..2282200 Lactobacillus plantarum JDM1 8190356 YP_003063728.1 CDS nrdI NC_012984.1 2282508 2282993 D has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; flavoprotein NrdI 2282508..2282993 Lactobacillus plantarum JDM1 8190357 YP_003063729.1 CDS JDM1_2145 NC_012984.1 2283101 2284687 R Na(+)/H(+) antiporter complement(2283101..2284687) Lactobacillus plantarum JDM1 8190358 YP_003063730.1 CDS JDM1_2146 NC_012984.1 2284851 2286014 R major facilitator superfamily multidrug transporter complement(2284851..2286014) Lactobacillus plantarum JDM1 8190359 YP_003063731.1 CDS JDM1_2147 NC_012984.1 2286345 2286722 D transcription regulator 2286345..2286722 Lactobacillus plantarum JDM1 8190360 YP_003063732.1 CDS JDM1_2148 NC_012984.1 2286808 2287752 D oxidoreductase 2286808..2287752 Lactobacillus plantarum JDM1 8190361 YP_003063733.1 CDS JDM1_2149 NC_012984.1 2288160 2288507 D hypothetical protein 2288160..2288507 Lactobacillus plantarum JDM1 8190362 YP_003063734.1 CDS gpd NC_012984.1 2288625 2290109 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 2288625..2290109 Lactobacillus plantarum JDM1 8190363 YP_003063735.1 CDS JDM1_2151 NC_012984.1 2290333 2291697 R aminotransferase complement(2290333..2291697) Lactobacillus plantarum JDM1 8190364 YP_003063736.1 CDS araT2 NC_012984.1 2291795 2292967 D aromatic amino acid specific aminotransferase 2291795..2292967 Lactobacillus plantarum JDM1 8190365 YP_003063737.1 CDS dapA2 NC_012984.1 2292972 2293841 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 2292972..2293841 Lactobacillus plantarum JDM1 8190366 YP_003063738.1 CDS JDM1_2154 NC_012984.1 2293951 2294046 D hypothetical protein 2293951..2294046 Lactobacillus plantarum JDM1 8190367 YP_003063739.1 CDS JDM1_2155 NC_012984.1 2294291 2295064 R transport protein complement(2294291..2295064) Lactobacillus plantarum JDM1 8190368 YP_003063740.1 CDS JDM1_2156 NC_012984.1 2295191 2296087 D transcription regulator 2295191..2296087 Lactobacillus plantarum JDM1 8190369 YP_003063741.1 CDS JDM1_2157 NC_012984.1 2296246 2296896 R hypothetical protein complement(2296246..2296896) Lactobacillus plantarum JDM1 8190370 YP_003063742.1 CDS JDM1_2158 NC_012984.1 2297024 2297548 D acetyltransferase () 2297024..2297548 Lactobacillus plantarum JDM1 8190371 YP_003063743.1 CDS rexA NC_012984.1 2297681 2301430 R ATP-dependent nuclease, subunit A complement(2297681..2301430) Lactobacillus plantarum JDM1 8190372 YP_003063744.1 CDS rexB NC_012984.1 2301423 2305028 R ATP-dependent nuclease, subunit B complement(2301423..2305028) Lactobacillus plantarum JDM1 8190373 YP_003063745.1 CDS JDM1_2161 NC_012984.1 2305423 2306526 R hypothetical protein complement(2305423..2306526) Lactobacillus plantarum JDM1 8190374 YP_003063746.1 CDS pyrE NC_012984.1 2306542 2307180 R orotate phosphoribosyltransferase complement(2306542..2307180) Lactobacillus plantarum JDM1 8190375 YP_003063747.1 CDS pyrF NC_012984.1 2307182 2307895 R type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(2307182..2307895) Lactobacillus plantarum JDM1 8190376 YP_003063748.1 CDS pyrD NC_012984.1 2307892 2308809 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B complement(2307892..2308809) Lactobacillus plantarum JDM1 8190377 YP_003063749.1 CDS carB NC_012984.1 2308852 2312028 R four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit complement(2308852..2312028) Lactobacillus plantarum JDM1 8190378 YP_003063750.1 CDS pyrAA NC_012984.1 2312021 2313115 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(2312021..2313115) Lactobacillus plantarum JDM1 8190379 YP_003063751.1 CDS pyrC NC_012984.1 2313112 2314404 R catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase complement(2313112..2314404) Lactobacillus plantarum JDM1 8190380 YP_003063752.1 CDS pyrB NC_012984.1 2314408 2315343 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase complement(2314408..2315343) Lactobacillus plantarum JDM1 8190381 YP_003063753.1 CDS pyrR1 NC_012984.1 2315490 2316032 R regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase complement(2315490..2316032) Lactobacillus plantarum JDM1 8190382 YP_003063754.1 CDS pucR NC_012984.1 2316984 2318573 D purine transport regulator 2316984..2318573 Lactobacillus plantarum JDM1 8190383 YP_003063755.1 CDS pucK NC_012984.1 2318833 2320173 D xanthine / uracil transport protein 2318833..2320173 Lactobacillus plantarum JDM1 8190384 YP_003063756.1 CDS JDM1_2172 NC_012984.1 2320519 2321826 D transport protein 2320519..2321826 Lactobacillus plantarum JDM1 8190385 YP_003063757.1 CDS JDM1_2173 NC_012984.1 2321925 2322875 R hypothetical protein complement(2321925..2322875) Lactobacillus plantarum JDM1 8190386 YP_003063758.1 CDS JDM1_2174 NC_012984.1 2323138 2323962 D diguanylate cyclase/phosphodiesterase domain-containing protein 2323138..2323962 Lactobacillus plantarum JDM1 8190387 YP_003063759.1 CDS JDM1_2175 NC_012984.1 2323955 2324473 D hypothetical protein 2323955..2324473 Lactobacillus plantarum JDM1 8190388 YP_003063760.1 CDS ica3 NC_012984.1 2324486 2325814 D glycosyltransferase () 2324486..2325814 Lactobacillus plantarum JDM1 8189359 YP_003063761.1 CDS JDM1_2177 NC_012984.1 2326004 2326672 R hypothetical protein complement(2326004..2326672) Lactobacillus plantarum JDM1 8189442 YP_003063762.1 CDS purD NC_012984.1 2326851 2328092 R phosphoribosylamine--glycine ligase complement(2326851..2328092) Lactobacillus plantarum JDM1 8189443 YP_003063763.1 CDS purH NC_012984.1 2328112 2329644 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(2328112..2329644) Lactobacillus plantarum JDM1 8189444 YP_003063764.1 CDS purN NC_012984.1 2329646 2330224 R phosphoribosylglycinamide formyltransferase complement(2329646..2330224) Lactobacillus plantarum JDM1 8189445 YP_003063765.1 CDS purM NC_012984.1 2330217 2331242 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(2330217..2331242) Lactobacillus plantarum JDM1 8189446 YP_003063766.1 CDS purF NC_012984.1 2331239 2332693 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(2331239..2332693) Lactobacillus plantarum JDM1 8189447 YP_003063767.1 CDS purL NC_012984.1 2332678 2334897 R phosphoribosylformylglycinamidine synthase II complement(2332678..2334897) Lactobacillus plantarum JDM1 8189448 YP_003063768.1 CDS purQ NC_012984.1 2334890 2335570 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I complement(2334890..2335570) Lactobacillus plantarum JDM1 8189449 YP_003063769.1 CDS purS NC_012984.1 2335570 2335824 R purine biosynthesis cluster protein complement(2335570..2335824) Lactobacillus plantarum JDM1 8189450 YP_003063770.1 CDS purC NC_012984.1 2335826 2336557 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(2335826..2336557) Lactobacillus plantarum JDM1 8189451 YP_003063771.1 CDS purK1 NC_012984.1 2336560 2337690 R With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(2336560..2337690) Lactobacillus plantarum JDM1 8189452 YP_003063772.1 CDS purE NC_012984.1 2337674 2338159 R phosphoribosylaminoimidazole carboxylase, catalytic subunit complement(2337674..2338159) Lactobacillus plantarum JDM1 8189453 YP_003063773.1 CDS JDM1_2189 NC_012984.1 2338726 2340021 R oxidoreductase () complement(2338726..2340021) Lactobacillus plantarum JDM1 8189454 YP_003063774.1 CDS JDM1_2190 NC_012984.1 2340036 2340644 R oxidoreductase () complement(2340036..2340644) Lactobacillus plantarum JDM1 8189455 YP_003063775.1 CDS lplA2 NC_012984.1 2340875 2341885 R lipoate-protein ligase complement(2340875..2341885) Lactobacillus plantarum JDM1 8189456 YP_003063776.1 CDS ptp3 NC_012984.1 2341897 2342700 R protein-tyrosine-phosphatase complement(2341897..2342700) Lactobacillus plantarum JDM1 8189457 YP_003063777.1 CDS cah NC_012984.1 2342986 2343621 D carbonate dehydratase 2342986..2343621 Lactobacillus plantarum JDM1 8189458 YP_003063778.1 CDS JDM1_2194 NC_012984.1 2343644 2344453 D cell surface hydrolase, membrane-bound () 2343644..2344453 Lactobacillus plantarum JDM1 8189459 YP_003063779.1 CDS JDM1_2195 NC_012984.1 2344631 2345605 R L-asparaginase complement(2344631..2345605) Lactobacillus plantarum JDM1 8189460 YP_003063780.1 CDS JDM1_2196 NC_012984.1 2346107 2346865 D ABC transporter ATP-binding protein 2346107..2346865 Lactobacillus plantarum JDM1 8189461 YP_003063781.1 CDS JDM1_2197 NC_012984.1 2346896 2348677 D ABC transporter permease 2346896..2348677 Lactobacillus plantarum JDM1 8189462 YP_003063782.1 CDS JDM1_2198 NC_012984.1 2348700 2348975 D hypothetical protein 2348700..2348975 Lactobacillus plantarum JDM1 8189463 YP_003063783.1 CDS JDM1_2199 NC_012984.1 2349003 2349374 D transcription regulator 2349003..2349374 Lactobacillus plantarum JDM1 8189464 YP_003063784.1 CDS JDM1_2200 NC_012984.1 2349371 2350249 D ABC transporter ATP-binding protein 2349371..2350249 Lactobacillus plantarum JDM1 8189465 YP_003063785.1 CDS JDM1_2201 NC_012984.1 2350239 2351048 D ABC transporter permease 2350239..2351048 Lactobacillus plantarum JDM1 8189466 YP_003063786.1 CDS JDM1_2202 NC_012984.1 2351164 2351634 R hypothetical protein complement(2351164..2351634) Lactobacillus plantarum JDM1 8189467 YP_003063787.1 CDS JDM1_2203 NC_012984.1 2351839 2352075 D hypothetical protein 2351839..2352075 Lactobacillus plantarum JDM1 8189468 YP_003063788.1 CDS gtcA2 NC_012984.1 2352153 2352569 D teichoic acid glycosylation protein 2352153..2352569 Lactobacillus plantarum JDM1 8189469 YP_003063789.1 CDS JDM1_2205 NC_012984.1 2352709 2353182 R hypothetical protein complement(2352709..2353182) Lactobacillus plantarum JDM1 8189470 YP_003063790.1 CDS JDM1_2206 NC_012984.1 2353359 2353685 D hypothetical protein 2353359..2353685 Lactobacillus plantarum JDM1 8189471 YP_003063791.1 CDS JDM1_2207 NC_012984.1 2354054 2355250 R aminotransferase complement(2354054..2355250) Lactobacillus plantarum JDM1 8189472 YP_003063792.1 CDS JDM1_2208 NC_012984.1 2355578 2356081 R hypothetical protein complement(2355578..2356081) Lactobacillus plantarum JDM1 8189473 YP_003063793.1 CDS JDM1_2209 NC_012984.1 2356286 2356924 R hypothetical protein complement(2356286..2356924) Lactobacillus plantarum JDM1 8189474 YP_003063794.1 CDS JDM1_2210 NC_012984.1 2357117 2357434 D hypothetical protein 2357117..2357434 Lactobacillus plantarum JDM1 8189475 YP_003063795.1 CDS JDM1_2211 NC_012984.1 2357702 2359426 R glucan 1,4-alpha-maltohydrolase complement(2357702..2359426) Lactobacillus plantarum JDM1 8189476 YP_003063796.1 CDS thrC NC_012984.1 2359570 2361063 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 2359570..2361063 Lactobacillus plantarum JDM1 8189477 YP_003063797.1 CDS JDM1_2213 NC_012984.1 2361078 2361875 D HAD superfamily hydrolase 2361078..2361875 Lactobacillus plantarum JDM1 8189478 YP_003063798.1 CDS JDM1_2214 NC_012984.1 2361947 2362582 D hypothetical protein 2361947..2362582 Lactobacillus plantarum JDM1 8189479 YP_003063799.1 CDS JDM1_2215 NC_012984.1 2362762 2363364 R O-acetyltransferase complement(2362762..2363364) Lactobacillus plantarum JDM1 8189480 YP_003063800.1 CDS JDM1_2216 NC_012984.1 2363379 2363945 R ADP-ribose pyrophosphatase complement(2363379..2363945) Lactobacillus plantarum JDM1 8189481 YP_003063801.1 CDS JDM1_2217 NC_012984.1 2363961 2364329 R cell-cycle regulation histidine triad protein complement(2363961..2364329) Lactobacillus plantarum JDM1 8189482 YP_003063802.1 CDS fabG NC_012984.1 2364345 2365091 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(2364345..2365091) Lactobacillus plantarum JDM1 8189483 YP_003063803.1 CDS JDM1_2219 NC_012984.1 2365091 2365417 R hypothetical protein complement(2365091..2365417) Lactobacillus plantarum JDM1 8189484 YP_003063804.1 CDS JDM1_2220 NC_012984.1 2365477 2366568 D hypothetical protein 2365477..2366568 Lactobacillus plantarum JDM1 8189485 YP_003063805.1 CDS JDM1_2221 NC_012984.1 2366596 2367777 D acetyltransferase () 2366596..2367777 Lactobacillus plantarum JDM1 8189486 YP_003063806.1 CDS JDM1_2222 NC_012984.1 2368667 2369971 D transport protein 2368667..2369971 Lactobacillus plantarum JDM1 8189487 YP_003063807.1 CDS JDM1_2223 NC_012984.1 2370352 2370861 R hypothetical protein complement(2370352..2370861) Lactobacillus plantarum JDM1 8189488 YP_003063808.1 CDS natC2 NC_012984.1 2371007 2372440 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 2371007..2372440 Lactobacillus plantarum JDM1 8189489 YP_003063809.1 CDS JDM1_2225 NC_012984.1 2372542 2373213 R transcription regulator () complement(2372542..2373213) Lactobacillus plantarum JDM1 8189490 YP_003063810.1 CDS JDM1_2226 NC_012984.1 2373218 2374429 R ABC transporter permease complement(2373218..2374429) Lactobacillus plantarum JDM1 8189491 YP_003063811.1 CDS JDM1_2227 NC_012984.1 2374446 2375189 R ABC transporter ATP-binding protein complement(2374446..2375189) Lactobacillus plantarum JDM1 8189492 YP_003063812.1 CDS dsdA NC_012984.1 2375409 2376719 R catalyzes the formation of pyruvate from serine; D-serine dehydratase complement(2375409..2376719) Lactobacillus plantarum JDM1 8189493 YP_003063813.1 CDS pbg4 NC_012984.1 2377229 2378671 R 6-phospho-beta-glucosidase complement(2377229..2378671) Lactobacillus plantarum JDM1 8189494 YP_003063814.1 CDS pbg5 NC_012984.1 2378689 2380128 R 6-phospho-beta-glucosidase complement(2378689..2380128) Lactobacillus plantarum JDM1 8189495 YP_003063815.1 CDS pts20A NC_012984.1 2380322 2380669 R cellobiose PTS, EIIA complement(2380322..2380669) Lactobacillus plantarum JDM1 8189496 YP_003063816.1 CDS pts20B NC_012984.1 2380770 2381087 R cellobiose PTS, EIIB complement(2380770..2381087) Lactobacillus plantarum JDM1 8189497 YP_003063817.1 CDS JDM1_2233 NC_012984.1 2381282 2381989 D transcription regulator 2381282..2381989 Lactobacillus plantarum JDM1 8189498 YP_003063818.1 CDS JDM1_2234 NC_012984.1 2382082 2382816 D glycosyltransferase 2382082..2382816 Lactobacillus plantarum JDM1 8189499 YP_003063819.1 CDS pgm7 NC_012984.1 2383119 2383811 D phosphoglycerate mutase 2383119..2383811 Lactobacillus plantarum JDM1 8189500 YP_003063820.1 CDS JDM1_2235 NC_012984.1 2383795 2384283 R hypothetical protein complement(2383795..2384283) Lactobacillus plantarum JDM1 8189502 YP_003063821.1 CDS JDM1_2237 NC_012984.1 2384471 2385304 R HAD superfamily hydrolase complement(2384471..2385304) Lactobacillus plantarum JDM1 8189501 YP_003063822.1 CDS panE2 NC_012984.1 2386074 2387093 D 2-dehydropantoate 2-reductase 2386074..2387093 Lactobacillus plantarum JDM1 8189503 YP_003063823.1 CDS JDM1_2239 NC_012984.1 2387166 2388092 D transport protein 2387166..2388092 Lactobacillus plantarum JDM1 8189504 YP_003063824.1 CDS serA3 NC_012984.1 2388190 2389140 R phosphoglycerate dehydrogenase complement(2388190..2389140) Lactobacillus plantarum JDM1 8189505 YP_003063825.1 CDS JDM1_2241 NC_012984.1 2389416 2389988 R oxidoreductase complement(2389416..2389988) Lactobacillus plantarum JDM1 8189506 YP_003063826.1 CDS JDM1_2242 NC_012984.1 2390320 2392473 R hypothetical protein complement(2390320..2392473) Lactobacillus plantarum JDM1 8189507 YP_003063827.1 CDS JDM1_2243 NC_012984.1 2392700 2393146 D flavodoxin 2392700..2393146 Lactobacillus plantarum JDM1 8189508 YP_003063828.1 CDS JDM1_2244 NC_012984.1 2393318 2396437 R cell surface protein precursor complement(2393318..2396437) Lactobacillus plantarum JDM1 8189509 YP_003063829.1 CDS JDM1_2245 NC_012984.1 2396460 2399414 R cell surface protein precursor complement(2396460..2399414) Lactobacillus plantarum JDM1 8189510 YP_003063830.1 CDS JDM1_2246 NC_012984.1 2399972 2400202 R hypothetical protein complement(2399972..2400202) Lactobacillus plantarum JDM1 8189511 YP_003063831.1 CDS aroC1 NC_012984.1 2400199 2400948 R 3-dehydroquinate dehydratase complement(2400199..2400948) Lactobacillus plantarum JDM1 8189512 YP_003063832.1 CDS JDM1_2248 NC_012984.1 2401165 2402601 D amino acid transport protein 2401165..2402601 Lactobacillus plantarum JDM1 8189513 YP_003063833.1 CDS JDM1_2249 NC_012984.1 2402892 2403347 D transcription regulator 2402892..2403347 Lactobacillus plantarum JDM1 8189514 YP_003063834.1 CDS JDM1_2250 NC_012984.1 2403577 2404443 R oxidoreductase complement(2403577..2404443) Lactobacillus plantarum JDM1 8189515 YP_003063835.1 CDS JDM1_2251 NC_012984.1 2404462 2405328 R oxidoreductase complement(2404462..2405328) Lactobacillus plantarum JDM1 8189516 YP_003063836.1 CDS JDM1_2252 NC_012984.1 2405447 2406346 D transcription regulator 2405447..2406346 