-- dump date 20140619_124939 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_394614.1 81427617 3778580 210..1556 1 NC_007576.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA 1556 dnaA 3778580 dnaA Lactobacillus sakei subsp. sakei 23K chromosome replication initiator DnaA YP_394614.1 210 D 314315 CDS YP_394615.1 81427618 3778581 1734..2873 1 NC_007576.1 DNA-directed DNA polymerase III subunit beta 2873 dnaN 3778581 dnaN Lactobacillus sakei subsp. sakei 23K DNA-directed DNA polymerase III subunit beta YP_394615.1 1734 D 314315 CDS YP_394616.1 81427619 3778582 3116..3343 1 NC_007576.1 hypothetical protein 3343 3778582 LSA0003 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394616.1 3116 D 314315 CDS YP_394617.1 81427620 3778583 3350..4477 1 NC_007576.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 4477 recF 3778583 recF Lactobacillus sakei subsp. sakei 23K recombination protein F YP_394617.1 3350 D 314315 CDS YP_394618.1 81427621 3778584 4514..6490 1 NC_007576.1 DNA gyrase subunit B 6490 gyrB 3778584 gyrB Lactobacillus sakei subsp. sakei 23K DNA gyrase subunit B YP_394618.1 4514 D 314315 CDS YP_394619.1 81427622 3778585 6538..9111 1 NC_007576.1 DNA gyrase subunit A 9111 gyrA 3778585 gyrA Lactobacillus sakei subsp. sakei 23K DNA gyrase subunit A YP_394619.1 6538 D 314315 CDS YP_394620.1 81427623 3778586 9348..9644 1 NC_007576.1 30S ribosomal protein S6 9644 rpsF 3778586 rpsF Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S6 YP_394620.1 9348 D 314315 CDS YP_394621.1 81427624 3778628 9683..10195 1 NC_007576.1 ssDNA-binding protein 10195 ssb 3778628 ssb Lactobacillus sakei subsp. sakei 23K ssDNA-binding protein YP_394621.1 9683 D 314315 CDS YP_394622.1 81427625 3778629 10226..10465 1 NC_007576.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 10465 rpsR 3778629 rpsR Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S18 YP_394622.1 10226 D 314315 CDS YP_394623.1 81427626 3778630 10683..12716 1 NC_007576.1 nucleotide-binding phosphoesterase 12716 3778630 LSA0010 Lactobacillus sakei subsp. sakei 23K nucleotide-binding phosphoesterase YP_394623.1 10683 D 314315 CDS YP_394624.1 81427627 3778631 12737..13189 1 NC_007576.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 13189 rplI 3778631 rplI Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L9 YP_394624.1 12737 D 314315 CDS YP_394625.1 81427628 3778632 13323..14717 1 NC_007576.1 replicative DNA helicase C 14717 dnaC 3778632 dnaC Lactobacillus sakei subsp. sakei 23K replicative DNA helicase C YP_394625.1 13323 D 314315 CDS YP_394626.1 81427629 3778633 complement(15068..16408) 1 NC_007576.1 nucleobase: cation symporter 16408 3778633 LSA0013 Lactobacillus sakei subsp. sakei 23K nucleobase: cation symporter YP_394626.1 15068 R 314315 CDS YP_394627.1 81427630 3778634 16777..17517 1 NC_007576.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 17517 gidB 3778634 gidB Lactobacillus sakei subsp. sakei 23K 16S rRNA methyltransferase GidB YP_394627.1 16777 D 314315 CDS YP_394628.1 81427631 3778635 17517..18416 1 NC_007576.1 chromosome partitioning protein, DNA-binding exonuclease 18416 parB1 3778635 parB1 Lactobacillus sakei subsp. sakei 23K chromosome partitioning protein, DNA-binding exonuclease YP_394628.1 17517 D 314315 CDS YP_394629.1 81427632 3778677 18428..19195 1 NC_007576.1 chromosome partitioning ATPase 19195 parA 3778677 parA Lactobacillus sakei subsp. sakei 23K chromosome partitioning ATPase YP_394629.1 18428 D 314315 CDS YP_394630.1 81427633 3778678 19185..20060 1 NC_007576.1 chromosome partitioning protein, DNA-binding exonuclease 20060 parB2 3778678 parB2 Lactobacillus sakei subsp. sakei 23K chromosome partitioning protein, DNA-binding exonuclease YP_394630.1 19185 D 314315 CDS YP_394631.1 81427634 3778679 20079..20327 1 NC_007576.1 hypothetical protein 20327 3778679 LSA0018 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394631.1 20079 D 314315 CDS YP_394632.1 81427635 3778680 20351..21451 1 NC_007576.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 21451 3778680 LSA0019 Lactobacillus sakei subsp. sakei 23K GTP-dependent nucleic acid-binding protein EngD YP_394632.1 20351 D 314315 CDS YP_394633.1 81427636 3778681 21469..22143 1 NC_007576.1 hypothetical protein 22143 3778681 LSA0020 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394633.1 21469 D 314315 CDS YP_394634.1 81427637 3778682 22180..22944 1 NC_007576.1 lipase/esterase 22944 3778682 LSA0021 Lactobacillus sakei subsp. sakei 23K lipase/esterase YP_394634.1 22180 D 314315 CDS YP_394635.1 81427638 3778683 23325..23993 1 NC_007576.1 haloacid dehalogenase 23993 3778683 LSA0022 Lactobacillus sakei subsp. sakei 23K haloacid dehalogenase YP_394635.1 23325 D 314315 CDS YP_394636.1 81427639 3778684 complement(23990..24457) 1 NC_007576.1 has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; flavoprotein NrdI 24457 3778684 LSA0023 Lactobacillus sakei subsp. sakei 23K flavoprotein NrdI YP_394636.1 23990 R 314315 CDS YP_394638.1 81427641 3778726 complement(25476..26102) 1 NC_007576.1 hypothetical protein 26102 3778726 LSA0025 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394638.1 25476 R 314315 CDS YP_394639.1 81427642 3778727 complement(26115..26558) 1 NC_007576.1 hypothetical protein 26558 3778727 LSA0026 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394639.1 26115 R 314315 CDS YP_394640.1 81427643 3778728 26675..27040 1 NC_007576.1 hypothetical protein 27040 3778728 LSA0027 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394640.1 26675 D 314315 CDS YP_394641.1 81427644 3778729 27150..28010 1 NC_007576.1 hypothetical protein 28010 3778729 LSA0028 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394641.1 27150 D 314315 CDS YP_394642.1 81427645 3778730 complement(28058..29401) 1 NC_007576.1 hemolysinC family Mg(2+)/Co(2+) transport protein 29401 3778730 LSA0029 Lactobacillus sakei subsp. sakei 23K hemolysinC family Mg(2+)/Co(2+) transport protein YP_394642.1 28058 R 314315 CDS YP_394643.1 81427646 3778731 complement(29633..30484) 1 NC_007576.1 aldo/keto reductase 30484 3778731 LSA0030 Lactobacillus sakei subsp. sakei 23K aldo/keto reductase YP_394643.1 29633 R 314315 CDS YP_394644.1 81427647 3778732 complement(30568..31800) 1 NC_007576.1 hypothetical protein 31800 3778732 LSA0031 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394644.1 30568 R 314315 CDS YP_394645.1 81427648 3778798 complement(31874..32239) 1 NC_007576.1 hypothetical protein 32239 3778798 LSA0032 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394645.1 31874 R 314315 CDS YP_394646.1 81427649 3778799 complement(32333..33472) 1 NC_007576.1 MFS family transporter 33472 3778799 LSA0033 Lactobacillus sakei subsp. sakei 23K MFS family transporter YP_394646.1 32333 R 314315 CDS YP_394647.1 81427650 3778800 complement(33536..34693) 1 NC_007576.1 (Fe-S)-binding protein 34693 3778800 LSA0035 Lactobacillus sakei subsp. sakei 23K (Fe-S)-binding protein YP_394647.1 33536 R 314315 CDS YP_394648.1 81427651 3778801 complement(34718..35506) 1 NC_007576.1 serine/tyrosine protein phosphatase 35506 3778801 LSA0036 Lactobacillus sakei subsp. sakei 23K serine/tyrosine protein phosphatase YP_394648.1 34718 R 314315 CDS YP_394649.1 81427652 3778802 35628..36572 1 NC_007576.1 ion Mg(2+)/Co(2+) transport protein 36572 3778802 LSA0037 Lactobacillus sakei subsp. sakei 23K ion Mg(2+)/Co(2+) transport protein YP_394649.1 35628 D 314315 CDS YP_394650.1 81427653 3778803 36678..37160 1 NC_007576.1 universal stress protein UspA family protein 37160 usp5 3778803 usp5 Lactobacillus sakei subsp. sakei 23K universal stress protein UspA family protein YP_394650.1 36678 D 314315 CDS YP_394651.1 81427654 3778804 37243..37788 1 NC_007576.1 3-methyladenine DNA glycosylase 37788 tag1 3778804 tag1 Lactobacillus sakei subsp. sakei 23K 3-methyladenine DNA glycosylase YP_394651.1 37243 D 314315 CDS YP_394652.1 81427655 3778805 37871..38365 1 NC_007576.1 hypothetical protein 38365 3778805 LSA0040 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394652.1 37871 D 314315 CDS YP_394653.1 81427656 3778546 38535..39473 1 NC_007576.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 39473 panE 3778546 panE Lactobacillus sakei subsp. sakei 23K 2-dehydropantoate 2-reductase YP_394653.1 38535 D 314315 CDS YP_394654.1 81427657 3778547 39487..39954 1 NC_007576.1 universal stress protein UspA family protein 39954 usp1 3778547 usp1 Lactobacillus sakei subsp. sakei 23K universal stress protein UspA family protein YP_394654.1 39487 D 314315 CDS YP_394655.1 81427658 3778548 40035..40763 1 NC_007576.1 hypothetical protein 40763 3778548 LSA0043 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394655.1 40035 D 314315 CDS YP_394656.1 81427659 3778549 40849..41064 1 NC_007576.1 hypothetical protein 41064 3778549 LSA0044 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394656.1 40849 D 314315 CDS YP_394657.1 81427660 3778550 complement(41152..42339) 1 NC_007576.1 cyclopropane-fatty-acyl-phospholipid synthase 42339 cfa 3778550 cfa Lactobacillus sakei subsp. sakei 23K cyclopropane-fatty-acyl-phospholipid synthase YP_394657.1 41152 R 314315 CDS YP_394658.1 81427661 3778551 42504..43517 1 NC_007576.1 transporter 43517 3778551 LSA0046 Lactobacillus sakei subsp. sakei 23K transporter YP_394658.1 42504 D 314315 CDS YP_394659.1 81427662 3778552 complement(43574..43819) 1 NC_007576.1 hypothetical protein 43819 3778552 LSA0047 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394659.1 43574 R 314315 CDS YP_394660.1 81427663 3778553 43989..44186 1 NC_007576.1 hypothetical protein 44186 3778553 LSA0048 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394660.1 43989 D 314315 CDS YP_394661.1 81427664 3778554 complement(44293..45345) 1 NC_007576.1 D-alanine--D-alanine ligase 45345 ddl 3778554 ddl Lactobacillus sakei subsp. sakei 23K D-alanine--D-alanine ligase YP_394661.1 44293 R 314315 CDS YP_394662.1 81427665 3778049 45540..45980 1 NC_007576.1 heat shock protein 20 45980 3778049 LSA0050 Lactobacillus sakei subsp. sakei 23K heat shock protein 20 YP_394662.1 45540 D 314315 CDS YP_394663.1 81427666 3778050 46103..46999 1 NC_007576.1 Na(+) ABC exporter, ATP-binding subunit 46999 3778050 LSA0051 Lactobacillus sakei subsp. sakei 23K Na(+) ABC exporter, ATP-binding subunit YP_394663.1 46103 D 314315 CDS YP_394664.1 81427667 3778051 46992..48236 1 NC_007576.1 Na(+) ABC exporter, membrane-spanning/permease subunit 48236 3778051 LSA0052 Lactobacillus sakei subsp. sakei 23K Na(+) ABC exporter, membrane-spanning/permease subunit YP_394664.1 46992 D 314315 CDS YP_394665.1 81427668 3778052 48377..50272 1 NC_007576.1 endopeptidase O 50272 pepO 3778052 pepO Lactobacillus sakei subsp. sakei 23K endopeptidase O YP_394665.1 48377 D 314315 CDS YP_394666.1 81427669 3778053 50525..51142 1 NC_007576.1 maltose O-acetyltransferase 51142 maa 3778053 maa Lactobacillus sakei subsp. sakei 23K maltose O-acetyltransferase YP_394666.1 50525 D 314315 CDS YP_394667.1 81427670 3778054 complement(51132..52298) 1 NC_007576.1 thiamine/thiamine :cation symporter 52298 3778054 LSA0055 Lactobacillus sakei subsp. sakei 23K thiamine/thiamine :cation symporter YP_394667.1 51132 R 314315 CDS YP_394668.1 81427671 3778055 complement(52288..52962) 1 NC_007576.1 thiamine-phosphate pyrophosphorylase 52962 thiE 3778055 thiE Lactobacillus sakei subsp. sakei 23K thiamine-phosphate pyrophosphorylase YP_394668.1 52288 R 314315 CDS YP_394669.1 81427672 3778056 complement(52955..53767) 1 NC_007576.1 phosphomethylpyrimidine kinase (HMP-phosphate kinase) 53767 thiD 3778056 thiD Lactobacillus sakei subsp. sakei 23K phosphomethylpyrimidine kinase (HMP-phosphate kinase) YP_394669.1 52955 R 314315 CDS YP_394670.1 81427673 3777296 complement(53760..54569) 1 NC_007576.1 catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase 54569 thiM 3777296 thiM Lactobacillus sakei subsp. sakei 23K hydroxyethylthiazole kinase YP_394670.1 53760 R 314315 CDS YP_394671.1 81427674 3777297 54975..56993 1 NC_007576.1 N-acetylglucosamine and glucose-specific phosphotransferase system, enzyme IIABC 56993 nagE 3777297 nagE Lactobacillus sakei subsp. sakei 23K N-acetylglucosamine and glucose-specific phosphotransferase system, enzyme IIABC YP_394671.1 54975 D 314315 CDS YP_394672.1 81427675 3777298 complement(57053..57997) 1 NC_007576.1 hypothetical protein 57997 3777298 LSA0061 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394672.1 57053 R 314315 CDS YP_394673.1 81427676 3777299 complement(58097..59245) 1 NC_007576.1 hypothetical protein 59245 3777299 LSA0062 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394673.1 58097 R 314315 CDS YP_394674.1 81427677 3777300 59513..60793 1 NC_007576.1 adenylosuccinate synthetase 60793 purA 3777300 purA Lactobacillus sakei subsp. sakei 23K adenylosuccinate synthetase YP_394674.1 59513 D 314315 CDS YP_394675.1 81427678 3777301 60964..62274 1 NC_007576.1 nucleobase:cation symporter 62274 3777301 LSA0064 Lactobacillus sakei subsp. sakei 23K nucleobase:cation symporter YP_394675.1 60964 D 314315 CDS YP_394676.1 81427679 3777302 62398..62856 1 NC_007576.1 hypothetical protein 62856 3777302 LSA0065 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394676.1 62398 D 314315 CDS YP_394677.1 81427680 3777303 62931..63593 1 NC_007576.1 surface protein transpeptidase 1 (sortase 1) 63593 srtA1 3777303 srtA1 Lactobacillus sakei subsp. sakei 23K surface protein transpeptidase 1 (sortase 1) YP_394677.1 62931 D 314315 CDS YP_394678.1 81427681 3777176 63798..64829 1 NC_007576.1 catalyzes the formation of putrescine from carbamoyl-putrescine during agmatine degradation; putrescine carbamoyltransferase 64829 3777176 LSA0067 Lactobacillus sakei subsp. sakei 23K putrescine carbamoyltransferase YP_394678.1 63798 D 314315 CDS YP_394679.1 81427682 3777177 64869..65849 1 NC_007576.1 amino acid/polyamine antiporter (N-terminal fragment), authentic frameshift 65849 3777177 LSA0068 Lactobacillus sakei subsp. sakei 23K amino acid/polyamine antiporter (N-terminal fragment), authentic frameshift YP_394679.1 64869 D 314315 CDS YP_394680.1 81427683 3777178 65735..66229 1 NC_007576.1 amino acid/polyamine antiporter (C-terminal fragment), authentic frameshift 66229 3777178 LSA0069 Lactobacillus sakei subsp. sakei 23K amino acid/polyamine antiporter (C-terminal fragment), authentic frameshift YP_394680.1 65735 D 314315 CDS YP_394681.2 228879518 3777179 66246..67343 1 NC_007576.1 catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis; agmatine deiminase 67343 3777179 LSA0070 Lactobacillus sakei subsp. sakei 23K agmatine deiminase YP_394681.2 66246 D 314315 CDS YP_394682.1 81427685 3777180 67359..68294 1 NC_007576.1 catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 68294 3777180 LSA0071 Lactobacillus sakei subsp. sakei 23K carbamate kinase YP_394682.1 67359 D 314315 CDS YP_394683.1 81427686 3777181 68379..69482 1 NC_007576.1 peptidylarginine deiminase (amidinotransferase) 69482 3777181 LSA0072 Lactobacillus sakei subsp. sakei 23K peptidylarginine deiminase (amidinotransferase) YP_394683.1 68379 D 314315 CDS YP_394684.1 81427687 3777182 69522..70268 1 NC_007576.1 RpiR family transcriptional regulator 70268 3777182 LSA0073 Lactobacillus sakei subsp. sakei 23K RpiR family transcriptional regulator YP_394684.1 69522 D 314315 CDS YP_394685.1 81427688 3777183 complement(70360..70929) 1 NC_007576.1 XRE family transcriptional regulator 70929 3777183 LSA0074 Lactobacillus sakei subsp. sakei 23K XRE family transcriptional regulator YP_394685.1 70360 R 314315 CDS YP_394687.1 81427689 3777341 71444..71998 1 NC_007576.1 DNA invertase (Plasmidic resolvase) 71998 3777341 LSA0076 Lactobacillus sakei subsp. sakei 23K DNA invertase (Plasmidic resolvase) YP_394687.1 71444 D 314315 CDS YP_394688.1 81427690 3777342 72438..73151 1 NC_007576.1 two-component system response regulator 73151 3777342 LSA0077 Lactobacillus sakei subsp. sakei 23K two-component system response regulator YP_394688.1 72438 D 314315 CDS YP_394689.1 81427691 3777343 73161..75059 1 NC_007576.1 two-component system sensor histidine kinase 75059 3777343 LSA0078 Lactobacillus sakei subsp. sakei 23K two-component system sensor histidine kinase YP_394689.1 73161 D 314315 CDS YP_394690.1 81427692 3777344 75049..76380 1 NC_007576.1 hypothetical protein 76380 3777344 LSA0079 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394690.1 75049 D 314315 CDS YP_394691.1 81427693 3777345 76385..77206 1 NC_007576.1 hypothetical protein 77206 3777345 LSA0080 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394691.1 76385 D 314315 CDS YP_394692.1 81427694 3777346 77241..78047 1 NC_007576.1 beta-lactamase hydrolase 78047 3777346 LSA0081 Lactobacillus sakei subsp. sakei 23K beta-lactamase hydrolase YP_394692.1 77241 D 314315 CDS YP_394693.1 81427695 3777347 78181..79404 1 NC_007576.1 serine protease HtrA 79404 htrA 3777347 htrA Lactobacillus sakei subsp. sakei 23K serine protease HtrA YP_394693.1 78181 D 314315 CDS YP_394695.1 81427697 3778041 79985..80464 1 NC_007576.1 SPOUT methyltransferase; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 80464 3778041 LSA0084 Lactobacillus sakei subsp. sakei 23K rRNA large subunit methyltransferase YP_394695.1 79985 D 314315 CDS YP_394696.1 81427698 3778042 80604..81251 1 NC_007576.1 lipoprotein precursor 81251 3778042 LSA0085 Lactobacillus sakei subsp. sakei 23K lipoprotein precursor YP_394696.1 80604 D 314315 CDS YP_394697.1 81427699 3778043 complement(81314..82333) 1 NC_007576.1 adenosine deaminase 82333 add 3778043 add Lactobacillus sakei subsp. sakei 23K adenosine deaminase YP_394697.1 81314 R 314315 CDS YP_394698.1 81427700 3778044 82503..83846 1 NC_007576.1 adenine/adenosine:cation symporter 83846 3778044 LSA0087 Lactobacillus sakei subsp. sakei 23K adenine/adenosine:cation symporter YP_394698.1 82503 D 314315 CDS YP_394699.1 81427701 3778045 83856..85640 1 NC_007576.1 adenine deaminase 85640 adeC1 3778045 adeC1 Lactobacillus sakei subsp. sakei 23K adenine deaminase YP_394699.1 83856 D 314315 CDS YP_394700.1 81427702 3778046 complement(86081..87007) 1 NC_007576.1 drug transport protein 87007 3778046 LSA0089 Lactobacillus sakei subsp. sakei 23K drug transport protein YP_394700.1 86081 R 314315 CDS YP_394701.1 81427703 3778047 87186..88481 1 NC_007576.1 extracellular arylsulfate sulfotransferase (N-terminal fragment), authentic frameshift 88481 3778047 LSA0090 Lactobacillus sakei subsp. sakei 23K extracellular arylsulfate sulfotransferase (N-terminal fragment), authentic frameshift YP_394701.1 87186 D 314315 CDS YP_394702.1 81427704 3778048 88481..88849 1 NC_007576.1 extracellular arylsulfate sulfotransferase (C-terminal fragment), authentic frameshift 88849 3778048 LSA0091 Lactobacillus sakei subsp. sakei 23K extracellular arylsulfate sulfotransferase (C-terminal fragment), authentic frameshift YP_394702.1 88481 D 314315 CDS YP_394703.1 81427705 3778275 88883..89425 1 NC_007576.1 hypothetical protein 89425 3778275 LSA0092 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394703.1 88883 D 314315 CDS YP_394704.1 81427706 3778276 89509..90345 1 NC_007576.1 hypothetical protein 90345 3778276 LSA0093 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394704.1 89509 D 314315 CDS YP_394705.1 81427707 3778277 complement(90563..91786) 1 NC_007576.1 MFS family transporter 91786 3778277 LSA0094 Lactobacillus sakei subsp. sakei 23K MFS family transporter YP_394705.1 90563 R 314315 CDS YP_394706.1 81427708 3778278 91981..93513 1 NC_007576.1 transporter 93513 3778278 LSA0095 Lactobacillus sakei subsp. sakei 23K transporter YP_394706.1 91981 D 314315 CDS YP_394707.1 81427709 3778279 complement(93789..94400) 1 NC_007576.1 Signal peptidase I (leader peptidase I) 94400 sipA1 3778279 sipA1 Lactobacillus sakei subsp. sakei 23K Signal peptidase I (leader peptidase I) YP_394707.1 93789 R 314315 CDS YP_394708.1 81427710 3778280 complement(94485..94628) 1 NC_007576.1 hypothetical protein 94628 3778280 LSA0097 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394708.1 94485 R 314315 CDS YP_394709.1 81427711 3778281 94813..96066 1 NC_007576.1 hypothetical protein 96066 3778281 LSA0098 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394709.1 94813 D 314315 CDS YP_394710.1 81427712 3778282 96063..96779 1 NC_007576.1 aspartate racemase 96779 racD 3778282 racD Lactobacillus sakei subsp. sakei 23K aspartate racemase YP_394710.1 96063 D 314315 CDS YP_394711.1 81427713 3778668 96789..97496 1 NC_007576.1 phosphoglycerate mutase 97496 gpm1 3778668 gpm1 Lactobacillus sakei subsp. sakei 23K phosphoglycerate mutase YP_394711.1 96789 D 314315 CDS YP_394712.1 81427714 3778669 97477..98628 1 NC_007576.1 penicillin-binding protein (Beta-lactamase class C) 98628 3778669 LSA0101 Lactobacillus sakei subsp. sakei 23K penicillin-binding protein (Beta-lactamase class C) YP_394712.1 97477 D 314315 CDS YP_394713.1 81427715 3778670 complement(98673..99269) 1 NC_007576.1 hypothetical protein 99269 3778670 LSA0102 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394713.1 98673 R 314315 CDS YP_394714.1 81427716 3778671 complement(99295..99777) 1 NC_007576.1 MarR family transcriptional regulator 99777 3778671 LSA0103 Lactobacillus sakei subsp. sakei 23K MarR family transcriptional regulator YP_394714.1 99295 R 314315 CDS YP_394715.1 81427717 3778672 complement(99949..100443) 1 NC_007576.1 thiol peroxidase 100443 tpx 3778672 tpx Lactobacillus sakei subsp. sakei 23K thiol peroxidase YP_394715.1 99949 R 314315 CDS YP_394716.1 81427718 3778673 100555..100758 1 NC_007576.1 hypothetical protein 100758 3778673 LSA0105 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394716.1 100555 D 314315 CDS YP_394717.1 81427719 3778674 100870..102144 1 NC_007576.1 cell surface protein 102144 3778674 LSA0106 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_394717.1 100870 D 314315 CDS YP_394718.1 81427720 3778675 102240..102800 1 NC_007576.1 guanylate kinase 102800 gmk1 3778675 gmk1 Lactobacillus sakei subsp. sakei 23K guanylate kinase YP_394718.1 102240 D 314315 CDS YP_394719.1 81427721 3778676 complement(102861..103049) 1 NC_007576.1 hypothetical protein 103049 3778676 LSA0108 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394719.1 102861 R 314315 CDS YP_394720.1 81427722 3777434 103339..103767 1 NC_007576.1 FUR family transcriptional regulator 103767 3777434 LSA0109 Lactobacillus sakei subsp. sakei 23K FUR family transcriptional regulator YP_394720.1 103339 D 314315 CDS YP_394721.1 81427723 3777435 103786..104262 1 NC_007576.1 cell surface protein 104262 3777435 LSA0110 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_394721.1 103786 D 314315 CDS YP_394722.1 81427724 3777436 104298..105116 1 NC_007576.1 hypothetical protein 105116 3777436 LSA0111 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394722.1 104298 D 314315 CDS YP_394723.1 81427725 3777437 105138..105614 1 NC_007576.1 hypothetical protein 105614 3777437 LSA0112 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394723.1 105138 D 314315 CDS YP_394724.1 81427726 3777438 105663..106592 1 NC_007576.1 hypothetical protein 106592 3777438 LSA0113 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394724.1 105663 D 314315 CDS YP_394725.1 81427727 3777439 106589..107347 1 NC_007576.1 cell surface protein 107347 3777439 LSA0114 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_394725.1 106589 D 314315 CDS YP_394726.1 81427728 3777440 107334..108104 1 NC_007576.1 cell surface protein 108104 3777440 LSA0115 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_394726.1 107334 D 314315 CDS YP_394727.1 81427729 3777441 108324..108575 1 NC_007576.1 hypothetical protein 108575 3777441 LSA0116 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394727.1 108324 D 314315 CDS YP_394728.1 81427730 3776924 108609..110810 1 NC_007576.1 hypothetical protein 110810 3776924 LSA0118 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394728.1 108609 D 314315 CDS YP_394729.1 81427731 3776925 110976..111416 1 NC_007576.1 hypothetical protein 111416 3776925 LSA0119 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394729.1 110976 D 314315 CDS YP_394730.1 81427732 3776926 complement(111469..112740) 1 NC_007576.1 GTP-binding protein 112740 3776926 LSA0120 Lactobacillus sakei subsp. sakei 23K GTP-binding protein YP_394730.1 111469 R 314315 CDS YP_394732.1 81427733 3776927 complement(113055..114224) 1 NC_007576.1 1,3-propanediol dehydrogenase 114224 dhaT 3776927 dhaT Lactobacillus sakei subsp. sakei 23K 1,3-propanediol dehydrogenase YP_394732.1 113055 R 314315 CDS YP_394733.1 81427734 3776928 114450..115337 1 NC_007576.1 ROK family sugar kinase 115337 3776928 LSA0123 Lactobacillus sakei subsp. sakei 23K ROK family sugar kinase YP_394733.1 114450 D 314315 CDS YP_394734.1 81427735 3776929 115396..116748 1 NC_007576.1 amino acid/polyamine transport protein 116748 3776929 LSA0125 Lactobacillus sakei subsp. sakei 23K amino acid/polyamine transport protein YP_394734.1 115396 D 314315 CDS YP_394735.1 81427736 3776930 complement(116800..118236) 1 NC_007576.1 amino-acid/polyamine transport protein 118236 3776930 LSA0126 Lactobacillus sakei subsp. sakei 23K amino-acid/polyamine transport protein YP_394735.1 116800 R 314315 CDS YP_394736.1 81427737 3776931 118452..119210 1 NC_007576.1 peptide ABC transporter ATP-binding protein 119210 3776931 LSA0127 Lactobacillus sakei subsp. sakei 23K peptide ABC transporter ATP-binding protein YP_394736.1 118452 D 314315 CDS YP_394737.1 81427738 3777264 119225..121045 1 NC_007576.1 peptide ABC transporter permease 121045 3777264 LSA0128 Lactobacillus sakei subsp. sakei 23K peptide ABC transporter permease YP_394737.1 119225 D 314315 CDS YP_394738.1 81427739 3777265 121228..122643 1 NC_007576.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 122643 uxaC 3777265 uxaC Lactobacillus sakei subsp. sakei 23K glucuronate isomerase YP_394738.1 121228 D 314315 CDS YP_394739.1 81427740 3777266 122755..123780 1 NC_007576.1 LacI family transcriptional regulator 123780 3777266 LSA0130 Lactobacillus sakei subsp. sakei 23K LacI family transcriptional regulator YP_394739.1 122755 D 314315 CDS YP_394740.1 81427741 3777267 complement(123831..124487) 1 NC_007576.1 phosphoglycerate mutase 124487 gpm2 3777267 gpm2 Lactobacillus sakei subsp. sakei 23K phosphoglycerate mutase YP_394740.1 123831 R 314315 CDS YP_394741.1 81427742 3777268 124702..125160 1 NC_007576.1 MarR family transcriptional regulator 125160 3777268 LSA0132 Lactobacillus sakei subsp. sakei 23K MarR family transcriptional regulator YP_394741.1 124702 D 314315 CDS YP_394742.1 81427743 3777269 complement(125526..126428) 1 NC_007576.1 prolyl aminopeptidase 126428 pepR 3777269 pepR Lactobacillus sakei subsp. sakei 23K prolyl aminopeptidase YP_394742.1 125526 R 314315 CDS YP_394743.1 81427744 3777270 complement(126502..128340) 1 NC_007576.1 Na(+)/H(+) antiporter 128340 3777270 LSA0134 Lactobacillus sakei subsp. sakei 23K Na(+)/H(+) antiporter YP_394743.1 126502 R 314315 CDS YP_394744.1 81427745 3777271 128477..128884 1 NC_007576.1 integral membrane protein, CcrB 128884 3777271 LSA0135 Lactobacillus sakei subsp. sakei 23K integral membrane protein, CcrB YP_394744.1 128477 D 314315 CDS YP_394745.1 81427746 3777575 128881..129228 1 NC_007576.1 integral membrane protein, CcrB 129228 3777575 LSA0136 Lactobacillus sakei subsp. sakei 23K integral membrane protein, CcrB YP_394745.1 128881 D 314315 CDS YP_394746.1 81427747 3777576 129322..131613 1 NC_007576.1 DNA helicase superfamily protein I 131613 3777576 LSA0137 Lactobacillus sakei subsp. sakei 23K DNA helicase superfamily protein I YP_394746.1 129322 D 314315 CDS YP_394747.1 81427748 3777577 131721..132650 1 NC_007576.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 132650 panK 3777577 panK Lactobacillus sakei subsp. sakei 23K pantothenate kinase YP_394747.1 131721 D 314315 CDS YP_394748.1 81427749 3777578 132817..134370 1 NC_007576.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 134370 guaA 3777578 guaA Lactobacillus sakei subsp. sakei 23K GMP synthase YP_394748.1 132817 D 314315 CDS YP_394749.1 81427750 3777579 134511..135878 1 NC_007576.1 hypothetical protein 135878 3777579 LSA0140 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394749.1 134511 D 314315 CDS YP_394750.1 81427751 3777580 complement(135980..136900) 1 NC_007576.1 IS30 family transposase 136900 tnpA1-ISLsa1 3777580 tnpA1-ISLsa1 Lactobacillus sakei subsp. sakei 23K IS30 family transposase YP_394750.1 135980 R 314315 CDS YP_394751.1 81427752 3777581 complement(137128..138399) 1 NC_007576.1 hypothetical protein 138399 3777581 LSA0142 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394751.1 137128 R 314315 CDS YP_394752.1 81427753 3777582 complement(138418..139281) 1 NC_007576.1 adenine-specific DNA methyltransferase 139281 3777582 LSA0143 Lactobacillus sakei subsp. sakei 23K adenine-specific DNA methyltransferase YP_394752.1 138418 R 314315 CDS YP_394753.1 81427754 3777919 complement(139565..140362) 1 NC_007576.1 IS3 family transposase 140362 tnpB1-IS1520 3777919 tnpB1-IS1520 Lactobacillus sakei subsp. sakei 23K IS3 family transposase YP_394753.1 139565 R 314315 CDS YP_394754.1 81427755 3777920 complement(140383..140634) 1 NC_007576.1 IS3 family transposase 140634 tnpA1-IS1520 3777920 tnpA1-IS1520 Lactobacillus sakei subsp. sakei 23K IS3 family transposase YP_394754.1 140383 R 314315 CDS YP_394755.1 81427756 3777921 140791..141576 1 NC_007576.1 adenine-specific methyltransferase 141576 3777921 LSA0146 Lactobacillus sakei subsp. sakei 23K adenine-specific methyltransferase YP_394755.1 140791 D 314315 CDS YP_394756.1 81427757 3777922 142108..143862 1 NC_007576.1 DNA-repair helicase 143862 3777922 LSA0147 Lactobacillus sakei subsp. sakei 23K DNA-repair helicase YP_394756.1 142108 D 314315 CDS YP_394757.1 81427758 3777923 144009..146051 1 NC_007576.1 DNA-repair ATPase 146051 3777923 LSA0148 Lactobacillus sakei subsp. sakei 23K DNA-repair ATPase YP_394757.1 144009 D 314315 CDS YP_394758.1 81427759 3777924 146044..146589 1 NC_007576.1 hypothetical protein 146589 3777924 LSA0149 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394758.1 146044 D 314315 CDS YP_394759.1 81427760 3777925 146840..147691 1 NC_007576.1 deacetylase (acetyl esterase) 147691 3777925 LSA0150 Lactobacillus sakei subsp. sakei 23K deacetylase (acetyl esterase) YP_394759.1 146840 D 314315 CDS YP_394760.1 81427761 3777926 147688..148206 1 NC_007576.1 hypothetical protein 148206 3777926 LSA0151 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394760.1 147688 D 314315 CDS YP_394761.1 81427762 3777902 complement(148432..149178) 1 NC_007576.1 hypothetical protein 149178 3777902 LSA0152 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394761.1 148432 R 314315 CDS YP_394762.1 81427763 3777903 complement(149220..149543) 1 NC_007576.1 hypothetical protein 149543 3777903 LSA0153 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394762.1 149220 R 314315 CDS YP_394763.1 81427764 3777904 complement(149540..149746) 1 NC_007576.1 XRE family transcriptional regulator 149746 3777904 LSA0154 Lactobacillus sakei subsp. sakei 23K XRE family transcriptional regulator YP_394763.1 149540 R 314315 CDS YP_394764.1 81427765 3777905 149914..150567 1 NC_007576.1 haloacid dehalogenase 150567 3777905 LSA0155 Lactobacillus sakei subsp. sakei 23K haloacid dehalogenase YP_394764.1 149914 D 314315 CDS YP_394765.1 81427766 3777906 complement(150620..151915) 1 NC_007576.1 hypothetical protein 151915 3777906 LSA0156 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394765.1 150620 R 314315 CDS YP_394766.1 81427767 3777907 complement(151939..153264) 1 NC_007576.1 hydroxyl/aromatic amino acid symporter 153264 3777907 LSA0157 Lactobacillus sakei subsp. sakei 23K hydroxyl/aromatic amino acid symporter YP_394766.1 151939 R 314315 CDS YP_394767.1 81427768 3777908 complement(153311..153400) 1 NC_007576.1 hypothetical protein 153400 3777908 LSA0158 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394767.1 153311 R 314315 CDS YP_394768.1 81427769 3777909 153561..154238 1 NC_007576.1 hypothetical protein 154238 3777909 LSA0159 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394768.1 153561 D 314315 CDS YP_394769.1 81427770 3777120 complement(154294..155211) 1 NC_007576.1 hypothetical protein 155211 3777120 LSA0160 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394769.1 154294 R 314315 CDS YP_394770.1 81427771 3777121 complement(155224..155556) 1 NC_007576.1 ArsR family transcriptional regulator 155556 3777121 LSA0161 Lactobacillus sakei subsp. sakei 23K ArsR family transcriptional regulator YP_394770.1 155224 R 314315 CDS YP_394771.1 81427772 3777122 complement(155691..157391) 1 NC_007576.1 bifunctional glycolsyltransferase/transpeptidase penicillin binding protein 157391 3777122 LSA0162 Lactobacillus sakei subsp. sakei 23K bifunctional glycolsyltransferase/transpeptidase penicillin binding protein YP_394771.1 155691 R 314315 CDS YP_394772.1 81427773 3777123 157562..157816 1 NC_007576.1 hypothetical protein 157816 3777123 LSA0163 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394772.1 157562 D 314315 CDS YP_394773.1 81427774 3777124 157869..158657 1 NC_007576.1 serine/tyrosine protein phosphatase 158657 3777124 LSA0164 Lactobacillus sakei subsp. sakei 23K serine/tyrosine protein phosphatase YP_394773.1 157869 D 314315 CDS YP_394774.1 81427775 3777125 158677..159567 1 NC_007576.1 oxidoreductase 159567 3777125 LSA0165 Lactobacillus sakei subsp. sakei 23K oxidoreductase YP_394774.1 158677 D 314315 CDS YP_394775.1 81427776 3777126 159710..159961 1 NC_007576.1 hypothetical protein 159961 3777126 LSA0166 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394775.1 159710 D 314315 CDS YP_394776.1 81427777 3777127 159980..160537 1 NC_007576.1 hypothetical protein 160537 3777127 LSA0167 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394776.1 159980 D 314315 CDS YP_394777.1 81427778 3777128 160548..160742 1 NC_007576.1 