-- dump date 20140619_124327 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_001270614.1 148543244 5188277 381..1703 1 NC_009513.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1703 dnaA 5188277 dnaA Lactobacillus reuteri DSM 20016 chromosomal replication initiation protein YP_001270614.1 381 D 557436 CDS YP_001270615.1 148543245 5189553 1879..3021 1 NC_009513.1 TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain; DNA polymerase III subunit beta 3021 5189553 Lreu_0002 Lactobacillus reuteri DSM 20016 DNA polymerase III subunit beta YP_001270615.1 1879 D 557436 CDS YP_001270616.1 148543246 5190076 3268..3489 1 NC_009513.1 TIGRFAM: S4 region, YaaA; S4 region, YaaA 3489 5190076 Lreu_0003 Lactobacillus reuteri DSM 20016 S4 region, YaaA YP_001270616.1 3268 D 557436 CDS YP_001270617.1 148543247 5188848 3498..4622 1 NC_009513.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 4622 recF 5188848 recF Lactobacillus reuteri DSM 20016 recombination protein F YP_001270617.1 3498 D 557436 CDS YP_001270618.1 148543248 5188813 4619..6568 1 NC_009513.1 TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein domain protein; TOPRIM domain protein; DNA topoisomerase, type IIA, subunit B, region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B 6568 5188813 Lreu_0005 Lactobacillus reuteri DSM 20016 DNA gyrase subunit B YP_001270618.1 4619 D 557436 CDS YP_001270619.1 148543249 5189221 6611..9115 1 NC_009513.1 TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; DNA gyrase subunit A 9115 5189221 Lreu_0006 Lactobacillus reuteri DSM 20016 DNA gyrase subunit A YP_001270619.1 6611 D 557436 CDS YP_001270620.1 148543250 5188160 9318..9614 1 NC_009513.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 9614 rpsF 5188160 rpsF Lactobacillus reuteri DSM 20016 30S ribosomal protein S6 YP_001270620.1 9318 D 557436 CDS YP_001270621.1 148543251 5188894 9652..10215 1 NC_009513.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding, OB-fold, tRNA/helicase-type; single-strand binding protein 10215 5188894 Lreu_0008 Lactobacillus reuteri DSM 20016 single-strand binding protein YP_001270621.1 9652 D 557436 CDS YP_001270622.1 148543252 5188535 10249..10485 1 NC_009513.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 10485 rpsR 5188535 rpsR Lactobacillus reuteri DSM 20016 30S ribosomal protein S18 YP_001270622.1 10249 D 557436 CDS YP_001270623.1 148543253 5189074 10702..12720 1 NC_009513.1 PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; phosphoesterase domain-containing protein 12720 5189074 Lreu_0010 Lactobacillus reuteri DSM 20016 phosphoesterase domain-containing protein YP_001270623.1 10702 D 557436 CDS YP_001270624.1 148543254 5189247 12726..13178 1 NC_009513.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 13178 rplI 5189247 rplI Lactobacillus reuteri DSM 20016 50S ribosomal protein L9 YP_001270624.1 12726 D 557436 CDS YP_001270625.1 148543255 5188304 13212..14603 1 NC_009513.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; primary replicative DNA helicase 14603 5188304 Lreu_0012 Lactobacillus reuteri DSM 20016 primary replicative DNA helicase YP_001270625.1 13212 D 557436 CDS YP_001270626.1 148543256 5189914 14725..15927 1 NC_009513.1 PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter 15927 5189914 Lreu_0013 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001270626.1 14725 D 557436 CDS YP_001270627.1 148543257 5190171 15940..16266 1 NC_009513.1 hypothetical protein 16266 5190171 Lreu_0014 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270627.1 15940 D 557436 CDS YP_001270628.1 148543258 5188175 16371..17249 1 NC_009513.1 PFAM: protein of unknown function DUF344; polyphosphate:AMP phosphotransferase 17249 5188175 Lreu_0015 Lactobacillus reuteri DSM 20016 polyphosphate:AMP phosphotransferase YP_001270628.1 16371 D 557436 CDS YP_001270629.1 148543259 5188701 complement(17279..17836) 1 NC_009513.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 17836 5188701 Lreu_0016 Lactobacillus reuteri DSM 20016 XRE family transcriptional regulator YP_001270629.1 17279 R 557436 CDS YP_001270630.1 148543260 5189592 18438..18872 1 NC_009513.1 PFAM: regulatory protein, MarR; MarR family transcriptional regulator 18872 5189592 Lreu_0017 Lactobacillus reuteri DSM 20016 MarR family transcriptional regulator YP_001270630.1 18438 D 557436 CDS YP_001270631.1 148543261 5189516 18960..20681 1 NC_009513.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 20681 5189516 Lreu_0018 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001270631.1 18960 D 557436 CDS YP_001270632.1 148543262 5189474 21025..21732 1 NC_009513.1 PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 21732 5189474 Lreu_0019 Lactobacillus reuteri DSM 20016 two component transcriptional regulator YP_001270632.1 21025 D 557436 CDS YP_001270633.1 148543263 5188747 21746..23611 1 NC_009513.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 23611 5188747 Lreu_0020 Lactobacillus reuteri DSM 20016 PAS/PAC sensor signal transduction histidine kinase YP_001270633.1 21746 D 557436 CDS YP_001270634.1 148543264 5189922 23589..24884 1 NC_009513.1 PFAM: YycH family protein; hypothetical protein 24884 5189922 Lreu_0021 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270634.1 23589 D 557436 CDS YP_001270635.1 148543265 5190059 24897..25739 1 NC_009513.1 hypothetical protein 25739 5190059 Lreu_0022 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270635.1 24897 D 557436 CDS YP_001270636.1 148543266 5188768 25757..26563 1 NC_009513.1 PFAM: beta-lactamase domain protein; beta-lactamase domain-containing protein 26563 5188768 Lreu_0023 Lactobacillus reuteri DSM 20016 beta-lactamase domain-containing protein YP_001270636.1 25757 D 557436 CDS YP_001270637.1 148543267 5188795 26665..27939 1 NC_009513.1 PFAM: peptidase S1 and S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; peptidase S1 and S6, chymotrypsin/Hap 27939 5188795 Lreu_0024 Lactobacillus reuteri DSM 20016 peptidase S1 and S6, chymotrypsin/Hap YP_001270637.1 26665 D 557436 CDS YP_001270638.1 148543268 5189766 28168..28665 1 NC_009513.1 PFAM: phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A 28665 5189766 Lreu_0025 Lactobacillus reuteri DSM 20016 phosphatidylglycerophosphatase A YP_001270638.1 28168 D 557436 CDS YP_001270639.1 148543269 5189494 28974..29960 1 NC_009513.1 PFAM: protein of unknown function DUF534; hypothetical protein 29960 5189494 Lreu_0026 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270639.1 28974 D 557436 CDS YP_001270640.1 148543270 5189152 30429..30908 1 NC_009513.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 30908 5189152 Lreu_0027 Lactobacillus reuteri DSM 20016 rRNA large subunit methyltransferase YP_001270640.1 30429 D 557436 CDS YP_001270641.1 148543271 5188898 31051..31269 1 NC_009513.1 hypothetical protein 31269 5188898 Lreu_0028 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270641.1 31051 D 557436 CDS YP_001270642.1 148543272 5188794 31343..31879 1 NC_009513.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 31879 5188794 Lreu_0029 Lactobacillus reuteri DSM 20016 NADPH-dependent FMN reductase YP_001270642.1 31343 D 557436 CDS YP_001270643.1 148543273 5188789 32098..33270 1 NC_009513.1 PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 33270 5188789 Lreu_0030 Lactobacillus reuteri DSM 20016 iron-containing alcohol dehydrogenase YP_001270643.1 32098 D 557436 CDS YP_001270644.1 148543274 5188841 33514..34377 1 NC_009513.1 PFAM: sugar transport family protein; sugar transport family protein 34377 5188841 Lreu_0031 Lactobacillus reuteri DSM 20016 sugar transport family protein YP_001270644.1 33514 D 557436 CDS YP_001270645.1 148543275 5188860 complement(34492..35268) 1 NC_009513.1 hypothetical protein 35268 5188860 Lreu_0032 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270645.1 34492 R 557436 CDS YP_001270646.1 148543276 5189862 complement(35270..36082) 1 NC_009513.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent; pyrroline-5-carboxylate reductase 36082 5189862 Lreu_0033 Lactobacillus reuteri DSM 20016 pyrroline-5-carboxylate reductase YP_001270646.1 35270 R 557436 CDS YP_001270647.1 148543277 5188726 36383..37756 1 NC_009513.1 PFAM: aldehyde dehydrogenase; aldehyde dehydrogenase 37756 5188726 Lreu_0034 Lactobacillus reuteri DSM 20016 aldehyde dehydrogenase YP_001270647.1 36383 D 557436 CDS YP_001270648.1 148543278 5189491 37932..39014 1 NC_009513.1 TIGRFAM: efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 39014 5189491 Lreu_0035 Lactobacillus reuteri DSM 20016 RND family efflux transporter MFP subunit YP_001270648.1 37932 D 557436 CDS YP_001270649.1 148543279 5188824 39016..39714 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 39714 5188824 Lreu_0036 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001270649.1 39016 D 557436 CDS YP_001270650.1 148543280 5188791 39701..40936 1 NC_009513.1 PFAM: protein of unknown function DUF214; hypothetical protein 40936 5188791 Lreu_0037 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270650.1 39701 D 557436 CDS YP_001270651.1 148543281 5189370 41186..41590 1 NC_009513.1 hypothetical protein 41590 5189370 Lreu_0038 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270651.1 41186 D 557436 CDS YP_001270652.1 148543282 5189506 41600..41737 1 NC_009513.1 hypothetical protein 41737 5189506 Lreu_0039 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270652.1 41600 D 557436 CDS YP_001270653.1 148543283 5188728 41926..43320 1 NC_009513.1 hypothetical protein 43320 5188728 Lreu_0040 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270653.1 41926 D 557436 CDS YP_001270654.1 148543284 5188751 43610..44086 1 NC_009513.1 hypothetical protein 44086 5188751 Lreu_0041 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270654.1 43610 D 557436 CDS YP_001270655.1 148543285 5188866 complement(44169..44597) 1 NC_009513.1 PFAM: OsmC family protein; OsmC family protein 44597 5188866 Lreu_0042 Lactobacillus reuteri DSM 20016 OsmC family protein YP_001270655.1 44169 R 557436 CDS YP_001270656.1 148543286 5189684 complement(44665..45660) 1 NC_009513.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 45660 5189684 Lreu_0043 Lactobacillus reuteri DSM 20016 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit YP_001270656.1 44665 R 557436 CDS YP_001270657.1 148543287 5189670 complement(45662..46849) 1 NC_009513.1 PFAM: aminotransferase, class I and II; aromatic amino acid aminotransferase 46849 5189670 Lreu_0044 Lactobacillus reuteri DSM 20016 aromatic amino acid aminotransferase YP_001270657.1 45662 R 557436 CDS YP_001270658.1 148543288 5189536 47696..49933 1 NC_009513.1 PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATPase 49933 5189536 Lreu_0045 Lactobacillus reuteri DSM 20016 ATPase YP_001270658.1 47696 D 557436 CDS YP_001270659.1 148543289 5188770 50822..53677 1 NC_009513.1 hypothetical protein 53677 5188770 Lreu_0046 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270659.1 50822 D 557436 CDS YP_001270660.1 148543290 5189867 complement(53759..54343) 1 NC_009513.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 54343 5189867 Lreu_0047 Lactobacillus reuteri DSM 20016 N-acetyltransferase GCN5 YP_001270660.1 53759 R 557436 CDS YP_001270661.1 148543291 5189046 54483..55946 1 NC_009513.1 PFAM: phospholipase D/Transphosphatidylase; cardiolipin synthetase 2 55946 5189046 Lreu_0048 Lactobacillus reuteri DSM 20016 cardiolipin synthetase 2 YP_001270661.1 54483 D 557436 CDS YP_001270662.1 148543292 5189386 56075..59857 1 NC_009513.1 DNA helicase/exodeoxyribonuclease V subunit B 59857 5189386 Lreu_0049 Lactobacillus reuteri DSM 20016 DNA helicase/exodeoxyribonuclease V subunit B YP_001270662.1 56075 D 557436 CDS YP_001270663.1 148543293 5190144 59857..64035 1 NC_009513.1 TIGRFAM: Recombination helicase AddA; PFAM: UvrD/REP helicase; recombination helicase AddA 64035 5190144 Lreu_0050 Lactobacillus reuteri DSM 20016 recombination helicase AddA YP_001270663.1 59857 D 557436 CDS YP_001270664.1 148543294 5189904 64036..64971 1 NC_009513.1 PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 64971 5189904 Lreu_0051 Lactobacillus reuteri DSM 20016 LacI family transcriptional regulator YP_001270664.1 64036 D 557436 CDS YP_001270665.1 148543295 5189875 65035..66213 1 NC_009513.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 66213 5189875 Lreu_0052 Lactobacillus reuteri DSM 20016 acetyl-CoA acetyltransferase YP_001270665.1 65035 D 557436 CDS YP_001270666.1 148543296 5189003 66525..67874 1 NC_009513.1 PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter 67874 5189003 Lreu_0053 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001270666.1 66525 D 557436 CDS YP_001270667.1 148543297 5189672 67963..70215 1 NC_009513.1 PFAM: glycoside hydrolase, family 65 domain protein; glycoside hydrolase family 65, central catalytic; glycoside hydrolase family 65 domain protein; maltose phosphorylase 70215 5189672 Lreu_0054 Lactobacillus reuteri DSM 20016 maltose phosphorylase YP_001270667.1 67963 D 557436 CDS YP_001270668.1 148543298 5189930 70234..70896 1 NC_009513.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; beta-phosphoglucomutase 70896 5189930 Lreu_0055 Lactobacillus reuteri DSM 20016 beta-phosphoglucomutase YP_001270668.1 70234 D 557436 CDS YP_001270669.1 148543299 5189439 70973..71455 1 NC_009513.1 hypothetical protein 71455 5189439 Lreu_0056 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270669.1 70973 D 557436 CDS YP_001270670.1 148543300 5188172 72166..72831 1 NC_009513.1 PFAM: response regulator receiver; two component transcriptional regulator 72831 5188172 Lreu_0058 Lactobacillus reuteri DSM 20016 two component transcriptional regulator YP_001270670.1 72166 D 557436 CDS YP_001270671.1 148543301 5189811 72843..74090 1 NC_009513.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase 74090 5189811 Lreu_0059 Lactobacillus reuteri DSM 20016 integral membrane sensor signal transduction histidine kinase YP_001270671.1 72843 D 557436 CDS YP_001270672.1 148543302 5188771 74093..75274 1 NC_009513.1 hypothetical protein 75274 5188771 Lreu_0060 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270672.1 74093 D 557436 CDS YP_001270673.1 148543303 5189547 75426..76766 1 NC_009513.1 PFAM: glutamate--cysteine ligase; glutamate--cysteine ligase 76766 5189547 Lreu_0061 Lactobacillus reuteri DSM 20016 glutamate--cysteine ligase YP_001270673.1 75426 D 557436 CDS YP_001270674.1 148543304 5189671 77012..77470 1 NC_009513.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 77470 5189671 Lreu_0062 Lactobacillus reuteri DSM 20016 transposase IS200-family protein YP_001270674.1 77012 D 557436 CDS YP_001270675.1 148543305 5190148 complement(77669..78397) 1 NC_009513.1 PFAM: glutamine amidotransferase class-I; peptidase C26; peptidase C26 78397 5190148 Lreu_0063 Lactobacillus reuteri DSM 20016 peptidase C26 YP_001270675.1 77669 R 557436 CDS YP_001270676.1 148543306 5189571 78516..79382 1 NC_009513.1 PFAM: aldo/keto reductase; 2,5-didehydrogluconate reductase 79382 5189571 Lreu_0064 Lactobacillus reuteri DSM 20016 2,5-didehydrogluconate reductase YP_001270676.1 78516 D 557436 CDS YP_001270677.1 148543307 5189771 79521..81308 1 NC_009513.1 PFAM: glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 81308 5189771 Lreu_0065 Lactobacillus reuteri DSM 20016 glycerophosphoryl diester phosphodiesterase YP_001270677.1 79521 D 557436 CDS YP_001270678.1 148543308 5189484 complement(81361..81858) 1 NC_009513.1 hypothetical protein 81858 5189484 Lreu_0066 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270678.1 81361 R 557436 CDS YP_001270679.1 148543309 5189747 82127..83476 1 NC_009513.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 83476 5189747 Lreu_0067 Lactobacillus reuteri DSM 20016 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001270679.1 82127 D 557436 CDS YP_001270680.1 148543310 5190170 complement(83536..84510) 1 NC_009513.1 TIGRFAM: guanosine monophosphate reductase; PFAM: IMP dehydrogenase/GMP reductase; guanosine 5'-monophosphate oxidoreductase 84510 5190170 Lreu_0068 Lactobacillus reuteri DSM 20016 guanosine 5'-monophosphate oxidoreductase YP_001270680.1 83536 R 557436 CDS YP_001270681.1 148543311 5188905 84706..86004 1 NC_009513.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 86004 5188905 Lreu_0069 Lactobacillus reuteri DSM 20016 adenylosuccinate synthetase YP_001270681.1 84706 D 557436 CDS YP_001270682.1 148543312 5189469 86115..86900 1 NC_009513.1 hypothetical protein 86900 5189469 Lreu_0070 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270682.1 86115 D 557436 CDS YP_001270683.1 148543313 5189653 87063..87602 1 NC_009513.1 PFAM: phosphoribosyltransferase; uracil phosphoribosyltransferase 87602 5189653 Lreu_0071 Lactobacillus reuteri DSM 20016 uracil phosphoribosyltransferase YP_001270683.1 87063 D 557436 CDS YP_001270684.1 148543314 5189593 complement(87721..88107) 1 NC_009513.1 hypothetical protein 88107 5189593 Lreu_0072 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270684.1 87721 R 557436 CDS YP_001270685.1 148543315 5188995 complement(88356..89612) 1 NC_009513.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase, IS891/IS1136/IS1341 family; transposase, IS605 OrfB; IS605 family transposase OrfB 89612 5188995 Lreu_0073 Lactobacillus reuteri DSM 20016 IS605 family transposase OrfB YP_001270685.1 88356 R 557436 CDS YP_001270686.1 148543316 5189818 89687..90142 1 NC_009513.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 90142 5189818 Lreu_0074 Lactobacillus reuteri DSM 20016 transposase IS200-family protein YP_001270686.1 89687 D 557436 CDS YP_001270687.1 148543317 5189479 90267..91001 1 NC_009513.1 PFAM: glutamine amidotransferase class-I; peptidase C26; peptidase C26 91001 5189479 Lreu_0075 Lactobacillus reuteri DSM 20016 peptidase C26 YP_001270687.1 90267 D 557436 CDS YP_001270688.1 148543318 5189560 91007..92401 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 92401 5189560 Lreu_0076 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001270688.1 91007 D 557436 CDS YP_001270689.1 148543319 5189820 92873..93070 1 NC_009513.1 hypothetical protein 93070 5189820 Lreu_0077 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270689.1 92873 D 557436 CDS YP_001270690.1 148543320 5189442 93058..93513 1 NC_009513.1 hypothetical protein 93513 5189442 Lreu_0078 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270690.1 93058 D 557436 CDS YP_001270691.1 148543321 5189848 complement(93578..94021) 1 NC_009513.1 hypothetical protein 94021 5189848 Lreu_0079 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270691.1 93578 R 557436 CDS YP_001270692.1 148543322 5188758 94121..95662 1 NC_009513.1 PFAM: glycosyl transferase, group 1; Protein of unknown function DUF1975; hypothetical protein 95662 5188758 Lreu_0080 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270692.1 94121 D 557436 CDS YP_001270693.1 148543323 5189504 95664..97166 1 NC_009513.1 PFAM: glycosyl transferase, group 1; Protein of unknown function DUF1975; hypothetical protein 97166 5189504 Lreu_0081 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270693.1 95664 D 557436 CDS YP_001270694.1 148543324 5188981 97278..99095 1 NC_009513.1 hypothetical protein 99095 5188981 Lreu_0082 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270694.1 97278 D 557436 CDS YP_001270695.1 148543325 5189544 99279..100961 1 NC_009513.1 PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase 100961 5189544 Lreu_0083 Lactobacillus reuteri DSM 20016 alpha amylase YP_001270695.1 99279 D 557436 CDS YP_001270696.1 148543326 5188838 100979..102364 1 NC_009513.1 PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter 102364 5188838 Lreu_0084 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001270696.1 100979 D 557436 CDS YP_001270697.1 148543327 5189817 complement(102442..105612) 1 NC_009513.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 105612 carB 5189817 carB Lactobacillus reuteri DSM 20016 carbamoyl phosphate synthase large subunit YP_001270697.1 102442 R 557436 CDS YP_001270698.1 148543328 5189663 complement(105605..106693) 1 NC_009513.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 106693 5189663 Lreu_0086 Lactobacillus reuteri DSM 20016 carbamoyl phosphate synthase small subunit YP_001270698.1 105605 R 557436 CDS YP_001270699.1 148543329 5188832 complement(107075..108448) 1 NC_009513.1 PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter 108448 5188832 Lreu_0087 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001270699.1 107075 R 557436 CDS YP_001270700.1 148543330 5189732 complement(108608..109618) 1 NC_009513.1 PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 109618 5189732 Lreu_0088 Lactobacillus reuteri DSM 20016 LacI family transcriptional regulator YP_001270700.1 108608 R 557436 CDS YP_001270701.1 148543331 5188807 complement(109757..111163) 1 NC_009513.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; RNA methyltransferase 111163 5188807 Lreu_0089 Lactobacillus reuteri DSM 20016 RNA methyltransferase YP_001270701.1 109757 R 557436 CDS YP_001270702.1 148543332 5189486 111380..111991 1 NC_009513.1 PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 111991 5189486 Lreu_0090 Lactobacillus reuteri DSM 20016 NADPH-dependent FMN reductase YP_001270702.1 111380 D 557436 CDS YP_001270703.1 148543333 5189723 111991..113241 1 NC_009513.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 113241 5189723 Lreu_0091 Lactobacillus reuteri DSM 20016 NADPH-dependent FMN reductase YP_001270703.1 111991 D 557436 CDS YP_001270704.1 148543334 5189788 113244..114170 1 NC_009513.1 PFAM: ApbE family lipoprotein; ApbE family lipoprotein 114170 5189788 Lreu_0092 Lactobacillus reuteri DSM 20016 ApbE family lipoprotein YP_001270704.1 113244 D 557436 CDS YP_001270705.1 148543335 5189795 114668..116050 1 NC_009513.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 116050 5189795 Lreu_0093 Lactobacillus reuteri DSM 20016 RNA-directed DNA polymerase YP_001270705.1 114668 D 557436 CDS YP_001270706.1 148543336 5190163 121729..123036 1 NC_009513.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 123036 5190163 Lreu_0097 Lactobacillus reuteri DSM 20016 seryl-tRNA synthetase YP_001270706.1 121729 D 557436 CDS YP_001270707.1 148543337 5189110 123305..124768 1 NC_009513.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; polar amino acid ABC transporter inner membrane protein 124768 5189110 Lreu_0098 Lactobacillus reuteri DSM 20016 polar amino acid ABC transporter inner membrane protein YP_001270707.1 123305 D 557436 CDS YP_001270708.1 148543338 5188776 124770..125513 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 125513 5188776 Lreu_0099 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001270708.1 124770 D 557436 CDS YP_001270709.1 148543339 5189929 125817..127166 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 127166 5189929 Lreu_0100 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001270709.1 125817 D 557436 CDS YP_001270710.1 148543340 5189733 128117..129328 1 NC_009513.1 PFAM: Na+ dependent nucleoside transporter; Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter 129328 5189733 Lreu_0101 Lactobacillus reuteri DSM 20016 Na+ dependent nucleoside transporter YP_001270710.1 128117 D 557436 CDS YP_001270711.1 148543341 5189743 129409..130317 1 NC_009513.1 catalyzes the hydrolysis of both purine and pyrimidine ribonucleosides; ribonucleoside hydrolase RihC 130317 5189743 Lreu_0102 Lactobacillus reuteri DSM 20016 ribonucleoside hydrolase RihC YP_001270711.1 129409 D 557436 CDS YP_001270712.1 148543342 5189951 130420..131304 1 NC_009513.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 131304 5189951 Lreu_0103 Lactobacillus reuteri DSM 20016 3-hydroxybutyryl-CoA dehydrogenase YP_001270712.1 130420 D 557436 CDS YP_001270713.1 148543343 5189774 131482..132207 1 NC_009513.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 132207 gidB 5189774 gidB Lactobacillus reuteri DSM 20016 16S rRNA methyltransferase GidB YP_001270713.1 131482 D 557436 CDS YP_001270714.1 148543344 5189570 132225..133193 1 NC_009513.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; effector of nucleoid occlusion Noc 133193 5189570 Lreu_0105 Lactobacillus reuteri DSM 20016 effector of nucleoid occlusion Noc YP_001270714.1 132225 D 557436 CDS YP_001270715.1 148543345 5189669 133206..133976 1 NC_009513.1 PFAM: Cobyrinic acid a,c-diamide synthase; chromosome segregation ATPase 133976 5189669 Lreu_0106 Lactobacillus reuteri DSM 20016 chromosome segregation ATPase YP_001270715.1 133206 D 557436 CDS YP_001270716.1 148543346 5189366 133963..134847 1 NC_009513.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; chromosome segregation DNA-binding protein 134847 5189366 Lreu_0107 Lactobacillus reuteri DSM 20016 chromosome segregation DNA-binding protein YP_001270716.1 133963 D 557436 CDS YP_001270717.1 148543347 5189423 134861..135058 1 NC_009513.1 PFAM: protein of unknown function DUF951; hypothetical protein 135058 5189423 Lreu_0108 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270717.1 134861 D 557436 CDS YP_001270718.1 148543348 5189662 135142..136239 1 NC_009513.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 136239 ychF 5189662 ychF Lactobacillus reuteri DSM 20016 GTP-dependent nucleic acid-binding protein EngD YP_001270718.1 135142 D 557436 CDS YP_001270719.1 148543349 5189911 136272..137042 1 NC_009513.1 PFAM: membrane protein of unknown function UCP033111; hypothetical protein 137042 5189911 Lreu_0110 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270719.1 136272 D 557436 CDS YP_001270720.1 148543350 5189680 137255..137929 1 NC_009513.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 137929 5189680 Lreu_0111 Lactobacillus reuteri DSM 20016 deoxyribose-phosphate aldolase YP_001270720.1 137255 D 557436 CDS YP_001270721.1 148543351 5189755 137982..139175 1 NC_009513.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 139175 5189755 Lreu_0112 Lactobacillus reuteri DSM 20016 phosphopentomutase YP_001270721.1 137982 D 557436 CDS YP_001270722.1 148543352 5188745 139204..140502 1 NC_009513.1 TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase, family 3; Pyrimidine nucleoside phosphorylase, C-terminal domain; thymidine phosphorylase 140502 5188745 Lreu_0113 Lactobacillus reuteri DSM 20016 thymidine phosphorylase YP_001270722.1 139204 D 557436 CDS YP_001270723.1 148543353 5189752 140523..141233 1 NC_009513.1 TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase, family 1; purine nucleoside phosphorylase 141233 5189752 Lreu_0114 Lactobacillus reuteri DSM 20016 purine nucleoside phosphorylase YP_001270723.1 140523 D 557436 CDS YP_001270724.1 148543354 5189782 141343..142275 1 NC_009513.1 PFAM: sugar-binding domain protein; DeoR family transcriptional regulator 142275 5189782 Lreu_0115 Lactobacillus reuteri DSM 20016 DeoR family transcriptional regulator YP_001270724.1 141343 D 557436 CDS YP_001270725.1 148543355 5189780 142359..143501 1 NC_009513.1 PFAM: IMP dehydrogenase/GMP reductase; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; inosine-5'-monophosphate dehydrogenase 143501 5189780 Lreu_0116 Lactobacillus reuteri DSM 20016 inosine-5'-monophosphate dehydrogenase YP_001270725.1 142359 D 557436 CDS YP_001270726.1 148543356 5189909 143682..144371 1 NC_009513.1 PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 144371 5189909 Lreu_0117 Lactobacillus reuteri DSM 20016 two component transcriptional regulator YP_001270726.1 143682 D 557436 CDS YP_001270727.1 148543357 5189692 144403..145548 1 NC_009513.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase 145548 5189692 Lreu_0118 Lactobacillus reuteri DSM 20016 integral membrane sensor signal transduction histidine kinase YP_001270727.1 144403 D 557436 CDS YP_001270728.1 148543358 5189590 145684..146592 1 NC_009513.1 PFAM: AzlC family protein; AzlC family protein 146592 5189590 Lreu_0119 Lactobacillus reuteri DSM 20016 AzlC family protein YP_001270728.1 145684 D 557436 CDS YP_001270729.1 148543359 5188923 146595..146939 1 NC_009513.1 PFAM: branched-chain amino acid transport; branched-chain amino acid transporter 146939 5188923 Lreu_0120 Lactobacillus reuteri DSM 20016 branched-chain amino acid transporter YP_001270729.1 146595 D 557436 CDS YP_001270730.1 148543360 5189460 147035..147766 1 NC_009513.1 transcriptional regulator-like protein 147766 5189460 Lreu_0121 Lactobacillus reuteri DSM 20016 transcriptional regulator-like protein YP_001270730.1 147035 D 557436 CDS YP_001270731.1 148543361 5189459 147741..147908 1 NC_009513.1 hypothetical protein 147908 5189459 Lreu_0122 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270731.1 147741 D 557436 CDS YP_001270732.1 148543362 5188969 148253..149182 1 NC_009513.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 149182 pyrB 5188969 pyrB Lactobacillus reuteri DSM 20016 aspartate carbamoyltransferase catalytic subunit YP_001270732.1 148253 D 557436 CDS YP_001270733.1 148543363 5189517 149196..150488 1 NC_009513.1 TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; dihydroorotase 150488 5189517 Lreu_0124 Lactobacillus reuteri DSM 20016 dihydroorotase YP_001270733.1 149196 D 557436 CDS YP_001270734.1 148543364 5188778 150488..151414 1 NC_009513.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B 151414 5188778 Lreu_0125 Lactobacillus reuteri DSM 20016 dihydroorotate dehydrogenase 1B YP_001270734.1 150488 D 557436 CDS YP_001270735.1 148543365 5189945 151411..152142 1 NC_009513.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine-5'-phosphate decarboxylase 152142 5189945 Lreu_0126 Lactobacillus reuteri DSM 20016 orotidine-5'-phosphate decarboxylase YP_001270735.1 151411 D 557436 CDS YP_001270736.1 148543366 5189454 152139..152780 1 NC_009513.1 TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; orotate phosphoribosyltransferase 152780 5189454 Lreu_0127 Lactobacillus reuteri DSM 20016 orotate phosphoribosyltransferase YP_001270736.1 152139 D 557436 CDS YP_001270737.1 148543367 5188864 complement(152852..153493) 1 NC_009513.1 phosphatase/phosphohexomutase-like protein 153493 5188864 Lreu_0128 Lactobacillus reuteri DSM 20016 phosphatase/phosphohexomutase-like protein YP_001270737.1 152852 R 557436 CDS YP_001270738.1 148543368 5189652 complement(153636..154847) 1 NC_009513.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; cyclopropane-fatty-acyl-phospholipid synthase 154847 5189652 Lreu_0129 Lactobacillus reuteri DSM 20016 cyclopropane-fatty-acyl-phospholipid synthase YP_001270738.1 153636 R 557436 CDS YP_001270739.1 148543369 5189578 154983..156008 1 NC_009513.1 PFAM: protein of unknown function UPF0118; hypothetical protein 156008 5189578 Lreu_0130 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270739.1 154983 D 557436 CDS YP_001270740.1 148543370 5189700 156185..157846 1 NC_009513.1 catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase 157846 5189700 Lreu_0131 Lactobacillus reuteri DSM 20016 formate--tetrahydrofolate ligase YP_001270740.1 156185 D 557436 CDS YP_001270741.1 148543371 5189674 158040..159719 1 NC_009513.1 catalyzes the formation of 2-acetolactate from pyruvate in stationary phase; acetolactate synthase 159719 5189674 Lreu_0132 Lactobacillus reuteri DSM 20016 acetolactate synthase YP_001270741.1 158040 D 557436 CDS YP_001270742.1 148543372 5188730 159736..160452 1 NC_009513.1 PFAM: alpha-acetolactate decarboxylase; acetolactate decarboxylase 160452 5188730 Lreu_0133 Lactobacillus reuteri DSM 20016 acetolactate decarboxylase YP_001270742.1 159736 D 557436 CDS YP_001270743.1 148543373 5189258 160637..161122 1 NC_009513.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 161122 5189258 Lreu_0134 Lactobacillus reuteri DSM 20016 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_001270743.1 160637 D 557436 CDS YP_001270744.1 148543374 5189508 161178..162239 1 NC_009513.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 162239 5189508 Lreu_0135 Lactobacillus reuteri DSM 20016 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_001270744.1 161178 D 557436 CDS YP_001270745.1 148543375 5189894 162311..163606 1 NC_009513.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 163606 5189894 Lreu_0136 Lactobacillus reuteri DSM 20016 adenylosuccinate lyase YP_001270745.1 162311 D 557436 CDS YP_001270746.1 148543376 5190149 163830..164549 1 NC_009513.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 164549 5190149 Lreu_0137 Lactobacillus reuteri DSM 20016 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_001270746.1 163830 D 557436 CDS YP_001270747.1 148543377 5189984 164550..164798 1 NC_009513.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; phosphoribosylformylglycinamidine synthase subunit PurS 164798 5189984 Lreu_0138 Lactobacillus reuteri DSM 20016 phosphoribosylformylglycinamidine synthase subunit PurS YP_001270747.1 164550 D 557436 CDS YP_001270748.1 148543378 5188980 164799..165479 1 NC_009513.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 165479 5188980 Lreu_0139 Lactobacillus reuteri DSM 20016 phosphoribosylformylglycinamidine synthase I YP_001270748.1 164799 D 557436 CDS YP_001270749.1 148543379 5189635 165483..167711 1 NC_009513.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 167711 5189635 Lreu_0140 Lactobacillus reuteri DSM 20016 phosphoribosylformylglycinamidine synthase II YP_001270749.1 165483 D 557436 CDS YP_001270750.1 148543380 5189588 167687..169141 1 NC_009513.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 169141 5189588 Lreu_0141 Lactobacillus reuteri DSM 20016 amidophosphoribosyltransferase YP_001270750.1 167687 D 557436 CDS YP_001270751.1 148543381 5190126 169146..170183 1 NC_009513.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 170183 5190126 Lreu_0142 Lactobacillus reuteri DSM 20016 phosphoribosylaminoimidazole synthetase YP_001270751.1 169146 D 557436 CDS YP_001270752.1 148543382 5189617 170193..170765 1 NC_009513.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; phosphoribosylglycinamide formyltransferase 170765 5189617 Lreu_0143 Lactobacillus reuteri DSM 20016 phosphoribosylglycinamide formyltransferase YP_001270752.1 170193 D 557436 CDS YP_001270753.1 148543383 5189507 170769..172307 1 NC_009513.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 172307 purH 5189507 purH Lactobacillus reuteri DSM 20016 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_001270753.1 170769 D 557436 CDS YP_001270754.1 148543384 5189575 172323..173582 1 NC_009513.1 TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase; phosphoribosylamine--glycine ligase 173582 5189575 Lreu_0145 Lactobacillus reuteri DSM 20016 phosphoribosylamine--glycine ligase YP_001270754.1 172323 D 557436 CDS YP_001270755.1 148543385 5189190 173678..174364 1 NC_009513.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 174364 gpmA 5189190 gpmA Lactobacillus reuteri DSM 20016 phosphoglyceromutase YP_001270755.1 173678 D 557436 CDS YP_001270756.1 148543386 5188973 174532..175581 1 NC_009513.1 hypothetical protein 175581 5188973 Lreu_0147 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270756.1 174532 D 557436 CDS YP_001270757.1 148543387 5188788 175934..177184 1 NC_009513.1 TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase, class Ib; RNA-binding S4 domain protein; tyrosyl-tRNA synthetase 177184 5188788 Lreu_0148 Lactobacillus reuteri DSM 20016 tyrosyl-tRNA synthetase YP_001270757.1 175934 D 557436 CDS YP_001270758.1 148543388 5189639 182964..183152 1 NC_009513.1 hypothetical protein 183152 5189639 Lreu_0149 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270758.1 182964 D 557436 CDS YP_001270759.1 148543389 5189987 183142..183498 1 NC_009513.1 PFAM: IS66 Orf2 family protein; IS66 Orf2 family protein 183498 5189987 Lreu_0150 Lactobacillus reuteri DSM 20016 IS66 Orf2 family protein YP_001270759.1 183142 D 557436 CDS YP_001270760.1 148543390 5189724 183565..185094 1 NC_009513.1 PFAM: transposase IS66; transposase IS66 185094 5189724 Lreu_0151 Lactobacillus reuteri DSM 20016 transposase IS66 YP_001270760.1 183565 D 557436 CDS YP_001270761.1 148543391 5189521 185377..185934 1 NC_009513.1 transposase 185934 5189521 Lreu_0152 Lactobacillus reuteri DSM 20016 transposase YP_001270761.1 185377 D 557436 CDS YP_001270762.1 148543392 5189011 complement(186527..187495) 1 NC_009513.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 187495 5189011 Lreu_0153 Lactobacillus reuteri DSM 20016 integrase catalytic subunit YP_001270762.1 186527 R 557436 CDS YP_001270763.1 148543393 5190003 187695..188411 1 NC_009513.1 PFAM: NUDIX hydrolase; NUDIX hydrolase 188411 5190003 Lreu_0154 Lactobacillus reuteri DSM 20016 NUDIX hydrolase YP_001270763.1 187695 D 557436 CDS YP_001270764.1 148543394 5189934 188513..189946 1 NC_009513.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 189946 5189934 Lreu_0155 Lactobacillus reuteri DSM 20016 nicotinate phosphoribosyltransferase YP_001270764.1 188513 D 557436 CDS YP_001270765.1 148543395 5190154 189959..190507 1 NC_009513.1 PFAM: isochorismatase hydrolase; isochorismatase hydrolase 190507 5190154 Lreu_0156 Lactobacillus reuteri DSM 20016 isochorismatase hydrolase YP_001270765.1 189959 D 557436 CDS YP_001270766.1 148543396 5189391 190867..191952 1 NC_009513.1 PFAM: ADP-ribosylation/Crystallin J1; ADP-ribosylation/crystallin J1 191952 5189391 Lreu_0157 Lactobacillus reuteri DSM 20016 ADP-ribosylation/crystallin J1 YP_001270766.1 190867 D 557436 CDS YP_001270767.1 148543397 5189552 191972..193324 1 NC_009513.1 PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; cytosine/purines uracil thiamine allantoin permease 193324 5189552 Lreu_0158 Lactobacillus reuteri DSM 20016 cytosine/purines uracil thiamine allantoin permease YP_001270767.1 191972 D 557436 CDS YP_001270768.1 148543398 5190075 193330..194217 1 NC_009513.1 PFAM: PfkB domain protein; ribokinase-like domain-containing protein 194217 5190075 Lreu_0159 Lactobacillus reuteri DSM 20016 ribokinase-like domain-containing protein YP_001270768.1 193330 D 557436 CDS YP_001270769.1 148543399 5189668 194345..194590 1 NC_009513.1 PFAM: helix-turn-helix, HxlR type; HxlR family transcriptional regulator 194590 5189668 Lreu_0160 Lactobacillus reuteri DSM 20016 HxlR family transcriptional regulator YP_001270769.1 194345 D 557436 CDS YP_001270770.1 148543400 5189712 195009..196331 1 NC_009513.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; major facilitator superfamily transporter 196331 5189712 Lreu_0161 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001270770.1 195009 D 557436 CDS YP_001270771.1 148543401 5188936 complement(196490..197230) 1 NC_009513.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 197230 5188936 Lreu_0162 Lactobacillus reuteri DSM 20016 short-chain dehydrogenase/reductase SDR YP_001270771.1 196490 R 557436 CDS YP_001270772.1 148543402 5189902 197338..197565 1 NC_009513.1 hypothetical protein 197565 5189902 Lreu_0163 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270772.1 197338 D 557436 CDS YP_001270773.1 148543403 5189877 197644..198294 1 NC_009513.1 PFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 198294 5189877 Lreu_0164 Lactobacillus reuteri DSM 20016 dihydrodipicolinate reductase YP_001270773.1 197644 D 557436 CDS YP_001270774.1 148543404 5189754 complement(198360..198593) 1 NC_009513.1 PFAM: cytochrome b5; cytochrome b5 198593 5189754 Lreu_0165 Lactobacillus reuteri DSM 20016 cytochrome b5 YP_001270774.1 198360 R 557436 CDS YP_001270775.1 148543405 5188592 complement(198736..200154) 1 NC_009513.1 PFAM: Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 200154 5188592 Lreu_0166 Lactobacillus reuteri DSM 20016 Na+/H+ antiporter NhaC YP_001270775.1 198736 R 557436 CDS YP_001270776.1 148543406 5188802 complement(202132..202674) 1 NC_009513.1 PFAM: protein of unknown function DUF1234; hypothetical protein 202674 5188802 Lreu_0169 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270776.1 202132 R 557436 CDS YP_001270777.1 148543407 5189013 complement(202686..203087) 1 NC_009513.1 phosphate-starvation-inducible protein PsiE 203087 5189013 Lreu_0170 Lactobacillus reuteri DSM 20016 phosphate-starvation-inducible protein PsiE YP_001270777.1 202686 R 557436 CDS YP_001270778.1 148543408 5189396 203219..203989 1 NC_009513.1 PFAM: triosephosphate isomerase; triosephosphate isomerase 203989 5189396 Lreu_0171 Lactobacillus reuteri DSM 20016 triosephosphate isomerase YP_001270778.1 203219 D 557436 CDS YP_001270779.1 148543409 5189679 204267..205220 1 NC_009513.1 PFAM: aldo/keto reductase; aldo/keto reductase 205220 5189679 Lreu_0172 Lactobacillus reuteri DSM 20016 aldo/keto reductase YP_001270779.1 204267 D 557436 CDS YP_001270780.1 148543410 5189689 205220..205720 1 NC_009513.1 SMART: phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 205720 5189689 Lreu_0173 Lactobacillus reuteri DSM 20016 PA-phosphatase-like phosphoesterase YP_001270780.1 205220 D 557436 CDS YP_001270781.1 148543411 5188580 205741..208590 1 NC_009513.1 PFAM: helicase domain protein; type III restriction protein, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; type III restriction protein, res subunit 208590 5188580 Lreu_0174 Lactobacillus reuteri DSM 20016 type III restriction protein, res subunit YP_001270781.1 205741 D 557436 CDS YP_001270782.1 148543412 5188965 208652..208939 1 NC_009513.1 hypothetical protein 208939 5188965 Lreu_0175 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270782.1 208652 D 557436 CDS YP_001270783.1 148543413 5189616 complement(209066..210421) 1 NC_009513.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; pyridine nucleotide-disulfide oxidoreductase dimerisation subunit 210421 5189616 Lreu_0176 Lactobacillus reuteri DSM 20016 pyridine nucleotide-disulfide oxidoreductase dimerisation subunit YP_001270783.1 209066 R 557436 CDS YP_001270784.1 148543414 5188948 210708..211028 1 NC_009513.1 hypothetical protein 211028 5188948 Lreu_0177 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270784.1 210708 D 557436 CDS YP_001270785.1 148543415 5188753 211137..211841 1 NC_009513.1 hypothetical protein 211841 5188753 Lreu_0178 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270785.1 211137 D 557436 CDS YP_001270786.1 148543416 5188986 211917..212651 1 NC_009513.1 PFAM: peptidase M10A and M12B, matrixin and adamalysin; peptidase M10A and M12B, matrixin and adamalysin 212651 5188986 Lreu_0179 Lactobacillus reuteri DSM 20016 peptidase M10A and M12B, matrixin and adamalysin YP_001270786.1 211917 D 557436 CDS YP_001270787.1 148543417 5189010 complement(212835..214643) 1 NC_009513.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; heavy metal translocating P-type ATPase 214643 5189010 Lreu_0180 Lactobacillus reuteri DSM 20016 heavy metal translocating P-type ATPase YP_001270787.1 212835 R 557436 CDS YP_001270788.1 148543418 5189915 214747..215934 1 NC_009513.1 PFAM: metalloenzyme domain protein; Phosphopentomutase N-terminal domain protein; phosphopentomutase 215934 5189915 Lreu_0181 Lactobacillus reuteri DSM 20016 phosphopentomutase YP_001270788.1 214747 D 557436 CDS YP_001270789.1 148543419 5188876 complement(216153..217007) 1 NC_009513.1 PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; 3-beta hydroxysteroid dehydrogenase/isomerase 217007 5188876 Lreu_0182 Lactobacillus reuteri DSM 20016 3-beta hydroxysteroid dehydrogenase/isomerase YP_001270789.1 216153 R 557436 CDS YP_001270790.1 148543420 5189397 complement(217010..217330) 1 NC_009513.1 PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator 217330 5189397 Lreu_0183 Lactobacillus reuteri DSM 20016 BadM/Rrf2 family transcriptional regulator YP_001270790.1 217010 R 557436 CDS YP_001270791.1 148543421 5190128 217613..218512 1 NC_009513.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein 218512 5190128 Lreu_0184 Lactobacillus reuteri DSM 20016 glycine betaine ABC transporter substrate-binding protein YP_001270791.1 217613 D 557436 CDS YP_001270792.1 148543422 5188727 218579..219244 1 NC_009513.1 PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 219244 5188727 Lreu_0185 Lactobacillus reuteri DSM 20016 binding-protein-dependent transport system inner membrane protein YP_001270792.1 218579 D 557436 CDS YP_001270793.1 148543423 5189830 219219..219989 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 219989 5189830 Lreu_0186 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001270793.1 219219 D 557436 CDS YP_001270794.1 148543424 5188987 219982..220620 1 NC_009513.1 PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 220620 5188987 Lreu_0187 Lactobacillus reuteri DSM 20016 binding-protein-dependent transport system inner membrane protein YP_001270794.1 219982 D 557436 CDS YP_001270795.1 148543425 5188731 220692..221120 1 NC_009513.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 221120 5188731 Lreu_0188 Lactobacillus reuteri DSM 20016 methionine-R-sulfoxide reductase YP_001270795.1 220692 D 557436 CDS YP_001270796.1 148543426 5189886 complement(221184..222521) 1 NC_009513.1 PFAM: Chloride channel, core; chloride channel protein 222521 5189886 Lreu_0189 Lactobacillus reuteri DSM 20016 chloride channel protein YP_001270796.1 221184 R 557436 CDS YP_001270797.1 148543427 5189845 complement(222868..224013) 1 NC_009513.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 224013 5189845 Lreu_0190 Lactobacillus reuteri DSM 20016 succinyl-diaminopimelate desuccinylase YP_001270797.1 222868 R 557436 CDS YP_001270798.1 148543428 5188809 complement(224032..224721) 1 NC_009513.1 PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 224721 5188809 Lreu_0191 Lactobacillus reuteri DSM 20016 binding-protein-dependent transport system inner membrane protein YP_001270798.1 224032 R 557436 CDS YP_001270799.1 148543429 5189111 complement(224714..225778) 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 225778 5189111 Lreu_0192 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001270799.1 224714 R 557436 CDS YP_001270800.1 148543430 5189476 complement(225791..226642) 1 NC_009513.1 PFAM: NLPA lipoprotein; NLPA lipoprotein 226642 5189476 Lreu_0193 Lactobacillus reuteri DSM 20016 NLPA lipoprotein YP_001270800.1 225791 R 557436 CDS YP_001270801.1 148543431 5189615 227163..228095 1 NC_009513.1 PFAM: Lactate/malate dehydrogenase; lactate dehydrogenase 228095 5189615 Lreu_0194 Lactobacillus reuteri DSM 20016 lactate dehydrogenase YP_001270801.1 227163 D 557436 CDS YP_001270802.1 148543432 5189624 228242..229438 1 NC_009513.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; major facilitator superfamily transporter 229438 5189624 Lreu_0195 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001270802.1 228242 D 557436 CDS YP_001270803.1 148543433 5189694 complement(229520..229813) 1 NC_009513.1 PFAM: FMN-binding domain protein; FMN-binding domain-containing protein 229813 5189694 Lreu_0196 Lactobacillus reuteri DSM 20016 FMN-binding domain-containing protein YP_001270803.1 229520 R 557436 CDS YP_001270804.1 148543434 5189480 complement(229825..230466) 1 NC_009513.1 TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; DNA-(apurinic or apyrimidinic site) lyase / endonuclease III 230466 5189480 Lreu_0197 Lactobacillus reuteri DSM 20016 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III YP_001270804.1 229825 R 557436 CDS YP_001270805.1 148543435 5188836 230764..232236 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 232236 5188836 Lreu_0198 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001270805.1 230764 D 557436 CDS YP_001270806.1 148543436 5188558 232199..233560 1 NC_009513.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 233560 5188558 Lreu_0199 Lactobacillus reuteri DSM 20016 4-aminobutyrate aminotransferase YP_001270806.1 232199 D 557436 CDS YP_001270807.1 148543437 5189610 233843..235012 1 NC_009513.1 PFAM: sodium/hydrogen exchanger; sodium/hydrogen exchanger 235012 5189610 Lreu_0200 Lactobacillus reuteri DSM 20016 sodium/hydrogen exchanger YP_001270807.1 233843 D 557436 CDS YP_001270808.1 148543438 5188971 235025..237343 1 NC_009513.1 superfamily I DNA/RNA helicase-like protein 237343 5188971 Lreu_0201 Lactobacillus reuteri DSM 20016 superfamily I DNA/RNA helicase-like protein YP_001270808.1 235025 D 557436 CDS YP_001270809.1 148543439 5188825 237431..237874 1 NC_009513.1 PFAM: nucleoside diphosphate kinase; nucleoside diphosphate kinase 237874 5188825 Lreu_0202 Lactobacillus reuteri DSM 20016 nucleoside diphosphate kinase YP_001270809.1 237431 D 557436 CDS YP_001270810.1 148543440 5188803 complement(237926..238885) 1 NC_009513.1 PFAM: DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 238885 5188803 Lreu_0203 Lactobacillus reuteri DSM 20016 DNA methylase N-4/N-6 domain-containing protein YP_001270810.1 237926 R 557436 CDS YP_001270811.1 148543441 5189696 239163..240185 1 NC_009513.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase II 240185 5189696 Lreu_0204 Lactobacillus reuteri DSM 20016 tryptophanyl-tRNA synthetase II YP_001270811.1 239163 D 557436 CDS YP_001270812.1 148543442 5189009 240332..241270 1 NC_009513.1 PFAM: Ppx/GppA phosphatase; Ppx/GppA phosphatase 241270 5189009 Lreu_0205 Lactobacillus reuteri DSM 20016 Ppx/GppA phosphatase YP_001270812.1 240332 D 557436 CDS YP_001270813.1 148543443 5188737 241263..242525 1 NC_009513.1 TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; 3-hydroxy-3-methylglutaryl-coenzyme A reductase 242525 5188737 Lreu_0206 Lactobacillus reuteri DSM 20016 3-hydroxy-3-methylglutaryl-coenzyme A reductase YP_001270813.1 241263 D 557436 CDS YP_001270814.1 148543444 5189836 242518..243477 1 NC_009513.1 hypothetical protein 243477 5189836 Lreu_0207 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270814.1 242518 D 557436 CDS YP_001270815.1 148543445 5188814 243483..244181 1 NC_009513.1 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 244181 5188814 Lreu_0208 Lactobacillus reuteri DSM 20016 NAD-dependent deacetylase YP_001270815.1 243483 D 557436 CDS YP_001270816.1 148543446 5189128 244630..245478 1 NC_009513.1 PFAM: protein of unknown function DUF72; hypothetical protein 245478 5189128 Lreu_0209 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270816.1 244630 D 557436 CDS YP_001270817.1 148543447 5188883 245556..247583 1 NC_009513.1 TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: t-RNA-binding domain protein; tRNA synthetase class I (M); methionyl-tRNA synthetase 247583 5188883 Lreu_0210 Lactobacillus reuteri DSM 20016 methionyl-tRNA synthetase YP_001270817.1 245556 D 557436 CDS YP_001270818.1 148543448 5188798 247585..248394 1 NC_009513.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; TatD family hydrolase 248394 5188798 Lreu_0211 Lactobacillus reuteri DSM 20016 TatD family hydrolase YP_001270818.1 247585 D 557436 CDS YP_001270819.1 148543449 5189573 248391..248957 1 NC_009513.1 TIGRFAM: primase/topoisomerase like protein; PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein; ribonuclease M5 248957 5189573 Lreu_0212 Lactobacillus reuteri DSM 20016 ribonuclease M5 YP_001270819.1 248391 D 557436 CDS YP_001270820.1 148543450 5189260 248950..249843 1 NC_009513.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 249843 ksgA 5189260 ksgA Lactobacillus reuteri DSM 20016 dimethyladenosine transferase YP_001270820.1 248950 D 557436 CDS YP_001270821.1 148543451 5188880 249934..250176 1 NC_009513.1 PFAM: protein of unknown function DUF1021; hypothetical protein 250176 5188880 Lreu_0214 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270821.1 249934 D 557436 CDS YP_001270822.1 148543452 5189027 250362..251213 1 NC_009513.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 251213 ipk 5189027 ipk Lactobacillus reuteri DSM 20016 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_001270822.1 250362 D 557436 CDS YP_001270823.1 148543453 5189421 251353..252264 1 NC_009513.1 PFAM: periplasmic solute binding protein; periplasmic solute binding protein 252264 5189421 Lreu_0216 Lactobacillus reuteri DSM 20016 periplasmic solute binding protein YP_001270823.1 251353 D 557436 CDS YP_001270824.1 148543454 5188773 252272..252943 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 252943 5188773 Lreu_0217 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001270824.1 252272 D 557436 CDS YP_001270825.1 148543455 5188804 252943..253740 1 NC_009513.1 PFAM: ABC-3 protein; ABC-3 protein 253740 5188804 Lreu_0218 Lactobacillus reuteri DSM 20016 ABC-3 protein YP_001270825.1 252943 D 557436 CDS YP_001270826.1 148543456 5189000 253972..254817 1 NC_009513.1 TIGRFAM: pur operon repressor; PFAM: phosphoribosyltransferase; purine repressor-like; pur operon repressor 254817 5189000 Lreu_0219 Lactobacillus reuteri DSM 20016 pur operon repressor YP_001270826.1 253972 D 557436 CDS YP_001270827.1 148543457 5189327 254821..256188 1 NC_009513.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 256188 glmU 5189327 glmU Lactobacillus reuteri DSM 20016 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_001270827.1 254821 D 557436 CDS YP_001270828.1 148543458 5189021 256263..257252 1 NC_009513.1 TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 257252 5189021 Lreu_0221 Lactobacillus reuteri DSM 20016 ribose-phosphate pyrophosphokinase YP_001270828.1 256263 D 557436 CDS YP_001270829.1 148543459 5188861 257428..258165 1 NC_009513.1 hypothetical protein 258165 5188861 Lreu_0222 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270829.1 257428 D 557436 CDS YP_001270830.1 148543460 5188972 complement(258244..259065) 1 NC_009513.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; cof family hydrolase 259065 5188972 Lreu_0223 Lactobacillus reuteri DSM 20016 cof family hydrolase YP_001270830.1 258244 R 557436 CDS YP_001270831.1 148543461 5189407 complement(259065..260432) 1 NC_009513.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 260432 5189407 Lreu_0224 Lactobacillus reuteri DSM 20016 metal dependent phosphohydrolase YP_001270831.1 259065 R 557436 CDS YP_001270832.1 148543462 5188740 complement(260434..261258) 1 NC_009513.1 PFAM: biotin/lipoate A/B protein ligase; biotin/lipoate A/B protein ligase 261258 5188740 Lreu_0225 Lactobacillus reuteri DSM 20016 biotin/lipoate A/B protein ligase YP_001270832.1 260434 R 557436 CDS YP_001270833.1 148543463 5188865 261522..261866 1 NC_009513.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 261866 5188865 Lreu_0226 Lactobacillus reuteri DSM 20016 transposase IS200-family protein YP_001270833.1 261522 D 557436 CDS YP_001270834.1 148543464 5188974 261866..263041 1 NC_009513.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase, IS891/IS1136/IS1341 family; transposase, IS605 OrfB; IS605 family transposase OrfB 263041 5188974 Lreu_0227 Lactobacillus reuteri DSM 20016 IS605 family transposase OrfB YP_001270834.1 261866 D 557436 CDS YP_001270835.1 148543465 5189676 263268..263666 1 NC_009513.1 PFAM: Domain of unknown function DUF1934; hypothetical protein 263666 5189676 Lreu_0228 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270835.1 263268 D 557436 CDS YP_001270836.1 148543466 5188766 263712..264269 1 NC_009513.1 participates in both the initiation and recycling phases of transcription; in the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; DNA-directed RNA polymerase subunit delta 264269 5188766 Lreu_0229 Lactobacillus reuteri DSM 20016 DNA-directed RNA polymerase subunit delta YP_001270836.1 263712 D 557436 CDS YP_001270837.1 148543467 5189630 264445..266049 1 NC_009513.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 266049 pyrG 5189630 pyrG Lactobacillus reuteri DSM 20016 CTP synthetase YP_001270837.1 264445 D 557436 CDS YP_001270838.1 148543468 5190105 266562..267944 1 NC_009513.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 267944 5190105 Lreu_0231 Lactobacillus reuteri DSM 20016 RNA-directed DNA polymerase YP_001270838.1 266562 D 557436 CDS YP_001270839.1 148543469 5188920 268228..269505 1 NC_009513.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 269505 5188920 Lreu_0232 Lactobacillus reuteri DSM 20016 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001270839.1 268228 D 557436 CDS YP_001270840.1 148543470 5189806 269598..269843 1 NC_009513.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 269843 rpmE2 5189806 rpmE2 Lactobacillus reuteri DSM 20016 50S ribosomal protein L31 YP_001270840.1 269598 D 557436 CDS YP_001270841.1 148543471 5189441 270005..271321 1 NC_009513.1 PTS system cellobiose-specific transporter subunit IIC-like protein 271321 5189441 Lreu_0234 Lactobacillus reuteri DSM 20016 PTS system cellobiose-specific transporter subunit IIC-like protein YP_001270841.1 270005 D 557436 CDS YP_001270842.1 148543472 5189925 271305..272195 1 NC_009513.1 PFAM: hydrolase family protein; hydrolase family protein 272195 5189925 Lreu_0235 Lactobacillus reuteri DSM 20016 hydrolase family protein YP_001270842.1 271305 D 557436 CDS YP_001270843.1 148543473 5188853 272245..272949 1 NC_009513.1 TIGRFAM: sortase family protein; PFAM: peptidase C60, sortase A and B; sortase family protein 272949 5188853 Lreu_0236 Lactobacillus reuteri DSM 20016 sortase family protein YP_001270843.1 272245 D 557436 CDS YP_001270844.1 148543474 5188895 273350..274129 1 NC_009513.1 PFAM: triosephosphate isomerase; triosephosphate isomerase 274129 5188895 Lreu_0237 Lactobacillus reuteri DSM 20016 triosephosphate isomerase YP_001270844.1 273350 D 557436 CDS YP_001270845.1 148543475 5189860 274141..275007 1 NC_009513.1 TIGRFAM: ketose-bisphosphate aldolase; fructose-1,6-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase, class-II; fructose-bisphosphate aldolase 275007 5189860 Lreu_0238 Lactobacillus reuteri DSM 20016 fructose-bisphosphate aldolase YP_001270845.1 274141 D 557436 CDS YP_001270846.1 148543476 5189659 275027..275683 1 NC_009513.1 PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 275683 5189659 Lreu_0239 Lactobacillus reuteri DSM 20016 phosphoglycerate mutase YP_001270846.1 275027 D 557436 CDS YP_001270847.1 148543477 5188749 complement(275722..276186) 1 NC_009513.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; protein tyrosine phosphatase 276186 5188749 Lreu_0240 Lactobacillus reuteri DSM 20016 protein tyrosine phosphatase YP_001270847.1 275722 R 557436 CDS YP_001270848.1 148543478 5189675 276316..276885 1 NC_009513.1 PFAM: LemA family protein; LemA family protein 276885 5189675 Lreu_0241 Lactobacillus reuteri DSM 20016 LemA family protein YP_001270848.1 276316 D 557436 CDS YP_001270849.1 148543479 5189646 276888..277784 1 NC_009513.1 metalloprotease; heat shock protein HtpX 277784 5189646 Lreu_0242 Lactobacillus reuteri DSM 20016 heat shock protein HtpX YP_001270849.1 276888 D 557436 CDS YP_001270850.1 148543480 5189765 277938..279317 1 NC_009513.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 279317 5189765 Lreu_0243 Lactobacillus reuteri DSM 20016 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_001270850.1 277938 D 557436 CDS YP_001270851.1 148543481 5189382 279389..280885 1 NC_009513.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase 280885 5189382 Lreu_0244 Lactobacillus reuteri DSM 20016 DEAD/DEAH box helicase YP_001270851.1 279389 D 557436 CDS YP_001270852.1 148543482 5189426 complement(280966..281802) 1 NC_009513.