Lactobacillus plantarum JDM1 8189517 YP_003063837.1 CDS JDM1_2253 NC_012984.1 2412272 2412787 R hypothetical protein complement(2412272..2412787) Lactobacillus plantarum JDM1 8189522 YP_003063838.1 CDS tyrS NC_012984.1 2412922 2414178 R tyrosine--tRNA ligase complement(2412922..2414178) Lactobacillus plantarum JDM1 8189360 YP_003063839.1 CDS JDM1_2255 NC_012984.1 2414603 2415220 R hypothetical protein complement(2414603..2415220) Lactobacillus plantarum JDM1 8189361 YP_003063840.1 CDS JDM1_2256 NC_012984.1 2415368 2416666 R lysin complement(2415368..2416666) Lactobacillus plantarum JDM1 8189362 YP_003063841.1 CDS JDM1_2257 NC_012984.1 2417140 2417910 R hypothetical protein complement(2417140..2417910) Lactobacillus plantarum JDM1 8189363 YP_003063842.1 CDS JDM1_2258 NC_012984.1 2418496 2418999 D hypothetical protein 2418496..2418999 Lactobacillus plantarum JDM1 8189364 YP_003063843.1 CDS JDM1_2259 NC_012984.1 2419126 2419479 D hypothetical protein 2419126..2419479 Lactobacillus plantarum JDM1 8189365 YP_003063844.1 CDS JDM1_2260 NC_012984.1 2419957 2420634 R transport protein complement(2419957..2420634) Lactobacillus plantarum JDM1 8189366 YP_003063845.1 CDS JDM1_2261 NC_012984.1 2420730 2421545 R transcription regulator of multidrug-efflux transporter complement(2420730..2421545) Lactobacillus plantarum JDM1 8189367 YP_003063846.1 CDS JDM1_2262 NC_012984.1 2421741 2423039 R proton/sodium-glutamate symport protein complement(2421741..2423039) Lactobacillus plantarum JDM1 8189368 YP_003063847.1 CDS JDM1_2263 NC_012984.1 2423423 2423926 R hypothetical protein complement(2423423..2423926) Lactobacillus plantarum JDM1 8189369 YP_003063848.1 CDS JDM1_2264 NC_012984.1 2424099 2425166 D ABC transporter permease 2424099..2425166 Lactobacillus plantarum JDM1 8189370 YP_003063849.1 CDS JDM1_2265 NC_012984.1 2425181 2425861 D ABC transporter ATP-binding protein 2425181..2425861 Lactobacillus plantarum JDM1 8189371 YP_003063850.1 CDS JDM1_2266 NC_012984.1 2426089 2426640 R hypothetical protein complement(2426089..2426640) Lactobacillus plantarum JDM1 8189372 YP_003063851.1 CDS JDM1_2267 NC_012984.1 2426637 2427617 R purine nucleosidase complement(2426637..2427617) Lactobacillus plantarum JDM1 8189373 YP_003063852.1 CDS JDM1_2268 NC_012984.1 2428040 2428579 D reductase () 2428040..2428579 Lactobacillus plantarum JDM1 8189374 YP_003063853.1 CDS napA3 NC_012984.1 2428643 2429809 R Na(+)/H(+) antiporter complement(2428643..2429809) Lactobacillus plantarum JDM1 8189375 YP_003063854.1 CDS JDM1_2270 NC_012984.1 2430188 2430682 D hypothetical protein 2430188..2430682 Lactobacillus plantarum JDM1 8189376 YP_003063855.1 CDS mleP3 NC_012984.1 2430751 2431677 D malate transport protein () 2430751..2431677 Lactobacillus plantarum JDM1 8189377 YP_003063856.1 CDS aspA NC_012984.1 2431940 2433340 R catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase complement(2431940..2433340) Lactobacillus plantarum JDM1 8189378 YP_003063857.1 CDS JDM1_2273 NC_012984.1 2434699 2435886 R transport protein complement(2434699..2435886) Lactobacillus plantarum JDM1 8189379 YP_003063858.1 CDS JDM1_2274 NC_012984.1 2436005 2436667 R 2-haloacid dehalogenase complement(2436005..2436667) Lactobacillus plantarum JDM1 8189380 YP_003063859.1 CDS JDM1_2275 NC_012984.1 2436881 2438365 D multidrug transport protein 2436881..2438365 Lactobacillus plantarum JDM1 8189381 YP_003063860.1 CDS JDM1_2276 NC_012984.1 2438362 2438862 D hypothetical protein 2438362..2438862 Lactobacillus plantarum JDM1 8189382 YP_003063861.1 CDS JDM1_2277 NC_012984.1 2438921 2439484 R ribosomal protein acetylating enzyme complement(2438921..2439484) Lactobacillus plantarum JDM1 8189383 YP_003063862.1 CDS JDM1_2278 NC_012984.1 2439568 2440578 R hypothetical protein complement(2439568..2440578) Lactobacillus plantarum JDM1 8189384 YP_003063863.1 CDS JDM1_2279 NC_012984.1 2440695 2441522 D transcription regulator 2440695..2441522 Lactobacillus plantarum JDM1 8189385 YP_003063864.1 CDS isp2 NC_012984.1 2441721 2443382 D transposase 2441721..2443382 Lactobacillus plantarum JDM1 8189386 YP_003063865.1 CDS tagE5 NC_012984.1 2443376 2444884 R poly(glycerol-phosphate) alpha-glucosyltransferase complement(2443376..2444884) Lactobacillus plantarum JDM1 8189388 YP_003063866.1 CDS tagE6 NC_012984.1 2444881 2446425 R poly(glycerol-phosphate) alpha-glucosyltransferase complement(2444881..2446425) Lactobacillus plantarum JDM1 8189387 YP_003063867.1 CDS JDM1_2283 NC_012984.1 2446734 2447717 D hypothetical protein 2446734..2447717 Lactobacillus plantarum JDM1 8189389 YP_003063868.1 CDS JDM1_2284 NC_012984.1 2448185 2449243 D hypothetical protein 2448185..2449243 Lactobacillus plantarum JDM1 8189390 YP_003063869.1 CDS ogt NC_012984.1 2449425 2449925 D methylated-DNA-(protein)-cysteine S-methyltransferase 2449425..2449925 Lactobacillus plantarum JDM1 8189391 YP_003063870.1 CDS JDM1_2286 NC_012984.1 2450642 2451541 D ABC transporter ATP-binding protein 2450642..2451541 Lactobacillus plantarum JDM1 8189392 YP_003063871.1 CDS JDM1_2287 NC_012984.1 2451534 2452751 D ABC transporter permease 2451534..2452751 Lactobacillus plantarum JDM1 8189393 YP_003063872.1 CDS JDM1_2288 NC_012984.1 2452909 2453652 R short-chain dehydrogenase/oxidoreductase complement(2452909..2453652) Lactobacillus plantarum JDM1 8189394 YP_003063873.1 CDS JDM1_2289 NC_012984.1 2453666 2453986 R 4-carboxymuconolactone decarboxylase complement(2453666..2453986) Lactobacillus plantarum JDM1 8189395 YP_003063874.1 CDS JDM1_2290 NC_012984.1 2454020 2454418 R hypothetical protein complement(2454020..2454418) Lactobacillus plantarum JDM1 8189396 YP_003063875.1 CDS JDM1_2291 NC_012984.1 2454591 2455025 D transcription regulator 2454591..2455025 Lactobacillus plantarum JDM1 8189397 YP_003063876.1 CDS dapE2 NC_012984.1 2455197 2456450 R dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase complement(2455197..2456450) Lactobacillus plantarum JDM1 8189398 YP_003063877.1 CDS JDM1_2293 NC_012984.1 2456540 2459131 R ABC transporter permease complement(2456540..2459131) Lactobacillus plantarum JDM1 8189399 YP_003063878.1 CDS JDM1_2294 NC_012984.1 2459125 2459826 R antimicrobial peptide ABC transporter ATPase complement(2459125..2459826) Lactobacillus plantarum JDM1 8189400 YP_003063879.1 CDS JDM1_2295 NC_012984.1 2459998 2460150 D hypothetical protein 2459998..2460150 Lactobacillus plantarum JDM1 8189401 YP_003063880.1 CDS nth1 NC_012984.1 2460319 2460969 R DNA-(apurinic or apyrimidinic site) lyase complement(2460319..2460969) Lactobacillus plantarum JDM1 8189402 YP_003063881.1 CDS thgA3 NC_012984.1 2461108 2461728 R galactoside O-acetyltransferase complement(2461108..2461728) Lactobacillus plantarum JDM1 8189403 YP_003063882.1 CDS sip1 NC_012984.1 2461921 2462538 D signal peptidase I 2461921..2462538 Lactobacillus plantarum JDM1 8189404 YP_003063883.1 CDS sip2 NC_012984.1 2462628 2463251 D signal peptidase I 2462628..2463251 Lactobacillus plantarum JDM1 8189405 YP_003063884.1 CDS JDM1_2300 NC_012984.1 2463410 2463877 R hypothetical protein complement(2463410..2463877) Lactobacillus plantarum JDM1 8189406 YP_003063885.1 CDS JDM1_2301 NC_012984.1 2463849 2464241 R acetyltransferase () complement(2463849..2464241) Lactobacillus plantarum JDM1 8189407 YP_003063886.1 CDS JDM1_2302 NC_012984.1 2464344 2464595 R hypothetical protein complement(2464344..2464595) Lactobacillus plantarum JDM1 8189408 YP_003063887.1 CDS JDM1_2303 NC_012984.1 2464630 2464935 R hypothetical protein complement(2464630..2464935) Lactobacillus plantarum JDM1 8189409 YP_003063888.1 CDS pgm8 NC_012984.1 2465030 2465668 R phosphoglycerate mutase () complement(2465030..2465668) Lactobacillus plantarum JDM1 8189410 YP_003063889.1 CDS JDM1_2305 NC_012984.1 2466206 2466649 R hypothetical protein complement(2466206..2466649) Lactobacillus plantarum JDM1 8189411 YP_003063890.1 CDS JDM1_2306 NC_012984.1 2466670 2467548 R transcription regulator complement(2466670..2467548) Lactobacillus plantarum JDM1 8189412 YP_003063891.1 CDS JDM1_2307 NC_012984.1 2467729 2468325 R oxidoreductase () complement(2467729..2468325) Lactobacillus plantarum JDM1 8189413 YP_003063892.1 CDS adh2 NC_012984.1 2468335 2469375 R alcohol dehydrogenase complement(2468335..2469375) Lactobacillus plantarum JDM1 8189414 YP_003063893.1 CDS JDM1_2309 NC_012984.1 2469396 2470253 R short chain dehydrogenase complement(2469396..2470253) Lactobacillus plantarum JDM1 8189415 YP_003063894.1 CDS JDM1_2310 NC_012984.1 2470693 2470914 R hypothetical protein complement(2470693..2470914) Lactobacillus plantarum JDM1 8189416 YP_003063895.1 CDS JDM1_2311 NC_012984.1 2471170 2471613 R hypothetical protein complement(2471170..2471613) Lactobacillus plantarum JDM1 8189417 YP_003063896.1 CDS maa2 NC_012984.1 2471685 2472254 R maltose O-acetyltransferase complement(2471685..2472254) Lactobacillus plantarum JDM1 8189418 YP_003063897.1 CDS JDM1_2313 NC_012984.1 2472351 2473034 D HAD superfamily hydrolase 2472351..2473034 Lactobacillus plantarum JDM1 8189419 YP_003063898.1 CDS JDM1_2314 NC_012984.1 2473418 2473603 R hypothetical protein complement(2473418..2473603) Lactobacillus plantarum JDM1 8189420 YP_003063899.1 CDS JDM1_2315 NC_012984.1 2474805 2475398 R hypothetical protein complement(2474805..2475398) Lactobacillus plantarum JDM1 8189421 YP_003063900.1 CDS patB NC_012984.1 2475547 2476719 R aminotransferase complement(2475547..2476719) Lactobacillus plantarum JDM1 8189422 YP_003063901.1 CDS JDM1_2317 NC_012984.1 2476709 2477575 R hypothetical protein complement(2476709..2477575) Lactobacillus plantarum JDM1 8189423 YP_003063902.1 CDS JDM1_2318 NC_012984.1 2477678 2478706 R oxidoreductase complement(2477678..2478706) Lactobacillus plantarum JDM1 8189424 YP_003063903.1 CDS JDM1_2319 NC_012984.1 2479344 2480198 R ABC transporter, ATP-binding and permease protein complement(2479344..2480198) Lactobacillus plantarum JDM1 8189425 YP_003063904.1 CDS JDM1_2320 NC_012984.1 2480224 2481132 R ABC transporter, ATP-binding and permease protein complement(2480224..2481132) Lactobacillus plantarum JDM1 8189426 YP_003063905.1 CDS JDM1_2321 NC_012984.1 2481132 2482883 R ABC transporter, ATP-binding and permease protein complement(2481132..2482883) Lactobacillus plantarum JDM1 8189427 YP_003063906.1 CDS JDM1_2322 NC_012984.1 2483153 2484547 D transport protein 2483153..2484547 Lactobacillus plantarum JDM1 8189428 YP_003063907.1 CDS JDM1_2323 NC_012984.1 2485016 2485519 R hypothetical protein complement(2485016..2485519) Lactobacillus plantarum JDM1 8189429 YP_003063908.1 CDS JDM1_2324 NC_012984.1 2486005 2486232 R hypothetical protein complement(2486005..2486232) Lactobacillus plantarum JDM1 8189430 YP_003063909.1 CDS JDM1_2325 NC_012984.1 2486326 2486877 D hypothetical protein 2486326..2486877 Lactobacillus plantarum JDM1 8189431 YP_003063910.1 CDS JDM1_2326 NC_012984.1 2487029 2491171 R hypothetical protein complement(2487029..2491171) Lactobacillus plantarum JDM1 8189432 YP_003063911.1 CDS JDM1_2327 NC_012984.1 2491265 2491819 R transcription regulator complement(2491265..2491819) Lactobacillus plantarum JDM1 8189433 YP_003063912.1 CDS JDM1_2328 NC_012984.1 2491917 2492246 R transcription regulator complement(2491917..2492246) Lactobacillus plantarum JDM1 8189434 YP_003063913.1 CDS endA NC_012984.1 2492744 2493688 R DNA-entry nuclease complement(2492744..2493688) Lactobacillus plantarum JDM1 8189435 YP_003063914.1 CDS JDM1_2330 NC_012984.1 2493765 2494310 R acetyltransferase () complement(2493765..2494310) Lactobacillus plantarum JDM1 8189436 YP_003063915.1 CDS JDM1_2331 NC_012984.1 2494572 2495099 R acetyltransferase () complement(2494572..2495099) Lactobacillus plantarum JDM1 8189437 YP_003063916.1 CDS JDM1_2332 NC_012984.1 2495176 2496006 R hypothetical protein complement(2495176..2496006) Lactobacillus plantarum JDM1 8189438 YP_003063917.1 CDS JDM1_2333 NC_012984.1 2496474 2497679 R CAAX family protease complement(2496474..2497679) Lactobacillus plantarum JDM1 8189439 YP_003063918.1 CDS JDM1_2334 NC_012984.1 2497773 2499395 R ABC transporter ATP-binding protein complement(2497773..2499395) Lactobacillus plantarum JDM1 8189440 YP_003063919.1 CDS JDM1_2335 NC_012984.1 2499709 2500503 R HAD superfamily hydrolase complement(2499709..2500503) Lactobacillus plantarum JDM1 8189441 YP_003063920.1 CDS JDM1_2336 NC_012984.1 2500590 2502515 R hypothetical protein complement(2500590..2502515) Lactobacillus plantarum JDM1 8187650 YP_003063921.1 CDS uvrA3 NC_012984.1 2502566 2505073 D excinuclease ABC subunit A 2502566..2505073 Lactobacillus plantarum JDM1 8187823 YP_003063922.1 CDS JDM1_2338 NC_012984.1 2505381 2506595 R hypothetical protein complement(2505381..2506595) Lactobacillus plantarum JDM1 8187824 YP_003063923.1 CDS ropB NC_012984.1 2506695 2507606 D transcription regulator 2506695..2507606 Lactobacillus plantarum JDM1 8187825 YP_003063924.1 CDS pepR2 NC_012984.1 2508041 2508937 D prolyl aminopeptidase 2508041..2508937 Lactobacillus plantarum JDM1 8187826 YP_003063925.1 CDS JDM1_2341 NC_012984.1 2509083 2510450 D amino acid transport protein 2509083..2510450 Lactobacillus plantarum JDM1 8187827 YP_003063926.1 CDS JDM1_2342 NC_012984.1 2510539 2511789 R hypothetical protein complement(2510539..2511789) Lactobacillus plantarum JDM1 8187828 YP_003063927.1 CDS npp NC_012984.1 2511897 2513192 R nucleotide pyrophosphatase () complement(2511897..2513192) Lactobacillus plantarum JDM1 8187829 YP_003063928.1 CDS JDM1_2344 NC_012984.1 2513319 2514149 R lipase/esterase complement(2513319..2514149) Lactobacillus plantarum JDM1 8187830 YP_003063929.1 CDS JDM1_2345 NC_012984.1 2514326 2515045 D transcription regulator 2514326..2515045 Lactobacillus plantarum JDM1 8187831 YP_003063930.1 CDS JDM1_2346 NC_012984.1 2515428 2517902 R cell surface protein precursor complement(2515428..2517902) Lactobacillus plantarum JDM1 8187832 YP_003063931.1 CDS JDM1_2347 NC_012984.1 2518319 2518561 R hypothetical protein complement(2518319..2518561) Lactobacillus plantarum JDM1 8187833 YP_003063932.1 CDS JDM1_2348 NC_012984.1 2518944 2520074 R diguanylate cyclase/phosphodiesterase domain-containing protein complement(2518944..2520074) Lactobacillus plantarum JDM1 8187834 YP_003063933.1 CDS JDM1_2349 NC_012984.1 2520090 2520770 R diguanylate cyclase/phosphodiesterase domain-containing protein complement(2520090..2520770) Lactobacillus plantarum JDM1 8187835 YP_003063934.1 CDS nrdG NC_012984.1 2520981 2521529 R anaerobic ribonucleotide reductase activator protein complement(2520981..2521529) Lactobacillus plantarum JDM1 8187836 YP_003063935.1 CDS nrdD NC_012984.1 2521495 2523717 R Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase complement(2521495..2523717) Lactobacillus plantarum JDM1 8187837 YP_003063936.1 CDS JDM1_2352 NC_012984.1 2524166 2524639 D lipoprotein precursor 2524166..2524639 Lactobacillus plantarum JDM1 8187838 YP_003063937.1 CDS def2 NC_012984.1 2524782 2525192 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 2524782..2525192 Lactobacillus plantarum JDM1 8187839 YP_003063938.1 CDS apbE2 NC_012984.1 2525232 2526275 D thiamin biosynthesis lipoprotein ApbE 2525232..2526275 Lactobacillus plantarum JDM1 8187840 YP_003063939.1 CDS JDM1_2355 NC_012984.1 2526464 2527468 R transcription regulator complement(2526464..2527468) Lactobacillus plantarum JDM1 8187841 YP_003063940.1 CDS JDM1_2356 NC_012984.1 2527644 2527835 R hypothetical protein complement(2527644..2527835) Lactobacillus plantarum JDM1 8187842 YP_003063941.1 CDS JDM1_2357 NC_012984.1 2528151 2529410 R cell surface protein precursor complement(2528151..2529410) Lactobacillus plantarum JDM1 8187843 YP_003063942.1 CDS JDM1_2358 NC_012984.1 2529851 2530753 D transcription regulator 2529851..2530753 Lactobacillus plantarum JDM1 8187844 YP_003063943.1 CDS JDM1_2359 NC_012984.1 2530816 2532195 R transport protein complement(2530816..2532195) Lactobacillus plantarum JDM1 8187845 YP_003063944.1 CDS ubiD NC_012984.1 2532332 2533804 R 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(2532332..2533804) Lactobacillus plantarum JDM1 8187846 YP_003063945.1 CDS JDM1_2361 NC_012984.1 2534484 2534696 D hypothetical protein 2534484..2534696 Lactobacillus plantarum JDM1 8187847 YP_003063946.1 CDS JDM1_2362 NC_012984.1 2535044 2536492 D hypothetical protein 2535044..2536492 