hypothetical protein 160742 3777128 LSA0168 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394777.1 160548 D 314315 CDS YP_394778.1 81427779 3777870 160758..161186 1 NC_007576.1 general stress protein 161186 3777870 LSA0169 Lactobacillus sakei subsp. sakei 23K general stress protein YP_394778.1 160758 D 314315 CDS YP_394779.1 81427780 3777871 161213..161674 1 NC_007576.1 general stress protein 161674 3777871 LSA0170 Lactobacillus sakei subsp. sakei 23K general stress protein YP_394779.1 161213 D 314315 CDS YP_394780.1 81427781 3777872 complement(161722..163161) 1 NC_007576.1 catalase 163161 katA 3777872 katA Lactobacillus sakei subsp. sakei 23K catalase YP_394780.1 161722 R 314315 CDS YP_394781.1 81427782 3777873 163840..167751 1 NC_007576.1 cell surface protein 167751 3777873 LSA0172 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_394781.1 163840 D 314315 CDS YP_394782.1 81427783 3777874 167771..168550 1 NC_007576.1 cell surface protein 168550 3777874 LSA0173 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_394782.1 167771 D 314315 CDS YP_394783.1 81427784 3777875 168544..168816 1 NC_007576.1 hypothetical protein 168816 3777875 LSA0174 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394783.1 168544 D 314315 CDS YP_394784.1 81427785 3777876 168813..169841 1 NC_007576.1 cell surface protein 169841 3777876 LSA0175 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_394784.1 168813 D 314315 CDS YP_394785.1 81427786 3777877 169813..169989 1 NC_007576.1 hypothetical protein 169989 3777877 LSA0176 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394785.1 169813 D 314315 CDS YP_394786.1 81427787 3777854 170162..171046 1 NC_007576.1 cell surface protein 171046 3777854 LSA0177 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_394786.1 170162 D 314315 CDS YP_394787.1 81427788 3777855 171157..171573 1 NC_007576.1 MarR family transcriptional regulator 171573 3777855 LSA0178 Lactobacillus sakei subsp. sakei 23K MarR family transcriptional regulator YP_394787.1 171157 D 314315 CDS YP_394788.1 81427789 3777856 complement(171633..173039) 1 NC_007576.1 peptidase U34 173039 pepD1 3777856 pepD1 Lactobacillus sakei subsp. sakei 23K peptidase U34 YP_394788.1 171633 R 314315 CDS YP_394789.1 81427790 3777857 173256..173996 1 NC_007576.1 manganese ABC transporter ATP-binding protein 173996 mtsC 3777857 mtsC Lactobacillus sakei subsp. sakei 23K manganese ABC transporter ATP-binding protein YP_394789.1 173256 D 314315 CDS YP_394790.1 81427791 3777858 173993..174853 1 NC_007576.1 manganese ABC transporter, membrane-spanning subunit 174853 mtsB 3777858 mtsB Lactobacillus sakei subsp. sakei 23K manganese ABC transporter, membrane-spanning subunit YP_394790.1 173993 D 314315 CDS YP_394791.1 81427792 3777859 174850..175794 1 NC_007576.1 manganese ABC transporter substrate-binding lipoprotein 175794 mtsA 3777859 mtsA Lactobacillus sakei subsp. sakei 23K manganese ABC transporter substrate-binding lipoprotein YP_394791.1 174850 D 314315 CDS YP_394792.1 81427793 3777860 175881..176387 1 NC_007576.1 isochorismatase/nicotamidase hydrolase 176387 3777860 LSA0183 Lactobacillus sakei subsp. sakei 23K isochorismatase/nicotamidase hydrolase YP_394792.1 175881 D 314315 CDS YP_394793.1 81427794 3777861 176596..176835 1 NC_007576.1 hypothetical protein 176835 3777861 LSA0184 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394793.1 176596 D 314315 CDS YP_394794.1 81427795 3777805 176864..178279 1 NC_007576.1 galactose:cation symporter 178279 galP 3777805 galP Lactobacillus sakei subsp. sakei 23K galactose:cation symporter YP_394794.1 176864 D 314315 CDS YP_394795.1 81427796 3777806 178687..179700 1 NC_007576.1 LytR family transcriptional regulator 179700 3777806 LSA0186 Lactobacillus sakei subsp. sakei 23K LytR family transcriptional regulator YP_394795.1 178687 D 314315 CDS YP_394796.1 81427797 3777807 complement(179705..181216) 1 NC_007576.1 drug-resistance ABC transporter, two ATP-binding subunits 181216 3777807 LSA0187 Lactobacillus sakei subsp. sakei 23K drug-resistance ABC transporter, two ATP-binding subunits YP_394796.1 179705 R 314315 CDS YP_394798.1 81427799 3777809 181932..183323 1 NC_007576.1 amino acid/polyamine transport protein 183323 3777809 LSA0189 Lactobacillus sakei subsp. sakei 23K amino acid/polyamine transport protein YP_394798.1 181932 D 314315 CDS YP_394799.1 81427800 3777810 183391..184479 1 NC_007576.1 hypothetical protein 184479 3777810 LSA0190 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394799.1 183391 D 314315 CDS YP_394800.1 81427801 3777811 184479..185222 1 NC_007576.1 hypothetical protein 185222 3777811 LSA0191 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394800.1 184479 D 314315 CDS YP_394801.1 81427802 3777812 185293..185421 1 NC_007576.1 hypothetical protein 185421 3777812 LSA0192 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394801.1 185293 D 314315 CDS YP_394802.1 81427803 3777617 185609..186169 1 NC_007576.1 hypothetical protein 186169 3777617 LSA0193 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394802.1 185609 D 314315 CDS YP_394803.1 81427804 3777618 complement(186239..187585) 1 NC_007576.1 cell surface protein 187585 3777618 LSA0194 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_394803.1 186239 R 314315 CDS YP_394804.1 81427805 3777619 complement(187871..188863) 1 NC_007576.1 lipoprotein precursor 188863 3777619 LSA0195 Lactobacillus sakei subsp. sakei 23K lipoprotein precursor YP_394804.1 187871 R 314315 CDS YP_394805.1 81427806 3777620 189082..190500 1 NC_007576.1 peptidase U34 190500 pepD2 3777620 pepD2 Lactobacillus sakei subsp. sakei 23K peptidase U34 YP_394805.1 189082 D 314315 CDS YP_394806.1 81427807 3777621 190786..191328 1 NC_007576.1 MarR family transcriptional regulator 191328 3777621 LSA0197 Lactobacillus sakei subsp. sakei 23K MarR family transcriptional regulator YP_394806.1 190786 D 314315 CDS YP_394807.1 81427808 3777622 191473..192657 1 NC_007576.1 acetate kinase 192657 ack1 3777622 ack1 Lactobacillus sakei subsp. sakei 23K acetate kinase YP_394807.1 191473 D 314315 CDS YP_394808.1 81427809 3777623 192672..192917 1 NC_007576.1 hypothetical protein 192917 3777623 LSA0199 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394808.1 192672 D 314315 CDS YP_394809.1 81427810 3777624 193092..193976 1 NC_007576.1 ribose transporter 193976 rbsU 3777624 rbsU Lactobacillus sakei subsp. sakei 23K ribose transporter YP_394809.1 193092 D 314315 CDS YP_394810.1 81427811 3777609 193997..194392 1 NC_007576.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 194392 rbsD 3777609 rbsD Lactobacillus sakei subsp. sakei 23K D-ribose pyranase YP_394810.1 193997 D 314315 CDS YP_394811.1 81427812 3777610 194412..195320 1 NC_007576.1 ribokinase 195320 rbsK 3777610 rbsK Lactobacillus sakei subsp. sakei 23K ribokinase YP_394811.1 194412 D 314315 CDS YP_394812.1 81427813 3777611 195385..196407 1 NC_007576.1 ribose operon transcriptional regulator 196407 rbsR 3777611 rbsR Lactobacillus sakei subsp. sakei 23K ribose operon transcriptional regulator YP_394812.1 195385 D 314315 CDS YP_394813.1 81427814 3777612 196551..197105 1 NC_007576.1 PadR family transcriptional regulator 197105 3777612 LSA0204 Lactobacillus sakei subsp. sakei 23K PadR family transcriptional regulator YP_394813.1 196551 D 314315 CDS YP_394814.1 81427815 3777613 197102..198661 1 NC_007576.1 drug:H(+) antiporter 198661 3777613 LSA0205 Lactobacillus sakei subsp. sakei 23K drug:H(+) antiporter YP_394814.1 197102 D 314315 CDS YP_394815.1 81427816 3777614 198757..199446 1 NC_007576.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 199446 gpmA 3777614 gpmA Lactobacillus sakei subsp. sakei 23K phosphoglyceromutase YP_394815.1 198757 D 314315 CDS YP_394816.1 81427817 3777615 199842..201965 1 NC_007576.1 ATPase/chaperone ClpL, specificity factor for ClpP protease 201965 clpL 3777615 clpL Lactobacillus sakei subsp. sakei 23K ATPase/chaperone ClpL, specificity factor for ClpP protease YP_394816.1 199842 D 314315 CDS YP_394817.1 81427818 3777616 202006..202542 1 NC_007576.1 hypothetical protein 202542 3777616 LSA0208 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394817.1 202006 D 314315 CDS YP_394818.1 81427819 3777592 complement(202614..203231) 1 NC_007576.1 hypothetical protein 203231 3777592 LSA0209 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394818.1 202614 R 314315 CDS YP_394819.1 81427820 3777593 203428..204420 1 NC_007576.1 choloylglycine hydrolase 204420 3777593 LSA0210 Lactobacillus sakei subsp. sakei 23K choloylglycine hydrolase YP_394819.1 203428 D 314315 CDS YP_394820.1 81427821 3777594 204683..205147 1 NC_007576.1 cell surface protein 205147 3777594 LSA0211 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_394820.1 204683 D 314315 CDS YP_394821.1 81427822 3777595 204946..208080 1 NC_007576.1 cell surface protein 208080 3777595 LSA0212 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_394821.1 204946 D 314315 CDS YP_394822.1 81427823 3777596 208154..209191 1 NC_007576.1 cell surface protein 209191 3777596 LSA0213 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_394822.1 208154 D 314315 CDS YP_394823.1 81427824 3777597 209194..209346 1 NC_007576.1 hypothetical protein 209346 3777597 LSA0214 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394823.1 209194 D 314315 CDS YP_394824.1 81427825 3777598 209408..210391 1 NC_007576.1 cell surface protein 210391 3777598 LSA0215 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_394824.1 209408 D 314315 CDS YP_394825.1 81427826 3777599 210685..211605 1 NC_007576.1 IS30 family transposase 211605 tnpA2-ISLsa1 3777599 tnpA2-ISLsa1 Lactobacillus sakei subsp. sakei 23K IS30 family transposase YP_394825.1 210685 D 314315 CDS YP_394826.1 81427827 3777583 211637..211906 1 NC_007576.1 MarR family transcriptional regulator 211906 3777583 LSA0216_b Lactobacillus sakei subsp. sakei 23K MarR family transcriptional regulator YP_394826.1 211637 D 314315 CDS YP_394827.1 81427828 3777584 212040..212696 1 NC_007576.1 thiosulfate sulfurtransferase 212696 3777584 LSA0217 Lactobacillus sakei subsp. sakei 23K thiosulfate sulfurtransferase YP_394827.1 212040 D 314315 CDS YP_394828.1 81427829 3777585 212784..213101 1 NC_007576.1 thioredoxin 213101 trxA1 3777585 trxA1 Lactobacillus sakei subsp. sakei 23K thioredoxin YP_394828.1 212784 D 314315 CDS YP_394829.1 81427830 3777586 213407..213964 1 NC_007576.1 XRE family transcriptional regulator 213964 3777586 LSA0219_a Lactobacillus sakei subsp. sakei 23K XRE family transcriptional regulator YP_394829.1 213407 D 314315 CDS YP_394830.1 81427831 3777587 214242..215201 1 NC_007576.1 cyanate transport protein 215201 3777587 LSA0219_b Lactobacillus sakei subsp. sakei 23K cyanate transport protein YP_394830.1 214242 D 314315 CDS YP_394831.1 81427832 3777588 215918..216169 1 NC_007576.1 IS3 family transposase 216169 tnpA2-IS1520 3777588 tnpA2-IS1520 Lactobacillus sakei subsp. sakei 23K IS3 family transposase YP_394831.1 215918 D 314315 CDS YP_394832.1 81427833 3777589 216190..216987 1 NC_007576.1 IS3 family transposase 216987 tnpB2-IS1520 3777589 tnpB2-IS1520 Lactobacillus sakei subsp. sakei 23K IS3 family transposase YP_394832.1 216190 D 314315 CDS YP_394833.1 81427834 3777590 complement(217034..218332) 1 NC_007576.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 218332 dapE 3777590 dapE Lactobacillus sakei subsp. sakei 23K succinyl-diaminopimelate desuccinylase YP_394833.1 217034 R 314315 CDS YP_394834.1 81427835 3777591 complement(218448..218780) 1 NC_007576.1 LysR family transcriptional regulator 218780 3777591 LSA0221 Lactobacillus sakei subsp. sakei 23K LysR family transcriptional regulator YP_394834.1 218448 R 314315 CDS YP_394835.1 81427836 3777567 complement(218880..219335) 1 NC_007576.1 LysR family transcriptional regulator 219335 3777567 LSA0223 Lactobacillus sakei subsp. sakei 23K LysR family transcriptional regulator YP_394835.1 218880 R 314315 CDS YP_394836.1 81427837 3777568 219458..220033 1 NC_007576.1 isoleucine patch superfamily acetyltransferase 220033 3777568 LSA0224 Lactobacillus sakei subsp. sakei 23K isoleucine patch superfamily acetyltransferase YP_394836.1 219458 D 314315 CDS YP_394837.1 81427838 3777569 220035..220781 1 NC_007576.1 oxidoreductase 220781 3777569 LSA0225 Lactobacillus sakei subsp. sakei 23K oxidoreductase YP_394837.1 220035 D 314315 CDS YP_394838.1 81427839 3777570 221085..223616 1 NC_007576.1 aminopeptidase 223616 pepN 3777570 pepN Lactobacillus sakei subsp. sakei 23K aminopeptidase YP_394838.1 221085 D 314315 CDS YP_394839.1 81427840 3777571 223777..225120 1 NC_007576.1 drug:H(+) antiporter 225120 3777571 LSA0227 Lactobacillus sakei subsp. sakei 23K drug:H(+) antiporter YP_394839.1 223777 D 314315 CDS YP_394840.1 81427841 3777572 225117..225716 1 NC_007576.1 hypothetical protein 225716 3777572 LSA0228 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394840.1 225117 D 314315 CDS YP_394841.1 81427842 3777573 225731..225880 1 NC_007576.1 MerR family transcriptional regulator 225880 3777573 LSA0229 Lactobacillus sakei subsp. sakei 23K MerR family transcriptional regulator YP_394841.1 225731 D 314315 CDS YP_394842.1 81427843 3777574 225886..226131 1 NC_007576.1 MerR family transcriptional regulator 226131 3777574 LSA0230 Lactobacillus sakei subsp. sakei 23K MerR family transcriptional regulator YP_394842.1 225886 D 314315 CDS YP_394843.1 81427844 3777410 226281..226814 1 NC_007576.1 MarR family transcriptional regulator 226814 3777410 LSA0231 Lactobacillus sakei subsp. sakei 23K MarR family transcriptional regulator YP_394843.1 226281 D 314315 CDS YP_394844.1 81427845 3777411 226827..228578 1 NC_007576.1 multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunits 228578 lmrA 3777411 lmrA Lactobacillus sakei subsp. sakei 23K multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunits YP_394844.1 226827 D 314315 CDS YP_394845.1 81427846 3777412 228861..229244 1 NC_007576.1 Na(+):H(+) antiporter (N-terminal fragment), authentic frameshift 229244 3777412 LSA0233 Lactobacillus sakei subsp. sakei 23K Na(+):H(+) antiporter (N-terminal fragment), authentic frameshift YP_394845.1 228861 D 314315 CDS YP_394846.1 81427847 3777413 229241..230914 1 NC_007576.1 Na(+):H(+) antiporter (C-terminal fragment), authentic frameshift 230914 3777413 LSA0234 Lactobacillus sakei subsp. sakei 23K Na(+):H(+) antiporter (C-terminal fragment), authentic frameshift YP_394846.1 229241 D 314315 CDS YP_394847.1 81427848 3777414 complement(230973..232667) 1 NC_007576.1 in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; hypothetical protein 232667 3777414 LSA0235 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394847.1 230973 R 314315 CDS YP_394848.1 81427849 3777415 complement(232708..232836) 1 NC_007576.1 hypothetical protein 232836 3777415 LSA0236 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394848.1 232708 R 314315 CDS YP_394849.1 81427850 3777416 233156..233911 1 NC_007576.1 XRE family transcriptional regulator 233911 3777416 LSA0237 Lactobacillus sakei subsp. sakei 23K XRE family transcriptional regulator YP_394849.1 233156 D 314315 CDS YP_394850.1 81427851 3777417 234003..234863 1 NC_007576.1 aldo/keto reductase 234863 3777417 LSA0238 Lactobacillus sakei subsp. sakei 23K aldo/keto reductase YP_394850.1 234003 D 314315 CDS YP_394851.1 81427852 3777378 234885..235310 1 NC_007576.1 MerR family transcriptional regulator 235310 3777378 LSA0239 Lactobacillus sakei subsp. sakei 23K MerR family transcriptional regulator YP_394851.1 234885 D 314315 CDS YP_394852.1 81427853 3777379 complement(235365..235883) 1 NC_007576.1 GNAT family acetyltransferase 235883 3777379 LSA0240 Lactobacillus sakei subsp. sakei 23K GNAT family acetyltransferase YP_394852.1 235365 R 314315 CDS YP_394853.1 81427854 3777380 complement(235903..236355) 1 NC_007576.1 MarR family transcriptional regulator 236355 3777380 LSA0241 Lactobacillus sakei subsp. sakei 23K MarR family transcriptional regulator YP_394853.1 235903 R 314315 CDS YP_394854.1 81427855 3777381 236661..237815 1 NC_007576.1 hypothetical protein 237815 3777381 LSA0242 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394854.1 236661 D 314315 CDS YP_394855.1 81427856 3777382 238004..239818 1 NC_007576.1 glycerophosphodiester phosphodiesterase 239818 3777382 LSA0243 Lactobacillus sakei subsp. sakei 23K glycerophosphodiester phosphodiesterase YP_394855.1 238004 D 314315 CDS YP_394856.1 81427857 3777383 239981..240652 1 NC_007576.1 hypothetical protein 240652 3777383 LSA0244 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394856.1 239981 D 314315 CDS YP_394857.1 81427858 3777384 240742..241317 1 NC_007576.1 lipoprotein precursor 241317 3777384 LSA0245 Lactobacillus sakei subsp. sakei 23K lipoprotein precursor YP_394857.1 240742 D 314315 CDS YP_394858.1 81427859 3777385 241472..243046 1 NC_007576.1 Mn(2+)/Fe(2+) transport protein 243046 mntH1 3777385 mntH1 Lactobacillus sakei subsp. sakei 23K Mn(2+)/Fe(2+) transport protein YP_394858.1 241472 D 314315 CDS YP_394859.1 81427860 3777333 243064..243498 1 NC_007576.1 universal stress protein UspA family protein 243498 usp2 3777333 usp2 Lactobacillus sakei subsp. sakei 23K universal stress protein UspA family protein YP_394859.1 243064 D 314315 CDS YP_394860.1 81427861 3777334 243609..244349 1 NC_007576.1 hypothetical protein 244349 3777334 LSA0248 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394860.1 243609 D 314315 CDS YP_394861.1 81427862 3777335 complement(244364..245428) 1 NC_007576.1 hypothetical protein 245428 3777335 LSA0249 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394861.1 244364 R 314315 CDS YP_394862.1 81427863 3777336 245582..246370 1 NC_007576.1 hypothetical protein 246370 3777336 LSA0250 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394862.1 245582 D 314315 CDS YP_394863.1 81427864 3777337 246457..247020 1 NC_007576.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 247020 efp1 3777337 efp1 Lactobacillus sakei subsp. sakei 23K elongation factor P YP_394863.1 246457 D 314315 CDS YP_394864.1 81427865 3777338 247214..248149 1 NC_007576.1 inosine-uridine preferring nucleoside hydrolase 248149 iunH1 3777338 iunH1 Lactobacillus sakei subsp. sakei 23K inosine-uridine preferring nucleoside hydrolase YP_394864.1 247214 D 314315 CDS YP_394865.1 81427866 3777339 complement(248146..249237) 1 NC_007576.1 transcriptional regulator 249237 3777339 LSA0253 Lactobacillus sakei subsp. sakei 23K transcriptional regulator YP_394865.1 248146 R 314315 CDS YP_394866.1 81427867 3777340 249406..250344 1 NC_007576.1 carbohydrate kinase 250344 3777340 LSA0254 Lactobacillus sakei subsp. sakei 23K carbohydrate kinase YP_394866.1 249406 D 314315 CDS YP_394867.1 81427868 3777224 250363..251058 1 NC_007576.1 phosphoribosyl isomerase 251058 3777224 LSA0255 Lactobacillus sakei subsp. sakei 23K phosphoribosyl isomerase YP_394867.1 250363 D 314315 CDS YP_394868.1 81427869 3777225 251107..251370 1 NC_007576.1 hypothetical protein 251370 3777225 LSA0256_a Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394868.1 251107 D 314315 CDS YP_394869.1 81427870 3777226 complement(251511..252308) 1 NC_007576.1 IS3 family transposase 252308 tnpB3-IS1520 3777226 tnpB3-IS1520 Lactobacillus sakei subsp. sakei 23K IS3 family transposase YP_394869.1 251511 R 314315 CDS YP_394870.1 81427871 3777227 complement(252329..252580) 1 NC_007576.1 IS3 family transposase 252580 tnpA3-IS1520 3777227 tnpA3-IS1520 Lactobacillus sakei subsp. sakei 23K IS3 family transposase YP_394870.1 252329 R 314315 CDS YP_394871.1 81427872 3777228 252814..253011 1 NC_007576.1 hypothetical protein 253011 3777228 LSA0257 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394871.1 252814 D 314315 CDS YP_394872.1 81427873 3777229 253021..254172 1 NC_007576.1 iron-containing alcohol dehydrogenase 254172 3777229 LSA0258 Lactobacillus sakei subsp. sakei 23K iron-containing alcohol dehydrogenase YP_394872.1 253021 D 314315 CDS YP_394873.1 81427874 3777230 254195..255385 1 NC_007576.1 pyrimidine-specific nucleoside symporter 255385 3777230 LSA0259 Lactobacillus sakei subsp. sakei 23K pyrimidine-specific nucleoside symporter YP_394873.1 254195 D 314315 CDS YP_394874.1 81427875 3777231 255502..256488 1 NC_007576.1 aldo/keto reductase 256488 3777231 LSA0260 Lactobacillus sakei subsp. sakei 23K aldo/keto reductase YP_394874.1 255502 D 314315 CDS YP_394875.1 81427876 3777829 complement(256538..257350) 1 NC_007576.1 IS150 family transposase 257350 tnpB1-ISLsa2 3777829 tnpB1-ISLsa2 Lactobacillus sakei subsp. sakei 23K IS150 family transposase YP_394875.1 256538 R 314315 CDS YP_394876.1 81427877 3777830 complement(257392..257709) 1 NC_007576.1 IS150 family transposase 257709 tnpA1-ISLsa2 3777830 tnpA1-ISLsa2 Lactobacillus sakei subsp. sakei 23K IS150 family transposase YP_394876.1 257392 R 314315 CDS YP_394877.1 81427878 3777831 complement(258072..258539) 1 NC_007576.1 hypothetical protein 258539 3777831 LSA0263 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394877.1 258072 R 314315 CDS YP_394878.1 81427879 3777832 complement(258582..260111) 1 NC_007576.1 glycine/betaine/carnitine/choline transport protein 260111 3777832 LSA0264 Lactobacillus sakei subsp. sakei 23K glycine/betaine/carnitine/choline transport protein YP_394878.1 258582 R 314315 CDS YP_394879.1 81427880 3777833 complement(260348..260881) 1 NC_007576.1 PadR family transcriptional regulator 260881 3777833 LSA0265 Lactobacillus sakei subsp. sakei 23K PadR family transcriptional regulator YP_394879.1 260348 R 314315 CDS YP_394880.1 81427881 3777834 261086..261355 1 NC_007576.1 30S ribosomal protein S14 261355 rpsN 3777834 rpsN Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S14 YP_394880.1 261086 D 314315 CDS YP_394882.1 81427883 3777836 261705..262880 1 NC_007576.1 drug:H(+) antiporter 262880 3777836 LSA0268 Lactobacillus sakei subsp. sakei 23K drug:H(+) antiporter YP_394882.1 261705 D 314315 CDS YP_394883.1 81427884 3777025 complement(262933..263604) 1 NC_007576.1 TetR family transcriptional regulator 263604 3777025 LSA0269 Lactobacillus sakei subsp. sakei 23K TetR family transcriptional regulator YP_394883.1 262933 R 314315 CDS YP_394884.1 81427885 3777026 263747..264820 1 NC_007576.1 multidrug ABC exporter, membrane-spanning/permease subunit 264820 3777026 LSA0270 Lactobacillus sakei subsp. sakei 23K multidrug ABC exporter, membrane-spanning/permease subunit YP_394884.1 263747 D 314315 CDS YP_394885.1 81427886 3777027 264817..265458 1 NC_007576.1 multidrug ABC exporter, ATP-binding subunit 265458 3777027 LSA0271 Lactobacillus sakei subsp. sakei 23K multidrug ABC exporter, ATP-binding subunit YP_394885.1 264817 D 314315 CDS YP_394886.1 81427887 3777028 265462..267255 1 NC_007576.1 multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunits 267255 3777028 LSA0272 Lactobacillus sakei subsp. sakei 23K multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunits YP_394886.1 265462 D 314315 CDS YP_394887.1 81427888 3777029 complement(267432..268523) 1 NC_007576.1 DNA helicase (C-terminal fragment), authentic frameshit 268523 3777029 LSA0273 Lactobacillus sakei subsp. sakei 23K DNA helicase (C-terminal fragment), authentic frameshit YP_394887.1 267432 R 314315 CDS YP_394888.1 81427889 3777030 complement(268534..269481) 1 NC_007576.1 DNA helicase (N-terminal fragment), authentic frameshift 269481 3777030 LSA0274 Lactobacillus sakei subsp. sakei 23K DNA helicase (N-terminal fragment), authentic frameshift YP_394888.1 268534 R 314315 CDS YP_394889.1 81427890 3777031 complement(269925..270722) 1 NC_007576.1 serine/tyrosine protein phosphatase 270722 3777031 LSA0275 Lactobacillus sakei subsp. sakei 23K serine/tyrosine protein phosphatase YP_394889.1 269925 R 314315 CDS YP_394890.1 81427891 3777032 270971..272452 1 NC_007576.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 272452 guaB 3777032 guaB Lactobacillus sakei subsp. sakei 23K inosine 5'-monophosphate dehydrogenase YP_394890.1 270971 D 314315 CDS YP_394891.1 81427892 3777033 272611..273297 1 NC_007576.1 two-component system response regulator 273297 3777033 LSA0277 Lactobacillus sakei subsp. sakei 23K two-component system response regulator YP_394891.1 272611 D 314315 CDS YP_394892.1 81427893 3777034 273297..274496 1 NC_007576.1 two-component system sensor histidine kinase 274496 3777034 LSA0278 Lactobacillus sakei subsp. sakei 23K two-component system sensor histidine kinase YP_394892.1 273297 D 314315 CDS YP_394893.1 81427894 3777035 274535..275821 1 NC_007576.1 D-alanyl-D-alanine carboxypeptidase 275821 dacA 3777035 dacA Lactobacillus sakei subsp. sakei 23K D-alanyl-D-alanine carboxypeptidase YP_394893.1 274535 D 314315 CDS YP_394894.1 81427895 3777036 275970..277511 1 NC_007576.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 277511 murE 3777036 murE Lactobacillus sakei subsp. sakei 23K UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_394894.1 275970 D 314315 CDS YP_394895.1 81427896 3777037 277534..278157 1 NC_007576.1 lipoprotein precursor 278157 3777037 LSA0281 Lactobacillus sakei subsp. sakei 23K lipoprotein precursor YP_394895.1 277534 D 314315 CDS YP_394896.1 81427897 3777038 278307..279194 1 NC_007576.1 zinc/iron ABC transporter substrate-binding lipoprotein 279194 3777038 LSA0282 Lactobacillus sakei subsp. sakei 23K zinc/iron ABC transporter substrate-binding lipoprotein YP_394896.1 278307 D 314315 CDS YP_394897.1 81427898 3777039 279191..279871 1 NC_007576.1 zinc/iron ABC transporter ATP-binding subunit 279871 3777039 LSA0283 Lactobacillus sakei subsp. sakei 23K zinc/iron ABC transporter ATP-binding subunit YP_394897.1 279191 D 314315 CDS YP_394898.1 81427899 3777040 279906..280682 1 NC_007576.1 zinc/iron ABC transporter permease 280682 3777040 LSA0284 Lactobacillus sakei subsp. sakei 23K zinc/iron ABC transporter permease YP_394898.1 279906 D 314315 CDS YP_394899.1 81427900 3777041 complement(280719..282524) 1 NC_007576.1 oligoendopeptidase F1 282524 pepF1 3777041 pepF1 Lactobacillus sakei subsp. sakei 23K oligoendopeptidase F1 YP_394899.1 280719 R 314315 CDS YP_394900.1 81427901 3777129 282718..283905 1 NC_007576.1 LytR family transcriptional regulator 283905 3777129 LSA0286 Lactobacillus sakei subsp. sakei 23K LytR family transcriptional regulator YP_394900.1 282718 D 314315 CDS YP_394901.1 81427902 3777130 284050..285285 1 NC_007576.1 pyrimidine-specific nucleoside symporter 285285 3777130 LSA0287 Lactobacillus sakei subsp. sakei 23K pyrimidine-specific nucleoside symporter YP_394901.1 284050 D 314315 CDS YP_394902.1 81427903 3777131 285590..286321 1 NC_007576.1 GntR family transcriptional regulator 286321 3777131 LSA0288 Lactobacillus sakei subsp. sakei 23K GntR family transcriptional regulator YP_394902.1 285590 D 314315 CDS YP_394903.1 81427904 3777132 286496..288859 1 NC_007576.1 phosphoketolase 288859 xpk 3777132 xpk Lactobacillus sakei subsp. sakei 23K phosphoketolase YP_394903.1 286496 D 314315 CDS YP_394904.1 81427905 3777133 288994..290481 1 NC_007576.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 290481 gltX 3777133 gltX Lactobacillus sakei subsp. sakei 23K glutamyl-tRNA synthetase YP_394904.1 288994 D 314315 CDS YP_394905.1 81427906 3777134 290616..291638 1 NC_007576.1 2-dehydro-3-deoxygluconokinase 291638 kdgK 3777134 kdgK Lactobacillus sakei subsp. sakei 23K 2-dehydro-3-deoxygluconokinase YP_394905.1 290616 D 314315 CDS YP_394906.1 81427907 3777135 291710..292480 1 NC_007576.1 acetoin reductase 292480 budC 3777135 budC Lactobacillus sakei subsp. sakei 23K acetoin reductase YP_394906.1 291710 D 314315 CDS YP_394907.1 81427908 3777136 complement(292531..292842) 1 NC_007576.1 XRE family transcriptional regulator 292842 3777136 LSA0293 Lactobacillus sakei subsp. sakei 23K XRE family transcriptional regulator YP_394907.1 292531 R 314315 CDS YP_394908.1 81427909 3777358 293046..293642 1 NC_007576.1 lipoprotein precursor 293642 3777358 LSA0294 Lactobacillus sakei subsp. sakei 23K lipoprotein precursor YP_394908.1 293046 D 314315 CDS YP_394909.1 81427910 3777359 293639..293992 1 NC_007576.1 hypothetical protein 293992 3777359 LSA0295 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394909.1 293639 D 314315 CDS YP_394910.1 81427911 3777360 complement(294048..294890) 1 NC_007576.1 gluconate operon transcriptional regulator 294890 gntR 3777360 gntR Lactobacillus sakei subsp. sakei 23K gluconate operon transcriptional regulator YP_394910.1 294048 R 314315 CDS YP_394911.1 81427912 3777361 295038..295937 1 NC_007576.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 295937 gntZ 3777361 gntZ Lactobacillus sakei subsp. sakei 23K 6-phosphogluconate dehydrogenase YP_394911.1 295038 D 314315 CDS YP_394912.1 81427913 3777362 295972..297531 1 NC_007576.1 gluconokinase 297531 gntK 3777362 gntK Lactobacillus sakei subsp. sakei 23K gluconokinase YP_394912.1 295972 D 314315 CDS YP_394913.1 81427914 3777363 297622..298974 1 NC_007576.1 gluconate:H(+) symporter 298974 gntP 3777363 gntP Lactobacillus sakei subsp. sakei 23K gluconate:H(+) symporter YP_394913.1 297622 D 314315 CDS YP_394914.1 81427915 3777364 299266..300150 1 NC_007576.1 hypothetical protein 300150 3777364 LSA0300 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394914.1 299266 D 314315 CDS YP_394915.1 81427916 3777365 300163..300288 1 NC_007576.1 hypothetical protein 300288 3777365 LSA0301 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394915.1 300163 D 314315 CDS YP_394916.1 81427917 3777541 complement(300337..301446) 1 NC_007576.1 anion:Na(+) symporter 301446 3777541 LSA0302 Lactobacillus sakei subsp. sakei 23K anion:Na(+) symporter YP_394916.1 300337 R 314315 CDS YP_394917.1 81427918 3777542 301745..302095 1 NC_007576.1 hypothetical protein 302095 3777542 LSA0303 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394917.1 301745 D 314315 CDS YP_394918.1 81427919 3777543 302163..302246 1 NC_007576.1 hypothetical protein 302246 3777543 LSA0304 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394918.1 302163 D 314315 CDS YP_394919.1 81427920 3777544 302410..303954 1 NC_007576.1 drug resistance ABC transporter ATPase 303954 3777544 LSA0305 Lactobacillus sakei subsp. sakei 23K drug resistance ABC transporter ATPase YP_394919.1 302410 D 314315 CDS YP_394920.1 81427921 3777545 304048..305655 1 NC_007576.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 305655 aspD 3777545 aspD Lactobacillus sakei subsp. sakei 23K aspartate aminotransferase YP_394920.1 304048 D 314315 CDS YP_394921.1 81427922 3777546 311169..311504 1 NC_007576.1 thioredoxin 311504 trxA2 3777546 trxA2 Lactobacillus sakei subsp. sakei 23K thioredoxin YP_394921.1 311169 D 314315 CDS YP_394922.1 81427923 3777547 complement(311555..312736) 1 NC_007576.1 drug:H(+) antiporter 312736 3777547 LSA0308 Lactobacillus sakei subsp. sakei 23K drug:H(+) antiporter YP_394922.1 311555 R 314315 CDS YP_394923.1 81427924 3777548 312970..313728 1 NC_007576.1 hypothetical protein 313728 3777548 LSA0309 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394923.1 312970 D 314315 CDS YP_394924.1 81427925 3777549 313746..314213 1 NC_007576.1 hypothetical protein 314213 3777549 LSA0310 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394924.1 313746 D 314315 CDS YP_394925.1 81427926 3777550 314604..316001 1 NC_007576.1 glutamate/aspartate:cation symporter 316001 3777550 LSA0311 Lactobacillus sakei subsp. sakei 23K glutamate/aspartate:cation symporter YP_394925.1 314604 D 314315 CDS YP_394926.1 81427927 3777551 316023..317357 1 NC_007576.1 CoADR; specific for coenzyme A disulfide; requires NADH; involved in protecting cells against reactive oxygen species by recycling coenzyme A disulfide which can reduce hydrogen peroxide; coenzyme A disulfide reductase 317357 3777551 LSA0312 Lactobacillus sakei subsp. sakei 23K coenzyme A disulfide reductase YP_394926.1 316023 D 314315 CDS YP_394927.1 81427928 3777552 317566..319107 1 NC_007576.1 cell surface protein 319107 3777552 LSA0313 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_394927.1 317566 D 314315 CDS YP_394928.1 81427929 3777553 319208..319861 1 NC_007576.1 hypothetical protein 319861 3777553 LSA0314 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394928.1 319208 D 314315 CDS YP_394929.1 81427930 3777554 complement(319948..320589) 1 NC_007576.1 hypothetical protein 320589 3777554 LSA0315 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394929.1 319948 R 314315 CDS YP_394930.1 81427931 3777555 320963..321613 1 NC_007576.1 L-serine dehydratase subunit beta 321613 sdhB 3777555 sdhB Lactobacillus sakei subsp. sakei 23K L-serine dehydratase subunit beta YP_394930.1 320963 D 314315 CDS YP_394931.1 81427932 3777556 321630..322523 1 NC_007576.1 L-serine dehydratase subunit alpha 322523 sdhA 3777556 sdhA Lactobacillus sakei subsp. sakei 23K L-serine dehydratase subunit alpha YP_394931.1 321630 D 314315 CDS YP_394932.1 81427933 3778033 322553..324490 1 NC_007576.1 oligopeptide transporter 324490 3778033 LSA0318 Lactobacillus sakei subsp. sakei 23K oligopeptide transporter YP_394932.1 322553 D 314315 CDS YP_394933.1 81427934 3778034 324471..324824 1 NC_007576.1 hypothetical protein 324824 3778034 LSA0319 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394933.1 324471 D 314315 CDS YP_394934.1 81427935 3778035 324882..326303 1 NC_007576.1 peptidase U34 326303 pepD3 3778035 pepD3 Lactobacillus sakei subsp. sakei 23K peptidase U34 YP_394934.1 324882 D 314315 CDS YP_394935.1 81427936 3778036 326379..327230 1 NC_007576.1 hypothetical protein 327230 3778036 LSA0321 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394935.1 326379 D 314315 CDS YP_394936.1 81427937 3778037 complement(327279..327494) 1 NC_007576.1 hypothetical protein 327494 3778037 LSA0323 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394936.1 327279 R 314315 CDS YP_394937.1 81427938 3778038 327693..328016 1 NC_007576.1 haloacid dehalogenase 328016 3778038 LSA0324 Lactobacillus sakei subsp. sakei 23K haloacid dehalogenase YP_394937.1 327693 D 314315 CDS YP_394938.1 81427939 3778039 328051..328536 1 NC_007576.1 haloacid dehalogenase 328536 3778039 LSA0325 Lactobacillus sakei subsp. sakei 23K haloacid dehalogenase YP_394938.1 328051 D 314315 CDS YP_394939.1 81427940 3778040 complement(328744..331041) 1 NC_007576.1 DNA helicase 331041 3778040 LSA0326 Lactobacillus sakei subsp. sakei 23K DNA helicase YP_394939.1 328744 R 314315 CDS YP_394940.1 81427941 3778348 331397..332413 1 NC_007576.