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 281802 5189426 Lreu_0245 Lactobacillus reuteri DSM 20016 integrase catalytic subunit YP_001270852.1 280966 R 557436 CDS YP_001270853.1 148543483 5189655 282268..283209 1 NC_009513.1 PFAM: glutaminase; glutaminase 283209 5189655 Lreu_0246 Lactobacillus reuteri DSM 20016 glutaminase YP_001270853.1 282268 D 557436 CDS YP_001270854.1 148543484 5189569 complement(283355..283813) 1 NC_009513.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 283813 5189569 Lreu_0247 Lactobacillus reuteri DSM 20016 transposase IS200-family protein YP_001270854.1 283355 R 557436 CDS YP_001270855.1 148543485 5189565 284469..285851 1 NC_009513.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 285851 5189565 Lreu_0248 Lactobacillus reuteri DSM 20016 RNA-directed DNA polymerase YP_001270855.1 284469 D 557436 CDS YP_001270856.1 148543486 5189537 complement(285935..287224) 1 NC_009513.1 PFAM: DltD, C-terminal domain protein; DltD, N-terminal domain protein; DltD, central domain protein; DltD C-terminal domain-containing protein 287224 5189537 Lreu_0249 Lactobacillus reuteri DSM 20016 DltD C-terminal domain-containing protein YP_001270856.1 285935 R 557436 CDS YP_001270857.1 148543487 5189389 complement(287217..287456) 1 NC_009513.1 TIGRFAM: D-alanyl carrier protein; PFAM: phosphopantetheine-binding; D-alanyl carrier protein 287456 5189389 Lreu_0250 Lactobacillus reuteri DSM 20016 D-alanyl carrier protein YP_001270857.1 287217 R 557436 CDS YP_001270858.1 148543488 5189691 complement(287476..288693) 1 NC_009513.1 PFAM: membrane bound O-acyl transferase, MBOAT family protein; membrane bound O-acyl transferase, MBOAT family protein 288693 5189691 Lreu_0251 Lactobacillus reuteri DSM 20016 membrane bound O-acyl transferase, MBOAT family protein YP_001270858.1 287476 R 557436 CDS YP_001270859.1 148543489 5189188 complement(288693..290219) 1 NC_009513.1 TIGRFAM: amino acid adenylation domain; D-alanine-activating enzyme; PFAM: AMP-dependent synthetase and ligase; D-alanine-activating enzyme 290219 5189188 Lreu_0252 Lactobacillus reuteri DSM 20016 D-alanine-activating enzyme YP_001270859.1 288693 R 557436 CDS YP_001270860.1 148543490 5189542 complement(290241..290381) 1 NC_009513.1 hypothetical protein 290381 5189542 Lreu_0253 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270860.1 290241 R 557436 CDS YP_001270861.1 148543491 5189789 290712..291074 1 NC_009513.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 291074 acpS 5189789 acpS Lactobacillus reuteri DSM 20016 4'-phosphopantetheinyl transferase YP_001270861.1 290712 D 557436 CDS YP_001270862.1 148543492 5189698 291074..292201 1 NC_009513.1 TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 292201 5189698 Lreu_0255 Lactobacillus reuteri DSM 20016 alanine racemase YP_001270862.1 291074 D 557436 CDS YP_001270863.1 148543493 5189821 292220..292594 1 NC_009513.1 PFAM: PemK family protein; transcriptional modulator of MazE/toxin MazF 292594 5189821 Lreu_0256 Lactobacillus reuteri DSM 20016 transcriptional modulator of MazE/toxin MazF YP_001270863.1 292220 D 557436 CDS YP_001270864.1 148543494 5189360 292785..294161 1 NC_009513.1 PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; cytosine/purines uracil thiamine allantoin permease 294161 5189360 Lreu_0257 Lactobacillus reuteri DSM 20016 cytosine/purines uracil thiamine allantoin permease YP_001270864.1 292785 D 557436 CDS YP_001270865.1 148543495 5188820 294152..295390 1 NC_009513.1 PFAM: amidohydrolase; Amidohydrolase 3; N-isopropylammelide isopropylaminohydrolase 295390 5188820 Lreu_0258 Lactobacillus reuteri DSM 20016 N-isopropylammelide isopropylaminohydrolase YP_001270865.1 294152 D 557436 CDS YP_001270866.1 148543496 5188851 295775..296566 1 NC_009513.1 PFAM: Hydratase/decarboxylase; hydratase/decarboxylase 296566 5188851 Lreu_0259 Lactobacillus reuteri DSM 20016 hydratase/decarboxylase YP_001270866.1 295775 D 557436 CDS YP_001270867.1 148543497 5188888 complement(296675..297313) 1 NC_009513.1 PFAM: CBS domain containing protein; hypothetical protein 297313 5188888 Lreu_0260 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270867.1 296675 R 557436 CDS YP_001270868.1 148543498 5189338 297519..298079 1 NC_009513.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 298079 5189338 Lreu_0261 Lactobacillus reuteri DSM 20016 peptidyl-tRNA hydrolase YP_001270868.1 297519 D 557436 CDS YP_001270869.1 148543499 5188946 298098..301637 1 NC_009513.1 TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; transcription-repair coupling factor 301637 5188946 Lreu_0262 Lactobacillus reuteri DSM 20016 transcription-repair coupling factor YP_001270869.1 298098 D 557436 CDS YP_001270870.1 148543500 5188837 301634..301906 1 NC_009513.1 PFAM: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 301906 5188837 Lreu_0263 Lactobacillus reuteri DSM 20016 RNA-binding S4 domain-containing protein YP_001270870.1 301634 D 557436 CDS YP_001270871.1 148543501 5189633 302007..302363 1 NC_009513.1 PFAM: Septum formation initiator; septum formation initiator 302363 5189633 Lreu_0264 Lactobacillus reuteri DSM 20016 septum formation initiator YP_001270871.1 302007 D 557436 CDS YP_001270872.1 148543502 5189409 302547..303041 1 NC_009513.1 PFAM: RNA binding S1 domain protein; RNA-binding S1 domain-containing protein 303041 5189409 Lreu_0265 Lactobacillus reuteri DSM 20016 RNA-binding S1 domain-containing protein YP_001270872.1 302547 D 557436 CDS YP_001270873.1 148543503 5189122 303043..304437 1 NC_009513.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; tRNA(Ile)-lysidine synthetase 304437 5189122 Lreu_0266 Lactobacillus reuteri DSM 20016 tRNA(Ile)-lysidine synthetase YP_001270873.1 303043 D 557436 CDS YP_001270874.1 148543504 5189837 304430..304972 1 NC_009513.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 304972 5189837 Lreu_0267 Lactobacillus reuteri DSM 20016 hypoxanthine phosphoribosyltransferase YP_001270874.1 304430 D 557436 CDS YP_001270875.1 148543505 5189944 305206..307314 1 NC_009513.1 TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 307314 5189944 Lreu_0268 Lactobacillus reuteri DSM 20016 ATP-dependent metalloprotease FtsH YP_001270875.1 305206 D 557436 CDS YP_001270876.1 148543506 5189939 307405..308325 1 NC_009513.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 308325 hslO 5189939 hslO Lactobacillus reuteri DSM 20016 Hsp33-like chaperonin YP_001270876.1 307405 D 557436 CDS YP_001270877.1 148543507 5188917 308433..309434 1 NC_009513.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; dihydroorotate dehydrogenase; nifR3 family TIM-barrel protein 309434 5188917 Lreu_0270 Lactobacillus reuteri DSM 20016 nifR3 family TIM-barrel protein YP_001270877.1 308433 D 557436 CDS YP_001270878.1 148543508 5189844 309455..310981 1 NC_009513.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; lysyl-tRNA synthetase 310981 5189844 Lreu_0271 Lactobacillus reuteri DSM 20016 lysyl-tRNA synthetase YP_001270878.1 309455 D 557436 CDS YP_001270879.1 148543509 5189748 311107..311640 1 NC_009513.1 hypothetical protein 311640 5189748 Lreu_0272 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270879.1 311107 D 557436 CDS YP_001270880.1 148543510 5189611 317731..317919 1 NC_009513.1 hypothetical protein 317919 5189611 Lreu_0273 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270880.1 317731 D 557436 CDS YP_001270881.1 148543511 5189917 317909..318265 1 NC_009513.1 PFAM: IS66 Orf2 family protein; IS66 Orf2 family protein 318265 5189917 Lreu_0274 Lactobacillus reuteri DSM 20016 IS66 Orf2 family protein YP_001270881.1 317909 D 557436 CDS YP_001270882.1 148543512 5188790 318336..319880 1 NC_009513.1 PFAM: transposase IS66; transposase IS66 319880 5188790 Lreu_0275 Lactobacillus reuteri DSM 20016 transposase IS66 YP_001270882.1 318336 D 557436 CDS YP_001270883.1 148543513 5189453 320936..321634 1 NC_009513.1 hypothetical protein 321634 5189453 Lreu_0276 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270883.1 320936 D 557436 CDS YP_001270884.1 148543514 5189787 321847..323346 1 NC_009513.1 TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor, type I/II extracellular region; amino acid/peptide transporter 323346 5189787 Lreu_0277 Lactobacillus reuteri DSM 20016 amino acid/peptide transporter YP_001270884.1 321847 D 557436 CDS YP_001270885.1 148543515 5189483 323403..324233 1 NC_009513.1 PFAM: metallophosphoesterase; metallophosphoesterase 324233 5189483 Lreu_0278 Lactobacillus reuteri DSM 20016 metallophosphoesterase YP_001270885.1 323403 D 557436 CDS YP_001270886.1 148543516 5189149 324592..325236 1 NC_009513.1 hypothetical protein 325236 5189149 Lreu_0279 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270886.1 324592 D 557436 CDS YP_001270887.1 148543517 5189856 325354..326754 1 NC_009513.1 PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter 326754 5189856 Lreu_0280 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001270887.1 325354 D 557436 CDS YP_001270888.1 148543518 5189012 326845..328494 1 NC_009513.1 TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; YidE/YbjL duplication 328494 5189012 Lreu_0281 Lactobacillus reuteri DSM 20016 YidE/YbjL duplication YP_001270888.1 326845 D 557436 CDS YP_001270889.1 148543519 5188777 328527..329237 1 NC_009513.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu racemase; aspartate racemase 329237 5188777 Lreu_0282 Lactobacillus reuteri DSM 20016 aspartate racemase YP_001270889.1 328527 D 557436 CDS YP_001270890.1 148543520 5188843 329403..330104 1 NC_009513.1 PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; GntR family transcriptional regulator 330104 5188843 Lreu_0283 Lactobacillus reuteri DSM 20016 GntR family transcriptional regulator YP_001270890.1 329403 D 557436 CDS YP_001270891.1 148543521 5189793 330166..331632 1 NC_009513.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 331632 5189793 Lreu_0284 Lactobacillus reuteri DSM 20016 nicotinate phosphoribosyltransferase YP_001270891.1 330166 D 557436 CDS YP_001270892.1 148543522 5190006 331645..332472 1 NC_009513.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 332472 nadE 5190006 nadE Lactobacillus reuteri DSM 20016 NAD synthetase YP_001270892.1 331645 D 557436 CDS YP_001270893.1 148543523 5188782 332535..334715 1 NC_009513.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; RNA-binding S1 domain-containing protein 334715 5188782 Lreu_0286 Lactobacillus reuteri DSM 20016 RNA-binding S1 domain-containing protein YP_001270893.1 332535 D 557436 CDS YP_001270894.1 148543524 5189937 334708..335160 1 NC_009513.1 PFAM: protein of unknown function DUF335, SprT; SMART: protein of unknown function SprT; hypothetical protein 335160 5189937 Lreu_0287 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270894.1 334708 D 557436 CDS YP_001270895.1 148543525 5188991 335463..337349 1 NC_009513.1 PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; glycoside hydrolase 337349 5188991 Lreu_0288 Lactobacillus reuteri DSM 20016 glycoside hydrolase YP_001270895.1 335463 D 557436 CDS YP_001270896.1 148543526 5190155 337333..338292 1 NC_009513.1 PFAM: glycoside hydrolase, family 42, domain 5, loop region; glycoside hydrolase family 42 338292 5190155 Lreu_0289 Lactobacillus reuteri DSM 20016 glycoside hydrolase family 42 YP_001270896.1 337333 D 557436 CDS YP_001270897.1 148543527 5190060 complement(338390..340159) 1 NC_009513.1 hypothetical protein 340159 5190060 Lreu_0290 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270897.1 338390 R 557436 CDS YP_001270898.1 148543528 5188746 340329..341039 1 NC_009513.1 TIGRFAM: phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 341039 5188746 Lreu_0291 Lactobacillus reuteri DSM 20016 phosphoglycerate mutase YP_001270898.1 340329 D 557436 CDS YP_001270899.1 148543529 5188811 341014..341880 1 NC_009513.1 esterase/lipase-like protein 341880 5188811 Lreu_0292 Lactobacillus reuteri DSM 20016 esterase/lipase-like protein YP_001270899.1 341014 D 557436 CDS YP_001270900.1 148543530 5188817 342146..343288 1 NC_009513.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class-III; cystathionine gamma-lyase 343288 5188817 Lreu_0293 Lactobacillus reuteri DSM 20016 cystathionine gamma-lyase YP_001270900.1 342146 D 557436 CDS YP_001270901.1 148543531 5190071 343315..344016 1 NC_009513.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane protein 344016 5190071 Lreu_0294 Lactobacillus reuteri DSM 20016 polar amino acid ABC transporter inner membrane protein YP_001270901.1 343315 D 557436 CDS YP_001270902.1 148543532 5190023 344022..344771 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 344771 5190023 Lreu_0295 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001270902.1 344022 D 557436 CDS YP_001270903.1 148543533 5190051 344787..345578 1 NC_009513.1 PFAM: extracellular solute-binding protein, family 3; extracellular solute-binding protein 345578 5190051 Lreu_0296 Lactobacillus reuteri DSM 20016 extracellular solute-binding protein YP_001270903.1 344787 D 557436 CDS YP_001270904.1 148543534 5189470 complement(345686..347026) 1 NC_009513.1 PFAM: peptidase C1B, bleomycin hydrolase; Bleomycin hydrolase 347026 5189470 Lreu_0297 Lactobacillus reuteri DSM 20016 Bleomycin hydrolase YP_001270904.1 345686 R 557436 CDS YP_001270905.1 148543535 5189757 complement(347055..347738) 1 NC_009513.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 347738 5189757 Lreu_0298 Lactobacillus reuteri DSM 20016 ribose-5-phosphate isomerase A YP_001270905.1 347055 R 557436 CDS YP_001270906.1 148543536 5190079 complement(347750..348046) 1 NC_009513.1 hypothetical protein 348046 5190079 Lreu_0299 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270906.1 347750 R 557436 CDS YP_001270907.1 148543537 5190004 348185..348721 1 NC_009513.1 PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase 348721 5190004 Lreu_0300 Lactobacillus reuteri DSM 20016 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_001270907.1 348185 D 557436 CDS YP_001270908.1 148543538 5189376 348746..350119 1 NC_009513.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 350119 5189376 Lreu_0301 Lactobacillus reuteri DSM 20016 DNA repair protein RadA YP_001270908.1 348746 D 557436 CDS YP_001270909.1 148543539 5189734 350147..351289 1 NC_009513.1 PFAM: PilT protein domain protein; SMART: Nucleotide binding protein, PINc; PilT domain-containing protein 351289 5189734 Lreu_0302 Lactobacillus reuteri DSM 20016 PilT domain-containing protein YP_001270909.1 350147 D 557436 CDS YP_001270910.1 148543540 5189701 351664..353076 1 NC_009513.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 353076 cysS 5189701 cysS Lactobacillus reuteri DSM 20016 cysteinyl-tRNA synthetase YP_001270910.1 351664 D 557436 CDS YP_001270911.1 148543541 5188332 353088..353501 1 NC_009513.1 PFAM: ribonuclease III; ribonuclease III 353501 5188332 Lreu_0304 Lactobacillus reuteri DSM 20016 ribonuclease III YP_001270911.1 353088 D 557436 CDS YP_001270912.1 148543542 5189699 353491..354240 1 NC_009513.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; RNA methyltransferase 354240 5189699 Lreu_0305 Lactobacillus reuteri DSM 20016 RNA methyltransferase YP_001270912.1 353491 D 557436 CDS YP_001270913.1 148543543 5190089 354455..354643 1 NC_009513.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 354643 secE 5190089 secE Lactobacillus reuteri DSM 20016 preprotein translocase subunit SecE YP_001270913.1 354455 D 557436 CDS YP_001270914.1 148543544 5188799 354762..355304 1 NC_009513.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein; transcription antitermination protein nusG 355304 5188799 Lreu_0307 Lactobacillus reuteri DSM 20016 transcription antitermination protein nusG YP_001270914.1 354762 D 557436 CDS YP_001270915.1 148543545 5189447 355444..355869 1 NC_009513.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 355869 rplK 5189447 rplK Lactobacillus reuteri DSM 20016 50S ribosomal protein L11 YP_001270915.1 355444 D 557436 CDS YP_001270916.1 148543546 5188842 355892..356653 1 NC_009513.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 356653 rplA 5188842 rplA Lactobacillus reuteri DSM 20016 50S ribosomal protein L1 YP_001270916.1 355892 D 557436 CDS YP_001270917.1 148543547 5189759 356831..358024 1 NC_009513.1 PFAM: aminotransferase, class I and II; GntR family transcriptional regulator 358024 5189759 Lreu_0310 Lactobacillus reuteri DSM 20016 GntR family transcriptional regulator YP_001270917.1 356831 D 557436 CDS YP_001270918.1 148543548 5189983 358500..359804 1 NC_009513.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 359804 5189983 Lreu_0311 Lactobacillus reuteri DSM 20016 glycosyl transferase family protein YP_001270918.1 358500 D 557436 CDS YP_001270919.1 148543549 5189085 359817..360938 1 NC_009513.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 360938 5189085 Lreu_0312 Lactobacillus reuteri DSM 20016 UDP-N-acetylglucosamine 2-epimerase YP_001270919.1 359817 D 557436 CDS YP_001270920.1 148543550 5189750 361136..361636 1 NC_009513.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 361636 rplJ 5189750 rplJ Lactobacillus reuteri DSM 20016 50S ribosomal protein L10 YP_001270920.1 361136 D 557436 CDS YP_001270921.1 148543551 5189851 361699..362064 1 NC_009513.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 362064 rplL 5189851 rplL Lactobacillus reuteri DSM 20016 50S ribosomal protein L7/L12 YP_001270921.1 361699 D 557436 CDS YP_001270922.1 148543552 5189609 complement(362252..362536) 1 NC_009513.1 hypothetical protein 362536 5189609 Lreu_0315 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270922.1 362252 R 557436 CDS YP_001270923.1 148543553 5188775 complement(362669..362899) 1 NC_009513.1 hypothetical protein 362899 5188775 Lreu_0316 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270923.1 362669 R 557436 CDS YP_001270924.1 148543554 5189704 complement(363033..363404) 1 NC_009513.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; large conductance mechanosensitive channel protein 363404 5189704 Lreu_0317 Lactobacillus reuteri DSM 20016 large conductance mechanosensitive channel protein YP_001270924.1 363033 R 557436 CDS YP_001270925.1 148543555 5189018 363594..363926 1 NC_009513.1 PFAM: transcriptional regulator PadR family protein; PadR family transcriptional regulator 363926 5189018 Lreu_0318 Lactobacillus reuteri DSM 20016 PadR family transcriptional regulator YP_001270925.1 363594 D 557436 CDS YP_001270926.1 148543556 5188733 363919..364530 1 NC_009513.1 hypothetical protein 364530 5188733 Lreu_0319 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270926.1 363919 D 557436 CDS YP_001270927.1 148543557 5190046 364531..365286 1 NC_009513.1 hypothetical protein 365286 5190046 Lreu_0320 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270927.1 364531 D 557436 CDS YP_001270928.1 148543558 5189831 complement(365374..368010) 1 NC_009513.1 PFAM: iron-containing alcohol dehydrogenase; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 368010 5189831 Lreu_0321 Lactobacillus reuteri DSM 20016 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_001270928.1 365374 R 557436 CDS YP_001270929.1 148543559 5188369 complement(368368..369387) 1 NC_009513.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 369387 nrdF 5188369 nrdF Lactobacillus reuteri DSM 20016 ribonucleotide-diphosphate reductase subunit beta YP_001270929.1 368368 R 557436 CDS YP_001270930.1 148543560 5189380 complement(369502..371673) 1 NC_009513.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 371673 5189380 Lreu_0323 Lactobacillus reuteri DSM 20016 ribonucleotide-diphosphate reductase subunit alpha YP_001270930.1 369502 R 557436 CDS YP_001270931.1 148543561 5188801 complement(371773..371994) 1 NC_009513.1 TIGRFAM: glutaredoxin-like protein NrdH; PFAM: glutaredoxin; ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit 371994 5188801 Lreu_0324 Lactobacillus reuteri DSM 20016 ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit YP_001270931.1 371773 R 557436 CDS YP_001270932.1 148543562 5189613 372252..372764 1 NC_009513.1 PFAM: CMP/dCMP deaminase, zinc-binding; tRNA-adenosine deaminase 372764 5189613 Lreu_0325 Lactobacillus reuteri DSM 20016 tRNA-adenosine deaminase YP_001270932.1 372252 D 557436 CDS YP_001270933.1 148543563 5188258 373037..374872 1 NC_009513.1 TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 374872 5188258 Lreu_0326 Lactobacillus reuteri DSM 20016 DNA polymerase III subunits gamma and tau YP_001270933.1 373037 D 557436 CDS YP_001270934.1 148543564 5189495 374893..375201 1 NC_009513.1 PFAM: conserved hypothetical protein 103; hypothetical protein 375201 5189495 Lreu_0327 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270934.1 374893 D 557436 CDS YP_001270935.1 148543565 5190038 375205..375807 1 NC_009513.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 375807 recR 5190038 recR Lactobacillus reuteri DSM 20016 recombination protein RecR YP_001270935.1 375205 D 557436 CDS YP_001270936.1 148543566 5190099 375812..376060 1 NC_009513.1 hypothetical protein 376060 5190099 Lreu_0329 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270936.1 375812 D 557436 CDS YP_001270937.1 148543567 5189072 376070..376711 1 NC_009513.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 376711 tmk 5189072 tmk Lactobacillus reuteri DSM 20016 thymidylate kinase YP_001270937.1 376070 D 557436 CDS YP_001270938.1 148543568 5189378 376731..377054 1 NC_009513.1 PFAM: protein of unknown function DUF970; hypothetical protein 377054 5189378 Lreu_0331 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270938.1 376731 D 557436 CDS YP_001270939.1 148543569 5189924 377069..378082 1 NC_009513.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 378082 5189924 Lreu_0332 Lactobacillus reuteri DSM 20016 DNA polymerase III subunit delta' YP_001270939.1 377069 D 557436 CDS YP_001270940.1 148543570 5188881 378093..378443 1 NC_009513.1 PFAM: protein of unknown function DUF972; hypothetical protein 378443 5188881 Lreu_0333 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270940.1 378093 D 557436 CDS YP_001270941.1 148543571 5188996 378452..379318 1 NC_009513.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase 379318 5188996 Lreu_0334 Lactobacillus reuteri DSM 20016 uroporphyrin-III C/tetrapyrrole methyltransferase YP_001270941.1 378452 D 557436 CDS YP_001270942.1 148543572 5188833 379328..380089 1 NC_009513.1 PFAM: acyl-ACP thioesterase; acyl-ACP thioesterase 380089 5188833 Lreu_0335 Lactobacillus reuteri DSM 20016 acyl-ACP thioesterase YP_001270942.1 379328 D 557436 CDS YP_001270943.1 148543573 5189618 380254..381768 1 NC_009513.1 exopolyphosphatase-like protein 381768 5189618 Lreu_0336 Lactobacillus reuteri DSM 20016 exopolyphosphatase-like protein YP_001270943.1 380254 D 557436 CDS YP_001270944.1 148543574 5188847 381770..384013 1 NC_009513.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 384013 5188847 Lreu_0337 Lactobacillus reuteri DSM 20016 polyphosphate kinase YP_001270944.1 381770 D 557436 CDS YP_001270945.1 148543575 5189626 384017..384988 1 NC_009513.1 PFAM: Ppx/GppA phosphatase; Ppx/GppA phosphatase 384988 5189626 Lreu_0338 Lactobacillus reuteri DSM 20016 Ppx/GppA phosphatase YP_001270945.1 384017 D 557436 CDS YP_001270946.1 148543576 5189589 385100..386095 1 NC_009513.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; UDP-galactose 4-epimerase 386095 5189589 Lreu_0339 Lactobacillus reuteri DSM 20016 UDP-galactose 4-epimerase YP_001270946.1 385100 D 557436 CDS YP_001270947.1 148543577 5189910 387728..388453 1 NC_009513.1 PFAM: peptidase M22, glycoprotease; peptidase M22, glycoprotease 388453 5189910 Lreu_0341 Lactobacillus reuteri DSM 20016 peptidase M22, glycoprotease YP_001270947.1 387728 D 557436 CDS YP_001270948.1 148543578 5189259 388437..388991 1 NC_009513.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ribosomal-protein-alanine acetyltransferase 388991 5189259 Lreu_0342 Lactobacillus reuteri DSM 20016 ribosomal-protein-alanine acetyltransferase YP_001270948.1 388437 D 557436 CDS YP_001270949.1 148543579 5189931 389010..390041 1 NC_009513.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 390041 5189931 Lreu_0343 Lactobacillus reuteri DSM 20016 DNA-binding/iron metalloprotein/AP endonuclease YP_001270949.1 389010 D 557436 CDS YP_001270950.1 148543580 5189810 complement(390158..390931) 1 NC_009513.1 TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; pyrroline-5-carboxylate reductase 390931 5189810 Lreu_0344 Lactobacillus reuteri DSM 20016 pyrroline-5-carboxylate reductase YP_001270950.1 390158 R 557436 CDS YP_001270951.1 148543581 5188822 complement(390949..392193) 1 NC_009513.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 392193 proA 5188822 proA Lactobacillus reuteri DSM 20016 gamma-glutamyl phosphate reductase YP_001270951.1 390949 R 557436 CDS YP_001270952.1 148543582 5189368 complement(392205..392993) 1 NC_009513.1 TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; glutamate 5-kinase 392993 5189368 Lreu_0346 Lactobacillus reuteri DSM 20016 glutamate 5-kinase YP_001270952.1 392205 R 557436 CDS YP_001270953.1 148543583 5188335 393587..394372 1 NC_009513.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 394372 5188335 Lreu_0347 Lactobacillus reuteri DSM 20016 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001270953.1 393587 D 557436 CDS YP_001270954.1 148543584 5188330 394386..395564 1 NC_009513.1 produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; transaminase 395564 5188330 Lreu_0348 Lactobacillus reuteri DSM 20016 transaminase YP_001270954.1 394386 D 557436 CDS YP_001270955.1 148543585 5189487 395578..396543 1 NC_009513.1 TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal domain protein; Ketopantoate reductase ApbA/PanE, C-terminal domain protein; 2-dehydropantoate 2-reductase 396543 5189487 Lreu_0349 Lactobacillus reuteri DSM 20016 2-dehydropantoate 2-reductase YP_001270955.1 395578 D 557436 CDS YP_001270956.1 148543586 5188587 complement(396620..398230) 1 NC_009513.1 PFAM: transposase, IS4 family protein; transposase, IS4 family protein 398230 5188587 Lreu_0350 Lactobacillus reuteri DSM 20016 transposase, IS4 family protein YP_001270956.1 396620 R 557436 CDS YP_001270957.1 148543587 5188585 complement(398374..400311) 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 400311 5188585 Lreu_0351 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001270957.1 398374 R 557436 CDS YP_001270958.1 148543588 5189775 400552..401196 1 NC_009513.1 modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex 401196 5189775 Lreu_0352 Lactobacillus reuteri DSM 20016 redox-sensing transcriptional repressor Rex YP_001270958.1 400552 D 557436 CDS YP_001270959.1 148543589 5189776 401431..401715 1 NC_009513.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 401715 groES 5189776 groES Lactobacillus reuteri DSM 20016 co-chaperonin GroES YP_001270959.1 401431 D 557436 CDS YP_001270960.1 148543590 5189364 401807..403435 1 NC_009513.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 403435 groEL 5189364 groEL Lactobacillus reuteri DSM 20016 chaperonin GroEL YP_001270960.1 401807 D 557436 CDS YP_001270961.1 148543591 5189456 403529..404017 1 NC_009513.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; Ala-tRNA(Pro) hydrolase 404017 5189456 Lreu_0355 Lactobacillus reuteri DSM 20016 Ala-tRNA(Pro) hydrolase YP_001270961.1 403529 D 557436 CDS YP_001270962.1 148543592 5188752 404099..405709 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 405709 5188752 Lreu_0356 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001270962.1 404099 D 557436 CDS YP_001270963.1 148543593 5189451 405794..407632 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 407632 5189451 Lreu_0357 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001270963.1 405794 D 557436 CDS YP_001270964.1 148543594 5189731 407659..407919 1 NC_009513.1 hypothetical protein 407919 5189731 Lreu_0358 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270964.1 407659 D 557436 CDS YP_001270965.1 148543595 5188256 408038..408448 1 NC_009513.1 PFAM: regulatory protein, MarR; MarR family transcriptional regulator 408448 5188256 Lreu_0359 Lactobacillus reuteri DSM 20016 MarR family transcriptional regulator YP_001270965.1 408038 D 557436 CDS YP_001270966.1 148543596 5188785 408448..409833 1 NC_009513.1 PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter 409833 5188785 Lreu_0360 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001270966.1 408448 D 557436 CDS YP_001270967.1 148543597 5190069 complement(409876..410508) 1 NC_009513.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; hypothetical protein 410508 5190069 Lreu_0361 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270967.1 409876 R 557436 CDS YP_001270968.1 148543598 5189450 410570..411901 1 NC_009513.1 PFAM: helicase domain protein; type III restriction protein, res subunit; SMART: DEAD-like helicases-like; helicase domain-containing protein 411901 5189450 Lreu_0362 Lactobacillus reuteri DSM 20016 helicase domain-containing protein YP_001270968.1 410570 D 557436 CDS YP_001270969.1 148543599 5188797 411882..412562 1 NC_009513.1 amidophosphoribosyltransferase-like protein 412562 5188797 Lreu_0363 Lactobacillus reuteri DSM 20016 amidophosphoribosyltransferase-like protein YP_001270969.1 411882 D 557436 CDS YP_001270970.1 148543600 5189658 412694..413242 1 NC_009513.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/30S ribosomal protein S30P 413242 5189658 Lreu_0364 Lactobacillus reuteri DSM 20016 sigma 54 modulation protein/30S ribosomal protein S30P YP_001270970.1 412694 D 557436 CDS YP_001270971.1 148543601 5189949 413454..415817 1 NC_009513.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: helicase domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; protein translocase subunit secA 415817 5189949 Lreu_0365 Lactobacillus reuteri DSM 20016 protein translocase subunit secA YP_001270971.1 413454 D 557436 CDS YP_001270972.1 148543602 5188919 416017..417015 1 NC_009513.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; peptide chain release factor 2 417015 5188919 Lreu_0366 Lactobacillus reuteri DSM 20016 peptide chain release factor 2 YP_001270972.1 416017 D 557436 CDS YP_001270973.1 148543603 5188921 417045..417380 1 NC_009513.1 PFAM: PspC domain protein; phage shock protein C 417380 5188921 Lreu_0367 Lactobacillus reuteri DSM 20016 phage shock protein C YP_001270973.1 417045 D 557436 CDS YP_001270974.1 148543604 5188858 417377..417736 1 NC_009513.1 PFAM: membrane protein of unknown function; hypothetical protein 417736 5188858 Lreu_0368 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270974.1 417377 D 557436 CDS YP_001270975.1 148543605 5189436 417751..418713 1 NC_009513.1 TIGRFAM: HPr(Ser) kinase/phosphatase; PFAM: HPr serine kinase domain protein; HPr kinase 418713 5189436 Lreu_0369 Lactobacillus reuteri DSM 20016 HPr kinase YP_001270975.1 417751 D 557436 CDS YP_001270976.1 148543606 5189834 418714..419541 1 NC_009513.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 419541 5189834 Lreu_0370 Lactobacillus reuteri DSM 20016 prolipoprotein diacylglyceryl transferase YP_001270976.1 418714 D 557436 CDS YP_001270977.1 148543607 5189746 419567..420583 1 NC_009513.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 420583 gpsA 5189746 gpsA Lactobacillus reuteri DSM 20016 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_001270977.1 419567 D 557436 CDS YP_001270978.1 148543608 5189647 420648..421562 1 NC_009513.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UDP-glucose pyrophosphorylase 421562 5189647 Lreu_0372 Lactobacillus reuteri DSM 20016 UDP-glucose pyrophosphorylase YP_001270978.1 420648 D 557436 CDS YP_001270979.1 148543609 5189581 complement(421634..422368) 1 NC_009513.1 PFAM: protein of unknown function DUF162; hypothetical protein 422368 5189581 Lreu_0373 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270979.1 421634 R 557436 CDS YP_001270980.1 148543610 5189742 complement(422361..423848) 1 NC_009513.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF162; iron-sulfur cluster binding protein 423848 5189742 Lreu_0374 Lactobacillus reuteri DSM 20016 iron-sulfur cluster binding protein YP_001270980.1 422361 R 557436 CDS YP_001270981.1 148543611 5188815 complement(423849..424718) 1 NC_009513.1 PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 424718 5188815 Lreu_0375 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270981.1 423849 R 557436 CDS YP_001270982.1 148543612 5188949 424915..425847 1 NC_009513.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; HI0933 family protein; thioredoxin reductase 425847 5188949 Lreu_0376 Lactobacillus reuteri DSM 20016 thioredoxin reductase YP_001270982.1 424915 D 557436 CDS YP_001270983.1 148543613 5189717 425941..427110 1 NC_009513.1 TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase 427110 5189717 Lreu_0377 Lactobacillus reuteri DSM 20016 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase YP_001270983.1 425941 D 557436 CDS YP_001270984.1 148543614 5188808 427369..428253 1 NC_009513.1 PFAM: extracellular solute-binding protein, family 3; extracellular solute-binding protein 428253 5188808 Lreu_0378 Lactobacillus reuteri DSM 20016 extracellular solute-binding protein YP_001270984.1 427369 D 557436 CDS YP_001270985.1 148543615 5189532 428299..428805 1 NC_009513.1 PFAM: thioesterase superfamily protein; thioesterase superfamily protein 428805 5189532 Lreu_0379 Lactobacillus reuteri DSM 20016 thioesterase superfamily protein YP_001270985.1 428299 D 557436 CDS YP_001270986.1 148543616 5189513 428895..430619 1 NC_009513.1 PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; alpha-phosphoglucomutase 430619 5189513 Lreu_0380 Lactobacillus reuteri DSM 20016 alpha-phosphoglucomutase YP_001270986.1 428895 D 557436 CDS YP_001270987.1 148543617 5189425 430786..431424 1 NC_009513.1 HD superfamily hydrolase-like protein 431424 5189425 Lreu_0381 Lactobacillus reuteri DSM 20016 HD superfamily hydrolase-like protein YP_001270987.1 430786 D 557436 CDS YP_001270988.1 148543618 5188852 431529..431801 1 NC_009513.1 hypothetical protein 431801 5188852 Lreu_0382 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270988.1 431529 D 557436 CDS YP_001270989.1 148543619 5189457 431966..434038 1 NC_009513.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 434038 5189457 Lreu_0383 Lactobacillus reuteri DSM 20016 excinuclease ABC subunit B YP_001270989.1 431966 D 557436 CDS YP_001270990.1 148543620 5189420 434054..436918 1 NC_009513.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase; excinuclease ABC subunit A 436918 5189420 Lreu_0384 Lactobacillus reuteri DSM 20016 excinuclease ABC subunit A YP_001270990.1 434054 D 557436 CDS YP_001270991.1 148543621 5189628 437157..438518 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 438518 5189628 Lreu_0385 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001270991.1 437157 D 557436 CDS YP_001270992.1 148543622 5189888 438605..439498 1 NC_009513.1 PFAM: uncharacterised P-loop ATPase protein UPF0042; hypothetical protein 439498 5189888 Lreu_0386 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270992.1 438605 D 557436 CDS YP_001270993.1 148543623 5190124 439514..440500 1 NC_009513.1 PFAM: CofD; CofD protein 440500 5190124 Lreu_0387 Lactobacillus reuteri DSM 20016 CofD protein YP_001270993.1 439514 D 557436 CDS YP_001270994.1 148543624 5190157 440519..441460 1 NC_009513.1 PFAM: protein of unknown function DUF199; hypothetical protein 441460 5190157 Lreu_0388 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001270994.1 440519 D 557436 CDS YP_001270995.1 148543625 5189710 442357..442950 1 NC_009513.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 442950 clpP 5189710 clpP Lactobacillus reuteri DSM 20016 ATP-dependent Clp protease proteolytic subunit YP_001270995.1 442357 D 557436 CDS YP_001270996.1 148543626 5189809 443355..444737 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 444737 5189809 Lreu_0390 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001270996.1 443355 D 557436 CDS YP_001270997.1 148543627 5189502 444855..446405 1 NC_009513.1 PFAM: TrkA-C domain protein; Chloride channel, core; chloride channel protein 446405 5189502 Lreu_0391 Lactobacillus reuteri DSM 20016 chloride channel protein YP_001270997.1 444855 D 557436 CDS YP_001270998.1 148543628 5189524 446472..446711 1 NC_009513.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG 446711 5189524 Lreu_0392 Lactobacillus reuteri DSM 20016 preprotein translocase subunit SecG YP_001270998.1 446472 D 557436 CDS YP_001270999.1 148543629 5190135 446790..447566 1 NC_009513.1 esterase/lipase-like protein 447566 5190135 Lreu_0393 Lactobacillus reuteri DSM 20016 esterase/lipase-like protein YP_001270999.1 446790 D 557436 CDS YP_001271000.1 148543630 5189490 447553..449958 1 NC_009513.1 TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B, OB region N-terminal domain; ribonuclease R 449958 5189490 Lreu_0394 Lactobacillus reuteri DSM 20016 ribonuclease R YP_001271000.1 447553 D 557436 CDS YP_001271001.1 148543631 5189485 449976..450449 1 NC_009513.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 450449 smpB 5189485 smpB Lactobacillus reuteri DSM 20016 SsrA-binding protein YP_001271001.1 449976 D 557436 CDS YP_001271002.1 148543632 5189416 complement(450506..451090) 1 NC_009513.1 hypothetical protein 451090 5189416 Lreu_0396 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271002.1 450506 R 557436 CDS YP_001271003.1 148543633 5189688 451241..451930 1 NC_009513.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 451930 5189688 Lreu_0397 Lactobacillus reuteri DSM 20016 uracil-DNA glycosylase YP_001271003.1 451241 D 557436 CDS YP_001271004.1 148543634 5189417 451991..452965 1 NC_009513.1 in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase 452965 eutD 5189417 eutD Lactobacillus reuteri DSM 20016 phosphotransacetylase YP_001271004.1 451991 D 557436 CDS YP_001271005.1 148543635 5189496 453085..453543 1 NC_009513.1 PFAM: protein of unknown function UPF0079; hypothetical protein 453543 5189496 Lreu_0399 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271005.1 453085 D 557436 CDS YP_001271006.1 148543636 5189017 453543..454052 1 NC_009513.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 454052 5189017 Lreu_0400 Lactobacillus reuteri DSM 20016 N-acetyltransferase GCN5 YP_001271006.1 453543 D 557436 CDS YP_001271007.1 148543637 5189884 complement(454085..454507) 1 NC_009513.1 hypothetical protein 454507 5189884 Lreu_0401 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271007.1 454085 R 557436 CDS YP_001271008.1 148543638 5189561 complement(454519..455058) 1 NC_009513.1 PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; exonuclease 455058 5189561 Lreu_0402 Lactobacillus reuteri DSM 20016 exonuclease YP_001271008.1 454519 R 557436 CDS YP_001271009.1 148543639 5189400 455183..456079 1 NC_009513.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 456079 murB 5189400 murB Lactobacillus reuteri DSM 20016 UDP-N-acetylenolpyruvoylglucosamine reductase YP_001271009.1 455183 D 557436 CDS YP_001271010.1 148543640 5188903 456412..457335 1 NC_009513.1 TIGRFAM: ribokinase; PFAM: PfkB domain protein; Phosphomethylpyrimidine kinase type-1; ribokinase 457335 5188903 Lreu_0404 Lactobacillus reuteri DSM 20016 ribokinase YP_001271010.1 456412 D 557436 CDS YP_001271011.1 148543641 5189868 457347..457742 1 NC_009513.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 457742 5189868 Lreu_0405 Lactobacillus reuteri DSM 20016 D-ribose pyranase YP_001271011.1 457347 D 557436 CDS YP_001271012.1 148543642 5188967 457761..459116 1 NC_009513.1 TIGRFAM: L-fucose transporter; PFAM: major facilitator superfamily MFS_1; L-fucose transporter 459116 5188967 Lreu_0406 Lactobacillus reuteri DSM 20016 L-fucose transporter YP_001271012.1 457761 D 557436 CDS YP_001271013.1 148543643 5189649 459276..460127 1 NC_009513.1 PFAM: protein of unknown function DUF147; hypothetical protein 460127 5189649 Lreu_0407 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271013.1 459276 D 557436 CDS YP_001271014.1 148543644 5189402 460111..461010 1 NC_009513.1 PFAM: YbbR family protein; hypothetical protein 461010 5189402 Lreu_0408 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271014.1 460111 D 557436 CDS YP_001271015.1 148543645 5189419 461038..462393 1 NC_009513.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 462393 glmM 5189419 glmM Lactobacillus reuteri DSM 20016 phosphoglucosamine mutase YP_001271015.1 461038 D 557436 CDS YP_001271016.1 148543646 5188772 462602..464422 1 NC_009513.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 464422 5188772 Lreu_0410 Lactobacillus reuteri DSM 20016 glucosamine--fructose-6-phosphate aminotransferase YP_001271016.1 462602 D 557436 CDS YP_001271017.1 148543647 5188945 464683..464994 1 NC_009513.1 hypothetical protein 464994 5188945 Lreu_0411 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271017.1 464683 D 557436 CDS YP_001271018.1 148543648 5189414 465056..466921 1 NC_009513.1 PFAM: acyltransferase 3; acyltransferase 3 466921 5189414 Lreu_0412 Lactobacillus reuteri DSM 20016 acyltransferase 3 YP_001271018.1 465056 D 557436 CDS YP_001271019.1 148543649 5189912 466932..467387 1 NC_009513.1 PFAM: regulatory protein, MarR; MarR family transcriptional regulator 467387 5189912 Lreu_0413 Lactobacillus reuteri DSM 20016 MarR family transcriptional regulator YP_001271019.1 466932 D 557436 CDS YP_001271020.1 148543650 5190168 467392..468198 1 NC_009513.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; cof family hydrolase 468198 5190168 Lreu_0414 Lactobacillus reuteri DSM 20016 cof family hydrolase YP_001271020.1 467392 D 557436 CDS YP_001271021.1 148543651 5188856 468521..469132 1 NC_009513.1 PFAM: Peptidoglycan-binding LysM; peptidoglycan-binding LysM 469132 5188856 Lreu_0415 Lactobacillus reuteri DSM 20016 peptidoglycan-binding LysM YP_001271021.1 468521 D 557436 CDS YP_001271022.1 148543652 5189002 469742..470461 1 NC_009513.1 PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 470461 5189002 Lreu_0416 Lactobacillus reuteri DSM 20016 two component transcriptional regulator YP_001271022.1 469742 D 557436 CDS YP_001271023.1 148543653 5189535 470461..471948 1 NC_009513.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase 471948 5189535 Lreu_0417 Lactobacillus reuteri DSM 20016 integral membrane sensor signal transduction histidine kinase YP_001271023.1 470461 D 557436 CDS YP_001271024.1 148543654 5190068 472117..472977 1 NC_009513.1 PFAM: sugar transport family protein; sugar transport family protein 472977 5190068 Lreu_0418 Lactobacillus reuteri DSM 20016 sugar transport family protein YP_001271024.1 472117 D 557436 CDS YP_001271025.1 148543655 5189770 complement(473052..473666) 1 NC_009513.1 PFAM: transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 473666 5189770 Lreu_0419 Lactobacillus reuteri DSM 20016 hexapaptide repeat-containing transferase YP_001271025.1 473052 R 557436 CDS YP_001271026.1 148543656 5189737 473847..475205 1 NC_009513.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 475205 pgi 5189737 pgi Lactobacillus reuteri DSM 20016 glucose-6-phosphate isomerase YP_001271026.1 473847 D 557436 CDS YP_001271027.1 148543657 5189354 complement(475692..475991) 1 NC_009513.1 hypothetical protein 475991 5189354 Lreu_0421 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271027.1 475692 R 557436 CDS YP_001271028.1 148543658 5189388 476129..476335 1 NC_009513.1 sugar (pentulose and hexulose) kinase-like protein 476335 5189388 Lreu_0422 Lactobacillus reuteri DSM 20016 sugar (pentulose and hexulose) kinase-like protein YP_001271028.1 476129 D 557436 CDS YP_001271029.1 148543659 5188754 complement(476481..476939) 1 NC_009513.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 476939 5188754 Lreu_0423 Lactobacillus reuteri DSM 20016 transposase IS200-family protein YP_001271029.1 476481 R 557436 CDS YP_001271030.1 148543660 5189403 complement(477160..477999) 1 NC_009513.1 PFAM: response regulator receiver; YcbB domain; response regulator receiver protein 477999 5189403 Lreu_0424 Lactobacillus reuteri DSM 20016 response regulator receiver protein YP_001271030.1 477160 R 557436 CDS YP_001271031.1 148543661 5188926 478252..479259 1 NC_009513.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 479259 5188926 Lreu_0425 Lactobacillus reuteri DSM 20016 ornithine carbamoyltransferase YP_001271031.1 478252 D 557436 CDS YP_001271032.1 148543662 5189431 479276..480208 1 NC_009513.1 catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 480208 5189431 Lreu_0426 Lactobacillus reuteri DSM 20016 carbamate kinase YP_001271032.1 479276 D 557436 CDS YP_001271033.1 148543663 5189357 complement(480252..481166) 1 NC_009513.1 PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 481166 5189357 Lreu_0427 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271033.1 480252 R 557436 CDS YP_001271034.1 148543664 5189362 complement(481250..481831) 1 NC_009513.1 PFAM: peptidase M10A and M12B, matrixin and adamalysin; peptidase M10A and M12B, matrixin and adamalysin 481831 5189362 Lreu_0428 Lactobacillus reuteri DSM 20016 peptidase M10A and M12B, matrixin and adamalysin YP_001271034.1 481250 R 557436 CDS YP_001271035.1 148543665 5189807 482107..482475 1 NC_009513.1 hypothetical protein 482475 5189807 Lreu_0429 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271035.1 482107 D 557436 CDS YP_001271036.1 148543666 5189871 482475..482762 1 NC_009513.1 hypothetical protein 482762 5189871 Lreu_0430 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271036.1 482475 D 557436 CDS YP_001271037.1 148543667 5189556 482762..484699 1 NC_009513.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase, type 3; copper-translocating P-type ATPase 484699 5189556 Lreu_0431 Lactobacillus reuteri DSM 20016 copper-translocating P-type ATPase YP_001271037.1 482762 D 557436 CDS YP_001271038.1 148543668 5189534 484818..485294 1 NC_009513.1 hypothetical protein 485294 5189534 Lreu_0432 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271038.1 484818 D 557436 CDS YP_001271039.1 148543669 5189473 485523..485852 1 NC_009513.1 hypothetical protein 485852 5189473 Lreu_0433 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271039.1 485523 D 557436 CDS YP_001271040.1 148543670 5189850 complement(488117..488326) 1 NC_009513.1 hypothetical protein 488326 5189850 Lreu_0435 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271040.1 488117 R 557436 CDS YP_001271041.1 148543671 5189384 complement(488749..489996) 1 NC_009513.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 489996 5189384 Lreu_0436 Lactobacillus reuteri DSM 20016 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001271041.1 488749 R 557436 CDS YP_001271042.1 148543672 5189433 complement(491172..491537) 1 NC_009513.1 hypothetical protein 491537 5189433 Lreu_0437 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271042.1 491172 R 557436 CDS YP_001271043.1 148543673 5188886 complement(492089..492490) 1 NC_009513.1 hypothetical protein 492490 5188886 Lreu_0438 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271043.1 492089 R 557436 CDS YP_001271044.1 148543674 5189449 complement(492957..493916) 1 NC_009513.1 hypothetical protein 493916 5189449 Lreu_0439 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271044.1 492957 R 557436 CDS YP_001271045.1 148543675 5189946 complement(494157..494627) 1 NC_009513.1 hypothetical protein 494627 5189946 Lreu_0440 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271045.1 494157 R 557436 CDS YP_001271046.1 148543676 5189607 complement(494784..495548) 1 NC_009513.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 495548 5189607 Lreu_0441 Lactobacillus reuteri DSM 20016 integrase catalytic subunit YP_001271046.1 494784 R 557436 CDS YP_001271047.1 148543677 5189482 complement(495545..496144) 1 NC_009513.1 hypothetical protein 496144 5189482 Lreu_0442 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271047.1 495545 R 557436 CDS YP_001271048.1 148543678 5188975 complement(496370..496963) 1 NC_009513.1 hypothetical protein 496963 5188975 Lreu_0443 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271048.1 496370 R 557436 CDS YP_001271049.1 148543679 5188990 497154..498173 1 NC_009513.1 PFAM: beta-lactamase; beta-lactamase 498173 5188990 Lreu_0444 Lactobacillus reuteri DSM 20016 beta-lactamase YP_001271049.1 497154 D 557436 CDS YP_001271050.1 148543680 5188997 498381..499613 1 NC_009513.1 catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase 499613 5188997 Lreu_0445 Lactobacillus reuteri DSM 20016 arginine deiminase YP_001271050.1 498381 D 557436 CDS YP_001271051.1 148543681 5189566 499724..500185 1 NC_009513.1 PFAM: arginine repressor; ArgR family transcriptional regulator 500185 5189566 Lreu_0446 Lactobacillus reuteri DSM 20016 ArgR family transcriptional regulator YP_001271051.1 499724 D 557436 CDS YP_001271052.1 148543682 5190050 500206..501627 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 501627 5190050 Lreu_0447 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001271052.1 500206 D 557436 CDS YP_001271053.1 148543683 5189993 501685..503082 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 503082 5189993 Lreu_0448 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001271053.1 501685 D 557436 CDS YP_001271054.1 148543684 5189839 complement(503465..504172) 1 NC_009513.1 PFAM: CobB/CobQ domain protein glutamine amidotransferase; glutamine amidotransferase 504172 5189839 Lreu_0449 Lactobacillus reuteri DSM 20016 glutamine amidotransferase YP_001271054.1 503465 R 557436 CDS YP_001271055.1 148543685 5189497 complement(504172..505509) 1 NC_009513.1 PFAM: Mur ligase, middle domain protein; domain of unknown function DUF1727; hypothetical protein 505509 5189497 Lreu_0450 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271055.1 504172 R 557436 CDS YP_001271056.1 148543686 5188855 505739..506314 1 NC_009513.1 PFAM: thymidine kinase; thymidine kinase 506314 5188855 Lreu_0451 Lactobacillus reuteri DSM 20016 thymidine kinase YP_001271056.1 505739 D 557436 CDS YP_001271057.1 148543687 5189415 506330..507418 1 NC_009513.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 507418 prfA 5189415 prfA Lactobacillus reuteri DSM 20016 peptide chain release factor 1 YP_001271057.1 506330 D 557436 CDS YP_001271058.1 148543688 5189512 507411..508277 1 NC_009513.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; HemK family modification methylase 508277 5189512 Lreu_0453 Lactobacillus reuteri DSM 20016 HemK family modification methylase YP_001271058.1 507411 D 557436 CDS YP_001271059.1 148543689 5189707 508283..509311 1 NC_009513.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC, N-terminal domain; translation factor SUA5 509311 5189707 Lreu_0454 Lactobacillus reuteri DSM 20016 translation factor SUA5 YP_001271059.1 508283 D 557436 CDS YP_001271060.1 148543690 5189900 509425..510660 1 NC_009513.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 510660 glyA 5189900 glyA Lactobacillus reuteri DSM 20016 serine hydroxymethyltransferase YP_001271060.1 509425 D 557436 CDS YP_001271061.1 148543691 5189304 510753..511388 1 NC_009513.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 511388 upp 5189304 upp Lactobacillus reuteri DSM 20016 uracil phosphoribosyltransferase YP_001271061.1 510753 D 557436 CDS YP_001271062.1 148543692 5189493 511519..513246 1 NC_009513.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein, mobile region; PEP-utilising protein domain protein; phosphoenolpyruvate--protein phosphotransferase 513246 5189493 Lreu_0457 Lactobacillus reuteri DSM 20016 phosphoenolpyruvate--protein phosphotransferase YP_001271062.1 511519 D 557436 CDS YP_001271063.1 148543693 5189631 513348..514463 1 NC_009513.1 PFAM: YibE/F family protein; hypothetical protein 514463 5189631 Lreu_0458 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271063.1 513348 D 557436 CDS YP_001271064.1 148543694 5189359 514460..515233 1 NC_009513.1 PFAM: YibE/F family protein; hypothetical protein 515233 5189359 Lreu_0459 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271064.1 514460 D 557436 CDS YP_001271065.1 148543695 5189619 515393..516664 1 NC_009513.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; uracil-xanthine permease 516664 5189619 Lreu_0460 Lactobacillus reuteri DSM 20016 uracil-xanthine permease YP_001271065.1 515393 D 557436 CDS YP_001271066.1 148543696 5189814 516979..517686 1 NC_009513.1 TIGRFAM: ATP synthase F0, A subunit; PFAM: H+-transporting two-sector ATPase, A subunit; ATP synthase F0 subunit A 517686 5189814 Lreu_0461 Lactobacillus reuteri DSM 20016 ATP synthase F0 subunit A YP_001271066.1 516979 D 557436 CDS YP_001271067.1 148543697 5188958 517711..517929 1 NC_009513.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+-transporting two-sector ATPase, C subunit; ATP synthase F0 subunit C 517929 5188958 Lreu_0462 Lactobacillus reuteri DSM 20016 ATP synthase F0 subunit C YP_001271067.1 517711 D 557436 CDS YP_001271068.1 148543698 5188932 517975..518493 1 NC_009513.1 TIGRFAM: ATP synthase F0, B subunit; PFAM: H+-transporting two-sector ATPase, B/B' subunit; ATP synthase F0 subunit B 518493 5188932 Lreu_0463 Lactobacillus reuteri DSM 20016 ATP synthase F0 subunit B YP_001271068.1 517975 D 557436 CDS YP_001271069.1 148543699 5189519 518483..519025 1 NC_009513.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 519025 5189519 Lreu_0464 Lactobacillus reuteri DSM 20016 F0F1 ATP synthase subunit delta YP_001271069.1 518483 D 557436 CDS YP_001271070.1 148543700 5188458 519057..520586 1 NC_009513.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 520586 5188458 Lreu_0465 Lactobacillus reuteri DSM 20016 F0F1 ATP synthase subunit alpha YP_001271070.1 519057 D 557436 CDS YP_001271071.1 148543701 5189228 520622..521566 1 NC_009513.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 521566 5189228 Lreu_0466 Lactobacillus reuteri DSM 20016 F0F1 ATP synthase subunit gamma YP_001271071.1 520622 D 557436 CDS YP_001271072.1 148543702 5188536 521593..523020 1 NC_009513.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 523020 5188536 Lreu_0467 Lactobacillus reuteri DSM 20016 F0F1 ATP synthase subunit beta YP_001271072.1 521593 D 557436 CDS YP_001271073.1 148543703 5188554 523032..523463 1 NC_009513.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 523463 atpC 5188554 atpC Lactobacillus reuteri DSM 20016 F0F1 ATP synthase subunit epsilon YP_001271073.1 523032 D 557436 CDS YP_001271074.1 148543704 5189514 523699..523929 1 NC_009513.1 TIGRFAM: conserved hypothetical integral membrane protein; PFAM: conserved hypothetical protein, integral membrane YwzB; hypothetical protein 523929 5189514 Lreu_0469 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271074.1 523699 D 557436 CDS YP_001271075.1 148543705 5188769 523948..525264 1 NC_009513.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); UDP-N-acetylglucosamine 1-carboxyvinyltransferase 525264 5188769 Lreu_0470 Lactobacillus reuteri DSM 20016 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001271075.1 523948 D 557436 CDS YP_001271076.1 148543706 5189722 525371..526363 1 NC_009513.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; rod shape-determining protein MreB 526363 5189722 Lreu_0471 Lactobacillus reuteri DSM 20016 rod shape-determining protein MreB YP_001271076.1 525371 D 557436 CDS YP_001271077.1 148543707 5189641 526369..526605 1 NC_009513.1 PFAM: protein of unknown function DUF37; hypothetical protein 526605 5189641 Lreu_0472 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271077.1 526369 D 557436 CDS YP_001271078.1 148543708 5189604 526629..526853 1 NC_009513.1 hypothetical protein 526853 5189604 Lreu_0473 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271078.1 526629 D 557436 CDS YP_001271079.1 148543709 5189661 526902..528095 1 NC_009513.1 PFAM: cell cycle protein; cell cycle protein 528095 5189661 Lreu_0474 Lactobacillus reuteri DSM 20016 cell cycle protein YP_001271079.1 526902 D 557436 CDS YP_001271080.1 148543710 5188774 528108..528401 1 NC_009513.1 PFAM: glycine cleavage H-protein; glycine cleavage H-protein 528401 5188774 Lreu_0475 Lactobacillus reuteri DSM 20016 glycine cleavage H-protein YP_001271080.1 528108 D 557436 CDS YP_001271081.1 148543711 5188764 528593..529975 1 NC_009513.1 hypothetical protein 529975 5188764 Lreu_0476 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271081.1 528593 D 557436 CDS YP_001271082.1 148543712 5188977 530114..531250 1 NC_009513.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 531250 ddl 5188977 ddl Lactobacillus reuteri DSM 20016 D-alanyl-alanine synthetase A YP_001271082.1 530114 D 557436 CDS YP_001271083.1 148543713 5189023 531685..532530 1 NC_009513.1 PFAM: helix-turn-helix domain protein; SMART: Tetratricopeptide domain protein; helix-turn-helix domain-containing protein 532530 5189023 Lreu_0478 Lactobacillus reuteri DSM 20016 helix-turn-helix domain-containing protein YP_001271083.1 531685 D 557436 CDS YP_001271084.1 148543714 5190005 532927..534342 1 NC_009513.1 TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; sugar transporter 534342 5190005 Lreu_0479 Lactobacillus reuteri DSM 20016 sugar transporter YP_001271084.1 532927 D 557436 CDS YP_001271085.1 148543715 5190036 534355..535977 1 NC_009513.1 PFAM: carbohydrate kinase, FGGY; carbohydrate kinase FGGY 535977 5190036 Lreu_0480 Lactobacillus reuteri DSM 20016 carbohydrate kinase FGGY YP_001271085.1 534355 D 557436 CDS YP_001271086.1 148543716 5189833 535981..536709 1 NC_009513.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 536709 araD 5189833 araD Lactobacillus reuteri DSM 20016 L-ribulose-5-phosphate 4-epimerase YP_001271086.1 535981 D 557436 CDS YP_001271087.1 148543717 5189863 536763..538184 1 NC_009513.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase 538184 5189863 Lreu_0482 Lactobacillus reuteri DSM 20016 L-arabinose isomerase YP_001271087.1 536763 D 557436 CDS YP_001271088.1 148543718 5189458 538270..538839 1 NC_009513.1 PFAM: transferase hexapeptide repeat containing protein; maltose O-acetyltransferase 538839 5189458 Lreu_0483 Lactobacillus reuteri DSM 20016 maltose O-acetyltransferase YP_001271088.1 538270 D 557436 CDS YP_001271089.1 148543719 5190096 complement(538928..539770) 1 NC_009513.1 PFAM: aldo/keto reductase; aldo/keto reductase 539770 5190096 Lreu_0484 Lactobacillus reuteri DSM 20016 aldo/keto reductase YP_001271089.1 538928 R 557436 CDS YP_001271090.1 148543720 5188830 complement(539763..540860) 1 NC_009513.1 PFAM: regulatory protein GntR, HTH; periplasmic binding protein/LacI transcriptional regulator; GntR family transcriptional regulator 540860 5188830 Lreu_0485 Lactobacillus reuteri DSM 20016 GntR family transcriptional regulator YP_001271090.1 539763 R 557436 CDS YP_001271091.1 148543721 5188915 complement(540972..541460) 1 NC_009513.1 PFAM: UspA domain protein; UspA domain-containing protein 541460 5188915 Lreu_0486 Lactobacillus reuteri DSM 20016 UspA domain-containing protein YP_001271091.1 540972 R 557436 CDS YP_001271092.1 148543722 5189591 complement(541544..541840) 1 NC_009513.1 hypothetical protein 541840 5189591 Lreu_0487 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271092.1 541544 R 557436 CDS YP_001271093.1 148543723 5189948 complement(542146..543450) 1 NC_009513.1 PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; recombination factor protein RarA 543450 5189948 Lreu_0488 Lactobacillus reuteri DSM 20016 recombination factor protein RarA YP_001271093.1 542146 R 557436 CDS YP_001271094.1 148543724 5189466 complement(543454..543942) 1 NC_009513.1 PFAM: protein of unknown function DUF1694; hypothetical protein 543942 5189466 Lreu_0489 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271094.1 543454 R 557436 CDS YP_001271095.1 148543725 5188816 544068..544349 1 NC_009513.1 hypothetical protein 544349 5188816 Lreu_0490 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271095.1 544068 D 557436 CDS YP_001271096.1 148543726 5189505 complement(544407..544814) 1 NC_009513.