Lactobacillus plantarum JDM1 8187848 YP_003063947.1 CDS JDM1_2363 NC_012984.1 2536511 2537485 D hypothetical protein 2536511..2537485 Lactobacillus plantarum JDM1 8187849 YP_003063948.1 CDS JDM1_2364 NC_012984.1 2537754 2538020 R hypothetical protein complement(2537754..2538020) Lactobacillus plantarum JDM1 8187850 YP_003063949.1 CDS JDM1_2365 NC_012984.1 2538172 2538921 R esterase complement(2538172..2538921) Lactobacillus plantarum JDM1 8187851 YP_003063950.1 CDS JDM1_2366 NC_012984.1 2539086 2540180 R hypothetical protein complement(2539086..2540180) Lactobacillus plantarum JDM1 8187852 YP_003063951.1 CDS JDM1_2367 NC_012984.1 2540359 2541768 R hypothetical protein complement(2540359..2541768) Lactobacillus plantarum JDM1 8187853 YP_003063952.1 CDS JDM1_2368 NC_012984.1 2542092 2543810 R cell surface protein precursor complement(2542092..2543810) Lactobacillus plantarum JDM1 8187854 YP_003063953.1 CDS JDM1_2369 NC_012984.1 2543947 2544852 R transport protein complement(2543947..2544852) Lactobacillus plantarum JDM1 8187855 YP_003063954.1 CDS JDM1_2370 NC_012984.1 2545046 2545747 D hypothetical protein 2545046..2545747 Lactobacillus plantarum JDM1 8187856 YP_003063955.1 CDS JDM1_2371 NC_012984.1 2546029 2546952 R metal-dependent hydrolase () complement(2546029..2546952) Lactobacillus plantarum JDM1 8187857 YP_003063956.1 CDS JDM1_2372 NC_012984.1 2547052 2547675 D transcription regulator () 2547052..2547675 Lactobacillus plantarum JDM1 8187858 YP_003063957.1 CDS JDM1_2373 NC_012984.1 2547758 2548060 R transcription regulator () complement(2547758..2548060) Lactobacillus plantarum JDM1 8187859 YP_003063958.1 CDS JDM1_2374 NC_012984.1 2548163 2549050 R sugar kinase and transcription regulator complement(2548163..2549050) Lactobacillus plantarum JDM1 8187860 YP_003063959.1 CDS lmrA NC_012984.1 2549243 2551000 R multidrug ABC transporter, ATP-binding and permease protein complement(2549243..2551000) Lactobacillus plantarum JDM1 8187861 YP_003063960.1 CDS JDM1_2376 NC_012984.1 2551029 2551565 R transcription regulator complement(2551029..2551565) Lactobacillus plantarum JDM1 8187862 YP_003063961.1 CDS JDM1_2377 NC_012984.1 2551717 2552370 R nitroreductase complement(2551717..2552370) Lactobacillus plantarum JDM1 8187863 YP_003063962.1 CDS pts22CBA NC_012984.1 2552716 2554704 D N-acetylglucosamine PTS, EIICBA 2552716..2554704 Lactobacillus plantarum JDM1 8187864 YP_003063963.1 CDS JDM1_2379 NC_012984.1 2555250 2556023 R ABC transporter ATP-binding protein complement(2555250..2556023) Lactobacillus plantarum JDM1 8187865 YP_003063964.1 CDS JDM1_2380 NC_012984.1 2555920 2556921 R ABC transporter permease complement(2555920..2556921) Lactobacillus plantarum JDM1 8187866 YP_003063965.1 CDS JDM1_2381 NC_012984.1 2556939 2557904 R ABC transporter substrate-binding protein complement(2556939..2557904) Lactobacillus plantarum JDM1 8187867 YP_003063966.1 CDS JDM1_2382 NC_012984.1 2558346 2559854 R hypothetical protein complement(2558346..2559854) Lactobacillus plantarum JDM1 8187868 YP_003063967.1 CDS JDM1_2383 NC_012984.1 2559851 2560228 R cell surface protein precursor () complement(2559851..2560228) Lactobacillus plantarum JDM1 8187869 YP_003063968.1 CDS JDM1_2384 NC_012984.1 2560310 2561353 R cell surface protein precursor complement(2560310..2561353) Lactobacillus plantarum JDM1 8187870 YP_003063969.1 CDS JDM1_2385 NC_012984.1 2561427 2562209 R hypothetical protein complement(2561427..2562209) Lactobacillus plantarum JDM1 8187871 YP_003063970.1 CDS JDM1_2386 NC_012984.1 2562850 2563485 R hypothetical protein complement(2562850..2563485) Lactobacillus plantarum JDM1 8187872 YP_003063971.1 CDS livE NC_012984.1 2563488 2564192 R branched-chain amino acid ABC transporter, ATP-binding protein complement(2563488..2564192) Lactobacillus plantarum JDM1 8187873 YP_003063972.1 CDS livD NC_012984.1 2564193 2564972 R branched-chain amino acid ABC transporter, ATP-binding protein complement(2564193..2564972) Lactobacillus plantarum JDM1 8187874 YP_003063973.1 CDS livC NC_012984.1 2564965 2565927 R branched-chain amino acid ABC transporter, permease protein complement(2564965..2565927) Lactobacillus plantarum JDM1 8187875 YP_003063974.1 CDS livB NC_012984.1 2565944 2566822 R branched-chain amino acid ABC transporter, permease protein complement(2565944..2566822) Lactobacillus plantarum JDM1 8187876 YP_003063975.1 CDS livA NC_012984.1 2566853 2568046 R branched-chain amino acid ABC transporter, substrate binding protein complement(2566853..2568046) Lactobacillus plantarum JDM1 8187877 YP_003063976.1 CDS JDM1_2392 NC_012984.1 2568615 2568833 R hypothetical protein complement(2568615..2568833) Lactobacillus plantarum JDM1 8187878 YP_003063977.1 CDS zmp3 NC_012984.1 2568928 2569728 R extracellular zinc metalloproteinase () complement(2568928..2569728) Lactobacillus plantarum JDM1 8187879 YP_003063978.1 CDS gtcA3 NC_012984.1 2569961 2570311 R teichoic acid glycosylation protein () complement(2569961..2570311) Lactobacillus plantarum JDM1 8187880 YP_003063979.1 CDS JDM1_2395 NC_012984.1 2570850 2571521 R transcription regulator complement(2570850..2571521) Lactobacillus plantarum JDM1 8187881 YP_003063980.1 CDS mntH2 NC_012984.1 2571851 2573443 D manganese transport protein 2571851..2573443 Lactobacillus plantarum JDM1 8187882 YP_003063981.1 CDS JDM1_2397 NC_012984.1 2573443 2573874 D hypothetical protein 2573443..2573874 Lactobacillus plantarum JDM1 8187883 YP_003063982.1 CDS JDM1_2398 NC_012984.1 2573997 2574269 D hypothetical protein 2573997..2574269 Lactobacillus plantarum JDM1 8187884 YP_003063983.1 CDS JDM1_2399 NC_012984.1 2574348 2575028 R hypothetical protein complement(2574348..2575028) Lactobacillus plantarum JDM1 8187885 YP_003063984.1 CDS JDM1_2400 NC_012984.1 2575044 2575358 R transcription regulator complement(2575044..2575358) Lactobacillus plantarum JDM1 8187886 YP_003063985.1 CDS JDM1_2401 NC_012984.1 2575382 2575948 R hypothetical protein complement(2575382..2575948) Lactobacillus plantarum JDM1 8187887 YP_003063986.1 CDS JDM1_2402 NC_012984.1 2576929 2578929 R ABC transporter, ATP-binding and permease protein complement(2576929..2578929) Lactobacillus plantarum JDM1 8187888 YP_003063987.1 CDS JDM1_2403 NC_012984.1 2579304 2582642 R cell surface protein precursor () complement(2579304..2582642) Lactobacillus plantarum JDM1 8187889 YP_003063988.1 CDS JDM1_2404 NC_012984.1 2582855 2583247 R hypothetical protein complement(2582855..2583247) Lactobacillus plantarum JDM1 8187890 YP_003063989.1 CDS JDM1_2405 NC_012984.1 2583285 2584121 R hypothetical protein complement(2583285..2584121) Lactobacillus plantarum JDM1 8187891 YP_003063990.1 CDS JDM1_2406 NC_012984.1 2584258 2584623 D hypothetical protein 2584258..2584623 Lactobacillus plantarum JDM1 8187892 YP_003063991.1 CDS JDM1_2407 NC_012984.1 2584754 2585575 D transcription regulator 2584754..2585575 Lactobacillus plantarum JDM1 8187893 YP_003063992.1 CDS pts23A NC_012984.1 2585778 2586224 R cellobiose PTS, EIIA complement(2585778..2586224) Lactobacillus plantarum JDM1 8187894 YP_003063993.1 CDS pts23B NC_012984.1 2586677 2587003 R cellobiose PTS, EIIB complement(2586677..2587003) Lactobacillus plantarum JDM1 8187895 YP_003063994.1 CDS pts23C NC_012984.1 2587027 2588499 R cellobiose PTS, EIIC complement(2587027..2588499) Lactobacillus plantarum JDM1 8187896 YP_003063995.1 CDS pbg6 NC_012984.1 2588499 2589881 R 6-phospho-beta-glucosidase complement(2588499..2589881) Lactobacillus plantarum JDM1 8187897 YP_003063996.1 CDS JDM1_2412 NC_012984.1 2590078 2591097 R oxidoreductase () complement(2590078..2591097) Lactobacillus plantarum JDM1 8187898 YP_003063997.1 CDS JDM1_2413 NC_012984.1 2591203 2591646 D transcription regulator 2591203..2591646 Lactobacillus plantarum JDM1 8187899 YP_003063998.1 CDS JDM1_2414 NC_012984.1 2592030 2592644 D hypothetical protein 2592030..2592644 Lactobacillus plantarum JDM1 8187900 YP_003063999.1 CDS JDM1_2415 NC_012984.1 2593084 2593746 D hypothetical protein 2593084..2593746 Lactobacillus plantarum JDM1 8187901 YP_003064000.1 CDS JDM1_2416 NC_012984.1 2593906 2594508 R hypothetical protein complement(2593906..2594508) Lactobacillus plantarum JDM1 8187902 YP_003064001.1 CDS JDM1_2418 NC_012984.1 2594657 2595004 D hypothetical protein 2594657..2595004 Lactobacillus plantarum JDM1 8187903 YP_003064002.1 CDS JDM1_2417 NC_012984.1 2594990 2595883 R ABC transporter substrate-binding protein complement(2594990..2595883) Lactobacillus plantarum JDM1 8189656 YP_003064003.1 CDS JDM1_2419 NC_012984.1 2595997 2596521 D hypothetical protein 2595997..2596521 Lactobacillus plantarum JDM1 8189820 YP_003064004.1 CDS tag2 NC_012984.1 2596819 2597292 D DNA-3-methyladenine glycosylase I 2596819..2597292 Lactobacillus plantarum JDM1 8189657 YP_003064005.1 CDS JDM1_2421 NC_012984.1 2597491 2598627 D diguanylate cyclase/phosphodiesterase domain-containing protein 2597491..2598627 Lactobacillus plantarum JDM1 8189658 YP_003064006.1 CDS JDM1_2422 NC_012984.1 2598692 2599123 R hypothetical protein complement(2598692..2599123) Lactobacillus plantarum JDM1 8189659 YP_003064007.1 CDS umuC NC_012984.1 2599123 2600646 R UV-damage repair protein complement(2599123..2600646) Lactobacillus plantarum JDM1 8189660 YP_003064008.1 CDS JDM1_2424 NC_012984.1 2601199 2602389 R ABC transporter permease complement(2601199..2602389) Lactobacillus plantarum JDM1 8189661 YP_003064009.1 CDS JDM1_2425 NC_012984.1 2602411 2604192 R ABC transporter ATP-binding protein complement(2602411..2604192) Lactobacillus plantarum JDM1 8189662 YP_003064010.1 CDS JDM1_2426 NC_012984.1 2604185 2605909 R ABC transporter, ATP-binding and permease protein complement(2604185..2605909) Lactobacillus plantarum JDM1 8189663 YP_003064012.1 CDS amd NC_012984.1 2606276 2607475 D aminoacylase 2606276..2607475 Lactobacillus plantarum JDM1 8189665 YP_003064013.1 CDS JDM1_2429 NC_012984.1 2607567 2608457 R short-chain dehydrogenase/oxidoreductase complement(2607567..2608457) Lactobacillus plantarum JDM1 8189666 YP_003064014.1 CDS JDM1_2430 NC_012984.1 2608711 2609190 R hypothetical protein complement(2608711..2609190) Lactobacillus plantarum JDM1 8189667 YP_003064015.1 CDS JDM1_2431 NC_012984.1 2609293 2610114 R hypothetical protein complement(2609293..2610114) Lactobacillus plantarum JDM1 8189668 YP_003064016.1 CDS JDM1_2432 NC_012984.1 2610241 2611725 R amino acid transport protein complement(2610241..2611725) Lactobacillus plantarum JDM1 8189669 YP_003064017.1 CDS JDM1_2433 NC_012984.1 2612022 2612417 D hypothetical protein 2612022..2612417 Lactobacillus plantarum JDM1 8189670 YP_003064018.1 CDS dhaT NC_012984.1 2612713 2613885 D 1,3-propanediol dehydrogenase 2612713..2613885 Lactobacillus plantarum JDM1 8189671 YP_003064019.1 CDS JDM1_2435 NC_012984.1 2614955 2616076 R aryl-alcohol dehydrogenase complement(2614955..2616076) Lactobacillus plantarum JDM1 8189672 YP_003064020.1 CDS copA NC_012984.1 2616439 2618364 R copper transporting ATPase complement(2616439..2618364) Lactobacillus plantarum JDM1 8189673 YP_003064021.1 CDS JDM1_2437 NC_012984.1 2618649 2619023 R hypothetical protein complement(2618649..2619023) Lactobacillus plantarum JDM1 8189674 YP_003064022.1 CDS JDM1_2438 NC_012984.1 2619430 2623467 R cell surface protein precursor complement(2619430..2623467) Lactobacillus plantarum JDM1 8189675 YP_003064023.1 CDS JDM1_2439 NC_012984.1 2623601 2624362 R transcription regulator complement(2623601..2624362) Lactobacillus plantarum JDM1 8189676 YP_003064024.1 CDS JDM1_2440 NC_012984.1 2624693 2624977 R hypothetical protein complement(2624693..2624977) Lactobacillus plantarum JDM1 8189677 YP_003064025.1 CDS hpk9 NC_012984.1 2624981 2626249 R histidine protein kinase; sensor protein complement(2624981..2626249) Lactobacillus plantarum JDM1 8189678 YP_003064026.1 CDS JDM1_2442 NC_012984.1 2626519 2628006 R hypothetical protein complement(2626519..2628006) Lactobacillus plantarum JDM1 8189679 YP_003064027.1 CDS JDM1_2443 NC_012984.1 2627999 2628424 R cell surface protein precursor complement(2627999..2628424) Lactobacillus plantarum JDM1 8189680 YP_003064028.1 CDS JDM1_2444 NC_012984.1 2628452 2629516 R cell surface protein precursor complement(2628452..2629516) Lactobacillus plantarum JDM1 8189681 YP_003064029.1 CDS JDM1_2446 NC_012984.1 2631002 2631970 R oxidoreductase complement(2631002..2631970) Lactobacillus plantarum JDM1 8189683 YP_003064030.1 CDS JDM1_2447 NC_012984.1 2631995 2632390 R hypothetical protein complement(2631995..2632390) Lactobacillus plantarum JDM1 8189684 YP_003064031.1 CDS JDM1_2448 NC_012984.1 2632486 2633118 R hypothetical protein complement(2632486..2633118) Lactobacillus plantarum JDM1 8189685 YP_003064032.1 CDS JDM1_2449 NC_012984.1 2633299 2634342 R cell surface protein precursor complement(2633299..2634342) Lactobacillus plantarum JDM1 8189686 YP_003064033.1 CDS JDM1_2450 NC_012984.1 2634415 2635023 R hypothetical protein complement(2634415..2635023) Lactobacillus plantarum JDM1 8189687 YP_003064034.1 CDS JDM1_2451 NC_012984.1 2635020 2635391 R cell surface protein precursor complement(2635020..2635391) Lactobacillus plantarum JDM1 8189688 YP_003064035.1 CDS JDM1_2452 NC_012984.1 2635568 2638351 R cell surface protein () complement(2635568..2638351) Lactobacillus plantarum JDM1 8189689 YP_003064036.1 CDS JDM1_2453 NC_012984.1 2638874 2639698 R hypothetical protein complement(2638874..2639698) Lactobacillus plantarum JDM1 8189690 YP_003064037.1 CDS JDM1_2454 NC_012984.1 2639834 2640487 R HAD superfamily hydrolase complement(2639834..2640487) Lactobacillus plantarum JDM1 8189691 YP_003064038.1 CDS JDM1_2455 NC_012984.1 2640668 2640997 D transcription regulator () 2640668..2640997 Lactobacillus plantarum JDM1 8189692 YP_003064039.1 CDS JDM1_2456 NC_012984.1 2640994 2641671 D hypothetical protein 2640994..2641671 Lactobacillus plantarum JDM1 8189693 YP_003064040.1 CDS JDM1_2457 NC_012984.1 2641745 2642122 R transcription regulator () complement(2641745..2642122) Lactobacillus plantarum JDM1 8189694 YP_003064041.1 CDS JDM1_2458 NC_012984.1 2642234 2643439 D transport protein 2642234..2643439 Lactobacillus plantarum JDM1 8189695 YP_003064042.1 CDS JDM1_2459 NC_012984.1 2643970 2644599 D hypothetical protein 2643970..2644599 Lactobacillus plantarum JDM1 8189696 YP_003064043.1 CDS asnB2 NC_012984.1 2644731 2646632 R asparagine synthase complement(2644731..2646632) Lactobacillus plantarum JDM1 8189697 YP_003064044.1 CDS rrp10 NC_012984.1 2647127 2647873 R response regulator complement(2647127..2647873) Lactobacillus plantarum JDM1 8189698 YP_003064045.1 CDS hpk10 NC_012984.1 2647878 2649128 R histidine protein kinase; sensor protein complement(2647878..2649128) Lactobacillus plantarum JDM1 8189699 YP_003064046.1 CDS JDM1_2463 NC_012984.1 2649483 2650064 R transcription regulator () complement(2649483..2650064) Lactobacillus plantarum JDM1 8189700 YP_003064047.1 CDS JDM1_2464 NC_012984.1 2650233 2651147 D hypothetical protein 2650233..2651147 Lactobacillus plantarum JDM1 8189701 YP_003064048.1 CDS gabD NC_012984.1 2651187 2652599 D succinate-semialdehyde dehydrogenase NADP+ 2651187..2652599 Lactobacillus plantarum JDM1 8189702 YP_003064049.1 CDS JDM1_2466 NC_012984.1 2652870 2654621 R muramidase () complement(2652870..2654621) Lactobacillus plantarum JDM1 8189703 YP_003064050.1 CDS JDM1_2467 NC_012984.1 2654724 2655452 R hypothetical protein complement(2654724..2655452) Lactobacillus plantarum JDM1 8189704 YP_003064051.1 CDS JDM1_2468 NC_012984.1 2655738 2656022 D hypothetical protein 2655738..2656022 Lactobacillus plantarum JDM1 8189705 YP_003064052.1 CDS JDM1_2469 NC_012984.1 2656306 2656671 R transcription regulator () complement(2656306..2656671) Lactobacillus plantarum JDM1 8189706 YP_003064053.1 CDS JDM1_2470 NC_012984.1 2656804 2657532 D short-chain dehydrogenase/oxidoreductase 2656804..2657532 Lactobacillus plantarum JDM1 8189707 YP_003064054.1 CDS JDM1_2471 NC_012984.1 2657691 2658257 R transcription regulator () complement(2657691..2658257) Lactobacillus plantarum JDM1 8189708 YP_003064055.1 CDS JDM1_2472 NC_012984.1 2658384 2659421 D oxidoreductase () 2658384..2659421 Lactobacillus plantarum JDM1 8189709 YP_003064056.1 CDS JDM1_2473 NC_012984.1 2659570 2660136 R hypothetical protein complement(2659570..2660136) Lactobacillus