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 332413 trpS 3778348 trpS Lactobacillus sakei subsp. sakei 23K tryptophanyl-tRNA synthetase YP_394940.1 331397 D 314315 CDS YP_394941.1 81427942 3778349 332622..333989 1 NC_007576.1 drug:Na(+) antiporter (drug efflux pump) 333989 3778349 LSA0328 Lactobacillus sakei subsp. sakei 23K drug:Na(+) antiporter (drug efflux pump) YP_394941.1 332622 D 314315 CDS YP_394942.1 81427943 3778350 333982..334518 1 NC_007576.1 DNA-entry nuclease (N-terminal fragment), authentic frameshift 334518 3778350 LSA0329 Lactobacillus sakei subsp. sakei 23K DNA-entry nuclease (N-terminal fragment), authentic frameshift YP_394942.1 333982 D 314315 CDS YP_394943.1 81427944 3778351 334564..334779 1 NC_007576.1 DNA-entry nuclease (C-terminal fragment), authentic framesshift 334779 3778351 LSA0330 Lactobacillus sakei subsp. sakei 23K DNA-entry nuclease (C-terminal fragment), authentic framesshift YP_394943.1 334564 D 314315 CDS YP_394944.1 81427945 3778352 334876..335478 1 NC_007576.1 hypothetical protein 335478 3778352 LSA0331 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394944.1 334876 D 314315 CDS YP_394945.1 81427946 3778353 335565..338186 1 NC_007576.1 hypothetical protein 338186 3778353 LSA0332 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394945.1 335565 D 314315 CDS YP_394946.1 81427947 3778354 338196..338801 1 NC_007576.1 nucleotide methyltransferase 338801 3778354 LSA0333 Lactobacillus sakei subsp. sakei 23K nucleotide methyltransferase YP_394946.1 338196 D 314315 CDS YP_394947.1 81427948 3778355 338874..339218 1 NC_007576.1 hypothetical protein 339218 3778355 LSA0334 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394947.1 338874 D 314315 CDS YP_394948.1 81427949 3778356 339299..339817 1 NC_007576.1 cytidine deaminase 339817 3778356 LSA0335 Lactobacillus sakei subsp. sakei 23K cytidine deaminase YP_394948.1 339299 D 314315 CDS YP_394949.1 81427950 3778685 340242..341957 1 NC_007576.1 DNA-directed DNA polymerase III subunit gamma/tau 341957 dnaX 3778685 dnaX Lactobacillus sakei subsp. sakei 23K DNA-directed DNA polymerase III subunit gamma/tau YP_394949.1 340242 D 314315 CDS YP_394950.1 81427951 3778686 341984..342292 1 NC_007576.1 hypothetical protein 342292 3778686 LSA0337 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394950.1 341984 D 314315 CDS YP_394951.1 81427952 3778687 342318..342914 1 NC_007576.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 342914 recR 3778687 recR Lactobacillus sakei subsp. sakei 23K recombination protein RecR YP_394951.1 342318 D 314315 CDS YP_394952.1 81427953 3778688 342931..343185 1 NC_007576.1 hypothetical protein 343185 3778688 LSA0339 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394952.1 342931 D 314315 CDS YP_394953.1 81427954 3778689 343329..343973 1 NC_007576.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 343973 tmk 3778689 tmk Lactobacillus sakei subsp. sakei 23K thymidylate kinase YP_394953.1 343329 D 314315 CDS YP_394954.1 81427955 3778690 343988..344317 1 NC_007576.1 hypothetical protein 344317 3778690 LSA0341 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394954.1 343988 D 314315 CDS YP_394955.1 81427956 3778691 344321..345313 1 NC_007576.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 345313 holB 3778691 holB Lactobacillus sakei subsp. sakei 23K DNA polymerase III subunit delta' YP_394955.1 344321 D 314315 CDS YP_394956.1 81427957 3778692 345365..345718 1 NC_007576.1 hypothetical protein 345718 3778692 LSA0343 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394956.1 345365 D 314315 CDS YP_394957.1 81427958 3778782 345817..346695 1 NC_007576.1 methyltransferase 346695 3778782 LSA0344 Lactobacillus sakei subsp. sakei 23K methyltransferase YP_394957.1 345817 D 314315 CDS YP_394958.1 81427959 3778783 346706..347452 1 NC_007576.1 acyl-ACP thioesterase 347452 3778783 LSA0345 Lactobacillus sakei subsp. sakei 23K acyl-ACP thioesterase YP_394958.1 346706 D 314315 CDS YP_394959.1 81427960 3778784 347520..347717 1 NC_007576.1 hypothetical protein 347717 3778784 LSA0346 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394959.1 347520 D 314315 CDS YP_394960.1 81427961 3778785 complement(347803..348777) 1 NC_007576.1 L-asparaginase 348777 asnA1 3778785 asnA1 Lactobacillus sakei subsp. sakei 23K L-asparaginase YP_394960.1 347803 R 314315 CDS YP_394961.1 81427962 3778786 349062..349598 1 NC_007576.1 hypothetical protein 349598 3778786 LSA0348 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394961.1 349062 D 314315 CDS YP_394962.1 81427963 3778787 349739..350464 1 NC_007576.1 O-sialoglycoprotein metallo-endopeptidase 350464 3778787 LSA0349 Lactobacillus sakei subsp. sakei 23K O-sialoglycoprotein metallo-endopeptidase YP_394962.1 349739 D 314315 CDS YP_394963.1 81427964 3778788 350526..350993 1 NC_007576.1 GNAT family acetyltransferase 350993 3778788 LSA0350 Lactobacillus sakei subsp. sakei 23K GNAT family acetyltransferase YP_394963.1 350526 D 314315 CDS YP_394964.1 81427965 3778789 351004..352038 1 NC_007576.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 352038 3778789 LSA0351 Lactobacillus sakei subsp. sakei 23K DNA-binding/iron metalloprotein/AP endonuclease YP_394964.1 351004 D 314315 CDS YP_394965.1 81427966 3777192 complement(352363..353622) 1 NC_007576.1 hypothetical protein 353622 3777192 LSA0352 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394965.1 352363 R 314315 CDS YP_394966.1 81427967 3777193 353900..354217 1 NC_007576.1 PTS system cellobiose transporter subunit IIB 354217 3777193 LSA0353 Lactobacillus sakei subsp. sakei 23K PTS system cellobiose transporter subunit IIB YP_394966.1 353900 D 314315 CDS YP_394967.1 81427968 3777194 354317..354679 1 NC_007576.1 hypothetical protein 354679 3777194 LSA0354 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394967.1 354317 D 314315 CDS YP_394968.1 81427969 3777195 complement(354719..356665) 1 NC_007576.1 drug resistance ABC transporter ATPase 356665 3777195 LSA0355 Lactobacillus sakei subsp. sakei 23K drug resistance ABC transporter ATPase YP_394968.1 354719 R 314315 CDS YP_394969.1 81427970 3777196 356863..357510 1 NC_007576.1 modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex 357510 3777196 LSA0356 Lactobacillus sakei subsp. sakei 23K redox-sensing transcriptional repressor Rex YP_394969.1 356863 D 314315 CDS YP_394970.1 81427971 3777197 complement(357560..358192) 1 NC_007576.1 hypothetical protein 358192 3777197 LSA0357 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394970.1 357560 R 314315 CDS YP_394971.1 81427972 3777198 358364..358648 1 NC_007576.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 358648 groES 3777198 groES Lactobacillus sakei subsp. sakei 23K co-chaperonin GroES YP_394971.1 358364 D 314315 CDS YP_394972.1 81427973 3777199 358702..360327 1 NC_007576.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 360327 groEL 3777199 groEL Lactobacillus sakei subsp. sakei 23K molecular chaperone GroEL YP_394972.1 358702 D 314315 CDS YP_394973.1 81427974 3778324 360954..362705 1 NC_007576.1 amino acid/polyamine transport protein 362705 3778324 LSA0360 Lactobacillus sakei subsp. sakei 23K amino acid/polyamine transport protein YP_394973.1 360954 D 314315 CDS YP_394974.1 81427975 3778325 362960..363766 1 NC_007576.1 hypothetical protein 363766 3778325 LSA0361 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394974.1 362960 D 314315 CDS YP_394975.1 81427976 3778326 363788..366391 1 NC_007576.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 366391 mutS 3778326 mutS Lactobacillus sakei subsp. sakei 23K DNA mismatch repair protein MutS YP_394975.1 363788 D 314315 CDS YP_394976.1 81427977 3778327 366412..368373 1 NC_007576.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 368373 mutL 3778327 mutL Lactobacillus sakei subsp. sakei 23K DNA mismatch repair protein YP_394976.1 366412 D 314315 CDS YP_394977.1 81427978 3778328 368373..368918 1 NC_007576.1 inhibitor of septum formation (Maf protein) 368918 maf 3778328 maf Lactobacillus sakei subsp. sakei 23K inhibitor of septum formation (Maf protein) YP_394977.1 368373 D 314315 CDS YP_394978.1 81427979 3778329 368931..369494 1 NC_007576.1 hypothetical protein 369494 3778329 LSA0365 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394978.1 368931 D 314315 CDS YP_394979.1 81427980 3778330 369905..370516 1 NC_007576.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 370516 ruvA 3778330 ruvA Lactobacillus sakei subsp. sakei 23K Holliday junction DNA helicase RuvA YP_394979.1 369905 D 314315 CDS YP_394980.1 81427981 3778331 370529..371536 1 NC_007576.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 371536 ruvB 3778331 ruvB Lactobacillus sakei subsp. sakei 23K Holliday junction DNA helicase RuvB YP_394980.1 370529 D 314315 CDS YP_394981.1 81427982 3777757 371551..372582 1 NC_007576.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 372582 queA 3777757 queA Lactobacillus sakei subsp. sakei 23K S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_394981.1 371551 D 314315 CDS YP_394982.1 81427983 3777758 372606..373130 1 NC_007576.1 GNAT family acetyltransferase 373130 3777758 LSA0369 Lactobacillus sakei subsp. sakei 23K GNAT family acetyltransferase YP_394982.1 372606 D 314315 CDS YP_394983.1 81427984 3777759 373337..374572 1 NC_007576.1 arginine deiminase 374572 arcA 3777759 arcA Lactobacillus sakei subsp. sakei 23K arginine deiminase YP_394983.1 373337 D 314315 CDS YP_394984.1 81427985 3777760 374598..375614 1 NC_007576.1 catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; ornithine carbamoyltransferase 375614 arcB 3777760 arcB Lactobacillus sakei subsp. sakei 23K ornithine carbamoyltransferase YP_394984.1 374598 D 314315 CDS YP_394985.1 81427986 3777761 375713..376657 1 NC_007576.1 catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 376657 arcC 3777761 arcC Lactobacillus sakei subsp. sakei 23K carbamate kinase YP_394985.1 375713 D 314315 CDS YP_394986.1 81427987 3777762 376669..377784 1 NC_007576.1 associated with arginine deiminase pathway genes; probably functions in arginine catabolism; transaminase 377784 arcT 3777762 arcT Lactobacillus sakei subsp. sakei 23K transaminase YP_394986.1 376669 D 314315 CDS YP_394987.1 81427988 3777763 377818..379245 1 NC_007576.1 arginine/ornithine antiporter 379245 arcD 3777763 arcD Lactobacillus sakei subsp. sakei 23K arginine/ornithine antiporter YP_394987.1 377818 D 314315 CDS YP_394988.1 81427989 3777764 379317..380018 1 NC_007576.1 arginine deiminase 380018 arcR 3777764 arcR Lactobacillus sakei subsp. sakei 23K arginine deiminase YP_394988.1 379317 D 314315 CDS YP_394989.1 81427990 3778709 380156..381715 1 NC_007576.1 transporter 381715 3778709 LSA0376 Lactobacillus sakei subsp. sakei 23K transporter YP_394989.1 380156 D 314315 CDS YP_394990.1 81427991 3778710 381807..382949 1 NC_007576.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 382949 tgt 3778710 tgt Lactobacillus sakei subsp. sakei 23K queuine tRNA-ribosyltransferase YP_394990.1 381807 D 314315 CDS YP_394991.1 81427992 3778711 383023..383379 1 NC_007576.1 hypothetical protein 383379 3778711 LSA0378 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394991.1 383023 D 314315 CDS YP_394992.1 81427993 3778712 383622..386216 1 NC_007576.1 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 386216 adhE 3778712 adhE Lactobacillus sakei subsp. sakei 23K bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_394992.1 383622 D 314315 CDS YP_394993.1 81427994 3778713 386400..387062 1 NC_007576.1 metal(Iron)-dependent transcriptional regulator 387062 3778713 LSA0380 Lactobacillus sakei subsp. sakei 23K metal(Iron)-dependent transcriptional regulator YP_394993.1 386400 D 314315 CDS YP_394994.1 81427995 3778714 387082..388578 1 NC_007576.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 388578 zwf 3778714 zwf Lactobacillus sakei subsp. sakei 23K glucose-6-phosphate 1-dehydrogenase YP_394994.1 387082 D 314315 CDS YP_394995.1 81427996 3778715 388652..389782 1 NC_007576.1 DNA-damage-inducible protein P 389782 dinP 3778715 dinP Lactobacillus sakei subsp. sakei 23K DNA-damage-inducible protein P YP_394995.1 388652 D 314315 CDS YP_394996.1 81427997 3778716 389902..391224 1 NC_007576.1 hypothetical protein 391224 3778716 LSA0383 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394996.1 389902 D 314315 CDS YP_394997.1 81427998 3778537 391228..392181 1 NC_007576.1 DHH family phosphoesterase 392181 3778537 LSA0384 Lactobacillus sakei subsp. sakei 23K DHH family phosphoesterase YP_394997.1 391228 D 314315 CDS YP_394998.1 81427999 3778538 392226..393581 1 NC_007576.1 ATP-dependent DNA/RNA helicase 393581 3778538 LSA0385 Lactobacillus sakei subsp. sakei 23K ATP-dependent DNA/RNA helicase YP_394998.1 392226 D 314315 CDS YP_394999.1 81428000 3778539 393619..394605 1 NC_007576.1 hypothetical protein 394605 3778539 LSA0386 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_394999.1 393619 D 314315 CDS YP_395000.1 81428001 3778540 394850..397486 1 NC_007576.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 397486 alaS 3778540 alaS Lactobacillus sakei subsp. sakei 23K alanyl-tRNA synthetase YP_395000.1 394850 D 314315 CDS YP_395001.1 81428002 3778541 397672..397932 1 NC_007576.1 hypothetical protein 397932 3778541 LSA0388 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395001.1 397672 D 314315 CDS YP_395002.1 81428003 3778542 397932..398375 1 NC_007576.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 398375 3778542 LSA0389 Lactobacillus sakei subsp. sakei 23K Holliday junction resolvase-like protein YP_395002.1 397932 D 314315 CDS YP_395003.1 81428004 3778543 398425..398736 1 NC_007576.1 hypothetical protein 398736 3778543 LSA0390 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395003.1 398425 D 314315 CDS YP_395004.1 81428005 3778544 complement(399024..399941) 1 NC_007576.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease HIII 399941 rnhC 3778544 rnhC Lactobacillus sakei subsp. sakei 23K ribonuclease HIII YP_395004.1 399024 R 314315 CDS YP_395005.1 81428006 3778545 400135..400674 1 NC_007576.1 hypothetical protein 400674 3778545 LSA0392 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395005.1 400135 D 314315 CDS YP_395006.1 81428007 3778529 400730..403093 1 NC_007576.1 MutS family DNA mismatch repair protein 403093 3778529 LSA0393 Lactobacillus sakei subsp. sakei 23K MutS family DNA mismatch repair protein YP_395006.1 400730 D 314315 CDS YP_395007.1 81428008 3778530 403233..403544 1 NC_007576.1 thioredoxin 403544 trxA3 3778530 trxA3 Lactobacillus sakei subsp. sakei 23K thioredoxin YP_395007.1 403233 D 314315 CDS YP_395008.1 81428009 3778531 403912..405444 1 NC_007576.1 transfers D-alanine to the D-alanyl carrier protein during the incorporation of D-alanine into lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 1 405444 dltA 3778531 dltA Lactobacillus sakei subsp. sakei 23K D-alanine--poly(phosphoribitol) ligase subunit 1 YP_395008.1 403912 D 314315 CDS YP_395009.1 81428010 3778532 405437..406645 1 NC_007576.1 D-alanyl transfer protein membrane protein 406645 dltB 3778532 dltB Lactobacillus sakei subsp. sakei 23K D-alanyl transfer protein membrane protein YP_395009.1 405437 D 314315 CDS YP_395010.1 81428011 3778533 406675..406911 1 NC_007576.1 D-alanyl carrier protein subunit; involved in the incorporation of D-alanine into membrane-associated D-alanyl-lipoteichoic acid; D-alanyl carrier protein is the acceptor of activated D-alanine which it donates to a membrane acceptor(D-alanyl transferase) for incorporation into membrane lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 2 406911 dltC 3778533 dltC Lactobacillus sakei subsp. sakei 23K D-alanine--poly(phosphoribitol) ligase subunit 2 YP_395010.1 406675 D 314315 CDS YP_395011.1 81428012 3778534 406913..408184 1 NC_007576.1 lipoteichoic acid D-alanyl esterase 408184 dltD 3778534 dltD Lactobacillus sakei subsp. sakei 23K lipoteichoic acid D-alanyl esterase YP_395011.1 406913 D 314315 CDS YP_395012.1 81428013 3778535 complement(408363..409286) 1 NC_007576.1 Iron(III)-compound ABC transporter substrate-binding lipoprotein 409286 3778535 LSA0399 Lactobacillus sakei subsp. sakei 23K Iron(III)-compound ABC transporter substrate-binding lipoprotein YP_395012.1 408363 R 314315 CDS YP_395013.1 81428014 3778536 409459..410262 1 NC_007576.1 Iron(III)-compound ABC transporter ATP-binding subunit 410262 3778536 LSA0400 Lactobacillus sakei subsp. sakei 23K Iron(III)-compound ABC transporter ATP-binding subunit YP_395013.1 409459 D 314315 CDS YP_395014.1 81428015 3778521 410252..411244 1 NC_007576.1 Iron(III)-compound ABC transporter permease 411244 3778521 LSA0401 Lactobacillus sakei subsp. sakei 23K Iron(III)-compound ABC transporter permease YP_395014.1 410252 D 314315 CDS YP_395015.1 81428016 3778522 411241..412242 1 NC_007576.1 Iron(III)-compound ABC transporter permease 412242 3778522 LSA0402 Lactobacillus sakei subsp. sakei 23K Iron(III)-compound ABC transporter permease YP_395015.1 411241 D 314315 CDS YP_395016.1 81428017 3778523 412250..413236 1 NC_007576.1 thioredoxin reductase 413236 3778523 LSA0403 Lactobacillus sakei subsp. sakei 23K thioredoxin reductase YP_395016.1 412250 D 314315 CDS YP_395017.1 81428018 3778524 complement(413295..413939) 1 NC_007576.1 hypothetical protein 413939 3778524 LSA0404 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395017.1 413295 R 314315 CDS YP_395018.1 81428019 3778525 414104..414928 1 NC_007576.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 414928 murI 3778525 murI Lactobacillus sakei subsp. sakei 23K glutamate racemase YP_395018.1 414104 D 314315 CDS YP_395019.1 81428020 3778526 414909..416141 1 NC_007576.1 nucleoside triphosphatase 416141 3778526 LSA0406 Lactobacillus sakei subsp. sakei 23K nucleoside triphosphatase YP_395019.1 414909 D 314315 CDS YP_395020.1 81428021 3778527 416153..416674 1 NC_007576.1 phosphoesterase 416674 3778527 LSA0407 Lactobacillus sakei subsp. sakei 23K phosphoesterase YP_395020.1 416153 D 314315 CDS YP_395021.1 81428022 3778528 416772..417257 1 NC_007576.1 hypothetical protein 417257 3778528 LSA0408 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395021.1 416772 D 314315 CDS YP_395022.1 81428023 3778480 complement(417565..418461) 1 NC_007576.1 hypothetical protein 418461 3778480 LSA0409 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395022.1 417565 R 314315 CDS YP_395023.1 81428024 3778481 complement(418486..419373) 1 NC_007576.1 mechanosensitive ion channel MscS 419373 3778481 LSA0410 Lactobacillus sakei subsp. sakei 23K mechanosensitive ion channel MscS YP_395023.1 418486 R 314315 CDS YP_395024.1 81428025 3778482 419531..419965 1 NC_007576.1 hypothetical protein 419965 3778482 LSA0411 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395024.1 419531 D 314315 CDS YP_395025.1 81428026 3778483 419971..420408 1 NC_007576.1 hypothetical protein 420408 3778483 LSA0412 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395025.1 419971 D 314315 CDS YP_395026.1 81428027 3778484 complement(420697..420774) 1 NC_007576.1 hypothetical protein 420774 3778484 LSA0413 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395026.1 420697 R 314315 CDS YP_395027.1 81428028 3778485 complement(420820..421917) 1 NC_007576.1 Xaa-Pro dipeptidase 421917 pepQ 3778485 pepQ Lactobacillus sakei subsp. sakei 23K Xaa-Pro dipeptidase YP_395027.1 420820 R 314315 CDS YP_395028.1 81428029 3778486 422134..423135 1 NC_007576.1 CcpA transcriptional regulator (catabolic control protein A) 423135 CcpA 3778486 CcpA Lactobacillus sakei subsp. sakei 23K CcpA transcriptional regulator (catabolic control protein A) YP_395028.1 422134 D 314315 CDS YP_395029.1 81428030 3778487 complement(423183..425738) 1 NC_007576.1 bifunctional glycosyltransferase/transpeptidase penicillin-binding protein 1B 425738 pbp1B 3778487 pbp1B Lactobacillus sakei subsp. sakei 23K bifunctional glycosyltransferase/transpeptidase penicillin-binding protein 1B YP_395029.1 423183 R 314315 CDS YP_395030.1 81428031 3778456 426022..426729 1 NC_007576.1 glucosamine-6-phosphate deaminase 426729 nagB 3778456 nagB Lactobacillus sakei subsp. sakei 23K glucosamine-6-phosphate deaminase YP_395030.1 426022 D 314315 CDS YP_395031.1 81428032 3778457 complement(427058..427762) 1 NC_007576.1 hypothetical protein 427762 3778457 LSA0418 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395031.1 427058 R 314315 CDS YP_395032.1 81428033 3778458 complement(427759..428652) 1 NC_007576.1 drug:H(+) antiporter (C-terminal fragment), authentic frameshift 428652 3778458 LSA0419 Lactobacillus sakei subsp. sakei 23K drug:H(+) antiporter (C-terminal fragment), authentic frameshift YP_395032.1 427759 R 314315 CDS YP_395033.1 81428034 3778459 complement(428621..429235) 1 NC_007576.1 drug:H(+) antiporter (N-terminal fragment), authentic frameshift 429235 3778459 LSA0420 Lactobacillus sakei subsp. sakei 23K drug:H(+) antiporter (N-terminal fragment), authentic frameshift YP_395033.1 428621 R 314315 CDS YP_395034.1 81428035 3778460 429388..429828 1 NC_007576.1 MerR family transcriptional regulator 429828 3778460 LSA0421 Lactobacillus sakei subsp. sakei 23K MerR family transcriptional regulator YP_395034.1 429388 D 314315 CDS YP_395035.1 81428036 3778461 429984..431216 1 NC_007576.1 hypothetical protein 431216 3778461 LSA0422 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395035.1 429984 D 314315 CDS YP_395036.1 81428037 3778462 431268..431414 1 NC_007576.1 hypothetical protein 431414 3778462 LSA0423 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395036.1 431268 D 314315 CDS YP_395037.1 81428038 3778463 complement(431474..432877) 1 NC_007576.1 divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases; dipeptidase PepV 432877 pepV 3778463 pepV Lactobacillus sakei subsp. sakei 23K dipeptidase PepV YP_395037.1 431474 R 314315 CDS YP_395038.1 81428039 3778251 complement(433070..435160) 1 NC_007576.1 heavy metal-transporting P-type ATPase 435160 3778251 LSA0425 Lactobacillus sakei subsp. sakei 23K heavy metal-transporting P-type ATPase YP_395038.1 433070 R 314315 CDS YP_395039.1 81428040 3778252 complement(435366..435698) 1 NC_007576.1 ArsR family transcriptional regulator 435698 3778252 LSA0426 Lactobacillus sakei subsp. sakei 23K ArsR family transcriptional regulator YP_395039.1 435366 R 314315 CDS YP_395040.1 81428041 3778253 complement(435713..437041) 1 NC_007576.1 cell surface glycerophosphoryl diester phosphodiesterase 437041 3778253 LSA0427 Lactobacillus sakei subsp. sakei 23K cell surface glycerophosphoryl diester phosphodiesterase YP_395040.1 435713 R 314315 CDS YP_395041.1 81428042 3778254 437335..437649 1 NC_007576.1 hypothetical protein 437649 3778254 LSA0428 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395041.1 437335 D 314315 CDS YP_395042.1 81428043 3778255 437662..438264 1 NC_007576.1 phosphoesterase 438264 3778255 LSA0429 Lactobacillus sakei subsp. sakei 23K phosphoesterase YP_395042.1 437662 D 314315 CDS YP_395043.1 81428044 3778256 438277..439656 1 NC_007576.1 nucleotide phosphoesterase 439656 3778256 LSA0430 Lactobacillus sakei subsp. sakei 23K nucleotide phosphoesterase YP_395043.1 438277 D 314315 CDS YP_395044.1 81428045 3778257 439675..440292 1 NC_007576.1 hypothetical protein 440292 3778257 LSA0431 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395044.1 439675 D 314315 CDS YP_395045.1 81428046 3778258 440301..441086 1 NC_007576.1 HAD family sugar phosphatase 441086 3778258 LSA0432 Lactobacillus sakei subsp. sakei 23K HAD family sugar phosphatase YP_395045.1 440301 D 314315 CDS YP_395046.1 81428047 3778098 441074..441715 1 NC_007576.1 hypothetical protein 441715 3778098 LSA0433 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395046.1 441074 D 314315 CDS YP_395047.1 81428048 3778099 441802..442455 1 NC_007576.1 hypothetical protein 442455 3778099 LSA0434 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395047.1 441802 D 314315 CDS YP_395048.1 81428049 3778100 complement(442510..443496) 1 NC_007576.1 thioredoxin reductase 443496 trxB1 3778100 trxB1 Lactobacillus sakei subsp. sakei 23K thioredoxin reductase YP_395048.1 442510 R 314315 CDS YP_395049.1 81428050 3778101 443641..444225 1 NC_007576.1 peptidylprolyl isomerase (peptidylprolyl cis-trans isomerase) (PPIase) 444225 3778101 LSA0436 Lactobacillus sakei subsp. sakei 23K peptidylprolyl isomerase (peptidylprolyl cis-trans isomerase) (PPIase) YP_395049.1 443641 D 314315 CDS YP_395050.1 81428051 3778102 444373..444750 1 NC_007576.1 hypothetical protein 444750 3778102 LSA0437 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395050.1 444373 D 314315 CDS YP_395051.1 81428052 3778103 444751..445137 1 NC_007576.1 hypothetical protein 445137 3778103 LSA0438 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395051.1 444751 D 314315 CDS YP_395052.1 81428053 3778104 453089..453937 1 NC_007576.1 extracellular lipase/esterase 453937 3778104 LSA0439 Lactobacillus sakei subsp. sakei 23K extracellular lipase/esterase YP_395052.1 453089 D 314315 CDS YP_395053.1 81428054 3778105 complement(453963..454883) 1 NC_007576.1 malolactic fermentation transcriptional regulator 454883 mleR 3778105 mleR Lactobacillus sakei subsp. sakei 23K malolactic fermentation transcriptional regulator YP_395053.1 453963 R 314315 CDS YP_395054.1 81428055 3777999 455015..456646 1 NC_007576.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 456646 mleS 3777999 mleS Lactobacillus sakei subsp. sakei 23K malate dehydrogenase YP_395054.1 455015 D 314315 CDS YP_395055.1 81428056 3778000 456681..457643 1 NC_007576.1 L-malate uniport protein 457643 mleP1 3778000 mleP1 Lactobacillus sakei subsp. sakei 23K L-malate uniport protein YP_395055.1 456681 D 314315 CDS YP_395056.1 81428057 3778001 457790..458158 1 NC_007576.1 single-stranded mRNA endoribonuclease 458158 3778001 LSA0443 Lactobacillus sakei subsp. sakei 23K single-stranded mRNA endoribonuclease YP_395056.1 457790 D 314315 CDS YP_395057.1 81428058 3778002 458181..459086 1 NC_007576.1 malate dehydrogenase 459086 3778002 LSA0444 Lactobacillus sakei subsp. sakei 23K malate dehydrogenase YP_395057.1 458181 D 314315 CDS YP_395058.1 81428059 3778003 complement(459132..460079) 1 NC_007576.1 L-malate uniport protein 460079 mleP2 3778003 mleP2 Lactobacillus sakei subsp. sakei 23K L-malate uniport protein YP_395058.1 459132 R 314315 CDS YP_395059.1 81428060 3778004 460281..461222 1 NC_007576.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; subclass 1A is a dimer formed by two identical PyrD subunits each containing an FMN group; dihydroorotate dehydrogenase 1A 461222 3778004 LSA0446 Lactobacillus sakei subsp. sakei 23K dihydroorotate dehydrogenase 1A YP_395059.1 460281 D 314315 CDS YP_395060.1 81428061 3778005 461228..461926 1 NC_007576.1 haloacid dehalogenase 461926 3778005 LSA0447 Lactobacillus sakei subsp. sakei 23K haloacid dehalogenase YP_395060.1 461228 D 314315 CDS YP_395061.1 81428062 3778006 461983..463263 1 NC_007576.1 glutamate/aspartate:cation symporter 463263 gltP 3778006 gltP Lactobacillus sakei subsp. sakei 23K glutamate/aspartate:cation symporter YP_395061.1 461983 D 314315 CDS YP_395062.1 81428063 3778007 463668..464645 1 NC_007576.1 mannose-specific phosphotransferase system, enzyme IIAB 464645 manL 3778007 manL Lactobacillus sakei subsp. sakei 23K mannose-specific phosphotransferase system, enzyme IIAB YP_395062.1 463668 D 314315 CDS YP_395063.1 81428064 3777935 464680..465486 1 NC_007576.1 mannose-specific phosphotransferase system, enzyme IIC 465486 manM 3777935 manM Lactobacillus sakei subsp. sakei 23K mannose-specific phosphotransferase system, enzyme IIC YP_395063.1 464680 D 314315 CDS YP_395064.1 81428065 3777936 465505..466416 1 NC_007576.1 mannose-specific phosphotransferase system, enzyme IID 466416 manN 3777936 manN Lactobacillus sakei subsp. sakei 23K mannose-specific phosphotransferase system, enzyme IID YP_395064.1 465505 D 314315 CDS YP_395065.1 81428066 3777937 466759..467127 1 NC_007576.1 hypothetical protein 467127 3777937 LSA0452 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395065.1 466759 D 314315 CDS YP_395066.1 81428067 3777938 467279..467503 1 NC_007576.1 hypothetical protein 467503 3777938 LSA0453 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395066.1 467279 D 314315 CDS YP_395067.1 81428068 3777939 467503..468243 1 NC_007576.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 468243 fabG 3777939 fabG Lactobacillus sakei subsp. sakei 23K 3-ketoacyl-ACP reductase YP_395067.1 467503 D 314315 CDS YP_395068.1 81428069 3777940 468264..468497 1 NC_007576.1 hypothetical protein 468497 3777940 LSA0455 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395068.1 468264 D 314315 CDS YP_395069.1 81428070 3777941 468490..470013 1 NC_007576.1 hypothetical protein 470013 3777941 LSA0456 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395069.1 468490 D 314315 CDS YP_395070.1 81428071 3777942 470050..470895 1 NC_007576.1 transporter 470895 3777942 LSA0457 Lactobacillus sakei subsp. sakei 23K transporter YP_395070.1 470050 D 314315 CDS YP_395071.1 81428072 3777894 470895..471260 1 NC_007576.1 hypothetical protein 471260 3777894 LSA0458 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395071.1 470895 D 314315 CDS YP_395072.1 81428073 3777895 complement(471324..471755) 1 NC_007576.1 hypothetical protein 471755 3777895 LSA0459 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395072.1 471324 R 314315 CDS YP_395073.1 81428074 3777896 471893..471985 1 NC_007576.1 hypothetical protein 471985 3777896 LSA0460 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395073.1 471893 D 314315 CDS YP_395074.1 81428075 3777897 472169..473371 1 NC_007576.1 group 1 glycosyl transferase 473371 3777897 LSA0461 Lactobacillus sakei subsp. sakei 23K group 1 glycosyl transferase YP_395074.1 472169 D 314315 CDS YP_395075.1 81428076 3777898 473449..474465 1 NC_007576.1 hypothetical protein 474465 3777898 LSA0462 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395075.1 473449 D 314315 CDS YP_395076.1 81428077 3777899 474478..475356 1 NC_007576.1 2-hydroxyacid dehydrogenase 475356 3777899 LSA0463 Lactobacillus sakei subsp. sakei 23K 2-hydroxyacid dehydrogenase YP_395076.1 474478 D 314315 CDS YP_395077.1 81428078 3777900 475428..475661 1 NC_007576.1 hypothetical protein 475661 3777900 LSA0464 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395077.1 475428 D 314315 CDS YP_395078.1 81428079 3777901 475882..477939 1 NC_007576.1 phosphoglycerol transferase 477939 3777901 LSA0465 Lactobacillus sakei subsp. sakei 23K phosphoglycerol transferase YP_395078.1 475882 D 314315 CDS YP_395079.1 81428080 3777665 478089..478523 1 NC_007576.1 FUR family transcriptional regulator 478523 3777665 LSA0466 Lactobacillus sakei subsp. sakei 23K FUR family transcriptional regulator YP_395079.1 478089 D 314315 CDS YP_395080.1 81428081 3777666 complement(484357..484980) 1 NC_007576.1 hypothetical protein 484980 3777666 LSA0467 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395080.1 484357 R 314315 CDS YP_395081.1 81428082 3777667 485247..486446 1 NC_007576.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 486446 metK 3777667 metK Lactobacillus sakei subsp. sakei 23K S-adenosylmethionine synthetase YP_395081.1 485247 D 314315 CDS YP_395082.1 81428083 3777668 486541..488001 1 NC_007576.1 drug:H(+) antiporter 488001 3777668 LSA0469 Lactobacillus sakei subsp. sakei 23K drug:H(+) antiporter YP_395082.1 486541 D 314315 CDS YP_395083.1 81428084 3777669 complement(488035..489060) 1 NC_007576.1 hypothetical protein 489060 3777669 LSA0470 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395083.1 488035 R 314315 CDS YP_395084.1 81428085 3777670 489206..489598 1 NC_007576.1 glucitol/sorbitol phosphotransferase system, enzyme IIA 489598 3777670 LSA0471 Lactobacillus sakei subsp. sakei 23K glucitol/sorbitol phosphotransferase system, enzyme IIA YP_395084.1 489206 D 314315 CDS YP_395085.1 81428086 3777671 489614..490753 1 NC_007576.1 transporter 490753 3777671 LSA0472 Lactobacillus sakei subsp. sakei 23K transporter YP_395085.1 489614 D 314315 CDS YP_395086.1 81428087 3777672 491057..491374 1 NC_007576.1 IS150 family transposase 491374 tnpA2-ISLsa2 3777672 tnpA2-ISLsa2 Lactobacillus sakei subsp. sakei 23K IS150 family transposase YP_395086.1 491057 D 314315 CDS YP_395087.1 81428088 3777649 491416..492228 1 NC_007576.1 IS150 family transposase 492228 tnpB2-ISLsa2 3777649 tnpB2-ISLsa2 Lactobacillus sakei subsp. sakei 23K IS150 family transposase YP_395087.1 491416 D 314315 CDS YP_395088.1 81428089 3777650 complement(492343..492780) 1 NC_007576.1 GNAT family acetyltransferase 492780 3777650 LSA0475 Lactobacillus sakei subsp. sakei 23K GNAT family acetyltransferase YP_395088.1 492343 R 314315 CDS YP_395089.1 81428090 3777651 complement(492944..493921) 1 NC_007576.1 guanosine 5'-monophosphate oxidoreductase 493921 guaC 3777651 guaC Lactobacillus sakei subsp. sakei 23K guanosine 5'-monophosphate oxidoreductase YP_395089.1 492944 R 314315 CDS YP_395090.1 81428091 3777652 complement(494068..495021) 1 NC_007576.1 ion Mg(2+)/Co(2+) transport protein 495021 3777652 LSA0477 Lactobacillus sakei subsp. sakei 23K ion Mg(2+)/Co(2+) transport protein YP_395090.1 494068 R 314315 CDS YP_395091.1 81428092 3777653 495110..495946 1 NC_007576.1 rRNA large subunit methyltransferase A 495946 3777653 LSA0478 Lactobacillus sakei subsp. sakei 23K rRNA large subunit methyltransferase A YP_395091.1 495110 D 314315 CDS YP_395092.1 81428093 3777654 496199..496708 1 NC_007576.1 rRNA methyltransferase 496708 3777654 LSA0479 Lactobacillus sakei subsp. sakei 23K rRNA methyltransferase YP_395092.1 496199 D 314315 CDS YP_395093.1 81428094 3777655 496720..497127 1 NC_007576.1 hypothetical protein 497127 3777655 LSA0480 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395093.1 496720 D 314315 CDS YP_395094.1 81428095 3777656 497267..499636 1 NC_007576.1 DNA translocase FtsK 499636 ftsK 3777656 ftsK Lactobacillus sakei subsp. sakei 23K DNA translocase FtsK YP_395094.1 497267 D 314315 CDS YP_395095.1 81428096 3777017 499834..501105 1 NC_007576.1 hypothetical protein 501105 3777017 LSA0482 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395095.1 499834 D 314315 CDS YP_395096.1 81428097 3777018 501095..502399 1 NC_007576.1 hypothetical protein 502399 3777018 LSA0483 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395096.1 501095 D 314315 CDS YP_395097.1 81428098 3777019 502399..503130 1 NC_007576.1 oxidoreductase 503130 3777019 LSA0484 Lactobacillus sakei subsp. sakei 23K oxidoreductase YP_395097.1 502399 D 314315 CDS YP_395098.1 81428099 3777020 503212..504135 1 NC_007576.1 hypothetical protein 504135 3777020 LSA0485 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395098.1 503212 D 314315 CDS YP_395099.1 81428100 3777021 504161..504745 1 NC_007576.