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 544814 5189505 Lreu_0491 Lactobacillus reuteri DSM 20016 glyoxalase/bleomycin resistance protein/dioxygenase YP_001271096.1 544407 R 557436 CDS YP_001271097.1 148543727 5188787 complement(544839..545582) 1 NC_009513.1 hypothetical protein 545582 5188787 Lreu_0492 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271097.1 544839 R 557436 CDS YP_001271098.1 148543728 5188736 545835..546584 1 NC_009513.1 PFAM: protein of unknown function DUF328; hypothetical protein 546584 5188736 Lreu_0493 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271098.1 545835 D 557436 CDS YP_001271099.1 148543729 5189001 546700..548430 1 NC_009513.1 catalyzes the formation of formyl-CoA from oxalyl-CoA; oxalyl-CoA decarboxylase 548430 5189001 Lreu_0494 Lactobacillus reuteri DSM 20016 oxalyl-CoA decarboxylase YP_001271099.1 546700 D 557436 CDS YP_001271100.1 148543730 5188955 548423..549277 1 NC_009513.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 549277 5188955 Lreu_0495 Lactobacillus reuteri DSM 20016 L-carnitine dehydratase/bile acid-inducible protein F YP_001271100.1 548423 D 557436 CDS YP_001271101.1 148543731 5190165 549420..549878 1 NC_009513.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 549878 5190165 Lreu_0496 Lactobacillus reuteri DSM 20016 transposase IS200-family protein YP_001271101.1 549420 D 557436 CDS YP_001271102.1 148543732 5189897 550020..550523 1 NC_009513.1 acyl-CoA transferase/carnitine dehydratase-like protein 550523 5189897 Lreu_0497 Lactobacillus reuteri DSM 20016 acyl-CoA transferase/carnitine dehydratase-like protein YP_001271102.1 550020 D 557436 CDS YP_001271103.1 148543733 5189437 551030..552412 1 NC_009513.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 552412 5189437 Lreu_0498 Lactobacillus reuteri DSM 20016 RNA-directed DNA polymerase YP_001271103.1 551030 D 557436 CDS YP_001271104.1 148543734 5189418 552661..553995 1 NC_009513.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; xanthine/uracil/vitamin C permease 553995 5189418 Lreu_0499 Lactobacillus reuteri DSM 20016 xanthine/uracil/vitamin C permease YP_001271104.1 552661 D 557436 CDS YP_001271105.1 148543735 5189779 complement(554127..554732) 1 NC_009513.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 554732 rpsD 5189779 rpsD Lactobacillus reuteri DSM 20016 30S ribosomal protein S4 YP_001271105.1 554127 R 557436 CDS YP_001271106.1 148543736 5188846 555123..556826 1 NC_009513.1 acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation; septation ring formation regulator EzrA 556826 5188846 Lreu_0501 Lactobacillus reuteri DSM 20016 septation ring formation regulator EzrA YP_001271106.1 555123 D 557436 CDS YP_001271107.1 148543737 5189559 557050..558198 1 NC_009513.1 PFAM: aminotransferase, class V; class V aminotransferase 558198 5189559 Lreu_0502 Lactobacillus reuteri DSM 20016 class V aminotransferase YP_001271107.1 557050 D 557436 CDS YP_001271108.1 148543738 5188954 558220..559440 1 NC_009513.1 Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 559440 5188954 Lreu_0503 Lactobacillus reuteri DSM 20016 thiamine biosynthesis protein ThiI YP_001271108.1 558220 D 557436 CDS YP_001271109.1 148543739 5189693 559767..562421 1 NC_009513.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 562421 valS 5189693 valS Lactobacillus reuteri DSM 20016 valyl-tRNA synthetase YP_001271109.1 559767 D 557436 CDS YP_001271110.1 148543740 5188845 562804..564222 1 NC_009513.1 PFAM: cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I 564222 5188845 Lreu_0505 Lactobacillus reuteri DSM 20016 cytochrome bd ubiquinol oxidase subunit I YP_001271110.1 562804 D 557436 CDS YP_001271111.1 148543741 5189768 564223..565239 1 NC_009513.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II 565239 5189768 Lreu_0506 Lactobacillus reuteri DSM 20016 cytochrome d ubiquinol oxidase subunit II YP_001271111.1 564223 D 557436 CDS YP_001271112.1 148543742 5189227 565291..566976 1 NC_009513.1 TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; SMART: AAA ATPase; cysteine ABC transporter permease/ATP-binding protein 566976 5189227 Lreu_0507 Lactobacillus reuteri DSM 20016 cysteine ABC transporter permease/ATP-binding protein YP_001271112.1 565291 D 557436 CDS YP_001271113.1 148543743 5188756 566969..568714 1 NC_009513.1 TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase; cysteine ABC transporter permease/ATP-binding protein 568714 5188756 Lreu_0508 Lactobacillus reuteri DSM 20016 cysteine ABC transporter permease/ATP-binding protein YP_001271113.1 566969 D 557436 CDS YP_001271114.1 148543744 5188844 568769..569983 1 NC_009513.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 569983 5188844 Lreu_0509 Lactobacillus reuteri DSM 20016 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001271114.1 568769 D 557436 CDS YP_001271115.1 148543745 5189540 570086..571399 1 NC_009513.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 571399 5189540 Lreu_0510 Lactobacillus reuteri DSM 20016 bifunctional folylpolyglutamate synthase/dihydrofolate synthase YP_001271115.1 570086 D 557436 CDS YP_001271116.1 148543746 5189741 571466..572098 1 NC_009513.1 PFAM: DNA repair protein RadC; DNA repair protein RadC 572098 5189741 Lreu_0511 Lactobacillus reuteri DSM 20016 DNA repair protein RadC YP_001271116.1 571466 D 557436 CDS YP_001271117.1 148543747 5189683 572234..573235 1 NC_009513.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 573235 5189683 Lreu_0512 Lactobacillus reuteri DSM 20016 rod shape-determining protein MreB YP_001271117.1 572234 D 557436 CDS YP_001271118.1 148543748 5188950 573369..574226 1 NC_009513.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 574226 5188950 Lreu_0513 Lactobacillus reuteri DSM 20016 rod shape-determining protein MreC YP_001271118.1 573369 D 557436 CDS YP_001271119.1 148543749 5188951 574233..574769 1 NC_009513.1 rod shape-determining protein MreD 574769 5188951 Lreu_0514 Lactobacillus reuteri DSM 20016 rod shape-determining protein MreD YP_001271119.1 574233 D 557436 CDS YP_001271120.1 148543750 5189015 575238..575885 1 NC_009513.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane protein 575885 5189015 Lreu_0515 Lactobacillus reuteri DSM 20016 polar amino acid ABC transporter inner membrane protein YP_001271120.1 575238 D 557436 CDS YP_001271121.1 148543751 5188738 575900..576550 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 576550 5188738 Lreu_0516 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001271121.1 575900 D 557436 CDS YP_001271122.1 148543752 5188947 576568..577419 1 NC_009513.1 PFAM: extracellular solute-binding protein, family 3; extracellular solute-binding protein 577419 5188947 Lreu_0517 Lactobacillus reuteri DSM 20016 extracellular solute-binding protein YP_001271122.1 576568 D 557436 CDS YP_001271123.1 148543753 5189548 577623..578870 1 NC_009513.1 PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein 578870 5189548 Lreu_0518 Lactobacillus reuteri DSM 20016 peptidase M16 domain-containing protein YP_001271123.1 577623 D 557436 CDS YP_001271124.1 148543754 5188849 578875..580173 1 NC_009513.1 PFAM: peptidase M16 domain protein; peptidase M16 domain-containing protein 580173 5188849 Lreu_0519 Lactobacillus reuteri DSM 20016 peptidase M16 domain-containing protein YP_001271124.1 578875 D 557436 CDS YP_001271125.1 148543755 5189257 580272..581309 1 NC_009513.1 hypothetical protein 581309 5189257 Lreu_0520 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271125.1 580272 D 557436 CDS YP_001271126.1 148543756 5188759 581337..581924 1 NC_009513.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 581924 5188759 Lreu_0521 Lactobacillus reuteri DSM 20016 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001271126.1 581337 D 557436 CDS YP_001271127.1 148543757 5188755 582049..583296 1 NC_009513.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; competence/damage-inducible protein CinA 583296 5188755 Lreu_0522 Lactobacillus reuteri DSM 20016 competence/damage-inducible protein CinA YP_001271127.1 582049 D 557436 CDS YP_001271128.1 148543758 5189467 583386..584474 1 NC_009513.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 584474 recA 5189467 recA Lactobacillus reuteri DSM 20016 recombinase A YP_001271128.1 583386 D 557436 CDS YP_001271129.1 148543759 5188897 584710..586251 1 NC_009513.1 TIGRFAM: metal dependent phophohydrolase; PFAM: KH, type 1, domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KH domain protein; metal dependent phosphohydrolase 586251 5188897 Lreu_0524 Lactobacillus reuteri DSM 20016 metal dependent phosphohydrolase YP_001271129.1 584710 D 557436 CDS YP_001271130.1 148543760 5190102 586413..589058 1 NC_009513.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 589058 5190102 Lreu_0525 Lactobacillus reuteri DSM 20016 DNA mismatch repair protein MutS YP_001271130.1 586413 D 557436 CDS YP_001271131.1 148543761 5188393 589070..591076 1 NC_009513.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 591076 mutL 5188393 mutL Lactobacillus reuteri DSM 20016 DNA mismatch repair protein YP_001271131.1 589070 D 557436 CDS YP_001271132.1 148543762 5188879 591089..591688 1 NC_009513.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 591688 ruvA 5188879 ruvA Lactobacillus reuteri DSM 20016 Holliday junction DNA helicase RuvA YP_001271132.1 591089 D 557436 CDS YP_001271133.1 148543763 5189906 591703..592719 1 NC_009513.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 592719 ruvB 5189906 ruvB Lactobacillus reuteri DSM 20016 Holliday junction DNA helicase RuvB YP_001271133.1 591703 D 557436 CDS YP_001271134.1 148543764 5188540 592732..593820 1 NC_009513.1 TIGRFAM: tRNA-guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase; tRNA-guanine transglycosylase 593820 5188540 Lreu_0529 Lactobacillus reuteri DSM 20016 tRNA-guanine transglycosylase YP_001271134.1 592732 D 557436 CDS YP_001271135.1 148543765 5189654 593892..594356 1 NC_009513.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; protein translocase subunit yajC 594356 5189654 Lreu_0530 Lactobacillus reuteri DSM 20016 protein translocase subunit yajC YP_001271135.1 593892 D 557436 CDS YP_001271136.1 148543766 5188741 594483..595442 1 NC_009513.1 PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; phosphoesterase domain-containing protein 595442 5188741 Lreu_0531 Lactobacillus reuteri DSM 20016 phosphoesterase domain-containing protein YP_001271136.1 594483 D 557436 CDS YP_001271137.1 148543767 5190152 595456..596829 1 NC_009513.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase 596829 5190152 Lreu_0532 Lactobacillus reuteri DSM 20016 DEAD/DEAH box helicase YP_001271137.1 595456 D 557436 CDS YP_001271138.1 148543768 5188742 597088..599742 1 NC_009513.1 TIGRFAM: alanyl-tRNA synthetase; PFAM: alanyl-tRNA synthetase, class IIc; phosphoesterase, DHHA1; Threonyl/alanyl tRNA synthetase, SAD; alanyl-tRNA synthetase 599742 5188742 Lreu_0533 Lactobacillus reuteri DSM 20016 alanyl-tRNA synthetase YP_001271138.1 597088 D 557436 CDS YP_001271139.1 148543769 5188468 600012..600278 1 NC_009513.1 PFAM: protein of unknown function DUF965; hypothetical protein 600278 5188468 Lreu_0534 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271139.1 600012 D 557436 CDS YP_001271140.1 148543770 5189189 600275..600718 1 NC_009513.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 600718 5189189 Lreu_0535 Lactobacillus reuteri DSM 20016 Holliday junction resolvase-like protein YP_001271140.1 600275 D 557436 CDS YP_001271141.1 148543771 5188734 600728..601024 1 NC_009513.1 PFAM: protein of unknown function DUF1292; hypothetical protein 601024 5188734 Lreu_0536 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271141.1 600728 D 557436 CDS YP_001271142.1 148543772 5189861 601123..601659 1 NC_009513.1 PFAM: Colicin V production protein; colicin V production protein 601659 5189861 Lreu_0537 Lactobacillus reuteri DSM 20016 colicin V production protein YP_001271142.1 601123 D 557436 CDS YP_001271143.1 148543773 5189468 601661..604036 1 NC_009513.1 TIGRFAM: MutS2 family protein; PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein; MutS2 family protein 604036 5189468 Lreu_0538 Lactobacillus reuteri DSM 20016 MutS2 family protein YP_001271143.1 601661 D 557436 CDS YP_001271144.1 148543774 5188177 604127..604441 1 NC_009513.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; thioredoxin 604441 5188177 Lreu_0539 Lactobacillus reuteri DSM 20016 thioredoxin YP_001271144.1 604127 D 557436 CDS YP_001271145.1 148543775 5188522 complement(604496..605050) 1 NC_009513.1 hypothetical protein 605050 5188522 Lreu_0540 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271145.1 604496 R 557436 CDS YP_001271146.1 148543776 5188459 605205..606008 1 NC_009513.1 TIGRFAM: glutamate racemase; PFAM: Asp/Glu racemase; glutamate racemase 606008 5188459 Lreu_0541 Lactobacillus reuteri DSM 20016 glutamate racemase YP_001271146.1 605205 D 557436 CDS YP_001271147.1 148543777 5188347 606010..606597 1 NC_009513.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 606597 5188347 Lreu_0542 Lactobacillus reuteri DSM 20016 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase YP_001271147.1 606010 D 557436 CDS YP_001271148.1 148543778 5188541 606603..607121 1 NC_009513.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; phosphodiesterase 607121 5188541 Lreu_0543 Lactobacillus reuteri DSM 20016 phosphodiesterase YP_001271148.1 606603 D 557436 CDS YP_001271149.1 148543779 5188274 607142..607585 1 NC_009513.1 PFAM: CBS domain containing protein; hypothetical protein 607585 5188274 Lreu_0544 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271149.1 607142 D 557436 CDS YP_001271150.1 148543780 5188384 complement(607691..608527) 1 NC_009513.1 PFAM: sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; hydrolase 608527 5188384 Lreu_0545 Lactobacillus reuteri DSM 20016 hydrolase YP_001271150.1 607691 R 557436 CDS YP_001271151.1 148543781 5189594 complement(608517..609392) 1 NC_009513.1 PFAM: MscS Mechanosensitive ion channel; mechanosensitive ion channel protein MscS 609392 5189594 Lreu_0546 Lactobacillus reuteri DSM 20016 mechanosensitive ion channel protein MscS YP_001271151.1 608517 R 557436 CDS YP_001271152.1 148543782 5188552 609535..609975 1 NC_009513.1 PFAM: protein of unknown function DUF948; hypothetical protein 609975 5188552 Lreu_0547 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271152.1 609535 D 557436 CDS YP_001271153.1 148543783 5189092 609968..610426 1 NC_009513.1 hypothetical protein 610426 5189092 Lreu_0548 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271153.1 609968 D 557436 CDS YP_001271154.1 148543784 5188569 complement(610467..611576) 1 NC_009513.1 PFAM: creatinase; peptidase M24; peptidase M24 611576 5188569 Lreu_0549 Lactobacillus reuteri DSM 20016 peptidase M24 YP_001271154.1 610467 R 557436 CDS YP_001271155.1 148543785 5188638 611728..612738 1 NC_009513.1 TIGRFAM: catabolite control protein A; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 612738 5188638 Lreu_0550 Lactobacillus reuteri DSM 20016 LacI family transcriptional regulator YP_001271155.1 611728 D 557436 CDS YP_001271156.1 148543786 5188500 612752..613597 1 NC_009513.1 hypothetical protein 613597 5188500 Lreu_0551 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271156.1 612752 D 557436 CDS YP_001271157.1 148543787 5188699 613672..614418 1 NC_009513.1 PFAM: protein of unknown function DUF28; hypothetical protein 614418 5188699 Lreu_0552 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271157.1 613672 D 557436 CDS YP_001271158.1 148543788 5188976 614539..615516 1 NC_009513.1 PFAM: type II secretion system protein E; SMART: AAA ATPase; type II secretion system protein E 615516 5188976 Lreu_0553 Lactobacillus reuteri DSM 20016 type II secretion system protein E YP_001271158.1 614539 D 557436 CDS YP_001271159.1 148543789 5188857 615470..616504 1 NC_009513.1 PFAM: type II secretion system protein; type II secretion system protein 616504 5188857 Lreu_0554 Lactobacillus reuteri DSM 20016 type II secretion system protein YP_001271159.1 615470 D 557436 CDS YP_001271160.1 148543790 5189745 616504..616815 1 NC_009513.1 competence protein ComGC-like protein 616815 5189745 Lreu_0555 Lactobacillus reuteri DSM 20016 competence protein ComGC-like protein YP_001271160.1 616504 D 557436 CDS YP_001271161.1 148543791 5188993 616812..617246 1 NC_009513.1 hypothetical protein 617246 5188993 Lreu_0556 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271161.1 616812 D 557436 CDS YP_001271162.1 148543792 5190169 617233..617523 1 NC_009513.1 hypothetical protein 617523 5190169 Lreu_0557 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271162.1 617233 D 557436 CDS YP_001271163.1 148543793 5189874 617520..617951 1 NC_009513.1 hypothetical protein 617951 5189874 Lreu_0558 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271163.1 617520 D 557436 CDS YP_001271164.1 148543794 5189721 618366..619199 1 NC_009513.1 adenine-specific DNA methylase-like protein 619199 5189721 Lreu_0559 Lactobacillus reuteri DSM 20016 adenine-specific DNA methylase-like protein YP_001271164.1 618366 D 557436 CDS YP_001271165.1 148543795 5189605 619213..620409 1 NC_009513.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; acetate kinase 620409 5189605 Lreu_0560 Lactobacillus reuteri DSM 20016 acetate kinase YP_001271165.1 619213 D 557436 CDS YP_001271166.1 148543796 5189525 620524..621132 1 NC_009513.1 phosphoesterase or phosphohydrolase-like protein 621132 5189525 Lreu_0561 Lactobacillus reuteri DSM 20016 phosphoesterase or phosphohydrolase-like protein YP_001271166.1 620524 D 557436 CDS YP_001271167.1 148543797 5188725 621153..621698 1 NC_009513.1 PFAM: protein of unknown function DUF1027; hypothetical protein 621698 5188725 Lreu_0562 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271167.1 621153 D 557436 CDS YP_001271168.1 148543798 5189936 621707..622477 1 NC_009513.1 TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase 622477 5189936 Lreu_0563 Lactobacillus reuteri DSM 20016 HAD family hydrolase YP_001271168.1 621707 D 557436 CDS YP_001271169.1 148543799 5189940 622461..623114 1 NC_009513.1 TIGRFAM: integral membrane protein TIGR01906; PFAM: Integral membrane protein 1906; hypothetical protein 623114 5189940 Lreu_0564 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271169.1 622461 D 557436 CDS YP_001271170.1 148543800 5189390 complement(623082..623729) 1 NC_009513.1 PFAM: SNARE associated Golgi protein; hypothetical protein 623729 5189390 Lreu_0565 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271170.1 623082 R 557436 CDS YP_001271171.1 148543801 5189781 complement(631363..631854) 1 NC_009513.1 hypothetical protein 631854 5189781 Lreu_0566 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271171.1 631363 R 557436 CDS YP_001271172.1 148543802 5189828 632102..632503 1 NC_009513.1 PFAM: arsenate reductase and related; arsenate reductase-like protein 632503 5189828 Lreu_0567 Lactobacillus reuteri DSM 20016 arsenate reductase-like protein YP_001271172.1 632102 D 557436 CDS YP_001271173.1 148543803 5188792 632629..633300 1 NC_009513.1 enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence; adaptor protein 633300 5188792 Lreu_0568 Lactobacillus reuteri DSM 20016 adaptor protein YP_001271173.1 632629 D 557436 CDS YP_001271174.1 148543804 5189824 633384..634418 1 NC_009513.1 PFAM: Competence CoiA family protein; competence CoiA family protein 634418 5189824 Lreu_0569 Lactobacillus reuteri DSM 20016 competence CoiA family protein YP_001271174.1 633384 D 557436 CDS YP_001271175.1 148543805 5189555 634420..635796 1 NC_009513.1 PFAM: peptidase U34, dipeptidase; peptidase U34, dipeptidase 635796 5189555 Lreu_0570 Lactobacillus reuteri DSM 20016 peptidase U34, dipeptidase YP_001271175.1 634420 D 557436 CDS YP_001271176.1 148543806 5188964 complement(635868..636506) 1 NC_009513.1 hypothetical protein 636506 5188964 Lreu_0571 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271176.1 635868 R 557436 CDS YP_001271177.1 148543807 5189596 636671..637324 1 NC_009513.1 PFAM: RelA/SpoT domain protein; RelA/SpoT domain-containing protein 637324 5189596 Lreu_0572 Lactobacillus reuteri DSM 20016 RelA/SpoT domain-containing protein YP_001271177.1 636671 D 557436 CDS YP_001271178.1 148543808 5189908 637328..638140 1 NC_009513.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 638140 ppnK 5189908 ppnK Lactobacillus reuteri DSM 20016 inorganic polyphosphate/ATP-NAD kinase YP_001271178.1 637328 D 557436 CDS YP_001271179.1 148543809 5189218 638140..639045 1 NC_009513.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RluA family pseudouridine synthase 639045 5189218 Lreu_0574 Lactobacillus reuteri DSM 20016 RluA family pseudouridine synthase YP_001271179.1 638140 D 557436 CDS YP_001271180.1 148543810 5189579 complement(646444..646800) 1 NC_009513.1 PFAM: IS66 Orf2 family protein; IS66 Orf2 family protein 646800 5189579 Lreu_0576 Lactobacillus reuteri DSM 20016 IS66 Orf2 family protein YP_001271180.1 646444 R 557436 CDS YP_001271181.1 148543811 5188660 complement(646790..646978) 1 NC_009513.1 hypothetical protein 646978 5188660 Lreu_0577 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271181.1 646790 R 557436 CDS YP_001271182.1 148543812 5190103 complement(647399..648427) 1 NC_009513.1 6-phosphogluconolactonase 648427 5190103 Lreu_0578 Lactobacillus reuteri DSM 20016 6-phosphogluconolactonase YP_001271182.1 647399 R 557436 CDS YP_001271183.1 148543813 5189687 648542..649399 1 NC_009513.1 PFAM: Methyltransferase type 11; type 11 methyltransferase 649399 5189687 Lreu_0579 Lactobacillus reuteri DSM 20016 type 11 methyltransferase YP_001271183.1 648542 D 557436 CDS YP_001271184.1 148543814 5189773 649571..650080 1 NC_009513.1 TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA methyltransferase 650080 5189773 Lreu_0580 Lactobacillus reuteri DSM 20016 RNA methyltransferase YP_001271184.1 649571 D 557436 CDS YP_001271185.1 148543815 5188863 650102..652432 1 NC_009513.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; cell division protein FtsK 652432 5188863 Lreu_0581 Lactobacillus reuteri DSM 20016 cell division protein FtsK YP_001271185.1 650102 D 557436 CDS YP_001271186.1 148543816 5188962 complement(652494..652640) 1 NC_009513.1 hypothetical protein 652640 5188962 Lreu_0582 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271186.1 652494 R 557436 CDS YP_001271187.1 148543817 5189500 652715..653095 1 NC_009513.1 hypothetical protein 653095 5189500 Lreu_0583 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271187.1 652715 D 557436 CDS YP_001271188.1 148543818 5189539 653384..653812 1 NC_009513.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 653812 5189539 Lreu_0584 Lactobacillus reuteri DSM 20016 cell division protein MraZ YP_001271188.1 653384 D 557436 CDS YP_001271189.1 148543819 5188800 653828..654784 1 NC_009513.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; S-adenosyl-methyltransferase MraW 654784 mraW 5188800 mraW Lactobacillus reuteri DSM 20016 S-adenosyl-methyltransferase MraW YP_001271189.1 653828 D 557436 CDS YP_001271190.1 148543820 5189819 654792..655163 1 NC_009513.1 TIGRFAM: cell division protein FtsL; PFAM: Septum formation initiator; cell division protein FtsL 655163 5189819 Lreu_0586 Lactobacillus reuteri DSM 20016 cell division protein FtsL YP_001271190.1 654792 D 557436 CDS YP_001271191.1 148543821 5189422 655163..657322 1 NC_009513.1 PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PASTA domain containing protein; peptidoglycan glycosyltransferase 657322 5189422 Lreu_0587 Lactobacillus reuteri DSM 20016 peptidoglycan glycosyltransferase YP_001271191.1 655163 D 557436 CDS YP_001271192.1 148543822 5189950 657347..658318 1 NC_009513.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 658318 mraY 5189950 mraY Lactobacillus reuteri DSM 20016 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001271192.1 657347 D 557436 CDS YP_001271193.1 148543823 5189943 658331..659701 1 NC_009513.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 659701 murD 5189943 murD Lactobacillus reuteri DSM 20016 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_001271193.1 658331 D 557436 CDS YP_001271194.1 148543824 5188531 659703..660815 1 NC_009513.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 660815 murG 5188531 murG Lactobacillus reuteri DSM 20016 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_001271194.1 659703 D 557436 CDS YP_001271195.1 148543825 5189518 660843..661691 1 NC_009513.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein, FtsQ-type; cell division protein FtsQ 661691 5189518 Lreu_0591 Lactobacillus reuteri DSM 20016 cell division protein FtsQ YP_001271195.1 660843 D 557436 CDS YP_001271196.1 148543826 5190158 661812..663185 1 NC_009513.1 PFAM: cell division protein FtsA; cell division protein FtsA 663185 5190158 Lreu_0592 Lactobacillus reuteri DSM 20016 cell division protein FtsA YP_001271196.1 661812 D 557436 CDS YP_001271197.1 148543827 5189582 663203..664450 1 NC_009513.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase; Tubulin/FtsZ domain protein; cell division protein FtsZ 664450 5189582 Lreu_0593 Lactobacillus reuteri DSM 20016 cell division protein FtsZ YP_001271197.1 663203 D 557436 CDS YP_001271198.1 148543828 5190045 664520..664936 1 NC_009513.1 PFAM: protein of unknown function DUF552; hypothetical protein 664936 5190045 Lreu_0594 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271198.1 664520 D 557436 CDS YP_001271199.1 148543829 5189887 664955..665215 1 NC_009513.1 PFAM: hypothetical protein; hypothetical protein 665215 5189887 Lreu_0595 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271199.1 664955 D 557436 CDS YP_001271200.1 148543830 5189538 665238..666023 1 NC_009513.1 PFAM: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 666023 5189538 Lreu_0596 Lactobacillus reuteri DSM 20016 RNA-binding S4 domain-containing protein YP_001271200.1 665238 D 557436 CDS YP_001271201.1 148543831 5189014 666045..666785 1 NC_009513.1 PFAM: DivIVA family protein; DivIVA family protein 666785 5189014 Lreu_0597 Lactobacillus reuteri DSM 20016 DivIVA family protein YP_001271201.1 666045 D 557436 CDS YP_001271202.1 148543832 5189657 666996..669878 1 NC_009513.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 669878 ileS 5189657 ileS Lactobacillus reuteri DSM 20016 isoleucyl-tRNA synthetase YP_001271202.1 666996 D 557436 CDS YP_001271203.1 148543833 5189764 669991..670194 1 NC_009513.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding protein family protein 670194 5189764 Lreu_0599 Lactobacillus reuteri DSM 20016 cold-shock DNA-binding protein family protein YP_001271203.1 669991 D 557436 CDS YP_001271204.1 148543834 5189926 670207..670758 1 NC_009513.1 PFAM: NUDIX hydrolase; NUDIX hydrolase 670758 5189926 Lreu_0600 Lactobacillus reuteri DSM 20016 NUDIX hydrolase YP_001271204.1 670207 D 557436 CDS YP_001271205.1 148543835 5188887 670751..671020 1 NC_009513.1 hypothetical protein 671020 5188887 Lreu_0601 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271205.1 670751 D 557436 CDS YP_001271206.1 148543836 5189367 671036..671731 1 NC_009513.1 PFAM: purine or other phosphorylase, family 1; methylthioadenosine nucleosidase 671731 5189367 Lreu_0602 Lactobacillus reuteri DSM 20016 methylthioadenosine nucleosidase YP_001271206.1 671036 D 557436 CDS YP_001271207.1 148543837 5189648 671751..672905 1 NC_009513.1 PFAM: aminotransferase, class V; class V aminotransferase 672905 5189648 Lreu_0603 Lactobacillus reuteri DSM 20016 class V aminotransferase YP_001271207.1 671751 D 557436 CDS YP_001271208.1 148543838 5189308 672907..673245 1 NC_009513.1 hypothetical protein 673245 5189308 Lreu_0604 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271208.1 672907 D 557436 CDS YP_001271209.1 148543839 5189784 673353..674486 1 NC_009513.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 674486 mnmA 5189784 mnmA Lactobacillus reuteri DSM 20016 tRNA-specific 2-thiouridylase MnmA YP_001271209.1 673353 D 557436 CDS YP_001271210.1 148543840 5189803 674623..675279 1 NC_009513.1 PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 675279 5189803 Lreu_0606 Lactobacillus reuteri DSM 20016 phosphoglycerate mutase YP_001271210.1 674623 D 557436 CDS YP_001271211.1 148543841 5188984 675292..675975 1 NC_009513.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; hypothetical protein 675975 5188984 Lreu_0607 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271211.1 675292 D 557436 CDS YP_001271212.1 148543842 5189213 675997..678474 1 NC_009513.1 TIGRFAM: helicase, RecD/TraA family; SMART: AAA ATPase; ATP-dependent RecD/TraA family DNA helicase 678474 5189213 Lreu_0608 Lactobacillus reuteri DSM 20016 ATP-dependent RecD/TraA family DNA helicase YP_001271212.1 675997 D 557436 CDS YP_001271213.1 148543843 5188767 678544..679518 1 NC_009513.1 TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 679518 5188767 Lreu_0609 Lactobacillus reuteri DSM 20016 ribose-phosphate pyrophosphokinase YP_001271213.1 678544 D 557436 CDS YP_001271214.1 148543844 5188985 complement(679585..680586) 1 NC_009513.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 680586 dapF 5188985 dapF Lactobacillus reuteri DSM 20016 diaminopimelate epimerase YP_001271214.1 679585 R 557436 CDS YP_001271215.1 148543845 5188819 complement(680599..681957) 1 NC_009513.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive; aspartate kinase 681957 5188819 Lreu_0611 Lactobacillus reuteri DSM 20016 aspartate kinase YP_001271215.1 680599 R 557436 CDS YP_001271216.1 148543846 5188944 682438..683748 1 NC_009513.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase 683748 5188944 Lreu_0612 Lactobacillus reuteri DSM 20016 diaminopimelate decarboxylase YP_001271216.1 682438 D 557436 CDS YP_001271217.1 148543847 5188779 683785..684495 1 NC_009513.1 PFAM: transferase hexapeptide repeat containing protein; Tetrahydrodipicolinate succinyltransferase N-terminal domain protein; tetrahydrodipicolinate succinyltransferase domain-containing protein 684495 5188779 Lreu_0613 Lactobacillus reuteri DSM 20016 tetrahydrodipicolinate succinyltransferase domain-containing protein YP_001271217.1 683785 D 557436 CDS YP_001271218.1 148543848 5189880 684508..685653 1 NC_009513.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 685653 5189880 Lreu_0614 Lactobacillus reuteri DSM 20016 amidohydrolase YP_001271218.1 684508 D 557436 CDS YP_001271219.1 148543849 5189395 685681..686604 1 NC_009513.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 686604 5189395 Lreu_0615 Lactobacillus reuteri DSM 20016 dihydrodipicolinate synthase YP_001271219.1 685681 D 557436 CDS YP_001271220.1 148543850 5189533 686608..687387 1 NC_009513.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 687387 5189533 Lreu_0616 Lactobacillus reuteri DSM 20016 dihydrodipicolinate reductase YP_001271220.1 686608 D 557436 CDS YP_001271221.1 148543851 5190092 687400..688584 1 NC_009513.1 PFAM: aminotransferase, class I and II; aminotransferase 688584 5190092 Lreu_0617 Lactobacillus reuteri DSM 20016 aminotransferase YP_001271221.1 687400 D 557436 CDS YP_001271222.1 148543852 5190166 688604..689662 1 NC_009513.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region; aspartate semialdehyde dehydrogenase 689662 5190166 Lreu_0618 Lactobacillus reuteri DSM 20016 aspartate semialdehyde dehydrogenase YP_001271222.1 688604 D 557436 CDS YP_001271223.1 148543853 5188545 690969..692264 1 NC_009513.1 PFAM: Gluconate transporter; Citrate transporter; citrate transporter 692264 5188545 Lreu_0621 Lactobacillus reuteri DSM 20016 citrate transporter YP_001271223.1 690969 D 557436 CDS YP_001271224.1 148543854 5189568 692283..693434 1 NC_009513.1 PFAM: glycerate kinase; glycerate kinase 693434 5189568 Lreu_0622 Lactobacillus reuteri DSM 20016 glycerate kinase YP_001271224.1 692283 D 557436 CDS YP_001271225.1 148543855 5189583 693823..694173 1 NC_009513.1 hypothetical protein 694173 5189583 Lreu_0623 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271225.1 693823 D 557436 CDS YP_001271226.1 148543856 5189576 694166..694462 1 NC_009513.1 hypothetical protein 694462 5189576 Lreu_0624 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271226.1 694166 D 557436 CDS YP_001271227.1 148543857 5189076 694632..696032 1 NC_009513.1 PFAM: NLP/P60 protein; Peptidoglycan-binding LysM; NLP/P60 protein 696032 5189076 Lreu_0625 Lactobacillus reuteri DSM 20016 NLP/P60 protein YP_001271227.1 694632 D 557436 CDS YP_001271228.1 148543858 5189554 696185..696388 1 NC_009513.1 hypothetical protein 696388 5189554 Lreu_0626 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271228.1 696185 D 557436 CDS YP_001271229.1 148543859 5189859 complement(696461..697408) 1 NC_009513.1 PFAM: diacylglycerol kinase, catalytic region; diacylglycerol kinase catalytic protein 697408 5189859 Lreu_0627 Lactobacillus reuteri DSM 20016 diacylglycerol kinase catalytic protein YP_001271229.1 696461 R 557436 CDS YP_001271230.1 148543860 5190037 complement(697542..697754) 1 NC_009513.1 PFAM: protein of unknown function DUF1447; hypothetical protein 697754 5190037 Lreu_0628 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271230.1 697542 R 557436 CDS YP_001271231.1 148543861 5189489 697890..698366 1 NC_009513.1 hypothetical protein 698366 5189489 Lreu_0629 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271231.1 697890 D 557436 CDS YP_001271232.1 148543862 5189677 complement(698419..698979) 1 NC_009513.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 698979 def 5189677 def Lactobacillus reuteri DSM 20016 peptide deformylase YP_001271232.1 698419 R 557436 CDS YP_001271233.1 148543863 5189580 699235..700341 1 NC_009513.1 PFAM: dehydrogenase, E1 component; pyruvate dehydrogenase 700341 5189580 Lreu_0631 Lactobacillus reuteri DSM 20016 pyruvate dehydrogenase YP_001271233.1 699235 D 557436 CDS YP_001271234.1 148543864 5188968 700344..701321 1 NC_009513.1 PFAM: Transketolase, central region; Transketolase domain protein; transketolase domain-containing protein 701321 5188968 Lreu_0632 Lactobacillus reuteri DSM 20016 transketolase domain-containing protein YP_001271234.1 700344 D 557436 CDS YP_001271235.1 148543865 5189864 701353..702687 1 NC_009513.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; dihydrolipoyllysine-residue succinyltransferase 702687 5189864 Lreu_0633 Lactobacillus reuteri DSM 20016 dihydrolipoyllysine-residue succinyltransferase YP_001271235.1 701353 D 557436 CDS YP_001271236.1 148543866 5188859 702691..704118 1 NC_009513.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 704118 5188859 Lreu_0634 Lactobacillus reuteri DSM 20016 dihydrolipoamide dehydrogenase YP_001271236.1 702691 D 557436 CDS YP_001271237.1 148543867 5189620 704260..704568 1 NC_009513.1 PFAM: protein of unknown function UPF0223; hypothetical protein 704568 5189620 Lreu_0635 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271237.1 704260 D 557436 CDS YP_001271238.1 148543868 5189916 704561..705334 1 NC_009513.1 PFAM: inositol monophosphatase; inositol-phosphate phosphatase 705334 5189916 Lreu_0636 Lactobacillus reuteri DSM 20016 inositol-phosphate phosphatase YP_001271238.1 704561 D 557436 CDS YP_001271239.1 148543869 5189942 705441..707285 1 NC_009513.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; GTP-binding protein, HSR1-related; elongation factor Tu, domain 2 protein; GTP-binding protein TypA 707285 5189942 Lreu_0637 Lactobacillus reuteri DSM 20016 GTP-binding protein TypA YP_001271239.1 705441 D 557436 CDS YP_001271240.1 148543870 5188326 707379..708602 1 NC_009513.1 PFAM: cell cycle protein; cell cycle protein 708602 5188326 Lreu_0638 Lactobacillus reuteri DSM 20016 cell cycle protein YP_001271240.1 707379 D 557436 CDS YP_001271241.1 148543871 5188805 708595..708879 1 NC_009513.1 hypothetical protein 708879 5188805 Lreu_0639 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271241.1 708595 D 557436 CDS YP_001271242.1 148543872 5189549 708876..709439 1 NC_009513.1 TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein 95; methyltransferase 709439 5189549 Lreu_0640 Lactobacillus reuteri DSM 20016 methyltransferase YP_001271242.1 708876 D 557436 CDS YP_001271243.1 148543873 5188183 709439..709960 1 NC_009513.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 709960 coaD 5188183 coaD Lactobacillus reuteri DSM 20016 phosphopantetheine adenylyltransferase YP_001271243.1 709439 D 557436 CDS YP_001271244.1 148543874 5188826 709944..710996 1 NC_009513.1 PDZ domain-containing protein 710996 5188826 Lreu_0642 Lactobacillus reuteri DSM 20016 PDZ domain-containing protein YP_001271244.1 709944 D 557436 CDS YP_001271245.1 148543875 5189385 711090..711722 1 NC_009513.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding, class 1; helix-hairpin-helix repeat-containing competence protein ComEA 711722 5189385 Lreu_0643 Lactobacillus reuteri DSM 20016 helix-hairpin-helix repeat-containing competence protein ComEA YP_001271245.1 711090 D 557436 CDS YP_001271246.1 148543876 5188732 711786..712271 1 NC_009513.1 TIGRFAM: ComE operon protein 2; PFAM: CMP/dCMP deaminase, zinc-binding; ComE operon protein 2 712271 5188732 Lreu_0644 Lactobacillus reuteri DSM 20016 ComE operon protein 2 YP_001271246.1 711786 D 557436 CDS YP_001271247.1 148543877 5189262 712419..714548 1 NC_009513.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 714548 5189262 Lreu_0645 Lactobacillus reuteri DSM 20016 DNA internalization-related competence protein ComEC/Rec2 YP_001271247.1 712419 D 557436 CDS YP_001271248.1 148543878 5189461 714518..715549 1 NC_009513.1 TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; DNA polymerase III subunit delta 715549 5189461 Lreu_0646 Lactobacillus reuteri DSM 20016 DNA polymerase III subunit delta YP_001271248.1 714518 D 557436 CDS YP_001271249.1 148543879 5189634 complement(715644..715898) 1 NC_009513.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 715898 rpsT 5189634 rpsT Lactobacillus reuteri DSM 20016 30S ribosomal protein S20 YP_001271249.1 715644 R 557436 CDS YP_001271250.1 148543880 5188331 716160..716429 1 NC_009513.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 716429 rpsO 5188331 rpsO Lactobacillus reuteri DSM 20016 30S ribosomal protein S15 YP_001271250.1 716160 D 557436 CDS YP_001271251.1 148543881 5189612 716610..718391 1 NC_009513.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; beta-lactamase domain-containing protein 718391 5189612 Lreu_0649 Lactobacillus reuteri DSM 20016 beta-lactamase domain-containing protein YP_001271251.1 716610 D 557436 CDS YP_001271252.1 148543882 5189923 718508..719413 1 NC_009513.1 hypothetical protein 719413 5189923 Lreu_0650 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271252.1 718508 D 557436 CDS YP_001271253.1 148543883 5188704 719592..720782 1 NC_009513.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 720782 tuf 5188704 tuf Lactobacillus reuteri DSM 20016 elongation factor Tu YP_001271253.1 719592 D 557436 CDS YP_001271254.1 148543884 5189175 720978..722288 1 NC_009513.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 722288 tig 5189175 tig Lactobacillus reuteri DSM 20016 trigger factor YP_001271254.1 720978 D 557436 CDS YP_001271255.1 148543885 5188199 722464..723714 1 NC_009513.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 723714 clpX 5188199 clpX Lactobacillus reuteri DSM 20016 ATP-dependent protease ATP-binding subunit ClpX YP_001271255.1 722464 D 557436 CDS YP_001271256.1 148543886 5188812 723732..724322 1 NC_009513.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 724322 engB 5188812 engB Lactobacillus reuteri DSM 20016 ribosome biogenesis GTP-binding protein YsxC YP_001271256.1 723732 D 557436 CDS YP_001271257.1 148543887 5190083 724324..724623 1 NC_009513.1 PFAM: MazG nucleotide pyrophosphohydrolase; MazG nucleotide pyrophosphohydrolase 724623 5190083 Lreu_0655 Lactobacillus reuteri DSM 20016 MazG nucleotide pyrophosphohydrolase YP_001271257.1 724324 D 557436 CDS YP_001271258.1 148543888 5189511 complement(724667..724804) 1 NC_009513.1 hypothetical protein 724804 5189511 Lreu_0656 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271258.1 724667 R 557436 CDS YP_001271259.1 148543889 5189028 724948..726759 1 NC_009513.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 726759 uvrC 5189028 uvrC Lactobacillus reuteri DSM 20016 excinuclease ABC subunit C YP_001271259.1 724948 D 557436 CDS YP_001271260.1 148543890 5189056 726824..728140 1 NC_009513.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein, HSR1-related; GTP1/OBG sub domain protein; GTP1/OBG-like; GTP-binding protein Obg/CgtA 728140 5189056 Lreu_0658 Lactobacillus reuteri DSM 20016 GTP-binding protein Obg/CgtA YP_001271260.1 726824 D 557436 CDS YP_001271261.1 148543891 5189558 728173..729102 1 NC_009513.1 TIGRFAM: ribonuclease Z; PFAM: beta-lactamase domain protein; ribonuclease Z 729102 5189558 Lreu_0659 Lactobacillus reuteri DSM 20016 ribonuclease Z YP_001271261.1 728173 D 557436 CDS YP_001271262.1 148543892 5189804 729099..729953 1 NC_009513.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 729953 5189804 Lreu_0660 Lactobacillus reuteri DSM 20016 short-chain dehydrogenase/reductase SDR YP_001271262.1 729099 D 557436 CDS YP_001271263.1 148543893 5189522 730093..730560 1 NC_009513.1 PFAM: phosphoesterase, RecJ domain protein; phosphoesterase domain-containing protein 730560 5189522 Lreu_0661 Lactobacillus reuteri DSM 20016 phosphoesterase domain-containing protein YP_001271263.1 730093 D 557436 CDS YP_001271264.1 148543894 5189947 730574..730894 1 NC_009513.1 hypothetical protein 730894 5189947 Lreu_0662 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271264.1 730574 D 557436 CDS YP_001271265.1 148543895 5189711 731014..731286 1 NC_009513.1 hypothetical protein 731286 5189711 Lreu_0663 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271265.1 731014 D 557436 CDS YP_001271266.1 148543896 5188784 731304..731804 1 NC_009513.1 hypothetical protein 731804 5188784 Lreu_0664 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271266.1 731304 D 557436 CDS YP_001271267.1 148543897 5188145 731830..733221 1 NC_009513.1 TIGRFAM: phage/plasmid primase, P4 family; P4 family phage/plasmid primase 733221 5188145 Lreu_0665 Lactobacillus reuteri DSM 20016 P4 family phage/plasmid primase YP_001271267.1 731830 D 557436 CDS YP_001271268.1 148543898 5189408 733651..734010 1 NC_009513.1 TIGRFAM: phage head-tail adaptor, putative; phage head-tail adaptor 734010 5189408 Lreu_0666 Lactobacillus reuteri DSM 20016 phage head-tail adaptor YP_001271268.1 733651 D 557436 CDS YP_001271269.1 148543899 5189595 734025..734432 1 NC_009513.1 hypothetical protein 734432 5189595 Lreu_0667 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271269.1 734025 D 557436 CDS YP_001271270.1 148543900 5189465 734436..734960 1 NC_009513.1 PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 734960 5189465 Lreu_0668 Lactobacillus reuteri DSM 20016 HNH endonuclease YP_001271270.1 734436 D 557436 CDS YP_001271271.1 148543901 5188829 735307..735771 1 NC_009513.1 TIGRFAM: phage terminase, small subunit, putative, P27 family; PFAM: phage terminase, small subunit, putative, P27; P27 family phage terminase small subunit 735771 5188829 Lreu_0669 Lactobacillus reuteri DSM 20016 P27 family phage terminase small subunit YP_001271271.1 735307 D 557436 CDS YP_001271272.1 148543902 5189843 735771..737480 1 NC_009513.1 PFAM: phage Terminase; phage terminase 737480 5189843 Lreu_0670 Lactobacillus reuteri DSM 20016 phage terminase YP_001271272.1 735771 D 557436 CDS YP_001271273.1 148543903 5189608 737645..738763 1 NC_009513.1 TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; HK97 family phage portal protein 738763 5189608 Lreu_0671 Lactobacillus reuteri DSM 20016 HK97 family phage portal protein YP_001271273.1 737645 D 557436 CDS YP_001271274.1 148543904 5188324 738741..740261 1 NC_009513.1 TIGRFAM: phage prohead protease, HK97 family; phage major capsid protein, HK97 family; PFAM: peptidase U35, phage prohead HK97; phage major capsid protein, HK97; HK97 family phage major capsid protein 740261 5188324 Lreu_0672 Lactobacillus reuteri DSM 20016 HK97 family phage major capsid protein YP_001271274.1 738741 D 557436 CDS YP_001271275.1 148543905 5188739 740318..740740 1 NC_009513.1 TIGRFAM: phage transcriptional regulator, RinA family; RinA family phage transcriptional regulator 740740 5188739 Lreu_0673 Lactobacillus reuteri DSM 20016 RinA family phage transcriptional regulator YP_001271275.1 740318 D 557436 CDS YP_001271276.1 148543906 5190039 740756..741034 1 NC_009513.1 TIGRFAM: uncharacterized phage protein (possible DNA packaging); PFAM: Uncharacterized phage protein (possible DNA packaging); phage protein DNA packaging protein 741034 5190039 Lreu_0674 Lactobacillus reuteri DSM 20016 phage protein DNA packaging protein YP_001271276.1 740756 D 557436 CDS YP_001271277.1 148543907 5189708 742062..742730 1 NC_009513.1 PFAM: ribonuclease H; RNase HI 742730 5189708 Lreu_0675 Lactobacillus reuteri DSM 20016 RNase HI YP_001271277.1 742062 D 557436 CDS YP_001271278.1 148543908 5189557 742756..743913 1 NC_009513.1 TIGRFAM: hydroxymethylglutaryl-CoA synthase; PFAM: Hydroxymethylglutaryl-coenzyme A synthase, N-terminal domain; Hydroxymethylglutaryl-coenzyme A synthase C terminal domain protein; hydroxymethylglutaryl-CoA synthase 743913 5189557 Lreu_0676 Lactobacillus reuteri DSM 20016 hydroxymethylglutaryl-CoA synthase YP_001271278.1 742756 D 557436 CDS YP_001271279.1 148543909 5188992 complement(743954..744580) 1 NC_009513.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 744580 5188992 Lreu_0677 Lactobacillus reuteri DSM 20016 LexA repressor YP_001271279.1 743954 R 557436 CDS YP_001271280.1 148543910 5189941 744709..744960 1 NC_009513.1 PFAM: protein of unknown function DUF896; hypothetical protein 744960 5189941 Lreu_0678 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271280.1 744709 D 557436 CDS YP_001271281.1 148543911 5188918 745049..745261 1 NC_009513.1 PFAM: protein of unknown function UPF0154; hypothetical protein 745261 5188918 Lreu_0679 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271281.1 745049 D 557436 CDS YP_001271282.1 148543912 5189528 complement(745305..745943) 1 NC_009513.1 PFAM: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 745943 5189528 Lreu_0680 Lactobacillus reuteri DSM 20016 phospholipid/glycerol acyltransferase YP_001271282.1 745305 R 557436 CDS YP_001271283.1 148543913 5189825 746038..746793 1 NC_009513.1 O-methyltransferase-like protein 746793 5189825 Lreu_0681 Lactobacillus reuteri DSM 20016 O-methyltransferase-like protein YP_001271283.1 746038 D 557436 CDS YP_001271284.1 148543914 5189927 746783..747073 1 NC_009513.1 PFAM: Excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C 747073 5189927 Lreu_0682 Lactobacillus reuteri DSM 20016 excinuclease ABC subunit C YP_001271284.1 746783 D 557436 CDS YP_001271285.1 148543915 5189932 747075..748067 1 NC_009513.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 748067 5189932 Lreu_0683 Lactobacillus reuteri DSM 20016 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit YP_001271285.1 747075 D 557436 CDS YP_001271286.1 148543916 5188783 748230..749018 1 NC_009513.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 749018 rpsB 5188783 rpsB Lactobacillus reuteri DSM 20016 30S ribosomal protein S2 YP_001271286.1 748230 D 557436 CDS YP_001271287.1 148543917 5189756 749117..749992 1 NC_009513.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 749992 tsf 5189756 tsf Lactobacillus reuteri DSM 20016 elongation factor Ts YP_001271287.1 749117 D 557436 CDS YP_001271288.1 148543918 5189808 750074..750796 1 NC_009513.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 750796 pyrH 5189808 pyrH Lactobacillus reuteri DSM 20016 uridylate kinase YP_001271288.1 750074 D 557436 CDS YP_001271289.1 148543919 5188387 750801..751364 1 NC_009513.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 751364 frr 5188387 frr Lactobacillus reuteri DSM 20016 ribosome recycling factor YP_001271289.1 750801 D 557436 CDS YP_001271290.1 148543920 5189543 751860..753032 1 NC_009513.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 753032 5189543 Lreu_0688 Lactobacillus reuteri DSM 20016 RNA-directed DNA polymerase YP_001271290.1 751860 D 557436 CDS YP_001271291.1 148543921 5189602 753491..753949 1 NC_009513.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 753949 5189602 Lreu_0689 Lactobacillus reuteri DSM 20016 transposase IS200-family protein YP_001271291.1 753491 D 557436 CDS YP_001271292.1 148543922 5188862 754218..755030 1 NC_009513.1 TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl pyrophosphate synthetase 755030 5188862 Lreu_0690 Lactobacillus reuteri DSM 20016 undecaprenyl pyrophosphate synthetase YP_001271292.1 754218 D 557436 CDS YP_001271293.1 148543923 5188927 755050..755835 1 NC_009513.1 PFAM: phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 755835 5188927 Lreu_0691 Lactobacillus reuteri DSM 20016 phosphatidate cytidylyltransferase YP_001271293.1 755050 D 557436 CDS YP_001271294.1 148543924 5189424 755858..757132 1 NC_009513.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; membrane-associated zinc metalloprotease 757132 5189424 Lreu_0692 Lactobacillus reuteri DSM 20016 membrane-associated zinc metalloprotease YP_001271294.1 755858 D 557436 CDS YP_001271295.1 148543925 5188806 757161..758894 1 NC_009513.1 TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; YbaK/prolyl-tRNA synthetase associated region; prolyl-tRNA synthetase 758894 5188806 Lreu_0693 Lactobacillus reuteri DSM 20016 prolyl-tRNA synthetase YP_001271295.1 757161 D 557436 CDS YP_001271296.1 148543926 5189546 758970..763301 1 NC_009513.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity; DNA polymerase III PolC 763301 polC 5189546 polC Lactobacillus reuteri DSM 20016 DNA polymerase III PolC YP_001271296.1 758970 D 557436 CDS YP_001271297.1 148543927 5189644 763435..763908 1 NC_009513.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 763908 5189644 Lreu_0695 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271297.1 763435 D 557436 CDS YP_001271298.1 148543928 5188645 763929..765116 1 NC_009513.1 TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; NusA N-terminal domain protein; SMART: KH domain protein; NusA antitermination factor 765116 5188645 Lreu_0696 Lactobacillus reuteri DSM 20016 NusA antitermination factor YP_001271298.1 763929 D 557436 CDS YP_001271299.1 148543929 5188265 765145..765447 1 NC_009513.1 PFAM: protein of unknown function DUF448; hypothetical protein 765447 5188265 Lreu_0697 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271299.1 765145 D 557436 CDS YP_001271300.1 148543930 5188707 765434..765745 1 NC_009513.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; 50S ribosomal protein L7AE 765745 5188707 Lreu_0698 Lactobacillus reuteri DSM 20016 50S ribosomal protein L7AE YP_001271300.1 765434 D 557436 CDS YP_001271301.1 148543931 5189299 765759..768017 1 NC_009513.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 768017 infB 5189299 infB Lactobacillus reuteri DSM 20016 translation initiation factor IF-2 YP_001271301.1 765759 D 557436 CDS YP_001271302.1 148543932 5188671 768037..768396 1 NC_009513.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 768396 rbfA 5188671 rbfA Lactobacillus reuteri DSM 20016 ribosome-binding factor A YP_001271302.1 768037 D 557436 CDS YP_001271303.1 148543933 5188325 768594..769499 1 NC_009513.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 769499 truB 5188325 truB Lactobacillus reuteri DSM 20016 tRNA pseudouridine synthase B YP_001271303.1 768594 D 557436 CDS YP_001271304.1 148543934 5189069 769512..770459 1 NC_009513.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; riboflavin kinase/FMN adenylyltransferase 770459 5189069 Lreu_0702 Lactobacillus reuteri DSM 20016 riboflavin kinase/FMN adenylyltransferase YP_001271304.1 769512 D 557436 CDS YP_001271305.1 148543935 5189098 complement(770520..770891) 1 NC_009513.1 hypothetical protein 770891 5189098 Lreu_0703 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271305.1 770520 R 557436 CDS YP_001271306.1 148543936 5189045 771012..772064 1 NC_009513.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 772064 hrcA 5189045 hrcA Lactobacillus reuteri DSM 20016 heat-inducible transcription repressor YP_001271306.1 771012 D 557436 CDS YP_001271307.1 148543937 5189387 772077..772649 1 NC_009513.1 PFAM: GrpE protein; GrpE protein HSP-70 cofactor 772649 5189387 Lreu_0705 Lactobacillus reuteri DSM 20016 GrpE protein HSP-70 cofactor YP_001271307.1 772077 D 557436 CDS YP_001271308.1 148543938 5189643 772674..774539 1 NC_009513.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 774539 dnaK 5189643 dnaK Lactobacillus reuteri DSM 20016 molecular chaperone DnaK YP_001271308.1 772674 D 557436 CDS YP_001271309.1 148543939 5188261 774668..775819 1 NC_009513.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 775819 5188261 Lreu_0707 Lactobacillus reuteri DSM 20016 chaperone protein DnaJ YP_001271309.1 774668 D 557436 CDS YP_001271310.1 148543940 5189084 775950..777785 1 NC_009513.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 777785 5189084 Lreu_0708 Lactobacillus reuteri DSM 20016 GTP-binding protein LepA YP_001271310.1 775950 D 557436 CDS YP_001271311.1 148543941 5189293 complement(777936..779096) 1 NC_009513.1 PFAM: phage integrase family protein; phage integrase family protein 779096 5189293 Lreu_0709 Lactobacillus reuteri DSM 20016 phage integrase family protein YP_001271311.1 777936 R 557436 CDS YP_001271312.1 148543942 5188685 complement(779220..779954) 1 NC_009513.1 hypothetical protein 779954 5188685 Lreu_0710 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271312.1 779220 R 557436 CDS YP_001271313.1 148543943 5188392 complement(780247..780696) 1 NC_009513.1 hypothetical protein 780696 5188392 Lreu_0711 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271313.1 780247 R 557436 CDS YP_001271314.1 148543944 5189144 complement(780795..781253) 1 NC_009513.1 hypothetical protein 781253 5189144 Lreu_0712 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271314.1 780795 R 557436 CDS YP_001271315.1 148543945 5189603 782298..783713 1 NC_009513.1 PFAM: peptidase U34, dipeptidase; peptidase U34, dipeptidase 783713 5189603 Lreu_0714 Lactobacillus reuteri DSM 20016 peptidase U34, dipeptidase YP_001271315.1 782298 D 557436 CDS YP_001271316.1 148543946 5189311 783786..784862 1 NC_009513.1 PFAM: Malate/L-lactate dehydrogenase; malate/L-lactate dehydrogenase 784862 5189311 Lreu_0715 Lactobacillus reuteri DSM 20016 malate/L-lactate dehydrogenase YP_001271316.1 783786 D 557436 CDS YP_001271317.1 148543947 5189326 complement(785096..786055) 1 NC_009513.1 TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; malate dehydrogenase (NAD) 786055 5189326 Lreu_0716 Lactobacillus reuteri DSM 20016 malate dehydrogenase (NAD) YP_001271317.1 785096 R 557436 CDS YP_001271318.1 148543948 5189269 786505..786843 1 NC_009513.1 hypothetical protein 786843 5189269 Lreu_0717 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271318.1 786505 D 557436 CDS YP_001271319.1 148543949 5189223 786921..787880 1 NC_009513.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 787880 prmA 5189223 prmA Lactobacillus reuteri DSM 20016 50S ribosomal protein L11 methyltransferase YP_001271319.1 786921 D 557436 CDS YP_001271320.1 148543950 5189279 787881..788621 1 NC_009513.1 PFAM: protein of unknown function DUF558; hypothetical protein 788621 5189279 Lreu_0719 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271320.1 787881 D 557436 CDS YP_001271321.1 148543951 5188605 788700..789035 1 NC_009513.1 hypothetical protein 789035 5188605 Lreu_0720 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271321.1 788700 D 557436 CDS YP_001271322.1 148543952 5189601 789054..791291 1 NC_009513.1 TIGRFAM: RelA/SpoT family protein; PFAM: TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region; (p)ppGpp synthetase I SpoT/RelA 791291 5189601 Lreu_0721 Lactobacillus reuteri DSM 20016 (p)ppGpp synthetase I SpoT/RelA YP_001271322.1 789054 D 557436 CDS YP_001271323.1 148543953 5189312 791302..791739 1 NC_009513.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 791739 5189312 Lreu_0722 Lactobacillus reuteri DSM 20016 D-tyrosyl-tRNA(Tyr) deacylase YP_001271323.1 791302 D 557436 CDS YP_001271324.1 148543954 5189812 complement(791897..792745) 1 NC_009513.1 PFAM: aminoglycoside phosphotransferase; fructosamine kinase; aminoglycoside phosphotransferase 792745 5189812 Lreu_0723 Lactobacillus reuteri DSM 20016 aminoglycoside phosphotransferase YP_001271324.1 791897 R 557436 CDS YP_001271325.1 148543955 5189907 793127..794929 1 NC_009513.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 794929 aspS 5189907 aspS Lactobacillus reuteri DSM 20016 aspartyl-tRNA synthetase YP_001271325.1 793127 D 557436 CDS YP_001271326.1 148543956 5189088 795158..795616 1 NC_009513.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 795616 5189088 Lreu_0725 Lactobacillus reuteri DSM 20016 transposase IS200-family protein YP_001271326.1 795158 D 557436 CDS YP_001271327.1 148543957 5189276 complement(795756..796499) 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 796499 5189276 Lreu_0726 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001271327.1 795756 R 557436 CDS YP_001271328.1 148543958 5189219 complement(796489..798000) 1 NC_009513.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; extracellular solute-binding protein, family 3; polar amino acid ABC transporter inner membrane protein 798000 5189219 Lreu_0727 Lactobacillus reuteri DSM 20016 polar amino acid ABC transporter inner membrane protein YP_001271328.1 796489 R 557436 CDS YP_001271329.1 148543959 5188345 798300..798491 1 NC_009513.