plantarum JDM1 8189710 YP_003064057.1 CDS JDM1_2474 NC_012984.1 2660356 2661309 R oxidoreductase complement(2660356..2661309) Lactobacillus plantarum JDM1 8189711 YP_003064058.1 CDS JDM1_2475 NC_012984.1 2661819 2662037 D hypothetical protein 2661819..2662037 Lactobacillus plantarum JDM1 8189712 YP_003064059.1 CDS JDM1_2476 NC_012984.1 2662256 2662495 R hypothetical protein complement(2662256..2662495) Lactobacillus plantarum JDM1 8189713 YP_003064060.1 CDS JDM1_2477 NC_012984.1 2662826 2664304 R transport protein complement(2662826..2664304) Lactobacillus plantarum JDM1 8189714 YP_003064061.1 CDS JDM1_2478 NC_012984.1 2664421 2665020 D transcription regulator 2664421..2665020 Lactobacillus plantarum JDM1 8189715 YP_003064062.1 CDS JDM1_2479 NC_012984.1 2665141 2665419 R ferrichrome ABC transporter substrate-binding protein complement(2665141..2665419) Lactobacillus plantarum JDM1 8189716 YP_003064063.1 CDS JDM1_2480 NC_012984.1 2665453 2665932 R ferrichrome ABC transporter substrate-binding protein complement(2665453..2665932) Lactobacillus plantarum JDM1 8189717 YP_003064064.1 CDS fhuC NC_012984.1 2666307 2667101 D ferrichrome ABC transporter ATP-binding protein 2666307..2667101 Lactobacillus plantarum JDM1 8189718 YP_003064065.1 CDS fhuB NC_012984.1 2667098 2668096 D ferrichrome ABC transporter, permease protein 2667098..2668096 Lactobacillus plantarum JDM1 8189719 YP_003064066.1 CDS fhuG NC_012984.1 2668093 2669088 D ferrichrome ABC transporter, permease protein 2668093..2669088 Lactobacillus plantarum JDM1 8189720 YP_003064067.1 CDS JDM1_2485 NC_012984.1 2669333 2669845 D transcription regulator () 2669333..2669845 Lactobacillus plantarum JDM1 8189721 YP_003064068.1 CDS JDM1_2484 NC_012984.1 2669826 2670443 R oxidoreductase () complement(2669826..2670443) Lactobacillus plantarum JDM1 8189723 YP_003064069.1 CDS JDM1_2486 NC_012984.1 2670424 2670699 R oxidoreductase () complement(2670424..2670699) Lactobacillus plantarum JDM1 8189722 YP_003064070.1 CDS JDM1_2487 NC_012984.1 2670993 2671739 R short-chain dehydrogenase/oxidoreductase complement(2670993..2671739) Lactobacillus plantarum JDM1 8189724 YP_003064071.1 CDS JDM1_2488 NC_012984.1 2671756 2672211 R hypothetical protein complement(2671756..2672211) Lactobacillus plantarum JDM1 8189725 YP_003064072.1 CDS JDM1_2489 NC_012984.1 2672521 2673345 D short-chain dehydrogenase/oxidoreductase 2672521..2673345 Lactobacillus plantarum JDM1 8189726 YP_003064073.1 CDS JDM1_2490 NC_012984.1 2673416 2673736 D transcription regulator 2673416..2673736 Lactobacillus plantarum JDM1 8189727 YP_003064074.1 CDS JDM1_2491 NC_012984.1 2673834 2679947 R cell surface protein precursor complement(2673834..2679947) Lactobacillus plantarum JDM1 8189728 YP_003064075.1 CDS JDM1_2492 NC_012984.1 2680428 2681474 R cell surface protein precursor complement(2680428..2681474) Lactobacillus plantarum JDM1 8189729 YP_003064076.1 CDS JDM1_2493 NC_012984.1 2681548 2682120 R hypothetical protein complement(2681548..2682120) Lactobacillus plantarum JDM1 8189730 YP_003064077.1 CDS JDM1_2494 NC_012984.1 2682173 2684425 R cell surface protein () complement(2682173..2684425) Lactobacillus plantarum JDM1 8189731 YP_003064078.1 CDS JDM1_2495 NC_012984.1 2685369 2686031 D transcription regulator 2685369..2686031 Lactobacillus plantarum JDM1 8189732 YP_003064079.1 CDS lepA2 NC_012984.1 2686028 2687815 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 2686028..2687815 Lactobacillus plantarum JDM1 8189733 YP_003064080.1 CDS JDM1_2497 NC_012984.1 2688351 2689952 R Na(+)/H(+) antiporter complement(2688351..2689952) Lactobacillus plantarum JDM1 8189734 YP_003064081.1 CDS JDM1_2498 NC_012984.1 2690254 2691078 R pyrophosphatase () complement(2690254..2691078) Lactobacillus plantarum JDM1 8189735 YP_003064082.1 CDS JDM1_2499 NC_012984.1 2691486 2692196 R hypothetical protein complement(2691486..2692196) Lactobacillus plantarum JDM1 8189736 YP_003064083.1 CDS JDM1_2500 NC_012984.1 2692663 2696202 D hypothetical protein 2692663..2696202 Lactobacillus plantarum JDM1 8189737 YP_003064084.1 CDS isp2 NC_012984.1 2696383 2698182 D transposase 2696383..2698182 Lactobacillus plantarum JDM1 8188640 YP_003064085.1 CDS JDM1_2502 NC_012984.1 2698182 2698649 D stress induced DNA binding protein 2698182..2698649 Lactobacillus plantarum JDM1 8190143 YP_003064086.1 CDS JDM1_2503 NC_012984.1 2698748 2699473 R transcription regulator complement(2698748..2699473) Lactobacillus plantarum JDM1 8190144 YP_003064087.1 CDS pbg1 NC_012984.1 2699553 2700986 R 6-phospho-beta-glucosidase complement(2699553..2700986) Lactobacillus plantarum JDM1 8190145 YP_003064088.1 CDS celD NC_012984.1 2701047 2702405 R required for cellobiose uptake and metabolism; cellobiose phosphotransferase system IIC component complement(2701047..2702405) Lactobacillus plantarum JDM1 8190146 YP_003064089.1 CDS JDM1_2506 NC_012984.1 2702427 2702924 R hypothetical protein complement(2702427..2702924) Lactobacillus plantarum JDM1 8190147 YP_003064090.1 CDS JDM1_2507 NC_012984.1 2703649 2704035 R 4-carboxymuconolactone decarboxylase complement(2703649..2704035) Lactobacillus plantarum JDM1 8190148 YP_003064091.1 CDS JDM1_2508 NC_012984.1 2704124 2704492 D transcription regulator 2704124..2704492 Lactobacillus plantarum JDM1 8190149 YP_003064092.1 CDS JDM1_2509 NC_012984.1 2704615 2704983 D hypothetical protein 2704615..2704983 Lactobacillus plantarum JDM1 8190150 YP_003064093.1 CDS JDM1_2510 NC_012984.1 2705402 2706679 D hypothetical protein 2705402..2706679 Lactobacillus plantarum JDM1 8190151 YP_003064094.1 CDS JDM1_2511 NC_012984.1 2706993 2707268 R hypothetical protein complement(2706993..2707268) Lactobacillus plantarum JDM1 8190152 YP_003064095.1 CDS JDM1_2512 NC_012984.1 2707493 2707963 D hypothetical protein 2707493..2707963 Lactobacillus plantarum JDM1 8190153 YP_003064096.1 CDS JDM1_2513 NC_012984.1 2708336 2708671 R transcription regulator () complement(2708336..2708671) Lactobacillus plantarum JDM1 8190154 YP_003064097.1 CDS JDM1_2514 NC_012984.1 2709148 2709882 R oxidoreductase complement(2709148..2709882) Lactobacillus plantarum JDM1 8190155 YP_003064098.1 CDS JDM1_2515 NC_012984.1 2710909 2711997 D malate dehydrogenase 2710909..2711997 Lactobacillus plantarum JDM1 8190156 YP_003064099.1 CDS JDM1_2516 NC_012984.1 2712555 2714390 D muramidase 2712555..2714390 Lactobacillus plantarum JDM1 8190157 YP_003064100.1 CDS JDM1_2517 NC_012984.1 2714410 2715069 D hypothetical protein 2714410..2715069 Lactobacillus plantarum JDM1 8190158 YP_003064101.1 CDS JDM1_2518 NC_012984.1 2715747 2716013 R hypothetical protein complement(2715747..2716013) Lactobacillus plantarum JDM1 8190159 YP_003064102.1 CDS JDM1_2519 NC_012984.1 2716619 2718337 R hypothetical protein complement(2716619..2718337) Lactobacillus plantarum JDM1 8190160 YP_003064103.1 CDS JDM1_2520 NC_012984.1 2718502 2718633 R hypothetical protein complement(2718502..2718633) Lactobacillus plantarum JDM1 8190161 YP_003064104.1 CDS JDM1_2521 NC_012984.1 2718951 2719166 R hypothetical protein complement(2718951..2719166) Lactobacillus plantarum JDM1 8190162 YP_003064105.1 CDS JDM1_2522 NC_012984.1 2719352 2719690 R hypothetical protein complement(2719352..2719690) Lactobacillus plantarum JDM1 8190163 YP_003064106.1 CDS JDM1_2523 NC_012984.1 2719702 2720217 R hypothetical protein complement(2719702..2720217) Lactobacillus plantarum JDM1 8190164 YP_003064107.1 CDS JDM1_2524 NC_012984.1 2720267 2722243 R hypothetical protein complement(2720267..2722243) Lactobacillus plantarum JDM1 8190165 YP_003064108.1 CDS JDM1_2525 NC_012984.1 2722483 2722791 R hypothetical protein complement(2722483..2722791) Lactobacillus plantarum JDM1 8190166 YP_003064109.1 CDS JDM1_2526 NC_012984.1 2722938 2723540 R hypothetical protein complement(2722938..2723540) Lactobacillus plantarum JDM1 8190167 YP_003064110.1 CDS JDM1_2527 NC_012984.1 2723544 2724077 R hypothetical protein complement(2723544..2724077) Lactobacillus plantarum JDM1 8190168 YP_003064111.1 CDS JDM1_2528 NC_012984.1 2724098 2724361 R hypothetical protein complement(2724098..2724361) Lactobacillus plantarum JDM1 8190169 YP_003064112.1 CDS JDM1_2529 NC_012984.1 2724474 2725607 R prophage Lp2 protein 2, integrase complement(2724474..2725607) Lactobacillus plantarum JDM1 8190170 YP_003064113.1 CDS JDM1_2530 NC_012984.1 2725610 2726176 R hypothetical protein complement(2725610..2726176) Lactobacillus plantarum JDM1 8190171 YP_003064114.1 CDS isp2 NC_012984.1 2726193 2727854 R transposase complement(2726193..2727854) Lactobacillus plantarum JDM1 8190172 YP_003064115.1 CDS JDM1_2532 NC_012984.1 2728016 2728267 R hypothetical protein complement(2728016..2728267) Lactobacillus plantarum JDM1 8190173 YP_003064116.1 CDS JDM1_2533 NC_012984.1 2728469 2728678 R hypothetical protein complement(2728469..2728678) Lactobacillus plantarum JDM1 8190174 YP_003064117.1 CDS JDM1_2534 NC_012984.1 2728745 2728951 R hypothetical protein complement(2728745..2728951) Lactobacillus plantarum JDM1 8190175 YP_003064118.1 CDS gpmA NC_012984.1 2729462 2730154 R 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(2729462..2730154) Lactobacillus plantarum JDM1 8190176 YP_003064119.1 CDS JDM1_2536 NC_012984.1 2730230 2731312 R transport protein complement(2730230..2731312) Lactobacillus plantarum JDM1 8190177 YP_003064120.1 CDS xylR NC_012984.1 2731459 2732613 R xylose operon regulator complement(2731459..2732613) Lactobacillus plantarum JDM1 8190178 YP_003064121.1 CDS JDM1_2538 NC_012984.1 2732985 2734025 R hypothetical protein complement(2732985..2734025) Lactobacillus plantarum JDM1 8190179 YP_003064122.1 CDS cfa2 NC_012984.1 2734165 2735358 D cyclopropane-fatty-acyl-phospholipid synthase 2734165..2735358 Lactobacillus plantarum JDM1 8190180 YP_003064123.1 CDS JDM1_2540 NC_012984.1 2735440 2736354 R hypothetical protein complement(2735440..2736354) Lactobacillus plantarum JDM1 8190181 YP_003064124.1 CDS JDM1_2541 NC_012984.1 2736664 2737425 R serine/threonine protein kinase complement(2736664..2737425) Lactobacillus plantarum JDM1 8190182 YP_003064125.1 CDS JDM1_2542 NC_012984.1 2737518 2737736 R serine/threonine protein kinase complement(2737518..2737736) Lactobacillus plantarum JDM1 8190183 YP_003064126.1 CDS JDM1_2543 NC_012984.1 2737803 2738165 D hypothetical protein 2737803..2738165 Lactobacillus plantarum JDM1 8190184 YP_003064127.1 CDS JDM1_2544 NC_012984.1 2738174 2738728 D hypothetical protein 2738174..2738728 Lactobacillus plantarum JDM1 8190185 YP_003064128.1 CDS JDM1_2545 NC_012984.1 2738780 2739214 D hypothetical protein 2738780..2739214 Lactobacillus plantarum JDM1 8190186 YP_003064129.1 CDS JDM1_2546 NC_012984.1 2739324 2739683 R hypothetical protein complement(2739324..2739683) Lactobacillus plantarum JDM1 8190187 YP_003064130.1 CDS JDM1_2547 NC_012984.1 2740156 2740878 R transport protein complement(2740156..2740878) Lactobacillus plantarum JDM1 8190188 YP_003064131.1 CDS JDM1_2548 NC_012984.1 2740938 2741288 R hypothetical protein complement(2740938..2741288) Lactobacillus plantarum JDM1 8190189 YP_003064132.1 CDS JDM1_2549 NC_012984.1 2741309 2742094 R branched-chain amino acid transport protein complement(2741309..2742094) Lactobacillus plantarum JDM1 8190190 YP_003064133.1 CDS bar NC_012984.1 2742231 2742728 R phosphinothricin N-acetyltransferase complement(2742231..2742728) Lactobacillus plantarum JDM1 8190191 YP_003064134.1 CDS dacA1 NC_012984.1 2743314 2744648 R serine-type D-Ala-D-Ala carboxypeptidase complement(2743314..2744648) Lactobacillus plantarum JDM1 8190192 YP_003064135.1 CDS hpk11 NC_012984.1 2744718 2745878 R histidine protein kinase; sensor protein complement(2744718..2745878) Lactobacillus plantarum JDM1 8190193 YP_003064136.1 CDS rrp11 NC_012984.1 2745895 2746584 R response regulator complement(2745895..2746584) Lactobacillus plantarum JDM1 8190194 YP_003064137.1 CDS JDM1_2554 NC_012984.1 2746675 2747364 R hypothetical protein complement(2746675..2747364) Lactobacillus plantarum JDM1 8190195 YP_003064138.1 CDS prtM2 NC_012984.1 2747540 2748469 R peptidylprolyl isomerase complement(2747540..2748469) Lactobacillus plantarum JDM1 8190196 YP_003064139.1 CDS guaC NC_012984.1 2748738 2749889 R guanosine 5'-monophosphate oxidoreductase complement(2748738..2749889) Lactobacillus plantarum JDM1 8190197 YP_003064140.1 CDS JDM1_2557 NC_012984.1 2750175 2750900 R hypothetical protein complement(2750175..2750900) Lactobacillus plantarum JDM1 8190198 YP_003064141.1 CDS JDM1_2558 NC_012984.1 2750922 2752022 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(2750922..2752022) Lactobacillus plantarum JDM1 8190199 YP_003064142.1 CDS JDM1_2559 NC_012984.1 2752053 2752244 R hypothetical protein complement(2752053..2752244) Lactobacillus plantarum JDM1 8190200 YP_003064143.1 CDS parB1 NC_012984.1 2752269 2753159 R chromosome partitioning protein, DNA-binding protein complement(2752269..2753159) Lactobacillus plantarum JDM1 8190201 YP_003064144.1 CDS parA NC_012984.1 2753149 2753916 R chromosome partitioning protein, membrane-associated ATPase complement(2753149..2753916) Lactobacillus plantarum JDM1 8190202 YP_003064145.1 CDS parB2 NC_012984.1 2753919 2754770 R chromosome partitioning protein, DNA-binding protein complement(2753919..2754770) Lactobacillus plantarum JDM1 8190203 YP_003064146.1 CDS gidB NC_012984.1 2754788 2755522 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(2754788..2755522) Lactobacillus plantarum JDM1 8190204 YP_003064147.1 CDS nupC NC_012984.1 2755863 2757146 R nucleoside transport protein complement(2755863..2757146) Lactobacillus plantarum JDM1 8190205 YP_003064148.1 CDS JDM1_2565 NC_012984.1 2757506 2759284 R hypothetical protein complement(2757506..2759284) Lactobacillus plantarum JDM1 8190206 YP_003064149.1 CDS JDM1_2566 NC_012984.1 2760075 2760908 D hypothetical protein 2760075..2760908 Lactobacillus plantarum JDM1 8190207 YP_003064150.1 CDS JDM1_2567 NC_012984.1 2761480 2762376 R transcription regulator complement(2761480..2762376) Lactobacillus plantarum JDM1 8190208 YP_003064151.1 CDS JDM1_2568 NC_012984.1 2762517 2763743 D aminotransferase 2762517..2763743 Lactobacillus plantarum JDM1 8190209 YP_003064152.1 CDS JDM1_2569 NC_012984.1 2764111 2764914 D amino acid ABC transporter substrate-binding protein 2764111..2764914 Lactobacillus plantarum JDM1 8190210 YP_003064153.1 CDS JDM1_2570 NC_012984.1 2764983 2765690 D amino acid ABC transporter permease 2764983..2765690 Lactobacillus plantarum JDM1 8190211 YP_003064154.1 CDS JDM1_2571 NC_012984.1 2765702 2766463 D amino acid ABC transporter ATP-binding protein 2765702..2766463 Lactobacillus plantarum JDM1 8190212 YP_003064155.1 CDS JDM1_2572 NC_012984.1 2767061 2767750 D amino acid ABC transporter substrate-binding protein 2767061..2767750 Lactobacillus plantarum JDM1 8190213 YP_003064156.1 CDS JDM1_2573 NC_012984.1 2767919 2768494 R hypothetical protein complement(2767919..2768494) Lactobacillus plantarum JDM1 8190214 YP_003064157.1 CDS JDM1_2574 NC_012984.1 2768856 2769173 D transcription regulator () 2768856..2769173 Lactobacillus plantarum JDM1 8190215 YP_003064158.1 CDS JDM1_2575 NC_012984.1 2769170 2769808 D hypothetical protein 2769170..2769808 Lactobacillus plantarum JDM1 8190216 YP_003064159.1 CDS JDM1_2576 NC_012984.1 2769792 2770727 D hypothetical protein 2769792..2770727 Lactobacillus plantarum JDM1 8190217 YP_003064160.1 CDS pts24BCA NC_012984.1 2770813 2772738 R sucrose PTS, EIIBCA complement(2770813..2772738) Lactobacillus plantarum JDM1 8190218 YP_003064161.1 CDS agl4 NC_012984.1 2772731 2774398 R alpha-glucosidase complement(2772731..2774398) Lactobacillus plantarum JDM1 8190219 YP_003064162.1 CDS JDM1_2579 NC_012984.1 2774452 2775453 R transcription regulator complement(2774452..2775453) Lactobacillus plantarum JDM1 8190220 YP_003064163.1 CDS JDM1_2580 NC_012984.1 2775711 2776796 R hypothetical protein complement(2775711..2776796) Lactobacillus plantarum JDM1 8190221 YP_003064164.1 CDS JDM1_2581 NC_012984.1 2776872 2777627 R transport protein complement(2776872..2777627) Lactobacillus plantarum JDM1 8190222 YP_003064165.1 CDS JDM1_2582 NC_012984.1 2777624 2778274 R ABC transporter ATP-binding protein complement(2777624..2778274) Lactobacillus plantarum JDM1 8190223 YP_003064166.1 CDS JDM1_2583 NC_012984.1 2778423 