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 504745 pgsA 3777021 pgsA Lactobacillus sakei subsp. sakei 23K CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_395099.1 504161 D 314315 CDS YP_395100.1 81428101 3777022 504928..505995 1 NC_007576.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 505995 recA 3777022 recA Lactobacillus sakei subsp. sakei 23K recombinase A YP_395100.1 504928 D 314315 CDS YP_395101.1 81428102 3777023 506382..507947 1 NC_007576.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 507947 3777023 LSA0489 Lactobacillus sakei subsp. sakei 23K phosphodiesterase YP_395101.1 506382 D 314315 CDS YP_395102.1 81428103 3777024 508094..509191 1 NC_007576.1 -phosphate N-acetyl-glucosaminyl transferase 509191 tagO 3777024 tagO Lactobacillus sakei subsp. sakei 23K -phosphate N-acetyl-glucosaminyl transferase YP_395102.1 508094 D 314315 CDS YP_395103.1 81428104 3777533 complement(509218..509883) 1 NC_007576.1 hypothetical protein 509883 3777533 LSA0491 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395103.1 509218 R 314315 CDS YP_395104.1 81428105 3777534 509945..511282 1 NC_007576.1 type II secretion/competence system, ATP-dependent DNA helicase ComFA-like 511282 3777534 LSA0492 Lactobacillus sakei subsp. sakei 23K type II secretion/competence system, ATP-dependent DNA helicase ComFA-like YP_395104.1 509945 D 314315 CDS YP_395105.1 81428106 3777535 511282..511953 1 NC_007576.1 type II secretion/competence system protein ComFC-like protein 511953 3777535 LSA0493 Lactobacillus sakei subsp. sakei 23K type II secretion/competence system protein ComFC-like protein YP_395105.1 511282 D 314315 CDS YP_395106.1 81428107 3777536 512080..512625 1 NC_007576.1 30S ribosomal interface protein S30EA 512625 3777536 LSA0494 Lactobacillus sakei subsp. sakei 23K 30S ribosomal interface protein S30EA YP_395106.1 512080 D 314315 CDS YP_395107.1 81428108 3777537 512874..515237 1 NC_007576.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 515237 secA 3777537 secA Lactobacillus sakei subsp. sakei 23K preprotein translocase subunit SecA YP_395107.1 512874 D 314315 CDS YP_395108.1 81428109 3777538 515425..516423 1 NC_007576.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 516423 prfB 3777538 prfB Lactobacillus sakei subsp. sakei 23K peptide chain release factor 2 YP_395108.1 515425 D 314315 CDS YP_395109.1 81428110 3777539 516554..517240 1 NC_007576.1 cell-division associated ABC transporter ATP binding FtsE subunit 517240 ftsE 3777539 ftsE Lactobacillus sakei subsp. sakei 23K cell-division associated ABC transporter ATP binding FtsE subunit YP_395109.1 516554 D 314315 CDS YP_395110.1 81428111 3777540 517206..518117 1 NC_007576.1 cell-division associated ABC transporter, membrane FtsX subunit 518117 ftsX 3777540 ftsX Lactobacillus sakei subsp. sakei 23K cell-division associated ABC transporter, membrane FtsX subunit YP_395110.1 517206 D 314315 CDS YP_395111.1 81428112 3777507 518311..519444 1 NC_007576.1 hypothetical protein 519444 3777507 LSA0499 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395111.1 518311 D 314315 CDS YP_395112.1 81428113 3777508 519464..520177 1 NC_007576.1 two-component response regulator transcriptional regulator 520177 3777508 LSA0500 Lactobacillus sakei subsp. sakei 23K two-component response regulator transcriptional regulator YP_395112.1 519464 D 314315 CDS YP_395113.1 81428114 3777509 520164..521825 1 NC_007576.1 two-component sensor histidine kinase transcriptional regulator 521825 3777509 LSA0501 Lactobacillus sakei subsp. sakei 23K two-component sensor histidine kinase transcriptional regulator YP_395113.1 520164 D 314315 CDS YP_395114.1 81428115 3777510 521918..522778 1 NC_007576.1 phosphate ABC transporter substrate-binding protein 522778 pstS 3777510 pstS Lactobacillus sakei subsp. sakei 23K phosphate ABC transporter substrate-binding protein YP_395114.1 521918 D 314315 CDS YP_395115.1 81428116 3777511 522788..523711 1 NC_007576.1 phosphate ABC transporter transmembrane protein 523711 pstC 3777511 pstC Lactobacillus sakei subsp. sakei 23K phosphate ABC transporter transmembrane protein YP_395115.1 522788 D 314315 CDS YP_395116.1 81428117 3777512 523711..524595 1 NC_007576.1 phosphate ABC transporter transmembrane protein 524595 ptsA 3777512 ptsA Lactobacillus sakei subsp. sakei 23K phosphate ABC transporter transmembrane protein YP_395116.1 523711 D 314315 CDS YP_395117.1 81428118 3777513 524605..525414 1 NC_007576.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 525414 pstB1 3777513 pstB1 Lactobacillus sakei subsp. sakei 23K phosphate transporter ATP-binding protein YP_395117.1 524605 D 314315 CDS YP_395118.1 81428119 3777514 525435..526193 1 NC_007576.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 526193 pstB2 3777514 pstB2 Lactobacillus sakei subsp. sakei 23K phosphate ABC transporter ATP-binding protein YP_395118.1 525435 D 314315 CDS YP_395119.1 81428120 3777515 526210..526887 1 NC_007576.1 phosphate transporter PhoU 526887 3777515 LSA0507 Lactobacillus sakei subsp. sakei 23K phosphate transporter PhoU YP_395119.1 526210 D 314315 CDS YP_395120.1 81428121 3777499 527101..527571 1 NC_007576.1 nucleoside deoxyribosyltransferase 527571 3777499 LSA0508 Lactobacillus sakei subsp. sakei 23K nucleoside deoxyribosyltransferase YP_395120.1 527101 D 314315 CDS YP_395121.1 81428122 3777500 527761..528948 1 NC_007576.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate CoA ligase 528948 kbl 3777500 kbl Lactobacillus sakei subsp. sakei 23K 2-amino-3-ketobutyrate CoA ligase YP_395121.1 527761 D 314315 CDS YP_395122.1 81428123 3777501 528968..529231 1 NC_007576.1 L-threonine dehydrogenase (N-terminal fragment), authentic frameshift 529231 3777501 LSA0510 Lactobacillus sakei subsp. sakei 23K L-threonine dehydrogenase (N-terminal fragment), authentic frameshift YP_395122.1 528968 D 314315 CDS YP_395123.1 81428124 3777502 529250..529915 1 NC_007576.1 L-threonine dehydrogenase (C-terminal fragment), authentic frameshift 529915 3777502 LSA0511 Lactobacillus sakei subsp. sakei 23K L-threonine dehydrogenase (C-terminal fragment), authentic frameshift YP_395123.1 529250 D 314315 CDS YP_395124.1 81428125 3777503 530102..531577 1 NC_007576.1 hypothetical protein 531577 3777503 LSA0512 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395124.1 530102 D 314315 CDS YP_395125.1 81428126 3777504 531605..531841 1 NC_007576.1 stress-responsive transcriptional regulator 531841 3777504 LSA0513 Lactobacillus sakei subsp. sakei 23K stress-responsive transcriptional regulator YP_395125.1 531605 D 314315 CDS YP_395126.1 81428127 3777505 531841..532113 1 NC_007576.1 small extracellular protein 532113 3777505 LSA0514 Lactobacillus sakei subsp. sakei 23K small extracellular protein YP_395126.1 531841 D 314315 CDS YP_395127.1 81428128 3777506 532113..532487 1 NC_007576.1 hypothetical protein 532487 3777506 LSA0515 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395127.1 532113 D 314315 CDS YP_395128.1 81428129 3777450 532625..533566 1 NC_007576.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 533566 hprK 3777450 hprK Lactobacillus sakei subsp. sakei 23K HPr kinase/phosphorylase YP_395128.1 532625 D 314315 CDS YP_395129.1 81428130 3777451 533685..534521 1 NC_007576.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 534521 lgt 3777451 lgt Lactobacillus sakei subsp. sakei 23K prolipoprotein diacylglyceryl transferase YP_395129.1 533685 D 314315 CDS YP_395130.1 81428131 3777452 534539..535561 1 NC_007576.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 535561 gpsA 3777452 gpsA Lactobacillus sakei subsp. sakei 23K NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_395130.1 534539 D 314315 CDS YP_395131.1 81428132 3777453 535680..536081 1 NC_007576.1 hypothetical protein 536081 3777453 LSA0519 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395131.1 535680 D 314315 CDS YP_395132.1 81428133 3777454 536198..537118 1 NC_007576.1 thioredoxin reductase 537118 trxB2 3777454 trxB2 Lactobacillus sakei subsp. sakei 23K thioredoxin reductase YP_395132.1 536198 D 314315 CDS YP_395133.1 81428134 3777455 537274..538998 1 NC_007576.1 phosphoglucomutase 538998 pgm 3777455 pgm Lactobacillus sakei subsp. sakei 23K phosphoglucomutase YP_395133.1 537274 D 314315 CDS YP_395134.1 81428135 3777456 539123..539755 1 NC_007576.1 hypothetical protein 539755 3777456 LSA0522 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395134.1 539123 D 314315 CDS YP_395135.1 81428136 3777457 539963..541966 1 NC_007576.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 541966 uvrB 3777457 uvrB Lactobacillus sakei subsp. sakei 23K excinuclease ABC subunit B YP_395135.1 539963 D 314315 CDS YP_395136.1 81428137 3777418 541976..544828 1 NC_007576.1 excinuclease ABC subunit A 544828 uvrA1 3777418 uvrA1 Lactobacillus sakei subsp. sakei 23K excinuclease ABC subunit A YP_395136.1 541976 D 314315 CDS YP_395137.1 81428138 3777419 544950..545486 1 NC_007576.1 hypothetical protein 545486 3777419 LSA0525 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395137.1 544950 D 314315 CDS YP_395138.1 81428139 3777420 545612..546496 1 NC_007576.1 hypothetical protein 546496 3777420 LSA0526 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395138.1 545612 D 314315 CDS YP_395139.1 81428140 3777421 546493..547527 1 NC_007576.1 extracellular lipase/esterase 547527 3777421 LSA0527 Lactobacillus sakei subsp. sakei 23K extracellular lipase/esterase YP_395139.1 546493 D 314315 CDS YP_395140.1 81428141 3777422 547530..548474 1 NC_007576.1 hypothetical protein 548474 3777422 LSA0528 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395140.1 547530 D 314315 CDS YP_395141.1 81428142 3777423 548567..549022 1 NC_007576.1 MarR family transcriptional regulator 549022 3777423 LSA0529 Lactobacillus sakei subsp. sakei 23K MarR family transcriptional regulator YP_395141.1 548567 D 314315 CDS YP_395142.1 81428143 3777424 complement(549136..549660) 1 NC_007576.1 hypothetical protein 549660 3777424 LSA0530 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395142.1 549136 R 314315 CDS YP_395143.1 81428144 3777425 complement(549884..550468) 1 NC_007576.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 550468 clpP 3777425 clpP Lactobacillus sakei subsp. sakei 23K ATP-dependent Clp protease proteolytic subunit YP_395143.1 549884 R 314315 CDS YP_395144.1 81428145 3777288 complement(551011..551592) 1 NC_007576.1 N-acetylmuramoyl-L-alanine amidase 551592 3777288 LSA0532 Lactobacillus sakei subsp. sakei 23K N-acetylmuramoyl-L-alanine amidase YP_395144.1 551011 R 314315 CDS YP_395145.1 81428146 3777289 551808..552767 1 NC_007576.1 inosine-uridine preferring nucleoside hydrolase 552767 iunH2 3777289 iunH2 Lactobacillus sakei subsp. sakei 23K inosine-uridine preferring nucleoside hydrolase YP_395145.1 551808 D 314315 CDS YP_395146.1 81428147 3777290 552959..558922 1 NC_007576.1 hypothetical protein 558922 3777290 LSA0534 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395146.1 552959 D 314315 CDS YP_395148.1 81428148 3777291 559648..560292 1 NC_007576.1 hypothetical protein 560292 3777291 LSA0536 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395148.1 559648 D 314315 CDS YP_395149.1 81428149 3777292 560392..560772 1 NC_007576.1 hypothetical protein 560772 3777292 LSA0537 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395149.1 560392 D 314315 CDS YP_395150.1 81428150 3777293 560936..561682 1 NC_007576.1 oxidoreductase 561682 3777293 LSA0538 Lactobacillus sakei subsp. sakei 23K oxidoreductase YP_395150.1 560936 D 314315 CDS YP_395151.1 81428151 3777294 561810..562055 1 NC_007576.1 NADPH-quinone oxidoreductase (N-terminal fragment), authentic frameshift 562055 3777294 LSA0539 Lactobacillus sakei subsp. sakei 23K NADPH-quinone oxidoreductase (N-terminal fragment), authentic frameshift YP_395151.1 561810 D 314315 CDS YP_395152.1 81428152 3777295 562052..562711 1 NC_007576.1 NADPH-quinone oxidoreductase (C-terminal fragment), authentic frameshift 562711 3777295 LSA0540 Lactobacillus sakei subsp. sakei 23K NADPH-quinone oxidoreductase (C-terminal fragment), authentic frameshift YP_395152.1 562052 D 314315 CDS YP_395153.1 81428153 3777280 complement(562708..563562) 1 NC_007576.1 XRE family transcriptional regulator 563562 3777280 LSA0541 Lactobacillus sakei subsp. sakei 23K XRE family transcriptional regulator YP_395153.1 562708 R 314315 CDS YP_395154.1 81428154 3777281 complement(563678..564796) 1 NC_007576.1 aryl-alcohol dehydrogenase 564796 3777281 LSA0542 Lactobacillus sakei subsp. sakei 23K aryl-alcohol dehydrogenase YP_395154.1 563678 R 314315 CDS YP_395155.1 81428155 3777282 complement(564907..565548) 1 NC_007576.1 3-methy-adenine DNA glycosylase I 565548 3777282 LSA0543 Lactobacillus sakei subsp. sakei 23K 3-methy-adenine DNA glycosylase I YP_395155.1 564907 R 314315 CDS YP_395156.1 81428156 3777283 565687..566559 1 NC_007576.1 drug ABC exporter, ATP-binding subunit 566559 3777283 LSA0544 Lactobacillus sakei subsp. sakei 23K drug ABC exporter, ATP-binding subunit YP_395156.1 565687 D 314315 CDS YP_395157.1 81428157 3777284 566563..567306 1 NC_007576.1 drug ABC exporter, membrane-spanning subunit 567306 3777284 LSA0545 Lactobacillus sakei subsp. sakei 23K drug ABC exporter, membrane-spanning subunit YP_395157.1 566563 D 314315 CDS YP_395158.1 81428158 3777285 567306..567506 1 NC_007576.1 hypothetical protein 567506 3777285 LSA0546 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395158.1 567306 D 314315 CDS YP_395159.1 81428159 3777286 567519..567800 1 NC_007576.1 two-component system, sensor histidine kinase (N-terminal fragment), authentic frameshift 567800 3777286 LSA0547 Lactobacillus sakei subsp. sakei 23K two-component system, sensor histidine kinase (N-terminal fragment), authentic frameshift YP_395159.1 567519 D 314315 CDS YP_395160.1 81428160 3777287 567710..568429 1 NC_007576.1 two-component system, sensor histidine kinase (C-terminal fragment), authentic frameshift 568429 3777287 LSA0548 Lactobacillus sakei subsp. sakei 23K two-component system, sensor histidine kinase (C-terminal fragment), authentic frameshift YP_395160.1 567710 D 314315 CDS YP_395161.1 81428161 3777232 568422..569027 1 NC_007576.1 two-component system response regulator 569027 3777232 LSA0549 Lactobacillus sakei subsp. sakei 23K two-component system response regulator YP_395161.1 568422 D 314315 CDS YP_395162.1 81428162 3777233 569097..569423 1 NC_007576.1 hypothetical protein 569423 3777233 LSA0550 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395162.1 569097 D 314315 CDS YP_395163.1 81428163 3777234 569547..571187 1 NC_007576.1 oligopeptide ABC transporter substrate-binding lipoprotein 571187 3777234 LSA0551 Lactobacillus sakei subsp. sakei 23K oligopeptide ABC transporter substrate-binding lipoprotein YP_395163.1 569547 D 314315 CDS YP_395164.1 81428164 3777235 571267..571674 1 NC_007576.1 organic hydroperoxide resistance protein 571674 3777235 LSA0552 Lactobacillus sakei subsp. sakei 23K organic hydroperoxide resistance protein YP_395164.1 571267 D 314315 CDS YP_395165.1 81428165 3777236 complement(571740..572036) 1 NC_007576.1 hypothetical protein 572036 3777236 LSA0553 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395165.1 571740 R 314315 CDS YP_395166.1 81428166 3777237 572242..572604 1 NC_007576.1 hypothetical protein 572604 3777237 LSA0555 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395166.1 572242 D 314315 CDS YP_395167.1 81428167 3777238 572733..573623 1 NC_007576.1 drug ABC exporter, ATP-binding subunit 573623 3777238 LSA0556 Lactobacillus sakei subsp. sakei 23K drug ABC exporter, ATP-binding subunit YP_395167.1 572733 D 314315 CDS YP_395168.1 81428168 3777239 573623..574489 1 NC_007576.1 drug ABC exporter, membrane-spanning subunit 574489 3777239 LSA0557 Lactobacillus sakei subsp. sakei 23K drug ABC exporter, membrane-spanning subunit YP_395168.1 573623 D 314315 CDS YP_395169.1 81428169 3776857 574516..574968 1 NC_007576.1 LytR family transcriptional regulator 574968 3776857 LSA0558 Lactobacillus sakei subsp. sakei 23K LytR family transcriptional regulator YP_395169.1 574516 D 314315 CDS YP_395170.1 81428170 3776858 574974..575381 1 NC_007576.1 hypothetical protein 575381 3776858 LSA0559 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395170.1 574974 D 314315 CDS YP_395171.1 81428171 3776859 complement(575441..575788) 1 NC_007576.1 bacteriocin immunity protein 575788 3776859 LSA0560_a Lactobacillus sakei subsp. sakei 23K bacteriocin immunity protein YP_395171.1 575441 R 314315 CDS YP_395172.1 81428172 3776860 575965..576099 1 NC_007576.1 bacteriocin inducing peptide 576099 3776860 LSA0560_b Lactobacillus sakei subsp. sakei 23K bacteriocin inducing peptide YP_395172.1 575965 D 314315 CDS YP_395173.1 81428173 3776861 576747..576956 1 NC_007576.1 two-component system, sensor histidine kinase, (SppK fragment) (sakacine P production), degenerate 576956 sppKN 3776861 sppKN Lactobacillus sakei subsp. sakei 23K two-component system, sensor histidine kinase, (SppK fragment) (sakacine P production), degenerate YP_395173.1 576747 D 314315 CDS YP_395174.1 81428174 3776862 576893..577444 1 NC_007576.1 two-component system, sensor histidine kinase (SppK fragment) (sakacine pproduction ), degenerate 577444 sppKC 3776862 sppKC Lactobacillus sakei subsp. sakei 23K two-component system, sensor histidine kinase (SppK fragment) (sakacine pproduction ), degenerate YP_395174.1 576893 D 314315 CDS YP_395175.1 81428175 3776863 577446..578192 1 NC_007576.1 two-component system, response regulator SppR (sakacin P production) 578192 sppR 3776863 sppR Lactobacillus sakei subsp. sakei 23K two-component system, response regulator SppR (sakacin P production) YP_395175.1 577446 D 314315 CDS YP_395176.1 81428176 3776864 578358..578501 1 NC_007576.1 hypothetical protein 578501 3776864 LSA0564_a Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395176.1 578358 D 314315 CDS YP_395177.1 81428177 3776865 578523..578687 1 NC_007576.1 hypothetical protein 578687 3776865 LSA0564_b Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395177.1 578523 D 314315 CDS YP_395178.1 81428178 3776866 578713..579381 1 NC_007576.1 bacteriocin immunity protein 579381 3776866 LSA0564_c Lactobacillus sakei subsp. sakei 23K bacteriocin immunity protein YP_395178.1 578713 D 314315 CDS YP_395179.1 81428179 3776867 580228..580398 1 NC_007576.1 hypothetical protein 580398 3776867 LSA0565 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395179.1 580228 D 314315 CDS YP_395180.1 81428180 3776868 580431..580613 1 NC_007576.1 hypothetical protein 580613 3776868 LSA0566 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395180.1 580431 D 314315 CDS YP_395181.1 81428181 3776869 580755..581087 1 NC_007576.1 hypothetical protein 581087 3776869 LSA0567 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395181.1 580755 D 314315 CDS YP_395182.1 81428182 3776870 581106..581393 1 NC_007576.1 SakacinP immunity protein, SpiA 581393 3776870 LSA0568 Lactobacillus sakei subsp. sakei 23K SakacinP immunity protein, SpiA YP_395182.1 581106 D 314315 CDS YP_395183.1 81428183 3776871 581417..581596 1 NC_007576.1 hypothetical protein 581596 3776871 LSA0569_a Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395183.1 581417 D 314315 CDS YP_395184.1 81428184 3776872 581625..581861 1 NC_007576.1 hypothetical protein 581861 3776872 LSA0569_b Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395184.1 581625 D 314315 CDS YP_395185.1 81428185 3776873 complement(581934..582257) 1 NC_007576.1 hypothetical protein 582257 3776873 LSA0570 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395185.1 581934 R 314315 CDS YP_395186.1 81428186 3776874 582341..582625 1 NC_007576.1 hypothetical protein 582625 3776874 LSA0571 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395186.1 582341 D 314315 CDS YP_395187.1 81428187 3776875 582795..583835 1 NC_007576.1 catalyzes the formation of 2-oxobutanoate from L-threonine; catabolic; threonine dehydratase 583835 tdcB 3776875 tdcB Lactobacillus sakei subsp. sakei 23K threonine dehydratase YP_395187.1 582795 D 314315 CDS YP_395188.1 81428188 3776876 583979..584611 1 NC_007576.1 hypothetical protein 584611 3776876 LSA0573 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395188.1 583979 D 314315 CDS YP_395189.1 81428189 3776877 complement(584598..585035) 1 NC_007576.1 hypothetical protein 585035 3776877 LSA0574 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395189.1 584598 R 314315 CDS YP_395190.1 81428190 3776878 585192..586544 1 NC_007576.1 NADH peroxidase 586544 npr 3776878 npr Lactobacillus sakei subsp. sakei 23K NADH peroxidase YP_395190.1 585192 D 314315 CDS YP_395191.1 81428191 3776879 586703..586945 1 NC_007576.1 hypothetical protein 586945 3776879 LSA0576 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395191.1 586703 D 314315 CDS YP_395192.1 81428192 3776880 586954..587193 1 NC_007576.1 hypothetical protein 587193 3776880 LSA0577 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395192.1 586954 D 314315 CDS YP_395193.1 81428193 3776881 complement(587234..587959) 1 NC_007576.1 hypothetical protein 587959 3776881 LSA0578 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395193.1 587234 R 314315 CDS YP_395194.1 81428194 3776940 588084..588956 1 NC_007576.1 LysR family transcriptional regulator 588956 3776940 LSA0579 Lactobacillus sakei subsp. sakei 23K LysR family transcriptional regulator YP_395194.1 588084 D 314315 CDS YP_395195.1 81428195 3776941 589064..590539 1 NC_007576.1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 590539 ubiD 3776941 ubiD Lactobacillus sakei subsp. sakei 23K 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_395195.1 589064 D 314315 CDS YP_395196.1 81428196 3776942 590561..591151 1 NC_007576.1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 591151 ubiX 3776942 ubiX Lactobacillus sakei subsp. sakei 23K 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_395196.1 590561 D 314315 CDS YP_395197.1 81428197 3776943 591129..591554 1 NC_007576.1 hypothetical protein 591554 3776943 LSA0582 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395197.1 591129 D 314315 CDS YP_395198.1 81428198 3776944 complement(591588..593369) 1 NC_007576.1 glycerophosphodiester phosphodiesterase 593369 glpQ 3776944 glpQ Lactobacillus sakei subsp. sakei 23K glycerophosphodiester phosphodiesterase YP_395198.1 591588 R 314315 CDS YP_395199.1 81428199 3776945 complement(593460..594866) 1 NC_007576.1 peptidase U34 594866 pepD4 3776945 pepD4 Lactobacillus sakei subsp. sakei 23K peptidase U34 YP_395199.1 593460 R 314315 CDS YP_395200.1 81428200 3776946 595035..595709 1 NC_007576.1 hypothetical protein 595709 3776946 LSA0585 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395200.1 595035 D 314315 CDS YP_395201.1 81428201 3776947 complement(595887..597044) 1 NC_007576.1 site-specific recombinase, prophage lsa1 integrase 597044 3776947 LSA0586 Lactobacillus sakei subsp. sakei 23K site-specific recombinase, prophage lsa1 integrase YP_395201.1 595887 R 314315 CDS YP_395202.1 81428202 3776948 complement(597105..597257) 1 NC_007576.1 prophage lsa1 protein 597257 3776948 LSA0587 Lactobacillus sakei subsp. sakei 23K prophage lsa1 protein YP_395202.1 597105 R 314315 CDS YP_395203.1 81428203 3776949 complement(597221..597478) 1 NC_007576.1 prophage lsa1 protein 597478 3776949 LSA0588 Lactobacillus sakei subsp. sakei 23K prophage lsa1 protein YP_395203.1 597221 R 314315 CDS YP_395204.1 81428204 3776950 complement(597576..598355) 1 NC_007576.1 XRE family transcriptional regulator 598355 3776950 LSA0589 Lactobacillus sakei subsp. sakei 23K XRE family transcriptional regulator YP_395204.1 597576 R 314315 CDS YP_395205.1 81428205 3776951 598496..598687 1 NC_007576.1 prophage lsa1 protein 598687 3776951 LSA0590 Lactobacillus sakei subsp. sakei 23K prophage lsa1 protein YP_395205.1 598496 D 314315 CDS YP_395206.1 81428206 3776952 598690..598962 1 NC_007576.1 prophage lsa1 protein 598962 3776952 LSA0591 Lactobacillus sakei subsp. sakei 23K prophage lsa1 protein YP_395206.1 598690 D 314315 CDS YP_395207.1 81428207 3776953 599053..599157 1 NC_007576.1 hypothetical protein 599157 3776953 LSA0592 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395207.1 599053 D 314315 CDS YP_395208.1 81428208 3776954 599319..599573 1 NC_007576.1 prophage lsa1 protein 599573 3776954 LSA0593 Lactobacillus sakei subsp. sakei 23K prophage lsa1 protein YP_395208.1 599319 D 314315 CDS YP_395209.1 81428209 3776955 599554..600354 1 NC_007576.1 hypothetical protein 600354 3776955 LSA0594 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395209.1 599554 D 314315 CDS YP_395210.1 81428210 3776956 600345..601838 1 NC_007576.1 prophage lsa1 DNA primase 601838 3776956 LSA0595 Lactobacillus sakei subsp. sakei 23K prophage lsa1 DNA primase YP_395210.1 600345 D 314315 CDS YP_395211.1 81428211 3776957 602118..602510 1 NC_007576.1 prophage lsa1 protein 602510 3776957 LSA0596 Lactobacillus sakei subsp. sakei 23K prophage lsa1 protein YP_395211.1 602118 D 314315 CDS YP_395212.1 81428212 3776958 602654..602959 1 NC_007576.1 prophage lsa1 protein 602959 3776958 LSA0597 Lactobacillus sakei subsp. sakei 23K prophage lsa1 protein YP_395212.1 602654 D 314315 CDS YP_395213.1 81428213 3776959 602967..603104 1 NC_007576.1 prophage lsa1 protein 603104 3776959 LSA0598 Lactobacillus sakei subsp. sakei 23K prophage lsa1 protein YP_395213.1 602967 D 314315 CDS YP_395214.1 81428214 3776960 603206..603628 1 NC_007576.1 prophage lsa1 protein 603628 3776960 LSA0599 Lactobacillus sakei subsp. sakei 23K prophage lsa1 protein YP_395214.1 603206 D 314315 CDS YP_395215.1 81428215 3776961 603696..604037 1 NC_007576.1 prophage lsa1 protein 604037 3776961 LSA0600 Lactobacillus sakei subsp. sakei 23K prophage lsa1 protein YP_395215.1 603696 D 314315 CDS YP_395216.1 81428216 3776962 complement(604618..604695) 1 NC_007576.1 prophage lsa1 protein 604695 3776962 LSA0601 Lactobacillus sakei subsp. sakei 23K prophage lsa1 protein YP_395216.1 604618 R 314315 CDS YP_395217.1 81428217 3776963 605222..605341 1 NC_007576.1 prophage lsa1 protein 605341 3776963 LSA0602 Lactobacillus sakei subsp. sakei 23K prophage lsa1 protein YP_395217.1 605222 D 314315 CDS YP_395218.1 81428218 3776981 605626..606663 1 NC_007576.1 glycolytic genes regulator 606663 cggR 3776981 cggR Lactobacillus sakei subsp. sakei 23K glycolytic genes regulator YP_395218.1 605626 D 314315 CDS YP_395219.1 81428219 3776982 606702..607718 1 NC_007576.1 glyceraldehyde 3-phosphate dehydrogenase 607718 gap 3776982 gap Lactobacillus sakei subsp. sakei 23K glyceraldehyde 3-phosphate dehydrogenase YP_395219.1 606702 D 314315 CDS YP_395220.1 81428220 3776983 607819..609033 1 NC_007576.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 609033 pgk 3776983 pgk Lactobacillus sakei subsp. sakei 23K phosphoglycerate kinase YP_395220.1 607819 D 314315 CDS YP_395221.1 81428221 3776984 609059..609814 1 NC_007576.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 609814 tpiA 3776984 tpiA Lactobacillus sakei subsp. sakei 23K triosephosphate isomerase YP_395221.1 609059 D 314315 CDS YP_395222.1 81428222 3776985 609932..611227 1 NC_007576.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 611227 eno 3776985 eno Lactobacillus sakei subsp. sakei 23K phosphopyruvate hydratase YP_395222.1 609932 D 314315 CDS YP_395223.1 81428223 3776986 611478..611744 1 NC_007576.1 lactoylglutathione lyase (N-terminal fragment), authentic frameshift 611744 gloAN 3776986 gloAN Lactobacillus sakei subsp. sakei 23K lactoylglutathione lyase (N-terminal fragment), authentic frameshift YP_395223.1 611478 D 314315 CDS YP_395224.1 81428224 3776987 611737..611856 1 NC_007576.1 lactoylglutathione lyase (C-terminal fragment), authentic frameshift 611856 gloAC 3776987 gloAC Lactobacillus sakei subsp. sakei 23K lactoylglutathione lyase (C-terminal fragment), authentic frameshift YP_395224.1 611737 D 314315 CDS YP_395225.1 81428225 3776988 complement(611904..612959) 1 NC_007576.1 cell surface protein 612959 3776988 LSA0610 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_395225.1 611904 R 314315 CDS YP_395226.1 81428226 3776990 complement(612977..613678) 1 NC_007576.1 cell surface protein 613678 3776990 LSA0611 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_395226.1 612977 R 314315 CDS YP_395227.1 81428227 3776991 complement(613659..614015) 1 NC_007576.1 hypothetical protein 614015 3776991 LSA0612 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395227.1 613659 R 314315 CDS YP_395228.1 81428228 3776992 complement(614037..615665) 1 NC_007576.1 cell surface protein 615665 3776992 LSA0613 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_395228.1 614037 R 314315 CDS YP_395229.1 81428229 3776993 complement(615619..616875) 1 NC_007576.1 hypothetical protein 616875 3776993 LSA0614 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395229.1 615619 R 314315 CDS YP_395230.1 81428230 3776994 617065..617535 1 NC_007576.1 ArgR family transcriptional regulator 617535 3776994 LSA0615 Lactobacillus sakei subsp. sakei 23K ArgR family transcriptional regulator YP_395230.1 617065 D 314315 CDS YP_395231.1 81428231 3776995 617807..618958 1 NC_007576.1 glycine/betaine/carnitine/choline ABC transporter ATP-binding subunit 618958 3776995 LSA0616 Lactobacillus sakei subsp. sakei 23K glycine/betaine/carnitine/choline ABC transporter ATP-binding subunit YP_395231.1 617807 D 314315 CDS YP_395232.1 81428232 3776996 618973..619599 1 NC_007576.1 glycine/betaine/carnitine/choline ABC transporter permease 619599 3776996 LSA0617 Lactobacillus sakei subsp. sakei 23K glycine/betaine/carnitine/choline ABC transporter permease YP_395232.1 618973 D 314315 CDS YP_395233.1 81428233 3776997 619611..620546 1 NC_007576.1 glycine/betaine/carnitine/choline ABC transporter substrate-binding lipoprotein 620546 3776997 LSA0618 Lactobacillus sakei subsp. sakei 23K glycine/betaine/carnitine/choline ABC transporter substrate-binding lipoprotein YP_395233.1 619611 D 314315 CDS YP_395234.1 81428234 3776998 620543..621202 1 NC_007576.1 glycine/betaine/carnitine/choline ABC transporter permease 621202 3776998 LSA0619 Lactobacillus sakei subsp. sakei 23K glycine/betaine/carnitine/choline ABC transporter permease YP_395234.1 620543 D 314315 CDS YP_395235.1 81428235 3777009 complement(621318..622208) 1 NC_007576.1 pseudouridine synthase 622208 rluA1 3777009 rluA1 Lactobacillus sakei subsp. sakei 23K pseudouridine synthase YP_395235.1 621318 R 314315 CDS YP_395236.1 81428236 3777010 622364..624445 1 NC_007576.1 bifunctional glycolsyltransferase/transpeptidase penicillin binding protein 2A 624445 pbp2A 3777010 pbp2A Lactobacillus sakei subsp. sakei 23K bifunctional glycolsyltransferase/transpeptidase penicillin binding protein 2A YP_395236.1 622364 D 314315 CDS YP_395237.1 81428237 3777011 624469..624813 1 NC_007576.1 hypothetical protein 624813 3777011 LSA0622 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395237.1 624469 D 314315 CDS YP_395238.1 81428238 3777012 624948..626141 1 NC_007576.1 metallo-phosphoesterase 626141 3777012 LSA0623 Lactobacillus sakei subsp. sakei 23K metallo-phosphoesterase YP_395238.1 624948 D 314315 CDS YP_395239.1 81428239 3777013 626144..628855 1 NC_007576.1 hypothetical protein 628855 3777013 LSA0624 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395239.1 626144 D 314315 CDS YP_395240.1 81428240 3777014 628845..629813 1 NC_007576.1 metal-dependent phosphohydrolase 629813 3777014 LSA0625 Lactobacillus sakei subsp. sakei 23K metal-dependent phosphohydrolase YP_395240.1 628845 D 314315 CDS YP_395241.1 81428241 3777015 complement(629874..630785) 1 NC_007576.1 cis/trans isomerase of peptidylprolyl; PPIase; membrane-bound lipoprotein; peptidyl-prolyl isomerase 630785 prsA 3777015 prsA Lactobacillus sakei subsp. sakei 23K peptidyl-prolyl isomerase YP_395241.1 629874 R 314315 CDS YP_395242.1 81428242 3777016 complement(630948..631274) 1 NC_007576.1 hypothetical protein 631274 3777016 LSA0627 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395242.1 630948 R 314315 CDS YP_395243.1 81428243 3777071 complement(631277..631705) 1 NC_007576.1 diadenosine polyphosphate hydrolase 631705 3777071 LSA0628 Lactobacillus sakei subsp. sakei 23K diadenosine polyphosphate hydrolase YP_395243.1 631277 R 314315 CDS YP_395244.1 81428244 3777072 631926..632654 1 NC_007576.1 drug ABC exporter, ATP-binding subunit 632654 3777072 LSA0629 Lactobacillus sakei subsp. sakei 23K drug ABC exporter, ATP-binding subunit YP_395244.1 631926 D 314315 CDS YP_395245.1 81428245 3777073 632654..633856 1 NC_007576.1 drug ABC exporter, membrane-spanning/permease subunit 633856 3777073 LSA0630 Lactobacillus sakei subsp. sakei 23K drug ABC exporter, membrane-spanning/permease subunit YP_395245.1 632654 D 314315 CDS YP_395246.1 81428246 3777074 633989..634783 1 NC_007576.1 aminoglycoside phosphotransferase 634783 3777074 LSA0631 Lactobacillus sakei subsp. sakei 23K aminoglycoside phosphotransferase YP_395246.1 633989 D 314315 CDS YP_395247.1 81428247 3777075 634988..635629 1 NC_007576.