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 798491 rpsU 5188345 rpsU Lactobacillus reuteri DSM 20016 30S ribosomal protein S21 YP_001271329.1 798300 D 557436 CDS YP_001271330.1 148543960 5189283 798551..798997 1 NC_009513.1 PFAM: GatB/Yqey domain protein; GatB/Yqey domain-containing protein 798997 5189283 Lreu_0729 Lactobacillus reuteri DSM 20016 GatB/Yqey domain-containing protein YP_001271330.1 798551 D 557436 CDS YP_001271331.1 148543961 5189358 799117..800094 1 NC_009513.1 PFAM: Choloylglycine hydrolase; choloylglycine hydrolase 800094 5189358 Lreu_0730 Lactobacillus reuteri DSM 20016 choloylglycine hydrolase YP_001271331.1 799117 D 557436 CDS YP_001271332.1 148543962 5189344 800254..801486 1 NC_009513.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 801486 5189344 Lreu_0731 Lactobacillus reuteri DSM 20016 argininosuccinate synthase YP_001271332.1 800254 D 557436 CDS YP_001271333.1 148543963 5189935 801476..802861 1 NC_009513.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 802861 5189935 Lreu_0732 Lactobacillus reuteri DSM 20016 argininosuccinate lyase YP_001271333.1 801476 D 557436 CDS YP_001271334.1 148543964 5189230 802990..803562 1 NC_009513.1 PFAM: BioY protein; BioY protein 803562 5189230 Lreu_0733 Lactobacillus reuteri DSM 20016 BioY protein YP_001271334.1 802990 D 557436 CDS YP_001271335.1 148543965 5189158 803568..804539 1 NC_009513.1 TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; Helix-turn-helix, type 11 domain protein; biotin--acetyl-CoA-carboxylase ligase 804539 5189158 Lreu_0734 Lactobacillus reuteri DSM 20016 biotin--acetyl-CoA-carboxylase ligase YP_001271335.1 803568 D 557436 CDS YP_001271336.1 148543966 5188162 804639..805646 1 NC_009513.1 PFAM: PhoH family protein; PhoH family protein 805646 5188162 Lreu_0735 Lactobacillus reuteri DSM 20016 PhoH family protein YP_001271336.1 804639 D 557436 CDS YP_001271337.1 148543967 5189177 805646..806125 1 NC_009513.1 PFAM: protein of unknown function UPF0054; hypothetical protein 806125 5189177 Lreu_0736 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271337.1 805646 D 557436 CDS YP_001271338.1 148543968 5188299 806109..806504 1 NC_009513.1 PFAM: diacylglycerol kinase; diacylglycerol kinase 806504 5188299 Lreu_0737 Lactobacillus reuteri DSM 20016 diacylglycerol kinase YP_001271338.1 806109 D 557436 CDS YP_001271339.1 148543969 5189226 806516..807421 1 NC_009513.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; KH, type 2 domain protein; Miro domain protein; GTP-binding protein Era 807421 5189226 Lreu_0738 Lactobacillus reuteri DSM 20016 GTP-binding protein Era YP_001271339.1 806516 D 557436 CDS YP_001271340.1 148543970 5190086 807437..808222 1 NC_009513.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O, RecO; DNA replication and repair protein RecO 808222 5190086 Lreu_0739 Lactobacillus reuteri DSM 20016 DNA replication and repair protein RecO YP_001271340.1 807437 D 557436 CDS YP_001271341.1 148543971 5188485 808483..809469 1 NC_009513.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 809469 glyQ 5188485 glyQ Lactobacillus reuteri DSM 20016 glycyl-tRNA synthetase subunit alpha YP_001271341.1 808483 D 557436 CDS YP_001271342.1 148543972 5188839 809471..811546 1 NC_009513.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 811546 glyS 5188839 glyS Lactobacillus reuteri DSM 20016 glycyl-tRNA synthetase subunit beta YP_001271342.1 809471 D 557436 CDS YP_001271343.1 148543973 5189778 811681..813546 1 NC_009513.1 TIGRFAM: DNA primase; PFAM: zinc finger, CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core, N-terminal domain; SMART: Toprim sub domain protein; DNA primase 813546 5189778 Lreu_0742 Lactobacillus reuteri DSM 20016 DNA primase YP_001271343.1 811681 D 557436 CDS YP_001271344.1 148543974 5189913 813548..814690 1 NC_009513.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium; RNA polymerase sigma factor RpoD 814690 5189913 Lreu_0743 Lactobacillus reuteri DSM 20016 RNA polymerase sigma factor RpoD YP_001271344.1 813548 D 557436 CDS YP_001271345.1 148543975 5189777 814888..816072 1 NC_009513.1 PFAM: aminotransferase, class I and II; aminotransferase 816072 5189777 Lreu_0744 Lactobacillus reuteri DSM 20016 aminotransferase YP_001271345.1 814888 D 557436 CDS YP_001271346.1 148543976 5189841 complement(816142..817524) 1 NC_009513.1 hypothetical protein 817524 5189841 Lreu_0745 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271346.1 816142 R 557436 CDS YP_001271347.1 148543977 5189100 817749..818456 1 NC_009513.1 PFAM: protein of unknown function DUF633; hypothetical protein 818456 5189100 Lreu_0746 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271347.1 817749 D 557436 CDS YP_001271348.1 148543978 5188368 818443..819267 1 NC_009513.1 PFAM: protein of unknown function DUF34; hypothetical protein 819267 5188368 Lreu_0747 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271348.1 818443 D 557436 CDS YP_001271349.1 148543979 5188689 819292..820542 1 NC_009513.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 820542 5188689 Lreu_0748 Lactobacillus reuteri DSM 20016 peptidase T YP_001271349.1 819292 D 557436 CDS YP_001271350.1 148543980 5189317 complement(820584..820826) 1 NC_009513.1 hypothetical protein 820826 5189317 Lreu_0749 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271350.1 820584 R 557436 CDS YP_001271351.1 148543981 5188621 820909..824256 1 NC_009513.1 TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP C-terminal domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; DNA polymerase III catalytic subunit, DnaE type 824256 5188621 Lreu_0750 Lactobacillus reuteri DSM 20016 DNA polymerase III catalytic subunit, DnaE type YP_001271351.1 820909 D 557436 CDS YP_001271352.1 148543982 5188644 824442..825863 1 NC_009513.1 TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; pyruvate kinase 825863 5188644 Lreu_0751 Lactobacillus reuteri DSM 20016 pyruvate kinase YP_001271352.1 824442 D 557436 CDS YP_001271353.1 148543983 5188994 826005..826886 1 NC_009513.1 hypothetical protein 826886 5188994 Lreu_0752 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271353.1 826005 D 557436 CDS YP_001271354.1 148543984 5188159 826886..827779 1 NC_009513.1 PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; tyrosine recombinase XerD subunit 827779 5188159 Lreu_0753 Lactobacillus reuteri DSM 20016 tyrosine recombinase XerD subunit YP_001271354.1 826886 D 557436 CDS YP_001271355.1 148543985 5188998 827793..828149 1 NC_009513.1 hypothetical protein 828149 5188998 Lreu_0754 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271355.1 827793 D 557436 CDS YP_001271356.1 148543986 5188743 828142..828933 1 NC_009513.1 PFAM: chromosome segregation and condensation protein ScpA; condensin subunit ScpA 828933 5188743 Lreu_0755 Lactobacillus reuteri DSM 20016 condensin subunit ScpA YP_001271356.1 828142 D 557436 CDS YP_001271357.1 148543987 5188850 828896..829501 1 NC_009513.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; condensin subunit ScpB 829501 5188850 Lreu_0756 Lactobacillus reuteri DSM 20016 condensin subunit ScpB YP_001271357.1 828896 D 557436 CDS YP_001271358.1 148543988 5188878 829501..830217 1 NC_009513.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; ribosomal large subunit pseudouridine synthase B 830217 5188878 Lreu_0757 Lactobacillus reuteri DSM 20016 ribosomal large subunit pseudouridine synthase B YP_001271358.1 829501 D 557436 CDS YP_001271359.1 148543989 5188780 830610..831188 1 NC_009513.1 hypothetical protein 831188 5188780 Lreu_0758 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271359.1 830610 D 557436 CDS YP_001271360.1 148543990 5189405 831289..832314 1 NC_009513.1 hypothetical protein 832314 5189405 Lreu_0759 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271360.1 831289 D 557436 CDS YP_001271361.1 148543991 5189797 832304..833743 1 NC_009513.1 TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; type III restriction protein, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; ATP-dependent DNA helicase RecQ 833743 5189797 Lreu_0760 Lactobacillus reuteri DSM 20016 ATP-dependent DNA helicase RecQ YP_001271361.1 832304 D 557436 CDS YP_001271362.1 148543992 5189406 833828..834400 1 NC_009513.1 hypothetical protein 834400 5189406 Lreu_0761 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271362.1 833828 D 557436 CDS YP_001271363.1 148543993 5189165 834474..835160 1 NC_009513.1 TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase 835160 5189165 Lreu_0762 Lactobacillus reuteri DSM 20016 cytidylate kinase YP_001271363.1 834474 D 557436 CDS YP_001271364.1 148543994 5188828 835233..836483 1 NC_009513.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 836483 rpsA 5188828 rpsA Lactobacillus reuteri DSM 20016 30S ribosomal protein S1 YP_001271364.1 835233 D 557436 CDS YP_001271365.1 148543995 5188835 836713..838026 1 NC_009513.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 838026 engA 5188835 engA Lactobacillus reuteri DSM 20016 GTP-binding protein EngA YP_001271365.1 836713 D 557436 CDS YP_001271366.1 148543996 5188786 838236..838511 1 NC_009513.1 PFAM: histone family protein DNA-binding protein; nucleoid protein Hbs 838511 5188786 Lreu_0765 Lactobacillus reuteri DSM 20016 nucleoid protein Hbs YP_001271366.1 838236 D 557436 CDS YP_001271367.1 148543997 5188925 838647..839912 1 NC_009513.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; hypothetical protein 839912 5188925 Lreu_0766 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271367.1 838647 D 557436 CDS YP_001271368.1 148543998 5188952 840038..841249 1 NC_009513.1 catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity; tRNA CCA-pyrophosphorylase 841249 5188952 Lreu_0767 Lactobacillus reuteri DSM 20016 tRNA CCA-pyrophosphorylase YP_001271368.1 840038 D 557436 CDS YP_001271369.1 148543999 5188834 841251..843161 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 843161 5188834 Lreu_0768 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001271369.1 841251 D 557436 CDS YP_001271370.1 148544000 5188966 843180..844142 1 NC_009513.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 844142 thyA 5188966 thyA Lactobacillus reuteri DSM 20016 thymidylate synthase YP_001271370.1 843180 D 557436 CDS YP_001271371.1 148544001 5189798 844158..844646 1 NC_009513.1 PFAM: dihydrofolate reductase region; dihydrofolate reductase 844646 5189798 Lreu_0770 Lactobacillus reuteri DSM 20016 dihydrofolate reductase YP_001271371.1 844158 D 557436 CDS YP_001271372.1 148544002 5189805 complement(844635..845279) 1 NC_009513.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; hemolysin III family channel protein 845279 5189805 Lreu_0771 Lactobacillus reuteri DSM 20016 hemolysin III family channel protein YP_001271372.1 844635 R 557436 CDS YP_001271373.1 148544003 5190012 845458..846300 1 NC_009513.1 TIGRFAM: degV family protein; PFAM: DegV family protein; degV family protein 846300 5190012 Lreu_0772 Lactobacillus reuteri DSM 20016 degV family protein YP_001271373.1 845458 D 557436 CDS YP_001271374.1 148544004 5190074 846393..847319 1 NC_009513.1 PFAM: lipolytic protein, G-D-S-L family; GDSL family lipase 847319 5190074 Lreu_0773 Lactobacillus reuteri DSM 20016 GDSL family lipase YP_001271374.1 846393 D 557436 CDS YP_001271375.1 148544005 5190056 847322..847924 1 NC_009513.1 hypothetical protein 847924 5190056 Lreu_0774 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271375.1 847322 D 557436 CDS YP_001271376.1 148544006 5189498 847943..848164 1 NC_009513.1 PFAM: protein of unknown function DUF1250; hypothetical protein 848164 5189498 Lreu_0775 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271376.1 847943 D 557436 CDS YP_001271377.1 148544007 5189730 848185..849057 1 NC_009513.1 PFAM: GTP-binding protein, HSR1-related; GTP-binding protein YlqF 849057 5189730 Lreu_0776 Lactobacillus reuteri DSM 20016 GTP-binding protein YlqF YP_001271377.1 848185 D 557436 CDS YP_001271378.1 148544008 5189651 849050..849820 1 NC_009513.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 849820 rnhB 5189651 rnhB Lactobacillus reuteri DSM 20016 ribonuclease HII YP_001271378.1 849050 D 557436 CDS YP_001271379.1 148544009 5189642 849871..850746 1 NC_009513.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; DNA protecting protein DprA 850746 5189642 Lreu_0778 Lactobacillus reuteri DSM 20016 DNA protecting protein DprA YP_001271379.1 849871 D 557436 CDS YP_001271380.1 148544010 5189822 850868..852988 1 NC_009513.1 TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; DNA topoisomerase, type IA, zn finger domain protein; SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein; DNA topoisomerase I 852988 5189822 Lreu_0779 Lactobacillus reuteri DSM 20016 DNA topoisomerase I YP_001271380.1 850868 D 557436 CDS YP_001271381.1 148544011 5189753 853123..854001 1 NC_009513.1 PFAM: Aldose 1-epimerase; aldose 1-epimerase 854001 5189753 Lreu_0780 Lactobacillus reuteri DSM 20016 aldose 1-epimerase YP_001271381.1 853123 D 557436 CDS YP_001271382.1 148544012 5190141 complement(854043..854672) 1 NC_009513.1 PFAM: protein of unknown function DUF205; membrane protein 854672 5190141 Lreu_0781 Lactobacillus reuteri DSM 20016 membrane protein YP_001271382.1 854043 R 557436 CDS YP_001271383.1 148544013 5190142 854883..856907 1 NC_009513.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 856907 5190142 Lreu_0782 Lactobacillus reuteri DSM 20016 DNA topoisomerase IV subunit B YP_001271383.1 854883 D 557436 CDS YP_001271384.1 148544014 5189827 856926..859391 1 NC_009513.1 TIGRFAM: DNA topoisomerase IV, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; DNA topoisomerase IV subunit A 859391 5189827 Lreu_0783 Lactobacillus reuteri DSM 20016 DNA topoisomerase IV subunit A YP_001271384.1 856926 D 557436 CDS YP_001271385.1 148544015 5189678 859408..859875 1 NC_009513.1 PFAM: NUDIX hydrolase; NUDIX hydrolase 859875 5189678 Lreu_0784 Lactobacillus reuteri DSM 20016 NUDIX hydrolase YP_001271385.1 859408 D 557436 CDS YP_001271386.1 148544016 5190130 859984..860919 1 NC_009513.1 PFAM: phosphoesterase, RecJ domain protein; DHHA2 domain protein; inorganic diphosphatase 860919 5190130 Lreu_0785 Lactobacillus reuteri DSM 20016 inorganic diphosphatase YP_001271386.1 859984 D 557436 CDS YP_001271387.1 148544017 5189705 complement(860952..861920) 1 NC_009513.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 861920 5189705 Lreu_0786 Lactobacillus reuteri DSM 20016 integrase catalytic subunit YP_001271387.1 860952 R 557436 CDS YP_001271388.1 148544018 5189998 862129..862518 1 NC_009513.1 hypothetical protein 862518 5189998 Lreu_0787 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271388.1 862129 D 557436 CDS YP_001271389.1 148544019 5188810 863202..863696 1 NC_009513.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 863696 5188810 Lreu_0789 Lactobacillus reuteri DSM 20016 N-acetyltransferase GCN5 YP_001271389.1 863202 D 557436 CDS YP_001271390.1 148544020 5189813 complement(863851..864234) 1 NC_009513.1 PFAM: protein of unknown function DUF322; hypothetical protein 864234 5189813 Lreu_0790 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271390.1 863851 R 557436 CDS YP_001271391.1 148544021 5190052 complement(864252..864443) 1 NC_009513.1 hypothetical protein 864443 5190052 Lreu_0791 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271391.1 864252 R 557436 CDS YP_001271392.1 148544022 5189373 complement(864458..865003) 1 NC_009513.1 hypothetical protein 865003 5189373 Lreu_0792 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271392.1 864458 R 557436 CDS YP_001271393.1 148544023 5190094 complement(865183..866712) 1 NC_009513.1 PFAM: carbohydrate kinase, FGGY; carbohydrate kinase FGGY 866712 5190094 Lreu_0793 Lactobacillus reuteri DSM 20016 carbohydrate kinase FGGY YP_001271393.1 865183 R 557436 CDS YP_001271394.1 148544024 5190077 complement(866763..867782) 1 NC_009513.1 PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 867782 5190077 Lreu_0794 Lactobacillus reuteri DSM 20016 LacI family transcriptional regulator YP_001271394.1 866763 R 557436 CDS YP_001271395.1 148544025 5189823 complement(867862..868998) 1 NC_009513.1 TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; gluconate transporter 868998 5189823 Lreu_0795 Lactobacillus reuteri DSM 20016 gluconate transporter YP_001271395.1 867862 R 557436 CDS YP_001271396.1 148544026 5189891 complement(869104..870369) 1 NC_009513.1 PFAM: Resolvase, N-terminal domain; Recombinase; recombinase 870369 5189891 Lreu_0796 Lactobacillus reuteri DSM 20016 recombinase YP_001271396.1 869104 R 557436 CDS YP_001271397.1 148544027 5190146 complement(870837..871694) 1 NC_009513.1 hypothetical protein 871694 5190146 Lreu_0797 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271397.1 870837 R 557436 CDS YP_001271398.1 148544028 5189840 complement(871715..872236) 1 NC_009513.1 hypothetical protein 872236 5189840 Lreu_0798 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271398.1 871715 R 557436 CDS YP_001271399.1 148544029 5189564 complement(872250..872654) 1 NC_009513.1 hypothetical protein 872654 5189564 Lreu_0799 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271399.1 872250 R 557436 CDS YP_001271400.1 148544030 5189853 complement(872708..873112) 1 NC_009513.1 hypothetical protein 873112 5189853 Lreu_0800 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271400.1 872708 R 557436 CDS YP_001271401.1 148544031 5189713 complement(873129..873464) 1 NC_009513.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 873464 5189713 Lreu_0801 Lactobacillus reuteri DSM 20016 XRE family transcriptional regulator YP_001271401.1 873129 R 557436 CDS YP_001271402.1 148544032 5189849 873625..873840 1 NC_009513.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 873840 5189849 Lreu_0802 Lactobacillus reuteri DSM 20016 XRE family transcriptional regulator YP_001271402.1 873625 D 557436 CDS YP_001271403.1 148544033 5189530 873859..874632 1 NC_009513.1 PFAM: BRO domain protein domain protein; phage antirepressor protein; prophage antirepressor 874632 5189530 Lreu_0803 Lactobacillus reuteri DSM 20016 prophage antirepressor YP_001271403.1 873859 D 557436 CDS YP_001271404.1 148544034 5188884 874644..874772 1 NC_009513.1 hypothetical protein 874772 5188884 Lreu_0804 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271404.1 874644 D 557436 CDS YP_001271405.1 148544035 5190011 874792..874911 1 NC_009513.1 hypothetical protein 874911 5190011 Lreu_0805 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271405.1 874792 D 557436 CDS YP_001271406.1 148544036 5188934 874908..875111 1 NC_009513.1 hypothetical protein 875111 5188934 Lreu_0806 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271406.1 874908 D 557436 CDS YP_001271407.1 148544037 5189878 875108..875356 1 NC_009513.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 875356 5189878 Lreu_0807 Lactobacillus reuteri DSM 20016 XRE family transcriptional regulator YP_001271407.1 875108 D 557436 CDS YP_001271408.1 148544038 5189873 875334..875537 1 NC_009513.1 hypothetical protein 875537 5189873 Lreu_0808 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271408.1 875334 D 557436 CDS YP_001271409.1 148544039 5190167 875552..875728 1 NC_009513.1 hypothetical protein 875728 5190167 Lreu_0809 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271409.1 875552 D 557436 CDS YP_001271410.1 148544040 5190010 875728..876000 1 NC_009513.1 SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 876000 5190010 Lreu_0810 Lactobacillus reuteri DSM 20016 XRE family transcriptional regulator YP_001271410.1 875728 D 557436 CDS YP_001271411.1 148544041 5190159 875993..876922 1 NC_009513.1 PFAM: RecT protein; RecT protein 876922 5190159 Lreu_0811 Lactobacillus reuteri DSM 20016 RecT protein YP_001271411.1 875993 D 557436 CDS YP_001271412.1 148544042 5189883 876906..877730 1 NC_009513.1 hypothetical protein 877730 5189883 Lreu_0812 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271412.1 876906 D 557436 CDS YP_001271413.1 148544043 5189361 877735..878592 1 NC_009513.1 TIGRFAM: primosome, DnaD subunit; primosome subunit DnaD 878592 5189361 Lreu_0813 Lactobacillus reuteri DSM 20016 primosome subunit DnaD YP_001271413.1 877735 D 557436 CDS YP_001271414.1 148544044 5189791 878585..878914 1 NC_009513.1 hypothetical protein 878914 5189791 Lreu_0814 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271414.1 878585 D 557436 CDS YP_001271415.1 148544045 5190097 878911..879282 1 NC_009513.1 hypothetical protein 879282 5190097 Lreu_0815 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271415.1 878911 D 557436 CDS YP_001271416.1 148544046 5189991 879358..879636 1 NC_009513.1 hypothetical protein 879636 5189991 Lreu_0816 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271416.1 879358 D 557436 CDS YP_001271417.1 148544047 5189898 879633..879821 1 NC_009513.1 hypothetical protein 879821 5189898 Lreu_0817 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271417.1 879633 D 557436 CDS YP_001271418.1 148544048 5189829 879821..879973 1 NC_009513.1 hypothetical protein 879973 5189829 Lreu_0818 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271418.1 879821 D 557436 CDS YP_001271419.1 148544049 5189606 880017..880211 1 NC_009513.1 hypothetical protein 880211 5189606 Lreu_0819 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271419.1 880017 D 557436 CDS YP_001271420.1 148544050 5188854 880211..880471 1 NC_009513.1 hypothetical protein 880471 5188854 Lreu_0820 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271420.1 880211 D 557436 CDS YP_001271421.1 148544051 5189586 880471..880812 1 NC_009513.1 hypothetical protein 880812 5189586 Lreu_0821 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271421.1 880471 D 557436 CDS YP_001271422.1 148544052 5189974 880812..881000 1 NC_009513.1 hypothetical protein 881000 5189974 Lreu_0822 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271422.1 880812 D 557436 CDS YP_001271423.1 148544053 5188978 881008..881268 1 NC_009513.1 hypothetical protein 881268 5188978 Lreu_0823 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271423.1 881008 D 557436 CDS YP_001271424.1 148544054 5189982 881268..881579 1 NC_009513.1 hypothetical protein 881579 5189982 Lreu_0824 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271424.1 881268 D 557436 CDS YP_001271425.1 148544055 5189986 881554..881649 1 NC_009513.1 hypothetical protein 881649 5189986 Lreu_0825 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271425.1 881554 D 557436 CDS YP_001271426.1 148544056 5189847 881642..881785 1 NC_009513.1 hypothetical protein 881785 5189847 Lreu_0826 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271426.1 881642 D 557436 CDS YP_001271427.1 148544057 5189826 881867..882289 1 NC_009513.1 hypothetical protein 882289 5189826 Lreu_0827 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271427.1 881867 D 557436 CDS YP_001271428.1 148544058 5190137 883237..883443 1 NC_009513.1 hypothetical protein 883443 5190137 Lreu_0828 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271428.1 883237 D 557436 CDS YP_001271429.1 148544059 5189869 883531..884199 1 NC_009513.1 PFAM: phosphoadenosine phosphosulfate reductase; phosphoadenosine phosphosulfate reductase 884199 5189869 Lreu_0829 Lactobacillus reuteri DSM 20016 phosphoadenosine phosphosulfate reductase YP_001271429.1 883531 D 557436 CDS YP_001271430.1 148544060 5189562 884199..884624 1 NC_009513.1 hypothetical protein 884624 5189562 Lreu_0830 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271430.1 884199 D 557436 CDS YP_001271431.1 148544061 5189509 884638..885417 1 NC_009513.1 SMART: ParB domain protein nuclease; nuclease 885417 5189509 Lreu_0831 Lactobacillus reuteri DSM 20016 nuclease YP_001271431.1 884638 D 557436 CDS YP_001271432.1 148544062 5189600 885434..885937 1 NC_009513.1 hypothetical protein 885937 5189600 Lreu_0832 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271432.1 885434 D 557436 CDS YP_001271433.1 148544063 5190122 885912..887207 1 NC_009513.1 TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: phage terminase large subunit; protein of unknown function DUF1545; PBSX family phage terminase large subunit 887207 5190122 Lreu_0833 Lactobacillus reuteri DSM 20016 PBSX family phage terminase large subunit YP_001271433.1 885912 D 557436 CDS YP_001271434.1 148544064 5189838 887207..888868 1 NC_009513.1 TIGRFAM: phage portal protein, SPP1 family; PFAM: phage portal protein, SPP1; SPP1 family phage portal protein 888868 5189838 Lreu_0834 Lactobacillus reuteri DSM 20016 SPP1 family phage portal protein YP_001271434.1 887207 D 557436 CDS YP_001271435.1 148544065 5190070 888868..889818 1 NC_009513.1 TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; SPP1 family phage head morphogenesis protein 889818 5190070 Lreu_0835 Lactobacillus reuteri DSM 20016 SPP1 family phage head morphogenesis protein YP_001271435.1 888868 D 557436 CDS YP_001271436.1 148544066 5190161 889829..890074 1 NC_009513.1 hypothetical protein 890074 5190161 Lreu_0836 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271436.1 889829 D 557436 CDS YP_001271437.1 148544067 5189716 890204..890857 1 NC_009513.1 hypothetical protein 890857 5189716 Lreu_0837 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271437.1 890204 D 557436 CDS YP_001271438.1 148544068 5189905 890872..891948 1 NC_009513.1 hypothetical protein 891948 5189905 Lreu_0838 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271438.1 890872 D 557436 CDS YP_001271439.1 148544069 5189968 891961..892326 1 NC_009513.1 hypothetical protein 892326 5189968 Lreu_0839 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271439.1 891961 D 557436 CDS YP_001271440.1 148544070 5188960 892326..892640 1 NC_009513.1 hypothetical protein 892640 5188960 Lreu_0840 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271440.1 892326 D 557436 CDS YP_001271441.1 148544071 5190072 892630..893190 1 NC_009513.1 hypothetical protein 893190 5190072 Lreu_0841 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271441.1 892630 D 557436 CDS YP_001271442.1 148544072 5189918 893199..893609 1 NC_009513.1 hypothetical protein 893609 5189918 Lreu_0842 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271442.1 893199 D 557436 CDS YP_001271443.1 148544073 5190119 893612..894259 1 NC_009513.1 hypothetical protein 894259 5190119 Lreu_0843 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271443.1 893612 D 557436 CDS YP_001271444.1 148544074 5189166 894279..894824 1 NC_009513.1 hypothetical protein 894824 5189166 Lreu_0844 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271444.1 894279 D 557436 CDS YP_001271445.1 148544075 5190024 894917..895096 1 NC_009513.1 hypothetical protein 895096 5190024 Lreu_0845 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271445.1 894917 D 557436 CDS YP_001271446.1 148544076 5189966 895100..898750 1 NC_009513.1 PFAM: TMP repeat-containing protein; Lytic transglycosylase, catalytic; lytic transglycosylase 898750 5189966 Lreu_0846 Lactobacillus reuteri DSM 20016 lytic transglycosylase YP_001271446.1 895100 D 557436 CDS YP_001271447.1 148544077 5189336 898747..899634 1 NC_009513.1 PFAM: protein of unknown function DUF1306; hypothetical protein 899634 5189336 Lreu_0847 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271447.1 898747 D 557436 CDS YP_001271448.1 148544078 5188872 899631..901862 1 NC_009513.1 PFAM: peptidase M23B; peptidase M23B 901862 5188872 Lreu_0848 Lactobacillus reuteri DSM 20016 peptidase M23B YP_001271448.1 899631 D 557436 CDS YP_001271449.1 148544079 5190065 901846..905427 1 NC_009513.1 hypothetical protein 905427 5190065 Lreu_0849 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271449.1 901846 D 557436 CDS YP_001271450.1 148544080 5189882 905420..905692 1 NC_009513.1 hypothetical protein 905692 5189882 Lreu_0850 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271450.1 905420 D 557436 CDS YP_001271451.1 148544081 5189785 905735..906007 1 NC_009513.1 hypothetical protein 906007 5189785 Lreu_0851 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271451.1 905735 D 557436 CDS YP_001271452.1 148544082 5190111 906020..907165 1 NC_009513.1 PFAM: lipolytic protein, G-D-S-L family; GDSL family lipase 907165 5190111 Lreu_0852 Lactobacillus reuteri DSM 20016 GDSL family lipase YP_001271452.1 906020 D 557436 CDS YP_001271453.1 148544083 5189955 907168..908277 1 NC_009513.1 hypothetical protein 908277 5189955 Lreu_0853 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271453.1 907168 D 557436 CDS YP_001271454.1 148544084 5189736 908289..908693 1 NC_009513.1 hypothetical protein 908693 5189736 Lreu_0854 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271454.1 908289 D 557436 CDS YP_001271455.1 148544085 5189933 908686..908805 1 NC_009513.1 hypothetical protein 908805 5189933 Lreu_0855 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271455.1 908686 D 557436 CDS YP_001271456.1 148544086 5189895 908949..909395 1 NC_009513.1 hypothetical protein 909395 5189895 Lreu_0856 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271456.1 908949 D 557436 CDS YP_001271457.1 148544087 5190162 909434..910603 1 NC_009513.1 hypothetical protein 910603 5190162 Lreu_0857 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271457.1 909434 D 557436 CDS YP_001271458.1 148544088 5189855 910618..911067 1 NC_009513.1 TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin, toxin secretion/phage lysis; toxin secretion/phage lysis holin 911067 5189855 Lreu_0858 Lactobacillus reuteri DSM 20016 toxin secretion/phage lysis holin YP_001271458.1 910618 D 557436 CDS YP_001271459.1 148544089 5189637 911057..912256 1 NC_009513.1 PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramoyl-L-alanine amidase 912256 5189637 Lreu_0859 Lactobacillus reuteri DSM 20016 N-acetylmuramoyl-L-alanine amidase YP_001271459.1 911057 D 557436 CDS YP_001271460.1 148544090 5189920 complement(912328..912495) 1 NC_009513.1 hypothetical protein 912495 5189920 Lreu_0860 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271460.1 912328 R 557436 CDS YP_001271461.1 148544091 5190101 complement(912508..914037) 1 NC_009513.1 PFAM: carbohydrate kinase, FGGY; carbohydrate kinase FGGY 914037 5190101 Lreu_0861 Lactobacillus reuteri DSM 20016 carbohydrate kinase FGGY YP_001271461.1 912508 R 557436 CDS YP_001271462.1 148544092 5189786 914265..914798 1 NC_009513.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 914798 5189786 Lreu_0862 Lactobacillus reuteri DSM 20016 N-acetyltransferase GCN5 YP_001271462.1 914265 D 557436 CDS YP_001271463.1 148544093 5189627 complement(914845..915111) 1 NC_009513.1 hypothetical protein 915111 5189627 Lreu_0863 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271463.1 914845 R 557436 CDS YP_001271464.1 148544094 5189462 complement(915306..915515) 1 NC_009513.1 hypothetical protein 915515 5189462 Lreu_0864 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271464.1 915306 R 557436 CDS YP_001271465.1 148544095 5189799 915813..915935 1 NC_009513.1 hypothetical protein 915935 5189799 Lreu_0865 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271465.1 915813 D 557436 CDS YP_001271466.1 148544096 5190053 916309..918222 1 NC_009513.1 TIGRFAM: LPXTG-motif cell wall anchor domain; PFAM: Amidase; surface protein from Gram-positive cocci, anchor region; cell wall anchor domain-containing protein 918222 5190053 Lreu_0866 Lactobacillus reuteri DSM 20016 cell wall anchor domain-containing protein YP_001271466.1 916309 D 557436 CDS YP_001271467.1 148544097 5189854 918304..918579 1 NC_009513.1 hypothetical protein 918579 5189854 Lreu_0867 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271467.1 918304 D 557436 CDS YP_001271468.1 148544098 5189959 complement(918640..919131) 1 NC_009513.1 PFAM: protein of unknown function DUF805; hypothetical protein 919131 5189959 Lreu_0868 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271468.1 918640 R 557436 CDS YP_001271469.1 148544099 5189901 919441..920973 1 NC_009513.1 PFAM: N-6 DNA methylase; N-6 DNA methylase 920973 5189901 Lreu_0869 Lactobacillus reuteri DSM 20016 N-6 DNA methylase YP_001271469.1 919441 D 557436 CDS YP_001271470.1 148544100 5190131 920963..921550 1 NC_009513.1 PFAM: restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit 921550 5190131 Lreu_0870 Lactobacillus reuteri DSM 20016 restriction modification system DNA specificity subunit YP_001271470.1 920963 D 557436 CDS YP_001271471.1 148544101 5189792 complement(921471..922106) 1 NC_009513.1 PFAM: restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit 922106 5189792 Lreu_0871 Lactobacillus reuteri DSM 20016 restriction modification system DNA specificity subunit YP_001271471.1 921471 R 557436 CDS YP_001271472.1 148544102 5190073 922149..923123 1 NC_009513.1 PFAM: phage integrase family protein; phage integrase family protein 923123 5190073 Lreu_0872 Lactobacillus reuteri DSM 20016 phage integrase family protein YP_001271472.1 922149 D 557436 CDS YP_001271473.1 148544103 5189767 923128..924255 1 NC_009513.1 PFAM: restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit 924255 5189767 Lreu_0873 Lactobacillus reuteri DSM 20016 restriction modification system DNA specificity subunit YP_001271473.1 923128 D 557436 CDS YP_001271474.1 148544104 5189857 924309..927434 1 NC_009513.1 TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; HsdR family type I site-specific deoxyribonuclease 927434 5189857 Lreu_0874 Lactobacillus reuteri DSM 20016 HsdR family type I site-specific deoxyribonuclease YP_001271474.1 924309 D 557436 CDS YP_001271475.1 148544105 5189715 complement(927491..927751) 1 NC_009513.1 XRE family plasmid maintenance system antidote protein 927751 5189715 Lreu_0875 Lactobacillus reuteri DSM 20016 XRE family plasmid maintenance system antidote protein YP_001271475.1 927491 R 557436 CDS YP_001271476.1 148544106 5189995 928086..930353 1 NC_009513.1 hypothetical protein 930353 5189995 Lreu_0876 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271476.1 928086 D 557436 CDS YP_001271477.1 148544107 5190138 930805..931749 1 NC_009513.1 Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively; pyrimidine-specific; ribonucleoside hydrolase 1 931749 rihA 5190138 rihA Lactobacillus reuteri DSM 20016 ribonucleoside hydrolase 1 YP_001271477.1 930805 D 557436 CDS YP_001271478.1 148544108 5188959 932095..933153 1 NC_009513.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase 933153 5188959 Lreu_0878 Lactobacillus reuteri DSM 20016 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase YP_001271478.1 932095 D 557436 CDS YP_001271479.1 148544109 5190018 933146..933748 1 NC_009513.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 933748 5190018 Lreu_0879 Lactobacillus reuteri DSM 20016 riboflavin synthase subunit alpha YP_001271479.1 933146 D 557436 CDS YP_001271480.1 148544110 5189150 933748..934929 1 NC_009513.1 PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; GTP cyclohydrolase II 934929 5189150 Lreu_0880 Lactobacillus reuteri DSM 20016 GTP cyclohydrolase II YP_001271480.1 933748 D 557436 CDS YP_001271481.1 148544111 5188796 934932..935390 1 NC_009513.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 935390 ribH 5188796 ribH Lactobacillus reuteri DSM 20016 6,7-dimethyl-8-ribityllumazine synthase YP_001271481.1 934932 D 557436 CDS YP_001271482.1 148544112 5189769 complement(935436..936161) 1 NC_009513.1 PFAM: Ion transport protein; Ion transport 2 domain protein; Ion transport 2 domain-containing protein 936161 5189769 Lreu_0882 Lactobacillus reuteri DSM 20016 Ion transport 2 domain-containing protein YP_001271482.1 935436 R 557436 CDS YP_001271483.1 148544113 5189727 complement(936234..939122) 1 NC_009513.1 hypothetical protein 939122 5189727 Lreu_0883 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271483.1 936234 R 557436 CDS YP_001271484.1 148544114 5190134 939291..940475 1 NC_009513.1 PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter 940475 5190134 Lreu_0884 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001271484.1 939291 D 557436 CDS YP_001271485.1 148544115 5189726 complement(940542..941117) 1 NC_009513.1 TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 factor 941117 5189726 Lreu_0885 Lactobacillus reuteri DSM 20016 ECF subfamily RNA polymerase sigma-24 factor YP_001271485.1 940542 R 557436 CDS YP_001271486.1 148544116 5189444 complement(941465..941839) 1 NC_009513.1 PFAM: thioesterase superfamily protein; thioesterase superfamily protein 941839 5189444 Lreu_0886 Lactobacillus reuteri DSM 20016 thioesterase superfamily protein YP_001271486.1 941465 R 557436 CDS YP_001271487.1 148544117 5189151 941873..942694 1 NC_009513.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 942694 5189151 Lreu_0887 Lactobacillus reuteri DSM 20016 naphthoate synthase YP_001271487.1 941873 D 557436 CDS YP_001271488.1 148544118 5189709 942710..944131 1 NC_009513.1 TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; o-succinylbenzoate--CoA ligase 944131 5189709 Lreu_0888 Lactobacillus reuteri DSM 20016 o-succinylbenzoate--CoA ligase YP_001271488.1 942710 D 557436 CDS YP_001271489.1 148544119 5189714 complement(944197..944355) 1 NC_009513.1 hypothetical protein 944355 5189714 Lreu_0889 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271489.1 944197 R 557436 CDS YP_001271490.1 148544120 5190125 complement(944362..946416) 1 NC_009513.1 TIGRFAM: ferrous iron transport protein B; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; ferrous iron transport protein B 946416 5190125 Lreu_0890 Lactobacillus reuteri DSM 20016 ferrous iron transport protein B YP_001271490.1 944362 R 557436 CDS YP_001271491.1 148544121 5189394 946785..947582 1 NC_009513.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; FeS assembly ATPase SufC 947582 5189394 Lreu_0891 Lactobacillus reuteri DSM 20016 FeS assembly ATPase SufC YP_001271491.1 946785 D 557436 CDS YP_001271492.1 148544122 5189703 947594..948883 1 NC_009513.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; FeS assembly protein SufD 948883 5189703 Lreu_0892 Lactobacillus reuteri DSM 20016 FeS assembly protein SufD YP_001271492.1 947594 D 557436 CDS YP_001271493.1 148544123 5190081 948864..950102 1 NC_009513.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; SufS subfamily cysteine desulfurase 950102 5190081 Lreu_0893 Lactobacillus reuteri DSM 20016 SufS subfamily cysteine desulfurase YP_001271493.1 948864 D 557436 CDS YP_001271494.1 148544124 5190133 950089..950550 1 NC_009513.1 TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; NifU family SUF system FeS assembly protein 950550 5190133 Lreu_0894 Lactobacillus reuteri DSM 20016 NifU family SUF system FeS assembly protein YP_001271494.1 950089 D 557436 CDS YP_001271495.1 148544125 5190088 950543..951952 1 NC_009513.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; FeS assembly protein SufB 951952 5190088 Lreu_0895 Lactobacillus reuteri DSM 20016 FeS assembly protein SufB YP_001271495.1 950543 D 557436 CDS YP_001271496.1 148544126 5190090 951985..952317 1 NC_009513.1 PFAM: protein of unknown function DUF59; hypothetical protein 952317 5190090 Lreu_0896 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271496.1 951985 D 557436 CDS YP_001271497.1 148544127 5189377 952334..953224 1 NC_009513.1 PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 953224 5189377 Lreu_0897 Lactobacillus reuteri DSM 20016 helix-turn-helix domain-containing protein YP_001271497.1 952334 D 557436 CDS YP_001271498.1 148544128 5189980 complement(953276..953929) 1 NC_009513.1 PFAM: regulatory protein, LuxR; response regulator receiver; two component LuxR family transcriptional regulator 953929 5189980 Lreu_0898 Lactobacillus reuteri DSM 20016 two component LuxR family transcriptional regulator YP_001271498.1 953276 R 557436 CDS YP_001271499.1 148544129 5190100 954415..954651 1 NC_009513.1 PFAM: cytochrome b5; cytochrome b5 954651 5190100 Lreu_0899 Lactobacillus reuteri DSM 20016 cytochrome b5 YP_001271499.1 954415 D 557436 CDS YP_001271500.1 148544130 5189379 complement(954709..955521) 1 NC_009513.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; cof family hydrolase 955521 5189379 Lreu_0900 Lactobacillus reuteri DSM 20016 cof family hydrolase YP_001271500.1 954709 R 557436 CDS YP_001271501.1 148544131 5189412 955666..957033 1 NC_009513.1 PFAM: Fmu (Sun) domain protein; Fmu (Sun) domain-containing protein 957033 5189412 Lreu_0901 Lactobacillus reuteri DSM 20016 Fmu (Sun) domain-containing protein YP_001271501.1 955666 D 557436 CDS YP_001271502.1 148544132 5190062 957052..957918 1 NC_009513.1 PFAM: band 7 protein; hypothetical protein 957918 5190062 Lreu_0902 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271502.1 957052 D 557436 CDS YP_001271503.1 148544133 5190042 957919..959682 1 NC_009513.1 PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type, transmembrane region; signal transduction histidine kinase LytS 959682 5190042 Lreu_0903 Lactobacillus reuteri DSM 20016 signal transduction histidine kinase LytS YP_001271503.1 957919 D 557436 CDS YP_001271504.1 148544134 5190153 959663..960394 1 NC_009513.1 PFAM: response regulator receiver; LytTr DNA-binding region; LytTR family two component transcriptional regulator 960394 5190153 Lreu_0904 Lactobacillus reuteri DSM 20016 LytTR family two component transcriptional regulator YP_001271504.1 959663 D 557436 CDS YP_001271505.1 148544135 5190020 960599..961018 1 NC_009513.1 PFAM: LrgA family protein; LrgA family protein 961018 5190020 Lreu_0905 Lactobacillus reuteri DSM 20016 LrgA family protein YP_001271505.1 960599 D 557436 CDS YP_001271506.1 148544136 5190017 961011..961751 1 NC_009513.1 PFAM: LrgB family protein; LrgB family protein 961751 5190017 Lreu_0906 Lactobacillus reuteri DSM 20016 LrgB family protein YP_001271506.1 961011 D 557436 CDS YP_001271507.1 148544137 5190120 961779..962753 1 NC_009513.1 TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; malate dehydrogenase (NAD) 962753 5190120 Lreu_0907 Lactobacillus reuteri DSM 20016 malate dehydrogenase (NAD) YP_001271507.1 961779 D 557436 CDS YP_001271508.1 148544138 5189049 complement(963810..964829) 1 NC_009513.1 PFAM: regulatory protein, LacI; LacI family transcriptional regulator 964829 5189049 Lreu_0909 Lactobacillus reuteri DSM 20016 LacI family transcriptional regulator YP_001271508.1 963810 R 557436 CDS YP_001271509.1 148544139 5189038 964993..967182 1 NC_009513.1 PFAM: glycoside hydrolase, clan GH-D; glycoside hydrolase 967182 5189038 Lreu_0910 Lactobacillus reuteri DSM 20016 glycoside hydrolase YP_001271509.1 964993 D 557436 CDS YP_001271510.1 148544140 5188695 complement(967358..967858) 1 NC_009513.1 PFAM: protein of unknown function DUF1440; hypothetical protein 967858 5188695 Lreu_0911 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271510.1 967358 R 557436 CDS YP_001271511.1 148544141 5188589 complement(967919..968965) 1 NC_009513.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase 968965 5188589 Lreu_0912 Lactobacillus reuteri DSM 20016 isopentenyl pyrophosphate isomerase YP_001271511.1 967919 R 557436 CDS YP_001271512.1 148544142 5189572 complement(968981..970108) 1 NC_009513.1 TIGRFAM: phosphomevalonate kinase; PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; phosphomevalonate kinase 970108 5189572 Lreu_0913 Lactobacillus reuteri DSM 20016 phosphomevalonate kinase YP_001271512.1 968981 R 557436 CDS YP_001271513.1 148544143 5189963 complement(970136..971107) 1 NC_009513.1 TIGRFAM: diphosphomevalonate decarboxylase; PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; diphosphomevalonate decarboxylase 971107 5189963 Lreu_0914 Lactobacillus reuteri DSM 20016 diphosphomevalonate decarboxylase YP_001271513.1 970136 R 557436 CDS YP_001271514.1 148544144 5188481 complement(971107..972057) 1 NC_009513.1 TIGRFAM: mevalonate kinase; PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; mevalonate kinase 972057 5188481 Lreu_0915 Lactobacillus reuteri DSM 20016 mevalonate kinase YP_001271514.1 971107 R 557436 CDS YP_001271515.1 148544145 5188474 972273..975137 1 NC_009513.1 TIGRFAM: DNA polymerase III, epsilon subunit; DnaQ family exonuclease/DinG family helicase, putative; PFAM: helicase domain protein; Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; helicase c2; DEAD-like helicases-like; DnaQ family exonuclease/DinG family helicase 975137 5188474 Lreu_0916 Lactobacillus reuteri DSM 20016 DnaQ family exonuclease/DinG family helicase YP_001271515.1 972273 D 557436 CDS YP_001271516.1 148544146 5188396 975231..975749 1 NC_009513.1 hypothetical protein 975749 5188396 Lreu_0917 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271516.1 975231 D 557436 CDS YP_001271517.1 148544147 5188581 975833..976537 1 NC_009513.1 TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; DNA replication protein DnaD 976537 5188581 Lreu_0918 Lactobacillus reuteri DSM 20016 DNA replication protein DnaD YP_001271517.1 975833 D 557436 CDS YP_001271518.1 148544148 5189353 976560..977477 1 NC_009513.1 PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 977477 5189353 Lreu_0919 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271518.1 976560 D 557436 CDS YP_001271519.1 148544149 5188267 complement(977554..979818) 1 NC_009513.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; 1A family penicillin-binding protein 979818 5188267 Lreu_0920 Lactobacillus reuteri DSM 20016 1A family penicillin-binding protein YP_001271519.1 977554 R 557436 CDS YP_001271520.1 148544150 5189667 complement(979830..980444) 1 NC_009513.1 functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC; Holliday junction-specific endonuclease 980444 recU 5189667 recU Lactobacillus reuteri DSM 20016 Holliday junction-specific endonuclease YP_001271520.1 979830 R 557436 CDS YP_001271521.1 148544151 5189284 980563..981135 1 NC_009513.1 PFAM: protein of unknown function DUF1273; hypothetical protein 981135 5189284 Lreu_0922 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271521.1 980563 D 557436 CDS YP_001271522.1 148544152 5189066 981207..981569 1 NC_009513.1 GpsB; guiding PBP1 shuttling; similar to DivIVA; cell division protein GpsB 981569 5189066 Lreu_0923 Lactobacillus reuteri DSM 20016 cell division protein GpsB YP_001271522.1 981207 D 557436 CDS YP_001271523.1 148544153 5188362 982281..982757 1 NC_009513.1 PFAM: NrdI family protein; NrdI family protein 982757 5188362 Lreu_0924 Lactobacillus reuteri DSM 20016 NrdI family protein YP_001271523.1 982281 D 557436 CDS YP_001271524.1 148544154 5188672 982908..984104 1 NC_009513.1 PFAM: RNA methylase; RNA methylase 984104 5188672 Lreu_0925 Lactobacillus reuteri DSM 20016 RNA methylase YP_001271524.1 982908 D 557436 CDS YP_001271525.1 148544155 5188402 complement(984238..984633) 1 NC_009513.1 RNase HI 984633 5188402 Lreu_0926 Lactobacillus reuteri DSM 20016 RNase HI YP_001271525.1 984238 R 557436 CDS YP_001271526.1 148544156 5188618 984658..985065 1 NC_009513.1 hypothetical protein 985065 5188618 Lreu_0927 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271526.1 984658 D 557436 CDS YP_001271527.1 148544157 5188518 985066..985512 1 NC_009513.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 985512 5188518 Lreu_0928 Lactobacillus reuteri DSM 20016 lipoprotein signal peptidase YP_001271527.1 985066 D 557436 CDS YP_001271528.1 148544158 5188943 985516..986427 1 NC_009513.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; ribosomal large subunit pseudouridine synthase D 986427 5188943 Lreu_0929 Lactobacillus reuteri DSM 20016 ribosomal large subunit pseudouridine synthase D YP_001271528.1 985516 D 557436 CDS YP_001271529.1 148544159 5188590 986504..987589 1 NC_009513.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 987589 5188590 Lreu_0930 Lactobacillus reuteri DSM 20016 carbamoyl phosphate synthase small subunit YP_001271529.1 986504 D 557436 CDS YP_001271530.1 148544160 5188469 987589..990063 1 NC_009513.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain, oligomerisation; carbamoyl-phosphate synthase 990063 5188469 Lreu_0931 Lactobacillus reuteri DSM 20016 carbamoyl-phosphate synthase YP_001271530.1 987589 D 557436 CDS YP_001271531.1 148544161 5188184 complement(990232..991914) 1 NC_009513.1 PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; fibronectin-binding A domain-containing protein 991914 5188184 Lreu_0932 Lactobacillus reuteri DSM 20016 fibronectin-binding A domain-containing protein YP_001271531.1 990232 R 557436 CDS YP_001271532.1 148544162 5188555 992131..993009 1 NC_009513.1 TIGRFAM: degV family protein; PFAM: DegV family protein; degV family protein 993009 5188555 Lreu_0933 Lactobacillus reuteri DSM 20016 degV family protein YP_001271532.1 992131 D 557436 CDS YP_001271533.1 148544163 5188504 993060..993650 1 NC_009513.1 hypothetical protein 993650 5188504 Lreu_0934 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271533.1 993060 D 557436 CDS YP_001271534.1 148544164 5188203 complement(993714..994370) 1 NC_009513.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; metal dependent phosphohydrolase 994370 5188203 Lreu_0935 Lactobacillus reuteri DSM 20016 metal dependent phosphohydrolase YP_001271534.1 993714 R 557436 CDS YP_001271535.1 148544165 5188413 994469..995317 1 NC_009513.1 PFAM: glycosyl transferase, family 8; glycosyl transferase family protein 995317 5188413 Lreu_0936 Lactobacillus reuteri DSM 20016 glycosyl transferase family protein YP_001271535.1 994469 D 557436 CDS YP_001271536.1 148544166 5188246 complement(995291..996136) 1 NC_009513.1 PFAM: hydrolase family protein; hydrolase family protein 996136 5188246 Lreu_0937 Lactobacillus reuteri DSM 20016 hydrolase family protein YP_001271536.1 995291 R 557436 CDS YP_001271537.1 148544167 5188303 996296..996820 1 NC_009513.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 996820 5188303 Lreu_0938 Lactobacillus reuteri DSM 20016 N-acetyltransferase GCN5 YP_001271537.1 996296 D 557436 CDS YP_001271538.1 148544168 5188521 complement(996908..998290) 1 NC_009513.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 998290 5188521 Lreu_0939 Lactobacillus reuteri DSM 20016 RNA-directed DNA polymerase YP_001271538.1 996908 R 557436 CDS YP_001271539.1 148544169 5188398 complement(998785..1000128) 1 NC_009513.1 PFAM: protein of unknown function DUF711; hypothetical protein 1000128 5188398 Lreu_0940 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271539.1 998785 R 557436 CDS YP_001271540.1 148544170 5188406 complement(1000153..1000419) 1 NC_009513.1 PFAM: amino acid-binding ACT domain protein; ACT domain-containing protein 1000419 5188406 Lreu_0941 Lactobacillus reuteri DSM 20016 ACT domain-containing protein YP_001271540.1 1000153 R 557436 CDS YP_001271541.1 148544171 5188323 complement(1000680..1001582) 1 NC_009513.1 PFAM: aldo/keto reductase; 2,5-didehydrogluconate reductase 1001582 5188323 Lreu_0942 Lactobacillus reuteri DSM 20016 2,5-didehydrogluconate reductase YP_001271541.1 1000680 R 557436 CDS YP_001271542.1 148544172 5188543 complement(1001628..1002512) 1 NC_009513.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator 1002512 5188543 Lreu_0943 Lactobacillus reuteri DSM 20016 LysR family transcriptional regulator YP_001271542.1 1001628 R 557436 CDS YP_001271543.1 148544173 5188527 1002555..1003031 1 NC_009513.1 hypothetical protein 1003031 5188527 Lreu_0944 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271543.1 1002555 D 557436 CDS YP_001271544.1 148544174 5188454 1003126..1003461 1 NC_009513.1 hypothetical protein 1003461 5188454 Lreu_0945 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271544.1 1003126 D 557436 CDS YP_001271545.1 148544175 5188385 1003617..1004072 1 NC_009513.1 PFAM: protein of unknown function DUF441; hypothetical protein 1004072 5188385 Lreu_0946 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271545.1 1003617 D 557436 CDS YP_001271546.1 148544176 5188230 complement(1004122..1005510) 1 NC_009513.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA family drug resistance transporter 1005510 5188230 Lreu_0947 Lactobacillus reuteri DSM 20016 EmrB/QacA family drug resistance transporter YP_001271546.1 1004122 R 557436 CDS YP_001271547.1 148544177 5188611 1005665..1006093 1 NC_009513.1 TIGRFAM: Copper transport repressor CopY/TcrY; PFAM: Penicillinase repressor; CopY family transcriptional regulator 1006093 5188611 Lreu_0948 Lactobacillus reuteri DSM 20016 CopY family transcriptional regulator YP_001271547.1 1005665 D 557436 CDS YP_001271548.1 148544178 5188410 complement(1006153..1007514) 1 NC_009513.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; hypothetical protein 1007514 5188410 Lreu_0949 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271548.1 1006153 R 557436 CDS YP_001271549.1 148544179 5188441 1007654..1009390 1 NC_009513.1 PFAM: ABC-1 domain protein; 2-octaprenylphenol hydroxylase 1009390 5188441 Lreu_0950 Lactobacillus reuteri DSM 20016 2-octaprenylphenol hydroxylase YP_001271549.1 1007654 D 557436 CDS YP_001271550.1 148544180 5188388 1009394..1010209 1 NC_009513.1 PFAM: protein of unknown function DUF218; hypothetical protein 1010209 5188388 Lreu_0951 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271550.1 1009394 D 557436 CDS YP_001271551.1 148544181 5188479 complement(1010261..1010653) 1 NC_009513.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1010653 5188479 Lreu_0952 Lactobacillus reuteri DSM 20016 glyoxalase/bleomycin resistance protein/dioxygenase YP_001271551.1 1010261 R 557436 CDS YP_001271552.1 148544182 5188456 1010761..1011138 1 NC_009513.1 PFAM: Camphor resistance CrcB protein; camphor resistance protein CrcB 1011138 5188456 Lreu_0953 Lactobacillus reuteri DSM 20016 camphor resistance protein CrcB YP_001271552.1 1010761 D 557436 CDS YP_001271553.1 148544183 5188476 1011131..1011469 1 NC_009513.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; camphor resistance protein CrcB 1011469 5188476 Lreu_0954 Lactobacillus reuteri DSM 20016 camphor resistance protein CrcB YP_001271553.1 1011131 D 557436 CDS YP_001271554.1 148544184 5188647 1011485..1013998 1 NC_009513.1 PFAM: ABC transporter related; ABC transporter-like protien 1013998 5188647 Lreu_0955 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001271554.1 1011485 D 557436 CDS YP_001271555.1 148544185 5188182 complement(1014062..1014754) 1 NC_009513.1 PFAM: SNARE associated Golgi protein; hypothetical protein 1014754 5188182 Lreu_0956 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271555.1 1014062 R 557436 CDS YP_001271556.1 148544186 5188524 complement(1014757..1016007) 1 NC_009513.1 hypothetical protein 1016007 5188524 Lreu_0957 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271556.1 1014757 R 557436 CDS YP_001271557.1 148544187 5188530 1016175..1017950 1 NC_009513.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1017950 5188530 Lreu_0958 Lactobacillus reuteri DSM 20016 1-deoxy-D-xylulose-5-phosphate synthase YP_001271557.1 1016175 D 557436 CDS YP_001271558.1 148544188 5188266 1017990..1018895 1 NC_009513.1 TIGRFAM: LPXTG-motif cell wall anchor domain; cell wall anchor domain-containing protein 1018895 5188266 Lreu_0959 Lactobacillus reuteri DSM 20016 cell wall anchor domain-containing protein YP_001271558.1 1017990 D 557436 CDS YP_001271559.1 148544189 5188567 1019181..1020572 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 1020572 5188567 Lreu_0960 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001271559.1 1019181 D 557436 CDS YP_001271560.1 148544190 5188668 1020682..1021536 1 NC_009513.1 PFAM: DNA/RNA non-specific endonuclease; DNA/RNA non-specific endonuclease 1021536 5188668 Lreu_0961 Lactobacillus reuteri DSM 20016 DNA/RNA non-specific endonuclease YP_001271560.1 1020682 D 557436 CDS YP_001271561.1 148544191 5188546 1021715..1024039 1 NC_009513.1 hypothetical protein 1024039 5188546 Lreu_0962 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271561.1 1021715 D 557436 CDS YP_001271562.1 148544192 5188538 complement(1024123..1025505) 1 NC_009513.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 1025505 5188538 Lreu_0963 Lactobacillus reuteri DSM 20016 RNA-directed DNA polymerase YP_001271562.1 1024123 R 557436 CDS YP_001271563.1 148544193 5188609 complement(1025990..1026259) 1 NC_009513.1 hypothetical protein 1026259 5188609 Lreu_0964 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271563.1 1025990 R 557436 CDS YP_001271564.1 148544194 5188370 1026376..1026621 1 NC_009513.1 hypothetical protein 1026621 5188370 Lreu_0965 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271564.1 1026376 D 557436 CDS YP_001271565.1 148544195 5188252 1026618..1026818 1 NC_009513.1 hypothetical protein 1026818 5188252 Lreu_0966 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271565.1 1026618 D 557436 CDS YP_001271566.1 148544196 5188349 1026828..1027466 1 NC_009513.1 PFAM: protein of unknown function DUF421; hypothetical protein 1027466 5188349 Lreu_0967 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271566.1 1026828 D 557436 CDS YP_001271567.1 148544197 5188409 1027542..1028405 1 NC_009513.1 PFAM: hydrolase family protein; hydrolase family protein 1028405 5188409 Lreu_0968 Lactobacillus reuteri DSM 20016 hydrolase family protein YP_001271567.1 1027542 D 557436 CDS YP_001271568.1 148544198 5188157 1028407..1028562 1 NC_009513.1 hypothetical protein 1028562 5188157 Lreu_0969 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271568.1 1028407 D 557436 CDS YP_001271569.1 148544199 5188639 1028638..1029120 1 NC_009513.1 PFAM: nucleoside 2-deoxyribosyltransferase; nucleotide deoxyribosyltransferase 1029120 5188639 Lreu_0970 Lactobacillus reuteri DSM 20016 nucleotide deoxyribosyltransferase YP_001271569.1 1028638 D 557436 CDS YP_001271570.1 148544200 5189042 complement(1029165..1030001) 1 NC_009513.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; HAD family hydrolase 1030001 5189042 Lreu_0971 Lactobacillus reuteri DSM 20016 HAD family hydrolase YP_001271570.1 1029165 R 557436 CDS YP_001271571.1 148544201 5188684 complement(1030022..1030384) 1 NC_009513.1 hypothetical protein 1030384 5188684 Lreu_0972 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271571.1 1030022 R 557436 CDS YP_001271572.1 148544202 5188642 complement(1030770..1031057) 1 NC_009513.1 hypothetical protein 1031057 5188642 Lreu_0973 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271572.1 1030770 R 557436 CDS YP_001271573.1 148544203 5189231 1032334..1032477 1 NC_009513.1 hypothetical protein 1032477 5189231 Lreu_0975 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271573.1 1032334 D 557436 CDS YP_001271574.1 148544204 5189215 1032474..1032605 1 NC_009513.1 hypothetical protein 1032605 5189215 Lreu_0976 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271574.1 1032474 D 557436 CDS YP_001271575.1 148544205 5189298 1032872..1033330 1 NC_009513.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 1033330 5189298 Lreu_0977 Lactobacillus reuteri DSM 20016 transposase IS200-family protein YP_001271575.1 1032872 D 557436 CDS YP_001271576.1 148544206 5188706 complement(1033558..1034496) 1 NC_009513.