2779868 D RNA methyltransferase 2778423..2779868 Lactobacillus plantarum JDM1 8189113 YP_003064167.1 CDS JDM1_2584 NC_012984.1 2779907 2780350 D hypothetical protein 2779907..2780350 Lactobacillus plantarum JDM1 8189114 YP_003064168.1 CDS JDM1_2585 NC_012984.1 2780620 2781669 R metal-dependent hydrolase () complement(2780620..2781669) Lactobacillus plantarum JDM1 8189115 YP_003064169.1 CDS pts27BCA NC_012984.1 2781691 2783640 R beta-glucosides PTS, EIIBCA complement(2781691..2783640) Lactobacillus plantarum JDM1 8189116 YP_003064170.1 CDS JDM1_2587 NC_012984.1 2783730 2784971 R hypothetical protein complement(2783730..2784971) Lactobacillus plantarum JDM1 8189117 YP_003064171.1 CDS JDM1_2588 NC_012984.1 2784972 2786198 R hypothetical protein complement(2784972..2786198) Lactobacillus plantarum JDM1 8189118 YP_003064172.1 CDS JDM1_2589 NC_012984.1 2786355 2787227 D transcription regulator 2786355..2787227 Lactobacillus plantarum JDM1 8189119 YP_003064173.1 CDS JDM1_2590 NC_012984.1 2787582 2788433 D hypothetical protein 2787582..2788433 Lactobacillus plantarum JDM1 8189120 YP_003064174.1 CDS JDM1_2591 NC_012984.1 2788548 2789261 R HAD superfamily hydrolase complement(2788548..2789261) Lactobacillus plantarum JDM1 8189121 YP_003064175.1 CDS sacK2 NC_012984.1 2789544 2790407 R fructokinase complement(2789544..2790407) Lactobacillus plantarum JDM1 8189122 YP_003064176.1 CDS JDM1_2593 NC_012984.1 2790411 2792969 R alpha-mannosidase complement(2790411..2792969) Lactobacillus plantarum JDM1 8189123 YP_003064177.1 CDS JDM1_2594 NC_012984.1 2793123 2794223 R phosphotransferase system fructose-specific component IIA complement(2793123..2794223) Lactobacillus plantarum JDM1 8189124 YP_003064178.1 CDS JDM1_2595 NC_012984.1 2794256 2794576 R hypothetical protein complement(2794256..2794576) Lactobacillus plantarum JDM1 8189125 YP_003064179.1 CDS JDM1_2596 NC_012984.1 2794593 2795054 R hypothetical protein complement(2794593..2795054) Lactobacillus plantarum JDM1 8189126 YP_003064180.1 CDS mtlR NC_012984.1 2795070 2796974 R transcription regulator, mannitol operon complement(2795070..2796974) Lactobacillus plantarum JDM1 8189127 YP_003064181.1 CDS JDM1_2598 NC_012984.1 2797333 2797791 R hypothetical protein complement(2797333..2797791) Lactobacillus plantarum JDM1 8189128 YP_003064182.1 CDS JDM1_2599 NC_012984.1 2797885 2798748 R oxidoreductase complement(2797885..2798748) Lactobacillus plantarum JDM1 8189129 YP_003064183.1 CDS pts28ABC NC_012984.1 2798965 2801004 R beta-glucosides PTS, EIIABC complement(2798965..2801004) Lactobacillus plantarum JDM1 8189130 YP_003064184.1 CDS nth2 NC_012984.1 2801214 2801882 R DNA-(apurinic or apyrimidinic site) lyase complement(2801214..2801882) Lactobacillus plantarum JDM1 8189131 YP_003064185.1 CDS JDM1_2602 NC_012984.1 2801998 2802255 R hypothetical protein complement(2801998..2802255) Lactobacillus plantarum JDM1 8189132 YP_003064186.1 CDS JDM1_2603 NC_012984.1 2802290 2802841 R oxidoreductase () complement(2802290..2802841) Lactobacillus plantarum JDM1 8189133 YP_003064187.1 CDS JDM1_2604 NC_012984.1 2802912 2803007 R hypothetical protein complement(2802912..2803007) Lactobacillus plantarum JDM1 8189134 YP_003064188.1 CDS JDM1_2605 NC_012984.1 2803224 2804498 D hypothetical protein 2803224..2804498 Lactobacillus plantarum JDM1 8189135 YP_003064189.1 CDS JDM1_2606 NC_012984.1 2804634 2805257 R hypothetical protein complement(2804634..2805257) Lactobacillus plantarum JDM1 8189136 YP_003064190.1 CDS fur NC_012984.1 2805423 2805905 D ferric uptake regulator 2805423..2805905 Lactobacillus plantarum JDM1 8189137 YP_003064191.1 CDS JDM1_2608 NC_012984.1 2806149 2806505 R bacteriocin immunity protein complement(2806149..2806505) Lactobacillus plantarum JDM1 8189138 YP_003064192.1 CDS JDM1_2609 NC_012984.1 2806700 2806957 R hypothetical protein complement(2806700..2806957) Lactobacillus plantarum JDM1 8189139 YP_003064193.1 CDS JDM1_2610 NC_012984.1 2806982 2807854 R 3',5'-cyclic-nucleotide phosphodiesterase complement(2806982..2807854) Lactobacillus plantarum JDM1 8189140 YP_003064194.1 CDS JDM1_2611 NC_012984.1 2808287 2808829 D acetyltransferase () 2808287..2808829 Lactobacillus plantarum JDM1 8189141 YP_003064195.1 CDS lrgA NC_012984.1 2809241 2809660 R effector of murein hydrolase () complement(2809241..2809660) Lactobacillus plantarum JDM1 8189142 YP_003064196.1 CDS lrgB NC_012984.1 2809680 2810408 R effector of murein hydrolase () complement(2809680..2810408) Lactobacillus plantarum JDM1 8189143 YP_003064197.1 CDS JDM1_2614 NC_012984.1 2810583 2811422 R DegV family protein complement(2810583..2811422) Lactobacillus plantarum JDM1 8189144 YP_003064198.1 CDS JDM1_2615 NC_012984.1 2812282 2812980 D zinc-dependent proteinase () 2812282..2812980 Lactobacillus plantarum JDM1 8189145 YP_003064199.1 CDS crtN NC_012984.1 2813587 2814825 D squalene synthase 2813587..2814825 Lactobacillus plantarum JDM1 8189146 YP_003064200.1 CDS crtM NC_012984.1 2815064 2815945 D phytoene synthase 2815064..2815945 Lactobacillus plantarum JDM1 8189147 YP_003064201.1 CDS JDM1_2618 NC_012984.1 2816307 2817248 D cell surface hydrolase, membrane-bound () 2816307..2817248 Lactobacillus plantarum JDM1 8189148 YP_003064202.1 CDS glyK NC_012984.1 2817315 2818427 R glycerate kinase complement(2817315..2818427) Lactobacillus plantarum JDM1 8189149 YP_003064203.1 CDS gshR4 NC_012984.1 2818563 2819897 D glutathione reductase 2818563..2819897 Lactobacillus plantarum JDM1 8189150 YP_003064204.1 CDS JDM1_2621 NC_012984.1 2820080 2820421 D hypothetical protein 2820080..2820421 Lactobacillus plantarum JDM1 8189151 YP_003064205.1 CDS isp2 NC_012984.1 2820577 2822247 R transposase complement(2820577..2822247) Lactobacillus plantarum JDM1 8189152 YP_003064206.1 CDS purB NC_012984.1 2822413 2823711 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(2822413..2823711) Lactobacillus plantarum JDM1 8189153 YP_003064207.1 CDS purA NC_012984.1 2824028 2825317 D adenylosuccinate synthetase 2824028..2825317 Lactobacillus plantarum JDM1 8189154 YP_003064208.1 CDS guaC NC_012984.1 2825360 2826337 D guanosine 5'-monophosphate oxidoreductase 2825360..2826337 Lactobacillus plantarum JDM1 8189155 YP_003064209.1 CDS ptp2 NC_012984.1 2826492 2827277 D protein-tyrosine-phosphatase 2826492..2827277 Lactobacillus plantarum JDM1 8189156 YP_003064210.1 CDS cls NC_012984.1 2827357 2828814 R cardiolipin synthetase 2 complement(2827357..2828814) Lactobacillus plantarum JDM1 8189157 YP_003064211.1 CDS JDM1_2628 NC_012984.1 2829547 2830221 D hypothetical protein 2829547..2830221 Lactobacillus plantarum JDM1 8189158 YP_003064212.1 CDS JDM1_2629 NC_012984.1 2830331 2832205 D hypothetical protein 2830331..2832205 Lactobacillus plantarum JDM1 8189159 YP_003064213.1 CDS JDM1_2630 NC_012984.1 2833050 2833532 R hypothetical protein complement(2833050..2833532) Lactobacillus plantarum JDM1 8189160 YP_003064214.1 CDS JDM1_2631 NC_012984.1 2833660 2833728 D hypothetical protein 2833660..2833728 Lactobacillus plantarum JDM1 8189161 YP_003064215.1 CDS JDM1_2632 NC_012984.1 2834423 2835847 D amino acid transport protein 2834423..2835847 Lactobacillus plantarum JDM1 8189162 YP_003064216.1 CDS kup2 NC_012984.1 2836109 2838151 D potassium uptake protein 2836109..2838151 Lactobacillus plantarum JDM1 8189163 YP_003064217.1 CDS JDM1_2634 NC_012984.1 2838224 2839168 R cation efflux protein complement(2838224..2839168) Lactobacillus plantarum JDM1 8189164 YP_003064218.1 CDS JDM1_2635 NC_012984.1 2839497 2840543 R transport protein complement(2839497..2840543) Lactobacillus plantarum JDM1 8189165 YP_003064219.1 CDS JDM1_2636 NC_012984.1 2841004 2842122 D hypothetical protein 2841004..2842122 Lactobacillus plantarum JDM1 8189166 YP_003064220.1 CDS qacC NC_012984.1 2842210 2842593 R quaternary ammonium compound-resistance protein complement(2842210..2842593) Lactobacillus plantarum JDM1 8189167 YP_003064221.1 CDS qacH NC_012984.1 2842608 2842916 R quaternary ammonium compound-resistance protein complement(2842608..2842916) Lactobacillus plantarum JDM1 8189168 YP_003064222.1 CDS hly NC_012984.1 2843266 2843913 R hemolysin III complement(2843266..2843913) Lactobacillus plantarum JDM1 8189169 YP_003064223.1 CDS JDM1_2640 NC_012984.1 2844171 2844515 R transcription regulator complement(2844171..2844515) Lactobacillus plantarum JDM1 8189170 YP_003064224.1 CDS JDM1_2641 NC_012984.1 2844654 2845541 D cation efflux protein 2844654..2845541 Lactobacillus plantarum JDM1 8189171 YP_003064225.1 CDS JDM1_2642 NC_012984.1 2845727 2846365 R transcription regulator complement(2845727..2846365) Lactobacillus plantarum JDM1 8189172 YP_003064226.1 CDS JDM1_2643 NC_012984.1 2846443 2846682 R hypothetical protein complement(2846443..2846682) Lactobacillus plantarum JDM1 8189173 YP_003064227.1 CDS JDM1_2644 NC_012984.1 2847186 2847353 D hypothetical protein 2847186..2847353 Lactobacillus plantarum JDM1 8189174 YP_003064228.1 CDS tag3 NC_012984.1 2847687 2848235 R DNA-3-methyladenine glycosylase I complement(2847687..2848235) Lactobacillus plantarum JDM1 8189175 YP_003064229.1 CDS JDM1_2646 NC_012984.1 2848207 2848998 R dihydropteroate synthase complement(2848207..2848998) Lactobacillus plantarum JDM1 8189176 YP_003064230.1 CDS xtp2 NC_012984.1 2849380 2849967 R xanthosine triphosphate pyrophosphatase complement(2849380..2849967) Lactobacillus plantarum JDM1 8189177 YP_003064231.1 CDS folC2 NC_012984.1 2849964 2851328 R folylpolyglutamate synthase complement(2849964..2851328) Lactobacillus plantarum JDM1 8189178 YP_003064232.1 CDS folE NC_012984.1 2851337 2851906 R involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I complement(2851337..2851906) Lactobacillus plantarum JDM1 8189179 YP_003064233.1 CDS folK NC_012984.1 2851899 2852411 R 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(2851899..2852411) Lactobacillus plantarum JDM1 8189180 YP_003064234.1 CDS folB NC_012984.1 2852401 2852769 R dihydroneopterin aldolase complement(2852401..2852769) Lactobacillus plantarum JDM1 8189181 YP_003064235.1 CDS JDM1_2652 NC_012984.1 2852816 2852968 D hypothetical protein 2852816..2852968 Lactobacillus plantarum JDM1 8189182 YP_003064236.1 CDS JDM1_2653 NC_012984.1 2852994 2853527 R hypothetical protein complement(2852994..2853527) Lactobacillus plantarum JDM1 8189183 YP_003064237.1 CDS JDM1_2654 NC_012984.1 2853698 2854606 D ABC transporter substrate-binding protein 2853698..2854606 Lactobacillus plantarum JDM1 8189184 YP_003064238.1 CDS JDM1_2655 NC_012984.1 2854826 2856241 R multidrug transport protein () complement(2854826..2856241) Lactobacillus plantarum JDM1 8189185 YP_003064239.1 CDS JDM1_2656 NC_012984.1 2856599 2856868 R hypothetical protein complement(2856599..2856868) Lactobacillus plantarum JDM1 8189186 YP_003064240.1 CDS JDM1_2657 NC_012984.1 2862725 2863240 D hypothetical protein 2862725..2863240 Lactobacillus plantarum JDM1 8189190 YP_003064241.1 CDS JDM1_2658 NC_012984.1 2863408 2864397 R esterase complement(2863408..2864397) Lactobacillus plantarum JDM1 8189191 YP_003064242.1 CDS pflB2 NC_012984.1 2864815 2867073 D formate C-acetyltransferase 2864815..2867073 Lactobacillus plantarum JDM1 8189192 YP_003064243.1 CDS pflA2 NC_012984.1 2867110 2867931 D formate acetyltransferase activating enzyme 2867110..2867931 Lactobacillus plantarum JDM1 8189193 YP_003064244.1 CDS JDM1_2662 NC_012984.1 2867947 2868171 D hypothetical protein 2867947..2868171 Lactobacillus plantarum JDM1 8189194 YP_003064245.1 CDS JDM1_2661 NC_012984.1 2868154 2868465 R hypothetical protein complement(2868154..2868465) Lactobacillus plantarum JDM1 8188478 YP_003064246.1 CDS JDM1_2663 NC_012984.1 2869524 2870444 D oxidoreductase 2869524..2870444 Lactobacillus plantarum JDM1 8188477 YP_003064247.1 CDS JDM1_2664 NC_012984.1 2870614 2871138 D hypothetical protein 2870614..2871138 Lactobacillus plantarum JDM1 8188479 YP_003064248.1 CDS JDM1_2665 NC_012984.1 2871233 2871484 R hypothetical protein complement(2871233..2871484) Lactobacillus plantarum JDM1 8188480 YP_003064249.1 CDS JDM1_2666 NC_012984.1 2871651 2872079 D hypothetical protein 2871651..2872079 Lactobacillus plantarum JDM1 8188481 YP_003064250.1 CDS JDM1_2667 NC_012984.1 2872182 2872823 R hypothetical protein complement(2872182..2872823) Lactobacillus plantarum JDM1 8188482 YP_003064251.1 CDS JDM1_2668 NC_012984.1 2873838 2875505 R glycine betaine/carnitine/choline transport protein complement(2873838..2875505) Lactobacillus plantarum JDM1 8188483 YP_003064252.1 CDS cadA NC_012984.1 2876274 2878118 D cadmium-/zinc-/cobalt-transporting ATPase 2876274..2878118 Lactobacillus plantarum JDM1 8188484 YP_003064253.1 CDS JDM1_2670 NC_012984.1 2878444 2879112 R hypothetical protein complement(2878444..2879112) Lactobacillus plantarum JDM1 8188485 YP_003064254.1 CDS JDM1_2671 NC_012984.1 2879599 2880783 D hypothetical protein 2879599..2880783 Lactobacillus plantarum JDM1 8188486 YP_003064255.1 CDS adeC NC_012984.1 2880947 2882638 R adenine deaminase complement(2880947..2882638) Lactobacillus plantarum JDM1 8188487 YP_003064256.1 CDS JDM1_2673 NC_012984.1 2883266 2884366 D hypothetical protein 2883266..2884366 Lactobacillus plantarum JDM1 8188488 YP_003064257.1 CDS JDM1_2674 NC_012984.1 2884427 2884732 R hypothetical protein complement(2884427..2884732) Lactobacillus plantarum JDM1 8188489 YP_003064258.1 CDS JDM1_2675 NC_012984.1 2884771 2885757 R Na(+)/H(+) antiporter complement(2884771..2885757) Lactobacillus plantarum JDM1 8188490 YP_003064259.1 CDS JDM1_2676 NC_012984.1 2885760 2886194 R Na(+)/H(+) antiporter complement(2885760..2886194) Lactobacillus plantarum JDM1 8188491 YP_003064260.1 CDS JDM1_2677 NC_012984.1 2886629 2888011 R amino acid transport protein complement(2886629..2888011) Lactobacillus plantarum JDM1 8188492 YP_003064261.1 CDS JDM1_2678 NC_012984.1 2888299 2889195 R cell surface hydrolase, membrane-bound () complement(2888299..2889195) Lactobacillus plantarum JDM1 8188493 YP_003064262.1 CDS JDM1_2679 NC_012984.1 2889403 2889903 D low temperature requirement C protein () 2889403..2889903 Lactobacillus plantarum JDM1 8188494 YP_003064263.1 CDS JDM1_2680 NC_012984.1 2890108 2890968 R hypothetical protein complement(2890108..2890968) Lactobacillus plantarum JDM1 8188495 YP_003064264.1 CDS JDM1_2681 NC_012984.1 2890973 2891392 R transcription regulator complement(2890973..2891392) Lactobacillus plantarum JDM1 8188496 YP_003064265.1 CDS nrpR4 NC_012984.1 2891563 2891967 R negative regulator of proteolysis complement(2891563..2891967) Lactobacillus plantarum JDM1 8188497 YP_003064266.1 CDS JDM1_2683 NC_012984.1 2892175 2892549 R hypothetical protein complement(2892175..2892549) Lactobacillus plantarum JDM1 8188498 YP_003064267.1 CDS JDM1_2684 NC_012984.1 2892819 2893142 R hypothetical protein complement(2892819..2893142) Lactobacillus plantarum JDM1 8188499 YP_003064268.1 CDS mutY NC_012984.1 2893232 2894332 R A/G-specific adenine glycosylase complement(2893232..2894332) Lactobacillus plantarum JDM1 8188500 YP_003064269.1 CDS JDM1_2686 NC_012984.1 2894400 2894765 R hypothetical protein complement(2894400..2894765) Lactobacillus plantarum JDM1 8188501 YP_003064270.1 CDS JDM1_2687 NC_012984.1 2894800 2895306 R hypothetical protein complement(2894800..2895306) Lactobacillus plantarum JDM1 8188502 YP_003064271.1 CDS hsp3 NC_012984.1 2895539 2895982 R small heat shock protein complement(2895539..2895982) Lactobacillus plantarum JDM1 8188503 YP_003064272.1 CDS JDM1_2689 NC_012984.1 2896078 2896416 R hypothetical protein complement(2896078..2896416) Lactobacillus plantarum JDM1 8188504 YP_003064273.1 CDS JDM1_2690 NC_012984.1 2896954 2897592 D oxidoreductase () 2896954..2897592 Lactobacillus plantarum JDM1 8188505 YP_003064274.1 CDS JDM1_2691 NC_012984.1 2897919 2898377 D acetyltransferase () 2897919..2898377 Lactobacillus plantarum JDM1 8188506 YP_003064275.1 CDS JDM1_2692 NC_012984.1 2898564 2899472 R transport protein complement(2898564..2899472) Lactobacillus plantarum JDM1 8188507 YP_003064276.1 CDS JDM1_2693 NC_012984.1 2899858 2900556 R hypothetical protein complement(2899858..2900556) Lactobacillus plantarum JDM1 8188508 YP_003064277.1 CDS JDM1_2694 NC_012984.1 2900582 2901259 R hypothetical protein complement(2900582..2901259) Lactobacillus plantarum JDM1 8188509 YP_003064278.1 CDS bsh3 NC_012984.1 