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 635629 trmB 3777075 trmB Lactobacillus sakei subsp. sakei 23K tRNA (guanine-N(7)-)-methyltransferase YP_395247.1 634988 D 314315 CDS YP_395248.1 81428248 3777076 complement(635701..636027) 1 NC_007576.1 small extracellular protein 636027 3777076 LSA0633 Lactobacillus sakei subsp. sakei 23K small extracellular protein YP_395248.1 635701 R 314315 CDS YP_395249.1 81428249 3777077 636150..636470 1 NC_007576.1 thioredoxin 636470 trxA4 3777077 trxA4 Lactobacillus sakei subsp. sakei 23K thioredoxin YP_395249.1 636150 D 314315 CDS YP_395250.1 81428250 3777078 636489..637118 1 NC_007576.1 aminoacyl-tRNA synthetase 637118 3777078 LSA0635 Lactobacillus sakei subsp. sakei 23K aminoacyl-tRNA synthetase YP_395250.1 636489 D 314315 CDS YP_395251.1 81428251 3777112 637303..639207 1 NC_007576.1 asparagine synthetase, glutamine-hydrolysing 639207 asnB 3777112 asnB Lactobacillus sakei subsp. sakei 23K asparagine synthetase, glutamine-hydrolysing YP_395251.1 637303 D 314315 CDS YP_395252.1 81428252 3777113 639369..640703 1 NC_007576.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 640703 murC 3777113 murC Lactobacillus sakei subsp. sakei 23K UDP-N-acetylmuramate--L-alanine ligase YP_395252.1 639369 D 314315 CDS YP_395253.1 81428253 3777114 640800..641501 1 NC_007576.1 hypothetical protein 641501 3777114 LSA0638 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395253.1 640800 D 314315 CDS YP_395254.1 81428254 3777115 641762..642070 1 NC_007576.1 PadR family transcriptional regulator 642070 3777115 LSA0639 Lactobacillus sakei subsp. sakei 23K PadR family transcriptional regulator YP_395254.1 641762 D 314315 CDS YP_395255.1 81428255 3777116 642070..642669 1 NC_007576.1 hypothetical protein 642669 3777116 LSA0640 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395255.1 642070 D 314315 CDS YP_395256.1 81428256 3777117 642670..642828 1 NC_007576.1 extracellular peptide 642828 3777117 LSA0641 Lactobacillus sakei subsp. sakei 23K extracellular peptide YP_395256.1 642670 D 314315 CDS YP_395257.1 81428257 3777118 complement(642884..643321) 1 NC_007576.1 universal stress protein UspA family protein 643321 usp3 3777118 usp3 Lactobacillus sakei subsp. sakei 23K universal stress protein UspA family protein YP_395257.1 642884 R 314315 CDS YP_395258.1 81428258 3777119 643705..646116 1 NC_007576.1 catalyzes the removal of N-terminal dipeptides when proline is the penultimate residue; x-prolyl-dipeptidyl aminopeptidase 646116 pepX 3777119 pepX Lactobacillus sakei subsp. sakei 23K x-prolyl-dipeptidyl aminopeptidase YP_395258.1 643705 D 314315 CDS YP_395259.1 81428259 3777240 646137..646646 1 NC_007576.1 acyl-CoA thioester hydrolase 646646 3777240 LSA0644 Lactobacillus sakei subsp. sakei 23K acyl-CoA thioester hydrolase YP_395259.1 646137 D 314315 CDS YP_395260.1 81428260 3777241 646951..647307 1 NC_007576.1 hypothetical protein 647307 3777241 LSA0645 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395260.1 646951 D 314315 CDS YP_395261.1 81428261 3777242 647279..649096 1 NC_007576.1 acyltransferase 649096 3777242 LSA0646 Lactobacillus sakei subsp. sakei 23K acyltransferase YP_395261.1 647279 D 314315 CDS YP_395262.1 81428262 3777243 649359..650597 1 NC_007576.1 hypothetical protein 650597 3777243 LSA0647 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395262.1 649359 D 314315 CDS YP_395263.1 81428263 3777244 650802..651983 1 NC_007576.1 penicillin-binding protein (Beta-lactamase class C) 651983 3777244 LSA0648 Lactobacillus sakei subsp. sakei 23K penicillin-binding protein (Beta-lactamase class C) YP_395263.1 650802 D 314315 CDS YP_395264.1 81428264 3777245 652158..653675 1 NC_007576.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 653675 glpK 3777245 glpK Lactobacillus sakei subsp. sakei 23K glycerol kinase YP_395264.1 652158 D 314315 CDS YP_395265.1 81428265 3777246 653687..655513 1 NC_007576.1 glycerol-3-phosphate dehydrogenase 655513 glpD 3777246 glpD Lactobacillus sakei subsp. sakei 23K glycerol-3-phosphate dehydrogenase YP_395265.1 653687 D 314315 CDS YP_395266.1 81428266 3777247 655538..656257 1 NC_007576.1 glycerol uptake facilitator protein 656257 glpF 3777247 glpF Lactobacillus sakei subsp. sakei 23K glycerol uptake facilitator protein YP_395266.1 655538 D 314315 CDS YP_395267.1 81428267 3777248 656478..656963 1 NC_007576.1 phosphoribosylaminoimidazole carboxylase catalytic subunit 656963 purE 3777248 purE Lactobacillus sakei subsp. sakei 23K phosphoribosylaminoimidazole carboxylase catalytic subunit YP_395267.1 656478 D 314315 CDS YP_395268.1 81428268 3777249 656947..658098 1 NC_007576.1 phosphoribosylaminoimidazole carboxylase ATPase 658098 purK1 3777249 purK1 Lactobacillus sakei subsp. sakei 23K phosphoribosylaminoimidazole carboxylase ATPase YP_395268.1 656947 D 314315 CDS YP_395269.1 81428269 3777250 658095..659390 1 NC_007576.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 659390 purB1 3777250 purB1 Lactobacillus sakei subsp. sakei 23K adenylosuccinate lyase YP_395269.1 658095 D 314315 CDS YP_395270.1 81428270 3777251 659503..660228 1 NC_007576.1 phosphoribosylaminoimidazole-succinocarboxamide synthase 660228 purC 3777251 purC Lactobacillus sakei subsp. sakei 23K phosphoribosylaminoimidazole-succinocarboxamide synthase YP_395270.1 659503 D 314315 CDS YP_395271.1 81428271 3777252 660221..660481 1 NC_007576.1 phosphoribosylformylglycinamidine synthase 660481 purS 3777252 purS Lactobacillus sakei subsp. sakei 23K phosphoribosylformylglycinamidine synthase YP_395271.1 660221 D 314315 CDS YP_395272.1 81428272 3777253 660478..661164 1 NC_007576.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 661164 purQ 3777253 purQ Lactobacillus sakei subsp. sakei 23K phosphoribosylformylglycinamidine synthase I YP_395272.1 660478 D 314315 CDS YP_395273.1 81428273 3777254 661154..663379 1 NC_007576.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 663379 purL 3777254 purL Lactobacillus sakei subsp. sakei 23K phosphoribosylformylglycinamidine synthase II YP_395273.1 661154 D 314315 CDS YP_395274.1 81428274 3777255 663355..664788 1 NC_007576.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 664788 purF 3777255 purF Lactobacillus sakei subsp. sakei 23K amidophosphoribosyltransferase YP_395274.1 663355 D 314315 CDS YP_395275.1 81428275 3777557 664794..665822 1 NC_007576.1 phosphoribosylformylglycinamidine cyclo-ligase 665822 purM 3777557 purM Lactobacillus sakei subsp. sakei 23K phosphoribosylformylglycinamidine cyclo-ligase YP_395275.1 664794 D 314315 CDS YP_395276.1 81428276 3777558 665819..666388 1 NC_007576.1 phosphoribosylglycinamide formyltransferase 666388 purN 3777558 purN Lactobacillus sakei subsp. sakei 23K phosphoribosylglycinamide formyltransferase YP_395276.1 665819 D 314315 CDS YP_395277.1 81428277 3777559 666405..667937 1 NC_007576.1 bifunctional phospho ribosylaminoimidazole carboxamide formyltransferase/IMP cyclohydrolase 667937 purH 3777559 purH Lactobacillus sakei subsp. sakei 23K bifunctional phospho ribosylaminoimidazole carboxamide formyltransferase/IMP cyclohydrolase YP_395277.1 666405 D 314315 CDS YP_395278.1 81428278 3777560 667952..669202 1 NC_007576.1 phosphoribosylamine--glycine ligase 669202 purD 3777560 purD Lactobacillus sakei subsp. sakei 23K phosphoribosylamine--glycine ligase YP_395278.1 667952 D 314315 CDS YP_395279.1 81428279 3777561 669284..669523 1 NC_007576.1 L-lactate oxidase (N-terminal fragment), degenerate 669523 loxL1N 3777561 loxL1N Lactobacillus sakei subsp. sakei 23K L-lactate oxidase (N-terminal fragment), degenerate YP_395279.1 669284 D 314315 CDS YP_395280.1 81428280 3777562 669505..670236 1 NC_007576.1 L-lactate oxidase (central fragment), degenerate 670236 loxL1I 3777562 loxL1I Lactobacillus sakei subsp. sakei 23K L-lactate oxidase (central fragment), degenerate YP_395280.1 669505 D 314315 CDS YP_395281.1 81428281 3777563 670266..670361 1 NC_007576.1 L-lactate oxidase (C-terminal fragment), degenerate 670361 loxL1C 3777563 loxL1C Lactobacillus sakei subsp. sakei 23K L-lactate oxidase (C-terminal fragment), degenerate YP_395281.1 670266 D 314315 CDS YP_395282.1 81428282 3777564 670508..670747 1 NC_007576.1 hypothetical protein 670747 3777564 LSA0667 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395282.1 670508 D 314315 CDS YP_395283.1 81428283 3777690 complement(670866..671108) 1 NC_007576.1 hypothetical protein 671108 3777690 LSA0668 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395283.1 670866 R 314315 CDS YP_395284.1 81428284 3777691 671315..671935 1 NC_007576.1 TetR family transcriptional regulator 671935 3777691 LSA0669 Lactobacillus sakei subsp. sakei 23K TetR family transcriptional regulator YP_395284.1 671315 D 314315 CDS YP_395285.1 81428285 3777692 672083..672391 1 NC_007576.1 50S ribosomal protein L21 672391 rplU 3777692 rplU Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L21 YP_395285.1 672083 D 314315 CDS YP_395286.1 81428286 3777693 672406..672747 1 NC_007576.1 ribosomal protein 672747 3777693 LSA0671 Lactobacillus sakei subsp. sakei 23K ribosomal protein YP_395286.1 672406 D 314315 CDS YP_395287.1 81428287 3777694 672776..673063 1 NC_007576.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 673063 rpmA 3777694 rpmA Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L27 YP_395287.1 672776 D 314315 CDS YP_395288.1 81428288 3777695 673365..673922 1 NC_007576.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 673922 efp2 3777695 efp2 Lactobacillus sakei subsp. sakei 23K elongation factor P YP_395288.1 673365 D 314315 CDS YP_395289.1 81428289 3777696 673968..674411 1 NC_007576.1 general stress protein 674411 3777696 LSA0674 Lactobacillus sakei subsp. sakei 23K general stress protein YP_395289.1 673968 D 314315 CDS YP_395290.1 81428290 3777697 674411..674839 1 NC_007576.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 674839 nusB 3777697 nusB Lactobacillus sakei subsp. sakei 23K transcription antitermination protein NusB YP_395290.1 674411 D 314315 CDS YP_395291.1 81428291 3777698 675034..675885 1 NC_007576.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 675885 folD 3777698 folD Lactobacillus sakei subsp. sakei 23K bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_395291.1 675034 D 314315 CDS YP_395292.1 81428292 3777886 675878..677227 1 NC_007576.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 677227 xseA 3777886 xseA Lactobacillus sakei subsp. sakei 23K exodeoxyribonuclease VII large subunit YP_395292.1 675878 D 314315 CDS YP_395293.1 81428293 3777887 677229..677459 1 NC_007576.1 exodeoxyribonuclease VII small subunit 677459 xseB 3777887 xseB Lactobacillus sakei subsp. sakei 23K exodeoxyribonuclease VII small subunit YP_395293.1 677229 D 314315 CDS YP_395294.1 81428294 3777888 677459..678331 1 NC_007576.1 farnesyl-diphosphate synthase 678331 ispA 3777888 ispA Lactobacillus sakei subsp. sakei 23K farnesyl-diphosphate synthase YP_395294.1 677459 D 314315 CDS YP_395295.1 81428295 3777889 678340..679170 1 NC_007576.1 rRNA methylase, hemolysin A-like protein 679170 3777889 LSA0680 Lactobacillus sakei subsp. sakei 23K rRNA methylase, hemolysin A-like protein YP_395295.1 678340 D 314315 CDS YP_395296.1 81428296 3777890 679250..679702 1 NC_007576.1 ArgR family transcriptional regulator 679702 3777890 LSA0681 Lactobacillus sakei subsp. sakei 23K ArgR family transcriptional regulator YP_395296.1 679250 D 314315 CDS YP_395297.1 81428297 3777891 679752..681455 1 NC_007576.1 DNA repair and genetic recombination protein N 681455 recN 3777891 recN Lactobacillus sakei subsp. sakei 23K DNA repair and genetic recombination protein N YP_395297.1 679752 D 314315 CDS YP_395298.1 81428298 3777892 complement(681514..681837) 1 NC_007576.1 hypothetical protein 681837 3777892 LSA0683 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395298.1 681514 R 314315 CDS YP_395299.1 81428299 3777893 681960..682184 1 NC_007576.1 hypothetical protein 682184 3777893 LSA0684 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395299.1 681960 D 314315 CDS YP_395300.1 81428300 3778130 682257..682868 1 NC_007576.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 682868 gmk 3778130 gmk Lactobacillus sakei subsp. sakei 23K guanylate kinase YP_395300.1 682257 D 314315 CDS YP_395301.1 81428301 3778131 682873..683130 1 NC_007576.1 DNA-directed RNA polymerase subunit omega 683130 rpoZ 3778131 rpoZ Lactobacillus sakei subsp. sakei 23K DNA-directed RNA polymerase subunit omega YP_395301.1 682873 D 314315 CDS YP_395302.1 81428302 3778132 683219..684436 1 NC_007576.1 phosphopantothenoylcysteinesynthetase/decarboxyl a se 684436 dfp 3778132 dfp Lactobacillus sakei subsp. sakei 23K phosphopantothenoylcysteinesynthetase/decarboxyl a se YP_395302.1 683219 D 314315 CDS YP_395303.1 81428303 3778133 684438..686855 1 NC_007576.1 primosomal replication protein N 686855 priA 3778133 priA Lactobacillus sakei subsp. sakei 23K primosomal replication protein N YP_395303.1 684438 D 314315 CDS YP_395304.1 81428304 3778134 686875..687831 1 NC_007576.1 methionyl-tRNA formyltransferase 687831 fmt 3778134 fmt Lactobacillus sakei subsp. sakei 23K methionyl-tRNA formyltransferase YP_395304.1 686875 D 314315 CDS YP_395305.1 81428305 3778135 687821..689164 1 NC_007576.1 rRNA methytransferase (sun protein) 689164 3778135 LSA0690 Lactobacillus sakei subsp. sakei 23K rRNA methytransferase (sun protein) YP_395305.1 687821 D 314315 CDS YP_395306.1 81428306 3778136 689186..689932 1 NC_007576.1 serine/threonine protein phosphatase 689932 3778136 LSA0691 Lactobacillus sakei subsp. sakei 23K serine/threonine protein phosphatase YP_395306.1 689186 D 314315 CDS YP_395307.1 81428307 3778137 689929..691812 1 NC_007576.1 serine/threonine protein kinase 691812 3778137 LSA0692 Lactobacillus sakei subsp. sakei 23K serine/threonine protein kinase YP_395307.1 689929 D 314315 CDS YP_395308.1 81428308 3778179 691912..692811 1 NC_007576.1 GTP-binding protein 692811 3778179 LSA0693 Lactobacillus sakei subsp. sakei 23K GTP-binding protein YP_395308.1 691912 D 314315 CDS YP_395309.1 81428309 3778180 692835..693497 1 NC_007576.1 ribulose-phosphate 3-epimerase 693497 rpe 3778180 rpe Lactobacillus sakei subsp. sakei 23K ribulose-phosphate 3-epimerase YP_395309.1 692835 D 314315 CDS YP_395310.1 81428310 3778181 693484..694134 1 NC_007576.1 thiamin pyrophosphokinase 694134 3778181 LSA0695 Lactobacillus sakei subsp. sakei 23K thiamin pyrophosphokinase YP_395310.1 693484 D 314315 CDS YP_395311.1 81428311 3778182 complement(694487..694672) 1 NC_007576.1 required for 70S ribosome assembly; 50S ribosomal protein L28 694672 rpmB 3778182 rpmB Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L28 YP_395311.1 694487 R 314315 CDS YP_395312.1 81428312 3778183 694975..695337 1 NC_007576.1 general stress protein 695337 3778183 LSA0697 Lactobacillus sakei subsp. sakei 23K general stress protein YP_395312.1 694975 D 314315 CDS YP_395313.1 81428313 3778184 695401..697071 1 NC_007576.1 hypothetical protein 697071 3778184 LSA0698 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395313.1 695401 D 314315 CDS YP_395314.1 81428314 3778185 697657..699699 1 NC_007576.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 699699 recG 3778185 recG Lactobacillus sakei subsp. sakei 23K ATP-dependent DNA helicase RecG YP_395314.1 697657 D 314315 CDS YP_395315.1 81428315 3778186 699719..700732 1 NC_007576.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 700732 plsX 3778186 plsX Lactobacillus sakei subsp. sakei 23K glycerol-3-phosphate acyltransferase PlsX YP_395315.1 699719 D 314315 CDS YP_395316.1 81428316 3778660 700879..701121 1 NC_007576.1 acyl carrier protein 701121 acp 3778660 acp Lactobacillus sakei subsp. sakei 23K acyl carrier protein YP_395316.1 700879 D 314315 CDS YP_395317.1 81428317 3778661 701594..703240 1 NC_007576.1 oligopeptide ABC transporter substrate-binding lipoprotein 703240 oppA 3778661 oppA Lactobacillus sakei subsp. sakei 23K oligopeptide ABC transporter substrate-binding lipoprotein YP_395317.1 701594 D 314315 CDS YP_395318.1 81428318 3778662 703310..704245 1 NC_007576.1 oligopeptide ABC transporter permease 704245 oppB 3778662 oppB Lactobacillus sakei subsp. sakei 23K oligopeptide ABC transporter permease YP_395318.1 703310 D 314315 CDS YP_395319.1 81428319 3778663 704246..705259 1 NC_007576.1 oligopeptide ABC transporter permease 705259 oppC 3778663 oppC Lactobacillus sakei subsp. sakei 23K oligopeptide ABC transporter permease YP_395319.1 704246 D 314315 CDS YP_395320.1 81428320 3778664 705546..706571 1 NC_007576.1 oligopeptide ABC transporter ATP-binding subunit 706571 oppD 3778664 oppD Lactobacillus sakei subsp. sakei 23K oligopeptide ABC transporter ATP-binding subunit YP_395320.1 705546 D 314315 CDS YP_395321.1 81428321 3778665 706600..707562 1 NC_007576.1 oligopeptide ABC transporter ATP-binding subunit 707562 oppF 3778665 oppF Lactobacillus sakei subsp. sakei 23K oligopeptide ABC transporter ATP-binding subunit YP_395321.1 706600 D 314315 CDS YP_395322.1 81428322 3778666 707734..708426 1 NC_007576.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 708426 rnc 3778666 rnc Lactobacillus sakei subsp. sakei 23K ribonuclease III YP_395322.1 707734 D 314315 CDS YP_395323.1 81428323 3778667 708462..712022 1 NC_007576.1 chromosome seggregation Smc protein 712022 smc 3778667 smc Lactobacillus sakei subsp. sakei 23K chromosome seggregation Smc protein YP_395323.1 708462 D 314315 CDS YP_395324.1 81428324 3778211 712033..713496 1 NC_007576.1 Signal recognition particle-docking protein FtsY 713496 ftsY 3778211 ftsY Lactobacillus sakei subsp. sakei 23K Signal recognition particle-docking protein FtsY YP_395324.1 712033 D 314315 CDS YP_395325.1 81428325 3778212 713569..714606 1 NC_007576.1 hypothetical protein 714606 3778212 LSA0710 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395325.1 713569 D 314315 CDS YP_395326.1 81428326 3778213 714711..715994 1 NC_007576.1 gluconate permease 715994 3778213 LSA0711 Lactobacillus sakei subsp. sakei 23K gluconate permease YP_395326.1 714711 D 314315 CDS YP_395327.1 81428327 3778214 716005..717150 1 NC_007576.1 glycerate kinase 717150 3778214 LSA0712 Lactobacillus sakei subsp. sakei 23K glycerate kinase YP_395327.1 716005 D 314315 CDS YP_395328.1 81428328 3778215 717276..717617 1 NC_007576.1 DNA-binding protein 717617 3778215 LSA0713 Lactobacillus sakei subsp. sakei 23K DNA-binding protein YP_395328.1 717276 D 314315 CDS YP_395329.1 81428329 3778216 717642..719078 1 NC_007576.1 Signal recognition particle protein Ffh 719078 ffh 3778216 ffh Lactobacillus sakei subsp. sakei 23K Signal recognition particle protein Ffh YP_395329.1 717642 D 314315 CDS YP_395330.1 81428330 3778217 719171..719446 1 NC_007576.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 719446 rpsP 3778217 rpsP Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S16 YP_395330.1 719171 D 314315 CDS YP_395331.1 81428331 3778218 719456..719698 1 NC_007576.1 hypothetical protein 719698 3778218 LSA0716 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395331.1 719456 D 314315 CDS YP_395332.1 81428332 3777184 719764..720294 1 NC_007576.1 16S rRNA-processing protein RimM 720294 rimM 3777184 rimM Lactobacillus sakei subsp. sakei 23K 16S rRNA-processing protein RimM YP_395332.1 719764 D 314315 CDS YP_395333.1 81428333 3777185 720284..721024 1 NC_007576.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 721024 trmD 3777185 trmD Lactobacillus sakei subsp. sakei 23K tRNA (guanine-N(1)-)-methyltransferase YP_395333.1 720284 D 314315 CDS YP_395334.1 81428334 3777186 721143..721490 1 NC_007576.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 721490 rplS 3777186 rplS Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L19 YP_395334.1 721143 D 314315 CDS YP_395335.1 81428335 3777187 721568..721756 1 NC_007576.1 hypothetical protein 721756 3777187 LSA0720 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395335.1 721568 D 314315 CDS YP_395336.1 81428336 3777188 complement(721772..722158) 1 NC_007576.1 hypothetical protein 722158 3777188 LSA0721 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395336.1 721772 R 314315 CDS YP_395337.1 81428337 3777189 complement(722304..722651) 1 NC_007576.1 hypothetical protein 722651 3777189 LSA0722 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395337.1 722304 R 314315 CDS YP_395338.1 81428338 3777190 722846..722995 1 NC_007576.1 hypothetical protein 722995 3777190 LSA0723 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395338.1 722846 D 314315 CDS YP_395339.1 81428339 3777191 complement(724352..725152) 1 NC_007576.1 hypothetical protein 725152 3777191 LSA0724 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395339.1 724352 R 314315 CDS YP_395340.1 81428340 3778741 complement(725613..726038) 1 NC_007576.1 hypothetical protein 726038 3778741 LSA0725 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395340.1 725613 R 314315 CDS YP_395341.1 81428341 3778742 complement(726348..727265) 1 NC_007576.1 cell surface protein 727265 3778742 LSA0727 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_395341.1 726348 R 314315 CDS YP_395342.1 81428342 3778743 727741..727983 1 NC_007576.1 hypothetical protein 727983 3778743 LSA0728 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395342.1 727741 D 314315 CDS YP_395343.1 81428343 3778744 complement(728064..728570) 1 NC_007576.1 hypothetical protein 728570 3778744 LSA0729 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395343.1 728064 R 314315 CDS YP_395344.1 81428344 3778745 728693..728857 1 NC_007576.1 hypothetical protein 728857 3778745 LSA0730 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395344.1 728693 D 314315 CDS YP_395345.1 81428345 3778746 728958..729404 1 NC_007576.1 hypothetical protein 729404 3778746 LSA0731 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395345.1 728958 D 314315 CDS YP_395346.1 81428346 3778747 729437..729823 1 NC_007576.1 hypothetical protein 729823 3778747 LSA0732 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395346.1 729437 D 314315 CDS YP_395347.1 81428347 3778748 729967..730491 1 NC_007576.1 hypothetical protein 730491 3778748 LSA0733 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395347.1 729967 D 314315 CDS YP_395348.1 81428348 3778749 730555..731457 1 NC_007576.1 50S ribosomal protein L11 methyltransferase 731457 prmA 3778749 prmA Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L11 methyltransferase YP_395348.1 730555 D 314315 CDS YP_395349.1 81428349 3778701 731469..732224 1 NC_007576.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 732224 3778701 LSA0735 Lactobacillus sakei subsp. sakei 23K 16S ribosomal RNA methyltransferase RsmE YP_395349.1 731469 D 314315 CDS YP_395350.1 81428350 3778702 732264..732608 1 NC_007576.1 hypothetical protein 732608 3778702 LSA0736 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395350.1 732264 D 314315 CDS YP_395351.1 81428351 3778703 732689..734920 1 NC_007576.1 GTP pyrophosphokinase 734920 relA 3778703 relA Lactobacillus sakei subsp. sakei 23K GTP pyrophosphokinase YP_395351.1 732689 D 314315 CDS YP_395352.1 81428352 3778704 734933..735379 1 NC_007576.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 735379 dtd 3778704 dtd Lactobacillus sakei subsp. sakei 23K D-tyrosyl-tRNA(Tyr) deacylase YP_395352.1 734933 D 314315 CDS YP_395353.1 81428353 3778705 735379..736005 1 NC_007576.1 haloacid dehalogenase 736005 3778705 LSA0739 Lactobacillus sakei subsp. sakei 23K haloacid dehalogenase YP_395353.1 735379 D 314315 CDS YP_395354.1 81428354 3778706 complement(736043..736399) 1 NC_007576.1 hypothetical protein 736399 3778706 LSA0740 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395354.1 736043 R 314315 CDS YP_395355.1 81428355 3778707 736527..736649 1 NC_007576.1 hypothetical protein 736649 3778707 LSA0741 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395355.1 736527 D 314315 CDS YP_395356.1 81428356 3778708 736911..737342 1 NC_007576.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 737342 3778708 LSA0742 Lactobacillus sakei subsp. sakei 23K cell division protein MraZ YP_395356.1 736911 D 314315 CDS YP_395357.1 81428357 3778644 737357..738313 1 NC_007576.1 S-adenosylmethionine-dependent-methyltran sferase 738313 3778644 LSA0743 Lactobacillus sakei subsp. sakei 23K S-adenosylmethionine-dependent-methyltran sferase YP_395357.1 737357 D 314315 CDS YP_395358.1 81428358 3778645 738319..738699 1 NC_007576.1 cell division protein FtsL 738699 ftsL 3778645 ftsL Lactobacillus sakei subsp. sakei 23K cell division protein FtsL YP_395358.1 738319 D 314315 CDS YP_395359.1 81428359 3778646 738762..740834 1 NC_007576.1 bifunctional dimerisation/transpeptidase penicillin-binding 2B 740834 pbp2B1 3778646 pbp2B1 Lactobacillus sakei subsp. sakei 23K bifunctional dimerisation/transpeptidase penicillin-binding 2B YP_395359.1 738762 D 314315 CDS YP_395360.1 81428360 3778647 740867..741829 1 NC_007576.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 741829 mraY 3778647 mraY Lactobacillus sakei subsp. sakei 23K phospho-N-acetylmuramoyl-pentapeptide- transferase YP_395360.1 740867 D 314315 CDS YP_395361.1 81428361 3778648 741845..743209 1 NC_007576.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 743209 murD 3778648 murD Lactobacillus sakei subsp. sakei 23K UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_395361.1 741845 D 314315 CDS YP_395362.2 162012654 3778649 743225..744325 1 NC_007576.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 744325 murG 3778649 murG Lactobacillus sakei subsp. sakei 23K diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_395362.2 743225 D 314315 CDS YP_395363.1 81428363 3778650 744347..745207 1 NC_007576.1 cell division protein FtsQ 745207 ftsQ 3778650 ftsQ Lactobacillus sakei subsp. sakei 23K cell division protein FtsQ YP_395363.1 744347 D 314315 CDS YP_395364.1 81428364 3778651 745337..746647 1 NC_007576.1 cell division protein, FtsA 746647 ftsA 3778651 ftsA Lactobacillus sakei subsp. sakei 23K cell division protein, FtsA YP_395364.1 745337 D 314315 CDS YP_395365.1 81428365 3778596 746675..747913 1 NC_007576.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 747913 ftsZ 3778596 ftsZ Lactobacillus sakei subsp. sakei 23K cell division protein FtsZ YP_395365.1 746675 D 314315 CDS YP_395366.1 81428366 3778597 747929..748363 1 NC_007576.1 hypothetical protein 748363 3778597 LSA0752 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395366.1 747929 D 314315 CDS YP_395367.1 81428367 3778598 748364..748648 1 NC_007576.1 hypothetical protein 748648 3778598 LSA0753 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395367.1 748364 D 314315 CDS YP_395368.1 81428368 3778599 748650..749438 1 NC_007576.1 hypothetical protein 749438 3778599 LSA0754 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395368.1 748650 D 314315 CDS YP_395369.1 81428369 3778600 749472..750296 1 NC_007576.1 cell-division initiation protein (septum placement) 750296 divIVA 3778600 divIVA Lactobacillus sakei subsp. sakei 23K cell-division initiation protein (septum placement) YP_395369.1 749472 D 314315 CDS YP_395370.1 81428370 3778601 750528..753314 1 NC_007576.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 753314 ileS 3778601 ileS Lactobacillus sakei subsp. sakei 23K isoleucyl-tRNA synthetase YP_395370.1 750528 D 314315 CDS YP_395371.1 81428371 3778602 753486..754028 1 NC_007576.1 hypothetical protein 754028 3778602 LSA0757 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395371.1 753486 D 314315 CDS YP_395372.1 81428372 3778603 754349..754489 1 NC_007576.1 extracellular peptide 754489 3778603 LSA0758 Lactobacillus sakei subsp. sakei 23K extracellular peptide YP_395372.1 754349 D 314315 CDS YP_395373.1 81428373 3778488 754505..754696 1 NC_007576.1 mannose-specific phosphotransferase system, enzyme IIA (N-terminal fragment), authentic frameshift 754696 3778488 LSA0759 Lactobacillus sakei subsp. sakei 23K mannose-specific phosphotransferase system, enzyme IIA (N-terminal fragment), authentic frameshift YP_395373.1 754505 D 314315 CDS YP_395374.1 81428374 3778489 754693..754926 1 NC_007576.1 mannose-specific phosphotransferase system, enzyme IIA (C-terminal fragment), authentic frameshift 754926 3778489 LSA0760 Lactobacillus sakei subsp. sakei 23K mannose-specific phosphotransferase system, enzyme IIA (C-terminal fragment), authentic frameshift YP_395374.1 754693 D 314315 CDS YP_395375.1 81428375 3778490 755103..757175 1 NC_007576.1 DNA topoisomerase III 757175 topB 3778490 topB Lactobacillus sakei subsp. sakei 23K DNA topoisomerase III YP_395375.1 755103 D 314315 CDS YP_395376.1 81428376 3778491 complement(757301..758155) 1 NC_007576.1 extracellular/cell surface DNA-entry nuclease 758155 3778491 LSA0762 Lactobacillus sakei subsp. sakei 23K extracellular/cell surface DNA-entry nuclease YP_395376.1 757301 R 314315 CDS YP_395377.1 81428377 3778492 complement(758268..759260) 1 NC_007576.1 LacI family transcriptional repressor 759260 galR 3778492 galR Lactobacillus sakei subsp. sakei 23K LacI family transcriptional repressor YP_395377.1 758268 R 314315 CDS YP_395378.1 81428378 3778493 759399..760565 1 NC_007576.1 catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase 760565 galK 3778493 galK Lactobacillus sakei subsp. sakei 23K galactokinase YP_395378.1 759399 D 314315 CDS YP_395379.1 81428379 3778494 760591..761583 1 NC_007576.1 UDP-glucose 4-epimerase 761583 galE1 3778494 galE1 Lactobacillus sakei subsp. sakei 23K UDP-glucose 4-epimerase YP_395379.1 760591 D 314315 CDS YP_395380.1 81428380 3778495 761594..763090 1 NC_007576.1 catalyzes the formation of alpha-D-glucose 1-phosphate and UDP-galactose from UDP-glucose and alpha-D-galactose 1-phosphate in galactose metabolism; galactose-1-phosphate uridylyltransferase 763090 galT 3778495 galT Lactobacillus sakei subsp. sakei 23K galactose-1-phosphate uridylyltransferase YP_395380.1 761594 D 314315 CDS YP_395381.1 81428381 3778472 763136..764176 1 NC_007576.1 aldose 1-epimerase 764176 galM 3778472 galM Lactobacillus sakei subsp. sakei 23K aldose 1-epimerase YP_395381.1 763136 D 314315 CDS YP_395382.1 81428382 3778473 764283..764483 1 NC_007576.1 cold shock protein CspA family protein 764483 csp1 3778473 csp1 Lactobacillus sakei subsp. sakei 23K cold shock protein CspA family protein YP_395382.1 764283 D 314315 CDS YP_395383.1 81428383 3778474 764868..766127 1 NC_007576.1 tyrosyl-tRNA synthetase 766127 tyrS 3778474 tyrS Lactobacillus sakei subsp. sakei 23K tyrosyl-tRNA synthetase YP_395383.1 764868 D 314315 CDS YP_395384.1 81428384 3778475 766358..767785 1 NC_007576.1 drug:H(+) antiporter 767785 3778475 LSA0770 Lactobacillus sakei subsp. sakei 23K drug:H(+) antiporter YP_395384.1 766358 D 314315 CDS YP_395385.1 81428385 3778476 complement(767806..768678) 1 NC_007576.1 hypothetical protein 768678 3778476 LSA0771 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395385.1 767806 R 314315 CDS YP_395386.1 81428386 3778477 complement(768747..769943) 1 NC_007576.1 hypothetical protein 769943 3778477 LSA0772 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395386.1 768747 R 314315 CDS YP_395387.1 81428387 3778478 complement(769943..770623) 1 NC_007576.1 hypothetical protein 770623 3778478 LSA0773 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395387.1 769943 R 314315 CDS YP_395388.1 81428388 3778479 770814..771356 1 NC_007576.1 ADP-ribose phosphorylase 771356 3778479 LSA0774 Lactobacillus sakei subsp. sakei 23K ADP-ribose phosphorylase YP_395388.1 770814 D 314315 CDS YP_395389.1 81428389 3778332 771368..771658 1 NC_007576.1 hypothetical protein 771658 3778332 LSA0775 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395389.1 771368 D 314315 CDS YP_395390.1 81428390 3778333 771701..772393 1 NC_007576.1 methylthioadenosine nucleosidase 772393 pfs 3778333 pfs Lactobacillus sakei subsp. sakei 23K methylthioadenosine nucleosidase YP_395390.1 771701 D 314315 CDS YP_395391.1 81428391 3778334 772649..772909 1 NC_007576.1 hypothetical protein 772909 3778334 LSA0777 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395391.1 772649 D 314315 CDS YP_395392.1 81428392 3778335 773016..773471 1 NC_007576.1 hypothetical protein 773471 3778335 LSA0778 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395392.1 773016 D 314315 CDS YP_395393.1 81428393 3778336 773487..774461 1 NC_007576.1 hypothetical protein 774461 3778336 LSA0779 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395393.1 773487 D 314315 CDS YP_395394.1 81428394 3778337 complement(774830..775555) 1 NC_007576.1 cobalt ABC transporter ATP-binding protein 775555 3778337 LSA0780 Lactobacillus sakei subsp. sakei 23K cobalt ABC transporter ATP-binding protein YP_395394.1 774830 R 314315 CDS YP_395395.1 81428395 3778338 complement(775561..776370) 1 NC_007576.1 cobalt ABC transporter permease/transmembrane protein 776370 3778338 LSA0781 Lactobacillus sakei subsp. sakei 23K cobalt ABC transporter permease/transmembrane protein YP_395395.1 775561 R 314315 CDS YP_395396.1 81428396 3778339 complement(776354..777361) 1 NC_007576.1 catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM 777361 3778339 LSA0782 Lactobacillus sakei subsp. sakei 23K cobalt transport protein CbiM YP_395396.1 776354 R 314315 CDS YP_395397.1 81428397 3778307 complement(777460..778125) 1 NC_007576.1 Fnr/Crp family transcriptional regulator 778125 3778307 LSA0783 Lactobacillus sakei subsp. sakei 23K Fnr/Crp family transcriptional regulator YP_395397.1 777460 R 314315 CDS YP_395398.1 81428398 3778308 778359..779633 1 NC_007576.1 hypothetical protein 779633 3778308 LSA0784 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395398.1 778359 D 314315 CDS YP_395399.1 81428399 3778309 779645..780427 1 NC_007576.1 NCAIR mutase, PurE-related protein 780427 3778309 LSA0785 Lactobacillus sakei subsp. sakei 23K NCAIR mutase, PurE-related protein YP_395399.1 779645 D 314315 CDS YP_395400.1 81428400 3778310 780424..781248 1 NC_007576.1 hypothetical protein 781248 3778310 LSA0786 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395400.1 780424 D 314315 CDS YP_395401.1 81428401 3778311 781230..781700 1 NC_007576.1 hypothetical protein 781700 3778311 LSA0787 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395401.1 781230 D 314315 CDS YP_395402.1 81428402 3778312 781764..782477 1 NC_007576.1 MIP family facilitator protein 782477 3778312 LSA0788 Lactobacillus sakei subsp. sakei 23K MIP family facilitator protein YP_395402.1 781764 D 314315 CDS YP_395403.1 81428403 3778313 782498..782803 1 NC_007576.1 hypothetical protein 782803 3778313 LSA0789 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395403.1 782498 D 314315 CDS YP_395404.1 81428404 3778314 782828..783664 1 NC_007576.1 hypothetical protein 783664 3778314 LSA0790 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395404.1 782828 D 314315 CDS YP_395405.1 81428405 3778315 783792..784958 1 NC_007576.1 cysteine desulfurase 784958 3778315 LSA0791 Lactobacillus sakei subsp. sakei 23K cysteine desulfurase YP_395405.1 783792 D 314315 CDS YP_395406.1 81428406 3778267 785018..785365 1 NC_007576.1 hypothetical protein 785365 3778267 LSA0792 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395406.1 785018 D 314315 CDS YP_395407.1 81428407 3778268 785551..786690 1 NC_007576.1 tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase 786690 trmU 3778268 trmU Lactobacillus sakei subsp. sakei 23K tRNA(5-methylaminomethyl-2-thiouridylate)- methyltransferase YP_395407.1 785551 D 314315 CDS YP_395408.1 81428408 3778269 786849..787499 1 NC_007576.