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase domain-containing protein 1034496 5188706 Lreu_0978 Lactobacillus reuteri DSM 20016 alpha/beta hydrolase domain-containing protein YP_001271576.1 1033558 R 557436 CDS YP_001271577.1 148544207 5189179 1034721..1035368 1 NC_009513.1 PFAM: DSBA oxidoreductase; DSBA oxidoreductase 1035368 5189179 Lreu_0979 Lactobacillus reuteri DSM 20016 DSBA oxidoreductase YP_001271577.1 1034721 D 557436 CDS YP_001271578.1 148544208 5189132 1035501..1035854 1 NC_009513.1 hypothetical protein 1035854 5189132 Lreu_0980 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271578.1 1035501 D 557436 CDS YP_001271579.1 148544209 5189191 complement(1037039..1037803) 1 NC_009513.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 1037803 5189191 Lreu_0981 Lactobacillus reuteri DSM 20016 enoyl-ACP reductase YP_001271579.1 1037039 R 557436 CDS YP_001271580.1 148544210 5189305 complement(1037814..1038590) 1 NC_009513.1 PFAM: acetyl-CoA carboxylase, alpha subunit; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 1038590 5189305 Lreu_0982 Lactobacillus reuteri DSM 20016 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha YP_001271580.1 1037814 R 557436 CDS YP_001271581.1 148544211 5189116 complement(1038583..1039347) 1 NC_009513.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 1039347 5189116 Lreu_0983 Lactobacillus reuteri DSM 20016 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha YP_001271581.1 1038583 R 557436 CDS YP_001271582.1 148544212 5189296 complement(1039428..1040798) 1 NC_009513.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; acetyl-CoA carboxylase, biotin carboxylase 1040798 5189296 Lreu_0984 Lactobacillus reuteri DSM 20016 acetyl-CoA carboxylase, biotin carboxylase YP_001271582.1 1039428 R 557436 CDS YP_001271583.1 148544213 5189041 complement(1040807..1041241) 1 NC_009513.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1041241 fabZ 5189041 fabZ Lactobacillus reuteri DSM 20016 (3R)-hydroxymyristoyl-ACP dehydratase YP_001271583.1 1040807 R 557436 CDS YP_001271584.1 148544214 5189290 complement(1041234..1041686) 1 NC_009513.1 PFAM: biotin/lipoyl attachment domain-containing protein; biotin carboxyl carrier protein 1041686 5189290 Lreu_0986 Lactobacillus reuteri DSM 20016 biotin carboxyl carrier protein YP_001271584.1 1041234 R 557436 CDS YP_001271585.1 148544215 5189168 complement(1041693..1042925) 1 NC_009513.1 PFAM: Beta-ketoacyl synthase-like; 3-oxoacyl-ACP synthase 1042925 5189168 Lreu_0987 Lactobacillus reuteri DSM 20016 3-oxoacyl-ACP synthase YP_001271585.1 1041693 R 557436 CDS YP_001271586.1 148544216 5188681 complement(1042936..1043670) 1 NC_009513.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 1043670 5188681 Lreu_0988 Lactobacillus reuteri DSM 20016 short-chain dehydrogenase/reductase SDR YP_001271586.1 1042936 R 557436 CDS YP_001271587.1 148544217 5188697 complement(1043654..1044541) 1 NC_009513.1 (acyl-carrier-protein) S-malonyltransferase-like protein 1044541 5188697 Lreu_0989 Lactobacillus reuteri DSM 20016 (acyl-carrier-protein) S-malonyltransferase-like protein YP_001271587.1 1043654 R 557436 CDS YP_001271588.1 148544218 5189172 complement(1044604..1044852) 1 NC_009513.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1044852 acpP 5189172 acpP Lactobacillus reuteri DSM 20016 acyl carrier protein YP_001271588.1 1044604 R 557436 CDS YP_001271589.1 148544219 5189070 complement(1044866..1045840) 1 NC_009513.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-ACP synthase 1045840 5189070 Lreu_0991 Lactobacillus reuteri DSM 20016 3-oxoacyl-ACP synthase YP_001271589.1 1044866 R 557436 CDS YP_001271590.1 148544220 5188662 complement(1045860..1046306) 1 NC_009513.1 PFAM: regulatory protein, MarR; MarR family transcriptional regulator 1046306 5188662 Lreu_0992 Lactobacillus reuteri DSM 20016 MarR family transcriptional regulator YP_001271590.1 1045860 R 557436 CDS YP_001271591.1 148544221 5189114 complement(1046393..1046839) 1 NC_009513.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; beta-hydroxyacyl-(ACP) dehydratase FabZ 1046839 5189114 Lreu_0993 Lactobacillus reuteri DSM 20016 beta-hydroxyacyl-(ACP) dehydratase FabZ YP_001271591.1 1046393 R 557436 CDS YP_001271592.1 148544222 5188215 1047164..1048243 1 NC_009513.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerS; site-specific tyrosine recombinase XerS 1048243 xerS 5188215 xerS Lactobacillus reuteri DSM 20016 site-specific tyrosine recombinase XerS YP_001271592.1 1047164 D 557436 CDS YP_001271593.1 148544223 5189253 complement(1048597..1049208) 1 NC_009513.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 1049208 5189253 Lreu_0995 Lactobacillus reuteri DSM 20016 integrase catalytic subunit YP_001271593.1 1048597 R 557436 CDS YP_001271594.1 148544224 5189065 complement(1049298..1049972) 1 NC_009513.1 hypothetical protein 1049972 5189065 Lreu_0996 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271594.1 1049298 R 557436 CDS YP_001271595.1 148544225 5189324 1050399..1051253 1 NC_009513.1 PFAM: Patatin; patatin 1051253 5189324 Lreu_0997 Lactobacillus reuteri DSM 20016 patatin YP_001271595.1 1050399 D 557436 CDS YP_001271596.1 148544226 5189170 1051270..1051917 1 NC_009513.1 PFAM: phage integrase family protein; phage integrase family protein 1051917 5189170 Lreu_0998 Lactobacillus reuteri DSM 20016 phage integrase family protein YP_001271596.1 1051270 D 557436 CDS YP_001271597.1 148544227 5188321 1052026..1052916 1 NC_009513.1 PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 1052916 5188321 Lreu_0999 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271597.1 1052026 D 557436 CDS YP_001271598.1 148544228 5189242 1053100..1054710 1 NC_009513.1 PFAM: transposase, IS4 family protein; transposase, IS4 family protein 1054710 5189242 Lreu_1000 Lactobacillus reuteri DSM 20016 transposase, IS4 family protein YP_001271598.1 1053100 D 557436 CDS YP_001271599.1 148544229 5189294 complement(1055060..1055716) 1 NC_009513.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 1055716 5189294 Lreu_1002 Lactobacillus reuteri DSM 20016 integrase catalytic subunit YP_001271599.1 1055060 R 557436 CDS YP_001271600.1 148544230 5188419 complement(1055765..1056028) 1 NC_009513.1 hypothetical protein 1056028 5188419 Lreu_1003 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271600.1 1055765 R 557436 CDS YP_001271601.1 148544231 5189086 complement(1056290..1056748) 1 NC_009513.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 1056748 5189086 Lreu_1004 Lactobacillus reuteri DSM 20016 transposase IS200-family protein YP_001271601.1 1056290 R 557436 CDS YP_001271602.1 148544232 5188437 1057001..1057960 1 NC_009513.1 hypothetical protein 1057960 5188437 Lreu_1005 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271602.1 1057001 D 557436 CDS YP_001271603.1 148544233 5189077 1057976..1058407 1 NC_009513.1 hypothetical protein 1058407 5189077 Lreu_1006 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271603.1 1057976 D 557436 CDS YP_001271604.1 148544234 5189193 1059466..1059960 1 NC_009513.1 PFAM: regulatory protein, Crp; CRP/FNR family transcriptional regulator 1059960 5189193 Lreu_1007 Lactobacillus reuteri DSM 20016 CRP/FNR family transcriptional regulator YP_001271604.1 1059466 D 557436 CDS YP_001271605.1 148544235 5188336 1060152..1060340 1 NC_009513.1 hypothetical protein 1060340 5188336 Lreu_1008 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271605.1 1060152 D 557436 CDS YP_001271606.1 148544236 5188427 1060330..1060686 1 NC_009513.1 PFAM: IS66 Orf2 family protein; IS66 Orf2 family protein 1060686 5188427 Lreu_1009 Lactobacillus reuteri DSM 20016 IS66 Orf2 family protein YP_001271606.1 1060330 D 557436 CDS YP_001271607.1 148544237 5188155 1060757..1062301 1 NC_009513.1 PFAM: transposase IS66; transposase IS66 1062301 5188155 Lreu_1010 Lactobacillus reuteri DSM 20016 transposase IS66 YP_001271607.1 1060757 D 557436 CDS YP_001271608.1 148544238 5188463 complement(1062448..1064337) 1 NC_009513.1 hypothetical protein 1064337 5188463 Lreu_1011 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271608.1 1062448 R 557436 CDS YP_001271609.1 148544239 5188455 complement(1064338..1064643) 1 NC_009513.1 hypothetical protein 1064643 5188455 Lreu_1012 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271609.1 1064338 R 557436 CDS YP_001271610.1 148544240 5188508 1064923..1065732 1 NC_009513.1 PFAM: hydroxyethylthiazole kinase; hydroxyethylthiazole kinase 1065732 5188508 Lreu_1013 Lactobacillus reuteri DSM 20016 hydroxyethylthiazole kinase YP_001271610.1 1064923 D 557436 CDS YP_001271611.1 148544241 5188148 1065704..1066543 1 NC_009513.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 1066543 5188148 Lreu_1014 Lactobacillus reuteri DSM 20016 phosphomethylpyrimidine kinase YP_001271611.1 1065704 D 557436 CDS YP_001271612.1 148544242 5188285 1066540..1067187 1 NC_009513.1 TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 1067187 5188285 Lreu_1015 Lactobacillus reuteri DSM 20016 thiamine-phosphate pyrophosphorylase YP_001271612.1 1066540 D 557436 CDS YP_001271613.1 148544243 5189872 complement(1067263..1068522) 1 NC_009513.1 PFAM: Chloride channel, core; chloride channel protein 1068522 5189872 Lreu_1016 Lactobacillus reuteri DSM 20016 chloride channel protein YP_001271613.1 1067263 R 557436 CDS YP_001271614.1 148544244 5188193 complement(1068680..1070986) 1 NC_009513.1 PFAM: glycoside hydrolase, family 31; Alpha-glucosidase 1070986 5188193 Lreu_1017 Lactobacillus reuteri DSM 20016 Alpha-glucosidase YP_001271614.1 1068680 R 557436 CDS YP_001271615.1 148544245 5188415 1071110..1071772 1 NC_009513.1 PFAM: phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 1071772 5188415 Lreu_1018 Lactobacillus reuteri DSM 20016 PA-phosphatase-like phosphoesterase YP_001271615.1 1071110 D 557436 CDS YP_001271616.1 148544246 5188290 1071945..1072133 1 NC_009513.1 hypothetical protein 1072133 5188290 Lreu_1019 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271616.1 1071945 D 557436 CDS YP_001271617.1 148544247 5188161 1072123..1072479 1 NC_009513.1 PFAM: IS66 Orf2 family protein; IS66 Orf2 family protein 1072479 5188161 Lreu_1020 Lactobacillus reuteri DSM 20016 IS66 Orf2 family protein YP_001271617.1 1072123 D 557436 CDS YP_001271618.1 148544248 5189278 1072546..1074075 1 NC_009513.1 PFAM: transposase IS66; transposase IS66 1074075 5189278 Lreu_1021 Lactobacillus reuteri DSM 20016 transposase IS66 YP_001271618.1 1072546 D 557436 CDS YP_001271619.1 148544249 5188911 complement(1079768..1080256) 1 NC_009513.1 hypothetical protein 1080256 5188911 Lreu_1022 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271619.1 1079768 R 557436 CDS YP_001271620.1 148544250 5188908 complement(1080287..1081294) 1 NC_009513.1 hypothetical protein 1081294 5188908 Lreu_1023 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271620.1 1080287 R 557436 CDS YP_001271621.1 148544251 5189026 complement(1081481..1081768) 1 NC_009513.1 hypothetical protein 1081768 5189026 Lreu_1024 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271621.1 1081481 R 557436 CDS YP_001271622.1 148544252 5188914 complement(1081877..1082713) 1 NC_009513.1 PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 1082713 5188914 Lreu_1025 Lactobacillus reuteri DSM 20016 phosphoglycerate mutase YP_001271622.1 1081877 R 557436 CDS YP_001271623.1 148544253 5188906 1082877..1083581 1 NC_009513.1 PFAM: glucosamine/galactosamine-6-phosphate isomerase; glucosamine/galactosamine-6-phosphate isomerase 1083581 5188906 Lreu_1026 Lactobacillus reuteri DSM 20016 glucosamine/galactosamine-6-phosphate isomerase YP_001271623.1 1082877 D 557436 CDS YP_001271624.1 148544254 5188913 complement(1083578..1084138) 1 NC_009513.1 PFAM: filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 1084138 5188913 Lreu_1027 Lactobacillus reuteri DSM 20016 filamentation induced by cAMP protein fic YP_001271624.1 1083578 R 557436 CDS YP_001271625.1 148544255 5188889 complement(1084140..1084553) 1 NC_009513.1 hypothetical protein 1084553 5188889 Lreu_1028 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271625.1 1084140 R 557436 CDS YP_001271626.1 148544256 5188594 complement(1084663..1086921) 1 NC_009513.1 TIGRFAM: LPXTG-motif cell wall anchor domain; PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; cell wall anchor domain-containing protein 1086921 5188594 Lreu_1029 Lactobacillus reuteri DSM 20016 cell wall anchor domain-containing protein YP_001271626.1 1084663 R 557436 CDS YP_001271627.1 148544257 5188340 1087127..1087804 1 NC_009513.1 hypothetical protein 1087804 5188340 Lreu_1030 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271627.1 1087127 D 557436 CDS YP_001271628.1 148544258 5189182 complement(1088444..1091545) 1 NC_009513.1 PFAM: SMC domain protein; SMC domain-containing protein 1091545 5189182 Lreu_1031 Lactobacillus reuteri DSM 20016 SMC domain-containing protein YP_001271628.1 1088444 R 557436 CDS YP_001271629.1 148544259 5188448 complement(1091547..1092665) 1 NC_009513.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; nuclease SbcCD subunit D 1092665 5188448 Lreu_1032 Lactobacillus reuteri DSM 20016 nuclease SbcCD subunit D YP_001271629.1 1091547 R 557436 CDS YP_001271630.1 148544260 5188152 complement(1092818..1092994) 1 NC_009513.1 hypothetical protein 1092994 5188152 Lreu_1033 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271630.1 1092818 R 557436 CDS YP_001271631.1 148544261 5189428 complement(1093013..1093789) 1 NC_009513.1 PFAM: PHP C-terminal domain protein; protein-tyrosine-phosphatase 1093789 5189428 Lreu_1034 Lactobacillus reuteri DSM 20016 protein-tyrosine-phosphatase YP_001271631.1 1093013 R 557436 CDS YP_001271632.1 148544262 5188163 complement(1093886..1094761) 1 NC_009513.1 PFAM: helicase domain protein; helicase domain-containing protein 1094761 5188163 Lreu_1035 Lactobacillus reuteri DSM 20016 helicase domain-containing protein YP_001271632.1 1093886 R 557436 CDS YP_001271633.1 148544263 5188515 complement(1094873..1097371) 1 NC_009513.1 PFAM: zinc finger, SWIM domain protein; SNF2 helicase associated domain protein; SMART: DEAD-like helicases-like; SNF2 helicase associated domain-containing protein 1097371 5188515 Lreu_1036 Lactobacillus reuteri DSM 20016 SNF2 helicase associated domain-containing protein YP_001271633.1 1094873 R 557436 CDS YP_001271634.1 148544264 5189241 complement(1097436..1099328) 1 NC_009513.1 hypothetical protein 1099328 5189241 Lreu_1037 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271634.1 1097436 R 557436 CDS YP_001271635.1 148544265 5189162 complement(1099638..1100429) 1 NC_009513.1 hypothetical protein 1100429 5189162 Lreu_1038 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271635.1 1099638 R 557436 CDS YP_001271636.1 148544266 5189135 complement(1100450..1101244) 1 NC_009513.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 1101244 5189135 Lreu_1039 Lactobacillus reuteri DSM 20016 XRE family transcriptional regulator YP_001271636.1 1100450 R 557436 CDS YP_001271637.1 148544267 5188723 complement(1101444..1101701) 1 NC_009513.1 hypothetical protein 1101701 5188723 Lreu_1040 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271637.1 1101444 R 557436 CDS YP_001271638.1 148544268 5189280 complement(1101780..1103183) 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 1103183 5189280 Lreu_1041 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001271638.1 1101780 R 557436 CDS YP_001271639.1 148544269 5189060 complement(1103176..1104108) 1 NC_009513.1 converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines; homocysteine methyltransferase 1104108 mmuM 5189060 mmuM Lactobacillus reuteri DSM 20016 homocysteine methyltransferase YP_001271639.1 1103176 R 557436 CDS YP_001271640.1 148544270 5188195 complement(1104553..1104978) 1 NC_009513.1 hypothetical protein 1104978 5188195 Lreu_1043 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271640.1 1104553 R 557436 CDS YP_001271641.1 148544271 5189477 1105270..1106238 1 NC_009513.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 1106238 5189477 Lreu_1044 Lactobacillus reuteri DSM 20016 integrase catalytic subunit YP_001271641.1 1105270 D 557436 CDS YP_001271642.1 148544272 5188414 complement(1106240..1107109) 1 NC_009513.1 hypothetical protein 1107109 5188414 Lreu_1045 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271642.1 1106240 R 557436 CDS YP_001271643.1 148544273 5188553 complement(1107246..1108004) 1 NC_009513.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; IstB ATP binding domain-containing protein 1108004 5188553 Lreu_1046 Lactobacillus reuteri DSM 20016 IstB ATP binding domain-containing protein YP_001271643.1 1107246 R 557436 CDS YP_001271644.1 148544274 5188269 complement(1108009..1109220) 1 NC_009513.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 1109220 5188269 Lreu_1047 Lactobacillus reuteri DSM 20016 integrase catalytic subunit YP_001271644.1 1108009 R 557436 CDS YP_001271645.1 148544275 5188665 complement(1109397..1110488) 1 NC_009513.1 superfamily I DNA/RNA helicase-like protein 1110488 5188665 Lreu_1048 Lactobacillus reuteri DSM 20016 superfamily I DNA/RNA helicase-like protein YP_001271645.1 1109397 R 557436 CDS YP_001271646.1 148544276 5188186 complement(1110473..1112086) 1 NC_009513.1 SMART: AAA ATPase; ATPase AAA 1112086 5188186 Lreu_1049 Lactobacillus reuteri DSM 20016 ATPase AAA YP_001271646.1 1110473 R 557436 CDS YP_001271647.1 148544277 5189244 complement(1112544..1112765) 1 NC_009513.1 hypothetical protein 1112765 5189244 Lreu_1050 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271647.1 1112544 R 557436 CDS YP_001271648.1 148544278 5189896 complement(1113328..1115346) 1 NC_009513.1 PFAM: KAP P-loop domain protein; KAP P-loop domain-containing protein 1115346 5189896 Lreu_1051 Lactobacillus reuteri DSM 20016 KAP P-loop domain-containing protein YP_001271648.1 1113328 R 557436 CDS YP_001271649.1 148544279 5188383 complement(1116757..1118340) 1 NC_009513.1 hypothetical protein 1118340 5188383 Lreu_1053 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271649.1 1116757 R 557436 CDS YP_001271650.1 148544280 5188249 complement(1118440..1119285) 1 NC_009513.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; dTDP-4-dehydrorhamnose reductase 1119285 5188249 Lreu_1054 Lactobacillus reuteri DSM 20016 dTDP-4-dehydrorhamnose reductase YP_001271650.1 1118440 R 557436 CDS YP_001271651.1 148544281 5188353 complement(1119432..1120319) 1 NC_009513.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility C-terminal domain; dTDP-glucose 4,6-dehydratase 1120319 5188353 Lreu_1055 Lactobacillus reuteri DSM 20016 dTDP-glucose 4,6-dehydratase YP_001271651.1 1119432 R 557436 CDS YP_001271652.1 148544282 5188649 complement(1120617..1121618) 1 NC_009513.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 1121618 5188649 Lreu_1057 Lactobacillus reuteri DSM 20016 cell envelope-related transcriptional attenuator YP_001271652.1 1120617 R 557436 CDS YP_001271653.1 148544283 5188622 complement(1122015..1122413) 1 NC_009513.1 PFAM: helix-turn-helix, HxlR type; HxlR family transcriptional regulator 1122413 5188622 Lreu_1058 Lactobacillus reuteri DSM 20016 HxlR family transcriptional regulator YP_001271653.1 1122015 R 557436 CDS YP_001271654.1 148544284 5188703 complement(1122519..1123043) 1 NC_009513.1 hypothetical protein 1123043 5188703 Lreu_1059 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271654.1 1122519 R 557436 CDS YP_001271655.1 148544285 5188629 complement(1124352..1124696) 1 NC_009513.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 1124696 5188629 Lreu_1061 Lactobacillus reuteri DSM 20016 transposase IS200-family protein YP_001271655.1 1124352 R 557436 CDS YP_001271656.1 148544286 5189155 1125301..1125876 1 NC_009513.1 ECF subfamily RNA polymerase sigma-24 factor 1125876 5189155 Lreu_1062 Lactobacillus reuteri DSM 20016 ECF subfamily RNA polymerase sigma-24 factor YP_001271656.1 1125301 D 557436 CDS YP_001271657.1 148544287 5188283 1125886..1126122 1 NC_009513.1 hypothetical protein 1126122 5188283 Lreu_1063 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271657.1 1125886 D 557436 CDS YP_001271658.1 148544288 5188428 complement(1126164..1126667) 1 NC_009513.1 hypothetical protein 1126667 5188428 Lreu_1064 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271658.1 1126164 R 557436 CDS YP_001271659.1 148544289 5188503 complement(1126723..1128225) 1 NC_009513.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY; glycerol kinase 1128225 5188503 Lreu_1065 Lactobacillus reuteri DSM 20016 glycerol kinase YP_001271659.1 1126723 R 557436 CDS YP_001271660.1 148544290 5190136 complement(1128360..1128545) 1 NC_009513.1 PFAM: 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 1128545 5190136 Lreu_1066 Lactobacillus reuteri DSM 20016 4-oxalocrotonate tautomerase YP_001271660.1 1128360 R 557436 CDS YP_001271661.1 148544291 5189062 complement(1128628..1130457) 1 NC_009513.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; sodium/hydrogen exchanger 1130457 5189062 Lreu_1067 Lactobacillus reuteri DSM 20016 sodium/hydrogen exchanger YP_001271661.1 1128628 R 557436 CDS YP_001271662.1 148544292 5188434 1130596..1131999 1 NC_009513.1 PFAM: peptidase U34, dipeptidase; peptidase U34, dipeptidase 1131999 5188434 Lreu_1068 Lactobacillus reuteri DSM 20016 peptidase U34, dipeptidase YP_001271662.1 1130596 D 557436 CDS YP_001271663.1 148544293 5188405 1132151..1132864 1 NC_009513.1 hypothetical protein 1132864 5188405 Lreu_1069 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271663.1 1132151 D 557436 CDS YP_001271664.1 148544294 5188510 1132861..1133712 1 NC_009513.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 1133712 5188510 Lreu_1070 Lactobacillus reuteri DSM 20016 integrase catalytic subunit YP_001271664.1 1132861 D 557436 CDS YP_001271665.1 148544295 5188197 complement(1134250..1135917) 1 NC_009513.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1135917 5188197 Lreu_1071 Lactobacillus reuteri DSM 20016 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001271665.1 1134250 R 557436 CDS YP_001271666.1 148544296 5188438 complement(1135931..1136494) 1 NC_009513.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; peroxiredoxin 1136494 5188438 Lreu_1072 Lactobacillus reuteri DSM 20016 peroxiredoxin YP_001271666.1 1135931 R 557436 CDS YP_001271667.1 148544297 5188907 complement(1136595..1137476) 1 NC_009513.1 TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; PFAM: serine dehydratase alpha chain; L-serine dehydratase, iron-sulfur-dependent subunit alpha 1137476 5188907 Lreu_1073 Lactobacillus reuteri DSM 20016 L-serine dehydratase, iron-sulfur-dependent subunit alpha YP_001271667.1 1136595 R 557436 CDS YP_001271668.1 148544298 5188170 complement(1137488..1138150) 1 NC_009513.1 PFAM: serine dehydratase beta chain; L-serine ammonia-lyase 1138150 5188170 Lreu_1074 Lactobacillus reuteri DSM 20016 L-serine ammonia-lyase YP_001271668.1 1137488 R 557436 CDS YP_001271669.1 148544299 5189120 complement(1138222..1138449) 1 NC_009513.1 hypothetical protein 1138449 5189120 Lreu_1075 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271669.1 1138222 R 557436 CDS YP_001271670.1 148544300 5190117 complement(1138449..1138913) 1 NC_009513.1 hypothetical protein 1138913 5190117 Lreu_1076 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271670.1 1138449 R 557436 CDS YP_001271671.1 148544301 5189121 complement(1139282..1139551) 1 NC_009513.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 1139551 rpsN 5189121 rpsN Lactobacillus reuteri DSM 20016 30S ribosomal protein S14 YP_001271671.1 1139282 R 557436 CDS YP_001271672.1 148544302 5188280 complement(1139697..1140548) 1 NC_009513.1 PFAM: metallophosphoesterase; metallophosphoesterase 1140548 5188280 Lreu_1078 Lactobacillus reuteri DSM 20016 metallophosphoesterase YP_001271672.1 1139697 R 557436 CDS YP_001271673.1 148544303 5188204 1140706..1141929 1 NC_009513.1 PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter 1141929 5188204 Lreu_1079 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001271673.1 1140706 D 557436 CDS YP_001271674.1 148544304 5188400 1141950..1142651 1 NC_009513.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 1142651 ubiE 5188400 ubiE Lactobacillus reuteri DSM 20016 ubiquinone/menaquinone biosynthesis methyltransferase YP_001271674.1 1141950 D 557436 CDS YP_001271675.1 148544305 5189404 1143076..1144215 1 NC_009513.1 PFAM: Methionine synthase, vitamin-B12 independent; Cobalamin-independent synthase MetE, N-terminal domain protein; methionine synthase, vitamin-B12 independent 1144215 5189404 Lreu_1081 Lactobacillus reuteri DSM 20016 methionine synthase, vitamin-B12 independent YP_001271675.1 1143076 D 557436 CDS YP_001271676.1 148544306 5188528 1144233..1144976 1 NC_009513.1 PFAM: cyclase family protein; cyclase family protein 1144976 5188528 Lreu_1082 Lactobacillus reuteri DSM 20016 cyclase family protein YP_001271676.1 1144233 D 557436 CDS YP_001271677.1 148544307 5188196 complement(1145038..1145937) 1 NC_009513.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1145937 5188196 Lreu_1083 Lactobacillus reuteri DSM 20016 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_001271677.1 1145038 R 557436 CDS YP_001271678.1 148544308 5188289 1146018..1146998 1 NC_009513.1 PFAM: Polyprenyl synthetase; polyprenyl synthetase 1146998 5188289 Lreu_1084 Lactobacillus reuteri DSM 20016 polyprenyl synthetase YP_001271678.1 1146018 D 557436 CDS YP_001271679.1 148544309 5188229 complement(1147045..1149063) 1 NC_009513.1 PFAM: Glycoside hydrolase, family 42, N-terminal domain protein; Beta-galactosidase trimerisation domain protein; beta-galactosidase 1149063 5188229 Lreu_1085 Lactobacillus reuteri DSM 20016 beta-galactosidase YP_001271679.1 1147045 R 557436 CDS YP_001271680.1 148544310 5188253 complement(1149073..1150995) 1 NC_009513.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: sugar-specific permease, EIIA 1 domain; sugar (glycoside-Pentoside-hexuronide) transporter 1150995 5188253 Lreu_1086 Lactobacillus reuteri DSM 20016 sugar (glycoside-Pentoside-hexuronide) transporter YP_001271680.1 1149073 R 557436 CDS YP_001271681.1 148544311 5188181 complement(1151156..1152175) 1 NC_009513.1 PFAM: regulatory protein, LacI; LacI family transcriptional regulator 1152175 5188181 Lreu_1087 Lactobacillus reuteri DSM 20016 LacI family transcriptional regulator YP_001271681.1 1151156 R 557436 CDS YP_001271682.1 148544312 5188582 1152344..1152823 1 NC_009513.1 hypothetical protein 1152823 5188582 Lreu_1088 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271682.1 1152344 D 557436 CDS YP_001271683.1 148544313 5188505 complement(1152907..1154289) 1 NC_009513.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 1154289 5188505 Lreu_1089 Lactobacillus reuteri DSM 20016 RNA-directed DNA polymerase YP_001271683.1 1152907 R 557436 CDS YP_001271684.1 148544314 5188366 complement(1154785..1155612) 1 NC_009513.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth 1155612 5188366 Lreu_1090 Lactobacillus reuteri DSM 20016 exodeoxyribonuclease III Xth YP_001271684.1 1154785 R 557436 CDS YP_001271685.1 148544315 5188651 complement(1155615..1155947) 1 NC_009513.1 hypothetical protein 1155947 5188651 Lreu_1091 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271685.1 1155615 R 557436 CDS YP_001271686.1 148544316 5188333 1156088..1156321 1 NC_009513.1 hypothetical protein 1156321 5188333 Lreu_1092 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271686.1 1156088 D 557436 CDS YP_001271687.1 148544317 5188593 complement(1156784..1157242) 1 NC_009513.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 1157242 5188593 Lreu_1093 Lactobacillus reuteri DSM 20016 transposase IS200-family protein YP_001271687.1 1156784 R 557436 CDS YP_001271688.1 148544318 5189029 complement(1158479..1159678) 1 NC_009513.1 PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramoyl-L-alanine amidase 1159678 5189029 Lreu_1094 Lactobacillus reuteri DSM 20016 N-acetylmuramoyl-L-alanine amidase YP_001271688.1 1158479 R 557436 CDS YP_001271689.1 148544319 5189195 complement(1159668..1160039) 1 NC_009513.1 hypothetical protein 1160039 5189195 Lreu_1095 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271689.1 1159668 R 557436 CDS YP_001271690.1 148544320 5189057 complement(1160036..1160362) 1 NC_009513.1 hypothetical protein 1160362 5189057 Lreu_1096 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271690.1 1160036 R 557436 CDS YP_001271691.1 148544321 5188315 complement(1160377..1161465) 1 NC_009513.1 hypothetical protein 1161465 5188315 Lreu_1097 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271691.1 1160377 R 557436 CDS YP_001271692.1 148544322 5188435 complement(1161504..1161950) 1 NC_009513.1 hypothetical protein 1161950 5188435 Lreu_1098 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271692.1 1161504 R 557436 CDS YP_001271693.1 148544323 5189079 complement(1162206..1162610) 1 NC_009513.1 hypothetical protein 1162610 5189079 Lreu_1099 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271693.1 1162206 R 557436 CDS YP_001271694.1 148544324 5188652 complement(1162622..1163731) 1 NC_009513.1 hypothetical protein 1163731 5188652 Lreu_1100 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271694.1 1162622 R 557436 CDS YP_001271695.1 148544325 5189119 complement(1163734..1164879) 1 NC_009513.1 PFAM: lipolytic protein, G-D-S-L family; GDSL family lipase 1164879 5189119 Lreu_1101 Lactobacillus reuteri DSM 20016 GDSL family lipase YP_001271695.1 1163734 R 557436 CDS YP_001271696.1 148544326 5189208 complement(1164892..1165161) 1 NC_009513.1 hypothetical protein 1165161 5189208 Lreu_1102 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271696.1 1164892 R 557436 CDS YP_001271697.1 148544327 5189205 complement(1165204..1165446) 1 NC_009513.1 hypothetical protein 1165446 5189205 Lreu_1103 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271697.1 1165204 R 557436 CDS YP_001271698.1 148544328 5188674 complement(1165439..1169518) 1 NC_009513.1 chromosome segregation ATPase-like protein 1169518 5188674 Lreu_1104 Lactobacillus reuteri DSM 20016 chromosome segregation ATPase-like protein YP_001271698.1 1165439 R 557436 CDS YP_001271699.1 148544329 5188616 complement(1169466..1171211) 1 NC_009513.1 PFAM: NLP/P60 protein; NLP/P60 protein 1171211 5188616 Lreu_1105 Lactobacillus reuteri DSM 20016 NLP/P60 protein YP_001271699.1 1169466 R 557436 CDS YP_001271700.1 148544330 5188190 complement(1171225..1172070) 1 NC_009513.1 PFAM: protein of unknown function DUF1306; hypothetical protein 1172070 5188190 Lreu_1106 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271700.1 1171225 R 557436 CDS YP_001271701.1 148544331 5189234 complement(1172085..1175915) 1 NC_009513.1 TIGRFAM: phage tape measure protein; PFAM: Lytic transglycosylase, catalytic; phage tape measure protein 1175915 5189234 Lreu_1107 Lactobacillus reuteri DSM 20016 phage tape measure protein YP_001271701.1 1172085 R 557436 CDS YP_001271702.1 148544332 5188688 complement(1176141..1176527) 1 NC_009513.1 hypothetical protein 1176527 5188688 Lreu_1108 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271702.1 1176141 R 557436 CDS YP_001271703.1 148544333 5189322 complement(1176589..1177299) 1 NC_009513.1 PFAM: phage major tail protein; phage major tail protein 1177299 5189322 Lreu_1109 Lactobacillus reuteri DSM 20016 phage major tail protein YP_001271703.1 1176589 R 557436 CDS YP_001271704.1 148544334 5189146 complement(1177304..1177687) 1 NC_009513.1 PFAM: protein of unknown function DUF806; hypothetical protein 1177687 5189146 Lreu_1110 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271704.1 1177304 R 557436 CDS YP_001271705.1 148544335 5189233 complement(1177684..1178100) 1 NC_009513.1 TIGRFAM: phage protein, HK97 gp10 family; PFAM: protein of unknown function DUF646, phage head/tail component; HK97 family phage protein 1178100 5189233 Lreu_1111 Lactobacillus reuteri DSM 20016 HK97 family phage protein YP_001271705.1 1177684 R 557436 CDS YP_001271706.1 148544336 5189341 complement(1178102..1178452) 1 NC_009513.1 TIGRFAM: phage head-tail adaptor, putative; PFAM: phage head-tail joining family protein; phage head-tail adaptor 1178452 5189341 Lreu_1112 Lactobacillus reuteri DSM 20016 phage head-tail adaptor YP_001271706.1 1178102 R 557436 CDS YP_001271707.1 148544337 5189174 complement(1178421..1178789) 1 NC_009513.1 TIGRFAM: uncharacterized phage protein (possible DNA packaging); PFAM: Uncharacterized phage protein (possible DNA packaging); phage protein DNA packaging protein 1178789 5189174 Lreu_1113 Lactobacillus reuteri DSM 20016 phage protein DNA packaging protein YP_001271707.1 1178421 R 557436 CDS YP_001271708.1 148544338 5188586 complement(1178809..1179984) 1 NC_009513.1 TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; HK97 family phage major capsid protein 1179984 5188586 Lreu_1114 Lactobacillus reuteri DSM 20016 HK97 family phage major capsid protein YP_001271708.1 1178809 R 557436 CDS YP_001271709.1 148544339 5189314 complement(1179974..1180705) 1 NC_009513.1 PFAM: peptidase S14, ClpP; peptidase S14, ClpP 1180705 5189314 Lreu_1115 Lactobacillus reuteri DSM 20016 peptidase S14, ClpP YP_001271709.1 1179974 R 557436 CDS YP_001271710.1 148544340 5189275 complement(1180692..1181882) 1 NC_009513.1 TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; HK97 family phage portal protein 1181882 5189275 Lreu_1116 Lactobacillus reuteri DSM 20016 HK97 family phage portal protein YP_001271710.1 1180692 R 557436 CDS YP_001271711.1 148544341 5189355 complement(1182069..1183958) 1 NC_009513.1 PFAM: phage Terminase; phage terminase 1183958 5189355 Lreu_1117 Lactobacillus reuteri DSM 20016 phage terminase YP_001271711.1 1182069 R 557436 CDS YP_001271712.1 148544342 5189081 1184024..1184197 1 NC_009513.1 hypothetical protein 1184197 5189081 Lreu_1118 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271712.1 1184024 D 557436 CDS YP_001271713.1 148544343 5188705 1184194..1184631 1 NC_009513.1 hypothetical protein 1184631 5188705 Lreu_1119 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271713.1 1184194 D 557436 CDS YP_001271714.1 148544344 5189145 complement(1184654..1185127) 1 NC_009513.1 TIGRFAM: phage terminase, small subunit, putative, P27 family; PFAM: phage terminase, small subunit, putative, P27; P27 family phage terminase small subunit 1185127 5189145 Lreu_1120 Lactobacillus reuteri DSM 20016 P27 family phage terminase small subunit YP_001271714.1 1184654 R 557436 CDS YP_001271715.1 148544345 5189053 complement(1185272..1185808) 1 NC_009513.1 PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 1185808 5189053 Lreu_1121 Lactobacillus reuteri DSM 20016 HNH endonuclease YP_001271715.1 1185272 R 557436 CDS YP_001271716.1 148544346 5189202 complement(1185876..1186055) 1 NC_009513.1 hypothetical protein 1186055 5189202 Lreu_1122 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271716.1 1185876 R 557436 CDS YP_001271717.1 148544347 5189343 complement(1186715..1187173) 1 NC_009513.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 1187173 5189343 Lreu_1123 Lactobacillus reuteri DSM 20016 transposase IS200-family protein YP_001271717.1 1186715 R 557436 CDS YP_001271718.1 148544348 5189250 complement(1187446..1188288) 1 NC_009513.1 hypothetical protein 1188288 5189250 Lreu_1124 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271718.1 1187446 R 557436 CDS YP_001271719.1 148544349 5189286 complement(1189194..1189616) 1 NC_009513.1 hypothetical protein 1189616 5189286 Lreu_1125 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271719.1 1189194 R 557436 CDS YP_001271720.1 148544350 5189352 complement(1189698..1189841) 1 NC_009513.1 hypothetical protein 1189841 5189352 Lreu_1126 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271720.1 1189698 R 557436 CDS YP_001271721.1 148544351 5188641 complement(1189904..1190215) 1 NC_009513.1 hypothetical protein 1190215 5188641 Lreu_1127 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271721.1 1189904 R 557436 CDS YP_001271722.1 148544352 5188365 complement(1190215..1190475) 1 NC_009513.1 hypothetical protein 1190475 5188365 Lreu_1128 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271722.1 1190215 R 557436 CDS YP_001271723.1 148544353 5188192 complement(1190483..1190671) 1 NC_009513.1 hypothetical protein 1190671 5188192 Lreu_1129 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271723.1 1190483 R 557436 CDS YP_001271724.1 148544354 5188449 complement(1190671..1191012) 1 NC_009513.1 hypothetical protein 1191012 5188449 Lreu_1130 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271724.1 1190671 R 557436 CDS YP_001271725.1 148544355 5188475 complement(1191012..1191272) 1 NC_009513.1 hypothetical protein 1191272 5188475 Lreu_1131 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271725.1 1191012 R 557436 CDS YP_001271726.1 148544356 5188310 complement(1191272..1191466) 1 NC_009513.1 hypothetical protein 1191466 5188310 Lreu_1132 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271726.1 1191272 R 557436 CDS YP_001271727.1 148544357 5188498 complement(1191510..1191671) 1 NC_009513.1 hypothetical protein 1191671 5188498 Lreu_1133 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271727.1 1191510 R 557436 CDS YP_001271728.1 148544358 5189037 complement(1191847..1192125) 1 NC_009513.1 hypothetical protein 1192125 5189037 Lreu_1134 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271728.1 1191847 R 557436 CDS YP_001271729.1 148544359 5189099 complement(1192201..1192572) 1 NC_009513.1 hypothetical protein 1192572 5189099 Lreu_1135 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271729.1 1192201 R 557436 CDS YP_001271730.1 148544360 5189064 complement(1192569..1192898) 1 NC_009513.1 hypothetical protein 1192898 5189064 Lreu_1136 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271730.1 1192569 R 557436 CDS YP_001271731.1 148544361 5189080 complement(1192891..1193748) 1 NC_009513.1 TIGRFAM: primosome, DnaD subunit; primosome subunit DnaD 1193748 5189080 Lreu_1137 Lactobacillus reuteri DSM 20016 primosome subunit DnaD YP_001271731.1 1192891 R 557436 CDS YP_001271732.1 148544362 5189106 complement(1193753..1194577) 1 NC_009513.1 hypothetical protein 1194577 5189106 Lreu_1138 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271732.1 1193753 R 557436 CDS YP_001271733.1 148544363 5189153 complement(1194561..1195550) 1 NC_009513.1 PFAM: RecT protein; RecT protein 1195550 5189153 Lreu_1139 Lactobacillus reuteri DSM 20016 RecT protein YP_001271733.1 1194561 R 557436 CDS YP_001271734.1 148544364 5189246 complement(1195543..1195773) 1 NC_009513.1 hypothetical protein 1195773 5189246 Lreu_1140 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271734.1 1195543 R 557436 CDS YP_001271735.1 148544365 5189350 1196047..1196553 1 NC_009513.1 hypothetical protein 1196553 5189350 Lreu_1141 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271735.1 1196047 D 557436 CDS YP_001271736.1 148544366 5189204 complement(1197123..1197926) 1 NC_009513.1 PFAM: BRO domain protein domain protein; phage antirepressor protein; phage antirepressor protein 1197926 5189204 Lreu_1142 Lactobacillus reuteri DSM 20016 phage antirepressor protein YP_001271736.1 1197123 R 557436 CDS YP_001271737.1 148544367 5189481 complement(1197945..1198148) 1 NC_009513.1 SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 1198148 5189481 Lreu_1143 Lactobacillus reuteri DSM 20016 XRE family transcriptional regulator YP_001271737.1 1197945 R 557436 CDS YP_001271738.1 148544368 5189239 1198327..1198764 1 NC_009513.1 PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 1198764 5189239 Lreu_1144 Lactobacillus reuteri DSM 20016 helix-turn-helix domain-containing protein YP_001271738.1 1198327 D 557436 CDS YP_001271739.1 148544369 5189048 1198777..1199217 1 NC_009513.1 PFAM: protein of unknown function DUF955; hypothetical protein 1199217 5189048 Lreu_1145 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271739.1 1198777 D 557436 CDS YP_001271740.1 148544370 5189243 1199346..1199855 1 NC_009513.1 PFAM: protein of unknown function DUF1535; hypothetical protein 1199855 5189243 Lreu_1146 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271740.1 1199346 D 557436 CDS YP_001271741.1 148544371 5189108 1200018..1200335 1 NC_009513.1 hypothetical protein 1200335 5189108 Lreu_1147 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271741.1 1200018 D 557436 CDS YP_001271742.1 148544372 5189030 1200338..1201468 1 NC_009513.1 PFAM: phage integrase family protein; phage integrase family protein 1201468 5189030 Lreu_1148 Lactobacillus reuteri DSM 20016 phage integrase family protein YP_001271742.1 1200338 D 557436 CDS YP_001271743.1 148544373 5188563 complement(1201582..1201968) 1 NC_009513.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1201968 rplS 5188563 rplS Lactobacillus reuteri DSM 20016 50S ribosomal protein L19 YP_001271743.1 1201582 R 557436 CDS YP_001271744.1 148544374 5189201 complement(1202064..1203494) 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 1203494 5189201 Lreu_1150 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001271744.1 1202064 R 557436 CDS YP_001271745.1 148544375 5189097 complement(1203505..1204263) 1 NC_009513.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1204263 trmD 5189097 trmD Lactobacillus reuteri DSM 20016 tRNA (guanine-N(1)-)-methyltransferase YP_001271745.1 1203505 R 557436 CDS YP_001271746.1 148544376 5188356 complement(1204263..1204769) 1 NC_009513.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1204769 rimM 5188356 rimM Lactobacillus reuteri DSM 20016 16S rRNA-processing protein RimM YP_001271746.1 1204263 R 557436 CDS YP_001271747.1 148544377 5188292 complement(1204824..1205084) 1 NC_009513.1 hypothetical protein 1205084 5188292 Lreu_1153 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271747.1 1204824 R 557436 CDS YP_001271748.1 148544378 5188363 complement(1205097..1205372) 1 NC_009513.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1205372 rpsP 5188363 rpsP Lactobacillus reuteri DSM 20016 30S ribosomal protein S16 YP_001271748.1 1205097 R 557436 CDS YP_001271749.1 148544379 5188180 complement(1205471..1206916) 1 NC_009513.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle subunit FFH/SRP54 (srp54) 1206916 5188180 Lreu_1155 Lactobacillus reuteri DSM 20016 signal recognition particle subunit FFH/SRP54 (srp54) YP_001271749.1 1205471 R 557436 CDS YP_001271750.1 148544380 5188451 complement(1206918..1207259) 1 NC_009513.1 PFAM: helix-turn-helix protein, YlxM/p13 family protein; DNA-binding protein 1207259 5188451 Lreu_1156 Lactobacillus reuteri DSM 20016 DNA-binding protein YP_001271750.1 1206918 R 557436 CDS YP_001271751.1 148544381 5188494 complement(1207274..1208800) 1 NC_009513.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 1208800 5188494 Lreu_1157 Lactobacillus reuteri DSM 20016 signal recognition particle-docking protein FtsY YP_001271751.1 1207274 R 557436 CDS YP_001271752.1 148544382 5188440 complement(1208823..1212386) 1 NC_009513.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; condensin subunit Smc 1212386 5188440 Lreu_1158 Lactobacillus reuteri DSM 20016 condensin subunit Smc YP_001271752.1 1208823 R 557436 CDS YP_001271753.1 148544383 5188484 complement(1212403..1213104) 1 NC_009513.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1213104 rnc 5188484 rnc Lactobacillus reuteri DSM 20016 ribonuclease III YP_001271753.1 1212403 R 557436 CDS YP_001271754.1 148544384 5188194 complement(1213281..1213535) 1 NC_009513.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1213535 acpP 5188194 acpP Lactobacillus reuteri DSM 20016 acyl carrier protein YP_001271754.1 1213281 R 557436 CDS YP_001271755.1 148544385 5188566 complement(1213572..1214603) 1 NC_009513.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1214603 5188566 Lreu_1161 Lactobacillus reuteri DSM 20016 glycerol-3-phosphate acyltransferase PlsX YP_001271755.1 1213572 R 557436 CDS YP_001271756.1 148544386 5188412 complement(1214621..1216657) 1 NC_009513.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1216657 5188412 Lreu_1162 Lactobacillus reuteri DSM 20016 ATP-dependent DNA helicase RecG YP_001271756.1 1214621 R 557436 CDS YP_001271757.1 148544387 5188341 complement(1216760..1218469) 1 NC_009513.1 PFAM: Dak phosphatase; Dak phosphatase 1218469 5188341 Lreu_1163 Lactobacillus reuteri DSM 20016 Dak phosphatase YP_001271757.1 1216760 R 557436 CDS YP_001271758.1 148544388 5188298 complement(1218495..1218857) 1 NC_009513.1 PFAM: protein of unknown function DUF322; hypothetical protein 1218857 5188298 Lreu_1164 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271758.1 1218495 R 557436 CDS YP_001271759.1 148544389 5188239 complement(1219052..1219237) 1 NC_009513.1 required for 70S ribosome assembly; 50S ribosomal protein L28 1219237 rpmB 5188239 rpmB Lactobacillus reuteri DSM 20016 50S ribosomal protein L28 YP_001271759.1 1219052 R 557436 CDS YP_001271760.1 148544390 5188575 complement(1219387..1220037) 1 NC_009513.1 TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase, catalytic region; thiamine pyrophosphokinase 1220037 5188575 Lreu_1166 Lactobacillus reuteri DSM 20016 thiamine pyrophosphokinase YP_001271760.1 1219387 R 557436 CDS YP_001271761.1 148544391 5188234 complement(1220123..1220776) 1 NC_009513.1 PFAM: ribulose-phosphate 3-epimerase; ribulose-5-phosphate 3-epimerase 1220776 5188234 Lreu_1167 Lactobacillus reuteri DSM 20016 ribulose-5-phosphate 3-epimerase YP_001271761.1 1220123 R 557436 CDS YP_001271762.1 148544392 5188238 complement(1220787..1221677) 1 NC_009513.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; ribosome small subunit-dependent GTPase A 1221677 5188238 Lreu_1168 Lactobacillus reuteri DSM 20016 ribosome small subunit-dependent GTPase A YP_001271762.1 1220787 R 557436 CDS YP_001271763.1 148544393 5188254 complement(1221690..1223594) 1 NC_009513.1 PFAM: protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; protein kinase 1223594 5188254 Lreu_1169 Lactobacillus reuteri DSM 20016 protein kinase YP_001271763.1 1221690 R 557436 CDS YP_001271764.1 148544394 5188318 complement(1223598..1224338) 1 NC_009513.1 PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; protein phosphatase 2C-like protein 1224338 5188318 Lreu_1170 Lactobacillus reuteri DSM 20016 protein phosphatase 2C-like protein YP_001271764.1 1223598 R 557436 CDS YP_001271765.1 148544395 5188281 complement(1224346..1225695) 1 NC_009513.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; sun protein 1225695 5188281 Lreu_1171 Lactobacillus reuteri DSM 20016 sun protein YP_001271765.1 1224346 R 557436 CDS YP_001271766.1 148544396 5188247 complement(1225685..1226638) 1 NC_009513.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; methionyl-tRNA formyltransferase 1226638 5188247 Lreu_1172 Lactobacillus reuteri DSM 20016 methionyl-tRNA formyltransferase YP_001271766.1 1225685 R 557436 CDS YP_001271767.1 148544397 5188185 complement(1226656..1229085) 1 NC_009513.1 TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; replication restart DNA helicase PriA 1229085 5188185 Lreu_1173 Lactobacillus reuteri DSM 20016 replication restart DNA helicase PriA YP_001271767.1 1226656 R 557436 CDS YP_001271768.1 148544398 5188549 complement(1229086..1230291) 1 NC_009513.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 1230291 5188549 Lreu_1174 Lactobacillus reuteri DSM 20016 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_001271768.1 1229086 R 557436 CDS YP_001271769.1 148544399 5190031 complement(1230402..1230620) 1 NC_009513.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; DNA-directed RNA polymerase subunit omega 1230620 5190031 Lreu_1175 Lactobacillus reuteri DSM 20016 DNA-directed RNA polymerase subunit omega YP_001271769.1 1230402 R 557436 CDS YP_001271770.1 148544400 5188675 complement(1230617..1231237) 1 NC_009513.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 1231237 gmk 5188675 gmk Lactobacillus reuteri DSM 20016 guanylate kinase YP_001271770.1 1230617 R 557436 CDS YP_001271771.1 148544401 5188316 1231396..1231728 1 NC_009513.1 hypothetical protein 1231728 5188316 Lreu_1177 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271771.1 1231396 D 557436 CDS YP_001271772.1 148544402 5188666 complement(1232004..1233683) 1 NC_009513.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; DNA repair protein RecN 1233683 5188666 Lreu_1178 Lactobacillus reuteri DSM 20016 DNA repair protein RecN YP_001271772.1 1232004 R 557436 CDS YP_001271773.1 148544403 5188408 complement(1233699..1234151) 1 NC_009513.1 PFAM: arginine repressor; ArgR family transcriptional regulator 1234151 5188408 Lreu_1179 Lactobacillus reuteri DSM 20016 ArgR family transcriptional regulator YP_001271773.1 1233699 R 557436 CDS YP_001271774.1 148544404 5188146 complement(1234170..1234991) 1 NC_009513.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; hemolysin A 1234991 5188146 Lreu_1180 Lactobacillus reuteri DSM 20016 hemolysin A YP_001271774.1 1234170 R 557436 CDS YP_001271775.1 148544405 5188222 complement(1235003..1235875) 1 NC_009513.1 PFAM: Polyprenyl synthetase; farnesyl-diphosphate synthase 1235875 5188222 Lreu_1181 Lactobacillus reuteri DSM 20016 farnesyl-diphosphate synthase YP_001271775.1 1235003 R 557436 CDS YP_001271776.1 148544406 5188164 complement(1235894..1236175) 1 NC_009513.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 1236175 5188164 Lreu_1182 Lactobacillus reuteri DSM 20016 exodeoxyribonuclease VII small subunit YP_001271776.1 1235894 R 557436 CDS YP_001271777.1 148544407 5188237 complement(1236177..1237514) 1 NC_009513.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1237514 xseA 5188237 xseA Lactobacillus reuteri DSM 20016 exodeoxyribonuclease VII large subunit YP_001271777.1 1236177 R 557436 CDS YP_001271778.1 148544408 5188346 complement(1237507..1238367) 1 NC_009513.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; methenyltetrahydrofolate cyclohydrolase 1238367 5188346 Lreu_1184 Lactobacillus reuteri DSM 20016 methenyltetrahydrofolate cyclohydrolase YP_001271778.1 1237507 R 557436 CDS YP_001271779.1 148544409 5188465 complement(1238496..1238912) 1 NC_009513.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1238912 nusB 5188465 nusB Lactobacillus reuteri DSM 20016 transcription antitermination protein NusB YP_001271779.1 1238496 R 557436 CDS YP_001271780.1 148544410 5188453 complement(1238914..1239351) 1 NC_009513.1 PFAM: protein of unknown function DUF322; hypothetical protein 1239351 5188453 Lreu_1186 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271780.1 1238914 R 557436 CDS YP_001271781.1 148544411 5188430 complement(1239441..1240115) 1 NC_009513.1 hypothetical protein 1240115 5188430 Lreu_1187 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271781.1 1239441 R 557436 CDS YP_001271782.1 148544412 5189801 complement(1240117..1241193) 1 NC_009513.1 PFAM: creatinase; peptidase M24; peptidase M24 1241193 5189801 Lreu_1188 Lactobacillus reuteri DSM 20016 peptidase M24 YP_001271782.1 1240117 R 557436 CDS YP_001271783.1 148544413 5188214 complement(1241206..1241913) 1 NC_009513.1 PFAM: alanine racemase domain protein; alanine racemase domain-containing protein 1241913 5188214 Lreu_1189 Lactobacillus reuteri DSM 20016 alanine racemase domain-containing protein YP_001271783.1 1241206 R 557436 CDS YP_001271784.1 148544414 5188610 complement(1242039..1242320) 1 NC_009513.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1242320 rpmA 5188610 rpmA Lactobacillus reuteri DSM 20016 50S ribosomal protein L27 YP_001271784.1 1242039 R 557436 CDS YP_001271785.1 148544415 5188171 complement(1242346..1242669) 1 NC_009513.1 PFAM: protein of unknown function DUF464; hypothetical protein 1242669 5188171 Lreu_1191 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271785.1 1242346 R 557436 CDS YP_001271786.1 148544416 5188394 complement(1242685..1242993) 1 NC_009513.1 PFAM: ribosomal protein L21; 50S ribosomal protein L21 1242993 rplU 5188394 rplU Lactobacillus reuteri DSM 20016 50S ribosomal protein L21 YP_001271786.1 1242685 R 557436 CDS YP_001271787.1 148544417 5189083 complement(1243208..1243840) 1 NC_009513.1 PFAM: regulatory protein, TetR; TetR family transcriptional regulator 1243840 5189083 Lreu_1193 Lactobacillus reuteri DSM 20016 TetR family transcriptional regulator YP_001271787.1 1243208 R 557436 CDS YP_001271788.1 148544418 5189163 complement(1244509..1245015) 1 NC_009513.1 hypothetical protein 1245015 5189163 Lreu_1194 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271788.1 1244509 R 557436 CDS YP_001271789.1 148544419 5188470 complement(1245045..1246073) 1 NC_009513.1 hypothetical protein 1246073 5188470 Lreu_1195 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271789.1 1245045 R 557436 CDS YP_001271790.1 148544420 5189141 complement(1246063..1246950) 1 NC_009513.1 hypothetical protein 1246950 5189141 Lreu_1196 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271790.1 1246063 R 557436 CDS YP_001271791.1 148544421 5189270 complement(1247279..1247593) 1 NC_009513.1 PFAM: protein of unknown function DUF59; hypothetical protein 1247593 5189270 Lreu_1197 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271791.1 1247279 R 557436 CDS YP_001271792.1 148544422 5189032 complement(1247596..1248123) 1 NC_009513.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 1248123 5189032 Lreu_1198 Lactobacillus reuteri DSM 20016 peptide methionine sulfoxide reductase YP_001271792.1 1247596 R 557436 CDS YP_001271793.1 148544423 5188213 complement(1248140..1248991) 1 NC_009513.1 PFAM: NLPA lipoprotein; NLPA lipoprotein 1248991 5188213 Lreu_1199 Lactobacillus reuteri DSM 20016 NLPA lipoprotein YP_001271793.1 1248140 R 557436 CDS YP_001271794.1 148544424 5188189 complement(1249675..1250856) 1 NC_009513.1 PFAM: aminotransferase, class I and II; aminotransferase 1250856 5188189 Lreu_1200 Lactobacillus reuteri DSM 20016 aminotransferase YP_001271794.1 1249675 R 557436 CDS YP_001271795.1 148544425 5189240 complement(1250971..1252476) 1 NC_009513.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1252476 gltX 5189240 gltX Lactobacillus reuteri DSM 20016 glutamyl-tRNA synthetase YP_001271795.1 1250971 R 557436 CDS YP_001271796.1 148544426 5188250 complement(1252721..1254064) 1 NC_009513.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; L-glutamine synthetase 1254064 5188250 Lreu_1202 Lactobacillus reuteri DSM 20016 L-glutamine synthetase YP_001271796.1 1252721 R 557436 CDS YP_001271797.1 148544427 5188257 complement(1254237..1255160) 1 NC_009513.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1255160 miaA 5188257 miaA Lactobacillus reuteri DSM 20016 tRNA delta(2)-isopentenylpyrophosphate transferase YP_001271797.1 1254237 R 557436 CDS YP_001271798.1 148544428 5188380 1255275..1255451 1 NC_009513.1 hypothetical protein 1255451 5188380 Lreu_1204 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271798.1 1255275 D 557436 CDS YP_001271799.1 148544429 5188166 complement(1255615..1256028) 1 NC_009513.1 PFAM: Rhodanese domain protein; rhodanese domain-containing protein 1256028 5188166 Lreu_1205 Lactobacillus reuteri DSM 20016 rhodanese domain-containing protein YP_001271799.1 1255615 R 557436 CDS YP_001271800.1 148544430 5189478 complement(1256048..1257019) 1 NC_009513.1 TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; glucokinase 1257019 5189478 Lreu_1206 Lactobacillus reuteri DSM 20016 glucokinase YP_001271800.1 1256048 R 557436 CDS YP_001271801.1 148544431 5189664 complement(1257044..1257283) 1 NC_009513.1 PFAM: protein of unknown function DUF910; hypothetical protein 1257283 5189664 Lreu_1207 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271801.1 1257044 R 557436 CDS YP_001271802.1 148544432 5189040 complement(1257290..1257949) 1 NC_009513.1 PFAM: Rhomboid family protein; rhomboid family protein 1257949 5189040 Lreu_1208 Lactobacillus reuteri DSM 20016 rhomboid family protein YP_001271802.1 1257290 R 557436 CDS YP_001271803.1 148544433 5188679 complement(1257953..1258507) 1 NC_009513.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 1258507 5188679 Lreu_1209 Lactobacillus reuteri DSM 20016 5-formyltetrahydrofolate cyclo-ligase YP_001271803.1 1257953 R 557436 CDS YP_001271804.1 148544434 5188710 complement(1258645..1258794) 1 NC_009513.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1258794 rpmG 5188710 rpmG Lactobacillus reuteri DSM 20016 50S ribosomal protein L33 YP_001271804.1 1258645 R 557436 CDS YP_001271805.1 148544435 5188762 complement(1258933..1261011) 1 NC_009513.1 PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; penicillin-binding protein, transpeptidase 1261011 5188762 Lreu_1211 Lactobacillus reuteri DSM 20016 penicillin-binding protein, transpeptidase YP_001271805.1 1258933 R 557436 CDS YP_001271806.1 148544436 5190015 1261242..1263857 1 NC_009513.1 hypothetical protein 1263857 5190015 Lreu_1212 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271806.1 1261242 D 557436 CDS YP_001271807.1 148544437 5188912 complement(1263943..1264332) 1 NC_009513.1 PFAM: HesB/YadR/YfhF-family protein; HesB/YadR/YfhF-family protein 1264332 5188912 Lreu_1213 Lactobacillus reuteri DSM 20016 HesB/YadR/YfhF-family protein YP_001271807.1 1263943 R 557436 CDS YP_001271808.1 148544438 5190029 complement(1264482..1264958) 1 NC_009513.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; transcription elongation factor GreA 1264958 5190029 Lreu_1214 Lactobacillus reuteri DSM 20016 transcription elongation factor GreA YP_001271808.1 1264482 R 557436 CDS YP_001271809.1 148544439 5189979 complement(1265022..1265678) 1 NC_009513.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 1265678 5189979 Lreu_1215 Lactobacillus reuteri DSM 20016 uridine kinase YP_001271809.1 1265022 R 557436 CDS YP_001271810.1 148544440 5190027 complement(1265791..1266429) 1 NC_009513.1 PFAM: NLP/P60 protein; Peptidoglycan-binding LysM; NLP/P60 protein 1266429 5190027 Lreu_1216 Lactobacillus reuteri DSM 20016 NLP/P60 protein YP_001271810.1 1265791 R 557436 CDS YP_001271811.1 148544441 5189427 complement(1266613..1269030) 1 NC_009513.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1269030 pheT 5189427 pheT Lactobacillus reuteri DSM 20016 phenylalanyl-tRNA synthetase subunit beta YP_001271811.1 1266613 R 557436 CDS YP_001271812.1 148544442 5190066 complement(1269037..1270083) 1 NC_009513.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1270083 pheS 5190066 pheS Lactobacillus reuteri DSM 20016 phenylalanyl-tRNA synthetase subunit alpha YP_001271812.1 1269037 R 557436 CDS YP_001271813.1 148544443 5189429 complement(1270378..1270716) 1 NC_009513.1 PFAM: helix-turn-helix, HxlR type; HxlR family transcriptional regulator 1270716 5189429 Lreu_1219 Lactobacillus reuteri DSM 20016 HxlR family transcriptional regulator YP_001271813.1 1270378 R 557436 CDS YP_001271814.1 148544444 5190091 complement(1270737..1271243) 1 NC_009513.