2901538 2902524 R choloylglycine hydrolase complement(2901538..2902524) Lactobacillus plantarum JDM1 8188510 YP_003064279.1 CDS copB NC_012984.1 2902621 2904660 R copper transporting ATPase complement(2902621..2904660) Lactobacillus plantarum JDM1 8188511 YP_003064280.1 CDS copR NC_012984.1 2904980 2905408 R transcription regulator complement(2904980..2905408) Lactobacillus plantarum JDM1 8188512 YP_003064281.1 CDS JDM1_2698 NC_012984.1 2905606 2905878 R hypothetical protein complement(2905606..2905878) Lactobacillus plantarum JDM1 8188513 YP_003064282.1 CDS JDM1_2699 NC_012984.1 2906758 2908191 D multidrug transport protein 2906758..2908191 Lactobacillus plantarum JDM1 8188514 YP_003064283.1 CDS JDM1_2700 NC_012984.1 2908427 2908609 D hypothetical protein 2908427..2908609 Lactobacillus plantarum JDM1 8188515 YP_003064284.1 CDS JDM1_2701 NC_012984.1 2908661 2908954 D hypothetical protein 2908661..2908954 Lactobacillus plantarum JDM1 8188516 YP_003064285.1 CDS JDM1_2702 NC_012984.1 2909029 2909412 R hypothetical protein complement(2909029..2909412) Lactobacillus plantarum JDM1 8188517 YP_003064286.1 CDS JDM1_2703 NC_012984.1 2909461 2910834 R purine-cytosine transport protein complement(2909461..2910834) Lactobacillus plantarum JDM1 8188518 YP_003064287.1 CDS JDM1_2704 NC_012984.1 2910979 2911587 D transport protein 2910979..2911587 Lactobacillus plantarum JDM1 8188519 YP_003064288.1 CDS JDM1_2705 NC_012984.1 2911758 2912696 R cell surface hydrolase, membrane-bound () complement(2911758..2912696) Lactobacillus plantarum JDM1 8188520 YP_003064289.1 CDS JDM1_2706 NC_012984.1 2912821 2913291 R hypothetical protein complement(2912821..2913291) Lactobacillus plantarum JDM1 8188521 YP_003064290.1 CDS JDM1_2707 NC_012984.1 2914099 2914353 R hypothetical protein complement(2914099..2914353) Lactobacillus plantarum JDM1 8188522 YP_003064291.1 CDS JDM1_2708 NC_012984.1 2914381 2914854 D hypothetical protein 2914381..2914854 Lactobacillus plantarum JDM1 8188523 YP_003064292.1 CDS pacL3 NC_012984.1 2914942 2917554 R cation transporting P-type ATPase complement(2914942..2917554) Lactobacillus plantarum JDM1 8188524 YP_003064293.1 CDS JDM1_2710 NC_012984.1 2917796 2919346 D 2',3'-cyclic-nucleotide 2'-phosphodiesterase 2917796..2919346 Lactobacillus plantarum JDM1 8188525 YP_003064294.1 CDS JDM1_2711 NC_012984.1 2919548 2920480 R transport protein complement(2919548..2920480) Lactobacillus plantarum JDM1 8188526 YP_003064295.1 CDS JDM1_2712 NC_012984.1 2920743 2921603 R oxidoreductase complement(2920743..2921603) Lactobacillus plantarum JDM1 8188527 YP_003064296.1 CDS JDM1_2713 NC_012984.1 2921744 2922496 D hypothetical protein 2921744..2922496 Lactobacillus plantarum JDM1 8188528 YP_003064297.1 CDS JDM1_2714 NC_012984.1 2922509 2922970 D hypothetical protein 2922509..2922970 Lactobacillus plantarum JDM1 8188529 YP_003064298.1 CDS uppP NC_012984.1 2923220 2924047 R BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase complement(2923220..2924047) Lactobacillus plantarum JDM1 8188530 YP_003064299.1 CDS JDM1_2716 NC_012984.1 2924195 2924713 R hypothetical protein complement(2924195..2924713) Lactobacillus plantarum JDM1 8188531 YP_003064300.1 CDS JDM1_2717 NC_012984.1 2924715 2925329 R transcription regulator () complement(2924715..2925329) Lactobacillus plantarum JDM1 8188532 YP_003064301.1 CDS JDM1_2718 NC_012984.1 2925319 2925642 R hypothetical protein complement(2925319..2925642) Lactobacillus plantarum JDM1 8188533 YP_003064302.1 CDS JDM1_2719 NC_012984.1 2925891 2926859 D hypothetical protein 2925891..2926859 Lactobacillus plantarum JDM1 8188534 YP_003064303.1 CDS JDM1_2720 NC_012984.1 2926956 2927879 R hypothetical protein complement(2926956..2927879) Lactobacillus plantarum JDM1 8188535 YP_003064304.1 CDS pck NC_012984.1 2927878 2929083 D phosphoenolpyruvate carboxykinase (ATP) 2927878..2929083 Lactobacillus plantarum JDM1 8188536 YP_003064305.1 CDS JDM1_2722 NC_012984.1 2929185 2929382 D hypothetical protein 2929185..2929382 Lactobacillus plantarum JDM1 8188537 YP_003064306.1 CDS gadB NC_012984.1 2929549 2930958 D glutamate decarboxylase 2929549..2930958 Lactobacillus plantarum JDM1 8188538 YP_003064307.1 CDS JDM1_2724 NC_012984.1 2931090 2932202 R gamma-D-glutamate-meso-diaminopimelate muropeptidase complement(2931090..2932202) Lactobacillus plantarum JDM1 8188539 YP_003064308.1 CDS JDM1_2725 NC_012984.1 2932482 2932826 R hypothetical protein complement(2932482..2932826) Lactobacillus plantarum JDM1 8188540 YP_003064309.1 CDS JDM1_2726 NC_012984.1 2932933 2933304 D hypothetical protein 2932933..2933304 Lactobacillus plantarum JDM1 8188541 YP_003064310.1 CDS JDM1_2727 NC_012984.1 2933992 2934573 R hypothetical protein complement(2933992..2934573) Lactobacillus plantarum JDM1 8188543 YP_003064311.1 CDS JDM1_2728 NC_012984.1 2934801 2935214 R hypothetical protein complement(2934801..2935214) Lactobacillus plantarum JDM1 8188544 YP_003064312.1 CDS JDM1_2729 NC_012984.1 2935502 2936095 R hypothetical protein complement(2935502..2936095) Lactobacillus plantarum JDM1 8188545 YP_003064313.1 CDS JDM1_2730 NC_012984.1 2936117 2936428 R hypothetical protein complement(2936117..2936428) Lactobacillus plantarum JDM1 8188546 YP_003064314.1 CDS JDM1_2731 NC_012984.1 2936442 2937443 R hypothetical protein complement(2936442..2937443) Lactobacillus plantarum JDM1 8188547 YP_003064315.1 CDS JDM1_2732 NC_012984.1 2937563 2938141 D hypothetical protein 2937563..2938141 Lactobacillus plantarum JDM1 8188548 YP_003064316.1 CDS JDM1_2733 NC_012984.1 2938302 2939255 D iron dependent peroxidase () 2938302..2939255 Lactobacillus plantarum JDM1 8188549 YP_003064317.1 CDS ubiE NC_012984.1 2939523 2940236 D Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 2939523..2940236 Lactobacillus plantarum JDM1 8188550 YP_003064318.1 CDS JDM1_2735 NC_012984.1 2940237 2940932 D hypothetical protein 2940237..2940932 Lactobacillus plantarum JDM1 8188551 YP_003064319.1 CDS JDM1_2736 NC_012984.1 2941030 2942001 R hypothetical protein complement(2941030..2942001) Lactobacillus plantarum JDM1 8188552 YP_003064320.1 CDS cadA NC_012984.1 2942951 2944855 D cadmium transporting P-type ATPase 2942951..2944855 Lactobacillus plantarum JDM1 8188553 YP_003064321.1 CDS glpF5 NC_012984.1 2945008 2945760 R glycerol uptake facilitator protein complement(2945008..2945760) Lactobacillus plantarum JDM1 8188554 YP_003064322.1 CDS trxA3 NC_012984.1 2946145 2946465 D thioredoxin 2946145..2946465 Lactobacillus plantarum JDM1 8188555 YP_003064323.1 CDS JDM1_2740 NC_012984.1 2946489 2946758 D hypothetical protein 2946489..2946758 Lactobacillus plantarum JDM1 8188556 YP_003064324.1 CDS JDM1_2741 NC_012984.1 2946858 2947061 R hypothetical protein complement(2946858..2947061) Lactobacillus plantarum JDM1 8188557 YP_003064325.1 CDS JDM1_2742 NC_012984.1 2947190 2947741 R stress induced DNA binding protein () complement(2947190..2947741) Lactobacillus plantarum JDM1 8188558 YP_003064326.1 CDS JDM1_2743 NC_012984.1 2947754 2947978 R hypothetical protein complement(2947754..2947978) Lactobacillus plantarum JDM1 8187524 YP_003064327.1 CDS JDM1_2744 NC_012984.1 2948176 2948841 D transcription regulator 2948176..2948841 Lactobacillus plantarum JDM1 8187904 YP_003064328.1 CDS pepO NC_012984.1 2949150 2951066 D endopeptidase PepO 2949150..2951066 Lactobacillus plantarum JDM1 8187905 YP_003064329.1 CDS JDM1_2746 NC_012984.1 2951176 2951367 R hypothetical protein complement(2951176..2951367) Lactobacillus plantarum JDM1 8187906 YP_003064330.1 CDS JDM1_2747 NC_012984.1 2952196 2952693 D hypothetical protein 2952196..2952693 Lactobacillus plantarum JDM1 8187907 YP_003064331.1 CDS nox5 NC_012984.1 2952752 2954104 R NADH oxidase complement(2952752..2954104) Lactobacillus plantarum JDM1 8187908 YP_003064332.1 CDS JDM1_2749 NC_012984.1 2954421 2956571 R hypothetical protein complement(2954421..2956571) Lactobacillus plantarum JDM1 8187909 YP_003064333.1 CDS JDM1_2750 NC_012984.1 2956593 2957606 R cell surface protein precursor complement(2956593..2957606) Lactobacillus plantarum JDM1 8187910 YP_003064334.1 CDS JDM1_2751 NC_012984.1 2957704 2958396 R hypothetical protein complement(2957704..2958396) Lactobacillus plantarum JDM1 8187911 YP_003064335.1 CDS JDM1_2752 NC_012984.1 2958434 2959006 R hypothetical protein complement(2958434..2959006) Lactobacillus plantarum JDM1 8187912 YP_003064336.1 CDS JDM1_2753 NC_012984.1 2959003 2959281 R hypothetical protein complement(2959003..2959281) Lactobacillus plantarum JDM1 8187913 YP_003064337.1 CDS JDM1_2754 NC_012984.1 2959943 2960530 D transcription regulator () 2959943..2960530 Lactobacillus plantarum JDM1 8187914 YP_003064338.1 CDS JDM1_2755 NC_012984.1 2960658 2960957 R hypothetical protein complement(2960658..2960957) Lactobacillus plantarum JDM1 8187915 YP_003064339.1 CDS JDM1_2756 NC_012984.1 2960959 2962296 R hypothetical protein complement(2960959..2962296) Lactobacillus plantarum JDM1 8187916 YP_003064340.1 CDS JDM1_2757 NC_012984.1 2962314 2963507 R hypothetical protein complement(2962314..2963507) Lactobacillus plantarum JDM1 8187917 YP_003064341.1 CDS glpF6 NC_012984.1 2963893 2964543 D glycerol uptake facilitator protein 2963893..2964543 Lactobacillus plantarum JDM1 8187918 YP_003064342.1 CDS JDM1_2759 NC_012984.1 2964755 2966491 R protein kinase complement(2964755..2966491) Lactobacillus plantarum JDM1 8187919 YP_003064343.1 CDS brnQ3 NC_012984.1 2966987 2968378 D branched-chain amino acid transport protein 2966987..2968378 Lactobacillus plantarum JDM1 8187920 YP_003064344.1 CDS lacS1 NC_012984.1 2968522 2970468 R lactose transport protein complement(2968522..2970468) Lactobacillus plantarum JDM1 8187921 YP_003064345.1 CDS lacA NC_012984.1 2970487 2972538 R beta-galactosidase I complement(2970487..2972538) Lactobacillus plantarum JDM1 8187922 YP_003064346.1 CDS lacR NC_012984.1 2972785 2973795 D transcription regulator of beta-galactosidase gene 2972785..2973795 Lactobacillus plantarum JDM1 8187923 YP_003064347.1 CDS ram1 NC_012984.1 2973890 2975848 R alpha-L-rhamnosidase complement(2973890..2975848) Lactobacillus plantarum JDM1 8187924 YP_003064348.1 CDS JDM1_2765 NC_012984.1 2975925 2977205 R sugar transport protein complement(2975925..2977205) Lactobacillus plantarum JDM1 8187925 YP_003064349.1 CDS ram2 NC_012984.1 2977220 2978806 R alpha-L-rhamnosidase complement(2977220..2978806) Lactobacillus plantarum JDM1 8187926 YP_003064350.1 CDS JDM1_2767 NC_012984.1 2978827 2980104 R sugar transport protein complement(2978827..2980104) Lactobacillus plantarum JDM1 8187927 YP_003064351.1 CDS JDM1_2768 NC_012984.1 2980238 2981224 D transcription regulator 2980238..2981224 Lactobacillus plantarum JDM1 8187928 YP_003064352.1 CDS fic NC_012984.1 2981314 2981946 R cell filamentation protein Fic complement(2981314..2981946) Lactobacillus plantarum JDM1 8187929 YP_003064353.1 CDS JDM1_2770 NC_012984.1 2981943 2982530 R transcription regulator complement(2981943..2982530) Lactobacillus plantarum JDM1 8187930 YP_003064354.1 CDS galR1 NC_012984.1 2982628 2983635 R galactose operon repressor complement(2982628..2983635) Lactobacillus plantarum JDM1 8187931 YP_003064355.1 CDS galT NC_012984.1 2983773 2985236 R catalyzes the formation of alpha-D-glucose 1-phosphate and UDP-galactose from UDP-glucose and alpha-D-galactose 1-phosphate in galactose metabolism; galactose-1-phosphate uridylyltransferase complement(2983773..2985236) Lactobacillus plantarum JDM1 8187932 YP_003064356.1 CDS galE4 NC_012984.1 2985236 2986240 R UDP-glucose 4-epimerase complement(2985236..2986240) Lactobacillus plantarum JDM1 8187933 YP_003064357.1 CDS galK NC_012984.1 2986305 2987468 R catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase complement(2986305..2987468) Lactobacillus plantarum JDM1 8187934 YP_003064358.1 CDS lacL NC_012984.1 2987752 2989632 D beta-galactosidase, large subunit 2987752..2989632 Lactobacillus plantarum JDM1 8187935 YP_003064359.1 CDS lacM NC_012984.1 2989616 2990575 D beta-galactosidase, small subunit 2989616..2990575 Lactobacillus plantarum JDM1 8187936 YP_003064360.1 CDS melA NC_012984.1 2990675 2992891 R alpha-galactosidase complement(2990675..2992891) Lactobacillus plantarum JDM1 8187937 YP_003064361.1 CDS lacS2 NC_012984.1 2992988 2994946 R sugar transport protein complement(2992988..2994946) Lactobacillus plantarum JDM1 8187938 YP_003064362.1 CDS galM3 NC_012984.1 2995274 2996308 R aldose 1-epimerase complement(2995274..2996308) Lactobacillus plantarum JDM1 8187939 YP_003064363.1 CDS galR2 NC_012984.1 2996431 2997426 R galactose operon repressor complement(2996431..2997426) Lactobacillus plantarum JDM1 8187940 YP_003064364.1 CDS JDM1_2781 NC_012984.1 2997753 2998775 R oxidoreductase complement(2997753..2998775) Lactobacillus plantarum JDM1 8187941 YP_003064365.1 CDS JDM1_2782 NC_012984.1 2998959 2999327 D FMN-binding protein 2998959..2999327 Lactobacillus plantarum JDM1 8187942 YP_003064366.1 CDS JDM1_2783 NC_012984.1 2999392 3001683 R fumarate reductase, flavoprotein subunit precursor complement(2999392..3001683) Lactobacillus plantarum JDM1 8187943 YP_003064367.1 CDS apbE3 NC_012984.1 3001676 3002632 R thiamin biosynthesis lipoprotein ApbE complement(3001676..3002632) Lactobacillus plantarum JDM1 8187944 YP_003064368.1 CDS aroD NC_012984.1 3002666 3003424 R catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis; 3-dehydroquinate dehydratase complement(3002666..3003424) Lactobacillus plantarum JDM1 8187945 YP_003064369.1 CDS aroE NC_012984.1 3003448 3004332 R AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(3003448..3004332) Lactobacillus plantarum JDM1 8187946 YP_003064370.1 CDS JDM1_2787 NC_012984.1 3004471 3005400 D transcription regulator 3004471..3005400 Lactobacillus plantarum JDM1 8187947 YP_003064371.1 CDS JDM1_2788 NC_012984.1 3005434 3006675 R transport protein complement(3005434..3006675) Lactobacillus plantarum JDM1 8187948 YP_003064372.1 CDS aroD3 NC_012984.1 3006677 3007561 R catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(3006677..3007561) Lactobacillus plantarum JDM1 8187949 YP_003064373.1 CDS aroD4 NC_012984.1 3007579 3008463 R catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(3007579..3008463) Lactobacillus plantarum JDM1 8187950 YP_003064374.1 CDS JDM1_2791 NC_012984.1 3008551 3009390 R short-chain dehydrogenase/oxidoreductase complement(3008551..3009390) Lactobacillus plantarum JDM1 8187951 YP_003064375.1 CDS JDM1_2792 NC_012984.1 3009418 3010320 R hypothetical protein complement(3009418..3010320) Lactobacillus plantarum JDM1 8187952 YP_003064376.1 CDS JDM1_2793 NC_012984.1 3010493 3011398 D transcription regulator 3010493..3011398 Lactobacillus plantarum JDM1 8187953 YP_003064377.1 CDS JDM1_2794 NC_012984.1 3011696 3012889 D transport protein 3011696..3012889 Lactobacillus plantarum JDM1 8187954 YP_003064378.1 CDS JDM1_2795 NC_012984.1 3013012 3013383 R hypothetical protein complement(3013012..3013383) Lactobacillus plantarum JDM1 8187955 YP_003064379.1 CDS est2 NC_012984.1 3013376 3014167 R acetylesterase complement(3013376..3014167) Lactobacillus plantarum JDM1 8187956 YP_003064380.1 CDS JDM1_2797 NC_012984.1 3014197 3014928 R transcription regulator complement(3014197..3014928) Lactobacillus plantarum JDM1 8187957 YP_003064381.1 CDS pts29C NC_012984.1 3015149 3016486 D cellobiose PTS, EIIC 3015149..3016486 Lactobacillus plantarum JDM1 8187958 YP_003064382.1 CDS JDM1_2799 NC_012984.1 3016643 3017593 D catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid-6-phosphate etherase 3016643..3017593 Lactobacillus plantarum JDM1 8187959 YP_003064383.1 CDS JDM1_2800 NC_012984.1 3017590 3018513 D N-acetylglucosamine kinase 3017590..3018513 Lactobacillus plantarum JDM1 8187960 YP_003064384.1 CDS JDM1_2801 NC_012984.1 3018510 3019598 D hypothetical protein 3018510..3019598 Lactobacillus plantarum JDM1 8187961 YP_003064385.1 CDS pbg8 NC_012984.1 3019820 3021280 R 6-phospho-beta-glucosidase complement(3019820..3021280) Lactobacillus plantarum JDM1 8187962 YP_003064386.1 CDS pts30BCA NC_012984.1 3021273 3023147 R beta-glucosides PTS, EIIBCA complement(3021273..3023147) Lactobacillus plantarum JDM1 8187963 YP_003064387.1 CDS bglG4 NC_012984.1 3023271 3023933 R transcription antiterminator complement(3023271..3023933) Lactobacillus plantarum JDM1 8187964 