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 787499 deoC 3778269 deoC Lactobacillus sakei subsp. sakei 23K deoxyribose-phosphate aldolase YP_395408.1 786849 D 314315 CDS YP_395409.1 81428409 3778270 787515..788705 1 NC_007576.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 788705 deoB 3778270 deoB Lactobacillus sakei subsp. sakei 23K phosphopentomutase YP_395409.1 787515 D 314315 CDS YP_395410.1 81428410 3778271 788722..789426 1 NC_007576.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 789426 deoD 3778271 deoD Lactobacillus sakei subsp. sakei 23K purine nucleoside phosphorylase YP_395410.1 788722 D 314315 CDS YP_395411.1 81428411 3778272 789448..790677 1 NC_007576.1 pyrimidine-specific nucleoside symporter 790677 3778272 LSA0798 Lactobacillus sakei subsp. sakei 23K pyrimidine-specific nucleoside symporter YP_395411.1 789448 D 314315 CDS YP_395412.1 81428412 3778273 790701..791975 1 NC_007576.1 purine transport protein 791975 3778273 LSA0799 Lactobacillus sakei subsp. sakei 23K purine transport protein YP_395412.1 790701 D 314315 CDS YP_395413.1 81428413 3778274 792003..792956 1 NC_007576.1 deoxyribonucleoside synthesis operon transcriptional regulator 792956 deoR 3778274 deoR Lactobacillus sakei subsp. sakei 23K deoxyribonucleoside synthesis operon transcriptional regulator YP_395413.1 792003 D 314315 CDS YP_395414.1 81428414 3778203 792975..794273 1 NC_007576.1 pyrimidine-nucleoside phosphorylase 794273 pdp 3778203 pdp Lactobacillus sakei subsp. sakei 23K pyrimidine-nucleoside phosphorylase YP_395414.1 792975 D 314315 CDS YP_395415.1 81428415 3778204 794510..795844 1 NC_007576.1 NADH oxidase 795844 nox 3778204 nox Lactobacillus sakei subsp. sakei 23K NADH oxidase YP_395415.1 794510 D 314315 CDS YP_395416.1 81428416 3778205 795997..796656 1 NC_007576.1 phosphoglycerate mutase 796656 gpm4 3778205 gpm4 Lactobacillus sakei subsp. sakei 23K phosphoglycerate mutase YP_395416.1 795997 D 314315 CDS YP_395417.1 81428417 3778206 796668..797327 1 NC_007576.1 hypothetical protein 797327 3778206 LSA0804 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395417.1 796668 D 314315 CDS YP_395418.1 81428418 3778207 797333..799861 1 NC_007576.1 exodeoxyribonuclease V subunit alpha 799861 recD 3778207 recD Lactobacillus sakei subsp. sakei 23K exodeoxyribonuclease V subunit alpha YP_395418.1 797333 D 314315 CDS YP_395419.1 81428419 3778208 799904..801115 1 NC_007576.1 GNAT family acetyltransferase 801115 3778208 LSA0806 Lactobacillus sakei subsp. sakei 23K GNAT family acetyltransferase YP_395419.1 799904 D 314315 CDS YP_395420.1 81428420 3778209 complement(801176..801415) 1 NC_007576.1 hypothetical protein 801415 3778209 LSA0807 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395420.1 801176 R 314315 CDS YP_395421.1 81428421 3778210 801681..802292 1 NC_007576.1 amino acid export protein 802292 3778210 LSA0808 Lactobacillus sakei subsp. sakei 23K amino acid export protein YP_395421.1 801681 D 314315 CDS YP_395422.1 81428422 3778195 802383..803483 1 NC_007576.1 DNA alkylation repair protein 803483 3778195 LSA0809 Lactobacillus sakei subsp. sakei 23K DNA alkylation repair protein YP_395422.1 802383 D 314315 CDS YP_395423.1 81428423 3778196 803677..804393 1 NC_007576.1 MerR family transcriptional regulator 804393 3778196 LSA0810 Lactobacillus sakei subsp. sakei 23K MerR family transcriptional regulator YP_395423.1 803677 D 314315 CDS YP_395424.1 81428424 3778197 804395..804949 1 NC_007576.1 acetyltransferase 804949 3778197 LSA0811 Lactobacillus sakei subsp. sakei 23K acetyltransferase YP_395424.1 804395 D 314315 CDS YP_395425.1 81428425 3778198 805217..805672 1 NC_007576.1 (3R)-hydroxymyristoyl-ACP dehydratase 805672 fabZ1 3778198 fabZ1 Lactobacillus sakei subsp. sakei 23K (3R)-hydroxymyristoyl-ACP dehydratase YP_395425.1 805217 D 314315 CDS YP_395426.1 81428426 3778199 805683..806663 1 NC_007576.1 3-oxoacyl-ACP synthase 806663 fabH 3778199 fabH Lactobacillus sakei subsp. sakei 23K 3-oxoacyl-ACP synthase YP_395426.1 805683 D 314315 CDS YP_395427.1 81428427 3778200 806706..806945 1 NC_007576.1 acyl carrier protein 806945 acpP 3778200 acpP Lactobacillus sakei subsp. sakei 23K acyl carrier protein YP_395427.1 806706 D 314315 CDS YP_395428.1 81428428 3778201 807086..808027 1 NC_007576.1 malonyl-CoA:ACP transacylase 808027 fabD 3778201 fabD Lactobacillus sakei subsp. sakei 23K malonyl-CoA:ACP transacylase YP_395428.1 807086 D 314315 CDS YP_395429.1 81428429 3778202 808027..808758 1 NC_007576.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 808758 fabG 3778202 fabG Lactobacillus sakei subsp. sakei 23K 3-ketoacyl-ACP reductase YP_395429.1 808027 D 314315 CDS YP_395430.1 81428430 3778154 808796..810004 1 NC_007576.1 3-oxoacyl-ACP synthase 810004 fabF 3778154 fabF Lactobacillus sakei subsp. sakei 23K 3-oxoacyl-ACP synthase YP_395430.1 808796 D 314315 CDS YP_395431.1 81428431 3778155 810009..810464 1 NC_007576.1 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 810464 accB 3778155 accB Lactobacillus sakei subsp. sakei 23K acetyl-CoA carboxylase biotin carboxyl carrier protein subunit YP_395431.1 810009 D 314315 CDS YP_395432.1 81428432 3778156 810468..810890 1 NC_007576.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 810890 fabZ 3778156 fabZ Lactobacillus sakei subsp. sakei 23K (3R)-hydroxymyristoyl-ACP dehydratase YP_395432.1 810468 D 314315 CDS YP_395433.1 81428433 3778157 810904..812250 1 NC_007576.1 Acetyl-CoA carboxylase (biotin carbooxylase subunit) 812250 accC 3778157 accC Lactobacillus sakei subsp. sakei 23K Acetyl-CoA carboxylase (biotin carbooxylase subunit) YP_395433.1 810904 D 314315 CDS YP_395434.1 81428434 3778158 812264..813115 1 NC_007576.1 Acetyl-CoA carboxylase (carboxyl transferase beta subunit) 813115 accD 3778158 accD Lactobacillus sakei subsp. sakei 23K Acetyl-CoA carboxylase (carboxyl transferase beta subunit) YP_395434.1 812264 D 314315 CDS YP_395435.1 81428435 3778159 813093..813890 1 NC_007576.1 Acetyl-CoA carboxylase (carboxyl transferase subunit alpha) 813890 accA 3778159 accA Lactobacillus sakei subsp. sakei 23K Acetyl-CoA carboxylase (carboxyl transferase subunit alpha) YP_395435.1 813093 D 314315 CDS YP_395436.1 81428436 3778160 813914..814663 1 NC_007576.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 814663 fabI 3778160 fabI Lactobacillus sakei subsp. sakei 23K enoyl-ACP reductase YP_395436.1 813914 D 314315 CDS YP_395437.1 81428437 3778161 814669..815424 1 NC_007576.1 biotin-[acetyl-CoA carboxylase] ligase 815424 birA1 3778161 birA1 Lactobacillus sakei subsp. sakei 23K biotin-[acetyl-CoA carboxylase] ligase YP_395437.1 814669 D 314315 CDS YP_395438.1 81428438 3778106 815443..815976 1 NC_007576.1 biotin synthesis protein 815976 3778106 LSA0825 Lactobacillus sakei subsp. sakei 23K biotin synthesis protein YP_395438.1 815443 D 314315 CDS YP_395439.1 81428439 3778107 815979..816050 1 NC_007576.1 hypothetical protein 816050 3778107 LSA0826 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395439.1 815979 D 314315 CDS YP_395440.1 81428440 3778108 816091..817233 1 NC_007576.1 lipoprotein precursor 817233 3778108 LSA0827 Lactobacillus sakei subsp. sakei 23K lipoprotein precursor YP_395440.1 816091 D 314315 CDS YP_395441.1 81428441 3778109 817297..817767 1 NC_007576.1 hypothetical protein 817767 3778109 LSA0828 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395441.1 817297 D 314315 CDS YP_395442.1 81428442 3778110 complement(817806..818351) 1 NC_007576.1 hypothetical protein 818351 3778110 LSA0829 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395442.1 817806 R 314315 CDS YP_395443.1 81428443 3778111 complement(818364..819338) 1 NC_007576.1 inosine-uridine preferring nucleoside hydrolase 819338 iunH3 3778111 iunH3 Lactobacillus sakei subsp. sakei 23K inosine-uridine preferring nucleoside hydrolase YP_395443.1 818364 R 314315 CDS YP_395444.1 81428444 3778112 complement(819795..820397) 1 NC_007576.1 nitroreductase (oxidoreductase) 820397 3778112 LSA0831 Lactobacillus sakei subsp. sakei 23K nitroreductase (oxidoreductase) YP_395444.1 819795 R 314315 CDS YP_395445.1 81428445 3778113 820725..821699 1 NC_007576.1 hypothetical protein 821699 3778113 LSA0832 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395445.1 820725 D 314315 CDS YP_395446.1 81428446 3778017 821726..822376 1 NC_007576.1 haloacid dehalogenase 822376 3778017 LSA0833 Lactobacillus sakei subsp. sakei 23K haloacid dehalogenase YP_395446.1 821726 D 314315 CDS YP_395447.1 81428447 3778018 822516..823370 1 NC_007576.1 XRE family transcriptional regulator 823370 3778018 LSA0835 Lactobacillus sakei subsp. sakei 23K XRE family transcriptional regulator YP_395447.1 822516 D 314315 CDS YP_395448.1 81428448 3778019 complement(823411..823905) 1 NC_007576.1 universal stress protein UspA family protein 823905 usp6 3778019 usp6 Lactobacillus sakei subsp. sakei 23K universal stress protein UspA family protein YP_395448.1 823411 R 314315 CDS YP_395449.1 81428449 3778020 complement(823968..824243) 1 NC_007576.1 hypothetical protein 824243 3778020 LSA0837 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395449.1 823968 R 314315 CDS YP_395450.1 81428450 3778021 complement(824558..825838) 1 NC_007576.1 recombination factor protein RarA 825838 3778021 LSA0839 Lactobacillus sakei subsp. sakei 23K recombination factor protein RarA YP_395450.1 824558 R 314315 CDS YP_395451.1 81428451 3778022 825971..828250 1 NC_007576.1 Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; bifunctional glutamate--cysteine ligase/glutathione synthetase 828250 3778022 LSA0840 Lactobacillus sakei subsp. sakei 23K bifunctional glutamate--cysteine ligase/glutathione synthetase YP_395451.1 825971 D 314315 CDS YP_395452.1 81428452 3778023 complement(828305..828748) 1 NC_007576.1 hypothetical protein 828748 3778023 LSA0841 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395452.1 828305 R 314315 CDS YP_395453.1 81428453 3778024 828819..829424 1 NC_007576.1 hypothetical protein 829424 3778024 LSA0842 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395453.1 828819 D 314315 CDS YP_395454.1 81428454 3778008 complement(829520..830125) 1 NC_007576.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 830125 rpsD 3778008 rpsD Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S4 YP_395454.1 829520 R 314315 CDS YP_395455.1 81428455 3778009 830498..832210 1 NC_007576.1 acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation; septation ring formation regulator EzrA 832210 3778009 LSA0845 Lactobacillus sakei subsp. sakei 23K septation ring formation regulator EzrA YP_395455.1 830498 D 314315 CDS YP_395456.1 81428456 3778010 832370..833518 1 NC_007576.1 cysteine desulfurase 833518 3778010 LSA0846 Lactobacillus sakei subsp. sakei 23K cysteine desulfurase YP_395456.1 832370 D 314315 CDS YP_395457.1 81428457 3778011 833543..834760 1 NC_007576.1 Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 834760 thiI 3778011 thiI Lactobacillus sakei subsp. sakei 23K thiamine biosynthesis protein ThiI YP_395457.1 833543 D 314315 CDS YP_395458.1 81428458 3778012 834888..835514 1 NC_007576.1 modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex 835514 3778012 LSA0848 Lactobacillus sakei subsp. sakei 23K redox-sensing transcriptional repressor Rex YP_395458.1 834888 D 314315 CDS YP_395459.1 81428459 3778013 835833..838481 1 NC_007576.1 valyl-tRNA synthetase 838481 valS 3778013 valS Lactobacillus sakei subsp. sakei 23K valyl-tRNA synthetase YP_395459.1 835833 D 314315 CDS YP_395460.1 81428460 3778014 838603..839907 1 NC_007576.1 polylpolyglutamate synthase 839907 folC1 3778014 folC1 Lactobacillus sakei subsp. sakei 23K polylpolyglutamate synthase YP_395460.1 838603 D 314315 CDS YP_395461.1 81428461 3778015 839935..840558 1 NC_007576.1 haloacid dehalogenase 840558 3778015 LSA0851 Lactobacillus sakei subsp. sakei 23K haloacid dehalogenase YP_395461.1 839935 D 314315 CDS YP_395462.1 81428462 3778016 840632..841306 1 NC_007576.1 DNA repair protein (RadC) 841306 radC 3778016 radC Lactobacillus sakei subsp. sakei 23K DNA repair protein (RadC) YP_395462.1 840632 D 314315 CDS YP_395463.1 81428463 3777951 841470..842474 1 NC_007576.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 842474 mreB 3777951 mreB Lactobacillus sakei subsp. sakei 23K rod shape-determining protein MreB YP_395463.1 841470 D 314315 CDS YP_395464.1 81428464 3777952 842632..843492 1 NC_007576.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 843492 mreC 3777952 mreC Lactobacillus sakei subsp. sakei 23K rod shape-determining protein MreC YP_395464.1 842632 D 314315 CDS YP_395465.1 81428465 3777953 843479..844024 1 NC_007576.1 cell shape determining protein 844024 mreD 3777953 mreD Lactobacillus sakei subsp. sakei 23K cell shape determining protein YP_395465.1 843479 D 314315 CDS YP_395466.1 81428466 3777954 844041..844712 1 NC_007576.1 septum site-determining protein 844712 minC 3777954 minC Lactobacillus sakei subsp. sakei 23K septum site-determining protein YP_395466.1 844041 D 314315 CDS YP_395467.1 81428467 3777955 844714..845508 1 NC_007576.1 septum formation-inhibiting ATPase, ATPase ParA-type 845508 minD 3777955 minD Lactobacillus sakei subsp. sakei 23K septum formation-inhibiting ATPase, ATPase ParA-type YP_395467.1 844714 D 314315 CDS YP_395468.1 81428468 3777956 845960..846601 1 NC_007576.1 amino acid ABC transporter transmembrane protein 846601 3777956 LSA0858 Lactobacillus sakei subsp. sakei 23K amino acid ABC transporter transmembrane protein YP_395468.1 845960 D 314315 CDS YP_395469.1 81428469 3777957 846614..847255 1 NC_007576.1 amino acid ABC transporter ATP-binding protein 847255 ls859 3777957 ls859 Lactobacillus sakei subsp. sakei 23K amino acid ABC transporter ATP-binding protein YP_395469.1 846614 D 314315 CDS YP_395470.1 81428470 3777958 847252..848055 1 NC_007576.1 amino acid ABC transporter substrate-binding protein 848055 3777958 LSA0860 Lactobacillus sakei subsp. sakei 23K amino acid ABC transporter substrate-binding protein YP_395470.1 847252 D 314315 CDS YP_395471.1 81428471 3777943 848068..849504 1 NC_007576.1 cardiolipin synthase 849504 cls1 3777943 cls1 Lactobacillus sakei subsp. sakei 23K cardiolipin synthase YP_395471.1 848068 D 314315 CDS YP_395472.1 81428472 3777944 complement(849559..850881) 1 NC_007576.1 N-acetylmuramoyl-L-alanine amidase 850881 3777944 LSA0862 Lactobacillus sakei subsp. sakei 23K N-acetylmuramoyl-L-alanine amidase YP_395472.1 849559 R 314315 CDS YP_395473.1 81428473 3777945 851270..852574 1 NC_007576.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 852574 hisS 3777945 hisS Lactobacillus sakei subsp. sakei 23K histidyl-tRNA synthetase YP_395473.1 851270 D 314315 CDS YP_395474.1 81428474 3777946 852574..854346 1 NC_007576.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 854346 aspS 3777946 aspS Lactobacillus sakei subsp. sakei 23K aspartyl-tRNA synthetase YP_395474.1 852574 D 314315 CDS YP_395475.1 81428475 3777947 854459..854890 1 NC_007576.1 methionine sulfoxide reductase 854890 3777947 LSA0865 Lactobacillus sakei subsp. sakei 23K methionine sulfoxide reductase YP_395475.1 854459 D 314315 CDS YP_395476.1 81428476 3777948 854890..855408 1 NC_007576.1 protein methionine sulfoxide reductase 855408 msrA 3777948 msrA Lactobacillus sakei subsp. sakei 23K protein methionine sulfoxide reductase YP_395476.1 854890 D 314315 CDS YP_395477.1 81428477 3777949 855486..856364 1 NC_007576.1 hypothetical protein 856364 3777949 LSA0867 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395477.1 855486 D 314315 CDS YP_395478.1 81428478 3777950 856511..857413 1 NC_007576.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 857413 nfo 3777950 nfo Lactobacillus sakei subsp. sakei 23K endonuclease IV YP_395478.1 856511 D 314315 CDS YP_395479.1 81428479 3777927 857397..857480 1 NC_007576.1 hypothetical protein 857480 3777927 LSA0869 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395479.1 857397 D 314315 CDS YP_395480.1 81428480 3777928 857470..859275 1 NC_007576.1 hypothetical protein 859275 3777928 LSA0870 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395480.1 857470 D 314315 CDS YP_395481.1 81428481 3777929 859376..860050 1 NC_007576.1 nitroreductase (oxidoreductase) 860050 3777929 LSA0871 Lactobacillus sakei subsp. sakei 23K nitroreductase (oxidoreductase) YP_395481.1 859376 D 314315 CDS YP_395482.1 81428482 3777930 complement(860078..860920) 1 NC_007576.1 hypothetical protein 860920 3777930 LSA0872 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395482.1 860078 R 314315 CDS YP_395483.1 81428483 3777931 861130..861306 1 NC_007576.1 30S ribosomal protein S21 861306 rpsU 3777931 rpsU Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S21 YP_395483.1 861130 D 314315 CDS YP_395484.1 81428484 3777932 861331..861774 1 NC_007576.1 hypothetical protein 861774 3777932 LSA0874 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395484.1 861331 D 314315 CDS YP_395485.1 81428485 3777933 862069..863037 1 NC_007576.1 phosphate starvation-inducible protein, PhoH 863037 phoH 3777933 phoH Lactobacillus sakei subsp. sakei 23K phosphate starvation-inducible protein, PhoH YP_395485.1 862069 D 314315 CDS YP_395486.1 81428486 3777934 863047..863523 1 NC_007576.1 hypothetical protein 863523 3777934 LSA0876 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395486.1 863047 D 314315 CDS YP_395487.1 81428487 3777862 863501..863902 1 NC_007576.1 diacylglycerol kinase 863902 dgkA 3777862 dgkA Lactobacillus sakei subsp. sakei 23K diacylglycerol kinase YP_395487.1 863501 D 314315 CDS YP_395488.1 81428488 3777863 863938..864840 1 NC_007576.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 864840 era 3777863 era Lactobacillus sakei subsp. sakei 23K GTP-binding protein Era YP_395488.1 863938 D 314315 CDS YP_395489.1 81428489 3777864 864850..865668 1 NC_007576.1 DNA repair protein O 865668 recO 3777864 recO Lactobacillus sakei subsp. sakei 23K DNA repair protein O YP_395489.1 864850 D 314315 CDS YP_395490.1 81428490 3777865 865906..866823 1 NC_007576.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 866823 glyQ 3777865 glyQ Lactobacillus sakei subsp. sakei 23K glycyl-tRNA synthetase subunit alpha YP_395490.1 865906 D 314315 CDS YP_395491.1 81428491 3777866 866816..868897 1 NC_007576.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 868897 glyS 3777866 glyS Lactobacillus sakei subsp. sakei 23K glycyl-tRNA synthetase subunit beta YP_395491.1 866816 D 314315 CDS YP_395492.1 81428492 3777867 868922..869284 1 NC_007576.1 hypothetical protein 869284 3777867 LSA0882 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395492.1 868922 D 314315 CDS YP_395493.1 81428493 3777868 869440..871323 1 NC_007576.1 DNA primase G 871323 dnaG 3777868 dnaG Lactobacillus sakei subsp. sakei 23K DNA primase G YP_395493.1 869440 D 314315 CDS YP_395494.1 81428494 3777869 871347..872456 1 NC_007576.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium; RNA polymerase sigma factor RpoD 872456 sigA 3777869 sigA Lactobacillus sakei subsp. sakei 23K RNA polymerase sigma factor RpoD YP_395494.1 871347 D 314315 CDS YP_395495.1 81428495 3777797 complement(872576..872770) 1 NC_007576.1 hypothetical protein 872770 3777797 LSA0885 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395495.1 872576 R 314315 CDS YP_395496.1 81428496 3777798 872971..873678 1 NC_007576.1 hypothetical protein 873678 3777798 LSA0886 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395496.1 872971 D 314315 CDS YP_395497.1 81428497 3777799 873666..874799 1 NC_007576.1 hypothetical protein 874799 3777799 LSA0887 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395497.1 873666 D 314315 CDS YP_395498.1 81428498 3777800 874844..876085 1 NC_007576.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 876085 pepT 3777800 pepT Lactobacillus sakei subsp. sakei 23K peptidase T YP_395498.1 874844 D 314315 CDS YP_395499.1 81428499 3777801 complement(876140..876862) 1 NC_007576.1 3-dehydroquinate dehydratase 876862 aroD 3777801 aroD Lactobacillus sakei subsp. sakei 23K 3-dehydroquinate dehydratase YP_395499.1 876140 R 314315 CDS YP_395500.1 81428500 3777802 complement(876880..877599) 1 NC_007576.1 lipoprotein precursor 877599 3777802 LSA0890 Lactobacillus sakei subsp. sakei 23K lipoprotein precursor YP_395500.1 876880 R 314315 CDS YP_395501.1 81428501 3777803 complement(877746..878570) 1 NC_007576.1 lipase/esterase 878570 3777803 LSA0891 Lactobacillus sakei subsp. sakei 23K lipase/esterase YP_395501.1 877746 R 314315 CDS YP_395502.1 81428502 3777804 878761..879633 1 NC_007576.1 shikimate 5-dehydrogenase 879633 aroE 3777804 aroE Lactobacillus sakei subsp. sakei 23K shikimate 5-dehydrogenase YP_395502.1 878761 D 314315 CDS YP_395503.1 81428503 3777732 879630..880625 1 NC_007576.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; 3-deoxy-7-phosphoheptulonate synthase 880625 aroH 3777732 aroH Lactobacillus sakei subsp. sakei 23K 3-deoxy-7-phosphoheptulonate synthase YP_395503.1 879630 D 314315 CDS YP_395504.1 81428504 3777733 880628..881695 1 NC_007576.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 881695 aroB 3777733 aroB Lactobacillus sakei subsp. sakei 23K 3-dehydroquinate synthase YP_395504.1 880628 D 314315 CDS YP_395505.1 81428505 3777734 881773..882303 1 NC_007576.1 shikimate kinase 882303 aroK 3777734 aroK Lactobacillus sakei subsp. sakei 23K shikimate kinase YP_395505.1 881773 D 314315 CDS YP_395506.1 81428506 3777735 882391..882990 1 NC_007576.1 Iron/manganese superoxide dismutase 882990 sodA 3777735 sodA Lactobacillus sakei subsp. sakei 23K Iron/manganese superoxide dismutase YP_395506.1 882391 D 314315 CDS YP_395507.1 81428507 3777736 complement(883107..884543) 1 NC_007576.1 peptidase U34 884543 pepD5 3777736 pepD5 Lactobacillus sakei subsp. sakei 23K peptidase U34 YP_395507.1 883107 R 314315 CDS YP_395508.1 81428508 3777737 884676..884864 1 NC_007576.1 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; 4-oxalocrotonate tautomerase 884864 3777737 LSA0898 Lactobacillus sakei subsp. sakei 23K 4-oxalocrotonate tautomerase YP_395508.1 884676 D 314315 CDS YP_395509.1 81428509 3777738 complement(885030..885836) 1 NC_007576.1 haloacid dehalogenase 885836 3777738 LSA0899 Lactobacillus sakei subsp. sakei 23K haloacid dehalogenase YP_395509.1 885030 R 314315 CDS YP_395510.1 81428510 3777739 885971..886318 1 NC_007576.1 hypothetical protein 886318 3777739 LSA0900 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395510.1 885971 D 314315 CDS YP_395511.1 81428511 3777723 886397..887182 1 NC_007576.1 hypothetical protein 887182 3777723 LSA0901 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395511.1 886397 D 314315 CDS YP_395512.1 81428512 3777724 887205..888170 1 NC_007576.1 hypothetical protein 888170 3777724 LSA0902 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395512.1 887205 D 314315 CDS YP_395513.1 81428513 3777725 complement(888230..889042) 1 NC_007576.1 IS150 family transposase 889042 tnpB3-ISLsa2 3777725 tnpB3-ISLsa2 Lactobacillus sakei subsp. sakei 23K IS150 family transposase YP_395513.1 888230 R 314315 CDS YP_395514.1 81428514 3777726 complement(889084..889242) 1 NC_007576.1 transposase 889242 tnpA3C-ISLsa2 3777726 tnpA3C-ISLsa2 Lactobacillus sakei subsp. sakei 23K transposase YP_395514.1 889084 R 314315 CDS YP_395515.1 81428515 3777727 complement(889249..889401) 1 NC_007576.1 transposase 889401 tnpA3N-ISLsa2 3777727 tnpA3N-ISLsa2 Lactobacillus sakei subsp. sakei 23K transposase YP_395515.1 889249 R 314315 CDS YP_395516.1 81428516 3777728 complement(889672..890721) 1 NC_007576.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase 890721 idi 3777728 idi Lactobacillus sakei subsp. sakei 23K isopentenyl pyrophosphate isomerase YP_395516.1 889672 R 314315 CDS YP_395517.1 81428517 3777729 complement(890734..891837) 1 NC_007576.1 phosphomevalonate kinase 891837 mvaK2 3777729 mvaK2 Lactobacillus sakei subsp. sakei 23K phosphomevalonate kinase YP_395517.1 890734 R 314315 CDS YP_395518.1 81428518 3777730 complement(891843..892817) 1 NC_007576.1 diphosphomevalonate decarboxylase 892817 mvaD 3777730 mvaD Lactobacillus sakei subsp. sakei 23K diphosphomevalonate decarboxylase YP_395518.1 891843 R 314315 CDS YP_395519.1 81428519 3777731 complement(892840..893787) 1 NC_007576.1 mevalonate kinase 893787 mvaK1 3777731 mvaK1 Lactobacillus sakei subsp. sakei 23K mevalonate kinase YP_395519.1 892840 R 314315 CDS YP_395520.1 81428520 3777715 894068..897628 1 NC_007576.1 ATP-dependent exonuclease, subunit B (ATP-dependent exonuclease, subunit B) 897628 rexB 3777715 rexB Lactobacillus sakei subsp. sakei 23K ATP-dependent exonuclease, subunit B (ATP-dependent exonuclease, subunit B) YP_395520.1 894068 D 314315 CDS YP_395521.1 81428521 3777716 897612..900284 1 NC_007576.1 ATP-dependent exonuclease, subunit A (N terminal fragment), authentic frameshift 900284 rexAN 3777716 rexAN Lactobacillus sakei subsp. sakei 23K ATP-dependent exonuclease, subunit A (N terminal fragment), authentic frameshift YP_395521.1 897612 D 314315 CDS YP_395522.1 81428522 3777717 900301..901356 1 NC_007576.1 ATP-dependent exonuclease, subunit A (C terminal fragment), authentic frameshift 901356 rexAC 3777717 rexAC Lactobacillus sakei subsp. sakei 23K ATP-dependent exonuclease, subunit A (C terminal fragment), authentic frameshift YP_395522.1 900301 D 314315 CDS YP_395523.1 81428523 3777718 901422..904256 1 NC_007576.1 ATP-dependent helicase 904256 3777718 LSA0912 Lactobacillus sakei subsp. sakei 23K ATP-dependent helicase YP_395523.1 901422 D 314315 CDS YP_395524.1 81428524 3777719 904334..904810 1 NC_007576.1 hypothetical protein 904810 3777719 LSA0913 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395524.1 904334 D 314315 CDS YP_395525.1 81428525 3777720 904921..906219 1 NC_007576.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 906219 asnC 3777720 asnC Lactobacillus sakei subsp. sakei 23K asparaginyl-tRNA synthetase YP_395525.1 904921 D 314315 CDS YP_395526.1 81428526 3777721 906340..906963 1 NC_007576.1 DNA replication protein DnaD (primosomal protein DnaD) 906963 dnaD 3777721 dnaD Lactobacillus sakei subsp. sakei 23K DNA replication protein DnaD (primosomal protein DnaD) YP_395526.1 906340 D 314315 CDS YP_395527.1 81428527 3777722 906987..907637 1 NC_007576.1 DNA repair protein, endonuclease III 907637 3777722 LSA0916 Lactobacillus sakei subsp. sakei 23K DNA repair protein, endonuclease III YP_395527.1 906987 D 314315 CDS YP_395528.1 81428528 3777699 complement(907714..910017) 1 NC_007576.1 bifunctional glycosyltransferase/transpeptidase penicillin-binding protein 1A 910017 pbp1A 3777699 pbp1A Lactobacillus sakei subsp. sakei 23K bifunctional glycosyltransferase/transpeptidase penicillin-binding protein 1A YP_395528.1 907714 R 314315 CDS YP_395529.1 81428529 3777700 complement(910024..910656) 1 NC_007576.1 functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC; Holliday junction-specific endonuclease 910656 recU 3777700 recU Lactobacillus sakei subsp. sakei 23K Holliday junction-specific endonuclease YP_395529.1 910024 R 314315 CDS YP_395530.1 81428530 3777701 910732..911292 1 NC_007576.1 hypothetical protein 911292 3777701 LSA0919 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395530.1 910732 D 314315 CDS YP_395531.1 81428531 3777702 911372..911752 1 NC_007576.1 GpsB; guiding PBP1 shuttling; similar to DivIVA; cell division protein GpsB 911752 3777702 LSA0920 Lactobacillus sakei subsp. sakei 23K cell division protein GpsB YP_395531.1 911372 D 314315 CDS YP_395532.1 81428532 3777703 912242..913393 1 NC_007576.1 adenine-specific DNA methyltransferase 913393 3777703 LSA0921 Lactobacillus sakei subsp. sakei 23K adenine-specific DNA methyltransferase YP_395532.1 912242 D 314315 CDS YP_395533.1 81428533 3777704 913496..914449 1 NC_007576.1 D-3-phosphoglycerate dehydrogenase 914449 serA 3777704 serA Lactobacillus sakei subsp. sakei 23K D-3-phosphoglycerate dehydrogenase YP_395533.1 913496 D 314315 CDS YP_395534.1 81428534 3777705 complement(914504..914893) 1 NC_007576.1 phage envelope protein 914893 3777705 LSA0923 Lactobacillus sakei subsp. sakei 23K phage envelope protein YP_395534.1 914504 R 314315 CDS YP_395535.1 81428535 3777706 915240..915824 1 NC_007576.1 site-specific recombinase phage integrase 915824 3777706 LSA0924 Lactobacillus sakei subsp. sakei 23K site-specific recombinase phage integrase YP_395535.1 915240 D 314315 CDS YP_395536.1 81428536 3777673 915956..916996 1 NC_007576.1 zinc-containg alcohol dehydrogenase (oxidoreductase) 916996 adh 3777673 adh Lactobacillus sakei subsp. sakei 23K zinc-containg alcohol dehydrogenase (oxidoreductase) YP_395536.1 915956 D 314315 CDS YP_395537.1 81428537 3777674 917018..917173 1 NC_007576.1 hypothetical protein 917173 3777674 LSA0926 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395537.1 917018 D 314315 CDS YP_395538.1 81428538 3777675 complement(917228..917983) 1 NC_007576.1 hypothetical protein 917983 3777675 LSA0927 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395538.1 917228 R 314315 CDS YP_395539.1 81428539 3777676 complement(917980..918783) 1 NC_007576.1 hypothetical protein 918783 3777676 LSA0928 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395539.1 917980 R 314315 CDS YP_395540.1 81428540 3777677 919156..919314 1 NC_007576.1 hypothetical protein 919314 3777677 LSA0929 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395540.1 919156 D 314315 CDS YP_395541.1 81428541 3777678 919307..920179 1 NC_007576.1 ABC transporter ATP-binding protein 920179 3777678 LSA0930 Lactobacillus sakei subsp. sakei 23K ABC transporter ATP-binding protein YP_395541.1 919307 D 314315 CDS YP_395542.1 81428542 3777679 920172..920918 1 NC_007576.1 hypothetical protein 920918 3777679 LSA0931 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395542.1 920172 D 314315 CDS YP_395544.1 81428544 3777633 921116..921769 1 NC_007576.1 hypothetical protein 921769 3777633 LSA0933 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395544.1 921116 D 314315 CDS YP_395545.1 81428545 3777634 complement(921979..922992) 1 NC_007576.1 lipoate-protein ligase 922992 lplA 3777634 lplA Lactobacillus sakei subsp. sakei 23K lipoate-protein ligase YP_395545.1 921979 R 314315 CDS YP_395546.1 81428546 3777635 complement(923111..923317) 1 NC_007576.1 XRE family transcriptional regulator 923317 3777635 LSA0935 Lactobacillus sakei subsp. sakei 23K XRE family transcriptional regulator YP_395546.1 923111 R 314315 CDS YP_395547.1 81428547 3777636 complement(923330..923797) 1 NC_007576.1 drug ABC exporter, membrane-spanning/permease subunit 923797 3777636 LSA0936 Lactobacillus sakei subsp. sakei 23K drug ABC exporter, membrane-spanning/permease subunit YP_395547.1 923330 R 314315 CDS YP_395548.1 81428548 3777637 complement(923908..924579) 1 NC_007576.1 drug ABC exporter, membrane-spanning/permease subunit 924579 3777637 LSA0937 Lactobacillus sakei subsp. sakei 23K drug ABC exporter, membrane-spanning/permease subunit YP_395548.1 923908 R 314315 CDS YP_395549.1 81428549 3777638 complement(924694..925635) 1 NC_007576.1 drug ABC exporter, ATP-binding subunit 925635 3777638 LSA0938 Lactobacillus sakei subsp. sakei 23K drug ABC exporter, ATP-binding subunit YP_395549.1 924694 R 314315 CDS YP_395550.1 81428550 3777639 925773..926279 1 NC_007576.1 MarR family transcriptional regulator 926279 3777639 LSA0939 Lactobacillus sakei subsp. sakei 23K MarR family transcriptional regulator YP_395550.1 925773 D 314315 CDS YP_395551.1 81428551 3777640 complement(926347..927303) 1 NC_007576.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 927303 nrdF 3777640 nrdF Lactobacillus sakei subsp. sakei 23K ribonucleotide-diphosphate reductase subunit beta YP_395551.1 926347 R 314315 CDS YP_395552.1 81428552 3777625 complement(927727..929898) 1 NC_007576.