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; metal dependent phosphohydrolase 1271243 5190091 Lreu_1220 Lactobacillus reuteri DSM 20016 metal dependent phosphohydrolase YP_001271814.1 1270737 R 557436 CDS YP_001271815.1 148544445 5190109 complement(1271308..1272084) 1 NC_009513.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; tRNA/rRNA methyltransferase SpoU 1272084 5190109 Lreu_1221 Lactobacillus reuteri DSM 20016 tRNA/rRNA methyltransferase SpoU YP_001271815.1 1271308 R 557436 CDS YP_001271816.1 148544446 5189411 1272183..1272458 1 NC_009513.1 PFAM: acylphosphatase; acylphosphatase 1272458 5189411 Lreu_1222 Lactobacillus reuteri DSM 20016 acylphosphatase YP_001271816.1 1272183 D 557436 CDS YP_001271817.1 148544447 5189369 1272557..1273507 1 NC_009513.1 PFAM: 60 kDa inner membrane insertion protein; 60 kDa inner membrane insertion protein 1273507 5189369 Lreu_1223 Lactobacillus reuteri DSM 20016 60 kDa inner membrane insertion protein YP_001271817.1 1272557 D 557436 CDS YP_001271818.1 148544448 5189597 1273571..1273981 1 NC_009513.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1273981 5189597 Lreu_1224 Lactobacillus reuteri DSM 20016 peptide deformylase YP_001271818.1 1273571 D 557436 CDS YP_001271819.1 148544449 5190082 1274120..1275439 1 NC_009513.1 PFAM: multi antimicrobial extrusion protein MatE; multi anti extrusion protein MatE 1275439 5190082 Lreu_1225 Lactobacillus reuteri DSM 20016 multi anti extrusion protein MatE YP_001271819.1 1274120 D 557436 CDS YP_001271820.1 148544450 5189623 complement(1275521..1277014) 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 1277014 5189623 Lreu_1226 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001271820.1 1275521 R 557436 CDS YP_001271821.1 148544451 5189681 complement(1277203..1278678) 1 NC_009513.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; integral membrane sensor signal transduction histidine kinase 1278678 5189681 Lreu_1227 Lactobacillus reuteri DSM 20016 integral membrane sensor signal transduction histidine kinase YP_001271821.1 1277203 R 557436 CDS YP_001271822.1 148544452 5190110 complement(1278691..1279377) 1 NC_009513.1 PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 1279377 5190110 Lreu_1228 Lactobacillus reuteri DSM 20016 two component transcriptional regulator YP_001271822.1 1278691 R 557436 CDS YP_001271823.1 148544453 5189614 complement(1279602..1279781) 1 NC_009513.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1279781 rpmF 5189614 rpmF Lactobacillus reuteri DSM 20016 50S ribosomal protein L32 YP_001271823.1 1279602 R 557436 CDS YP_001271824.1 148544454 5189660 complement(1279836..1280393) 1 NC_009513.1 PFAM: protein of unknown function DUF177; hypothetical protein 1280393 5189660 Lreu_1230 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271824.1 1279836 R 557436 CDS YP_001271825.1 148544455 5189796 complement(1280523..1281656) 1 NC_009513.1 PFAM: protein of unknown function DUF795; hypothetical protein 1281656 5189796 Lreu_1231 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271825.1 1280523 R 557436 CDS YP_001271826.1 148544456 5189435 complement(1281668..1282408) 1 NC_009513.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; type 12 methyltransferase 1282408 5189435 Lreu_1232 Lactobacillus reuteri DSM 20016 type 12 methyltransferase YP_001271826.1 1281668 R 557436 CDS YP_001271827.1 148544457 5189761 complement(1282408..1282764) 1 NC_009513.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; iojap family protein 1282764 5189761 Lreu_1233 Lactobacillus reuteri DSM 20016 iojap family protein YP_001271827.1 1282408 R 557436 CDS YP_001271828.1 148544458 5189245 complement(1282764..1283378) 1 NC_009513.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 1283378 5189245 Lreu_1234 Lactobacillus reuteri DSM 20016 metal dependent phosphohydrolase YP_001271828.1 1282764 R 557436 CDS YP_001271829.1 148544459 5188167 complement(1283371..1284015) 1 NC_009513.1 TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate-nucleotide adenylyltransferase 1284015 5188167 Lreu_1235 Lactobacillus reuteri DSM 20016 nicotinate-nucleotide adenylyltransferase YP_001271829.1 1283371 R 557436 CDS YP_001271830.1 148544460 5188344 complement(1284037..1284348) 1 NC_009513.1 PFAM: protein of unknown function UPF0044; hypothetical protein 1284348 5188344 Lreu_1236 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271830.1 1284037 R 557436 CDS YP_001271831.1 148544461 5189816 complement(1284372..1285499) 1 NC_009513.1 in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; GTP-binding protein YqeH 1285499 5189816 Lreu_1237 Lactobacillus reuteri DSM 20016 GTP-binding protein YqeH YP_001271831.1 1284372 R 557436 CDS YP_001271832.1 148544462 5189301 complement(1285492..1286022) 1 NC_009513.1 TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; HAD family phosphatase 1286022 5189301 Lreu_1238 Lactobacillus reuteri DSM 20016 HAD family phosphatase YP_001271832.1 1285492 R 557436 CDS YP_001271833.1 148544463 5188364 complement(1286176..1286529) 1 NC_009513.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1286529 rplT 5188364 rplT Lactobacillus reuteri DSM 20016 50S ribosomal protein L20 YP_001271833.1 1286176 R 557436 CDS YP_001271834.1 148544464 5189264 complement(1286574..1286771) 1 NC_009513.1 PFAM: ribosomal protein L35; 50S ribosomal protein L35 1286771 rpmI 5189264 rpmI Lactobacillus reuteri DSM 20016 50S ribosomal protein L35 YP_001271834.1 1286574 R 557436 CDS YP_001271835.1 148544465 5188509 complement(1286794..1287306) 1 NC_009513.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; translation initiation factor 3 1287306 5188509 Lreu_1241 Lactobacillus reuteri DSM 20016 translation initiation factor 3 YP_001271835.1 1286794 R 557436 CDS YP_001271836.1 148544466 5189313 complement(1287532..1288473) 1 NC_009513.1 PFAM: Primosomal DnaI domain protein; replicative DNA helicase loader DnaI 1288473 5189313 Lreu_1242 Lactobacillus reuteri DSM 20016 replicative DNA helicase loader DnaI YP_001271836.1 1287532 R 557436 CDS YP_001271837.1 148544467 5188650 complement(1288494..1289849) 1 NC_009513.1 PFAM: replication initiation and membrane attachment family protein; replicative DNA helicase loader DnaB 1289849 5188650 Lreu_1243 Lactobacillus reuteri DSM 20016 replicative DNA helicase loader DnaB YP_001271837.1 1288494 R 557436 CDS YP_001271838.1 148544468 5189340 complement(1289867..1290331) 1 NC_009513.1 PFAM: ATP-cone domain protein; transcriptional regulator NrdR 1290331 nrdR 5189340 nrdR Lactobacillus reuteri DSM 20016 transcriptional regulator NrdR YP_001271838.1 1289867 R 557436 CDS YP_001271839.1 148544469 5189184 complement(1290377..1290976) 1 NC_009513.1 TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 1290976 5189184 Lreu_1245 Lactobacillus reuteri DSM 20016 dephospho-CoA kinase YP_001271839.1 1290377 R 557436 CDS YP_001271840.1 148544470 5188382 complement(1290980..1291810) 1 NC_009513.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 1291810 5188382 Lreu_1246 Lactobacillus reuteri DSM 20016 formamidopyrimidine-DNA glycosylase YP_001271840.1 1290980 R 557436 CDS YP_001271841.1 148544471 5189274 complement(1291825..1294491) 1 NC_009513.1 TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; SMART: 3'-5' exonuclease; Helix-hairpin-helix domain protein, class 2; DNA polymerase I 1294491 5189274 Lreu_1247 Lactobacillus reuteri DSM 20016 DNA polymerase I YP_001271841.1 1291825 R 557436 CDS YP_001271842.1 148544472 5189176 1294614..1295288 1 NC_009513.1 PFAM: protein of unknown function DUF1275; hypothetical protein 1295288 5189176 Lreu_1248 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271842.1 1294614 D 557436 CDS YP_001271843.1 148544473 5189349 complement(1295347..1296060) 1 NC_009513.1 PFAM: protein of unknown function UPF0005; hypothetical protein 1296060 5189349 Lreu_1249 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271843.1 1295347 R 557436 CDS YP_001271844.1 148544474 5189251 complement(1296152..1297456) 1 NC_009513.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 1297456 murC 5189251 murC Lactobacillus reuteri DSM 20016 UDP-N-acetylmuramate--L-alanine ligase YP_001271844.1 1296152 R 557436 CDS YP_001271845.1 148544475 5189171 complement(1297583..1298230) 1 NC_009513.1 PFAM: t-RNA-binding domain protein; tRNA-binding domain-containing protein 1298230 5189171 Lreu_1251 Lactobacillus reuteri DSM 20016 tRNA-binding domain-containing protein YP_001271845.1 1297583 R 557436 CDS YP_001271846.1 148544476 5189169 complement(1298359..1298679) 1 NC_009513.1 PFAM: Thioredoxin domain; thioredoxin domain-containing protein 1298679 5189169 Lreu_1252 Lactobacillus reuteri DSM 20016 thioredoxin domain-containing protein YP_001271846.1 1298359 R 557436 CDS YP_001271847.1 148544477 5189094 1298844..1299182 1 NC_009513.1 small secreted protein-like protein 1299182 5189094 Lreu_1253 Lactobacillus reuteri DSM 20016 small secreted protein-like protein YP_001271847.1 1298844 D 557436 CDS YP_001271848.1 148544478 5188623 1299234..1300154 1 NC_009513.1 PFAM: glutaminase; L-glutaminase 1300154 5188623 Lreu_1254 Lactobacillus reuteri DSM 20016 L-glutaminase YP_001271848.1 1299234 D 557436 CDS YP_001271849.1 148544479 5188696 1300320..1301303 1 NC_009513.1 PFAM: aldo/keto reductase; aldo/keto reductase 1301303 5188696 Lreu_1255 Lactobacillus reuteri DSM 20016 aldo/keto reductase YP_001271849.1 1300320 D 557436 CDS YP_001271850.1 148544480 5188232 1301342..1302844 1 NC_009513.1 PFAM: glycosyl transferase, group 1; Protein of unknown function DUF1975; hypothetical protein 1302844 5188232 Lreu_1256 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271850.1 1301342 D 557436 CDS YP_001271851.1 148544481 5188319 complement(1302909..1304291) 1 NC_009513.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 1304291 5188319 Lreu_1257 Lactobacillus reuteri DSM 20016 RNA-directed DNA polymerase YP_001271851.1 1302909 R 557436 CDS YP_001271852.1 148544482 5188367 complement(1304799..1307036) 1 NC_009513.1 TIGRFAM: LPXTG-motif cell wall anchor domain; PFAM: surface protein from Gram-positive cocci, anchor region; PT repeat-containing protein; cell wall anchor domain-containing protein 1307036 5188367 Lreu_1258 Lactobacillus reuteri DSM 20016 cell wall anchor domain-containing protein YP_001271852.1 1304799 R 557436 CDS YP_001271853.1 148544483 5188597 complement(1307479..1308465) 1 NC_009513.1 PFAM: YSIRK Gram-positive signal peptide; hypothetical protein 1308465 5188597 Lreu_1259 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271853.1 1307479 R 557436 CDS YP_001271854.1 148544484 5188634 complement(1308697..1309338) 1 NC_009513.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 1309338 trmB 5188634 trmB Lactobacillus reuteri DSM 20016 tRNA (guanine-N(7)-)-methyltransferase YP_001271854.1 1308697 R 557436 CDS YP_001271855.1 148544485 5189154 complement(1309351..1310553) 1 NC_009513.1 PFAM: ABC transporter EcsB; ABC transporter EcsB 1310553 5189154 Lreu_1261 Lactobacillus reuteri DSM 20016 ABC transporter EcsB YP_001271855.1 1309351 R 557436 CDS YP_001271856.1 148544486 5189059 complement(1310546..1311283) 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 1311283 5189059 Lreu_1262 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001271856.1 1310546 R 557436 CDS YP_001271857.1 148544487 5189104 1311420..1311854 1 NC_009513.1 PFAM: histidine triad (HIT) protein; histidine triad (HIT) protein 1311854 5189104 Lreu_1263 Lactobacillus reuteri DSM 20016 histidine triad (HIT) protein YP_001271857.1 1311420 D 557436 CDS YP_001271858.1 148544488 5189159 1311857..1312087 1 NC_009513.1 hypothetical protein 1312087 5189159 Lreu_1264 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271858.1 1311857 D 557436 CDS YP_001271859.1 148544489 5189281 complement(1312264..1313202) 1 NC_009513.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1313202 5189281 Lreu_1265 Lactobacillus reuteri DSM 20016 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001271859.1 1312264 R 557436 CDS YP_001271860.1 148544490 5189194 complement(1313317..1315809) 1 NC_009513.1 hypothetical protein 1315809 5189194 Lreu_1266 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271860.1 1313317 R 557436 CDS YP_001271861.1 148544491 5189261 complement(1315813..1316997) 1 NC_009513.1 PFAM: metallophosphoesterase; metallophosphoesterase 1316997 5189261 Lreu_1267 Lactobacillus reuteri DSM 20016 metallophosphoesterase YP_001271861.1 1315813 R 557436 CDS YP_001271862.1 148544492 5190055 complement(1317077..1317448) 1 NC_009513.1 PFAM: protein of unknown function DUF964; hypothetical protein 1317448 5190055 Lreu_1268 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271862.1 1317077 R 557436 CDS YP_001271863.1 148544493 5189044 complement(1317497..1319662) 1 NC_009513.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; 1A family penicillin-binding protein 1319662 5189044 Lreu_1269 Lactobacillus reuteri DSM 20016 1A family penicillin-binding protein YP_001271863.1 1317497 R 557436 CDS YP_001271864.1 148544494 5189067 complement(1319830..1321518) 1 NC_009513.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1321518 argS 5189067 argS Lactobacillus reuteri DSM 20016 arginyl-tRNA synthetase YP_001271864.1 1319830 R 557436 CDS YP_001271865.1 148544495 5189248 1321879..1322694 1 NC_009513.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 1322694 5189248 Lreu_1271 Lactobacillus reuteri DSM 20016 phosphomethylpyrimidine kinase YP_001271865.1 1321879 D 557436 CDS YP_001271866.1 148544496 5188698 1322707..1323645 1 NC_009513.1 TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; malate dehydrogenase (NAD) 1323645 5188698 Lreu_1272 Lactobacillus reuteri DSM 20016 malate dehydrogenase (NAD) YP_001271866.1 1322707 D 557436 CDS YP_001271867.1 148544497 5189157 complement(1323831..1324103) 1 NC_009513.1 hypothetical protein 1324103 5189157 Lreu_1273 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271867.1 1323831 R 557436 CDS YP_001271868.1 148544498 5188709 1324245..1324580 1 NC_009513.1 hypothetical protein 1324580 5188709 Lreu_1274 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271868.1 1324245 D 557436 CDS YP_001271869.1 148544499 5188588 complement(1324546..1325709) 1 NC_009513.1 TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS; dihydropteroate synthase 1325709 5188588 Lreu_1275 Lactobacillus reuteri DSM 20016 dihydropteroate synthase YP_001271869.1 1324546 R 557436 CDS YP_001271870.1 148544500 5188169 complement(1325711..1326298) 1 NC_009513.1 PFAM: Ham1 family protein; Ham1 family protein 1326298 5188169 Lreu_1276 Lactobacillus reuteri DSM 20016 Ham1 family protein YP_001271870.1 1325711 R 557436 CDS YP_001271871.1 148544501 5188422 complement(1326288..1327547) 1 NC_009513.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase, middle domain protein; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 1327547 5188422 Lreu_1277 Lactobacillus reuteri DSM 20016 bifunctional folylpolyglutamate synthase/dihydrofolate synthase YP_001271871.1 1326288 R 557436 CDS YP_001271872.1 148544502 5189413 complement(1327534..1328112) 1 NC_009513.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1328112 folE 5189413 folE Lactobacillus reuteri DSM 20016 GTP cyclohydrolase I YP_001271872.1 1327534 R 557436 CDS YP_001271873.1 148544503 5190150 complement(1328094..1328606) 1 NC_009513.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1328606 5190150 Lreu_1279 Lactobacillus reuteri DSM 20016 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_001271873.1 1328094 R 557436 CDS YP_001271874.1 148544504 5188636 complement(1328609..1328944) 1 NC_009513.1 TIGRFAM: dihydroneopterin aldolase; dihydroneopterin aldolase 1328944 5188636 Lreu_1280 Lactobacillus reuteri DSM 20016 dihydroneopterin aldolase YP_001271874.1 1328609 R 557436 CDS YP_001271875.1 148544505 5189866 complement(1329032..1329427) 1 NC_009513.1 hypothetical protein 1329427 5189866 Lreu_1281 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271875.1 1329032 R 557436 CDS YP_001271876.1 148544506 5188607 complement(1329670..1329948) 1 NC_009513.1 hypothetical protein 1329948 5188607 Lreu_1282 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271876.1 1329670 R 557436 CDS YP_001271877.1 148544507 5188156 complement(1330292..1330969) 1 NC_009513.1 PFAM: Abortive infection protein; abortive infection protein 1330969 5188156 Lreu_1283 Lactobacillus reuteri DSM 20016 abortive infection protein YP_001271877.1 1330292 R 557436 CDS YP_001271878.1 148544508 5188534 complement(1330953..1331198) 1 NC_009513.1 hypothetical protein 1331198 5188534 Lreu_1284 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271878.1 1330953 R 557436 CDS YP_001271879.1 148544509 5188663 complement(1331315..1332238) 1 NC_009513.1 TIGRFAM: ribokinase; PFAM: PfkB domain protein; ribokinase 1332238 5188663 Lreu_1285 Lactobacillus reuteri DSM 20016 ribokinase YP_001271879.1 1331315 R 557436 CDS YP_001271880.1 148544510 5188635 complement(1332295..1333311) 1 NC_009513.1 PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 1333311 5188635 Lreu_1286 Lactobacillus reuteri DSM 20016 LacI family transcriptional regulator YP_001271880.1 1332295 R 557436 CDS YP_001271881.1 148544511 5188223 complement(1333393..1334001) 1 NC_009513.1 hypothetical protein 1334001 5188223 Lreu_1287 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271881.1 1333393 R 557436 CDS YP_001271882.1 148544512 5189903 1334217..1334849 1 NC_009513.1 PFAM: deoxynucleoside kinase; deoxyadenosine kinase 1334849 5189903 Lreu_1288 Lactobacillus reuteri DSM 20016 deoxyadenosine kinase YP_001271882.1 1334217 D 557436 CDS YP_001271883.1 148544513 5188272 complement(1334884..1335930) 1 NC_009513.1 PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase 1335930 5188272 Lreu_1289 Lactobacillus reuteri DSM 20016 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase YP_001271883.1 1334884 R 557436 CDS YP_001271884.1 148544514 5188297 complement(1336020..1336517) 1 NC_009513.1 PFAM: UspA domain protein; UspA domain-containing protein 1336517 5188297 Lreu_1290 Lactobacillus reuteri DSM 20016 UspA domain-containing protein YP_001271884.1 1336020 R 557436 CDS YP_001271885.1 148544515 5188343 complement(1336558..1337961) 1 NC_009513.1 divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases; dipeptidase PepV 1337961 5188343 Lreu_1291 Lactobacillus reuteri DSM 20016 dipeptidase PepV YP_001271885.1 1336558 R 557436 CDS YP_001271886.1 148544516 5188390 1338050..1338910 1 NC_009513.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; carbohydrate kinase 1338910 5188390 Lreu_1292 Lactobacillus reuteri DSM 20016 carbohydrate kinase YP_001271886.1 1338050 D 557436 CDS YP_001271887.1 148544517 5188574 complement(1338974..1340623) 1 NC_009513.1 PFAM: polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1340623 5188574 Lreu_1293 Lactobacillus reuteri DSM 20016 polysaccharide biosynthesis protein YP_001271887.1 1338974 R 557436 CDS YP_001271888.1 148544518 5188350 complement(1340738..1341001) 1 NC_009513.1 PFAM: protein of unknown function UPF0150; hypothetical protein 1341001 5188350 Lreu_1294 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271888.1 1340738 R 557436 CDS YP_001271889.1 148544519 5188374 complement(1341066..1343486) 1 NC_009513.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 1343486 leuS 5188374 leuS Lactobacillus reuteri DSM 20016 leucyl-tRNA synthetase YP_001271889.1 1341066 R 557436 CDS YP_001271890.1 148544520 5188403 complement(1343808..1344995) 1 NC_009513.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 1344995 5188403 Lreu_1296 Lactobacillus reuteri DSM 20016 S-adenosylmethionine synthetase YP_001271890.1 1343808 R 557436 CDS YP_001271891.1 148544521 5189656 complement(1345156..1345695) 1 NC_009513.1 PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I 1345695 5189656 Lreu_1297 Lactobacillus reuteri DSM 20016 DNA-3-methyladenine glycosylase I YP_001271891.1 1345156 R 557436 CDS YP_001271892.1 148544522 5188523 complement(1345718..1345915) 1 NC_009513.1 hypothetical protein 1345915 5188523 Lreu_1298 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271892.1 1345718 R 557436 CDS YP_001271893.1 148544523 5188423 complement(1346118..1347557) 1 NC_009513.1 PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter 1347557 5188423 Lreu_1299 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001271893.1 1346118 R 557436 CDS YP_001271894.1 148544524 5188444 1347681..1348136 1 NC_009513.1 PFAM: ferric-uptake regulator; ferric uptake regulator family protein 1348136 5188444 Lreu_1300 Lactobacillus reuteri DSM 20016 ferric uptake regulator family protein YP_001271894.1 1347681 D 557436 CDS YP_001271895.1 148544525 5188334 complement(1348168..1349514) 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 1349514 5188334 Lreu_1301 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001271895.1 1348168 R 557436 CDS YP_001271896.1 148544526 5188466 1349605..1350216 1 NC_009513.1 PFAM: VanZ family protein; VanZ family protein 1350216 5188466 Lreu_1302 Lactobacillus reuteri DSM 20016 VanZ family protein YP_001271896.1 1349605 D 557436 CDS YP_001271897.1 148544527 5188282 1350228..1350395 1 NC_009513.1 hypothetical protein 1350395 5188282 Lreu_1303 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271897.1 1350228 D 557436 CDS YP_001271898.1 148544528 5188885 1350563..1351087 1 NC_009513.1 hypothetical protein 1351087 5188885 Lreu_1304 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271898.1 1350563 D 557436 CDS YP_001271899.1 148544529 5188617 complement(1351111..1351554) 1 NC_009513.1 hypothetical protein 1351554 5188617 Lreu_1305 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271899.1 1351111 R 557436 CDS YP_001271900.1 148544530 5188544 complement(1351554..1353056) 1 NC_009513.1 PFAM: UMUC domain protein DNA-repair protein; DNA-repair protein 1353056 5188544 Lreu_1306 Lactobacillus reuteri DSM 20016 DNA-repair protein YP_001271900.1 1351554 R 557436 CDS YP_001271901.1 148544531 5189292 complement(1353183..1353614) 1 NC_009513.1 PFAM: heat shock protein Hsp20; heat shock protein Hsp20 1353614 5189292 Lreu_1307 Lactobacillus reuteri DSM 20016 heat shock protein Hsp20 YP_001271901.1 1353183 R 557436 CDS YP_001271902.1 148544532 5189300 1353747..1354595 1 NC_009513.1 PFAM: aldo/keto reductase; aldo/keto reductase 1354595 5189300 Lreu_1308 Lactobacillus reuteri DSM 20016 aldo/keto reductase YP_001271902.1 1353747 D 557436 CDS YP_001271903.1 148544533 5188208 complement(1354693..1355991) 1 NC_009513.1 catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines; dihydropyrimidine dehydrogenase 1355991 5188208 Lreu_1309 Lactobacillus reuteri DSM 20016 dihydropyrimidine dehydrogenase YP_001271903.1 1354693 R 557436 CDS YP_001271904.1 148544534 5189101 complement(1355984..1357225) 1 NC_009513.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 1357225 5189101 Lreu_1310 Lactobacillus reuteri DSM 20016 oxidoreductase YP_001271904.1 1355984 R 557436 CDS YP_001271905.1 148544535 5188677 1357521..1358282 1 NC_009513.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth 1358282 5188677 Lreu_1311 Lactobacillus reuteri DSM 20016 exodeoxyribonuclease III Xth YP_001271905.1 1357521 D 557436 CDS YP_001271906.1 148544536 5188614 complement(1358404..1359111) 1 NC_009513.1 PFAM: Peptidoglycan-binding LysM; peptidoglycan-binding LysM 1359111 5188614 Lreu_1312 Lactobacillus reuteri DSM 20016 peptidoglycan-binding LysM YP_001271906.1 1358404 R 557436 CDS YP_001271907.1 148544537 5188389 complement(1359440..1361140) 1 NC_009513.1 hypothetical protein 1361140 5188389 Lreu_1313 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271907.1 1359440 R 557436 CDS YP_001271908.1 148544538 5188658 complement(1361295..1362056) 1 NC_009513.1 PFAM: Peptidoglycan-binding LysM; peptidoglycan-binding LysM 1362056 5188658 Lreu_1314 Lactobacillus reuteri DSM 20016 peptidoglycan-binding LysM YP_001271908.1 1361295 R 557436 CDS YP_001271909.1 148544539 5188179 complement(1362441..1363331) 1 NC_009513.1 hypothetical protein 1363331 5188179 Lreu_1315 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271909.1 1362441 R 557436 CDS YP_001271910.1 148544540 5188664 complement(1363343..1363921) 1 NC_009513.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; ribonucleoside-triphosphate reductase class III activase subunit 1363921 5188664 Lreu_1316 Lactobacillus reuteri DSM 20016 ribonucleoside-triphosphate reductase class III activase subunit YP_001271910.1 1363343 R 557436 CDS YP_001271911.1 148544541 5188416 complement(1363987..1366221) 1 NC_009513.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 1366221 5188416 Lreu_1317 Lactobacillus reuteri DSM 20016 anaerobic ribonucleoside triphosphate reductase YP_001271911.1 1363987 R 557436 CDS YP_001271912.1 148544542 5188307 1366627..1368024 1 NC_009513.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA family drug resistance transporter 1368024 5188307 Lreu_1318 Lactobacillus reuteri DSM 20016 EmrB/QacA family drug resistance transporter YP_001271912.1 1366627 D 557436 CDS YP_001271913.1 148544543 5188625 complement(1368062..1368616) 1 NC_009513.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1368616 5188625 Lreu_1319 Lactobacillus reuteri DSM 20016 N-acetyltransferase GCN5 YP_001271913.1 1368062 R 557436 CDS YP_001271914.1 148544544 5190113 complement(1375411..1375659) 1 NC_009513.1 hypothetical protein 1375659 5190113 Lreu_1320 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271914.1 1375411 R 557436 CDS YP_001271915.1 148544545 5188354 complement(1375717..1376730) 1 NC_009513.1 PFAM: conserved hypothetical protein 374; hypothetical protein 1376730 5188354 Lreu_1321 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271915.1 1375717 R 557436 CDS YP_001271916.1 148544546 5188150 complement(1376730..1377758) 1 NC_009513.1 PFAM: glycosyl transferase, group 1; group 1 glycosyl transferase 1377758 5188150 Lreu_1322 Lactobacillus reuteri DSM 20016 group 1 glycosyl transferase YP_001271916.1 1376730 R 557436 CDS YP_001271917.1 148544547 5189102 complement(1377761..1378978) 1 NC_009513.1 PFAM: glycosyl transferase, group 1; 1,2-diacylglycerol 3-glucosyltransferase 1378978 5189102 Lreu_1323 Lactobacillus reuteri DSM 20016 1,2-diacylglycerol 3-glucosyltransferase YP_001271917.1 1377761 R 557436 CDS YP_001271918.1 148544548 5188151 complement(1379212..1380942) 1 NC_009513.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein, mobile region; PEP-utilising protein domain protein; phosphoenolpyruvate--protein phosphotransferase 1380942 5188151 Lreu_1324 Lactobacillus reuteri DSM 20016 phosphoenolpyruvate--protein phosphotransferase YP_001271918.1 1379212 R 557436 CDS YP_001271919.1 148544549 5189235 complement(1380942..1381208) 1 NC_009513.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; phosphocarrier protein HPr 1381208 5189235 Lreu_1325 Lactobacillus reuteri DSM 20016 phosphocarrier protein HPr YP_001271919.1 1380942 R 557436 CDS YP_001271920.1 148544550 5188202 complement(1381330..1381515) 1 NC_009513.1 hypothetical protein 1381515 5188202 Lreu_1326 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271920.1 1381330 R 557436 CDS YP_001271921.1 148544551 5188270 1381791..1383995 1 NC_009513.1 PFAM: UvrB/UvrC protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATPase 1383995 5188270 Lreu_1327 Lactobacillus reuteri DSM 20016 ATPase YP_001271921.1 1381791 D 557436 CDS YP_001271922.1 148544552 5188512 complement(1384046..1384654) 1 NC_009513.1 hypothetical protein 1384654 5188512 Lreu_1328 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271922.1 1384046 R 557436 CDS YP_001271923.1 148544553 5188457 1384804..1385529 1 NC_009513.1 hypothetical protein 1385529 5188457 Lreu_1329 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271923.1 1384804 D 557436 CDS YP_001271924.1 148544554 5188244 complement(1385660..1386346) 1 NC_009513.1 hypothetical protein 1386346 5188244 Lreu_1330 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271924.1 1385660 R 557436 CDS YP_001271925.1 148544555 5189178 complement(1386346..1387209) 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 1387209 5189178 Lreu_1331 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001271925.1 1386346 R 557436 CDS YP_001271926.1 148544556 5189103 complement(1387190..1387573) 1 NC_009513.1 PFAM: regulatory protein GntR, HTH; GntR family transcriptional regulator 1387573 5189103 Lreu_1332 Lactobacillus reuteri DSM 20016 GntR family transcriptional regulator YP_001271926.1 1387190 R 557436 CDS YP_001271927.1 148544557 5189196 complement(1387737..1388711) 1 NC_009513.1 hypothetical protein 1388711 5189196 Lreu_1333 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271927.1 1387737 R 557436 CDS YP_001271928.1 148544558 5189143 complement(1388645..1390087) 1 NC_009513.1 PFAM: glycosyl hydrolase 53 domain protein; glycosyl hydrolase 53 protein 1390087 5189143 Lreu_1334 Lactobacillus reuteri DSM 20016 glycosyl hydrolase 53 protein YP_001271928.1 1388645 R 557436 CDS YP_001271929.1 148544559 5188226 complement(1390653..1391207) 1 NC_009513.1 PFAM: cell wall binding repeat-containing protein; cell wall binding repeat-containing protein 1391207 5188226 Lreu_1336 Lactobacillus reuteri DSM 20016 cell wall binding repeat-containing protein YP_001271929.1 1390653 R 557436 CDS YP_001271930.1 148544560 5188174 complement(1392265..1393116) 1 NC_009513.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 1393116 5188174 Lreu_1339 Lactobacillus reuteri DSM 20016 integrase catalytic subunit YP_001271930.1 1392265 R 557436 CDS YP_001271931.1 148544561 5188507 complement(1395628..1395975) 1 NC_009513.1 hypothetical protein 1395975 5188507 Lreu_1342 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271931.1 1395628 R 557436 CDS YP_001271932.1 148544562 5188497 complement(1395975..1396535) 1 NC_009513.1 PFAM: transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 1396535 5188497 Lreu_1343 Lactobacillus reuteri DSM 20016 transposase IS3/IS911 family protein YP_001271932.1 1395975 R 557436 CDS YP_001271933.1 148544563 5189330 1396605..1397234 1 NC_009513.1 IS30 family transposase 1397234 5189330 Lreu_1344 Lactobacillus reuteri DSM 20016 IS30 family transposase YP_001271933.1 1396605 D 557436 CDS YP_001271934.1 148544564 5188643 complement(1397706..1401797) 1 NC_009513.1 PFAM: cell wall binding repeat-containing protein; glycoside hydrolase, family 70; dextransucrase 1401797 5188643 Lreu_1346 Lactobacillus reuteri DSM 20016 dextransucrase YP_001271934.1 1397706 R 557436 CDS YP_001271935.1 148544565 5189318 complement(1402329..1403210) 1 NC_009513.1 PFAM: NLP/P60 protein; cell wall binding repeat-containing protein; NLP/P60 protein 1403210 5189318 Lreu_1348 Lactobacillus reuteri DSM 20016 NLP/P60 protein YP_001271935.1 1402329 R 557436 CDS YP_001271936.1 148544566 5189058 complement(1403361..1404734) 1 NC_009513.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 1404734 5189058 Lreu_1349 Lactobacillus reuteri DSM 20016 RNA-directed DNA polymerase YP_001271936.1 1403361 R 557436 CDS YP_001271937.1 148544567 5189078 1405386..1405844 1 NC_009513.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 1405844 5189078 Lreu_1350 Lactobacillus reuteri DSM 20016 transposase IS200-family protein YP_001271937.1 1405386 D 557436 CDS YP_001271938.1 148544568 5188511 complement(1406017..1407594) 1 NC_009513.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 1407594 prfC 5188511 prfC Lactobacillus reuteri DSM 20016 peptide chain release factor 3 YP_001271938.1 1406017 R 557436 CDS YP_001271939.1 148544569 5189181 1407781..1409247 1 NC_009513.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; cell envelope-related transcriptional attenuator 1409247 5189181 Lreu_1352 Lactobacillus reuteri DSM 20016 cell envelope-related transcriptional attenuator YP_001271939.1 1407781 D 557436 CDS YP_001271940.1 148544570 5189134 complement(1409291..1410859) 1 NC_009513.1 hypothetical protein 1410859 5189134 Lreu_1353 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271940.1 1409291 R 557436 CDS YP_001271941.1 148544571 5188338 complement(1410843..1411970) 1 NC_009513.1 PFAM: protein of unknown function UPF0118; hypothetical protein 1411970 5188338 Lreu_1354 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271941.1 1410843 R 557436 CDS YP_001271942.1 148544572 5188602 complement(1412079..1413677) 1 NC_009513.1 hypothetical protein 1413677 5188602 Lreu_1355 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271942.1 1412079 R 557436 CDS YP_001271943.1 148544573 5189005 complement(1413861..1415069) 1 NC_009513.1 hypothetical protein 1415069 5189005 Lreu_1356 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271943.1 1413861 R 557436 CDS YP_001271944.1 148544574 5188259 1415299..1415931 1 NC_009513.1 IS30 family transposase 1415931 5188259 Lreu_1357 Lactobacillus reuteri DSM 20016 IS30 family transposase YP_001271944.1 1415299 D 557436 CDS YP_001271945.1 148544575 5188207 1416319..1416918 1 NC_009513.1 hypothetical protein 1416918 5188207 Lreu_1358 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271945.1 1416319 D 557436 CDS YP_001271946.1 148544576 5188560 complement(1417782..1418519) 1 NC_009513.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; IstB ATP binding domain-containing protein 1418519 5188560 Lreu_1360 Lactobacillus reuteri DSM 20016 IstB ATP binding domain-containing protein YP_001271946.1 1417782 R 557436 CDS YP_001271947.1 148544577 5188373 complement(1418521..1419750) 1 NC_009513.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 1419750 5188373 Lreu_1361 Lactobacillus reuteri DSM 20016 integrase catalytic subunit YP_001271947.1 1418521 R 557436 CDS YP_001271948.1 148544578 5188432 complement(1420249..1421223) 1 NC_009513.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 1421223 5188432 Lreu_1362 Lactobacillus reuteri DSM 20016 glycosyl transferase family protein YP_001271948.1 1420249 R 557436 CDS YP_001271949.1 148544579 5188371 complement(1421336..1421905) 1 NC_009513.1 hypothetical protein 1421905 5188371 Lreu_1363 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271949.1 1421336 R 557436 CDS YP_001271950.1 148544580 5188191 complement(1421973..1423235) 1 NC_009513.1 PFAM: NLP/P60 protein; NLP/P60 protein 1423235 5188191 Lreu_1364 Lactobacillus reuteri DSM 20016 NLP/P60 protein YP_001271950.1 1421973 R 557436 CDS YP_001271951.1 148544581 5188653 complement(1423515..1425059) 1 NC_009513.1 PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramoyl-L-alanine amidase 1425059 5188653 Lreu_1365 Lactobacillus reuteri DSM 20016 N-acetylmuramoyl-L-alanine amidase YP_001271951.1 1423515 R 557436 CDS YP_001271952.1 148544582 5188241 complement(1425439..1425897) 1 NC_009513.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 1425897 5188241 Lreu_1366 Lactobacillus reuteri DSM 20016 transposase IS200-family protein YP_001271952.1 1425439 R 557436 CDS YP_001271953.1 148544583 5188327 complement(1426106..1427530) 1 NC_009513.1 PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase 1427530 5188327 Lreu_1367 Lactobacillus reuteri DSM 20016 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase YP_001271953.1 1426106 R 557436 CDS YP_001271954.1 148544584 5189307 complement(1427696..1428763) 1 NC_009513.1 PFAM: acyltransferase 3; acyltransferase 3 1428763 5189307 Lreu_1368 Lactobacillus reuteri DSM 20016 acyltransferase 3 YP_001271954.1 1427696 R 557436 CDS YP_001271955.1 148544585 5189266 complement(1428775..1429791) 1 NC_009513.1 hypothetical protein 1429791 5189266 Lreu_1369 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271955.1 1428775 R 557436 CDS YP_001271956.1 148544586 5188375 complement(1429806..1430855) 1 NC_009513.1 PFAM: glycosyl transferase, group 1; UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase 1430855 5188375 Lreu_1370 Lactobacillus reuteri DSM 20016 UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase YP_001271956.1 1429806 R 557436 CDS YP_001271957.1 148544587 5188377 complement(1430872..1432290) 1 NC_009513.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; polysaccharide biosynthesis protein 1432290 5188377 Lreu_1371 Lactobacillus reuteri DSM 20016 polysaccharide biosynthesis protein YP_001271957.1 1430872 R 557436 CDS YP_001271958.1 148544588 5189334 complement(1432493..1433122) 1 NC_009513.1 PFAM: lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 1433122 5189334 Lreu_1372 Lactobacillus reuteri DSM 20016 lipopolysaccharide biosynthesis protein YP_001271958.1 1432493 R 557436 CDS YP_001271959.1 148544589 5188719 complement(1433119..1434315) 1 NC_009513.1 hypothetical protein 1434315 5188719 Lreu_1373 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271959.1 1433119 R 557436 CDS YP_001271960.1 148544590 5189105 complement(1434533..1435651) 1 NC_009513.1 PFAM: UDP-galactopyranose mutase; UDP-galactopyranose mutase 1435651 5189105 Lreu_1374 Lactobacillus reuteri DSM 20016 UDP-galactopyranose mutase YP_001271960.1 1434533 R 557436 CDS YP_001271961.1 148544591 5188360 complement(1435677..1436324) 1 NC_009513.1 PFAM: sugar transferase; undecaprenyl-phosphate galactose phosphotransferase 1436324 5188360 Lreu_1375 Lactobacillus reuteri DSM 20016 undecaprenyl-phosphate galactose phosphotransferase YP_001271961.1 1435677 R 557436 CDS YP_001271962.1 148544592 5189061 complement(1436336..1437265) 1 NC_009513.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 1437265 5189061 Lreu_1376 Lactobacillus reuteri DSM 20016 glycosyl transferase family protein YP_001271962.1 1436336 R 557436 CDS YP_001271963.1 148544593 5188216 complement(1437283..1438050) 1 NC_009513.1 hypothetical protein 1438050 5188216 Lreu_1377 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271963.1 1437283 R 557436 CDS YP_001271964.1 148544594 5188219 complement(1438125..1438919) 1 NC_009513.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 1438919 recX 5188219 recX Lactobacillus reuteri DSM 20016 recombination regulator RecX YP_001271964.1 1438125 R 557436 CDS YP_001271965.1 148544595 5188236 1439021..1439236 1 NC_009513.1 hypothetical protein 1439236 5188236 Lreu_1379 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271965.1 1439021 D 557436 CDS YP_001271966.1 148544596 5188424 1439258..1439485 1 NC_009513.1 hypothetical protein 1439485 5188424 Lreu_1380 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271966.1 1439258 D 557436 CDS YP_001271967.1 148544597 5188656 complement(1439536..1440426) 1 NC_009513.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; ribonuclease BN 1440426 5188656 Lreu_1381 Lactobacillus reuteri DSM 20016 ribonuclease BN YP_001271967.1 1439536 R 557436 CDS YP_001271968.1 148544598 5189267 complement(1440758..1442263) 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 1442263 5189267 Lreu_1382 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001271968.1 1440758 R 557436 CDS YP_001271969.1 148544599 5188278 1442594..1444015 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 1444015 5188278 Lreu_1383 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001271969.1 1442594 D 557436 CDS YP_001271970.1 148544600 5190080 1444031..1445152 1 NC_009513.1 associated with arginine deiminase pathway genes; probably functions in arginine catabolism; transaminase 1445152 5190080 Lreu_1384 Lactobacillus reuteri DSM 20016 transaminase YP_001271970.1 1444031 D 557436 CDS YP_001271971.1 148544601 5188670 complement(1445215..1446072) 1 NC_009513.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 1446072 5188670 Lreu_1385 Lactobacillus reuteri DSM 20016 methionine aminopeptidase YP_001271971.1 1445215 R 557436 CDS YP_001271972.1 148544602 5190009 1446186..1446644 1 NC_009513.1 TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; flavodoxin 1446644 5190009 Lreu_1386 Lactobacillus reuteri DSM 20016 flavodoxin YP_001271972.1 1446186 D 557436 CDS YP_001271973.1 148544603 5189706 1446637..1447074 1 NC_009513.1 PFAM: GtrA family protein; GtrA family protein 1447074 5189706 Lreu_1387 Lactobacillus reuteri DSM 20016 GtrA family protein YP_001271973.1 1446637 D 557436 CDS YP_001271974.1 148544604 5188421 1447169..1447483 1 NC_009513.1 hypothetical protein 1447483 5188421 Lreu_1388 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271974.1 1447169 D 557436 CDS YP_001271975.1 148544605 5188495 complement(1447681..1448802) 1 NC_009513.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 1448802 5188495 Lreu_1389 Lactobacillus reuteri DSM 20016 UDP-N-acetylglucosamine 2-epimerase YP_001271975.1 1447681 R 557436 CDS YP_001271976.1 148544606 5188471 complement(1449014..1450315) 1 NC_009513.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; DEAD/DEAH box helicase 1450315 5188471 Lreu_1390 Lactobacillus reuteri DSM 20016 DEAD/DEAH box helicase YP_001271976.1 1449014 R 557436 CDS YP_001271977.1 148544607 5188255 complement(1450327..1451346) 1 NC_009513.1 PFAM: oxidoreductase domain protein; oxidoreductase domain-containing protein 1451346 5188255 Lreu_1391 Lactobacillus reuteri DSM 20016 oxidoreductase domain-containing protein YP_001271977.1 1450327 R 557436 CDS YP_001271978.1 148544608 5189113 1451507..1451869 1 NC_009513.1 hypothetical protein 1451869 5189113 Lreu_1392 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271978.1 1451507 D 557436 CDS YP_001271979.1 148544609 5189186 complement(1451901..1452488) 1 NC_009513.1 PFAM: conserved hypothetical protein 730; hypothetical protein 1452488 5189186 Lreu_1393 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271979.1 1451901 R 557436 CDS YP_001271980.1 148544610 5188657 complement(1452493..1453416) 1 NC_009513.1 PFAM: Lactate/malate dehydrogenase; malate dehydrogenase (NAD) 1453416 5188657 Lreu_1394 Lactobacillus reuteri DSM 20016 malate dehydrogenase (NAD) YP_001271980.1 1452493 R 557436 CDS YP_001271981.1 148544611 5188565 complement(1453523..1455052) 1 NC_009513.1 glutamate--cysteine ligase 1455052 5188565 Lreu_1395 Lactobacillus reuteri DSM 20016 glutamate--cysteine ligase YP_001271981.1 1453523 R 557436 CDS YP_001271982.1 148544612 5188529 complement(1455189..1456220) 1 NC_009513.1 hypothetical protein 1456220 5188529 Lreu_1396 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271982.1 1455189 R 557436 CDS YP_001271983.1 148544613 5188205 complement(1456210..1456665) 1 NC_009513.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1456665 5188205 Lreu_1397 Lactobacillus reuteri DSM 20016 N-acetyltransferase GCN5 YP_001271983.1 1456210 R 557436 CDS YP_001271984.1 148544614 5188513 1456802..1457509 1 NC_009513.1 PFAM: protein of unknown function UPF0005; hypothetical protein 1457509 5188513 Lreu_1398 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271984.1 1456802 D 557436 CDS YP_001271985.1 148544615 5188357 complement(1457561..1458115) 1 NC_009513.1 hypothetical protein 1458115 5188357 Lreu_1399 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271985.1 1457561 R 557436 CDS YP_001271986.1 148544616 5188275 complement(1458176..1458688) 1 NC_009513.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1458688 5188275 Lreu_1400 Lactobacillus reuteri DSM 20016 N-acetyltransferase GCN5 YP_001271986.1 1458176 R 557436 CDS YP_001271987.1 148544617 5188342 1458835..1459269 1 NC_009513.1 PFAM: LytTr DNA-binding region; response regulator receiver protein 1459269 5188342 Lreu_1401 Lactobacillus reuteri DSM 20016 response regulator receiver protein YP_001271987.1 1458835 D 557436 CDS YP_001271988.1 148544618 5189291 1459266..1459712 1 NC_009513.1 hypothetical protein 1459712 5189291 Lreu_1402 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271988.1 1459266 D 557436 CDS YP_001271989.1 148544619 5188596 complement(1459721..1460644) 1 NC_009513.1 PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramoyl-L-alanine amidase 1460644 5188596 Lreu_1403 Lactobacillus reuteri DSM 20016 N-acetylmuramoyl-L-alanine amidase YP_001271989.1 1459721 R 557436 CDS YP_001271990.1 148544620 5188686 1460896..1461333 1 NC_009513.1 coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein 1461333 5188686 Lreu_1404 Lactobacillus reuteri DSM 20016 coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein YP_001271990.1 1460896 D 557436 CDS YP_001271991.1 148544621 5189236 complement(1461474..1462199) 1 NC_009513.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase, IS605 OrfB; IS605 family transposase OrfB 1462199 5189236 Lreu_1405 Lactobacillus reuteri DSM 20016 IS605 family transposase OrfB YP_001271991.1 1461474 R 557436 CDS YP_001271992.1 148544622 5188718 1462326..1462502 1 NC_009513.1 hypothetical protein 1462502 5188718 Lreu_1406 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271992.1 1462326 D 557436 CDS YP_001271993.1 148544623 5189282 complement(1462557..1463015) 1 NC_009513.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; methylated-DNA--protein-cysteine methyltransferase 1463015 5189282 Lreu_1407 Lactobacillus reuteri DSM 20016 methylated-DNA--protein-cysteine methyltransferase YP_001271993.1 1462557 R 557436 CDS YP_001271994.1 148544624 5189043 complement(1463030..1463683) 1 NC_009513.1 PFAM: nitroreductase; nitroreductase 1463683 5189043 Lreu_1408 Lactobacillus reuteri DSM 20016 nitroreductase YP_001271994.1 1463030 R 557436 CDS YP_001271995.1 148544625 5189183 complement(1463767..1464306) 1 NC_009513.1 hypothetical protein 1464306 5189183 Lreu_1409 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271995.1 1463767 R 557436 CDS YP_001271996.1 148544626 5188929 complement(1464377..1464859) 1 NC_009513.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1464859 5188929 Lreu_1410 Lactobacillus reuteri DSM 20016 N-acetyltransferase GCN5 YP_001271996.1 1464377 R 557436 CDS YP_001271997.1 148544627 5188539 complement(1465004..1466329) 1 NC_009513.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1466329 5188539 Lreu_1411 Lactobacillus reuteri DSM 20016 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001271997.1 1465004 R 557436 CDS YP_001271998.1 148544628 5188520 1466561..1467742 1 NC_009513.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; ammonium transporter 1467742 5188520 Lreu_1412 Lactobacillus reuteri DSM 20016 ammonium transporter YP_001271998.1 1466561 D 557436 CDS YP_001271999.1 148544629 5189115 1467908..1468348 1 NC_009513.1 hypothetical protein 1468348 5189115 Lreu_1413 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001271999.1 1467908 D 557436 CDS YP_001272000.1 148544630 5188680 complement(1468872..1469318) 1 NC_009513.1 hypothetical protein 1469318 5188680 Lreu_1414 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272000.1 1468872 R 557436 CDS YP_001272001.1 148544631 5188537 complement(1469388..1469975) 1 NC_009513.1 hypothetical protein 1469975 5188537 Lreu_1415 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272001.1 1469388 R 557436 CDS YP_001272002.1 148544632 5188525 complement(1470158..1472920) 1 NC_009513.1 PFAM: type III restriction protein, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; type III restriction protein, res subunit 1472920 5188525 Lreu_1416 Lactobacillus reuteri DSM 20016 type III restriction protein, res subunit YP_001272002.1 1470158 R 557436 CDS YP_001272003.1 148544633 5189071 complement(1472991..1473305) 1 NC_009513.1 hypothetical protein 1473305 5189071 Lreu_1417 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272003.1 1472991 R 557436 CDS YP_001272004.1 148544634 5188501 1473596..1474447 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 1474447 5188501 Lreu_1418 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001272004.1 1473596 D 557436 CDS YP_001272005.1 148544635 5189310 1474449..1475300 1 NC_009513.1 hypothetical protein 1475300 5189310 Lreu_1419 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272005.1 1474449 D 557436 CDS YP_001272006.1 148544636 5188395 1475303..1475755 1 NC_009513.1 PFAM: LytTr DNA-binding region; response regulator receiver protein 1475755 5188395 Lreu_1420 Lactobacillus reuteri DSM 20016 response regulator receiver protein YP_001272006.1 1475303 D 557436 CDS YP_001272007.1 148544637 5188391 1475757..1476143 1 NC_009513.1 hypothetical protein 1476143 5188391 Lreu_1421 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272007.1 1475757 D 557436 CDS YP_001272008.1 148544638 5189016 complement(1476565..1477536) 1 NC_009513.1 PFAM: plasmid pRiA4b ORF-3 family protein; plasmid pRiA4b ORF-3 family protein 1477536 5189016 Lreu_1422 Lactobacillus reuteri DSM 20016 plasmid pRiA4b ORF-3 family protein YP_001272008.1 1476565 R 557436 CDS YP_001272009.1 148544639 5188464 complement(1477581..1478111) 1 NC_009513.1 hypothetical protein 1478111 5188464 Lreu_1423 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272009.1 1477581 R 557436 CDS YP_001272010.1 148544640 5188473 complement(1478989..1479627) 1 NC_009513.1 PFAM: cyclic nucleotide-binding; regulatory protein, Crp; CRP/FNR family transcriptional regulator 1479627 5188473 Lreu_1425 Lactobacillus reuteri DSM 20016 CRP/FNR family transcriptional regulator YP_001272010.1 1478989 R 557436 CDS YP_001272011.1 148544641 5188372 complement(1479652..1480197) 1 NC_009513.1 hypothetical protein 1480197 5188372 Lreu_1426 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272011.1 1479652 R 557436 CDS YP_001272012.1 148544642 5188608 complement(1480190..1480426) 1 NC_009513.1 PFAM: Heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 1480426 5188608 Lreu_1427 Lactobacillus reuteri DSM 20016 heavy metal transport/detoxification protein YP_001272012.1 1480190 R 557436 CDS YP_001272013.1 148544643 5188433 complement(1482944..1484326) 1 NC_009513.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; RNA-directed DNA polymerase 1484326 5188433 Lreu_1430 Lactobacillus reuteri DSM 20016 RNA-directed DNA polymerase YP_001272013.1 1482944 R 557436 CDS YP_001272014.1 148544644 5188735 complement(1484849..1485343) 1 NC_009513.1 PFAM: isochorismatase hydrolase; isochorismatase hydrolase 1485343 5188735 Lreu_1431 Lactobacillus reuteri DSM 20016 isochorismatase hydrolase YP_001272014.1 1484849 R 557436 CDS YP_001272015.1 148544645 5188550 complement(1485569..1488895) 1 NC_009513.1 PFAM: helicase domain protein; type III restriction protein, res subunit; protein of unknown function DUF450; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; type III restriction protein, res subunit 1488895 5188550 Lreu_1432 Lactobacillus reuteri DSM 20016 type III restriction protein, res subunit YP_001272015.1 1485569 R 557436 CDS YP_001272016.1 148544646 5188404 complement(1488888..1490006) 1 NC_009513.1 PFAM: restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit 1490006 5188404 Lreu_1433 Lactobacillus reuteri DSM 20016 restriction modification system DNA specificity subunit YP_001272016.1 1488888 R 557436 CDS YP_001272017.1 148544647 5188999 complement(1490032..1491000) 1 NC_009513.1 PFAM: phage integrase family protein; phage integrase family protein 1491000 5188999 Lreu_1434 Lactobacillus reuteri DSM 20016 phage integrase family protein YP_001272017.1 1490032 R 557436 CDS YP_001272018.1 148544648 5188687 complement(1491046..1492068) 1 NC_009513.1 PFAM: restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit 1492068 5188687 Lreu_1435 Lactobacillus reuteri DSM 20016 restriction modification system DNA specificity subunit YP_001272018.1 1491046 R 557436 CDS YP_001272019.1 148544649 5189815 complement(1492110..1493663) 1 NC_009513.1 PFAM: N-6 DNA methylase; N-6 DNA methylase 1493663 5189815 Lreu_1436 Lactobacillus reuteri DSM 20016 N-6 DNA methylase YP_001272019.1 1492110 R 557436 CDS YP_001272020.1 148544650 5189351 complement(1494434..1495642) 1 NC_009513.1 hypothetical protein 1495642 5189351 Lreu_1437 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272020.1 1494434 R 557436 CDS YP_001272021.1 148544651 5188659 complement(1496226..1497605) 1 NC_009513.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; protein of unknown function Met10; (Uracil-5)-methyltransferase; RNA methyltransferase 1497605 5188659 Lreu_1438 Lactobacillus reuteri DSM 20016 RNA methyltransferase YP_001272021.1 1496226 R 557436 CDS YP_001272022.1 148544652 5189232 complement(1498090..1499103) 1 NC_009513.1 similar to YegS from E. coli; lipid kinase 1499103 5189232 Lreu_1439 Lactobacillus reuteri DSM 20016 lipid kinase YP_001272022.1 1498090 R 557436 CDS YP_001272023.1 148544653 5188302 complement(1499115..1500539) 1 NC_009513.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 1500539 gatB 5188302 gatB Lactobacillus reuteri DSM 20016 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_001272023.1 1499115 R 557436 CDS YP_001272024.1 148544654 5189091 complement(1500541..1502013) 1 NC_009513.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 1502013 gatA 5189091 gatA Lactobacillus reuteri DSM 20016 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_001272024.1 1500541 R 557436 CDS YP_001272025.1 148544655 5189842 complement(1502013..1502330) 1 NC_009513.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 1502330 gatC 5189842 gatC Lactobacillus reuteri DSM 20016 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_001272025.1 1502013 R 557436 CDS YP_001272026.1 148544656 5188211 complement(1502482..1503597) 1 NC_009513.1 PFAM: CamS sex pheromone cAM373 family protein; CamS sex pheromone cAM373 family protein 1503597 5188211 Lreu_1443 Lactobacillus reuteri DSM 20016 CamS sex pheromone cAM373 family protein YP_001272026.1 1502482 R 557436 CDS YP_001272027.1 148544657 5188720 complement(1503601..1505643) 1 NC_009513.1 TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation; SMART: NAD-dependent DNA ligase-like; NAD-dependent DNA ligase 1505643 5188720 Lreu_1444 Lactobacillus reuteri DSM 20016 NAD-dependent DNA ligase YP_001272027.1 1503601 R 557436 CDS YP_001272028.1 148544658 5188713 complement(1505662..1507935) 1 NC_009513.1 TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; ATP-dependent DNA helicase PcrA 1507935 5188713 Lreu_1445 Lactobacillus reuteri DSM 20016 ATP-dependent DNA helicase PcrA YP_001272028.1 1505662 R 557436 CDS YP_001272029.1 148544659 5188646 complement(1508092..1509225) 1 NC_009513.1 PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; phosphoribosylaminoimidazole carboxylase 1509225 5188646 Lreu_1446 Lactobacillus reuteri DSM 20016 phosphoribosylaminoimidazole carboxylase YP_001272029.1 1508092 R 557436 CDS YP_001272030.1 148544660 5188598 complement(1509242..1509817) 1 NC_009513.1 TIGRFAM: xanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; xanthine phosphoribosyltransferase 1509817 5188598 Lreu_1447 Lactobacillus reuteri DSM 20016 xanthine phosphoribosyltransferase YP_001272030.1 1509242 R 557436 CDS YP_001272031.1 148544661 5188603 complement(1509835..1510461) 1 NC_009513.1 PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase 1510461 5188603 Lreu_1448 Lactobacillus reuteri DSM 20016 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase YP_001272031.1 1509835 R 557436 CDS YP_001272032.1 148544662 5188487 complement(1510611..1511384) 1 NC_009513.1 TIGRFAM: acetoin reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR; acetoin reductase 1511384 5188487 Lreu_1449 Lactobacillus reuteri DSM 20016 acetoin reductase YP_001272032.1 1510611 R 557436 CDS YP_001272033.1 148544663 5188201 complement(1511500..1511895) 1 NC_009513.1 PFAM: ribosomal protein S9; 30S ribosomal protein S9 1511895 5188201 Lreu_1450 Lactobacillus reuteri DSM 20016 30S ribosomal protein S9 YP_001272033.1 1511500 R 557436 CDS YP_001272034.1 148544664 5189333 complement(1511909..1512352) 1 NC_009513.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1512352 rplM 5189333 rplM Lactobacillus reuteri DSM 20016 50S ribosomal protein L13 YP_001272034.1 1511909 R 557436 CDS YP_001272035.1 148544665 5188242 complement(1512458..1513228) 1 NC_009513.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1513228 truA 5188242 truA Lactobacillus reuteri DSM 20016 tRNA pseudouridine synthase A YP_001272035.1 1512458 R 557436 CDS YP_001272036.1 148544666 5188467 complement(1513248..1514051) 1 NC_009513.1 PFAM: cobalt transport protein; cobalt transport protein 1514051 5188467 Lreu_1453 Lactobacillus reuteri DSM 20016 cobalt transport protein YP_001272036.1 1513248 R 557436 CDS YP_001272037.1 148544667 5189220 complement(1514044..1514910) 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 1514910 5189220 Lreu_1454 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001272037.1 1514044 R 557436 CDS YP_001272038.1 148544668 5188225 complement(1514886..1515713) 1 NC_009513.1 PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 1515713 5188225 Lreu_1455 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001272038.1 1514886 R 557436 CDS YP_001272039.1 148544669 5189138 complement(1515933..1516316) 1 NC_009513.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1516316 rplQ 5189138 rplQ Lactobacillus reuteri DSM 20016 50S ribosomal protein L17 YP_001272039.1 1515933 R 557436 CDS YP_001272040.1 148544670 5188443 complement(1516351..1517295) 1 NC_009513.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1517295 5188443 Lreu_1457 Lactobacillus reuteri DSM 20016 DNA-directed RNA polymerase subunit alpha YP_001272040.1 1516351 R 557436 CDS YP_001272041.1 148544671 5188376 complement(1517381..1517770) 1 NC_009513.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1517770 5188376 Lreu_1458 Lactobacillus reuteri DSM 20016 30S ribosomal protein S11 YP_001272041.1 1517381 R 557436 CDS YP_001272042.1 148544672 5189953 complement(1517805..1518170) 1 NC_009513.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1518170 rpsM 5189953 rpsM Lactobacillus reuteri DSM 20016 30S ribosomal protein S13 YP_001272042.1 1517805 R 557436 CDS YP_001272043.1 148544673 5188264 complement(1518202..1518321) 1 NC_009513.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 1518321 rpmJ 5188264 rpmJ Lactobacillus reuteri DSM 20016 50S ribosomal protein L36 YP_001272043.1 1518202 R 557436 CDS YP_001272044.1 148544674 5188218 complement(1518358..1518576) 1 NC_009513.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1518576 infA 5188218 infA Lactobacillus reuteri DSM 20016 translation initiation factor IF-1 YP_001272044.1 1518358 R 557436 CDS YP_001272045.1 148544675 5188212 complement(1518710..1519369) 1 NC_009513.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1519369 adk 5188212 adk Lactobacillus reuteri DSM 20016 adenylate kinase YP_001272045.1 1518710 R 557436 CDS YP_001272046.1 148544676 5188351 complement(1519369..1520685) 1 NC_009513.1 TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; protein translocase subunit SecY 1520685 5188351 Lreu_1463 Lactobacillus reuteri DSM 20016 protein translocase subunit SecY YP_001272046.1 1519369 R 557436 CDS YP_001272047.1 148544677 5188173 complement(1520687..1521121) 1 NC_009513.1 late assembly protein; 50S ribosomal protein L15 1521121 rplO 5188173 rplO Lactobacillus reuteri DSM 20016 50S ribosomal protein L15 YP_001272047.1 1520687 R 557436 CDS YP_001272048.1 148544678 5188561 complement(1521153..1521335) 1 NC_009513.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 1521335 rpmD 5188561 rpmD Lactobacillus reuteri DSM 20016 50S ribosomal protein L30 YP_001272048.1 1521153 R 557436 CDS YP_001272049.1 148544679 5188694 complement(1521351..1521860) 1 NC_009513.