YP_003064388.1 CDS JDM1_2805 NC_012984.1 3024362 3026110 R repressor of the frv operon, involved in phosphoenolpyruvate:sugar phosphotransferase system; frv operon regulatory protein complement(3024362..3026110) Lactobacillus plantarum JDM1 8187965 YP_003064389.1 CDS metC2 NC_012984.1 3026114 3027277 R cystathionine beta-lyase complement(3026114..3027277) Lactobacillus plantarum JDM1 8187966 YP_003064390.1 CDS pts31BC NC_012984.1 3027369 3028826 R PTS system transporter subunits IIBC complement(3027369..3028826) Lactobacillus plantarum JDM1 8187967 YP_003064391.1 CDS pts31A NC_012984.1 3028845 3029288 R with FrvBRX is part of the phosphoenolpyruvate-dependent sugar phosphotransferase system involved in the transport and phosphorylation of sugars; possibly responsible for the sugar specificity of the system; fructose-like phosphotransferase system subunit EIIA complement(3028845..3029288) Lactobacillus plantarum JDM1 8187968 YP_003064392.1 CDS pts32A NC_012984.1 3029665 3030147 R glucose PTS, EIIA complement(3029665..3030147) Lactobacillus plantarum JDM1 8187969 YP_003064393.1 CDS JDM1_2810 NC_012984.1 3030160 3031008 R transcription regulator complement(3030160..3031008) Lactobacillus plantarum JDM1 8187970 YP_003064394.1 CDS pts32BC NC_012984.1 3031046 3032542 R sucrose PTS, EIIBC complement(3031046..3032542) Lactobacillus plantarum JDM1 8187971 YP_003064395.1 CDS murQ NC_012984.1 3032557 3033447 R catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid-6-phosphate etherase complement(3032557..3033447) Lactobacillus plantarum JDM1 8187972 YP_003064396.1 CDS JDM1_2813 NC_012984.1 3033444 3034499 R hypothetical protein complement(3033444..3034499) Lactobacillus plantarum JDM1 8187973 YP_003064397.1 CDS pbg9 NC_012984.1 3034684 3036126 R 6-phospho-beta-glucosidase complement(3034684..3036126) Lactobacillus plantarum JDM1 8187974 YP_003064398.1 CDS pbg10 NC_012984.1 3036215 3037678 R 6-phospho-beta-glucosidase complement(3036215..3037678) Lactobacillus plantarum JDM1 8187975 YP_003064399.1 CDS pts33BCA NC_012984.1 3037699 3039696 R beta-glucosides PTS, EIIBCA complement(3037699..3039696) Lactobacillus plantarum JDM1 8187976 YP_003064400.1 CDS bglG5 NC_012984.1 3039867 3040718 R transcription antiterminator complement(3039867..3040718) Lactobacillus plantarum JDM1 8187977 YP_003064401.1 CDS map4 NC_012984.1 3040937 3043141 R maltose phosphorylase complement(3040937..3043141) Lactobacillus plantarum JDM1 8187978 YP_003064402.1 CDS JDM1_2819 NC_012984.1 3043389 3044366 R transcription regulator complement(3043389..3044366) Lactobacillus plantarum JDM1 8187979 YP_003064403.1 CDS JDM1_2820 NC_012984.1 3044536 3045957 D sugar transport protein 3044536..3045957 Lactobacillus plantarum JDM1 8187980 YP_003064404.1 CDS agl5 NC_012984.1 3045988 3048288 D alpha-glucosidase 3045988..3048288 Lactobacillus plantarum JDM1 8187981 YP_003064405.1 CDS bsh1 NC_012984.1 3048717 3049691 R choloylglycine hydrolase complement(3048717..3049691) Lactobacillus plantarum JDM1 8187982 YP_003064406.1 CDS JDM1_2823 NC_012984.1 3049899 3050717 R HAD superfamily hydrolase complement(3049899..3050717) Lactobacillus plantarum JDM1 8187983 YP_003064407.1 CDS tkt4 NC_012984.1 3050787 3052784 R transketolase complement(3050787..3052784) Lactobacillus plantarum JDM1 8187984 YP_003064408.1 CDS tal2 NC_012984.1 3052814 3053467 R similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase complement(3052814..3053467) Lactobacillus plantarum JDM1 8187360 YP_003064409.1 CDS ulaA NC_012984.1 3053534 3054904 R membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC complement(3053534..3054904) Lactobacillus plantarum JDM1 8188149 YP_003064410.1 CDS pts34B NC_012984.1 3054928 3055224 R PTS, EIIB complement(3054928..3055224) Lactobacillus plantarum JDM1 8188150 YP_003064411.1 CDS JDM1_2828 NC_012984.1 3055237 3055695 R hypothetical protein complement(3055237..3055695) Lactobacillus plantarum JDM1 8188151 YP_003064412.1 CDS JDM1_2829 NC_012984.1 3055866 3057917 D hypothetical protein 3055866..3057917 Lactobacillus plantarum JDM1 8188152 YP_003064413.1 CDS gph3 NC_012984.1 3058057 3058680 R phosphoglycolate phosphatase () complement(3058057..3058680) Lactobacillus plantarum JDM1 8188153 YP_003064414.1 CDS gutB NC_012984.1 3058786 3059844 R L-iditol 2-dehydrogenase complement(3058786..3059844) Lactobacillus plantarum JDM1 8188154 YP_003064415.1 CDS JDM1_2832 NC_012984.1 3059925 3061196 R galactitol PTS, EIIC complement(3059925..3061196) Lactobacillus plantarum JDM1 8188155 YP_003064416.1 CDS pts35B NC_012984.1 3061231 3061527 R galactitol PTS, EIIB complement(3061231..3061527) Lactobacillus plantarum JDM1 8188156 YP_003064417.1 CDS pts35A NC_012984.1 3061562 3062032 R galactitol PTS, EIIA complement(3061562..3062032) Lactobacillus plantarum JDM1 8188157 YP_003064418.1 CDS JDM1_2835 NC_012984.1 3062356 3063123 D transcription regulator 3062356..3063123 Lactobacillus plantarum JDM1 8188158 YP_003064419.1 CDS xpk2 NC_012984.1 3063271 3065682 D phosphoketolase 3063271..3065682 Lactobacillus plantarum JDM1 8188159 YP_003064420.1 CDS JDM1_2837 NC_012984.1 3065762 3066160 R hypothetical protein complement(3065762..3066160) Lactobacillus plantarum JDM1 8188160 YP_003064421.1 CDS maa3 NC_012984.1 3066242 3066802 R maltose O-acetyltransferase complement(3066242..3066802) Lactobacillus plantarum JDM1 8188161 YP_003064422.1 CDS araA NC_012984.1 3066883 3068307 R catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase complement(3066883..3068307) Lactobacillus plantarum JDM1 8188162 YP_003064423.1 CDS araD NC_012984.1 3068360 3069088 R catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase complement(3068360..3069088) Lactobacillus plantarum JDM1 8188163 YP_003064424.1 CDS araB NC_012984.1 3069106 3070707 R L-ribulokinase () complement(3069106..3070707) Lactobacillus plantarum JDM1 8188164 YP_003064425.1 CDS araT NC_012984.1 3070724 3072124 R arabinose transport protein complement(3070724..3072124) Lactobacillus plantarum JDM1 8188165 YP_003064426.1 CDS araR NC_012984.1 3072419 3073495 R arabinose operon repressor complement(3072419..3073495) Lactobacillus plantarum JDM1 8188166 YP_003064427.1 CDS JDM1_2844 NC_012984.1 3073854 3074675 D transcription regulator 3073854..3074675 Lactobacillus plantarum JDM1 8188167 YP_003064428.1 CDS JDM1_2845 NC_012984.1 3074724 3075131 R hypothetical protein complement(3074724..3075131) Lactobacillus plantarum JDM1 8188168 YP_003064429.1 CDS JDM1_2846 NC_012984.1 3075141 3075977 R lipase/esterase complement(3075141..3075977) Lactobacillus plantarum JDM1 8188169 YP_003064430.1 CDS JDM1_2847 NC_012984.1 3075990 3076826 R lipase/esterase complement(3075990..3076826) Lactobacillus plantarum JDM1 8188170 YP_003064431.1 CDS JDM1_2848 NC_012984.1 3077004 3078512 R transport protein complement(3077004..3078512) Lactobacillus plantarum JDM1 8188171 YP_003064432.1 CDS napA4 NC_012984.1 3078509 3079705 R Na(+)/H(+) antiporter complement(3078509..3079705) Lactobacillus plantarum JDM1 8188172 YP_003064433.1 CDS JDM1_2850 NC_012984.1 3079720 3080451 R hypothetical protein complement(3079720..3080451) Lactobacillus plantarum JDM1 8188173 YP_003064434.1 CDS JDM1_2851 NC_012984.1 3080657 3081520 R sugar kinase and transcription regulator complement(3080657..3081520) Lactobacillus plantarum JDM1 8188174 YP_003064435.1 CDS nanA NC_012984.1 3081793 3082671 D catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid; N-acetylneuraminate lyase 3081793..3082671 Lactobacillus plantarum JDM1 8188175 YP_003064436.1 CDS JDM1_2853 NC_012984.1 3082705 3083391 D Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; N-acetylmannosamine-6-phosphate 2-epimerase 3082705..3083391 Lactobacillus plantarum JDM1 8188176 YP_003064437.1 CDS JDM1_2854 NC_012984.1 3083530 3084735 R oxidoreductase complement(3083530..3084735) Lactobacillus plantarum JDM1 8188177 YP_003064438.1 CDS JDM1_2856 NC_012984.1 3085194 3085574 D hypothetical protein 3085194..3085574 Lactobacillus plantarum JDM1 8188178 YP_003064439.1 CDS JDM1_2855 NC_012984.1 3085539 3085733 R hypothetical protein complement(3085539..3085733) Lactobacillus plantarum JDM1 8188180 YP_003064440.1 CDS JDM1_2857 NC_012984.1 3085770 3086318 R hypothetical protein complement(3085770..3086318) Lactobacillus plantarum JDM1 8188179 YP_003064441.1 CDS JDM1_2858 NC_012984.1 3086664 3086981 R hypothetical protein complement(3086664..3086981) Lactobacillus plantarum JDM1 8188181 YP_003064442.1 CDS kat NC_012984.1 3087255 3088709 D catalase 3087255..3088709 Lactobacillus plantarum JDM1 8188182 YP_003064443.1 CDS nrpR5 NC_012984.1 3088867 3089304 R negative regulator of proteolysis complement(3088867..3089304) Lactobacillus plantarum JDM1 8188183 YP_003064444.1 CDS agrA NC_012984.1 3089660 3090403 R response regulator; accesory gene regulator protein A complement(3089660..3090403) Lactobacillus plantarum JDM1 8188184 YP_003064445.1 CDS agrC NC_012984.1 3090396 3091655 R histidine protein kinase; sensor protein complement(3090396..3091655) Lactobacillus plantarum JDM1 8188185 YP_003064446.1 CDS agrD NC_012984.1 3091670 3091792 R accesory gene regulator protein D, peptide pheromone precursor complement(3091670..3091792) Lactobacillus plantarum JDM1 8188186 YP_003064447.1 CDS agrB NC_012984.1 3091773 3092375 R accesory gene regulator protein B complement(3091773..3092375) Lactobacillus plantarum JDM1 8188187 YP_003064448.1 CDS clpL NC_012984.1 3092743 3094857 R ATP-dependent Clp protease, ATP-binding subunit ClpL complement(3092743..3094857) Lactobacillus plantarum JDM1 8188188 YP_003064449.1 CDS JDM1_2866 NC_012984.1 3095248 3095481 R hypothetical protein complement(3095248..3095481) Lactobacillus plantarum JDM1 8188189 YP_003064450.1 CDS lox NC_012984.1 3096118 3097218 R lactate oxidase complement(3096118..3097218) Lactobacillus plantarum JDM1 8188190 YP_003064451.1 CDS pox4 NC_012984.1 3097245 3098999 R pyruvate oxidase complement(3097245..3098999) Lactobacillus plantarum JDM1 8188191 YP_003064452.1 CDS JDM1_2869 NC_012984.1 3099081 3099506 R transcription regulator () complement(3099081..3099506) Lactobacillus plantarum JDM1 8188192 YP_003064453.1 CDS pox5 NC_012984.1 3099679 3101490 R pyruvate oxidase complement(3099679..3101490) Lactobacillus plantarum JDM1 8188193 YP_003064454.1 CDS JDM1_2871 NC_012984.1 3101808 3102218 R hypothetical protein complement(3101808..3102218) Lactobacillus plantarum JDM1 8188194 YP_003064455.1 CDS JDM1_2872 NC_012984.1 3102306 3102995 R sugar specific permease () complement(3102306..3102995) Lactobacillus plantarum JDM1 8188195 YP_003064456.1 CDS rhaD NC_012984.1 3103020 3103865 R rhamnulose-1-phosphate aldolase complement(3103020..3103865) Lactobacillus plantarum JDM1 8188196 YP_003064457.1 CDS rhaA NC_012984.1 3103914 3105197 R catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase complement(3103914..3105197) Lactobacillus plantarum JDM1 8188197 YP_003064458.1 CDS JDM1_2875 NC_012984.1 3105234 3105548 R hypothetical protein complement(3105234..3105548) Lactobacillus plantarum JDM1 8188198 YP_003064459.1 CDS rhaB NC_012984.1 3105549 3107015 R rhamnulokinase complement(3105549..3107015) Lactobacillus plantarum JDM1 8188199 YP_003064460.1 CDS JDM1_2877 NC_012984.1 3107015 3108334 R sugar transport protein complement(3107015..3108334) Lactobacillus plantarum JDM1 8188200 YP_003064461.1 CDS JDM1_2878 NC_012984.1 3108460 3109434 D transcription regulator 3108460..3109434 Lactobacillus plantarum JDM1 8188201 YP_003064462.1 CDS JDM1_2879 NC_012984.1 3109518 3110297 R transcription regulator complement(3109518..3110297) Lactobacillus plantarum JDM1 8188202 YP_003064463.1 CDS pts36A NC_012984.1 3110596 3111057 D galactitol PTS, EIIA 3110596..3111057 Lactobacillus plantarum JDM1 8188203 YP_003064464.1 CDS pts36B NC_012984.1 3111078 3111389 D galactitol PTS, EIIB 3111078..3111389 Lactobacillus plantarum JDM1 8188204 YP_003064465.1 CDS pts36C NC_012984.1 3111426 3112967 D galactitol PTS, EIIC 3111426..3112967 Lactobacillus plantarum JDM1 8188205 YP_003064466.1 CDS JDM1_2883 NC_012984.1 3112973 3113251 D hypothetical protein 3112973..3113251 Lactobacillus plantarum JDM1 8188206 YP_003064467.1 CDS JDM1_2884 NC_012984.1 3113248 3113970 D hypothetical protein 3113248..3113970 Lactobacillus plantarum JDM1 8188207 YP_003064468.1 CDS JDM1_2885 NC_012984.1 3114294 3114782 R Phosphotransferase system IIA component complement(3114294..3114782) Lactobacillus plantarum JDM1 8188208 YP_003064469.1 CDS JDM1_2886 NC_012984.1 3115168 3115749 R hypothetical protein complement(3115168..3115749) Lactobacillus plantarum JDM1 8188209 YP_003064470.1 CDS JDM1_2887 NC_012984.1 3115796 3116299 R hypothetical protein complement(3115796..3116299) Lactobacillus plantarum JDM1 8188210 YP_003064471.1 CDS JDM1_2888 NC_012984.1 3116312 3117088 R transcription regulator complement(3116312..3117088) Lactobacillus plantarum JDM1 8188211 YP_003064472.1 CDS pts18CBA NC_012984.1 3117159 3119066 R N-acetylglucosamine and glucose PTS, EIICBA complement(3117159..3119066) Lactobacillus plantarum JDM1 8188212 YP_003064473.1 CDS JDM1_2890 NC_012984.1 3119171 3120502 R mannose-6-phosphate isomerase complement(3119171..3120502) Lactobacillus plantarum JDM1 8188213 YP_003064474.1 CDS pgmB2 NC_012984.1 3120701 3121381 R beta-phosphoglucomutase complement(3120701..3121381) Lactobacillus plantarum JDM1 8188214 YP_003064475.1 CDS JDM1_2892 NC_012984.1 3121702 3122199 R hypothetical protein complement(3121702..3122199) Lactobacillus plantarum JDM1 8188215 YP_003064476.1 CDS pts18CBA NC_012984.1 3122244 3124112 R N-acetylglucosamine and glucose PTS, EIICBA complement(3122244..3124112) Lactobacillus plantarum JDM1 8188216 YP_003064477.1 CDS JDM1_2894 NC_012984.1 3124197 3125540 R mannose-6-phosphate isomerase complement(3124197..3125540) Lactobacillus plantarum JDM1 8188217 YP_003064478.1 CDS JDM1_2895 NC_012984.1 3126079 3127086 R transcription regulator complement(3126079..3127086) Lactobacillus plantarum JDM1 8188218 YP_003064479.1 CDS JDM1_2896 NC_012984.1 3127171 3128556 R sugar transport protein complement(3127171..3128556) Lactobacillus plantarum JDM1 8188219 YP_003064480.1 CDS agl6 NC_012984.1 3128575 3130251 R alpha-glucosidase complement(3128575..3130251) Lactobacillus plantarum JDM1 8188220 YP_003064481.1 CDS JDM1_2898 NC_012984.1 3130840 3132285 D hypothetical protein 3130840..3132285 Lactobacillus plantarum JDM1 8188221 YP_003064482.1 CDS bgl NC_012984.1 3132418 3133809 R beta-glucosidase complement(3132418..3133809) Lactobacillus plantarum JDM1 8188222 YP_003064483.1 CDS JDM1_2900 NC_012984.1 3133815 3134693 R sugar kinase and transcription regulator complement(3133815..3134693) Lactobacillus plantarum JDM1 8188223 YP_003064484.1 CDS JDM1_2901 NC_012984.1 3134693 3137392 R alpha-mannosidase complement(3134693..3137392) Lactobacillus plantarum JDM1 8188224 YP_003064485.1 CDS JDM1_2902 NC_012984.1 3137399 3138688 R hypothetical protein complement(3137399..3138688) Lactobacillus plantarum JDM1 8188225 YP_003064486.1 CDS JDM1_2903 NC_012984.1 3138836 3139900 D transcription regulator 3138836..3139900 Lactobacillus plantarum JDM1 8188226 YP_003064487.1 CDS JDM1_2904 NC_012984.1 3139906 3142053 D alpha-1,2-mannosidase 3139906..3142053 Lactobacillus plantarum JDM1 8188227 YP_003064488.1 CDS msmK2 NC_012984.1 3142300 3143436 R multiple sugar ABC transporter, ATP-binding protein complement(3142300..3143436) Lactobacillus plantarum JDM1 8188228 YP_003064489.1 CDS sacK2 NC_012984.1 3143682 3144545 R fructokinase complement(3143682..3144545) Lactobacillus plantarum JDM1 8188229 YP_003064490.1 CDS rrp12 NC_012984.1 3144641 3146101 R response regulator complement(3144641..3146101) Lactobacillus plantarum JDM1 8189903 YP_003064491.1 CDS hpk12 NC_012984.1 3146101 3147813 R histidine protein kinase; sensor protein complement(3146101..3147813) Lactobacillus plantarum JDM1 8187605 YP_003064492.1 CDS JDM1_2909 NC_012984.1 3147814 3148473 R hypothetical protein complement(3147814..3148473) Lactobacillus plantarum JDM1 8187606 YP_003064493.1 CDS dexB NC_012984.1 3148498 3150123 R glucan 1,6-alpha-glucosidase complement(3148498..3150123) Lactobacillus plantarum JDM1 8187607 YP_003064494.1 CDS JDM1_2911 NC_012984.1 3150226 3151698 R sugar ABC transporter substrate-binding protein complement(3150226..3151698) Lactobacillus