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 929898 nrdE 3777625 nrdE Lactobacillus sakei subsp. sakei 23K ribonucleotide-diphosphate reductase subunit alpha YP_395552.1 927727 R 314315 CDS YP_395553.1 81428553 3777626 complement(930023..930253) 1 NC_007576.1 ribonucleotide reductase, NrdH-redoxin 930253 nrdH 3777626 nrdH Lactobacillus sakei subsp. sakei 23K ribonucleotide reductase, NrdH-redoxin YP_395553.1 930023 R 314315 CDS YP_395554.1 81428554 3777627 complement(930573..932030) 1 NC_007576.1 cardiolipin synthase 932030 cls2 3777627 cls2 Lactobacillus sakei subsp. sakei 23K cardiolipin synthase YP_395554.1 930573 R 314315 CDS YP_395555.1 81428555 3777628 complement(932116..932499) 1 NC_007576.1 ribonuclease H 932499 3777628 LSA0944 Lactobacillus sakei subsp. sakei 23K ribonuclease H YP_395555.1 932116 R 314315 CDS YP_395556.1 81428556 3777629 932575..932991 1 NC_007576.1 hypothetical protein 932991 3777629 LSA0945 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395556.1 932575 D 314315 CDS YP_395557.1 81428557 3777630 complement(933054..933260) 1 NC_007576.1 cold shock protein CspA family protein 933260 csp4 3777630 csp4 Lactobacillus sakei subsp. sakei 23K cold shock protein CspA family protein YP_395557.1 933054 R 314315 CDS YP_395558.1 81428558 3777631 933463..935136 1 NC_007576.1 formate--tetrahydrofolate ligase 935136 fhs 3777631 fhs Lactobacillus sakei subsp. sakei 23K formate--tetrahydrofolate ligase YP_395558.1 933463 D 314315 CDS YP_395559.1 81428559 3777632 935242..935697 1 NC_007576.1 Signal peptidase II (lipoprotein signal peptidase) (prolipoprotein signal peptidase) 935697 lspA 3777632 lspA Lactobacillus sakei subsp. sakei 23K Signal peptidase II (lipoprotein signal peptidase) (prolipoprotein signal peptidase) YP_395559.1 935242 D 314315 CDS YP_395560.1 81428560 3777483 935690..936595 1 NC_007576.1 pseudouridylate synthase 936595 rluA2 3777483 rluA2 Lactobacillus sakei subsp. sakei 23K pseudouridylate synthase YP_395560.1 935690 D 314315 CDS YP_395561.1 81428561 3777484 936778..937317 1 NC_007576.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 937317 pyrR 3777484 pyrR Lactobacillus sakei subsp. sakei 23K bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase YP_395561.1 936778 D 314315 CDS YP_395562.1 81428562 3777485 937492..938796 1 NC_007576.1 Uracil:cation symporter 938796 pyrP 3777485 pyrP Lactobacillus sakei subsp. sakei 23K Uracil:cation symporter YP_395562.1 937492 D 314315 CDS YP_395563.1 81428563 3777486 938789..939706 1 NC_007576.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 939706 pyrB 3777486 pyrB Lactobacillus sakei subsp. sakei 23K aspartate carbamoyltransferase YP_395563.1 938789 D 314315 CDS YP_395564.1 81428564 3777487 939718..941007 1 NC_007576.1 dihydroorotase 941007 pyrC 3777487 pyrC Lactobacillus sakei subsp. sakei 23K dihydroorotase YP_395564.1 939718 D 314315 CDS YP_395565.1 81428565 3777488 941011..942087 1 NC_007576.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 942087 pyrAA 3777488 pyrAA Lactobacillus sakei subsp. sakei 23K carbamoyl phosphate synthase small subunit YP_395565.1 941011 D 314315 CDS YP_395566.1 81428566 3777489 942105..945287 1 NC_007576.1 carbamoyl-phosphate synthase, catalytic subunit 945287 pyrAB 3777489 pyrAB Lactobacillus sakei subsp. sakei 23K carbamoyl-phosphate synthase, catalytic subunit YP_395566.1 942105 D 314315 CDS YP_395567.1 81428567 3777490 945392..946183 1 NC_007576.1 dihydroorotate oxidase, electron transfer subunit 946183 pyrDA 3777490 pyrDA Lactobacillus sakei subsp. sakei 23K dihydroorotate oxidase, electron transfer subunit YP_395567.1 945392 D 314315 CDS YP_395568.1 81428568 3777466 946183..947106 1 NC_007576.1 dihydroorotate oxidase, catalytic subunit 947106 pyrDB 3777466 pyrDB Lactobacillus sakei subsp. sakei 23K dihydroorotate oxidase, catalytic subunit YP_395568.1 946183 D 314315 CDS YP_395569.1 81428569 3777467 947110..947829 1 NC_007576.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 947829 pyrF 3777467 pyrF Lactobacillus sakei subsp. sakei 23K orotidine 5'-phosphate decarboxylase YP_395569.1 947110 D 314315 CDS YP_395570.1 81428570 3777468 947826..948464 1 NC_007576.1 orotate phosphoribosyltransferase 948464 pyrE 3777468 pyrE Lactobacillus sakei subsp. sakei 23K orotate phosphoribosyltransferase YP_395570.1 947826 D 314315 CDS YP_395571.1 81428571 3777469 complement(948613..950328) 1 NC_007576.1 fibronectin/fibrinogene-binding protein 950328 3777469 LSA0960 Lactobacillus sakei subsp. sakei 23K fibronectin/fibrinogene-binding protein YP_395571.1 948613 R 314315 CDS YP_395572.1 81428572 3777470 950590..951459 1 NC_007576.1 hypothetical protein 951459 3777470 LSA0961 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395572.1 950590 D 314315 CDS YP_395573.1 81428573 3777471 complement(951543..952043) 1 NC_007576.1 hypothetical protein 952043 3777471 LSA0962 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395573.1 951543 R 314315 CDS YP_395574.1 81428574 3777472 952198..952842 1 NC_007576.1 integral membrane protein, hemolysin III related 952842 3777472 LSA0963 Lactobacillus sakei subsp. sakei 23K integral membrane protein, hemolysin III related YP_395574.1 952198 D 314315 CDS YP_395575.1 81428575 3777473 952871..953713 1 NC_007576.1 hypothetical protein 953713 3777473 LSA0964 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395575.1 952871 D 314315 CDS YP_395576.1 81428576 3777474 953839..954420 1 NC_007576.1 TerR family transcriptional regulator 954420 3777474 LSA0965 Lactobacillus sakei subsp. sakei 23K TerR family transcriptional regulator YP_395576.1 953839 D 314315 CDS YP_395577.1 81428577 3777426 954422..955429 1 NC_007576.1 Zinc-containing alcohol dehydrogenase (oxidoreductase) 955429 3777426 LSA0966 Lactobacillus sakei subsp. sakei 23K Zinc-containing alcohol dehydrogenase (oxidoreductase) YP_395577.1 954422 D 314315 CDS YP_395578.1 81428578 3777427 956249..957307 1 NC_007576.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerS; site-specific tyrosine recombinase XerS 957307 xerS 3777427 xerS Lactobacillus sakei subsp. sakei 23K site-specific tyrosine recombinase XerS YP_395578.1 956249 D 314315 CDS YP_395579.1 81428579 3777428 957521..958123 1 NC_007576.1 hypothetical protein 958123 3777428 LSA0968 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395579.1 957521 D 314315 CDS YP_395580.1 81428580 3777429 complement(958163..959959) 1 NC_007576.1 cadmium/zinc/cobalt-transporting P-type ATPase 959959 3777429 LSA0969 Lactobacillus sakei subsp. sakei 23K cadmium/zinc/cobalt-transporting P-type ATPase YP_395580.1 958163 R 314315 CDS YP_395581.1 81428581 3777430 complement(960057..960410) 1 NC_007576.1 hypothetical protein 960410 3777430 LSA0970 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395581.1 960057 R 314315 CDS YP_395582.1 81428582 3777431 complement(960467..961390) 1 NC_007576.1 catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase 961390 ppa 3777431 ppa Lactobacillus sakei subsp. sakei 23K manganese-dependent inorganic pyrophosphatase YP_395582.1 960467 R 314315 CDS YP_395583.1 81428583 3777432 complement(961443..962408) 1 NC_007576.1 LysR family transcriptional regulator 962408 3777432 LSA0972 Lactobacillus sakei subsp. sakei 23K LysR family transcriptional regulator YP_395583.1 961443 R 314315 CDS YP_395584.1 81428584 3777433 complement(962538..963347) 1 NC_007576.1 formate C-acetyltransferase activating protein 963347 pflA 3777433 pflA Lactobacillus sakei subsp. sakei 23K formate C-acetyltransferase activating protein YP_395584.1 962538 R 314315 CDS YP_395585.1 81428585 3777370 complement(963465..965726) 1 NC_007576.1 formate C-acetyltransferase 965726 pflB 3777370 pflB Lactobacillus sakei subsp. sakei 23K formate C-acetyltransferase YP_395585.1 963465 R 314315 CDS YP_395586.1 81428586 3777371 complement(966009..968474) 1 NC_007576.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 968474 parC 3777371 parC Lactobacillus sakei subsp. sakei 23K DNA topoisomerase IV subunit A YP_395586.1 966009 R 314315 CDS YP_395587.1 81428587 3777372 complement(968504..970495) 1 NC_007576.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 970495 parE 3777372 parE Lactobacillus sakei subsp. sakei 23K DNA topoisomerase IV subunit B YP_395587.1 968504 R 314315 CDS YP_395588.1 81428588 3777373 970697..971317 1 NC_007576.1 hypothetical protein 971317 3777373 LSA0977 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395588.1 970697 D 314315 CDS YP_395589.1 81428589 3777374 complement(971340..972101) 1 NC_007576.1 ABC transporter permease/transmembrane protein 972101 3777374 LSA0978 Lactobacillus sakei subsp. sakei 23K ABC transporter permease/transmembrane protein YP_395589.1 971340 R 314315 CDS YP_395590.1 81428590 3777375 complement(972085..972744) 1 NC_007576.1 ABC transporter ATP-binding protein 972744 3777375 LSA0979 Lactobacillus sakei subsp. sakei 23K ABC transporter ATP-binding protein YP_395590.1 972085 R 314315 CDS YP_395591.1 81428591 3777376 972913..973710 1 NC_007576.1 hydroxymethylpyrimidine / phosphomethylpyrimidine kinase 973710 3777376 LSA0980 Lactobacillus sakei subsp. sakei 23K hydroxymethylpyrimidine / phosphomethylpyrimidine kinase YP_395591.1 972913 D 314315 CDS YP_395592.1 81428592 3777377 complement(973885..974604) 1 NC_007576.1 acetolactate decarboxylase 974604 aldB 3777377 aldB Lactobacillus sakei subsp. sakei 23K acetolactate decarboxylase YP_395592.1 973885 R 314315 CDS YP_395593.1 81428593 3777458 complement(974638..976320) 1 NC_007576.1 catalyzes the formation of 2-acetolactate from pyruvate in stationary phase; acetolactate synthase 976320 als 3777458 als Lactobacillus sakei subsp. sakei 23K acetolactate synthase YP_395593.1 974638 R 314315 CDS YP_395594.1 81428594 3777459 complement(976445..977323) 1 NC_007576.1 aldose-1-epimerase 977323 3777459 LSA0983 Lactobacillus sakei subsp. sakei 23K aldose-1-epimerase YP_395594.1 976445 R 314315 CDS YP_395595.1 81428595 3777460 complement(977346..978773) 1 NC_007576.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 978773 hslU 3777460 hslU Lactobacillus sakei subsp. sakei 23K ATP-dependent protease ATP-binding subunit HslU YP_395595.1 977346 R 314315 CDS YP_395596.1 81428596 3777461 complement(978777..979322) 1 NC_007576.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 979322 hslV 3777461 hslV Lactobacillus sakei subsp. sakei 23K ATP-dependent protease peptidase subunit YP_395596.1 978777 R 314315 CDS YP_395597.1 81428597 3777462 complement(979424..980335) 1 NC_007576.1 site-specific DNA-tyrosine recombinase, XerC 980335 xerC2 3777462 xerC2 Lactobacillus sakei subsp. sakei 23K site-specific DNA-tyrosine recombinase, XerC YP_395597.1 979424 R 314315 CDS YP_395598.1 81428598 3777463 complement(980403..980963) 1 NC_007576.1 hypothetical protein 980963 3777463 LSA0987 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395598.1 980403 R 314315 CDS YP_395599.1 81428599 3777464 complement(980941..981714) 1 NC_007576.1 hypothetical protein 981714 3777464 LSA0988 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395599.1 980941 R 314315 CDS YP_395600.1 81428600 3777465 complement(981736..983820) 1 NC_007576.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 983820 topA 3777465 topA Lactobacillus sakei subsp. sakei 23K DNA topoisomerase I YP_395600.1 981736 R 314315 CDS YP_395601.1 81428601 3777088 complement(984071..984505) 1 NC_007576.1 hypothetical protein 984505 3777088 LSA0990 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395601.1 984071 R 314315 CDS YP_395602.1 81428602 3777089 complement(984534..985400) 1 NC_007576.1 hypothetical protein 985400 3777089 LSA0991 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395602.1 984534 R 314315 CDS YP_395603.1 81428603 3777090 complement(985501..986367) 1 NC_007576.1 DprA/SMF family DNA processing protein 986367 3777090 LSA0992 Lactobacillus sakei subsp. sakei 23K DprA/SMF family DNA processing protein YP_395603.1 985501 R 314315 CDS YP_395604.1 81428604 3777091 complement(986422..987183) 1 NC_007576.1 ribonuclease HII (RNase HII) 987183 rnhB 3777091 rnhB Lactobacillus sakei subsp. sakei 23K ribonuclease HII (RNase HII) YP_395604.1 986422 R 314315 CDS YP_395605.1 81428605 3777092 complement(987185..988033) 1 NC_007576.1 GTP-binding protein 988033 3777092 LSA0994 Lactobacillus sakei subsp. sakei 23K GTP-binding protein YP_395605.1 987185 R 314315 CDS YP_395606.1 81428606 3777093 complement(988168..988698) 1 NC_007576.1 Signal peptidase I (leader peptidase I) 988698 sipA2 3777093 sipA2 Lactobacillus sakei subsp. sakei 23K Signal peptidase I (leader peptidase I) YP_395606.1 988168 R 314315 CDS YP_395607.1 81428607 3777094 complement(988723..988947) 1 NC_007576.1 hypothetical protein 988947 3777094 LSA0996 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395607.1 988723 R 314315 CDS YP_395608.1 81428608 3777095 complement(988958..989587) 1 NC_007576.1 hypothetical protein 989587 3777095 LSA0997 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395608.1 988958 R 314315 CDS YP_395609.1 81428609 3776932 complement(989600..990502) 1 NC_007576.1 extracellular lysophospholipase 990502 3776932 LSA0998 Lactobacillus sakei subsp. sakei 23K extracellular lysophospholipase YP_395609.1 989600 R 314315 CDS YP_395610.1 81428610 3776933 complement(990582..991442) 1 NC_007576.1 hypothetical protein 991442 3776933 LSA0999 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395610.1 990582 R 314315 CDS YP_395611.1 81428611 3776934 complement(991623..992123) 1 NC_007576.1 dihydrofolate reductase 992123 dfrA 3776934 dfrA Lactobacillus sakei subsp. sakei 23K dihydrofolate reductase YP_395611.1 991623 R 314315 CDS YP_395612.1 81428612 3776935 complement(992134..993084) 1 NC_007576.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 993084 thyA 3776935 thyA Lactobacillus sakei subsp. sakei 23K thymidylate synthase YP_395612.1 992134 R 314315 CDS YP_395613.1 81428613 3776936 complement(993280..995169) 1 NC_007576.1 drug resistance ABC transporter ATPase 995169 3776936 LSA1002 Lactobacillus sakei subsp. sakei 23K drug resistance ABC transporter ATPase YP_395613.1 993280 R 314315 CDS YP_395614.1 81428614 3776937 complement(995282..995743) 1 NC_007576.1 hypothetical protein 995743 3776937 LSA1003 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395614.1 995282 R 314315 CDS YP_395615.1 81428615 3776938 complement(995812..997005) 1 NC_007576.1 polynucleotide adenylyltransferase 997005 papS 3776938 papS Lactobacillus sakei subsp. sakei 23K polynucleotide adenylyltransferase YP_395615.1 995812 R 314315 CDS YP_395616.1 81428616 3776939 997153..998025 1 NC_007576.1 hypothetical protein 998025 3776939 LSA1005 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395616.1 997153 D 314315 CDS YP_395617.1 81428617 3778790 complement(998083..999114) 1 NC_007576.1 zinc-containing alcohol dehydrogenase (oxidoreductase) 999114 3778790 LSA1006 Lactobacillus sakei subsp. sakei 23K zinc-containing alcohol dehydrogenase (oxidoreductase) YP_395617.1 998083 R 314315 CDS YP_395618.1 81428618 3778791 999306..999671 1 NC_007576.1 hypothetical protein 999671 3778791 LSA1007 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395618.1 999306 D 314315 CDS YP_395619.1 81428619 3778792 complement(999769..1000377) 1 NC_007576.1 extracellular chitin-binding protein 1000377 3778792 LSA1008 Lactobacillus sakei subsp. sakei 23K extracellular chitin-binding protein YP_395619.1 999769 R 314315 CDS YP_395620.1 81428620 3778793 complement(1000541..1001233) 1 NC_007576.1 drug:H(+) antiporter (C-terminal fragment), authentic frameshift 1001233 3778793 LSA1009 Lactobacillus sakei subsp. sakei 23K drug:H(+) antiporter (C-terminal fragment), authentic frameshift YP_395620.1 1000541 R 314315 CDS YP_395621.1 81428621 3778794 complement(1001242..1001628) 1 NC_007576.1 drug:H(+) antiporter (N-terminal fragment), authentic frameshift 1001628 3778794 LSA1010 Lactobacillus sakei subsp. sakei 23K drug:H(+) antiporter (N-terminal fragment), authentic frameshift YP_395621.1 1001242 R 314315 CDS YP_395622.1 81428622 3778795 1001756..1002007 1 NC_007576.1 hypothetical protein 1002007 3778795 LSA1011 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395622.1 1001756 D 314315 CDS YP_395623.1 81428623 3778796 complement(1002043..1003299) 1 NC_007576.1 ABC transporter 1003299 3778796 LSA1012 Lactobacillus sakei subsp. sakei 23K ABC transporter YP_395623.1 1002043 R 314315 CDS YP_395624.1 81428624 3778797 complement(1003420..1004148) 1 NC_007576.1 ABC transporter ATP-binding protein 1004148 3778797 LSA1013 Lactobacillus sakei subsp. sakei 23K ABC transporter ATP-binding protein YP_395624.1 1003420 R 314315 CDS YP_395625.1 81428625 3777050 complement(1004278..1005543) 1 NC_007576.1 hypothetical protein 1005543 3777050 LSA1014 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395625.1 1004278 R 314315 CDS YP_395626.1 81428626 3777051 complement(1005637..1005912) 1 NC_007576.1 histone-like DNA-binding protein HU 1005912 hbsU 3777051 hbsU Lactobacillus sakei subsp. sakei 23K histone-like DNA-binding protein HU YP_395626.1 1005637 R 314315 CDS YP_395627.1 81428627 3777052 complement(1006119..1007429) 1 NC_007576.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1007429 engA 3777052 engA Lactobacillus sakei subsp. sakei 23K GTP-binding protein EngA YP_395627.1 1006119 R 314315 CDS YP_395628.1 81428628 3777053 complement(1007663..1008874) 1 NC_007576.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1008874 rpsA 3777053 rpsA Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S1 YP_395628.1 1007663 R 314315 CDS YP_395629.1 81428629 3777054 complement(1008969..1009628) 1 NC_007576.1 cytidylate kinase 1009628 cmk 3777054 cmk Lactobacillus sakei subsp. sakei 23K cytidylate kinase YP_395629.1 1008969 R 314315 CDS YP_395630.1 81428630 3777055 complement(1009695..1010396) 1 NC_007576.1 cell surface protein 1010396 3777055 LSA1019 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_395630.1 1009695 R 314315 CDS YP_395631.1 81428631 3777056 complement(1010465..1011910) 1 NC_007576.1 ATP-dependent DNA helicase RecQ 1011910 recQ1 3777056 recQ1 Lactobacillus sakei subsp. sakei 23K ATP-dependent DNA helicase RecQ YP_395631.1 1010465 R 314315 CDS YP_395632.1 81428632 3777057 complement(1011907..1012935) 1 NC_007576.1 hypothetical protein 1012935 3777057 LSA1021 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395632.1 1011907 R 314315 CDS YP_395633.1 81428633 3777058 1012972..1013202 1 NC_007576.1 ferredoxin 1013202 3777058 LSA1022 Lactobacillus sakei subsp. sakei 23K ferredoxin YP_395633.1 1012972 D 314315 CDS YP_395634.1 81428634 3777104 complement(1013280..1013855) 1 NC_007576.1 hypothetical protein 1013855 3777104 LSA1023 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395634.1 1013280 R 314315 CDS YP_395635.1 81428635 3777105 complement(1014170..1014940) 1 NC_007576.1 pseudouridylate synthase 1014940 rsuA1 3777105 rsuA1 Lactobacillus sakei subsp. sakei 23K pseudouridylate synthase YP_395635.1 1014170 R 314315 CDS YP_395636.1 81428636 3777106 complement(1014943..1015566) 1 NC_007576.1 segregation and condensation protein B 1015566 3777106 LSA1025 Lactobacillus sakei subsp. sakei 23K segregation and condensation protein B YP_395636.1 1014943 R 314315 CDS YP_395637.1 81428637 3777107 complement(1015550..1016305) 1 NC_007576.1 hypothetical protein 1016305 3777107 LSA1026 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395637.1 1015550 R 314315 CDS YP_395638.1 81428638 3777108 complement(1016314..1016682) 1 NC_007576.1 hypothetical protein 1016682 3777108 LSA1027 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395638.1 1016314 R 314315 CDS YP_395639.1 81428639 3777109 complement(1016756..1017640) 1 NC_007576.1 site-specific DNA tyrosine recombinase, XerD 1017640 XerD 3777109 XerD Lactobacillus sakei subsp. sakei 23K site-specific DNA tyrosine recombinase, XerD YP_395639.1 1016756 R 314315 CDS YP_395640.1 81428640 3777110 complement(1017652..1018170) 1 NC_007576.1 FUR family transcriptional regulator 1018170 3777110 LSA1029 Lactobacillus sakei subsp. sakei 23K FUR family transcriptional regulator YP_395640.1 1017652 R 314315 CDS YP_395641.1 81428641 3777111 complement(1018225..1019136) 1 NC_007576.1 hypothetical protein 1019136 3777111 LSA1030 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395641.1 1018225 R 314315 CDS YP_395642.1 81428642 3777200 complement(1019157..1019630) 1 NC_007576.1 hypothetical protein 1019630 3777200 LSA1031 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395642.1 1019157 R 314315 CDS YP_395643.1 81428643 3777201 complement(1019787..1021547) 1 NC_007576.1 pyruvate kinase 1021547 pyk 3777201 pyk Lactobacillus sakei subsp. sakei 23K pyruvate kinase YP_395643.1 1019787 R 314315 CDS YP_395644.1 81428644 3777202 complement(1021630..1022589) 1 NC_007576.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 1022589 pfk 3777202 pfk Lactobacillus sakei subsp. sakei 23K 6-phosphofructokinase YP_395644.1 1021630 R 314315 CDS YP_395645.1 81428645 3777203 complement(1022722..1026054) 1 NC_007576.1 DNA-directed DNA polymerase III subunit alpha 1026054 dnaE 3777203 dnaE Lactobacillus sakei subsp. sakei 23K DNA-directed DNA polymerase III subunit alpha YP_395645.1 1022722 R 314315 CDS YP_395646.1 81428646 3777204 1026177..1026353 1 NC_007576.1 small integral membrane protein 1026353 3777204 LSA1035 Lactobacillus sakei subsp. sakei 23K small integral membrane protein YP_395646.1 1026177 D 314315 CDS YP_395647.1 81428647 3777205 complement(1026404..1027279) 1 NC_007576.1 lipoprotein precursor 1027279 3777205 LSA1036 Lactobacillus sakei subsp. sakei 23K lipoprotein precursor YP_395647.1 1026404 R 314315 CDS YP_395648.1 81428648 3777206 complement(1027429..1028961) 1 NC_007576.1 amino acid/polyamine transport protein 1028961 3777206 LSA1037 Lactobacillus sakei subsp. sakei 23K amino acid/polyamine transport protein YP_395648.1 1027429 R 314315 CDS YP_395649.1 81428649 3777207 complement(1029159..1029713) 1 NC_007576.1 hypothetical protein 1029713 3777207 LSA1038 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395649.1 1029159 R 314315 CDS YP_395650.1 81428650 3777959 complement(1029820..1030002) 1 NC_007576.1 50S ribosomal protein L32 1030002 rpmF 3777959 rpmF Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L32 YP_395650.1 1029820 R 314315 CDS YP_395651.1 81428651 3777960 complement(1030369..1032963) 1 NC_007576.1 chaperone ClpB 1032963 clpB 3777960 clpB Lactobacillus sakei subsp. sakei 23K chaperone ClpB YP_395651.1 1030369 R 314315 CDS YP_395652.1 81428652 3777961 complement(1033138..1033536) 1 NC_007576.1 hypothetical protein 1033536 3777961 LSA1041 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395652.1 1033138 R 314315 CDS YP_395653.1 81428653 3777962 complement(1033545..1034354) 1 NC_007576.1 oxidoreductase 1034354 3777962 LSA1042 Lactobacillus sakei subsp. sakei 23K oxidoreductase YP_395653.1 1033545 R 314315 CDS YP_395654.1 81428654 3777963 complement(1034360..1035298) 1 NC_007576.1 ribonuclease Z 1035298 rnz 3777963 rnz Lactobacillus sakei subsp. sakei 23K ribonuclease Z YP_395654.1 1034360 R 314315 CDS YP_395655.1 81428655 3777964 complement(1035333..1037261) 1 NC_007576.1 acyltransferase 1037261 3777964 LSA1044 Lactobacillus sakei subsp. sakei 23K acyltransferase YP_395655.1 1035333 R 314315 CDS YP_395656.1 81428656 3777965 complement(1037400..1038692) 1 NC_007576.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1038692 obgE 3777965 obgE Lactobacillus sakei subsp. sakei 23K GTPase ObgE YP_395656.1 1037400 R 314315 CDS YP_395657.1 81428657 3777966 complement(1038851..1039945) 1 NC_007576.1 hypothetical protein 1039945 3777966 LSA1047 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395657.1 1038851 R 314315 CDS YP_395658.1 81428658 3777208 1040145..1040897 1 NC_007576.1 fructose operon transcription regulator 1040897 fruR 3777208 fruR Lactobacillus sakei subsp. sakei 23K fructose operon transcription regulator YP_395658.1 1040145 D 314315 CDS YP_395659.1 81428659 3777209 1040897..1041814 1 NC_007576.1 1-phosphofructokinase 1041814 fruK 3777209 fruK Lactobacillus sakei subsp. sakei 23K 1-phosphofructokinase YP_395659.1 1040897 D 314315 CDS YP_395660.1 81428660 3777210 1041839..1043773 1 NC_007576.1 fructose-specific phosphotransferase system, enzyme IIABC 1043773 fruA 3777210 fruA Lactobacillus sakei subsp. sakei 23K fructose-specific phosphotransferase system, enzyme IIABC YP_395660.1 1041839 D 314315 CDS YP_395661.1 81428661 3777211 complement(1043835..1046360) 1 NC_007576.1 excinuclease ABC subunit A 1046360 uvrA2 3777211 uvrA2 Lactobacillus sakei subsp. sakei 23K excinuclease ABC subunit A YP_395661.1 1043835 R 314315 CDS YP_395662.1 81428662 3777212 complement(1046415..1047254) 1 NC_007576.1 hypothetical protein 1047254 3777212 LSA1052 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395662.1 1046415 R 314315 CDS YP_395663.1 81428663 3777213 complement(1047385..1048413) 1 NC_007576.1 cinnamoyl-CoA reductase (oxidoreductase) 1048413 3777213 LSA1053 Lactobacillus sakei subsp. sakei 23K cinnamoyl-CoA reductase (oxidoreductase) YP_395663.1 1047385 R 314315 CDS YP_395664.1 81428664 3777214 1048526..1049107 1 NC_007576.1 TetR family transcriptional regulator 1049107 3777214 LSA1054 Lactobacillus sakei subsp. sakei 23K TetR family transcriptional regulator YP_395664.1 1048526 D 314315 CDS YP_395665.1 81428665 3777215 complement(1049141..1050919) 1 NC_007576.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1050919 uvrC 3777215 uvrC Lactobacillus sakei subsp. sakei 23K excinuclease ABC subunit C YP_395665.1 1049141 R 314315 CDS YP_395666.1 81428666 3777789 complement(1050999..1051730) 1 NC_007576.1 amino acid ABC transporter ATP-binding protein 1051730 3777789 LSA1056 Lactobacillus sakei subsp. sakei 23K amino acid ABC transporter ATP-binding protein YP_395666.1 1050999 R 314315 CDS YP_395667.1 81428667 3777790 complement(1051723..1053186) 1 NC_007576.1 amino acid ABC transporter permease/substrate-binding protein 1053186 3777790 LSA1057 Lactobacillus sakei subsp. sakei 23K amino acid ABC transporter permease/substrate-binding protein YP_395667.1 1051723 R 314315 CDS YP_395668.1 81428668 3777791 1053321..1053473 1 NC_007576.1 hypothetical protein 1053473 3777791 LSA1058 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395668.1 1053321 D 314315 CDS YP_395669.1 81428669 3777792 complement(1053548..1053841) 1 NC_007576.1 nucleoside pyrophosphatase 1053841 3777792 LSA1059 Lactobacillus sakei subsp. sakei 23K nucleoside pyrophosphatase YP_395669.1 1053548 R 314315 CDS YP_395670.1 81428670 3777793 complement(1053841..1054440) 1 NC_007576.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 1054440 engB 3777793 engB Lactobacillus sakei subsp. sakei 23K ribosome biogenesis GTP-binding protein YsxC YP_395670.1 1053841 R 314315 CDS YP_395671.1 81428671 3777794 complement(1054588..1055841) 1 NC_007576.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1055841 clpX 3777794 clpX Lactobacillus sakei subsp. sakei 23K ATP-dependent protease ATP-binding subunit ClpX YP_395671.1 1054588 R 314315 CDS YP_395672.1 81428672 3777795 complement(1056051..1057346) 1 NC_007576.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1057346 tig 3777795 tig Lactobacillus sakei subsp. sakei 23K trigger factor YP_395672.1 1056051 R 314315 CDS YP_395673.1 81428673 3777796 complement(1057557..1058747) 1 NC_007576.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1058747 tuf 3777796 tuf Lactobacillus sakei subsp. sakei 23K elongation factor Tu YP_395673.1 1057557 R 314315 CDS YP_395674.1 81428674 3777216 complement(1058970..1059917) 1 NC_007576.1 hypothetical protein 1059917 3777216 LSA1064 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395674.1 1058970 R 314315 CDS YP_395675.1 81428675 3777217 complement(1060006..1061724) 1 NC_007576.1 metallo-beta-lactamase hydrolase 1061724 3777217 LSA1065 Lactobacillus sakei subsp. sakei 23K metallo-beta-lactamase hydrolase YP_395675.1 1060006 R 314315 CDS YP_395676.1 81428676 3777218 complement(1061953..1062222) 1 NC_007576.1 30S ribosomal protein S15 1062222 rpsO 3777218 rpsO Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S15 YP_395676.1 1061953 R 314315 CDS YP_395677.1 81428677 3777219 1062501..1062755 1 NC_007576.1 30S ribosomal protein S20 1062755 rpsT 3777219 rpsT Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S20 YP_395677.1 1062501 D 314315 CDS YP_395678.1 81428678 3777220 complement(1062824..1063852) 1 NC_007576.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 1063852 holA 3777220 holA Lactobacillus sakei subsp. sakei 23K DNA polymerase III subunit delta YP_395678.1 1062824 R 314315 CDS YP_395679.1 81428679 3777221 complement(1063849..1066116) 1 NC_007576.1 type II secretion/competence system protein ComEC-like protein 1066116 3777221 LSA1069 Lactobacillus sakei subsp. sakei 23K type II secretion/competence system protein ComEC-like protein YP_395679.1 1063849 R 314315 CDS YP_395680.1 81428680 3777222 complement(1066113..1066601) 1 NC_007576.1 type II secretion/competence system, dCMP deaminase ComEB-like 1066601 3777222 LSA1070 Lactobacillus sakei subsp. sakei 23K type II secretion/competence system, dCMP deaminase ComEB-like YP_395680.1 1066113 R 314315 CDS YP_395681.1 81428681 3777223 complement(1066659..1067363) 1 NC_007576.1 type II secretion/competence system protein ComEA-like protein 1067363 3777223 LSA1071 Lactobacillus sakei subsp. sakei 23K type II secretion/competence system protein ComEA-like protein YP_395681.1 1066659 R 314315 CDS YP_395682.1 81428682 3778571 complement(1067438..1068484) 1 NC_007576.1 lipoprotein precursor 1068484 3778571 LSA1072 Lactobacillus sakei subsp. sakei 23K lipoprotein precursor YP_395682.1 1067438 R 314315 CDS YP_395683.1 81428683 3778572 complement(1068486..1068983) 1 NC_007576.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 1068983 coaD 3778572 coaD Lactobacillus sakei subsp. sakei 23K phosphopantetheine adenylyltransferase YP_395683.1 1068486 R 314315 CDS YP_395684.1 81428684 3778573 complement(1068996..1069550) 1 NC_007576.1 adenine-specific DNA methyltransferase 1069550 3778573 LSA1074 Lactobacillus sakei subsp. sakei 23K adenine-specific DNA methyltransferase YP_395684.1 1068996 R 314315 CDS YP_395685.1 81428685 3778574 complement(1069555..1069845) 1 NC_007576.1 hypothetical protein 1069845 3778574 LSA1075 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395685.1 1069555 R 314315 CDS YP_395686.1 81428686 3778575 complement(1069869..1070957) 1 NC_007576.1 hypothetical protein 1070957 3778575 LSA1076 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395686.1 1069869 R 314315 CDS YP_395687.1 81428687 3778576 complement(1070968..1072155) 1 NC_007576.1 integral membrane cell division protein, FtsW 1072155 ftsW 3778576 ftsW Lactobacillus sakei subsp. sakei 23K integral membrane cell division protein, FtsW YP_395687.1 1070968 R 314315 CDS YP_395688.1 81428688 3778577 complement(1072164..1072460) 1 NC_007576.1 depletion of this protein in Bacillus subtilis results in defects in cell morphology; crystal structure of Staphylococcus protein shows homodimer; ligand binding protein; hypothetical protein 1072460 3778577 LSA1078 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395688.1 1072164 R 314315 CDS YP_395689.1 81428689 3778578 complement(1072581..1074416) 1 NC_007576.1 GTP-binding protein TypA 1074416 3778578 LSA1079 Lactobacillus sakei subsp. sakei 23K GTP-binding protein TypA YP_395689.1 1072581 R 314315 CDS YP_395690.1 81428690 3778579 complement(1074562..1075359) 1 NC_007576.1 myo-inositol monophosphatase 1075359 3778579 LSA1080 Lactobacillus sakei subsp. sakei 23K myo-inositol monophosphatase YP_395690.1 1074562 R 314315 CDS YP_395691.1 81428691 3777256 complement(1075376..1075660) 1 NC_007576.1 hypothetical protein 1075660 3777256 LSA1081 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395691.1 1075376 R 314315 CDS YP_395692.1 81428692 3777257 complement(1075805..1077211) 1 NC_007576.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1077211 pdhD 3777257 pdhD Lactobacillus sakei subsp. sakei 23K dihydrolipoamide dehydrogenase YP_395692.1 1075805 R 314315 CDS YP_395693.1 81428693 3777258 complement(1077219..1078841) 1 NC_007576.1 dihydrolipoamide acetyltransferase 1078841 pdhC 3777258 pdhC Lactobacillus sakei subsp. sakei 23K dihydrolipoamide acetyltransferase YP_395693.1 1077219 R 314315 CDS YP_395694.1 81428694 3777259 complement(1078871..1079869) 1 NC_007576.1 pyruvate dehydrogenase complex, E1 component subunit beta 1079869 pdhB 3777259 pdhB Lactobacillus sakei subsp. sakei 23K pyruvate dehydrogenase complex, E1 component subunit beta YP_395694.1 1078871 R 314315 CDS YP_395695.1 81428695 3777260 complement(1079850..1080959) 1 NC_007576.1 pyruvate dehydrogenase complex, E1 component subunit alpha 1080959 pdhA 3777260 pdhA Lactobacillus sakei subsp. sakei 23K pyruvate dehydrogenase complex, E1 component subunit alpha YP_395695.1 1079850 R 314315 CDS YP_395696.1 81428696 3777261 complement(1081282..1081965) 1 NC_007576.1 hypothetical protein 1081965 3777261 LSA1086 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395696.1 1081282 R 314315 CDS YP_395697.1 81428697 3777262 1082468..1083025 1 NC_007576.