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1521860 rpsE 5188694 rpsE Lactobacillus reuteri DSM 20016 30S ribosomal protein S5 YP_001272049.1 1521351 R 557436 CDS YP_001272050.1 148544680 5189209 complement(1521882..1522238) 1 NC_009513.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1522238 rplR 5189209 rplR Lactobacillus reuteri DSM 20016 50S ribosomal protein L18 YP_001272050.1 1521882 R 557436 CDS YP_001272051.1 148544681 5189893 complement(1522301..1522837) 1 NC_009513.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1522837 rplF 5189893 rplF Lactobacillus reuteri DSM 20016 50S ribosomal protein L6 YP_001272051.1 1522301 R 557436 CDS YP_001272052.1 148544682 5188568 complement(1522867..1523265) 1 NC_009513.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1523265 rpsH 5188568 rpsH Lactobacillus reuteri DSM 20016 30S ribosomal protein S8 YP_001272052.1 1522867 R 557436 CDS YP_001272053.1 148544683 5189320 complement(1523298..1523483) 1 NC_009513.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 1523483 rpsN 5189320 rpsN Lactobacillus reuteri DSM 20016 30S ribosomal protein S14 YP_001272053.1 1523298 R 557436 CDS YP_001272054.1 148544684 5189302 complement(1523499..1524041) 1 NC_009513.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1524041 rplE 5189302 rplE Lactobacillus reuteri DSM 20016 50S ribosomal protein L5 YP_001272054.1 1523499 R 557436 CDS YP_001272055.1 148544685 5189139 complement(1524070..1524378) 1 NC_009513.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1524378 rplX 5189139 rplX Lactobacillus reuteri DSM 20016 50S ribosomal protein L24 YP_001272055.1 1524070 R 557436 CDS YP_001272056.1 148544686 5189256 complement(1524414..1524782) 1 NC_009513.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 1524782 rplN 5189256 rplN Lactobacillus reuteri DSM 20016 50S ribosomal protein L14 YP_001272056.1 1524414 R 557436 CDS YP_001272057.1 148544687 5188352 complement(1524852..1525118) 1 NC_009513.1 PFAM: ribosomal protein S17; 30S ribosomal protein S17 1525118 5188352 Lreu_1474 Lactobacillus reuteri DSM 20016 30S ribosomal protein S17 YP_001272057.1 1524852 R 557436 CDS YP_001272058.1 148544688 5188358 complement(1525143..1525349) 1 NC_009513.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 1525349 5188358 Lreu_1475 Lactobacillus reuteri DSM 20016 50S ribosomal protein L29 YP_001272058.1 1525143 R 557436 CDS YP_001272059.1 148544689 5188224 complement(1525339..1525773) 1 NC_009513.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1525773 rplP 5188224 rplP Lactobacillus reuteri DSM 20016 50S ribosomal protein L16 YP_001272059.1 1525339 R 557436 CDS YP_001272060.1 148544690 5188217 complement(1525777..1526442) 1 NC_009513.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 1526442 rpsC 5188217 rpsC Lactobacillus reuteri DSM 20016 30S ribosomal protein S3 YP_001272060.1 1525777 R 557436 CDS YP_001272061.1 148544691 5188228 complement(1526455..1526802) 1 NC_009513.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1526802 rplV 5188228 rplV Lactobacillus reuteri DSM 20016 50S ribosomal protein L22 YP_001272061.1 1526455 R 557436 CDS YP_001272062.1 148544692 5188493 complement(1526820..1527098) 1 NC_009513.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1527098 rpsS 5188493 rpsS Lactobacillus reuteri DSM 20016 30S ribosomal protein S19 YP_001272062.1 1526820 R 557436 CDS YP_001272063.1 148544693 5188198 complement(1527139..1527984) 1 NC_009513.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1527984 rplB 5188198 rplB Lactobacillus reuteri DSM 20016 50S ribosomal protein L2 YP_001272063.1 1527139 R 557436 CDS YP_001272064.1 148544694 5188542 complement(1528010..1528306) 1 NC_009513.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1528306 rplW 5188542 rplW Lactobacillus reuteri DSM 20016 50S ribosomal protein L23 YP_001272064.1 1528010 R 557436 CDS YP_001272065.1 148544695 5188248 complement(1528306..1528929) 1 NC_009513.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1528929 rplD 5188248 rplD Lactobacillus reuteri DSM 20016 50S ribosomal protein L4 YP_001272065.1 1528306 R 557436 CDS YP_001272066.1 148544696 5188492 complement(1528951..1529610) 1 NC_009513.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1529610 rplC 5188492 rplC Lactobacillus reuteri DSM 20016 50S ribosomal protein L3 YP_001272066.1 1528951 R 557436 CDS YP_001272067.1 148544697 5188570 complement(1529659..1529967) 1 NC_009513.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1529967 rpsJ 5188570 rpsJ Lactobacillus reuteri DSM 20016 30S ribosomal protein S10 YP_001272067.1 1529659 R 557436 CDS YP_001272068.1 148544698 5188502 complement(1530684..1531715) 1 NC_009513.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 1531715 5188502 Lreu_1485 Lactobacillus reuteri DSM 20016 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001272068.1 1530684 R 557436 CDS YP_001272069.1 148544699 5189876 complement(1531918..1534005) 1 NC_009513.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1534005 fusA 5189876 fusA Lactobacillus reuteri DSM 20016 elongation factor G YP_001272069.1 1531918 R 557436 CDS YP_001272070.1 148544700 5188176 complement(1534144..1534614) 1 NC_009513.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 1534614 5188176 Lreu_1487 Lactobacillus reuteri DSM 20016 30S ribosomal protein S7 YP_001272070.1 1534144 R 557436 CDS YP_001272071.1 148544701 5188446 complement(1534635..1535054) 1 NC_009513.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 1535054 rpsL 5188446 rpsL Lactobacillus reuteri DSM 20016 30S ribosomal protein S12 YP_001272071.1 1534635 R 557436 CDS YP_001272072.1 148544702 5188551 1535322..1535996 1 NC_009513.1 PFAM: peptidase A24A, prepilin type IV; peptidase A24A domain protein; peptidase A24A domain-containing protein 1535996 5188551 Lreu_1489 Lactobacillus reuteri DSM 20016 peptidase A24A domain-containing protein YP_001272072.1 1535322 D 557436 CDS YP_001272073.1 148544703 5188486 complement(1536035..1537210) 1 NC_009513.1 hypothetical protein 1537210 5188486 Lreu_1490 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272073.1 1536035 R 557436 CDS YP_001272074.1 148544704 5188626 complement(1537280..1540915) 1 NC_009513.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 1540915 5188626 Lreu_1491 Lactobacillus reuteri DSM 20016 DNA-directed RNA polymerase subunit beta' YP_001272074.1 1537280 R 557436 CDS YP_001272075.1 148544705 5188381 complement(1540959..1544567) 1 NC_009513.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 1544567 rpoB 5188381 rpoB Lactobacillus reuteri DSM 20016 DNA-directed RNA polymerase subunit beta YP_001272075.1 1540959 R 557436 CDS YP_001272076.1 148544706 5188633 complement(1544804..1545406) 1 NC_009513.1 PFAM: regulatory protein, TetR; TetR family transcriptional regulator 1545406 5188633 Lreu_1493 Lactobacillus reuteri DSM 20016 TetR family transcriptional regulator YP_001272076.1 1544804 R 557436 CDS YP_001272077.1 148544707 5188227 complement(1545692..1548184) 1 NC_009513.1 PFAM: UvrB/UvrC protein; AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATPase 1548184 5188227 Lreu_1494 Lactobacillus reuteri DSM 20016 ATPase YP_001272077.1 1545692 R 557436 CDS YP_001272078.1 148544708 5188312 complement(1548199..1548666) 1 NC_009513.1 PFAM: Firmicute transcriptional repressor of class III stress genes; transcriptional repressor CtsR 1548666 5188312 Lreu_1495 Lactobacillus reuteri DSM 20016 transcriptional repressor CtsR YP_001272078.1 1548199 R 557436 CDS YP_001272079.1 148544709 5188526 complement(1548840..1549868) 1 NC_009513.1 similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs; alcohol dehydrogenase 1549868 5188526 Lreu_1496 Lactobacillus reuteri DSM 20016 alcohol dehydrogenase YP_001272079.1 1548840 R 557436 CDS YP_001272080.1 148544710 5188615 complement(1551822..1552463) 1 NC_009513.1 PFAM: deoxynucleoside kinase; deoxyadenosine kinase 1552463 5188615 Lreu_1498 Lactobacillus reuteri DSM 20016 deoxyadenosine kinase YP_001272080.1 1551822 R 557436 CDS YP_001272081.1 148544711 5188871 1552723..1553181 1 NC_009513.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 1553181 5188871 Lreu_1499 Lactobacillus reuteri DSM 20016 transposase IS200-family protein YP_001272081.1 1552723 D 557436 CDS YP_001272082.1 148544712 5188579 complement(1553332..1554807) 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 1554807 5188579 Lreu_1500 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001272082.1 1553332 R 557436 CDS YP_001272083.1 148544713 5188619 complement(1555147..1555602) 1 NC_009513.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1555602 5188619 Lreu_1501 Lactobacillus reuteri DSM 20016 N-acetyltransferase GCN5 YP_001272083.1 1555147 R 557436 CDS YP_001272084.1 148544714 5188420 complement(1555673..1556347) 1 NC_009513.1 PFAM: phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 1556347 5188420 Lreu_1502 Lactobacillus reuteri DSM 20016 PA-phosphatase-like phosphoesterase YP_001272084.1 1555673 R 557436 CDS YP_001272085.1 148544715 5189137 complement(1556403..1556876) 1 NC_009513.1 hypothetical protein 1556876 5189137 Lreu_1503 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272085.1 1556403 R 557436 CDS YP_001272086.1 148544716 5189034 complement(1556888..1557643) 1 NC_009513.1 PFAM: protein of unknown function DUF1212; hypothetical protein 1557643 5189034 Lreu_1504 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272086.1 1556888 R 557436 CDS YP_001272087.1 148544717 5189315 complement(1557752..1557952) 1 NC_009513.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding protein family protein 1557952 5189315 Lreu_1505 Lactobacillus reuteri DSM 20016 cold-shock DNA-binding protein family protein YP_001272087.1 1557752 R 557436 CDS YP_001272088.1 148544718 5189211 complement(1558099..1558773) 1 NC_009513.1 PFAM: iron dependent repressor; FeoA family protein; iron dependent repressor 1558773 5189211 Lreu_1506 Lactobacillus reuteri DSM 20016 iron dependent repressor YP_001272088.1 1558099 R 557436 CDS YP_001272089.1 148544719 5189255 1558956..1559876 1 NC_009513.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter 1559876 5189255 Lreu_1507 Lactobacillus reuteri DSM 20016 cation diffusion facilitator family transporter YP_001272089.1 1558956 D 557436 CDS YP_001272090.1 148544720 5189173 complement(1559942..1560634) 1 NC_009513.1 PFAM: protein of unknown function DUF125, transmembrane; hypothetical protein 1560634 5189173 Lreu_1508 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272090.1 1559942 R 557436 CDS YP_001272091.1 148544721 5189156 complement(1560649..1561332) 1 NC_009513.1 PFAM: protein of unknown function DUF125, transmembrane; hypothetical protein 1561332 5189156 Lreu_1509 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272091.1 1560649 R 557436 CDS YP_001272092.1 148544722 5189082 complement(1561504..1561980) 1 NC_009513.1 PFAM: UspA domain protein; UspA domain-containing protein 1561980 5189082 Lreu_1510 Lactobacillus reuteri DSM 20016 UspA domain-containing protein YP_001272092.1 1561504 R 557436 CDS YP_001272093.1 148544723 5188514 1562258..1562998 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 1562998 5188514 Lreu_1511 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001272093.1 1562258 D 557436 CDS YP_001272094.1 148544724 5189096 1563011..1563841 1 NC_009513.1 PFAM: extracellular solute-binding protein, family 3; SMART: ionotropic glutamate receptor; extracellular solute-binding protein 1563841 5189096 Lreu_1512 Lactobacillus reuteri DSM 20016 extracellular solute-binding protein YP_001272094.1 1563011 D 557436 CDS YP_001272095.1 148544725 5188717 1563841..1564479 1 NC_009513.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane protein 1564479 5188717 Lreu_1513 Lactobacillus reuteri DSM 20016 polar amino acid ABC transporter inner membrane protein YP_001272095.1 1563841 D 557436 CDS YP_001272096.1 148544726 5189147 1564492..1565145 1 NC_009513.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane protein 1565145 5189147 Lreu_1514 Lactobacillus reuteri DSM 20016 polar amino acid ABC transporter inner membrane protein YP_001272096.1 1564492 D 557436 CDS YP_001272097.1 148544727 5188506 complement(1565258..1566445) 1 NC_009513.1 PFAM: Abortive infection protein; abortive infection protein 1566445 5188506 Lreu_1515 Lactobacillus reuteri DSM 20016 abortive infection protein YP_001272097.1 1565258 R 557436 CDS YP_001272098.1 148544728 5188682 complement(1566593..1568449) 1 NC_009513.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; beta-lactamase domain-containing protein 1568449 5188682 Lreu_1516 Lactobacillus reuteri DSM 20016 beta-lactamase domain-containing protein YP_001272098.1 1566593 R 557436 CDS YP_001272099.1 148544729 5188295 complement(1568724..1569071) 1 NC_009513.1 hypothetical protein 1569071 5188295 Lreu_1517 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272099.1 1568724 R 557436 CDS YP_001272100.1 148544730 5188691 complement(1569150..1569596) 1 NC_009513.1 PFAM: regulatory protein, MerR; MerR family transcriptional regulator 1569596 5188691 Lreu_1518 Lactobacillus reuteri DSM 20016 MerR family transcriptional regulator YP_001272100.1 1569150 R 557436 CDS YP_001272101.1 148544731 5189309 1569729..1571237 1 NC_009513.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA family drug resistance transporter 1571237 5189309 Lreu_1519 Lactobacillus reuteri DSM 20016 EmrB/QacA family drug resistance transporter YP_001272101.1 1569729 D 557436 CDS YP_001272102.1 148544732 5189237 1571237..1571965 1 NC_009513.1 hypothetical protein 1571965 5189237 Lreu_1520 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272102.1 1571237 D 557436 CDS YP_001272103.1 148544733 5189222 complement(1572176..1573048) 1 NC_009513.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RluA family pseudouridine synthase 1573048 5189222 Lreu_1521 Lactobacillus reuteri DSM 20016 RluA family pseudouridine synthase YP_001272103.1 1572176 R 557436 CDS YP_001272104.1 148544734 5189136 1573355..1575940 1 NC_009513.1 PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; hypothetical protein 1575940 5189136 Lreu_1522 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272104.1 1573355 D 557436 CDS YP_001272105.1 148544735 5189263 complement(1575999..1576571) 1 NC_009513.1 TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; DJ-1 family protein 1576571 5189263 Lreu_1523 Lactobacillus reuteri DSM 20016 DJ-1 family protein YP_001272105.1 1575999 R 557436 CDS YP_001272106.1 148544736 5189328 complement(1576584..1577567) 1 NC_009513.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase domain-containing protein 1577567 5189328 Lreu_1524 Lactobacillus reuteri DSM 20016 alpha/beta hydrolase domain-containing protein YP_001272106.1 1576584 R 557436 CDS YP_001272107.1 148544737 5189277 complement(1577616..1579175) 1 NC_009513.1 PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter 1579175 5189277 Lreu_1525 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001272107.1 1577616 R 557436 CDS YP_001272108.1 148544738 5189217 complement(1579252..1579905) 1 NC_009513.1 PFAM: Uracil-DNA glycosylase superfamily; uracil-DNA glycosylase superfamily protein 1579905 5189217 Lreu_1526 Lactobacillus reuteri DSM 20016 uracil-DNA glycosylase superfamily protein YP_001272108.1 1579252 R 557436 CDS YP_001272109.1 148544739 5189127 complement(1579918..1581285) 1 NC_009513.1 PFAM: protein of unknown function DUF1212; hypothetical protein 1581285 5189127 Lreu_1527 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272109.1 1579918 R 557436 CDS YP_001272110.1 148544740 5189035 complement(1581341..1582228) 1 NC_009513.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator 1582228 5189035 Lreu_1528 Lactobacillus reuteri DSM 20016 LysR family transcriptional regulator YP_001272110.1 1581341 R 557436 CDS YP_001272111.1 148544741 5190032 complement(1582394..1583815) 1 NC_009513.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; TRAP C4-dicarboxylate transport system permease DctM subunit; anion transporter 1583815 5190032 Lreu_1529 Lactobacillus reuteri DSM 20016 anion transporter YP_001272111.1 1582394 R 557436 CDS YP_001272112.1 148544742 5189055 complement(1583888..1585282) 1 NC_009513.1 TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; flavocytochrome c 1585282 5189055 Lreu_1530 Lactobacillus reuteri DSM 20016 flavocytochrome c YP_001272112.1 1583888 R 557436 CDS YP_001272113.1 148544743 5188576 complement(1585401..1586789) 1 NC_009513.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1586789 fumC 5188576 fumC Lactobacillus reuteri DSM 20016 fumarate hydratase YP_001272113.1 1585401 R 557436 CDS YP_001272114.1 148544744 5188612 complement(1587084..1588712) 1 NC_009513.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 1588712 5188612 Lreu_1532 Lactobacillus reuteri DSM 20016 malate dehydrogenase YP_001272114.1 1587084 R 557436 CDS YP_001272115.1 148544745 5188220 1588849..1589730 1 NC_009513.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; LysR family transcriptional regulator 1589730 5188220 Lreu_1533 Lactobacillus reuteri DSM 20016 LysR family transcriptional regulator YP_001272115.1 1588849 D 557436 CDS YP_001272116.1 148544746 5188314 complement(1589930..1590523) 1 NC_009513.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; peptidyl-prolyl isomerase 1590523 5188314 Lreu_1534 Lactobacillus reuteri DSM 20016 peptidyl-prolyl isomerase YP_001272116.1 1589930 R 557436 CDS YP_001272117.1 148544747 5188628 complement(1590597..1591643) 1 NC_009513.1 TIGRFAM: Alcohol dehydrogenase, zinc-binding type 2; PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; zinc-binding alcohol dehydrogenase 1591643 5188628 Lreu_1535 Lactobacillus reuteri DSM 20016 zinc-binding alcohol dehydrogenase YP_001272117.1 1590597 R 557436 CDS YP_001272118.1 148544748 5188284 complement(1591694..1593232) 1 NC_009513.1 PFAM: plasmid pRiA4b ORF-3 family protein; plasmid pRiA4b ORF-3 family protein 1593232 5188284 Lreu_1536 Lactobacillus reuteri DSM 20016 plasmid pRiA4b ORF-3 family protein YP_001272118.1 1591694 R 557436 CDS YP_001272119.1 148544749 5188154 1593376..1594773 1 NC_009513.1 hypothetical protein 1594773 5188154 Lreu_1537 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272119.1 1593376 D 557436 CDS YP_001272120.1 148544750 5189919 1595155..1596192 1 NC_009513.1 PFAM: Aldose 1-epimerase; aldose 1-epimerase 1596192 5189919 Lreu_1538 Lactobacillus reuteri DSM 20016 aldose 1-epimerase YP_001272120.1 1595155 D 557436 CDS YP_001272121.1 148544751 5189118 complement(1596271..1596711) 1 NC_009513.1 hypothetical protein 1596711 5189118 Lreu_1539 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272121.1 1596271 R 557436 CDS YP_001272122.1 148544752 5189198 complement(1596889..1598133) 1 NC_009513.1 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; serine-type D-Ala-D-Ala carboxypeptidase 1598133 5189198 Lreu_1540 Lactobacillus reuteri DSM 20016 serine-type D-Ala-D-Ala carboxypeptidase YP_001272122.1 1596889 R 557436 CDS YP_001272123.1 148544753 5189858 1598327..1599124 1 NC_009513.1 PFAM: penicillin-binding protein, transpeptidase; penicillin-binding protein, transpeptidase 1599124 5189858 Lreu_1541 Lactobacillus reuteri DSM 20016 penicillin-binding protein, transpeptidase YP_001272123.1 1598327 D 557436 CDS YP_001272124.1 148544754 5189265 complement(1599277..1600734) 1 NC_009513.1 PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; sucrose phosphorylase 1600734 5189265 Lreu_1542 Lactobacillus reuteri DSM 20016 sucrose phosphorylase YP_001272124.1 1599277 R 557436 CDS YP_001272125.1 148544755 5188447 complement(1600761..1601978) 1 NC_009513.1 PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter 1601978 5188447 Lreu_1543 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001272125.1 1600761 R 557436 CDS YP_001272126.1 148544756 5188425 complement(1602275..1603609) 1 NC_009513.1 TIGRFAM: dipeptidase, putative; PFAM: peptidase M20; hypothetical protein 1603609 5188425 Lreu_1544 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272126.1 1602275 R 557436 CDS YP_001272127.1 148544757 5188692 complement(1603622..1605139) 1 NC_009513.1 PFAM: C4-dicarboxylate anaerobic carrier; C4-dicarboxylate anaerobic carrier 1605139 5188692 Lreu_1545 Lactobacillus reuteri DSM 20016 C4-dicarboxylate anaerobic carrier YP_001272127.1 1603622 R 557436 CDS YP_001272128.1 148544758 5188235 1605274..1606218 1 NC_009513.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; Dyp-type peroxidase family protein 1606218 5188235 Lreu_1546 Lactobacillus reuteri DSM 20016 Dyp-type peroxidase family protein YP_001272128.1 1605274 D 557436 CDS YP_001272129.1 148544759 5188700 1606482..1607033 1 NC_009513.1 PFAM: ABC transporter related; ABC transporter-like protien 1607033 5188700 Lreu_1547 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001272129.1 1606482 D 557436 CDS YP_001272130.1 148544760 5189210 1607033..1607950 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 1607950 5189210 Lreu_1548 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001272130.1 1607033 D 557436 CDS YP_001272131.1 148544761 5188399 complement(1608177..1608893) 1 NC_009513.1 esterase/lipase-like protein 1608893 5188399 Lreu_1549 Lactobacillus reuteri DSM 20016 esterase/lipase-like protein YP_001272131.1 1608177 R 557436 CDS YP_001272132.1 148544762 5189051 complement(1610184..1610720) 1 NC_009513.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone) 1610720 5189051 Lreu_1552 Lactobacillus reuteri DSM 20016 NAD(P)H dehydrogenase (quinone) YP_001272132.1 1610184 R 557436 CDS YP_001272133.1 148544763 5188348 complement(1610918..1611832) 1 NC_009513.1 PFAM: Pyridoxal-5'-phosphate-dependent protein, beta subunit; cystathionine beta-synthase 1611832 5188348 Lreu_1553 Lactobacillus reuteri DSM 20016 cystathionine beta-synthase YP_001272133.1 1610918 R 557436 CDS YP_001272134.1 148544764 5188273 1612282..1613214 1 NC_009513.1 PFAM: ferrochelatase; ferrochelatase 1613214 5188273 Lreu_1554 Lactobacillus reuteri DSM 20016 ferrochelatase YP_001272134.1 1612282 D 557436 CDS YP_001272135.1 148544765 5188188 1613217..1614521 1 NC_009513.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; Mn2+/Fe2+ transporter 1614521 5188188 Lreu_1555 Lactobacillus reuteri DSM 20016 Mn2+/Fe2+ transporter YP_001272135.1 1613217 D 557436 CDS YP_001272136.1 148544766 5188462 complement(1614788..1615333) 1 NC_009513.1 PFAM: Methyltransferase type 11; type 11 methyltransferase 1615333 5188462 Lreu_1556 Lactobacillus reuteri DSM 20016 type 11 methyltransferase YP_001272136.1 1614788 R 557436 CDS YP_001272137.1 148544767 5189303 complement(1615351..1616019) 1 NC_009513.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; TrkA domain-containing protein 1616019 5189303 Lreu_1557 Lactobacillus reuteri DSM 20016 TrkA domain-containing protein YP_001272137.1 1615351 R 557436 CDS YP_001272138.1 148544768 5189885 complement(1616012..1617355) 1 NC_009513.1 PFAM: cation transporter; H(+)-transporting two-sector ATPase 1617355 5189885 Lreu_1558 Lactobacillus reuteri DSM 20016 H(+)-transporting two-sector ATPase YP_001272138.1 1616012 R 557436 CDS YP_001272139.1 148544769 5189356 1617510..1619282 1 NC_009513.1 in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen 1619282 5189356 Lreu_1559 Lactobacillus reuteri DSM 20016 myosin-cross-reactive antigen YP_001272139.1 1617510 D 557436 CDS YP_001272140.1 148544770 5189093 1619360..1620121 1 NC_009513.1 PFAM: nitroreductase; nitroreductase 1620121 5189093 Lreu_1560 Lactobacillus reuteri DSM 20016 nitroreductase YP_001272140.1 1619360 D 557436 CDS YP_001272141.1 148544771 5188317 complement(1620118..1621257) 1 NC_009513.1 PFAM: glycoside hydrolase, family 8; glycoside hydrolase 1621257 5188317 Lreu_1561 Lactobacillus reuteri DSM 20016 glycoside hydrolase YP_001272141.1 1620118 R 557436 CDS YP_001272142.1 148544772 5188294 complement(1621272..1622579) 1 NC_009513.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 1622579 5188294 Lreu_1562 Lactobacillus reuteri DSM 20016 glycosyl transferase family protein YP_001272142.1 1621272 R 557436 CDS YP_001272143.1 148544773 5190057 complement(1622722..1623585) 1 NC_009513.1 hypothetical protein 1623585 5190057 Lreu_1563 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272143.1 1622722 R 557436 CDS YP_001272144.1 148544774 5188516 complement(1624758..1625462) 1 NC_009513.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; phosphate uptake regulator PhoU 1625462 5188516 Lreu_1564 Lactobacillus reuteri DSM 20016 phosphate uptake regulator PhoU YP_001272144.1 1624758 R 557436 CDS YP_001272145.1 148544775 5190112 complement(1625473..1626228) 1 NC_009513.1 TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase 1626228 5190112 Lreu_1565 Lactobacillus reuteri DSM 20016 phosphate ABC transporter ATPase YP_001272145.1 1625473 R 557436 CDS YP_001272146.1 148544776 5188411 complement(1626239..1627120) 1 NC_009513.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 1627120 5188411 Lreu_1566 Lactobacillus reuteri DSM 20016 phosphate ABC transporter permease YP_001272146.1 1626239 R 557436 CDS YP_001272147.1 148544777 5188293 complement(1627120..1628019) 1 NC_009513.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 1628019 5188293 Lreu_1567 Lactobacillus reuteri DSM 20016 phosphate ABC transporter permease YP_001272147.1 1627120 R 557436 CDS YP_001272148.1 148544778 5189295 complement(1628024..1628896) 1 NC_009513.1 TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein, family 1; phosphate binding protein 1628896 5189295 Lreu_1568 Lactobacillus reuteri DSM 20016 phosphate binding protein YP_001272148.1 1628024 R 557436 CDS YP_001272149.1 148544779 5188401 1629022..1629732 1 NC_009513.1 PFAM: transcriptional regulator domain protein; winged helix family two component response transcriptional regulator 1629732 5188401 Lreu_1569 Lactobacillus reuteri DSM 20016 winged helix family two component response transcriptional regulator YP_001272149.1 1629022 D 557436 CDS YP_001272150.1 148544780 5188591 1630646..1630957 1 NC_009513.1 hypothetical protein 1630957 5188591 Lreu_1571 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272150.1 1630646 D 557436 CDS YP_001272151.1 148544781 5189192 complement(1630981..1631193) 1 NC_009513.1 hypothetical protein 1631193 5189192 Lreu_1572 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272151.1 1630981 R 557436 CDS YP_001272152.1 148544782 5189599 complement(1631357..1632370) 1 NC_009513.1 hypothetical protein 1632370 5189599 Lreu_1573 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272152.1 1631357 R 557436 CDS YP_001272153.1 148544783 5188301 1632486..1633016 1 NC_009513.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1633016 5188301 Lreu_1574 Lactobacillus reuteri DSM 20016 N-acetyltransferase GCN5 YP_001272153.1 1632486 D 557436 CDS YP_001272154.1 148544784 5189347 1633201..1633788 1 NC_009513.1 PFAM: mannose-6-phosphate isomerase, type I; mannose-6-phosphate isomerase 1633788 5189347 Lreu_1575 Lactobacillus reuteri DSM 20016 mannose-6-phosphate isomerase YP_001272154.1 1633201 D 557436 CDS YP_001272155.1 148544785 5188178 1633944..1634123 1 NC_009513.1 hypothetical protein 1634123 5188178 Lreu_1576 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272155.1 1633944 D 557436 CDS YP_001272156.1 148544786 5188271 complement(1634120..1635013) 1 NC_009513.1 PFAM: regulatory protein, LysR; LysR family transcriptional regulator 1635013 5188271 Lreu_1577 Lactobacillus reuteri DSM 20016 LysR family transcriptional regulator YP_001272156.1 1634120 R 557436 CDS YP_001272157.1 148544787 5188655 1635142..1636248 1 NC_009513.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 1636248 5188655 Lreu_1578 Lactobacillus reuteri DSM 20016 alcohol dehydrogenase YP_001272157.1 1635142 D 557436 CDS YP_001272158.1 148544788 5188209 1636334..1636654 1 NC_009513.1 SMART: low molecular weight phosphotyrosine protein phosphatase; protein tyrosine phosphatase 1636654 5188209 Lreu_1579 Lactobacillus reuteri DSM 20016 protein tyrosine phosphatase YP_001272158.1 1636334 D 557436 CDS YP_001272159.1 148544789 5189287 complement(1636778..1637821) 1 NC_009513.1 hypothetical protein 1637821 5189287 Lreu_1580 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272159.1 1636778 R 557436 CDS YP_001272160.1 148544790 5188460 complement(1638013..1638570) 1 NC_009513.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1638570 5188460 Lreu_1581 Lactobacillus reuteri DSM 20016 elongation factor P YP_001272160.1 1638013 R 557436 CDS YP_001272161.1 148544791 5189835 complement(1638830..1639939) 1 NC_009513.1 membrane protein toxin regulator-like protein 1639939 5189835 Lreu_1582 Lactobacillus reuteri DSM 20016 membrane protein toxin regulator-like protein YP_001272161.1 1638830 R 557436 CDS YP_001272162.1 148544792 5188916 1640654..1641289 1 NC_009513.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 1641289 5188916 Lreu_1584 Lactobacillus reuteri DSM 20016 integrase catalytic subunit YP_001272162.1 1640654 D 557436 CDS YP_001272163.1 148544793 5189039 complement(1641813..1642676) 1 NC_009513.1 PFAM: NLPA lipoprotein; NLPA lipoprotein 1642676 5189039 Lreu_1585 Lactobacillus reuteri DSM 20016 NLPA lipoprotein YP_001272163.1 1641813 R 557436 CDS YP_001272164.1 148544794 5188910 complement(1642792..1643268) 1 NC_009513.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 1643268 5188910 Lreu_1586 Lactobacillus reuteri DSM 20016 S-ribosylhomocysteinase YP_001272164.1 1642792 R 557436 CDS YP_001272165.1 148544795 5188426 complement(1643656..1644342) 1 NC_009513.1 PFAM: peptidase M10A and M12B, matrixin and adamalysin; peptidase M10A and M12B, matrixin and adamalysin 1644342 5188426 Lreu_1587 Lactobacillus reuteri DSM 20016 peptidase M10A and M12B, matrixin and adamalysin YP_001272165.1 1643656 R 557436 CDS YP_001272166.1 148544796 5190116 complement(1644366..1644980) 1 NC_009513.1 hypothetical protein 1644980 5190116 Lreu_1588 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272166.1 1644366 R 557436 CDS YP_001272167.1 148544797 5189007 complement(1645286..1646341) 1 NC_009513.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 1646341 5189007 Lreu_1589 Lactobacillus reuteri DSM 20016 alcohol dehydrogenase YP_001272167.1 1645286 R 557436 CDS YP_001272168.1 148544798 5188158 1646660..1647550 1 NC_009513.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 1647550 5188158 Lreu_1590 Lactobacillus reuteri DSM 20016 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001272168.1 1646660 D 557436 CDS YP_001272169.1 148544799 5188963 1648108..1649502 1 NC_009513.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 1649502 5188963 Lreu_1592 Lactobacillus reuteri DSM 20016 integrase catalytic subunit YP_001272169.1 1648108 D 557436 CDS YP_001272170.1 148544800 5189068 1649717..1650964 1 NC_009513.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase, IS204/IS1001/IS1096/IS1165 family protein 1650964 5189068 Lreu_1593 Lactobacillus reuteri DSM 20016 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001272170.1 1649717 D 557436 CDS YP_001272171.1 148544801 5189329 complement(1651032..1651274) 1 NC_009513.1 PFAM: cytochrome b5; cytochrome b5 1651274 5189329 Lreu_1594 Lactobacillus reuteri DSM 20016 cytochrome b5 YP_001272171.1 1651032 R 557436 CDS YP_001272172.1 148544802 5188583 complement(1651366..1651836) 1 NC_009513.1 transposase 1651836 5188583 Lreu_1595 Lactobacillus reuteri DSM 20016 transposase YP_001272172.1 1651366 R 557436 CDS YP_001272173.1 148544803 5189272 1652017..1652304 1 NC_009513.1 hypothetical protein 1652304 5189272 Lreu_1596 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272173.1 1652017 D 557436 CDS YP_001272174.1 148544804 5188288 complement(1652484..1653071) 1 NC_009513.1 hypothetical protein 1653071 5188288 Lreu_1597 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272174.1 1652484 R 557436 CDS YP_001272175.1 148544805 5190160 complement(1653138..1653254) 1 NC_009513.1 hypothetical protein 1653254 5190160 Lreu_1598 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272175.1 1653138 R 557436 CDS YP_001272176.1 148544806 5188573 1653567..1654736 1 NC_009513.1 TIGRFAM: hydroxymethylpyrimidine transporter CytX; PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; hydroxymethylpyrimidine transporter CytX 1654736 5188573 Lreu_1599 Lactobacillus reuteri DSM 20016 hydroxymethylpyrimidine transporter CytX YP_001272176.1 1653567 D 557436 CDS YP_001272177.1 148544807 5188761 complement(1654810..1655331) 1 NC_009513.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1655331 5188761 Lreu_1600 Lactobacillus reuteri DSM 20016 N-acetyltransferase GCN5 YP_001272177.1 1654810 R 557436 CDS YP_001272178.1 148544808 5188600 complement(1655547..1656011) 1 NC_009513.1 hypothetical protein 1656011 5188600 Lreu_1601 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272178.1 1655547 R 557436 CDS YP_001272179.1 148544809 5188262 complement(1656024..1657091) 1 NC_009513.1 PFAM: Peptidoglycan-binding LysM; peptidoglycan-binding LysM 1657091 5188262 Lreu_1602 Lactobacillus reuteri DSM 20016 peptidoglycan-binding LysM YP_001272179.1 1656024 R 557436 CDS YP_001272180.1 148544810 5189112 complement(1657184..1658344) 1 NC_009513.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; major facilitator superfamily transporter 1658344 5189112 Lreu_1603 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001272180.1 1657184 R 557436 CDS YP_001272181.1 148544811 5190145 1658408..1658899 1 NC_009513.1 PFAM: conserved hypothetical protein 1440; hypothetical protein 1658899 5190145 Lreu_1604 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272181.1 1658408 D 557436 CDS YP_001272182.1 148544812 5188489 complement(1659091..1659963) 1 NC_009513.1 PFAM: tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 1659963 5188489 Lreu_1605 Lactobacillus reuteri DSM 20016 tRNA/rRNA methyltransferase SpoU YP_001272182.1 1659091 R 557436 CDS YP_001272183.1 148544813 5189117 complement(1660034..1661272) 1 NC_009513.1 PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter 1661272 5189117 Lreu_1606 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001272183.1 1660034 R 557436 CDS YP_001272184.1 148544814 5189321 complement(1661665..1662873) 1 NC_009513.1 PFAM: phage integrase family protein; phage integrase family protein 1662873 5189321 Lreu_1607 Lactobacillus reuteri DSM 20016 phage integrase family protein YP_001272184.1 1661665 R 557436 CDS YP_001272185.1 148544815 5188604 complement(1662860..1663075) 1 NC_009513.1 hypothetical protein 1663075 5188604 Lreu_1608 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272185.1 1662860 R 557436 CDS YP_001272186.1 148544816 5189285 complement(1663077..1663325) 1 NC_009513.1 hypothetical protein 1663325 5189285 Lreu_1609 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272186.1 1663077 R 557436 CDS YP_001272187.1 148544817 5189316 complement(1663343..1665409) 1 NC_009513.1 hypothetical protein 1665409 5189316 Lreu_1610 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272187.1 1663343 R 557436 CDS YP_001272188.1 148544818 5188490 complement(1665376..1666281) 1 NC_009513.1 hypothetical protein 1666281 5188490 Lreu_1611 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272188.1 1665376 R 557436 CDS YP_001272189.1 148544819 5188482 complement(1666766..1667248) 1 NC_009513.1 IS30 family transposase 1667248 5188482 Lreu_1612 Lactobacillus reuteri DSM 20016 IS30 family transposase YP_001272189.1 1666766 R 557436 CDS YP_001272190.1 148544820 5188488 complement(1667440..1669209) 1 NC_009513.1 PFAM: glycoside hydrolase, family 13 domain protein Ig domain protein region domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; alpha amylase 1669209 5188488 Lreu_1613 Lactobacillus reuteri DSM 20016 alpha amylase YP_001272190.1 1667440 R 557436 CDS YP_001272191.1 148544821 5189342 complement(1669206..1670552) 1 NC_009513.1 PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter 1670552 5189342 Lreu_1614 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001272191.1 1669206 R 557436 CDS YP_001272192.1 148544822 5188397 complement(1670820..1671113) 1 NC_009513.1 hypothetical protein 1671113 5188397 Lreu_1615 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272192.1 1670820 R 557436 CDS YP_001272193.1 148544823 5188291 1671208..1671678 1 NC_009513.1 hypothetical protein 1671678 5188291 Lreu_1616 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272193.1 1671208 D 557436 CDS YP_001272194.1 148544824 5189063 complement(1672813..1674366) 1 NC_009513.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1674366 guaA 5189063 guaA Lactobacillus reuteri DSM 20016 GMP synthase YP_001272194.1 1672813 R 557436 CDS YP_001272195.1 148544825 5188147 1674881..1676071 1 NC_009513.1 ATPase AAA 1676071 5188147 Lreu_1618 Lactobacillus reuteri DSM 20016 ATPase AAA YP_001272195.1 1674881 D 557436 CDS YP_001272196.1 148544826 5188378 complement(1676068..1676991) 1 NC_009513.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 1676991 5188378 Lreu_1619 Lactobacillus reuteri DSM 20016 pantothenate kinase YP_001272196.1 1676068 R 557436 CDS YP_001272197.1 148544827 5189180 complement(1677182..1679278) 1 NC_009513.1 PFAM: sulfatase; sulfatase 1679278 5189180 Lreu_1620 Lactobacillus reuteri DSM 20016 sulfatase YP_001272197.1 1677182 R 557436 CDS YP_001272198.1 148544828 5188882 1679489..1680358 1 NC_009513.1 PFAM: protein of unknown function DUF6, transmembrane; hypothetical protein 1680358 5188882 Lreu_1621 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272198.1 1679489 D 557436 CDS YP_001272199.1 148544829 5188547 complement(1680398..1680634) 1 NC_009513.1 hypothetical protein 1680634 5188547 Lreu_1622 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272199.1 1680398 R 557436 CDS YP_001272200.1 148544830 5189212 complement(1680806..1681981) 1 NC_009513.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase, IS891/IS1136/IS1341 family; transposase, IS605 OrfB; IS605 family transposase OrfB 1681981 5189212 Lreu_1623 Lactobacillus reuteri DSM 20016 IS605 family transposase OrfB YP_001272200.1 1680806 R 557436 CDS YP_001272201.1 148544831 5189126 complement(1681981..1682325) 1 NC_009513.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 1682325 5189126 Lreu_1624 Lactobacillus reuteri DSM 20016 transposase IS200-family protein YP_001272201.1 1681981 R 557436 CDS YP_001272202.1 148544832 5188308 complement(1682533..1684839) 1 NC_009513.1 superfamily I DNA/RNA helicase-like protein 1684839 5188308 Lreu_1625 Lactobacillus reuteri DSM 20016 superfamily I DNA/RNA helicase-like protein YP_001272202.1 1682533 R 557436 CDS YP_001272203.1 148544833 5188601 1685059..1685709 1 NC_009513.1 PFAM: SNARE associated Golgi protein; hypothetical protein 1685709 5188601 Lreu_1626 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272203.1 1685059 D 557436 CDS YP_001272204.1 148544834 5188708 1685783..1686436 1 NC_009513.1 PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 1686436 5188708 Lreu_1627 Lactobacillus reuteri DSM 20016 phosphoglycerate mutase YP_001272204.1 1685783 D 557436 CDS YP_001272205.1 148544835 5188309 1686466..1687743 1 NC_009513.1 PFAM: GTP-binding protein, HSR1-related; HSR1-like GTP-binding protein 1687743 5188309 Lreu_1628 Lactobacillus reuteri DSM 20016 HSR1-like GTP-binding protein YP_001272205.1 1686466 D 557436 CDS YP_001272206.1 148544836 5189225 complement(1687790..1688041) 1 NC_009513.1 PFAM: Transglycosylase-associated protein; transglycosylase-associated protein 1688041 5189225 Lreu_1629 Lactobacillus reuteri DSM 20016 transglycosylase-associated protein YP_001272206.1 1687790 R 557436 CDS YP_001272207.1 148544837 5189325 complement(1688044..1688241) 1 NC_009513.1 PFAM: CsbD family protein; CsbD family protein 1688241 5189325 Lreu_1630 Lactobacillus reuteri DSM 20016 CsbD family protein YP_001272207.1 1688044 R 557436 CDS YP_001272208.1 148544838 5188210 complement(1688460..1689452) 1 NC_009513.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 1689452 5188210 Lreu_1631 Lactobacillus reuteri DSM 20016 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit YP_001272208.1 1688460 R 557436 CDS YP_001272209.1 148544839 5189346 complement(1689584..1692451) 1 NC_009513.1 hypothetical protein 1692451 5189346 Lreu_1632 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272209.1 1689584 R 557436 CDS YP_001272210.1 148544840 5189331 complement(1692488..1693024) 1 NC_009513.1 PFAM: regulatory protein, TetR; TetR family transcriptional regulator 1693024 5189331 Lreu_1633 Lactobacillus reuteri DSM 20016 TetR family transcriptional regulator YP_001272210.1 1692488 R 557436 CDS YP_001272211.1 148544841 5188206 1693333..1693584 1 NC_009513.1 PFAM: PspC domain protein; phage shock protein C 1693584 5188206 Lreu_1634 Lactobacillus reuteri DSM 20016 phage shock protein C YP_001272211.1 1693333 D 557436 CDS YP_001272212.1 148544842 5188306 complement(1693639..1694478) 1 NC_009513.1 hypothetical protein 1694478 5188306 Lreu_1635 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272212.1 1693639 R 557436 CDS YP_001272213.1 148544843 5188627 complement(1694497..1694976) 1 NC_009513.1 hypothetical protein 1694976 5188627 Lreu_1636 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272213.1 1694497 R 557436 CDS YP_001272214.1 148544844 5189142 complement(1695036..1695473) 1 NC_009513.1 PFAM: ferric-uptake regulator; ferric uptake regulator family protein 1695473 5189142 Lreu_1637 Lactobacillus reuteri DSM 20016 ferric uptake regulator family protein YP_001272214.1 1695036 R 557436 CDS YP_001272215.1 148544845 5188300 complement(1695513..1696085) 1 NC_009513.1 PFAM: guanylate kinase; SMART: AAA ATPase; guanylate kinase/L-type calcium channel region; guanylate kinase 1696085 5188300 Lreu_1638 Lactobacillus reuteri DSM 20016 guanylate kinase YP_001272215.1 1695513 R 557436 CDS YP_001272216.1 148544846 5188243 complement(1696092..1696502) 1 NC_009513.1 PFAM: NUDIX hydrolase; NUDIX hydrolase 1696502 5188243 Lreu_1639 Lactobacillus reuteri DSM 20016 NUDIX hydrolase YP_001272216.1 1696092 R 557436 CDS YP_001272217.1 148544847 5188233 1696631..1698022 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 1698022 5188233 Lreu_1640 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001272217.1 1696631 D 557436 CDS YP_001272218.1 148544848 5188445 1698198..1699502 1 NC_009513.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; major facilitator superfamily transporter 1699502 5188445 Lreu_1641 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001272218.1 1698198 D 557436 CDS YP_001272219.1 148544849 5188519 complement(1699583..1700875) 1 NC_009513.1 hypothetical protein 1700875 5188519 Lreu_1642 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272219.1 1699583 R 557436 CDS YP_001272220.1 148544850 5188279 complement(1700993..1702066) 1 NC_009513.1 PFAM: extracellular solute-binding protein, family 1; extracellular solute-binding protein 1702066 5188279 Lreu_1643 Lactobacillus reuteri DSM 20016 extracellular solute-binding protein YP_001272220.1 1700993 R 557436 CDS YP_001272221.1 148544851 5188480 complement(1702063..1702881) 1 NC_009513.1 PFAM: binding-protein-dependent transport systems inner membrane component; ornithine carbamoyltransferase 1702881 5188480 Lreu_1644 Lactobacillus reuteri DSM 20016 ornithine carbamoyltransferase YP_001272221.1 1702063 R 557436 CDS YP_001272222.1 148544852 5188557 complement(1702881..1703687) 1 NC_009513.1 PFAM: binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1703687 5188557 Lreu_1645 Lactobacillus reuteri DSM 20016 binding-protein-dependent transport system inner membrane protein YP_001272222.1 1702881 R 557436 CDS YP_001272223.1 148544853 5189271 complement(1703687..1704778) 1 NC_009513.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 1704778 5189271 Lreu_1646 Lactobacillus reuteri DSM 20016 spermidine/putrescine ABC transporter ATPase YP_001272223.1 1703687 R 557436 CDS YP_001272224.1 148544854 5189206 1704918..1707320 1 NC_009513.1 catalyzes the removal of N-terminal dipeptides when proline is the penultimate residue; x-prolyl-dipeptidyl aminopeptidase 1707320 5189206 Lreu_1647 Lactobacillus reuteri DSM 20016 x-prolyl-dipeptidyl aminopeptidase YP_001272224.1 1704918 D 557436 CDS YP_001272225.1 148544855 5189107 1707421..1708332 1 NC_009513.1 TIGRFAM: proline-specific peptidase; PFAM: alpha/beta hydrolase fold; proline-specific peptidase 1708332 5189107 Lreu_1648 Lactobacillus reuteri DSM 20016 proline-specific peptidase YP_001272225.1 1707421 D 557436 CDS YP_001272226.1 148544856 5189249 1708568..1711231 1 NC_009513.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; P-type HAD superfamily ATPase 1711231 5189249 Lreu_1649 Lactobacillus reuteri DSM 20016 P-type HAD superfamily ATPase YP_001272226.1 1708568 D 557436 CDS YP_001272227.1 148544857 5188439 1711374..1711841 1 NC_009513.1 PFAM: Ferritin, Dps family protein; Ferritin, Dps family protein 1711841 5188439 Lreu_1650 Lactobacillus reuteri DSM 20016 Ferritin, Dps family protein YP_001272227.1 1711374 D 557436 CDS YP_001272228.1 148544858 5188200 complement(1711922..1713322) 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 1713322 5188200 Lreu_1651 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001272228.1 1711922 R 557436 CDS YP_001272229.1 148544859 5189348 1713463..1714110 1 NC_009513.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase 1714110 5189348 Lreu_1652 Lactobacillus reuteri DSM 20016 HAD family hydrolase YP_001272229.1 1713463 D 557436 CDS YP_001272230.1 148544860 5189167 complement(1714342..1714566) 1 NC_009513.1 hypothetical protein 1714566 5189167 Lreu_1653 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272230.1 1714342 R 557436 CDS YP_001272231.1 148544861 5189124 1715079..1715435 1 NC_009513.1 hypothetical protein 1715435 5189124 Lreu_1655 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272231.1 1715079 D 557436 CDS YP_001272232.1 148544862 5188606 1715612..1716283 1 NC_009513.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 1716283 5188606 Lreu_1656 Lactobacillus reuteri DSM 20016 integrase catalytic subunit YP_001272232.1 1715612 D 557436 CDS YP_001272233.1 148544863 5189025 complement(1716553..1717551) 1 NC_009513.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1717551 5189025 Lreu_1657 Lactobacillus reuteri DSM 20016 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001272233.1 1716553 R 557436 CDS YP_001272234.1 148544864 5188690 1717716..1718678 1 NC_009513.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 1718678 5188690 Lreu_1658 Lactobacillus reuteri DSM 20016 inosine/uridine-preferring nucleoside hydrolase YP_001272234.1 1717716 D 557436 CDS YP_001272235.1 148544865 5188483 1718970..1719725 1 NC_009513.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; short-chain dehydrogenase/reductase SDR 1719725 5188483 Lreu_1659 Lactobacillus reuteri DSM 20016 short-chain dehydrogenase/reductase SDR YP_001272235.1 1718970 D 557436 CDS YP_001272236.1 148544866 5189200 complement(1719778..1720563) 1 NC_009513.1 PFAM: protein of unknown function DUF81; hypothetical protein 1720563 5189200 Lreu_1660 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272236.1 1719778 R 557436 CDS YP_001272237.1 148544867 5188620 1720830..1721390 1 NC_009513.1 hypothetical protein 1721390 5188620 Lreu_1661 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272237.1 1720830 D 557436 CDS YP_001272238.1 148544868 5189129 1721395..1722777 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 1722777 5189129 Lreu_1662 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001272238.1 1721395 D 557436 CDS YP_001272239.1 148544869 5189052 1722767..1723420 1 NC_009513.1 PFAM: cobalt transport protein; cobalt transport protein 1723420 5189052 Lreu_1663 Lactobacillus reuteri DSM 20016 cobalt transport protein YP_001272239.1 1722767 D 557436 CDS YP_001272240.1 148544870 5189185 1723462..1723803 1 NC_009513.1 hypothetical protein 1723803 5189185 Lreu_1664 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272240.1 1723462 D 557436 CDS YP_001272241.1 148544871 5189020 1723893..1725854 1 NC_009513.1 PFAM: sodium/hydrogen exchanger; sodium/hydrogen exchanger 1725854 5189020 Lreu_1665 Lactobacillus reuteri DSM 20016 sodium/hydrogen exchanger YP_001272241.1 1723893 D 557436 CDS YP_001272242.1 148544872 5189199 complement(1725902..1726258) 1 NC_009513.1 PFAM: protein of unknown function DUF1304; hypothetical protein 1726258 5189199 Lreu_1666 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272242.1 1725902 R 557436 CDS YP_001272243.1 148544873 5189019 complement(1726272..1727123) 1 NC_009513.1 alpha/beta fold family hydrolase-like protein 1727123 5189019 Lreu_1667 Lactobacillus reuteri DSM 20016 alpha/beta fold family hydrolase-like protein YP_001272243.1 1726272 R 557436 CDS YP_001272244.1 148544874 5188793 1727373..1727786 1 NC_009513.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 1727786 5188793 Lreu_1668 Lactobacillus reuteri DSM 20016 XRE family transcriptional regulator YP_001272244.1 1727373 D 557436 CDS YP_001272245.1 148544875 5189187 1727797..1728654 1 NC_009513.1 hypothetical protein 1728654 5189187 Lreu_1669 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272245.1 1727797 D 557436 CDS YP_001272246.1 148544876 5188760 complement(1728709..1729695) 1 NC_009513.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 1729695 5188760 Lreu_1670 Lactobacillus reuteri DSM 20016 alcohol dehydrogenase YP_001272246.1 1728709 R 557436 CDS YP_001272247.1 148544877 5188961 complement(1729741..1731153) 1 NC_009513.1 PFAM: PTS system Galactitol-specific IIC component; PTS system galactitol-specific transporter subunit IIC 1731153 5188961 Lreu_1671 Lactobacillus reuteri DSM 20016 PTS system galactitol-specific transporter subunit IIC YP_001272247.1 1729741 R 557436 CDS YP_001272248.1 148544878 5188831 1731307..1732476 1 NC_009513.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; major facilitator superfamily transporter 1732476 5188831 Lreu_1672 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001272248.1 1731307 D 557436 CDS YP_001272249.1 148544879 5188355 1732649..1733530 1 NC_009513.1 PFAM: helix-turn-helix domain protein; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 1733530 5188355 Lreu_1673 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001272249.1 1732649 D 557436 CDS YP_001272250.1 148544880 5189997 1733541..1734251 1 NC_009513.1 hypothetical protein 1734251 5189997 Lreu_1674 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272250.1 1733541 D 557436 CDS YP_001272251.1 148544881 5189832 complement(1734485..1734943) 1 NC_009513.1 hypothetical protein 1734943 5189832 Lreu_1675 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272251.1 1734485 R 557436 CDS YP_001272252.1 148544882 5189022 complement(1734940..1735347) 1 NC_009513.1 hypothetical protein 1735347 5189022 Lreu_1676 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272252.1 1734940 R 557436 CDS YP_001272253.1 148544883 5189988 complement(1735477..1736490) 1 NC_009513.1 TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: biotin/lipoate A/B protein ligase; lipoate-protein ligase 1736490 5189988 Lreu_1677 Lactobacillus reuteri DSM 20016 lipoate-protein ligase YP_001272253.1 1735477 R 557436 CDS YP_001272254.1 148544884 5188877 1736691..1737158 1 NC_009513.1 PFAM: UspA domain protein; UspA domain-containing protein 1737158 5188877 Lreu_1678 Lactobacillus reuteri DSM 20016 UspA domain-containing protein YP_001272254.1 1736691 D 557436 CDS YP_001272255.1 148544885 5189790 1737170..1739098 1 NC_009513.1 TIGRFAM: small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; translation elongation factor 2 (EF-2/EF-G) 1739098 5189790 Lreu_1679 Lactobacillus reuteri DSM 20016 translation elongation factor 2 (EF-2/EF-G) YP_001272255.1 1737170 D 557436 CDS YP_001272256.1 148544886 5188940 complement(1739165..1740067) 1 NC_009513.1 PFAM: ROK family protein; transcriptional regulator 1740067 5188940 Lreu_1680 Lactobacillus reuteri DSM 20016 transcriptional regulator YP_001272256.1 1739165 R 557436 CDS YP_001272257.1 148544887 5188724 complement(1740093..1741445) 1 NC_009513.1 PFAM: branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein 1741445 5188724 Lreu_1681 Lactobacillus reuteri DSM 20016 branched-chain amino acid transport system II carrier protein YP_001272257.1 1740093 R 557436 CDS YP_001272258.1 148544888 5189921 complement(1741530..1741979) 1 NC_009513.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 1741979 5189921 Lreu_1682 Lactobacillus reuteri DSM 20016 transposase IS200-family protein YP_001272258.1 1741530 R 557436 CDS YP_001272259.1 148544889 5188765 1742054..1743304 1 NC_009513.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase, IS891/IS1136/IS1341 family; transposase, IS605 OrfB; IS605 family transposase OrfB 1743304 5188765 Lreu_1683 Lactobacillus reuteri DSM 20016 IS605 family transposase OrfB YP_001272259.1 1742054 D 557436 CDS YP_001272260.1 148544890 5188763 complement(1743710..1744456) 1 NC_009513.1 alpha/beta fold family hydrolase-like protein 1744456 5188763 Lreu_1684 Lactobacillus reuteri DSM 20016 alpha/beta fold family hydrolase-like protein YP_001272260.1 1743710 R 557436 CDS YP_001272261.1 148544891 5188982 complement(1744491..1745846) 1 NC_009513.1 PFAM: amino acid permease-associated region; amino acid permease-associated protein 1745846 5188982 Lreu_1685 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001272261.1 1744491 R 557436 CDS YP_001272262.1 148544892 5188823 complement(1746023..1748434) 1 NC_009513.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; phosphoketolase 1748434 5188823 Lreu_1686 Lactobacillus reuteri DSM 20016 phosphoketolase YP_001272262.1 1746023 R 557436 CDS YP_001272263.1 148544893 5188900 complement(1748704..1749435) 1 NC_009513.1 PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; GntR family transcriptional regulator 1749435 5188900 Lreu_1687 Lactobacillus reuteri DSM 20016 GntR family transcriptional regulator YP_001272263.1 1748704 R 557436 CDS YP_001272264.1 148544894 5188902 1749567..1750073 1 NC_009513.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; ybaK/ebsC protein 1750073 5188902 Lreu_1688 Lactobacillus reuteri DSM 20016 ybaK/ebsC protein YP_001272264.1 1749567 D 557436 CDS YP_001272265.1 148544895 5188922 1750161..1751597 1 NC_009513.1 PFAM: peptidase U34, dipeptidase; peptidase U34, dipeptidase 1751597 5188922 Lreu_1689 Lactobacillus reuteri DSM 20016 peptidase U34, dipeptidase YP_001272265.1 1750161 D 557436 CDS YP_001272266.1 148544896 5188744 complement(1751656..1753479) 1 NC_009513.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 1753479 5188744 Lreu_1690 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001272266.1 1751656 R 557436 CDS YP_001272267.1 148544897 5189006 complement(1753472..1755214) 1 NC_009513.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 1755214 5189006 Lreu_1691 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001272267.1 1753472 R 557436 CDS YP_001272268.1 148544898 5189337 1755384..1756388 1 NC_009513.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit 1756388 5189337 Lreu_1692 Lactobacillus reuteri DSM 20016 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit YP_001272268.1 1755384 D 557436 CDS YP_001272269.1 148544899 5189960 complement(1756450..1756983) 1 NC_009513.1 hypothetical protein 1756983 5189960 Lreu_1693 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272269.1 1756450 R 557436 CDS YP_001272270.1 148544900 5188901 complement(1756985..1757365) 1 NC_009513.1 hypothetical protein 1757365 5188901 Lreu_1694 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272270.1 1756985 R 557436 CDS YP_001272271.1 148544901 5189004 complement(1757654..1758706) 1 NC_009513.1 PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1758706 5189004 Lreu_1695 Lactobacillus reuteri DSM 20016 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_001272271.1 1757654 R 557436 CDS YP_001272272.1 148544902 5189967 complement(1758708..1759418) 1 NC_009513.1 hypothetical protein 1759418 5189967 Lreu_1696 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272272.1 1758708 R 557436 CDS YP_001272273.1 148544903 5189954 complement(1759455..1760045) 1 NC_009513.1 PFAM: Phosphoglycerate mutase; alpha-ribazole phosphatase 1760045 5189954 Lreu_1697 Lactobacillus reuteri DSM 20016 alpha-ribazole phosphatase YP_001272273.1 1759455 R 557436 CDS YP_001272274.1 148544904 5189961 complement(1760042..1760803) 1 NC_009513.1 PFAM: cobalamin-5-phosphate synthase CobS; cobalamin-5'-phosphate synthase 1760803 5189961 Lreu_1698 Lactobacillus reuteri DSM 20016 cobalamin-5'-phosphate synthase YP_001272274.1 1760042 R 557436 CDS YP_001272275.1 148544905 5189719 complement(1760812..1761402) 1 NC_009513.1 PFAM: cobalbumin biosynthesis protein; adenosylcobinamide kinase 1761402 5189719 Lreu_1699 Lactobacillus reuteri DSM 20016 adenosylcobinamide kinase YP_001272275.1 1760812 R 557436 CDS YP_001272276.1 148544906 5188957 complement(1761465..1762760) 1 NC_009513.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 1762760 5188957 Lreu_1700 Lactobacillus reuteri DSM 20016 glutamate-1-semialdehyde aminotransferase YP_001272276.1 1761465 R 557436 CDS YP_001272277.1 148544907 5190001 complement(1762780..1763751) 1 NC_009513.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1763751 5190001 Lreu_1701 Lactobacillus reuteri DSM 20016 delta-aminolevulinic acid dehydratase YP_001272277.1 1762780 R 557436 CDS YP_001272278.1 148544908 5189323 complement(1763757..1764674) 1 NC_009513.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 1764674 hemC 5189323 hemC Lactobacillus reuteri DSM 20016 porphobilinogen deaminase YP_001272278.1 1763757 R 557436 CDS YP_001272279.1 148544909 5189985 complement(1764664..1765929) 1 NC_009513.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 1765929 hemA 5189985 hemA Lactobacillus reuteri DSM 20016 glutamyl-tRNA reductase YP_001272279.1 1764664 R 557436 CDS YP_001272280.1 148544910 5189718 complement(1765931..1766389) 1 NC_009513.1 siroheme synthase 1766389 5189718 Lreu_1704 Lactobacillus reuteri DSM 20016 siroheme synthase YP_001272280.1 1765931 R 557436 CDS YP_001272281.1 148544911 5189994 complement(1766404..1767909) 1 NC_009513.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 1767909 5189994 Lreu_1705 Lactobacillus reuteri DSM 20016 cobyric acid synthase YP_001272281.1 1766404 R 557436 CDS YP_001272282.1 148544912 5188937 complement(1767984..1768787) 1 NC_009513.1 TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; cobalt ABC transporter ATPase 1768787 5188937 Lreu_1706 Lactobacillus reuteri DSM 20016 cobalt ABC transporter ATPase YP_001272282.1 1767984 R 557436 CDS YP_001272283.1 148544913 5188873 complement(1768799..1769476) 1 NC_009513.