plantarum JDM1 8187608 YP_003064495.1 CDS JDM1_2912 NC_012984.1 3151788 3152705 R sugar ABC transporter permease complement(3151788..3152705) Lactobacillus plantarum JDM1 8187609 YP_003064496.1 CDS JDM1_2913 NC_012984.1 3152718 3153680 R sugar ABC transporter permease complement(3152718..3153680) Lactobacillus plantarum JDM1 8187610 YP_003064497.1 CDS JDM1_2914 NC_012984.1 3154017 3155867 R hypothetical protein complement(3154017..3155867) Lactobacillus plantarum JDM1 8187611 YP_003064498.1 CDS JDM1_2915 NC_012984.1 3156039 3156866 R transcription regulator complement(3156039..3156866) Lactobacillus plantarum JDM1 8187612 YP_003064499.1 CDS JDM1_2916 NC_012984.1 3156995 3158743 D ABC transporter, ATP-binding and permease protein 3156995..3158743 Lactobacillus plantarum JDM1 8187613 YP_003064500.1 CDS JDM1_2917 NC_012984.1 3158724 3160535 D ABC transporter, ATP-binding and permease protein 3158724..3160535 Lactobacillus plantarum JDM1 8187614 YP_003064501.1 CDS JDM1_2918 NC_012984.1 3160765 3161814 D transcription regulator 3160765..3161814 Lactobacillus plantarum JDM1 8187615 YP_003064502.1 CDS JDM1_2919 NC_012984.1 3161846 3162712 D regulator 3161846..3162712 Lactobacillus plantarum JDM1 8187616 YP_003064503.1 CDS pts38A NC_012984.1 3162962 3163339 R sorbitol PTS, EIIA complement(3162962..3163339) Lactobacillus plantarum JDM1 8187617 YP_003064504.1 CDS pts38BC NC_012984.1 3163367 3164386 R sorbitol PTS, EIIBC complement(3163367..3164386) Lactobacillus plantarum JDM1 8187618 YP_003064505.1 CDS pts38C NC_012984.1 3164410 3164961 R sorbitol PTS, EIIC complement(3164410..3164961) Lactobacillus plantarum JDM1 8187619 YP_003064506.1 CDS srlM2 NC_012984.1 3164966 3165472 R sorbitol operon activator complement(3164966..3165472) Lactobacillus plantarum JDM1 8187620 YP_003064507.1 CDS srlR2 NC_012984.1 3165472 3167337 R sorbitol operon transcription regulator complement(3165472..3167337) Lactobacillus plantarum JDM1 8187621 YP_003064508.1 CDS srlD2 NC_012984.1 3167371 3168174 R Converts D-sorbitol-dphosphate to D-fructose-6-phosphate; sorbitol-6-phosphate 2-dehydrogenase complement(3167371..3168174) Lactobacillus plantarum JDM1 8187622 YP_003064509.1 CDS rbsU NC_012984.1 3168479 3169363 R ribose transport protein complement(3168479..3169363) Lactobacillus plantarum JDM1 8187623 YP_003064510.1 CDS rbsD NC_012984.1 3169393 3169788 R cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase complement(3169393..3169788) Lactobacillus plantarum JDM1 8187624 YP_003064511.1 CDS rbsK3 NC_012984.1 3169791 3170711 R ribokinase complement(3169791..3170711) Lactobacillus plantarum JDM1 8187625 YP_003064512.1 CDS JDM1_2929 NC_012984.1 3170815 3171813 R ribose operon repressor complement(3170815..3171813) Lactobacillus plantarum JDM1 8187626 YP_003064513.1 CDS adhE NC_012984.1 3172073 3174676 R bifunctional acetaldehyde-CoA/alcohol dehydrogenase complement(3172073..3174676) Lactobacillus plantarum JDM1 8187627 YP_003064514.1 CDS JDM1_2931 NC_012984.1 3174965 3175426 R hypothetical protein complement(3174965..3175426) Lactobacillus plantarum JDM1 8187628 YP_003064515.1 CDS padR NC_012984.1 3175617 3176162 R regulator of phenolic acid metabolism PadR complement(3175617..3176162) Lactobacillus plantarum JDM1 8187629 YP_003064516.1 CDS pdc NC_012984.1 3176278 3176814 D p-coumaric acid decarboxylase 3176278..3176814 Lactobacillus plantarum JDM1 8187630 YP_003064517.1 CDS JDM1_2934 NC_012984.1 3176976 3177776 R 2-oxo-hept-3-ene-1,7-dioate hydratase; 2-oxo-hept-4-ene-1,7-dioate hydratase complement(3176976..3177776) Lactobacillus plantarum JDM1 8187631 YP_003064518.1 CDS JDM1_2935 NC_012984.1 3178571 3179053 R acetyltransferase () complement(3178571..3179053) Lactobacillus plantarum JDM1 8187632 YP_003064519.1 CDS JDM1_2936 NC_012984.1 3179211 3180077 D DegV family protein 3179211..3180077 Lactobacillus plantarum JDM1 8187633 YP_003064520.1 CDS JDM1_2937 NC_012984.1 3180177 3180599 R transcription regulator complement(3180177..3180599) Lactobacillus plantarum JDM1 8187634 YP_003064521.1 CDS pepC2 NC_012984.1 3180612 3181928 R cysteine aminopeptidase complement(3180612..3181928) Lactobacillus plantarum JDM1 8187635 YP_003064522.1 CDS sip3 NC_012984.1 3182156 3182743 R signal peptidase I complement(3182156..3182743) Lactobacillus plantarum JDM1 8187636 YP_003064523.1 CDS JDM1_2940 NC_012984.1 3182952 3184490 R hypothetical protein complement(3182952..3184490) Lactobacillus plantarum JDM1 8187637 YP_003064524.1 CDS JDM1_2941 NC_012984.1 3184510 3184851 R cell surface protein precursor complement(3184510..3184851) Lactobacillus plantarum JDM1 8187638 YP_003064525.1 CDS JDM1_2942 NC_012984.1 3184871 3185932 R cell surface protein precursor complement(3184871..3185932) Lactobacillus plantarum JDM1 8187639 YP_003064526.1 CDS JDM1_2943 NC_012984.1 3186079 3186816 R hypothetical protein complement(3186079..3186816) Lactobacillus plantarum JDM1 8187640 YP_003064527.1 CDS gidA NC_012984.1 3187072 3188982 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA complement(3187072..3188982) Lactobacillus plantarum JDM1 8187641 YP_003064528.1 CDS trmE NC_012984.1 3189001 3190392 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(3189001..3190392) Lactobacillus plantarum JDM1 8187642 YP_003064529.1 CDS JDM1_2946 NC_012984.1 3190624 3191592 R hypothetical protein complement(3190624..3191592) Lactobacillus plantarum JDM1 8187643 YP_003064530.1 CDS JDM1_2947 NC_012984.1 3192078 3193331 R hypothetical protein complement(3192078..3193331) Lactobacillus plantarum JDM1 8187644 YP_003064531.1 CDS JDM1_2948 NC_012984.1 3193464 3195101 R lipoprotein precursor, peptide binding protein OppA-like protein complement(3193464..3195101) Lactobacillus plantarum JDM1 8187645 YP_003064532.1 CDS JDM1_2949 NC_012984.1 3195816 3196649 R cell division protein complement(3195816..3196649) Lactobacillus plantarum JDM1 8187646 YP_003064533.1 CDS rnpA NC_012984.1 3196665 3197009 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(3196665..3197009) Lactobacillus plantarum JDM1 8187647 YP_003064534.1 CDS rpmH NC_012984.1 3197122 3197259 D ribosomal protein L34 3197122..3197259 Lactobacillus plantarum JDM1 8187648 JDM1_tRNA01 tRNA JDM1_tRNA01 NC_012984.1 53042 53113 R tRNA-Asn complement(53042..53113) Lactobacillus plantarum JDM1 8189784 JDM1_tRNA02 tRNA JDM1_tRNA02 NC_012984.1 54804 54879 R tRNA-Lys complement(54804..54879) Lactobacillus plantarum JDM1 8189789 JDM1_tRNA03 tRNA JDM1_tRNA03 NC_012984.1 489727 489799 D tRNA-Asn 489727..489799 Lactobacillus plantarum JDM1 8189327 JDM1_tRNA04 tRNA JDM1_tRNA04 NC_012984.1 489845 489917 D tRNA-Thr 489845..489917 Lactobacillus plantarum JDM1 8189328 JDM1_tRNA05 tRNA JDM1_tRNA05 NC_012984.1 493005 493087 D tRNA-Tyr 493005..493087 Lactobacillus plantarum JDM1 8189331 JDM1_tRNA06 tRNA JDM1_tRNA06 NC_012984.1 493097 493168 D tRNA-Gln 493097..493168 Lactobacillus plantarum JDM1 8189332 JDM1_tRNA07 tRNA JDM1_tRNA07 NC_012984.1 513438 513522 D tRNA-Leu 513438..513522 Lactobacillus plantarum JDM1 8189351 JDM1_tRNA08 tRNA JDM1_tRNA08 NC_012984.1 687872 687946 R tRNA-Arg complement(687872..687946) Lactobacillus plantarum JDM1 8188651 JDM1_tRNA09 tRNA JDM1_tRNA09 NC_012984.1 745604 745675 D tRNA-Asn 745604..745675 Lactobacillus plantarum JDM1 8188697 JDM1_tRNA10 tRNA JDM1_tRNA10 NC_012984.1 898831 898912 D tRNA-Leu 898831..898912 Lactobacillus plantarum JDM1 8188745 JDM1_tRNA11 tRNA JDM1_tRNA11 NC_012984.1 898916 898988 D tRNA-Thr 898916..898988 Lactobacillus plantarum JDM1 8188746 JDM1_tRNA12 tRNA JDM1_tRNA12 NC_012984.1 899013 899084 D tRNA-Gly 899013..899084 Lactobacillus plantarum JDM1 8188747 JDM1_tRNA13 tRNA JDM1_tRNA13 NC_012984.1 899093 899178 D tRNA-Leu 899093..899178 Lactobacillus plantarum JDM1 8188748 JDM1_tRNA14 tRNA JDM1_tRNA14 NC_012984.1 899189 899262 D tRNA-Arg 899189..899262 Lactobacillus plantarum JDM1 8188749 JDM1_tRNA15 tRNA JDM1_tRNA15 NC_012984.1 899270 899343 D tRNA-Pro 899270..899343 Lactobacillus plantarum JDM1 8188750 JDM1_tRNA16 tRNA JDM1_tRNA16 NC_012984.1 899394 899467 D tRNA-Pro 899394..899467 Lactobacillus plantarum JDM1 8188751 JDM1_tRNA17 tRNA JDM1_tRNA17 NC_012984.1 1024234 1024306 D tRNA-Arg 1024234..1024306 Lactobacillus plantarum JDM1 8187719 JDM1_tRNA18 tRNA JDM1_tRNA18 NC_012984.1 1026143 1026235 R tRNA-Trp complement(1026143..1026235) Lactobacillus plantarum JDM1 8187722 JDM1_tRNA19 tRNA JDM1_tRNA19 NC_012984.1 1159977 1160049 D tRNA-Asn 1159977..1160049 Lactobacillus plantarum JDM1 8187784 JDM1_tRNA20 tRNA JDM1_tRNA20 NC_012984.1 1160068 1160157 D tRNA-Ser 1160068..1160157 Lactobacillus plantarum JDM1 8187785 JDM1_tRNA21 tRNA JDM1_tRNA21 NC_012984.1 1160179 1160251 D tRNA-Glu 1160179..1160251 Lactobacillus plantarum JDM1 8187786 JDM1_tRNA22 tRNA JDM1_tRNA22 NC_012984.1 1160256 1160328 D tRNA-Val 1160256..1160328 Lactobacillus plantarum JDM1 8187787 JDM1_tRNA23 tRNA JDM1_tRNA23 NC_012984.1 1160384 1160456 D tRNA-Phe 1160384..1160456 Lactobacillus plantarum JDM1 8187788 JDM1_tRNA24 tRNA JDM1_tRNA24 NC_012984.1 1160462 1160544 D tRNA-Tyr 1160462..1160544 Lactobacillus plantarum JDM1 8187789 JDM1_tRNA25 tRNA JDM1_tRNA25 NC_012984.1 1160553 1160626 D tRNA-Trp 1160553..1160626 Lactobacillus plantarum JDM1 8187790 JDM1_tRNA26 tRNA JDM1_tRNA26 NC_012984.1 1160632 1160704 D tRNA-His 1160632..1160704 Lactobacillus plantarum JDM1 8187791 JDM1_tRNA27 tRNA JDM1_tRNA27 NC_012984.1 1160712 1160783 D tRNA-Gln 1160712..1160783 Lactobacillus plantarum JDM1 8187792 JDM1_tRNA28 tRNA JDM1_tRNA28 NC_012984.1 1160806 1160876 D tRNA-Cys 1160806..1160876 Lactobacillus plantarum JDM1 8187793 JDM1_tRNA29 tRNA JDM1_tRNA29 NC_012984.1 1160932 1161019 D tRNA-Leu 1160932..1161019 Lactobacillus plantarum JDM1 8187794 JDM1_tRNA30 tRNA JDM1_tRNA30 NC_012984.1 1232628 1232700 R tRNA-His complement(1232628..1232700) Lactobacillus plantarum JDM1 8189605 JDM1_tRNA31 tRNA JDM1_tRNA31 NC_012984.1 1233089 1233172 R tRNA-Leu complement(1233089..1233172) Lactobacillus plantarum JDM1 8189606 JDM1_tRNA32 tRNA JDM1_tRNA32 NC_012984.1 1251883 1251953 D tRNA-Gly 1251883..1251953 Lactobacillus plantarum JDM1 8189621 JDM1_tRNA33 tRNA JDM1_tRNA33 NC_012984.1 1252010 1252087 D tRNA-Asp 1252010..1252087 Lactobacillus plantarum JDM1 8189622 JDM1_tRNA34 tRNA JDM1_tRNA34 NC_012984.1 1426943 1427016 R tRNA-Arg complement(1426943..1427016) Lactobacillus plantarum JDM1 8187581 JDM1_tRNA35 tRNA JDM1_tRNA35 NC_012984.1 1844554 1844641 R tRNA-Ser complement(1844554..1844641) Lactobacillus plantarum JDM1 8190136 JDM1_tRNA36 tRNA JDM1_tRNA36 NC_012984.1 1980163 1980237 R tRNA-Asp complement(1980163..1980237) Lactobacillus plantarum JDM1 8189000 JDM1_tRNA37 tRNA JDM1_tRNA37 NC_012984.1 1980240 1980313 R tRNA-Met complement(1980240..1980313) Lactobacillus plantarum JDM1 8189001 JDM1_tRNA38 tRNA JDM1_tRNA38 NC_012984.1 1980323 1980395 R tRNA-Glu complement(1980323..1980395) Lactobacillus plantarum JDM1 8189002 JDM1_tRNA39 tRNA JDM1_tRNA39 NC_012984.1 1980415 1980502 R tRNA-Ser complement(1980415..1980502) Lactobacillus plantarum JDM1 8189003 JDM1_tRNA40 tRNA JDM1_tRNA40 NC_012984.1 1980507 1980581 R tRNA-Ile complement(1980507..1980581) Lactobacillus plantarum JDM1 8189004 JDM1_tRNA41 tRNA JDM1_tRNA41 NC_012984.1 1980588 1980658 R tRNA-Gly complement(1980588..1980658) Lactobacillus plantarum JDM1 8189005 JDM1_tRNA42 tRNA JDM1_tRNA42 NC_012984.1 1980671 1980743 R tRNA-Phe complement(1980671..1980743) Lactobacillus plantarum JDM1 8189006 JDM1_tRNA43 tRNA JDM1_tRNA43 NC_012984.1 1980772 1980847 R tRNA-Asp complement(1980772..1980847) Lactobacillus plantarum JDM1 8189007 JDM1_tRNA44 tRNA JDM1_tRNA44 NC_012984.1 1980851 1980924 R tRNA-Met complement(1980851..1980924) Lactobacillus plantarum JDM1 8189008 JDM1_tRNA45 tRNA JDM1_tRNA45 NC_012984.1 1980931 1981020 R tRNA-Ser complement(1980931..1981020) Lactobacillus plantarum JDM1 8189009 JDM1_tRNA46 tRNA JDM1_tRNA46 NC_012984.1 1981060 1981133 R tRNA-Met complement(1981060..1981133) Lactobacillus plantarum JDM1 8189010 JDM1_tRNA47 tRNA JDM1_tRNA47 NC_012984.1 1981149 1981222 R tRNA-Met complement(1981149..1981222) Lactobacillus plantarum JDM1 8189011 JDM1_tRNA48 tRNA JDM1_tRNA48 NC_012984.1 1981254 1981327 R tRNA-Pro complement(1981254..1981327) Lactobacillus plantarum JDM1 8189012 JDM1_tRNA49 tRNA JDM1_tRNA49 NC_012984.1 1981333 1981406 R tRNA-Arg complement(1981333..1981406) Lactobacillus plantarum JDM1 8189013 JDM1_tRNA50 tRNA JDM1_tRNA50 NC_012984.1 1981417 1981502 R tRNA-Leu complement(1981417..1981502) Lactobacillus plantarum JDM1 8189014 JDM1_tRNA51 tRNA JDM1_tRNA51 NC_012984.1 1981518 1981589 R tRNA-Gly complement(1981518..1981589) Lactobacillus plantarum JDM1 8189015 JDM1_tRNA52 tRNA JDM1_tRNA52 NC_012984.1 1981606 1981678 R tRNA-Thr complement(1981606..1981678) Lactobacillus plantarum JDM1 8189016 JDM1_tRNA53 tRNA JDM1_tRNA53 NC_012984.1 1981773 1981845 R tRNA-Lys complement(1981773..1981845) Lactobacillus plantarum JDM1 8189017 JDM1_tRNA54 tRNA JDM1_tRNA54 NC_012984.1 1981847 1981922 R tRNA-Val complement(1981847..1981922) Lactobacillus plantarum JDM1 8189018 JDM1_tRNA55 tRNA JDM1_tRNA55 NC_012984.1 1981850 1981922 R tRNA-Val complement(1981850..1981922) Lactobacillus plantarum JDM1 8189019 JDM1_tRNA56 tRNA JDM1_tRNA56 NC_012984.1 1982100 1982172 R tRNA-Lys complement(1982100..1982172) Lactobacillus plantarum JDM1 8189021 JDM1_tRNA57 tRNA JDM1_tRNA57 NC_012984.1 1982174 1982249 R tRNA-Val complement(1982174..1982249) Lactobacillus plantarum JDM1 8189022 JDM1_tRNA58 tRNA JDM1_tRNA58 NC_012984.1 1982177 1982249 R tRNA-Val complement(1982177..1982249) Lactobacillus plantarum JDM1 8189023 JDM1_tRNA59 tRNA JDM1_tRNA59 NC_012984.1 2129264 2129336 R tRNA-Glu complement(2129264..2129336) Lactobacillus plantarum JDM1 8189950 JDM1_tRNA60 tRNA JDM1_tRNA60 NC_012984.1 2129727 2129799 D tRNA-Gln 2129727..2129799 Lactobacillus plantarum JDM1 8189952 JDM1_tRNA61 tRNA JDM1_tRNA61 NC_012984.1 2406623 2406695 R tRNA-Thr complement(2406623..2406695) Lactobacillus plantarum JDM1 8189518 JDM1_tRNA62 tRNA JDM1_tRNA62 NC_012984.1 2933358 2933430 D tRNA-Ala 2933358..2933430 Lactobacillus plantarum JDM1 8188542 JDM1_rRNA01 rRNA JDM1_rRNA01 NC_012984.1 484838 486408 D 16S ribosomal RNA 484838..486408 Lactobacillus plantarum JDM1 8189324 JDM1_rRNA02 rRNA JDM1_rRNA02 NC_012984.1 486614 489533 D 23S ribosomal RNA 486614..489533 Lactobacillus plantarum JDM1 8189325 JDM1_rRNA03 rRNA JDM1_rRNA03 NC_012984.1 489604 489722 D 5S ribosomal RNA 489604..489722 Lactobacillus plantarum JDM1 8189326 JDM1_rRNA04 rRNA JDM1_rRNA04 NC_012984.1 1155088 1156658 D 16S ribosomal RNA 1155088..1156658 Lactobacillus plantarum JDM1 8187781 JDM1_rRNA05 rRNA JDM1_rRNA05 NC_012984.1 1156864 1159783 D 23S ribosomal RNA 1156864..1159783 Lactobacillus plantarum JDM1 8187782 JDM1_rRNA06 rRNA JDM1_rRNA06 NC_012984.1 1159854 1159972 D 5S ribosomal RNA 1159854..1159972 Lactobacillus plantarum JDM1 8187783 JDM1_rRNA07 rRNA JDM1_rRNA07 NC_012984.1 1981927 1982045 R 5S ribosomal RNA complement(1981927..1982045) Lactobacillus plantarum JDM1 8189020 JDM1_rRNA08 rRNA JDM1_rRNA08 NC_012984.1 1982254 1982372 R 5S ribosomal RNA complement(1982254..1982372) Lactobacillus plantarum JDM1 8189024 JDM1_rRNA09 rRNA JDM1_rRNA09 NC_012984.1 1982443 1985362 R 23S ribosomal RNA complement(1982443..1985362) Lactobacillus plantarum JDM1 8189025 JDM1_rRNA10 rRNA JDM1_rRNA10 NC_012984.1 1985568 1987138 R 16S ribosomal RNA complement(1985568..1987138) Lactobacillus plantarum JDM1 8189026 JDM1_rRNA11 rRNA JDM1_rRNA11 NC_012984.1 2406801 2406917 R 5S ribosomal RNA complement(2406801..2406917) Lactobacillus plantarum JDM1 8189519 JDM1_rRNA12 rRNA JDM1_rRNA12 NC_012984.1 2406988 2409907 R 23S ribosomal RNA complement(2406988..2409907) Lactobacillus plantarum JDM1 8189520 JDM1_rRNA13 rRNA JDM1_rRNA13 NC_012984.1 2410113 2411683 R 16S ribosomal RNA complement(2410113..2411683) Lactobacillus plantarum JDM1 8189521 JDM1_rRNA14 rRNA JDM1_rRNA14 NC_012984.1 2857372 2857488 R 5S ribosomal RNA complement(2857372..2857488) Lactobacillus plantarum JDM1 8189187 JDM1_rRNA15 rRNA JDM1_rRNA15 NC_012984.1 2857559 2860478 R 23S ribosomal RNA complement(2857559..2860478) Lactobacillus plantarum JDM1 8189188 JDM1_rRNA16 rRNA JDM1_rRNA16 NC_012984.1 2860684 2862254 R 16S ribosomal RNA complement(2860684..2862254) Lactobacillus plantarum JDM1 8189189