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; cobalt ABC transporter inner membrane protein CbiQ 1769476 5188873 Lreu_1707 Lactobacillus reuteri DSM 20016 cobalt ABC transporter inner membrane protein CbiQ YP_001272283.1 1768799 R 557436 CDS YP_001272284.1 148544914 5189973 complement(1769497..1769808) 1 NC_009513.1 PFAM: Cobalt transport protein CbiN; cobalt transport protein CbiN 1769808 5189973 Lreu_1708 Lactobacillus reuteri DSM 20016 cobalt transport protein CbiN YP_001272284.1 1769497 R 557436 CDS YP_001272285.1 148544915 5189971 complement(1769805..1770551) 1 NC_009513.1 TIGRFAM: cobalamin biosynthesis protein CbiM; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; cobalamin biosynthesis protein CbiM 1770551 5189971 Lreu_1709 Lactobacillus reuteri DSM 20016 cobalamin biosynthesis protein CbiM YP_001272285.1 1769805 R 557436 CDS YP_001272286.1 148544916 5188875 complement(1770535..1771248) 1 NC_009513.1 catalyzes the formation of precorrin-3A from precorrin-2; cobalt-precorrin-2 C(20)-methyltransferase 1771248 5188875 Lreu_1710 Lactobacillus reuteri DSM 20016 cobalt-precorrin-2 C(20)-methyltransferase YP_001272286.1 1770535 R 557436 CDS YP_001272287.1 148544917 5189335 complement(1771250..1772029) 1 NC_009513.1 PFAM: anaerobic cobalt chelatase; anaerobic cobaltochelatase 1772029 5189335 Lreu_1711 Lactobacillus reuteri DSM 20016 anaerobic cobaltochelatase YP_001272287.1 1771250 R 557436 CDS YP_001272288.1 148544918 5189372 complement(1772022..1773416) 1 NC_009513.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrinogen-III C-methyltransferase 1773416 5189372 Lreu_1712 Lactobacillus reuteri DSM 20016 uroporphyrinogen-III C-methyltransferase YP_001272288.1 1772022 R 557436 CDS YP_001272289.1 148544919 5189999 complement(1773406..1774164) 1 NC_009513.1 TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; precorrin-6A reductase 1774164 5189999 Lreu_1713 Lactobacillus reuteri DSM 20016 precorrin-6A reductase YP_001272289.1 1773406 R 557436 CDS YP_001272290.1 148544920 5190034 complement(1774161..1774886) 1 NC_009513.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-3 methyltransferase 1774886 5190034 Lreu_1714 Lactobacillus reuteri DSM 20016 precorrin-3 methyltransferase YP_001272290.1 1774161 R 557436 CDS YP_001272291.1 148544921 5188429 complement(1774899..1775954) 1 NC_009513.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; cobalamin (vitamin B12) biosynthesis protein CbiG 1775954 5188429 Lreu_1715 Lactobacillus reuteri DSM 20016 cobalamin (vitamin B12) biosynthesis protein CbiG YP_001272291.1 1774899 R 557436 CDS YP_001272292.1 148544922 5189682 complement(1775957..1776718) 1 NC_009513.1 TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-4 C(11)-methyltransferase 1776718 5189682 Lreu_1716 Lactobacillus reuteri DSM 20016 precorrin-4 C(11)-methyltransferase YP_001272292.1 1775957 R 557436 CDS YP_001272293.1 148544923 5189846 complement(1776735..1777289) 1 NC_009513.1 catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W; decarboxylating; cobalt-precorrin-6Y C(15)-methyltransferase 1777289 5189846 Lreu_1717 Lactobacillus reuteri DSM 20016 cobalt-precorrin-6Y C(15)-methyltransferase YP_001272293.1 1776735 R 557436 CDS YP_001272294.1 148544924 5189989 complement(1777282..1777884) 1 NC_009513.1 catalyzes the methylation of C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W-a; cobalt-precorrin-6Y C(5)-methyltransferase 1777884 5189989 Lreu_1718 Lactobacillus reuteri DSM 20016 cobalt-precorrin-6Y C(5)-methyltransferase YP_001272294.1 1777282 R 557436 CDS YP_001272295.1 148544925 5190025 complement(1777881..1779032) 1 NC_009513.1 Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 1779032 cbiD 5190025 cbiD Lactobacillus reuteri DSM 20016 cobalt-precorrin-6A synthase YP_001272295.1 1777881 R 557436 CDS YP_001272296.1 148544926 5189962 complement(1779013..1779696) 1 NC_009513.1 catalyzes the interconversion of cobalt-precorrin-8X and cobyrinic acid in the anaerobic biosynthesis of cobalamin; cobalt-precorrin-8X methylmutase 1779696 cbiC 5189962 cbiC Lactobacillus reuteri DSM 20016 cobalt-precorrin-8X methylmutase YP_001272296.1 1779013 R 557436 CDS YP_001272297.1 148544927 5188933 complement(1779702..1780661) 1 NC_009513.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; adenosylcobinamide-phosphate synthase 1780661 5188933 Lreu_1721 Lactobacillus reuteri DSM 20016 adenosylcobinamide-phosphate synthase YP_001272297.1 1779702 R 557436 CDS YP_001272298.1 148544928 5188305 complement(1780658..1782022) 1 NC_009513.1 TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid a,c-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; cobyrinate a,c-diamide synthase / hydrogenobyrinic acid a,c-diamide synthase 1782022 5188305 Lreu_1722 Lactobacillus reuteri DSM 20016 cobyrinate a,c-diamide synthase / hydrogenobyrinic acid a,c-diamide synthase YP_001272298.1 1780658 R 557436 CDS YP_001272299.1 148544929 5189024 complement(1782022..1783110) 1 NC_009513.1 TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase, class I and II; L-threonine O-3-phosphate decarboxylase 1783110 5189024 Lreu_1723 Lactobacillus reuteri DSM 20016 L-threonine O-3-phosphate decarboxylase YP_001272299.1 1782022 R 557436 CDS YP_001272300.1 148544930 5188930 complement(1783455..1784423) 1 NC_009513.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 1784423 5188930 Lreu_1724 Lactobacillus reuteri DSM 20016 integrase catalytic subunit YP_001272300.1 1783455 R 557436 CDS YP_001272301.1 148544931 5188711 1784552..1785118 1 NC_009513.1 TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; ATP:cob(I)alamin adenosyltransferase 1785118 5188711 Lreu_1725 Lactobacillus reuteri DSM 20016 ATP:cob(I)alamin adenosyltransferase YP_001272301.1 1784552 D 557436 CDS YP_001272302.1 148544932 5190147 complement(1785166..1786008) 1 NC_009513.1 PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 1786008 5190147 Lreu_1726 Lactobacillus reuteri DSM 20016 NADPH-dependent FMN reductase YP_001272302.1 1785166 R 557436 CDS YP_001272303.1 148544933 5188729 complement(1786030..1786479) 1 NC_009513.1 PFAM: flavodoxin/nitric oxide synthase; flavodoxin/nitric oxide synthase 1786479 5188729 Lreu_1727 Lactobacillus reuteri DSM 20016 flavodoxin/nitric oxide synthase YP_001272303.1 1786030 R 557436 CDS YP_001272304.1 148544934 5188418 1786586..1787014 1 NC_009513.1 TIGRFAM: ethanolamine utilization protein, EutP; ethanolamine utilization protein, EutP 1787014 5188418 Lreu_1728 Lactobacillus reuteri DSM 20016 ethanolamine utilization protein, EutP YP_001272304.1 1786586 D 557436 CDS YP_001272305.1 148544935 5188624 complement(1787007..1787564) 1 NC_009513.1 hypothetical protein 1787564 5188624 Lreu_1729 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272305.1 1787007 R 557436 CDS YP_001272306.1 148544936 5188379 complement(1787561..1788205) 1 NC_009513.1 PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 1788205 5188379 Lreu_1730 Lactobacillus reuteri DSM 20016 phosphoglycerate mutase YP_001272306.1 1787561 R 557436 CDS YP_001272307.1 148544937 5188632 complement(1788302..1789096) 1 NC_009513.1 protein tyrosine phosphatase 1789096 5188632 Lreu_1731 Lactobacillus reuteri DSM 20016 protein tyrosine phosphatase YP_001272307.1 1788302 R 557436 CDS YP_001272308.1 148544938 5188329 complement(1789169..1789516) 1 NC_009513.1 PFAM: microcompartments protein; microcompartments protein 1789516 5188329 Lreu_1732 Lactobacillus reuteri DSM 20016 microcompartments protein YP_001272308.1 1789169 R 557436 CDS YP_001272309.1 148544939 5188168 complement(1789532..1790716) 1 NC_009513.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; acetate kinase 1790716 5188168 Lreu_1733 Lactobacillus reuteri DSM 20016 acetate kinase YP_001272309.1 1789532 R 557436 CDS YP_001272310.1 148544940 5188472 complement(1790740..1791861) 1 NC_009513.1 PFAM: iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1791861 5188472 Lreu_1734 Lactobacillus reuteri DSM 20016 iron-containing alcohol dehydrogenase YP_001272310.1 1790740 R 557436 CDS YP_001272311.1 148544941 5188648 complement(1791879..1793312) 1 NC_009513.1 PFAM: aldehyde dehydrogenase; 50S ribosomal protein L29 1793312 5188648 Lreu_1735 Lactobacillus reuteri DSM 20016 50S ribosomal protein L29 YP_001272311.1 1791879 R 557436 CDS YP_001272312.1 148544942 5188499 complement(1793315..1793788) 1 NC_009513.1 PFAM: protein of unknown function DUF336; ATP:cob(I)alamin adenosyltransferase 1793788 5188499 Lreu_1736 Lactobacillus reuteri DSM 20016 ATP:cob(I)alamin adenosyltransferase YP_001272312.1 1793315 R 557436 CDS YP_001272313.1 148544943 5189033 complement(1793791..1794378) 1 NC_009513.1 TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; ATP--cobalamin adenosyltransferase 1794378 5189033 Lreu_1737 Lactobacillus reuteri DSM 20016 ATP--cobalamin adenosyltransferase YP_001272313.1 1793791 R 557436 CDS YP_001272314.1 148544944 5188245 complement(1794399..1794671) 1 NC_009513.1 PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; ethanolamine utilization protein EutN/carboxysome structural protein Ccml 1794671 5188245 Lreu_1738 Lactobacillus reuteri DSM 20016 ethanolamine utilization protein EutN/carboxysome structural protein Ccml YP_001272314.1 1794399 R 557436 CDS YP_001272315.1 148544945 5189446 complement(1794659..1795162) 1 NC_009513.1 hypothetical protein 1795162 5189446 Lreu_1739 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272315.1 1794659 R 557436 CDS YP_001272316.1 148544946 5188149 complement(1795194..1795838) 1 NC_009513.1 PFAM: Propanediol utilization protein; propanediol utilization protein 1795838 5188149 Lreu_1740 Lactobacillus reuteri DSM 20016 propanediol utilization protein YP_001272316.1 1795194 R 557436 CDS YP_001272317.1 148544947 5188637 complement(1795867..1796157) 1 NC_009513.1 PFAM: microcompartments protein; microcompartments protein 1796157 5188637 Lreu_1741 Lactobacillus reuteri DSM 20016 microcompartments protein YP_001272317.1 1795867 R 557436 CDS YP_001272318.1 148544948 5188564 complement(1796170..1796739) 1 NC_009513.1 PFAM: microcompartments protein; microcompartments protein 1796739 5188564 Lreu_1742 Lactobacillus reuteri DSM 20016 microcompartments protein YP_001272318.1 1796170 R 557436 CDS YP_001272319.1 148544949 5188661 complement(1796747..1797106) 1 NC_009513.1 hypothetical protein 1797106 5188661 Lreu_1743 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272319.1 1796747 R 557436 CDS YP_001272320.1 148544950 5189289 complement(1797093..1798943) 1 NC_009513.1 PFAM: Diol/glycerol dehydratase reactivating factor, large subunit; diol/glycerol dehydratase reactivating factor, large subunit 1798943 5189289 Lreu_1744 Lactobacillus reuteri DSM 20016 diol/glycerol dehydratase reactivating factor, large subunit YP_001272320.1 1797093 R 557436 CDS YP_001272321.1 148544951 5189054 complement(1798974..1799492) 1 NC_009513.1 PFAM: dehydratase, small subunit; dehydratase, small subunit 1799492 5189054 Lreu_1745 Lactobacillus reuteri DSM 20016 dehydratase, small subunit YP_001272321.1 1798974 R 557436 CDS YP_001272322.1 148544952 5188296 complement(1799502..1800212) 1 NC_009513.1 PFAM: dehydratase, medium subunit; dehydratase, medium subunit 1800212 5188296 Lreu_1746 Lactobacillus reuteri DSM 20016 dehydratase, medium subunit YP_001272322.1 1799502 R 557436 CDS YP_001272323.1 148544953 5189036 complement(1800230..1801906) 1 NC_009513.1 PFAM: dehydratase, large subunit; glycerol dehydratase 1801906 5189036 Lreu_1747 Lactobacillus reuteri DSM 20016 glycerol dehydratase YP_001272323.1 1800230 R 557436 CDS YP_001272324.1 148544954 5188715 complement(1801931..1802647) 1 NC_009513.1 PFAM: microcompartments protein; microcompartments protein 1802647 5188715 Lreu_1748 Lactobacillus reuteri DSM 20016 microcompartments protein YP_001272324.1 1801931 R 557436 CDS YP_001272325.1 148544955 5188640 complement(1802745..1803026) 1 NC_009513.1 PFAM: microcompartments protein; microcompartments protein 1803026 5188640 Lreu_1749 Lactobacillus reuteri DSM 20016 microcompartments protein YP_001272325.1 1802745 R 557436 CDS YP_001272326.1 148544956 5188667 1803280..1804359 1 NC_009513.1 PFAM: helix-turn-helix- domain containing protein, AraC type; AraC family transcriptional regulator 1804359 5188667 Lreu_1750 Lactobacillus reuteri DSM 20016 AraC family transcriptional regulator YP_001272326.1 1803280 D 557436 CDS YP_001272327.1 148544957 5188613 complement(1804400..1805233) 1 NC_009513.1 TIGRFAM: ethanolamine utilization protein EutJ family protein; ethanolamine utilization protein EutJ family protein 1805233 5188613 Lreu_1751 Lactobacillus reuteri DSM 20016 ethanolamine utilization protein EutJ family protein YP_001272327.1 1804400 R 557436 CDS YP_001272328.1 148544958 5189319 complement(1805318..1806025) 1 NC_009513.1 PFAM: major intrinsic protein; major intrinsic protein 1806025 5189319 Lreu_1752 Lactobacillus reuteri DSM 20016 major intrinsic protein YP_001272328.1 1805318 R 557436 CDS YP_001272329.1 148544959 5188339 complement(1806195..1807139) 1 NC_009513.1 hypothetical protein 1807139 5188339 Lreu_1753 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272329.1 1806195 R 557436 CDS YP_001272330.1 148544960 5188630 1807199..1808038 1 NC_009513.1 PFAM: Xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 1808038 5188630 Lreu_1754 Lactobacillus reuteri DSM 20016 xylose isomerase domain-containing protein YP_001272330.1 1807199 D 557436 CDS YP_001272331.1 148544961 5189125 1808041..1809159 1 NC_009513.1 PFAM: protein of unknown function UPF0118; hypothetical protein 1809159 5189125 Lreu_1755 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272331.1 1808041 D 557436 CDS YP_001272332.1 148544962 5188477 complement(1809309..1810034) 1 NC_009513.1 PFAM: B3/4 domain protein; B3/4 domain-containing protein 1810034 5188477 Lreu_1756 Lactobacillus reuteri DSM 20016 B3/4 domain-containing protein YP_001272332.1 1809309 R 557436 CDS YP_001272333.1 148544963 5189763 complement(1810058..1810510) 1 NC_009513.1 PFAM: regulatory protein, MarR; MarR family transcriptional regulator 1810510 5189763 Lreu_1757 Lactobacillus reuteri DSM 20016 MarR family transcriptional regulator YP_001272333.1 1810058 R 557436 CDS YP_001272334.1 148544964 5188748 complement(1810578..1811105) 1 NC_009513.1 PFAM: Domain of unknown function DUF1836; hypothetical protein 1811105 5188748 Lreu_1758 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272334.1 1810578 R 557436 CDS YP_001272335.1 148544965 5188631 complement(1811122..1811646) 1 NC_009513.1 hypothetical protein 1811646 5188631 Lreu_1759 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272335.1 1811122 R 557436 CDS YP_001272336.1 148544966 5189095 complement(1811664..1812527) 1 NC_009513.1 multidrug ABC transporter ATPase-like protein 1812527 5189095 Lreu_1760 Lactobacillus reuteri DSM 20016 multidrug ABC transporter ATPase-like protein YP_001272336.1 1811664 R 557436 CDS YP_001272337.1 148544967 5188311 1812685..1814028 1 NC_009513.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; hypothetical protein 1814028 5188311 Lreu_1761 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272337.1 1812685 D 557436 CDS YP_001272338.1 148544968 5188673 1814140..1814607 1 NC_009513.1 PFAM: NrdI family protein; NrdI family protein 1814607 5188673 Lreu_1762 Lactobacillus reuteri DSM 20016 NrdI family protein YP_001272338.1 1814140 D 557436 CDS YP_001272339.1 148544969 5189216 complement(1814657..1815082) 1 NC_009513.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase 1815082 5189216 Lreu_1763 Lactobacillus reuteri DSM 20016 3-demethylubiquinone-9 3-methyltransferase YP_001272339.1 1814657 R 557436 CDS YP_001272340.1 148544970 5189229 1815321..1816427 1 NC_009513.1 PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter 1816427 5189229 Lreu_1764 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001272340.1 1815321 D 557436 CDS YP_001272341.1 148544971 5188461 1816710..1818191 1 NC_009513.1 TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 1818191 5188461 Lreu_1765 Lactobacillus reuteri DSM 20016 glucose-6-phosphate 1-dehydrogenase YP_001272341.1 1816710 D 557436 CDS YP_001272342.1 148544972 5188221 1818335..1819771 1 NC_009513.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1819771 5188221 Lreu_1766 Lactobacillus reuteri DSM 20016 6-phosphogluconate dehydrogenase YP_001272342.1 1818335 D 557436 CDS YP_001272343.1 148544973 5189892 1819882..1820148 1 NC_009513.1 hypothetical protein 1820148 5189892 Lreu_1767 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272343.1 1819882 D 557436 CDS YP_001272344.1 148544974 5189224 1820271..1822223 1 NC_009513.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: sugar-specific permease, EIIA 1 domain; sugar (glycoside-Pentoside-hexuronide) transporter 1822223 5189224 Lreu_1768 Lactobacillus reuteri DSM 20016 sugar (glycoside-Pentoside-hexuronide) transporter YP_001272344.1 1820271 D 557436 CDS YP_001272345.1 148544975 5189207 complement(1822453..1822917) 1 NC_009513.1 PFAM: UspA domain protein; UspA domain-containing protein 1822917 5189207 Lreu_1769 Lactobacillus reuteri DSM 20016 UspA domain-containing protein YP_001272345.1 1822453 R 557436 CDS YP_001272346.1 148544976 5189702 1823131..1823601 1 NC_009513.1 PFAM: regulatory protein, AsnC/Lrp family; AsnC family transcriptional regulator 1823601 5189702 Lreu_1770 Lactobacillus reuteri DSM 20016 AsnC family transcriptional regulator YP_001272346.1 1823131 D 557436 CDS YP_001272347.1 148544977 5188359 complement(1823650..1824963) 1 NC_009513.1 PFAM: sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 1824963 5188359 Lreu_1771 Lactobacillus reuteri DSM 20016 sodium:dicarboxylate symporter YP_001272347.1 1823650 R 557436 CDS YP_001272348.1 148544978 5189075 1825213..1825839 1 NC_009513.1 PFAM: SNARE associated Golgi protein; hypothetical protein 1825839 5189075 Lreu_1772 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272348.1 1825213 D 557436 CDS YP_001272349.1 148544979 5188268 complement(1825854..1826303) 1 NC_009513.1 IS30 family transposase 1826303 5188268 Lreu_1773 Lactobacillus reuteri DSM 20016 IS30 family transposase YP_001272349.1 1825854 R 557436 CDS YP_001272350.1 148544980 5189130 complement(1826391..1826984) 1 NC_009513.1 IS30 family transposase 1826984 5189130 Lreu_1774 Lactobacillus reuteri DSM 20016 IS30 family transposase YP_001272350.1 1826391 R 557436 CDS YP_001272351.1 148544981 5189254 complement(1827184..1828176) 1 NC_009513.1 PFAM: regulatory protein, LacI; LacI family transcriptional regulator 1828176 5189254 Lreu_1775 Lactobacillus reuteri DSM 20016 LacI family transcriptional regulator YP_001272351.1 1827184 R 557436 CDS YP_001272352.1 148544982 5188417 complement(1828214..1829665) 1 NC_009513.1 catalyzes the formation of alpha-D-glucose 1-phosphate and UDP-galactose from UDP-glucose and alpha-D-galactose 1-phosphate in galactose metabolism; galactose-1-phosphate uridylyltransferase 1829665 5188417 Lreu_1776 Lactobacillus reuteri DSM 20016 galactose-1-phosphate uridylyltransferase YP_001272352.1 1828214 R 557436 CDS YP_001272353.1 148544983 5189339 complement(1829692..1830870) 1 NC_009513.1 catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase 1830870 5189339 Lreu_1777 Lactobacillus reuteri DSM 20016 galactokinase YP_001272353.1 1829692 R 557436 CDS YP_001272354.1 148544984 5189031 1831065..1832033 1 NC_009513.1 hypothetical protein 1832033 5189031 Lreu_1778 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272354.1 1831065 D 557436 CDS YP_001272355.1 148544985 5188320 1832063..1832845 1 NC_009513.1 protein tyrosine/serine phosphatase 1832845 5188320 Lreu_1779 Lactobacillus reuteri DSM 20016 protein tyrosine/serine phosphatase YP_001272355.1 1832063 D 557436 CDS YP_001272356.1 148544986 5189148 1832882..1833388 1 NC_009513.1 PFAM: PEBP family protein; PEBP family protein 1833388 5189148 Lreu_1780 Lactobacillus reuteri DSM 20016 PEBP family protein YP_001272356.1 1832882 D 557436 CDS YP_001272357.1 148544987 5188322 1833402..1833626 1 NC_009513.1 hypothetical protein 1833626 5188322 Lreu_1781 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272357.1 1833402 D 557436 CDS YP_001272358.1 148544988 5188702 complement(1833822..1834148) 1 NC_009513.1 hypothetical protein 1834148 5188702 Lreu_1782 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272358.1 1833822 R 557436 CDS YP_001272359.1 148544989 5188892 complement(1834172..1835293) 1 NC_009513.1 hypothetical protein 1835293 5188892 Lreu_1783 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272359.1 1834172 R 557436 CDS YP_001272360.1 148544990 5189273 1835400..1835897 1 NC_009513.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1835897 greA 5189273 greA Lactobacillus reuteri DSM 20016 transcription elongation factor GreA YP_001272360.1 1835400 D 557436 CDS YP_001272361.1 148544991 5190000 1836149..1836901 1 NC_009513.1 TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 1836901 5190000 Lreu_1785 Lactobacillus reuteri DSM 20016 nicotinamide mononucleotide transporter PnuC YP_001272361.1 1836149 D 557436 CDS YP_001272362.1 148544992 5189410 complement(1837095..1837937) 1 NC_009513.1 PFAM: aldo/keto reductase; aldo/keto reductase 1837937 5189410 Lreu_1786 Lactobacillus reuteri DSM 20016 aldo/keto reductase YP_001272362.1 1837095 R 557436 CDS YP_001272363.1 148544993 5189956 1838056..1838736 1 NC_009513.1 PFAM: response regulator receiver; transcriptional regulator domain protein; two component transcriptional regulator 1838736 5189956 Lreu_1787 Lactobacillus reuteri DSM 20016 two component transcriptional regulator YP_001272363.1 1838056 D 557436 CDS YP_001272364.1 148544994 5188939 1838729..1839709 1 NC_009513.1 PFAM: ATP-binding region, ATPase domain protein domain protein; integral membrane sensor signal transduction histidine kinase 1839709 5188939 Lreu_1788 Lactobacillus reuteri DSM 20016 integral membrane sensor signal transduction histidine kinase YP_001272364.1 1838729 D 557436 CDS YP_001272365.1 148544995 5189438 1839822..1840577 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 1840577 5189438 Lreu_1789 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001272365.1 1839822 D 557436 CDS YP_001272366.1 148544996 5189645 1840580..1842505 1 NC_009513.1 hypothetical protein 1842505 5189645 Lreu_1790 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272366.1 1840580 D 557436 CDS YP_001272367.1 148544997 5189501 1842746..1843573 1 NC_009513.1 PFAM: homoserine O-succinyltransferase; homoserine O-succinyltransferase 1843573 5189501 Lreu_1791 Lactobacillus reuteri DSM 20016 homoserine O-succinyltransferase YP_001272367.1 1842746 D 557436 CDS YP_001272368.1 148544998 5189472 1843579..1844502 1 NC_009513.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein, beta subunit; cysteine synthase 1844502 5189472 Lreu_1792 Lactobacillus reuteri DSM 20016 cysteine synthase YP_001272368.1 1843579 D 557436 CDS YP_001272369.1 148544999 5190108 complement(1844719..1846212) 1 NC_009513.1 PFAM: phospholipase D/Transphosphatidylase; phospholipase D/transphosphatidylase 1846212 5190108 Lreu_1793 Lactobacillus reuteri DSM 20016 phospholipase D/transphosphatidylase YP_001272369.1 1844719 R 557436 CDS YP_001272370.1 148545000 5190061 complement(1846288..1847448) 1 NC_009513.1 PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter 1847448 5190061 Lreu_1794 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001272370.1 1846288 R 557436 CDS YP_001272371.1 148545001 5189541 complement(1847550..1848053) 1 NC_009513.1 PFAM: Appr-1-p processing domain protein; appr-1-p processing domain-containing protein 1848053 5189541 Lreu_1795 Lactobacillus reuteri DSM 20016 appr-1-p processing domain-containing protein YP_001272371.1 1847550 R 557436 CDS YP_001272372.1 148545002 5190058 complement(1848059..1848679) 1 NC_009513.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 1848679 5190058 Lreu_1796 Lactobacillus reuteri DSM 20016 XRE family transcriptional regulator YP_001272372.1 1848059 R 557436 CDS YP_001272373.1 148545003 5188941 complement(1848823..1850727) 1 NC_009513.1 PFAM: peptidase M13, neprilysin; peptidase M13; endothelin-converting protein 1 1850727 5188941 Lreu_1797 Lactobacillus reuteri DSM 20016 endothelin-converting protein 1 YP_001272373.1 1848823 R 557436 CDS YP_001272374.1 148545004 5189381 complement(1850801..1851094) 1 NC_009513.1 hypothetical protein 1851094 5189381 Lreu_1798 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272374.1 1850801 R 557436 CDS YP_001272375.1 148545005 5189455 complement(1851098..1852390) 1 NC_009513.1 hypothetical protein 1852390 5189455 Lreu_1799 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272375.1 1851098 R 557436 CDS YP_001272376.1 148545006 5190019 complement(1852387..1853532) 1 NC_009513.1 hypothetical protein 1853532 5190019 Lreu_1800 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272376.1 1852387 R 557436 CDS YP_001272377.1 148545007 5189392 complement(1853536..1854168) 1 NC_009513.1 TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); DNA-3-methyladenine glycosylase 1854168 5189392 Lreu_1801 Lactobacillus reuteri DSM 20016 DNA-3-methyladenine glycosylase YP_001272377.1 1853536 R 557436 CDS YP_001272378.1 148545008 5189928 1854228..1854602 1 NC_009513.1 PFAM: protein of unknown function DUF488; hypothetical protein 1854602 5189928 Lreu_1802 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272378.1 1854228 D 557436 CDS YP_001272379.1 148545009 5189434 complement(1854894..1855067) 1 NC_009513.1 hypothetical protein 1855067 5189434 Lreu_1803 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272379.1 1854894 R 557436 CDS YP_001272380.1 148545010 5188869 complement(1855070..1855753) 1 NC_009513.1 PFAM: NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) 1855753 5188869 Lreu_1804 Lactobacillus reuteri DSM 20016 NAD(P)H dehydrogenase (quinone) YP_001272380.1 1855070 R 557436 CDS YP_001272381.1 148545011 5189515 complement(1855759..1856079) 1 NC_009513.1 hypothetical protein 1856079 5189515 Lreu_1805 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272381.1 1855759 R 557436 CDS YP_001272382.1 148545012 5189550 complement(1856110..1857069) 1 NC_009513.1 hypothetical protein 1857069 5189550 Lreu_1806 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272382.1 1856110 R 557436 CDS YP_001272383.1 148545013 5189978 complement(1857174..1858166) 1 NC_009513.1 hypothetical protein 1858166 5189978 Lreu_1807 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272383.1 1857174 R 557436 CDS YP_001272384.1 148545014 5190115 1858394..1858678 1 NC_009513.1 hypothetical protein 1858678 5190115 Lreu_1808 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272384.1 1858394 D 557436 CDS YP_001272385.1 148545015 5188979 complement(1858865..1859944) 1 NC_009513.1 PFAM: phosphoesterase, DHHA1; phosphoesterase, DHHA1 1859944 5188979 Lreu_1809 Lactobacillus reuteri DSM 20016 phosphoesterase, DHHA1 YP_001272385.1 1858865 R 557436 CDS YP_001272386.1 148545016 5188935 1860080..1861315 1 NC_009513.1 hypothetical protein 1861315 5188935 Lreu_1810 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272386.1 1860080 D 557436 CDS YP_001272387.1 148545017 5189957 1861670..1863055 1 NC_009513.1 PFAM: branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein 1863055 5189957 Lreu_1811 Lactobacillus reuteri DSM 20016 branched-chain amino acid transport system II carrier protein YP_001272387.1 1861670 D 557436 CDS YP_001272388.1 148545018 5189526 complement(1863128..1863721) 1 NC_009513.1 PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase 1863721 5189526 Lreu_1812 Lactobacillus reuteri DSM 20016 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase YP_001272388.1 1863128 R 557436 CDS YP_001272389.1 148545019 5189958 complement(1863798..1864577) 1 NC_009513.1 PFAM: protein of unknown function DUF1113; hypothetical protein 1864577 5189958 Lreu_1813 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272389.1 1863798 R 557436 CDS YP_001272390.1 148545020 5190022 complement(1864618..1866159) 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 1866159 5190022 Lreu_1814 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001272390.1 1864618 R 557436 CDS YP_001272391.1 148545021 5189622 1867868..1868491 1 NC_009513.1 hypothetical protein 1868491 5189622 Lreu_1815 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272391.1 1867868 D 557436 CDS YP_001272392.1 148545022 5190067 1869393..1870385 1 NC_009513.1 PFAM: NLP/P60 protein; Peptidoglycan-binding LysM; NLP/P60 protein 1870385 5190067 Lreu_1816 Lactobacillus reuteri DSM 20016 NLP/P60 protein YP_001272392.1 1869393 D 557436 CDS YP_001272393.1 148545023 5189625 1870760..1871755 1 NC_009513.1 PFAM: protein of unknown function DUF534; hypothetical protein 1871755 5189625 Lreu_1817 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272393.1 1870760 D 557436 CDS YP_001272394.1 148545024 5189744 1871752..1872651 1 NC_009513.1 PFAM: inner-membrane translocator; inner-membrane translocator 1872651 5189744 Lreu_1818 Lactobacillus reuteri DSM 20016 inner-membrane translocator YP_001272394.1 1871752 D 557436 CDS YP_001272395.1 148545025 5189374 1872644..1873408 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 1873408 5189374 Lreu_1819 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001272395.1 1872644 D 557436 CDS YP_001272396.1 148545026 5189574 1873476..1874039 1 NC_009513.1 permease cadmium resistance protein-like protein 1874039 5189574 Lreu_1820 Lactobacillus reuteri DSM 20016 permease cadmium resistance protein-like protein YP_001272396.1 1873476 D 557436 CDS YP_001272397.1 148545027 5190008 1874087..1874419 1 NC_009513.1 PFAM: regulatory protein, ArsR; ArsR family transcriptional regulator 1874419 5190008 Lreu_1821 Lactobacillus reuteri DSM 20016 ArsR family transcriptional regulator YP_001272397.1 1874087 D 557436 CDS YP_001272398.1 148545028 5190107 1874648..1875970 1 NC_009513.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 1875970 5190107 Lreu_1822 Lactobacillus reuteri DSM 20016 MATE efflux family protein YP_001272398.1 1874648 D 557436 CDS YP_001272399.1 148545029 5189443 complement(1876041..1876358) 1 NC_009513.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; thioredoxin 1876358 5189443 Lreu_1823 Lactobacillus reuteri DSM 20016 thioredoxin YP_001272399.1 1876041 R 557436 CDS YP_001272400.1 148545030 5190132 complement(1876360..1877115) 1 NC_009513.1 PFAM: Integral membrane protein TerC; integral membrane protein TerC 1877115 5190132 Lreu_1824 Lactobacillus reuteri DSM 20016 integral membrane protein TerC YP_001272400.1 1876360 R 557436 CDS YP_001272401.1 148545031 5189638 complement(1877134..1878054) 1 NC_009513.1 PFAM: pseudouridine synthase; pseudouridine synthase 1878054 5189638 Lreu_1825 Lactobacillus reuteri DSM 20016 pseudouridine synthase YP_001272401.1 1877134 R 557436 CDS YP_001272402.1 148545032 5190016 1878201..1879118 1 NC_009513.1 Mg2+ and Co2+ transporter-like protein 1879118 5190016 Lreu_1826 Lactobacillus reuteri DSM 20016 Mg2+ and Co2+ transporter-like protein YP_001272402.1 1878201 D 557436 CDS YP_001272403.1 148545033 5189990 complement(1879297..1880730) 1 NC_009513.1 PFAM: peptidase U34, dipeptidase; peptidase U34, dipeptidase 1880730 5189990 Lreu_1827 Lactobacillus reuteri DSM 20016 peptidase U34, dipeptidase YP_001272403.1 1879297 R 557436 CDS YP_001272404.1 148545034 5189587 1881099..1882427 1 NC_009513.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; uracil-xanthine permease 1882427 5189587 Lreu_1828 Lactobacillus reuteri DSM 20016 uracil-xanthine permease YP_001272404.1 1881099 D 557436 CDS YP_001272405.1 148545035 5189970 1882739..1884124 1 NC_009513.1 PFAM: Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 1884124 5189970 Lreu_1829 Lactobacillus reuteri DSM 20016 Na+/H+ antiporter NhaC YP_001272405.1 1882739 D 557436 CDS YP_001272406.1 148545036 5189992 complement(1884405..1885706) 1 NC_009513.1 TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase 1885706 5189992 Lreu_1830 Lactobacillus reuteri DSM 20016 histidyl-tRNA synthetase YP_001272406.1 1884405 R 557436 CDS YP_001272407.1 148545037 5189725 complement(1886035..1886559) 1 NC_009513.1 hypothetical protein 1886559 5189725 Lreu_1831 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272407.1 1886035 R 557436 CDS YP_001272408.1 148545038 5189585 complement(1886800..1887735) 1 NC_009513.1 TIGRFAM: histidine decarboxylase, pyruvoyl type; PFAM: histidine carboxylase, PI chain; histidine decarboxylase, pyruvoyl type 1887735 5189585 Lreu_1832 Lactobacillus reuteri DSM 20016 histidine decarboxylase, pyruvoyl type YP_001272408.1 1886800 R 557436 CDS YP_001272409.1 148545039 5189685 complement(1887992..1889446) 1 NC_009513.1 PFAM: amino acid permease-associated region; Amino acid transporter, transmembrane; amino acid permease-associated protein 1889446 5189685 Lreu_1833 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001272409.1 1887992 R 557436 CDS YP_001272410.1 148545040 5189636 complement(1889595..1890011) 1 NC_009513.1 hypothetical protein 1890011 5189636 Lreu_1834 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272410.1 1889595 R 557436 CDS YP_001272411.1 148545041 5189488 complement(1890035..1890979) 1 NC_009513.1 hypothetical protein 1890979 5189488 Lreu_1835 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272411.1 1890035 R 557436 CDS YP_001272412.1 148545042 5189751 complement(1891394..1892947) 1 NC_009513.1 PFAM: C4-dicarboxylate anaerobic carrier; Citrate transporter; C4-dicarboxylate anaerobic carrier 1892947 5189751 Lreu_1836 Lactobacillus reuteri DSM 20016 C4-dicarboxylate anaerobic carrier YP_001272412.1 1891394 R 557436 CDS YP_001272413.1 148545043 5189393 complement(1893116..1893769) 1 NC_009513.1 PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 1893769 5189393 Lreu_1837 Lactobacillus reuteri DSM 20016 phosphoglycerate mutase YP_001272413.1 1893116 R 557436 CDS YP_001272414.1 148545044 5190084 1893901..1894164 1 NC_009513.1 hypothetical protein 1894164 5190084 Lreu_1838 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272414.1 1893901 D 557436 CDS YP_001272415.1 148545045 5189510 1894290..1896419 1 NC_009513.1 PFAM: sulfatase; sulfatase 1896419 5189510 Lreu_1839 Lactobacillus reuteri DSM 20016 sulfatase YP_001272415.1 1894290 D 557436 CDS YP_001272416.1 148545046 5189697 1896578..1897699 1 NC_009513.1 PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; iron-containing alcohol dehydrogenase 1897699 5189697 Lreu_1840 Lactobacillus reuteri DSM 20016 iron-containing alcohol dehydrogenase YP_001272416.1 1896578 D 557436 CDS YP_001272417.1 148545047 5189471 complement(1897863..1898717) 1 NC_009513.1 PFAM: hydrolase family protein; hydrolase family protein 1898717 5189471 Lreu_1841 Lactobacillus reuteri DSM 20016 hydrolase family protein YP_001272417.1 1897863 R 557436 CDS YP_001272418.1 148545048 5188874 complement(1898785..1899996) 1 NC_009513.1 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; serine-type D-Ala-D-Ala carboxypeptidase 1899996 5188874 Lreu_1842 Lactobacillus reuteri DSM 20016 serine-type D-Ala-D-Ala carboxypeptidase YP_001272418.1 1898785 R 557436 CDS YP_001272419.1 148545049 5190002 1900067..1900648 1 NC_009513.1 hypothetical protein 1900648 5190002 Lreu_1843 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272419.1 1900067 D 557436 CDS YP_001272420.1 148545050 5190098 complement(1900847..1901503) 1 NC_009513.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 1901503 5190098 Lreu_1844 Lactobacillus reuteri DSM 20016 ErfK/YbiS/YcfS/YnhG family protein YP_001272420.1 1900847 R 557436 CDS YP_001272421.1 148545051 5189728 1903672..1904310 1 NC_009513.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family N-terminal domain protein; carbohydrate kinase 1904310 5189728 Lreu_1846 Lactobacillus reuteri DSM 20016 carbohydrate kinase YP_001272421.1 1903672 D 557436 CDS YP_001272422.1 148545052 5189720 1904414..1904908 1 NC_009513.1 hypothetical protein 1904908 5189720 Lreu_1847 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272422.1 1904414 D 557436 CDS YP_001272423.1 148545053 5190085 complement(1905034..1906311) 1 NC_009513.1 TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase 1906311 5190085 Lreu_1848 Lactobacillus reuteri DSM 20016 histidyl-tRNA synthetase YP_001272423.1 1905034 R 557436 CDS YP_001272424.1 148545054 5189448 complement(1906633..1907829) 1 NC_009513.1 PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter 1907829 5189448 Lreu_1849 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001272424.1 1906633 R 557436 CDS YP_001272425.1 148545055 5189977 complement(1907831..1908451) 1 NC_009513.1 hypothetical protein 1908451 5189977 Lreu_1850 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272425.1 1907831 R 557436 CDS YP_001272426.1 148545056 5189430 1908676..1908861 1 NC_009513.1 hypothetical protein 1908861 5189430 Lreu_1851 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272426.1 1908676 D 557436 CDS YP_001272427.1 148545057 5189972 complement(1908994..1909938) 1 NC_009513.1 PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 1909938 5189972 Lreu_1852 Lactobacillus reuteri DSM 20016 LacI family transcriptional regulator YP_001272427.1 1908994 R 557436 CDS YP_001272428.1 148545058 5189952 1910366..1912072 1 NC_009513.1 PFAM: Peptidoglycan-binding LysM; Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase 1912072 5189952 Lreu_1853 Lactobacillus reuteri DSM 20016 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase YP_001272428.1 1910366 D 557436 CDS YP_001272429.1 148545059 5190087 1912240..1912554 1 NC_009513.1 PFAM: regulatory protein, ArsR; ArsR family transcriptional regulator 1912554 5190087 Lreu_1854 Lactobacillus reuteri DSM 20016 ArsR family transcriptional regulator YP_001272429.1 1912240 D 557436 CDS YP_001272430.1 148545060 5190013 complement(1912659..1912895) 1 NC_009513.1 hypothetical protein 1912895 5190013 Lreu_1855 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272430.1 1912659 R 557436 CDS YP_001272431.1 148545061 5189964 complement(1912999..1914981) 1 NC_009513.1 PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; ABC transporter-like protien 1914981 5189964 Lreu_1856 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001272431.1 1912999 R 557436 CDS YP_001272432.1 148545062 5190035 complement(1915079..1915768) 1 NC_009513.1 PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protien 1915768 5190035 Lreu_1857 Lactobacillus reuteri DSM 20016 ABC transporter-like protien YP_001272432.1 1915079 R 557436 CDS YP_001272433.1 148545063 5190014 complement(1915786..1916844) 1 NC_009513.1 PFAM: protein of unknown function DUF214; hypothetical protein 1916844 5190014 Lreu_1858 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272433.1 1915786 R 557436 CDS YP_001272434.1 148545064 5189749 complement(1916855..1917394) 1 NC_009513.1 PFAM: regulatory protein, TetR; transcriptional regulator 1917394 5189749 Lreu_1859 Lactobacillus reuteri DSM 20016 transcriptional regulator YP_001272434.1 1916855 R 557436 CDS YP_001272435.1 148545065 5189738 complement(1917630..1918640) 1 NC_009513.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 1918640 5189738 Lreu_1860 Lactobacillus reuteri DSM 20016 alcohol dehydrogenase YP_001272435.1 1917630 R 557436 CDS YP_001272436.1 148545066 5189762 1919211..1920803 1 NC_009513.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; Mn2+/Fe2+ transporter 1920803 5189762 Lreu_1861 Lactobacillus reuteri DSM 20016 Mn2+/Fe2+ transporter YP_001272436.1 1919211 D 557436 CDS YP_001272437.1 148545067 5189783 1921069..1921746 1 NC_009513.1 hypothetical protein 1921746 5189783 Lreu_1862 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272437.1 1921069 D 557436 CDS YP_001272438.1 148545068 5189665 1922075..1923880 1 NC_009513.1 TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase, SAD; threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase 1923880 5189665 Lreu_1863 Lactobacillus reuteri DSM 20016 threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase YP_001272438.1 1922075 D 557436 CDS YP_001272439.1 148545069 5190121 complement(1925702..1926994) 1 NC_009513.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase 1926994 5190121 Lreu_1865 Lactobacillus reuteri DSM 20016 type I phosphodiesterase/nucleotide pyrophosphatase YP_001272439.1 1925702 R 557436 CDS YP_001272440.1 148545070 5189650 1927242..1928618 1 NC_009513.1 PFAM: Spore germination protein; amino acid permease-associated region; amino acid permease-associated protein 1928618 5189650 Lreu_1866 Lactobacillus reuteri DSM 20016 amino acid permease-associated protein YP_001272440.1 1927242 D 557436 CDS YP_001272441.1 148545071 5189363 complement(1928683..1929639) 1 NC_009513.1 TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal domain protein; Ketopantoate reductase ApbA/PanE, C-terminal domain protein; 2-dehydropantoate 2-reductase 1929639 5189363 Lreu_1867 Lactobacillus reuteri DSM 20016 2-dehydropantoate 2-reductase YP_001272441.1 1928683 R 557436 CDS YP_001272442.1 148545072 5190054 1930083..1930274 1 NC_009513.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 1930274 5190054 Lreu_1868 Lactobacillus reuteri DSM 20016 XRE family transcriptional regulator YP_001272442.1 1930083 D 557436 CDS YP_001272443.1 148545073 5189463 1930274..1930801 1 NC_009513.1 hypothetical protein 1930801 5189463 Lreu_1869 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272443.1 1930274 D 557436 CDS YP_001272444.1 148545074 5188956 1931197..1932333 1 NC_009513.1 PFAM: Methionine synthase, vitamin-B12 independent; methionine synthase, vitamin-B12 independent 1932333 5188956 Lreu_1870 Lactobacillus reuteri DSM 20016 methionine synthase, vitamin-B12 independent YP_001272444.1 1931197 D 557436 CDS YP_001272445.1 148545075 5188899 complement(1932386..1932631) 1 NC_009513.1 PFAM: cytochrome b5; cytochrome b5 1932631 5188899 Lreu_1871 Lactobacillus reuteri DSM 20016 cytochrome b5 YP_001272445.1 1932386 R 557436 CDS YP_001272446.1 148545076 5189640 complement(1932644..1932862) 1 NC_009513.1 PFAM: cytochrome b5; cytochrome b5 1932862 5189640 Lreu_1872 Lactobacillus reuteri DSM 20016 cytochrome b5 YP_001272446.1 1932644 R 557436 CDS YP_001272447.1 148545077 5189577 complement(1932997..1933230) 1 NC_009513.1 PFAM: cytochrome b5; cytochrome b5 1933230 5189577 Lreu_1873 Lactobacillus reuteri DSM 20016 cytochrome b5 YP_001272447.1 1932997 R 557436 CDS YP_001272448.1 148545078 5188942 complement(1933359..1933796) 1 NC_009513.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1933796 5188942 Lreu_1874 Lactobacillus reuteri DSM 20016 N-acetyltransferase GCN5 YP_001272448.1 1933359 R 557436 CDS YP_001272449.1 148545079 5190095 complement(1933975..1934631) 1 NC_009513.1 hypothetical protein 1934631 5190095 Lreu_1875 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272449.1 1933975 R 557436 CDS YP_001272450.1 148545080 5190078 complement(1934759..1935127) 1 NC_009513.1 PFAM: helix-turn-helix, HxlR type; HxlR family transcriptional regulator 1935127 5190078 Lreu_1876 Lactobacillus reuteri DSM 20016 HxlR family transcriptional regulator YP_001272450.1 1934759 R 557436 CDS YP_001272451.1 148545081 5189632 1935168..1935770 1 NC_009513.1 nitroreductase-like oxidoreductase 1935770 5189632 Lreu_1877 Lactobacillus reuteri DSM 20016 nitroreductase-like oxidoreductase YP_001272451.1 1935168 D 557436 CDS YP_001272452.1 148545082 5189520 1935835..1936287 1 NC_009513.1 PFAM: regulatory protein, ArsR; helix-turn-helix, HxlR type; HxlR family transcriptional regulator 1936287 5189520 Lreu_1878 Lactobacillus reuteri DSM 20016 HxlR family transcriptional regulator YP_001272452.1 1935835 D 557436 CDS YP_001272453.1 148545083 5189976 complement(1936280..1937593) 1 NC_009513.1 hypothetical protein 1937593 5189976 Lreu_1879 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272453.1 1936280 R 557436 CDS YP_001272454.1 148545084 5190114 complement(1937605..1938780) 1 NC_009513.1 PFAM: major facilitator superfamily MFS_1; major facilitator superfamily transporter 1938780 5190114 Lreu_1880 Lactobacillus reuteri DSM 20016 major facilitator superfamily transporter YP_001272454.1 1937605 R 557436 CDS YP_001272455.1 148545085 5189529 complement(1938930..1940252) 1 NC_009513.1 PFAM: peptidase C1B, bleomycin hydrolase; Bleomycin hydrolase 1940252 5189529 Lreu_1881 Lactobacillus reuteri DSM 20016 Bleomycin hydrolase YP_001272455.1 1938930 R 557436 CDS YP_001272456.1 148545086 5189452 1940460..1941101 1 NC_009513.1 PFAM: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1941101 5189452 Lreu_1882 Lactobacillus reuteri DSM 20016 NAD-dependent epimerase/dehydratase YP_001272456.1 1940460 D 557436 CDS YP_001272457.1 148545087 5189499 1941247..1943778 1 NC_009513.1 PFAM: Peptidase M1, membrane alanine aminopeptidase-like; peptidase M1, membrane alanine aminopeptidase-like protein 1943778 5189499 Lreu_1883 Lactobacillus reuteri DSM 20016 peptidase M1, membrane alanine aminopeptidase-like protein YP_001272457.1 1941247 D 557436 CDS YP_001272458.1 148545088 5189475 1944001..1944561 1 NC_009513.1 hypothetical protein 1944561 5189475 Lreu_1884 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272458.1 1944001 D 557436 CDS YP_001272459.1 148545089 5190139 1944940..1945950 1 NC_009513.1 catalyzes the formation of asparagine from aspartate and ammonia; asparagine synthetase AsnA 1945950 5190139 Lreu_1885 Lactobacillus reuteri DSM 20016 asparagine synthetase AsnA YP_001272459.1 1944940 D 557436 CDS YP_001272460.1 148545090 5189464 1945970..1947268 1 NC_009513.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 1947268 asnC 5189464 asnC Lactobacillus reuteri DSM 20016 asparaginyl-tRNA synthetase YP_001272460.1 1945970 D 557436 CDS YP_001272461.1 148545091 5190151 complement(1947462..1948142) 1 NC_009513.1 PFAM: EAL domain protein; diguanylate phosphodiesterase 1948142 5190151 Lreu_1887 Lactobacillus reuteri DSM 20016 diguanylate phosphodiesterase YP_001272461.1 1947462 R 557436 CDS YP_001272462.1 148545092 5190123 complement(1948158..1949267) 1 NC_009513.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase 1949267 5190123 Lreu_1888 Lactobacillus reuteri DSM 20016 diguanylate cyclase YP_001272462.1 1948158 R 557436 CDS YP_001272463.1 148545093 5188970 1949518..1950015 1 NC_009513.1 hypothetical protein 1950015 5188970 Lreu_1889 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272463.1 1949518 D 557436 CDS YP_001272464.1 148545094 5189131 1950005..1951336 1 NC_009513.1 PFAM: glycosyl transferase, family 2; glycosyl transferase family protein 1951336 5189131 Lreu_1890 Lactobacillus reuteri DSM 20016 glycosyl transferase family protein YP_001272464.1 1950005 D 557436 CDS YP_001272465.1 148545095 5188517 1951323..1952150 1 NC_009513.1 diguanylate phosphodiesterase 1952150 5188517 Lreu_1891 Lactobacillus reuteri DSM 20016 diguanylate phosphodiesterase YP_001272465.1 1951323 D 557436 CDS YP_001272466.1 148545096 5188442 complement(1952253..1952711) 1 NC_009513.1 PFAM: transposase IS200-family protein; transposase IS200-family protein 1952711 5188442 Lreu_1892 Lactobacillus reuteri DSM 20016 transposase IS200-family protein YP_001272466.1 1952253 R 557436 CDS YP_001272467.1 148545097 5188562 complement(1952965..1953636) 1 NC_009513.1 PFAM: glutamine amidotransferase class-I; glutamine amidotransferase 1953636 5188562 Lreu_1893 Lactobacillus reuteri DSM 20016 glutamine amidotransferase YP_001272467.1 1952965 R 557436 CDS YP_001272468.1 148545098 5188533 complement(1953738..1954100) 1 NC_009513.1 hypothetical protein 1954100 5188533 Lreu_1894 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272468.1 1953738 R 557436 CDS YP_001272469.1 148545099 5188571 complement(1954215..1954859) 1 NC_009513.1 NADH-flavin reductase-like protein 1954859 5188571 Lreu_1895 Lactobacillus reuteri DSM 20016 NADH-flavin reductase-like protein YP_001272469.1 1954215 R 557436 CDS YP_001272470.1 148545100 5188361 complement(1954859..1956001) 1 NC_009513.1 hypothetical protein 1956001 5188361 Lreu_1896 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272470.1 1954859 R 557436 CDS YP_001272471.1 148545101 5189050 1956093..1956671 1 NC_009513.1 PFAM: regulatory protein, TetR; TetR family transcriptional regulator 1956671 5189050 Lreu_1897 Lactobacillus reuteri DSM 20016 TetR family transcriptional regulator YP_001272471.1 1956093 D 557436 CDS YP_001272472.1 148545102 5188599 complement(1956772..1957650) 1 NC_009513.1 PFAM: aldo/keto reductase; 2,5-didehydrogluconate reductase 1957650 5188599 Lreu_1898 Lactobacillus reuteri DSM 20016 2,5-didehydrogluconate reductase YP_001272472.1 1956772 R 557436 CDS YP_001272473.1 148545103 5189087 1957773..1958645 1 NC_009513.1 PFAM: regulatory protein, LysR; LysR family transcriptional regulator 1958645 5189087 Lreu_1899 Lactobacillus reuteri DSM 20016 LysR family transcriptional regulator YP_001272473.1 1957773 D 557436 CDS YP_001272474.1 148545104 5189123 1958723..1959712 1 NC_009513.1 TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase/glutaminase; asparaginase 1959712 5189123 Lreu_1900 Lactobacillus reuteri DSM 20016 asparaginase YP_001272474.1 1958723 D 557436 CDS YP_001272475.1 148545105 5189800 complement(1959771..1960772) 1 NC_009513.1 PFAM: protein of unknown function DUF1002; hypothetical protein 1960772 5189800 Lreu_1901 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272475.1 1959771 R 557436 CDS YP_001272476.1 148545106 5189527 complement(1960930..1962123) 1 NC_009513.1 PFAM: aminotransferase, class I and II; aromatic amino acid aminotransferase/2-aminoadipate aminotransferase 1962123 5189527 Lreu_1902 Lactobacillus reuteri DSM 20016 aromatic amino acid aminotransferase/2-aminoadipate aminotransferase YP_001272476.1 1960930 R 557436 CDS YP_001272477.1 148545107 5189371 complement(1962169..1963119) 1 NC_009513.1 PFAM: Lactate/malate dehydrogenase; malate dehydrogenase (NAD) 1963119 5189371 Lreu_1903 Lactobacillus reuteri DSM 20016 malate dehydrogenase (NAD) YP_001272477.1 1962169 R 557436 CDS YP_001272478.1 148545108 5190118 complement(1963170..1963982) 1 NC_009513.1 PFAM: Hydratase/decarboxylase; hydratase/decarboxylase 1963982 5190118 Lreu_1904 Lactobacillus reuteri DSM 20016 hydratase/decarboxylase YP_001272478.1 1963170 R 557436 CDS YP_001272479.1 148545109 5189975 complement(1964518..1965231) 1 NC_009513.1 PFAM: hydrolase family protein; hydrolase family protein 1965231 5189975 Lreu_1905 Lactobacillus reuteri DSM 20016 hydrolase family protein YP_001272479.1 1964518 R 557436 CDS YP_001272480.1 148545110 5189889 complement(1965330..1965860) 1 NC_009513.1 PFAM: transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 1965860 5189889 Lreu_1906 Lactobacillus reuteri DSM 20016 hexapaptide repeat-containing transferase YP_001272480.1 1965330 R 557436 CDS YP_001272481.1 148545111 5189695 1965977..1966846 1 NC_009513.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; transcriptional regulator 1966846 5189695 Lreu_1907 Lactobacillus reuteri DSM 20016 transcriptional regulator YP_001272481.1 1965977 D 557436 CDS YP_001272482.1 148545112 5189802 complement(1966905..1967390) 1 NC_009513.1 hypothetical protein 1967390 5189802 Lreu_1908 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272482.1 1966905 R 557436 CDS YP_001272483.1 148545113 5189238 1967883..1968203 1 NC_009513.1 PFAM: Carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 1968203 5189238 Lreu_1910 Lactobacillus reuteri DSM 20016 carboxymuconolactone decarboxylase YP_001272483.1 1967883 D 557436 CDS YP_001272484.1 148545114 5188714 1968290..1969132 1 NC_009513.1 hypothetical protein 1969132 5188714 Lreu_1911 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272484.1 1968290 D 557436 CDS YP_001272485.1 148545115 5188868 1969147..1970307 1 NC_009513.1 PFAM: aminotransferase, class I and II; class I and II aminotransferase 1970307 5188868 Lreu_1912 Lactobacillus reuteri DSM 20016 class I and II aminotransferase YP_001272485.1 1969147 D 557436 CDS YP_001272486.1 148545116 5189398 1970965..1971894 1 NC_009513.1 PFAM: Auxin Efflux Carrier; auxin efflux carrier 1971894 5189398 Lreu_1914 Lactobacillus reuteri DSM 20016 auxin efflux carrier YP_001272486.1 1970965 D 557436 CDS YP_001272487.1 148545117 5189401 1971996..1972673 1 NC_009513.1 PFAM: bifunctional deaminase-reductase domain protein; deaminase-reductase domain-containing protein 1972673 5189401 Lreu_1915 Lactobacillus reuteri DSM 20016 deaminase-reductase domain-containing protein YP_001272487.1 1971996 D 557436 CDS YP_001272488.1 148545118 5190041 complement(1973501..1974469) 1 NC_009513.1 PFAM: Integrase, catalytic region; integrase catalytic subunit 1974469 5190041 Lreu_1916 Lactobacillus reuteri DSM 20016 integrase catalytic subunit YP_001272488.1 1973501 R 557436 CDS YP_001272489.1 148545119 5190049 1974992..1975159 1 NC_009513.1 hypothetical protein 1975159 5190049 Lreu_1918 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272489.1 1974992 D 557436 CDS YP_001272490.1 148545120 5190048 1975480..1975734 1 NC_009513.1 hypothetical protein 1975734 5190048 Lreu_1919 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272490.1 1975480 D 557436 CDS YP_001272491.1 148545121 5190156 1976673..1977167 1 NC_009513.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated domain-containing protein 1977167 5190156 Lreu_1922 Lactobacillus reuteri DSM 20016 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_001272491.1 1976673 D 557436 CDS YP_001272492.1 148545122 5188890 1977187..1977513 1 NC_009513.1 PFAM: Antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 1977513 5188890 Lreu_1923 Lactobacillus reuteri DSM 20016 antibiotic biosynthesis monooxygenase YP_001272492.1 1977187 D 557436 CDS YP_001272493.1 148545123 5190044 complement(1977587..1978609) 1 NC_009513.1 PFAM: beta-lactamase; beta-lactamase 1978609 5190044 Lreu_1924 Lactobacillus reuteri DSM 20016 beta-lactamase YP_001272493.1 1977587 R 557436 CDS YP_001272494.1 148545124 5190040 1978823..1979359 1 NC_009513.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 1979359 5190040 Lreu_1925 Lactobacillus reuteri DSM 20016 hypoxanthine phosphoribosyltransferase YP_001272494.1 1978823 D 557436 CDS YP_001272495.1 148545125 5190028 1979517..1980167 1 NC_009513.1 PFAM: MgtC/SapB transporter; MgtC/SapB transporter 1980167 5190028 Lreu_1926 Lactobacillus reuteri DSM 20016 MgtC/SapB transporter YP_001272495.1 1979517 D 557436 CDS YP_001272496.1 148545126 5189563 1980187..1980819 1 NC_009513.1 hypothetical protein 1980819 5189563 Lreu_1927 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272496.1 1980187 D 557436 CDS YP_001272497.1 148545127 5189375 complement(1981112..1981765) 1 NC_009513.1 hypothetical protein 1981765 5189375 Lreu_1928 Lactobacillus reuteri DSM 20016 hypothetical protein YP_001272497.1 1981112 R 557436 CDS YP_001272498.1 148545128 5190104 complement(1981839..1982162) 1 NC_009513.1 PFAM: branched-chain amino acid transport; branched-chain amino acid transporter 1982162 5190104 Lreu_1929 Lactobacillus reuteri DSM 20016 branched-chain amino acid transporter YP_001272498.1 1981839 R 557436 CDS YP_001272499.1 148545129 5189996 complement(1982149..1982841) 1 NC_009513.1 PFAM: AzlC family protein; AzlC family protein 1982841 5189996 Lreu_1930 Lactobacillus reuteri DSM 20016 AzlC family protein YP_001272499.1 1982149 R 557436 CDS YP_001272500.1 148545130 5188572 1982947..1984347 1 NC_009513.1 PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; GntR family transcriptional regulator 1984347 5188572 Lreu_1931 Lactobacillus reuteri DSM 20016 GntR family transcriptional regulator YP_001272500.1 1982947 D 557436 CDS YP_001272501.1 148545131 5188867 complement(1984431..1985999) 1 NC_009513.1 PFAM: amidohydrolase; Amidohydrolase 3; amidohydrolase 3 1985999 5188867 Lreu_1932 Lactobacillus reuteri DSM 20016 amidohydrolase 3 YP_001272501.1 1984431 R 557436 CDS YP_001272502.1 148545132 5190030 complement(1986147..1987010) 1 NC_009513.1 PFAM: aldo/keto reductase; aldo/keto reductase 1987010 5190030 Lreu_1933 Lactobacillus reuteri DSM 20016 aldo/keto reductase YP_001272502.1 1986147 R 557436 CDS YP_001272503.1 148545133 5189164 complement(1987152..1987649) 1 NC_009513.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1987649 5189164 Lreu_1934 Lactobacillus reuteri DSM 20016 N-acetyltransferase GCN5 YP_001272503.1 1987152 R 557436 CDS YP_001272504.1 148545134 5188983 complement(1987687..1988292) 1 NC_009513.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; signal peptidase I 1988292 5188983 Lreu_1935 Lactobacillus reuteri DSM 20016 signal peptidase I YP_001272504.1 1987687 R 557436 CDS YP_001272505.1 148545135 5190093 complement(1988605..1989849) 1 NC_009513.1 ATP-grasp protein-like protein 1989849 5190093 Lreu_1936 Lactobacillus reuteri DSM 20016 ATP-grasp protein-like protein YP_001272505.1 1988605 R 557436 CDS YP_001272506.1 148545136 5189445 complement(1989867..1991417) 1 NC_009513.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1991417 murE 5189445 murE Lactobacillus reuteri DSM 20016 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_001272506.1 1989867 R 557436 CDS YP_001272507.1 148545137 5189503 complement(1991559..1993478) 1 NC_009513.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; asparagine synthase 1993478 5189503 Lreu_1938 Lactobacillus reuteri DSM 20016 asparagine synthase YP_001272507.1 1991559 R 557436 CDS YP_001272508.1 148545138 5190106 complement(1993677..1995620) 1 NC_009513.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 1995620 gidA 5190106 gidA Lactobacillus reuteri DSM 20016 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_001272508.1 1993677 R 557436 CDS YP_001272509.1 148545139 5188893 complement(1995632..1997020) 1 NC_009513.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 1997020 trmE 5188893 trmE Lactobacillus reuteri DSM 20016 tRNA modification GTPase TrmE YP_001272509.1 1995632 R 557436 CDS YP_001272510.1 148545140 5188896 complement(1997177..1997944) 1 NC_009513.1 PFAM: single-stranded nucleic acid binding R3H domain protein; single-stranded nucleic acid binding R3H domain-containing protein 1997944 5188896 Lreu_1941 Lactobacillus reuteri DSM 20016 single-stranded nucleic acid binding R3H domain-containing protein YP_001272510.1 1997177 R 557436 CDS YP_001272511.1 148545141 5189545 complement(1998040..1998831) 1 NC_009513.1 PFAM: 60 kDa inner membrane insertion protein; 60 kDa inner membrane insertion protein 1998831 5189545 Lreu_1942 Lactobacillus reuteri DSM 20016 60 kDa inner membrane insertion protein YP_001272511.1 1998040 R 557436 CDS YP_001272512.1 148545142 5188578 complement(1998877..1999230) 1 NC_009513.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 1999230 rnpA 5188578 rnpA Lactobacillus reuteri DSM 20016 ribonuclease P YP_001272512.1 1998877 R 557436 CDS YP_001272513.1 148545143 5189758 complement(1999369..1999503) 1 NC_009513.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 1999503 rpmH 5189758 rpmH Lactobacillus reuteri DSM 20016 50S ribosomal protein L34 YP_001272513.1 1999369 R 557436 CDS