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1083025 def 3777262 def Lactobacillus sakei subsp. sakei 23K peptide deformylase YP_395697.1 1082468 D 314315 CDS YP_395698.1 81428698 3777263 complement(1083074..1084822) 1 NC_007576.1 multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunits 1084822 3777263 LSA1088 Lactobacillus sakei subsp. sakei 23K multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunits YP_395698.1 1083074 R 314315 CDS YP_395699.1 81428699 3777272 complement(1084824..1086563) 1 NC_007576.1 multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunits 1086563 3777272 LSA1089 Lactobacillus sakei subsp. sakei 23K multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunits YP_395699.1 1084824 R 314315 CDS YP_395700.1 81428700 3777273 complement(1086591..1087076) 1 NC_007576.1 hypothetical protein 1087076 3777273 LSA1090 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395700.1 1086591 R 314315 CDS YP_395701.1 81428701 3777274 1087273..1087485 1 NC_007576.1 hypothetical protein 1087485 3777274 LSA1091 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395701.1 1087273 D 314315 CDS YP_395702.1 81428702 3777275 1087490..1089178 1 NC_007576.1 metallo-beta-lactamase hydrolase 1089178 3777275 LSA1092 Lactobacillus sakei subsp. sakei 23K metallo-beta-lactamase hydrolase YP_395702.1 1087490 D 314315 CDS YP_395703.1 81428703 3777276 1089312..1090277 1 NC_007576.1 hypothetical protein 1090277 3777276 LSA1093 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395703.1 1089312 D 314315 CDS YP_395704.1 81428704 3777277 complement(1090309..1090815) 1 NC_007576.1 hypothetical protein 1090815 3777277 LSA1094 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395704.1 1090309 R 314315 CDS YP_395705.1 81428705 3777278 complement(1090808..1091491) 1 NC_007576.1 TENA/THI-4 family transcriptional activator 1091491 3777278 LSA1095 Lactobacillus sakei subsp. sakei 23K TENA/THI-4 family transcriptional activator YP_395705.1 1090808 R 314315 CDS YP_395706.1 81428706 3777279 complement(1092061..1092219) 1 NC_007576.1 hypothetical protein 1092219 3777279 LSA1096 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395706.1 1092061 R 314315 CDS YP_395707.1 81428707 3777349 complement(1092343..1092843) 1 NC_007576.1 ADP-ribose phosphorylase 1092843 3777349 LSA1097 Lactobacillus sakei subsp. sakei 23K ADP-ribose phosphorylase YP_395707.1 1092343 R 314315 CDS YP_395708.1 81428708 3777350 complement(1092840..1093925) 1 NC_007576.1 dihydropteroate synthase 1093925 folP 3777350 folP Lactobacillus sakei subsp. sakei 23K dihydropteroate synthase YP_395708.1 1092840 R 314315 CDS YP_395709.1 81428709 3777351 complement(1093936..1095243) 1 NC_007576.1 folylpolyglutamate synthase 1095243 folC2 3777351 folC2 Lactobacillus sakei subsp. sakei 23K folylpolyglutamate synthase YP_395709.1 1093936 R 314315 CDS YP_395710.1 81428710 3777352 complement(1095255..1095824) 1 NC_007576.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1095824 folE 3777352 folE Lactobacillus sakei subsp. sakei 23K GTP cyclohydrolase I YP_395710.1 1095255 R 314315 CDS YP_395711.1 81428711 3777353 complement(1095796..1096326) 1 NC_007576.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1096326 folK 3777353 folK Lactobacillus sakei subsp. sakei 23K 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_395711.1 1095796 R 314315 CDS YP_395712.1 81428712 3777354 complement(1096323..1096673) 1 NC_007576.1 dihydroneopterin aldolase 1096673 folB 3777354 folB Lactobacillus sakei subsp. sakei 23K dihydroneopterin aldolase YP_395712.1 1096323 R 314315 CDS YP_395713.1 81428713 3777355 1097022..1097450 1 NC_007576.1 GNAT family acetyltransferase 1097450 3777355 LSA1103 Lactobacillus sakei subsp. sakei 23K GNAT family acetyltransferase YP_395713.1 1097022 D 314315 CDS YP_395714.1 81428714 3777356 complement(1097506..1097793) 1 NC_007576.1 hypothetical protein 1097793 3777356 LSA1104 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395714.1 1097506 R 314315 CDS YP_395715.1 81428715 3777442 1097978..1098184 1 NC_007576.1 hypothetical protein 1098184 3777442 LSA1105 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395715.1 1097978 D 314315 CDS YP_395716.1 81428716 3777443 1098481..1098639 1 NC_007576.1 hypothetical protein 1098639 3777443 LSA1107 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395716.1 1098481 D 314315 CDS YP_395717.1 81428717 3777444 1098748..1100109 1 NC_007576.1 chromosome segregation ATPase 1100109 3777444 LSA1108 Lactobacillus sakei subsp. sakei 23K chromosome segregation ATPase YP_395717.1 1098748 D 314315 CDS YP_395718.1 81428718 3777445 complement(1100161..1101564) 1 NC_007576.1 iron/sulfur ABC transporter 1101564 3777445 LSA1109 Lactobacillus sakei subsp. sakei 23K iron/sulfur ABC transporter YP_395718.1 1100161 R 314315 CDS YP_395719.1 81428719 3777446 complement(1101564..1102052) 1 NC_007576.1 NifU-like protein 1102052 3777446 LSA1110 Lactobacillus sakei subsp. sakei 23K NifU-like protein YP_395719.1 1101564 R 314315 CDS YP_395720.1 81428720 3777447 complement(1102039..1103277) 1 NC_007576.1 cysteine desulfurase 1103277 3777447 LSA1111 Lactobacillus sakei subsp. sakei 23K cysteine desulfurase YP_395720.1 1102039 R 314315 CDS YP_395721.1 81428721 3777448 complement(1103255..1104559) 1 NC_007576.1 iron/sulfur ABC transporter 1104559 3777448 LSA1112 Lactobacillus sakei subsp. sakei 23K iron/sulfur ABC transporter YP_395721.1 1103255 R 314315 CDS YP_395722.1 81428722 3777449 complement(1104572..1105354) 1 NC_007576.1 ABC transporter 1105354 3777449 LSA1113 Lactobacillus sakei subsp. sakei 23K ABC transporter YP_395722.1 1104572 R 314315 CDS YP_395723.1 81428723 3777491 complement(1105524..1106339) 1 NC_007576.1 methionine ABC transporter substrate-binding protein 1106339 3777491 LSA1114 Lactobacillus sakei subsp. sakei 23K methionine ABC transporter substrate-binding protein YP_395723.1 1105524 R 314315 CDS YP_395724.1 81428724 3777492 complement(1106359..1107048) 1 NC_007576.1 methionine ABC transporter transmembrane protein 1107048 3777492 LSA1115 Lactobacillus sakei subsp. sakei 23K methionine ABC transporter transmembrane protein YP_395724.1 1106359 R 314315 CDS YP_395725.1 81428725 3777493 complement(1107041..1108075) 1 NC_007576.1 methionine ABC transporter ATP-binding protein 1108075 3777493 LSA1116 Lactobacillus sakei subsp. sakei 23K methionine ABC transporter ATP-binding protein YP_395725.1 1107041 R 314315 CDS YP_395726.1 81428726 3777494 complement(1108427..1108735) 1 NC_007576.1 glycine cleavage system protein T 1108735 3777494 LSA1117 Lactobacillus sakei subsp. sakei 23K glycine cleavage system protein T YP_395726.1 1108427 R 314315 CDS YP_395727.1 81428727 3777495 complement(1108754..1109953) 1 NC_007576.1 rod-shape determining protein 1109953 3777495 LSA1118 Lactobacillus sakei subsp. sakei 23K rod-shape determining protein YP_395727.1 1108754 R 314315 CDS YP_395728.1 81428728 3777496 complement(1110047..1110277) 1 NC_007576.1 hypothetical protein 1110277 3777496 LSA1119 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395728.1 1110047 R 314315 CDS YP_395729.1 81428729 3777497 complement(1110307..1110555) 1 NC_007576.1 hypothetical protein 1110555 3777497 LSA1120 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395729.1 1110307 R 314315 CDS YP_395730.1 81428730 3777498 complement(1110577..1110759) 1 NC_007576.1 extracellular peptide 1110759 3777498 LSA1121 Lactobacillus sakei subsp. sakei 23K extracellular peptide YP_395730.1 1110577 R 314315 CDS YP_395731.1 81428731 3777641 complement(1110786..1111775) 1 NC_007576.1 rod shape-determining protein MreB 1111775 mbl 3777641 mbl Lactobacillus sakei subsp. sakei 23K rod shape-determining protein MreB YP_395731.1 1110786 R 314315 CDS YP_395732.1 81428732 3777642 complement(1111924..1113225) 1 NC_007576.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1113225 murA1 3777642 murA1 Lactobacillus sakei subsp. sakei 23K UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_395732.1 1111924 R 314315 CDS YP_395733.1 81428733 3777643 complement(1113253..1113486) 1 NC_007576.1 hypothetical protein 1113486 3777643 LSA1124 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395733.1 1113253 R 314315 CDS YP_395734.1 81428734 3777644 complement(1113647..1114084) 1 NC_007576.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; ATP synthase F0F1 subunit epsilon 1114084 atpC 3777644 atpC Lactobacillus sakei subsp. sakei 23K ATP synthase F0F1 subunit epsilon YP_395734.1 1113647 R 314315 CDS YP_395735.1 81428735 3777645 complement(1114097..1115548) 1 NC_007576.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 1115548 atpD 3777645 atpD Lactobacillus sakei subsp. sakei 23K ATP synthase F0F1 subunit beta YP_395735.1 1114097 R 314315 CDS YP_395736.1 81428736 3777646 complement(1115551..1116498) 1 NC_007576.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma 1116498 atpG 3777646 atpG Lactobacillus sakei subsp. sakei 23K ATP synthase F0F1 subunit gamma YP_395736.1 1115551 R 314315 CDS YP_395737.1 81428737 3777647 complement(1116511..1118046) 1 NC_007576.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 1118046 atpA 3777647 atpA Lactobacillus sakei subsp. sakei 23K ATP synthase F0F1 subunit alpha YP_395737.1 1116511 R 314315 CDS YP_395738.1 81428738 3777648 complement(1118074..1118616) 1 NC_007576.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta 1118616 atpH 3777648 atpH Lactobacillus sakei subsp. sakei 23K ATP synthase F0F1 subunit delta YP_395738.1 1118074 R 314315 CDS YP_395739.1 81428739 3777681 complement(1118603..1119124) 1 NC_007576.1 H(+)-transporting two-sector ATPase (ATP synthase), B subunit 1119124 atpF 3777681 atpF Lactobacillus sakei subsp. sakei 23K H(+)-transporting two-sector ATPase (ATP synthase), B subunit YP_395739.1 1118603 R 314315 CDS YP_395740.1 81428740 3777682 complement(1119187..1119399) 1 NC_007576.1 H(+)-transporting two-sector ATPase (ATP synthase), C subunit 1119399 atpE 3777682 atpE Lactobacillus sakei subsp. sakei 23K H(+)-transporting two-sector ATPase (ATP synthase), C subunit YP_395740.1 1119187 R 314315 CDS YP_395741.1 81428741 3777683 complement(1119418..1120131) 1 NC_007576.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 1120131 atpB 3777683 atpB Lactobacillus sakei subsp. sakei 23K ATP synthase F0F1 subunit A YP_395741.1 1119418 R 314315 CDS YP_395742.1 81428742 3777684 complement(1120440..1121069) 1 NC_007576.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 1121069 upp 3777684 upp Lactobacillus sakei subsp. sakei 23K uracil phosphoribosyltransferase YP_395742.1 1120440 R 314315 CDS YP_395743.1 81428743 3777685 complement(1121227..1122474) 1 NC_007576.1 glycine/Serine hydroxymethyltransferase 1122474 glyA 3777685 glyA Lactobacillus sakei subsp. sakei 23K glycine/Serine hydroxymethyltransferase YP_395743.1 1121227 R 314315 CDS YP_395744.1 81428744 3777686 complement(1122560..1123588) 1 NC_007576.1 Sua5 family translation factor 1123588 3777686 LSA1135 Lactobacillus sakei subsp. sakei 23K Sua5 family translation factor YP_395744.1 1122560 R 314315 CDS YP_395745.1 81428745 3777687 complement(1123618..1124487) 1 NC_007576.1 protoporphyrinogen oxidase 1124487 3777687 LSA1136 Lactobacillus sakei subsp. sakei 23K protoporphyrinogen oxidase YP_395745.1 1123618 R 314315 CDS YP_395746.1 81428746 3777688 complement(1124465..1125562) 1 NC_007576.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 1125562 prfA 3777688 prfA Lactobacillus sakei subsp. sakei 23K peptide chain release factor 1 YP_395746.1 1124465 R 314315 CDS YP_395747.1 81428747 3777689 complement(1125569..1126162) 1 NC_007576.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 1126162 tdk 3777689 tdk Lactobacillus sakei subsp. sakei 23K thymidine kinase YP_395747.1 1125569 R 314315 CDS YP_395748.1 81428748 3777740 1126340..1127689 1 NC_007576.1 UDP-N-acetylmuramyl peptide synthetase 1127689 3777740 LSA1139 Lactobacillus sakei subsp. sakei 23K UDP-N-acetylmuramyl peptide synthetase YP_395748.1 1126340 D 314315 CDS YP_395749.1 81428749 3777741 1127686..1128429 1 NC_007576.1 glutamine amidotransferase 1128429 3777741 LSA1140 Lactobacillus sakei subsp. sakei 23K glutamine amidotransferase YP_395749.1 1127686 D 314315 CDS YP_395750.1 81428750 3777742 complement(1128491..1131112) 1 NC_007576.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 1131112 ppdK 3777742 ppdK Lactobacillus sakei subsp. sakei 23K pyruvate phosphate dikinase YP_395750.1 1128491 R 314315 CDS YP_395751.1 81428751 3777743 1131285..1131908 1 NC_007576.1 hypothetical protein 1131908 3777743 LSA1142 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395751.1 1131285 D 314315 CDS YP_395752.1 81428752 3777744 1131928..1132725 1 NC_007576.1 hypothetical protein 1132725 3777744 LSA1143 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395752.1 1131928 D 314315 CDS YP_395753.1 81428753 3777745 1132847..1133092 1 NC_007576.1 hypothetical protein 1133092 3777745 LSA1144 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395753.1 1132847 D 314315 CDS YP_395754.1 81428754 3777746 complement(1133142..1133786) 1 NC_007576.1 metal-dependent phosphohydrolase 1133786 3777746 LSA1145 Lactobacillus sakei subsp. sakei 23K metal-dependent phosphohydrolase YP_395754.1 1133142 R 314315 CDS YP_395755.1 81428755 3777747 complement(1133860..1134834) 1 NC_007576.1 mannose-6-phosphate isomerase 1134834 manA 3777747 manA Lactobacillus sakei subsp. sakei 23K mannose-6-phosphate isomerase YP_395755.1 1133860 R 314315 CDS YP_395756.1 81428756 3777748 complement(1134936..1135946) 1 NC_007576.1 hypothetical protein 1135946 3777748 LSA1147 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395756.1 1134936 R 314315 CDS YP_395757.1 81428757 3777749 complement(1136044..1137921) 1 NC_007576.1 multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunits 1137921 3777749 LSA1148 Lactobacillus sakei subsp. sakei 23K multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunits YP_395757.1 1136044 R 314315 CDS YP_395758.1 81428758 3777750 complement(1137921..1139651) 1 NC_007576.1 multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunit 1139651 3777750 LSA1149 Lactobacillus sakei subsp. sakei 23K multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunit YP_395758.1 1137921 R 314315 CDS YP_395759.1 81428759 3777751 complement(1139675..1140316) 1 NC_007576.1 TetR family transcriptional regulator 1140316 3777751 LSA1150 Lactobacillus sakei subsp. sakei 23K TetR family transcriptional regulator YP_395759.1 1139675 R 314315 CDS YP_395760.1 81428760 3777752 1140521..1141249 1 NC_007576.1 potassium/ion channel protein 1141249 3777752 LSA1151 Lactobacillus sakei subsp. sakei 23K potassium/ion channel protein YP_395760.1 1140521 D 314315 CDS YP_395761.1 81428761 3777753 complement(1141271..1142191) 1 NC_007576.1 IS30 family transposase 1142191 tnpA3-ISLsa1 3777753 tnpA3-ISLsa1 Lactobacillus sakei subsp. sakei 23K IS30 family transposase YP_395761.1 1141271 R 314315 CDS YP_395762.1 81428762 3777754 complement(1142484..1142684) 1 NC_007576.1 cold shock protein CspA family protein 1142684 csp2 3777754 csp2 Lactobacillus sakei subsp. sakei 23K cold shock protein CspA family protein YP_395762.1 1142484 R 314315 CDS YP_395763.1 81428763 3777755 1142886..1143542 1 NC_007576.1 hypothetical protein 1143542 3777755 LSA1153 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395763.1 1142886 D 314315 CDS YP_395764.1 81428764 3777765 1143563..1143883 1 NC_007576.1 hypothetical protein 1143883 3777765 LSA1154 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395764.1 1143563 D 314315 CDS YP_395765.1 81428765 3777766 1143876..1144058 1 NC_007576.1 hypothetical protein 1144058 3777766 LSA1155 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395765.1 1143876 D 314315 CDS YP_395766.1 81428766 3777767 complement(1144055..1144750) 1 NC_007576.1 hypothetical protein 1144750 3777767 LSA1156 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395766.1 1144055 R 314315 CDS YP_395767.1 81428767 3777768 complement(1144834..1145256) 1 NC_007576.1 catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 1145256 mgsA 3777768 mgsA Lactobacillus sakei subsp. sakei 23K methylglyoxal synthase YP_395767.1 1144834 R 314315 CDS YP_395768.1 81428768 3777769 complement(1145268..1146029) 1 NC_007576.1 hypothetical protein 1146029 3777769 LSA1158 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395768.1 1145268 R 314315 CDS YP_395769.1 81428769 3777770 complement(1146170..1146865) 1 NC_007576.1 cell surface protein 1146865 3777770 LSA1159 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_395769.1 1146170 R 314315 CDS YP_395770.1 81428770 3777771 complement(1147580..1147831) 1 NC_007576.1 hypothetical protein 1147831 3776855 LSA1160 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395770.1 1147580 R 314315 CDS YP_395771.1 81428771 3777772 complement(1148058..1148432) 1 NC_007576.1 hypothetical protein 1148432 3777772 LSA1161 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395771.1 1148058 R 314315 CDS YP_395772.1 81428772 3777773 complement(1148425..1149729) 1 NC_007576.1 DNA-repair protein (SOS response UmuC-like protein) 1149729 3777773 LSA1162 Lactobacillus sakei subsp. sakei 23K DNA-repair protein (SOS response UmuC-like protein) YP_395772.1 1148425 R 314315 CDS YP_395773.1 81428773 3777774 complement(1149729..1149974) 1 NC_007576.1 hypothetical protein 1149974 3777774 LSA1163 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395773.1 1149729 R 314315 CDS YP_395774.1 81428774 3777775 complement(1149994..1150368) 1 NC_007576.1 hypothetical protein 1150368 3777775 LSA1164 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395774.1 1149994 R 314315 CDS YP_395775.1 81428775 3777776 complement(1150395..1151120) 1 NC_007576.1 cell surface protein 1151120 3777776 LSA1165 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_395775.1 1150395 R 314315 CDS YP_395776.1 81428776 3777777 complement(1151363..1153405) 1 NC_007576.1 potassium transport protein 1153405 3777777 LSA1166 Lactobacillus sakei subsp. sakei 23K potassium transport protein YP_395776.1 1151363 R 314315 CDS YP_395777.1 81428777 3777778 1153563..1153736 1 NC_007576.1 hypothetical protein 1153736 3777778 LSA1167 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395777.1 1153563 D 314315 CDS YP_395778.1 81428778 3777779 1153869..1154348 1 NC_007576.1 nucleoside deoxyribosyltransferase 1154348 3777779 LSA1168 Lactobacillus sakei subsp. sakei 23K nucleoside deoxyribosyltransferase YP_395778.1 1153869 D 314315 CDS YP_395779.1 81428779 3777780 complement(1154400..1155773) 1 NC_007576.1 6-phospho-beta-glucosidase 1155773 3777780 LSA1169 Lactobacillus sakei subsp. sakei 23K 6-phospho-beta-glucosidase YP_395779.1 1154400 R 314315 CDS YP_395780.1 81428780 3778513 complement(1156123..1156842) 1 NC_007576.1 MIP family facilitator protein 1156842 3778513 LSA1170 Lactobacillus sakei subsp. sakei 23K MIP family facilitator protein YP_395780.1 1156123 R 314315 CDS YP_395781.1 81428781 3778514 1157058..1157732 1 NC_007576.1 hypothetical protein 1157732 3778514 LSA1171 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395781.1 1157058 D 314315 CDS YP_395782.1 81428782 3778515 1157854..1158546 1 NC_007576.1 lipoprotein precursor 1158546 3778515 LSA1172 Lactobacillus sakei subsp. sakei 23K lipoprotein precursor YP_395782.1 1157854 D 314315 CDS YP_395783.1 81428783 3778516 1158773..1159207 1 NC_007576.1 universal stress protein UspA family protein 1159207 usp4 3778516 usp4 Lactobacillus sakei subsp. sakei 23K universal stress protein UspA family protein YP_395783.1 1158773 D 314315 CDS YP_395784.1 81428784 3778517 1159464..1159607 1 NC_007576.1 hypothetical protein 1159607 3778517 LSA1174 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395784.1 1159464 D 314315 CDS YP_395785.1 81428785 3778518 1159747..1159953 1 NC_007576.1 hypothetical protein 1159953 3778518 LSA1175 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395785.1 1159747 D 314315 CDS YP_395786.1 81428786 3778519 1160018..1160605 1 NC_007576.1 hypothetical protein 1160605 3778519 LSA1176 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395786.1 1160018 D 314315 CDS YP_395787.1 81428787 3778520 1160627..1161355 1 NC_007576.1 lipoprotein precursor 1161355 3778520 LSA1177 Lactobacillus sakei subsp. sakei 23K lipoprotein precursor YP_395787.1 1160627 D 314315 CDS YP_395788.1 81428788 3778563 1161377..1161688 1 NC_007576.1 hypothetical protein 1161688 3778563 LSA1178 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395788.1 1161377 D 314315 CDS YP_395789.1 81428789 3778564 complement(1161804..1163150) 1 NC_007576.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 1163150 pgi 3778564 pgi Lactobacillus sakei subsp. sakei 23K glucose-6-phosphate isomerase YP_395789.1 1161804 R 314315 CDS YP_395790.1 81428790 3778565 1163252..1163500 1 NC_007576.1 IS4 family transposase 1163500 tnpA-ISLsa3 3778565 tnpA-ISLsa3 Lactobacillus sakei subsp. sakei 23K IS4 family transposase YP_395790.1 1163252 D 314315 CDS YP_395791.1 81428791 3778566 1163443..1164225 1 NC_007576.1 IS4 family transposase 1164225 tnpB-ISLsa3 3778566 tnpB-ISLsa3 Lactobacillus sakei subsp. sakei 23K IS4 family transposase YP_395791.1 1163443 D 314315 CDS YP_395792.1 81428792 3778567 complement(1165062..1165688) 1 NC_007576.1 cytochrome P450 (C-terminal fragment), truncated 1165688 3778567 LSA1182 Lactobacillus sakei subsp. sakei 23K cytochrome P450 (C-terminal fragment), truncated YP_395792.1 1165062 R 314315 CDS YP_395793.1 81428793 3778568 1165708..1165959 1 NC_007576.1 IS3 family transposase 1165959 tnpA4-IS1520 3778568 tnpA4-IS1520 Lactobacillus sakei subsp. sakei 23K IS3 family transposase YP_395793.1 1165708 D 314315 CDS YP_395794.1 81428794 3778569 1165980..1166777 1 NC_007576.1 IS3 family transposase 1166777 tnpB4-IS1520 3778569 tnpB4-IS1520 Lactobacillus sakei subsp. sakei 23K IS3 family transposase YP_395794.1 1165980 D 314315 CDS YP_395795.1 81428795 3778570 complement(1166874..1167626) 1 NC_007576.1 cytochrome P450 (N-terminal fragment), truncated 1167626 3778570 LSA1183_c Lactobacillus sakei subsp. sakei 23K cytochrome P450 (N-terminal fragment), truncated YP_395795.1 1166874 R 314315 CDS YP_395797.1 81428797 3778588 1168173..1169174 1 NC_007576.1 ABC transporter substrate-binding protein 1169174 3778588 LSA1185 Lactobacillus sakei subsp. sakei 23K ABC transporter substrate-binding protein YP_395797.1 1168173 D 314315 CDS YP_395798.1 81428798 3778589 1169171..1170034 1 NC_007576.1 ABC transporter 1170034 3778589 LSA1186 Lactobacillus sakei subsp. sakei 23K ABC transporter YP_395798.1 1169171 D 314315 CDS YP_395799.1 81428799 3778590 1170031..1170789 1 NC_007576.1 ABC transporter ATP-binding protein 1170789 3778590 LSA1187 Lactobacillus sakei subsp. sakei 23K ABC transporter ATP-binding protein YP_395799.1 1170031 D 314315 CDS YP_395800.1 81428800 3778591 1170993..1172828 1 NC_007576.1 pyruvate oxidase 1172828 pox1 3778591 pox1 Lactobacillus sakei subsp. sakei 23K pyruvate oxidase YP_395800.1 1170993 D 314315 CDS YP_395801.1 81428801 3778592 complement(1172944..1173639) 1 NC_007576.1 hypothetical protein 1173639 3778592 LSA1189 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395801.1 1172944 R 314315 CDS YP_395802.1 81428802 3778593 complement(1173944..1174264) 1 NC_007576.1 4-carboxymuconolactone decarboxylase 1174264 3778593 LSA1190 Lactobacillus sakei subsp. sakei 23K 4-carboxymuconolactone decarboxylase YP_395802.1 1173944 R 314315 CDS YP_395803.1 81428803 3778594 complement(1174280..1174693) 1 NC_007576.1 hypothetical protein 1174693 3778594 LSA1191 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395803.1 1174280 R 314315 CDS YP_395804.1 81428804 3778595 complement(1174712..1175131) 1 NC_007576.1 MerR family transcriptional regulator 1175131 3778595 LSA1192 Lactobacillus sakei subsp. sakei 23K MerR family transcriptional regulator YP_395804.1 1174712 R 314315 CDS YP_395805.1 81428805 3778604 complement(1175147..1175785) 1 NC_007576.1 oxidoreductase 1175785 3778604 LSA1193 Lactobacillus sakei subsp. sakei 23K oxidoreductase YP_395805.1 1175147 R 314315 CDS YP_395806.1 81428806 3778605 1175960..1176640 1 NC_007576.1 hypothetical protein 1176640 3778605 LSA1194 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395806.1 1175960 D 314315 CDS YP_395807.1 81428807 3778606 1176700..1177407 1 NC_007576.1 hypothetical protein 1177407 3778606 LSA1195 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395807.1 1176700 D 314315 CDS YP_395808.1 81428808 3778607 complement(1177463..1178071) 1 NC_007576.1 lysophospholipase L 1178071 3778607 LSA1196 Lactobacillus sakei subsp. sakei 23K lysophospholipase L YP_395808.1 1177463 R 314315 CDS YP_395809.1 81428809 3778608 complement(1178068..1178868) 1 NC_007576.1 hypothetical protein 1178868 3778608 LSA1197 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395809.1 1178068 R 314315 CDS YP_395810.1 81428810 3778609 complement(1178877..1179353) 1 NC_007576.1 trehalose and glucose-specific phosphotransferase system, enzyme EIIA 1179353 3778609 LSA1198 Lactobacillus sakei subsp. sakei 23K trehalose and glucose-specific phosphotransferase system, enzyme EIIA YP_395810.1 1178877 R 314315 CDS YP_395811.1 81428811 3778610 complement(1179382..1181031) 1 NC_007576.1 trehalose-6-phosphate phosphoglucohydrolase 1181031 treC 3778610 treC Lactobacillus sakei subsp. sakei 23K trehalose-6-phosphate phosphoglucohydrolase YP_395811.1 1179382 R 314315 CDS YP_395812.1 81428812 3778611 complement(1181045..1182523) 1 NC_007576.1 trehalose and glucose-specific phosphotransferase system, enzyme IIBC 1182523 3778611 LSA1200 Lactobacillus sakei subsp. sakei 23K trehalose and glucose-specific phosphotransferase system, enzyme IIBC YP_395812.1 1181045 R 314315 CDS YP_395813.1 81428813 3778620 1182695..1183408 1 NC_007576.1 GntR family transcriptional regulator 1183408 3778620 LSA1201 Lactobacillus sakei subsp. sakei 23K GntR family transcriptional regulator YP_395813.1 1182695 D 314315 CDS YP_395814.1 81428814 3778621 complement(1183465..1183923) 1 NC_007576.1 hypothetical protein 1183923 3778621 LSA1202 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395814.1 1183465 R 314315 CDS YP_395815.1 81428815 3778622 complement(1184101..1186644) 1 NC_007576.1 hypothetical protein 1186644 3778622 LSA1203 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395815.1 1184101 R 314315 CDS YP_395816.1 81428816 3778623 complement(1186810..1187676) 1 NC_007576.1 sugar transporter 1187676 3778623 LSA1204 Lactobacillus sakei subsp. sakei 23K sugar transporter YP_395816.1 1186810 R 314315 CDS YP_395817.1 81428817 3778624 complement(1187965..1188573) 1 NC_007576.1 hypothetical protein 1188573 3778624 LSA1205 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395817.1 1187965 R 314315 CDS YP_395818.1 81428818 3778625 1188786..1189844 1 NC_007576.1 group 1 glycosyl transferase 1189844 3778625 LSA1206 Lactobacillus sakei subsp. sakei 23K group 1 glycosyl transferase YP_395818.1 1188786 D 314315 CDS YP_395819.1 81428819 3778626 1189948..1192125 1 NC_007576.1 phosphoglycerol transferase 1192125 3778626 LSA1207 Lactobacillus sakei subsp. sakei 23K phosphoglycerol transferase YP_395819.1 1189948 D 314315 CDS YP_395820.1 81428820 3778627 complement(1192175..1192636) 1 NC_007576.1 hypothetical protein 1192636 3778627 LSA1208 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395820.1 1192175 R 314315 CDS YP_395821.1 81428821 3778693 complement(1192630..1193382) 1 NC_007576.1 hypothetical protein 1193382 3778693 LSA1209 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395821.1 1192630 R 314315 CDS YP_395822.1 81428822 3778694 complement(1193498..1194088) 1 NC_007576.1 cytosine:cation symporter (C-terminal fragment), authentic frameshift 1194088 3778694 LSA1210 Lactobacillus sakei subsp. sakei 23K cytosine:cation symporter (C-terminal fragment), authentic frameshift YP_395822.1 1193498 R 314315 CDS YP_395823.1 81428823 3778695 complement(1194104..1194856) 1 NC_007576.1 cytosine:cation symporter (N-terminal fragment), authentic frameshit 1194856 3778695 LSA1211 Lactobacillus sakei subsp. sakei 23K cytosine:cation symporter (N-terminal fragment), authentic frameshit YP_395823.1 1194104 R 314315 CDS YP_395824.1 81428824 3778696 1195067..1195951 1 NC_007576.1 cytosine deaminase 1195951 3778696 LSA1212 Lactobacillus sakei subsp. sakei 23K cytosine deaminase YP_395824.1 1195067 D 314315 CDS YP_395825.1 81428825 3778697 1195963..1196301 1 NC_007576.1 cytosine deaminase 1196301 3778697 LSA1213 Lactobacillus sakei subsp. sakei 23K cytosine deaminase YP_395825.1 1195963 D 314315 CDS YP_395826.1 81428826 3778698 complement(1196352..1197788) 1 NC_007576.1 two-component system sensor histidine kinase 1197788 3778698 LSA1214 Lactobacillus sakei subsp. sakei 23K two-component system sensor histidine kinase YP_395826.1 1196352 R 314315 CDS YP_395827.1 81428827 3778699 complement(1197788..1198528) 1 NC_007576.1 two component system, response regulator 1198528 3778699 LSA1215 Lactobacillus sakei subsp. sakei 23K two component system, response regulator YP_395827.1 1197788 R 314315 CDS YP_395828.1 81428828 3778700 1198814..1199041 1 NC_007576.1 hypothetical protein 1199041 3778700 LSA1216 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395828.1 1198814 D 314315 CDS YP_395829.1 81428829 3778316 1199176..1199940 1 NC_007576.1 haloacid dehalogenase 1199940 3778316 LSA1218 Lactobacillus sakei subsp. sakei 23K haloacid dehalogenase YP_395829.1 1199176 D 314315 CDS YP_395830.1 81428830 3778317 1200077..1201468 1 NC_007576.1 cationic amino acid transport protein 1201468 3778317 LSA1219 Lactobacillus sakei subsp. sakei 23K cationic amino acid transport protein YP_395830.1 1200077 D 314315 CDS YP_395831.1 81428831 3778318 complement(1201510..1202385) 1 NC_007576.1 triphosphoribosyl-dephospho-coenzymeA synthase 1202385 citG 3778318 citG Lactobacillus sakei subsp. sakei 23K triphosphoribosyl-dephospho-coenzymeA synthase YP_395831.1 1201510 R 314315 CDS YP_395832.1 81428832 3778319 complement(1202378..1203073) 1 NC_007576.1 citrate catabolism transcriptional regulator 1203073 citR 3778319 citR Lactobacillus sakei subsp. sakei 23K citrate catabolism transcriptional regulator YP_395832.1 1202378 R 314315 CDS YP_395833.1 81428833 3778320 complement(1203155..1204555) 1 NC_007576.1 Converts oxaloacetate to phosphoenolpyruvate using ATP as an energy source; oxaloacetate decarboxylase 1204555 oadA 3778320 oadA Lactobacillus sakei subsp. sakei 23K oxaloacetate decarboxylase YP_395833.1 1203155 R 314315 CDS YP_395834.1 81428834 3778321 complement(1204549..1205100) 1 NC_007576.1 2'-(5''-phosphoribosyl)-3'-dephospho-CoA transferase; holo-citrate lyase synthase; CitG forms the prosthetic group precursor 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA which is then transferred to apo-ACP by CitX to produce holo-ACP and pyrophosphate; 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase 1205100 citX 3778321 citX Lactobacillus sakei subsp. sakei 23K 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase YP_395834.1 1204549 R 314315 CDS YP_395835.1 81428835 3778322 complement(1205093..1206625) 1 NC_007576.1 citrate lyase subunit alpha 1206625 citF 3778322 citF Lactobacillus sakei subsp. sakei 23K citrate lyase subunit alpha YP_395835.1 1205093 R 314315 CDS YP_395836.1 81428836 3778323 complement(1206625..1207482) 1 NC_007576.1 citrate lyase subunit beta 1207482 citE 3778323 citE Lactobacillus sakei subsp. sakei 23K citrate lyase subunit beta YP_395836.1 1206625 R 314315 CDS YP_395837.1 81428837 3778496 complement(1207491..1207796) 1 NC_007576.1 acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate; citrate lyase subunit gamma 1207796 citD 3778496 citD Lactobacillus sakei subsp. sakei 23K citrate lyase subunit gamma YP_395837.1 1207491 R 314315 CDS YP_395838.1 81428838 3778497 complement(1207802..1208791) 1 NC_007576.1 [citrate (pro-3S)-lyase] ligase 1208791 citC 3778497 citC Lactobacillus sakei subsp. sakei 23K [citrate (pro-3S)-lyase] ligase YP_395838.1 1207802 R 314315 CDS YP_395839.1 81428839 3778498 complement(1208794..1208916) 1 NC_007576.1 hypothetical protein 1208916 3778498 LSA1228 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395839.1 1208794 R 314315 CDS YP_395840.1 81428840 3778499 complement(1208930..1210051) 1 NC_007576.1 oxaloacetate decarboxylase subunit beta 1210051 oadB 3778499 oadB Lactobacillus sakei subsp. sakei 23K oxaloacetate decarboxylase subunit beta YP_395840.1 1208930 R 314315 CDS YP_395841.1 81428841 3778500 complement(1210063..1210452) 1 NC_007576.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 1210452 oadG 3778500 oadG Lactobacillus sakei subsp. sakei 23K acetyl-CoA carboxylase biotin carboxyl carrier protein subunit YP_395841.1 1210063 R 314315 CDS YP_395842.1 81428842 3778501 complement(1210452..1210769) 1 NC_007576.1 hypothetical protein 1210769 3778501 LSA1231 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395842.1 1210452 R 314315 CDS YP_395843.1 81428843 3778502 complement(1210800..1212149) 1 NC_007576.1 citrate:Mg(2+)(H+) symporter 1212149 citM 3778502 citM Lactobacillus sakei subsp. sakei 23K citrate:Mg(2+)(H+) symporter YP_395843.1 1210800 R 314315 CDS YP_395844.1 81428844 3778503 complement(1212343..1213110) 1 NC_007576.1 biotin-[acetyl-CoA-carboxylase] ligase 1213110 birA2 3778503 birA2 Lactobacillus sakei subsp. sakei 23K biotin-[acetyl-CoA-carboxylase] ligase YP_395844.1 1212343 R 314315 CDS YP_395845.1 81428845 3778464 complement(1213131..1213394) 1 NC_007576.1 hypothetical protein 1213394 3778464 LSA1234 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395845.1 1213131 R 314315 CDS YP_395846.1 81428846 3778465 complement(1213558..1214709) 1 NC_007576.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 1214709 dnaJ 3778465 dnaJ Lactobacillus sakei subsp. sakei 23K molecular chaperone DnaJ YP_395846.1 1213558 R 314315 CDS YP_395847.1 81428847 3778466 complement(1214829..1216670) 1 NC_007576.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 1216670 dnaK 3778466 dnaK Lactobacillus sakei subsp. sakei 23K molecular chaperone DnaK YP_395847.1 1214829 R 314315 CDS YP_395848.1 81428848 3778467 complement(1216707..1217309) 1 NC_007576.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 1217309 grpE 3778467 grpE Lactobacillus sakei subsp. sakei 23K heat shock protein GrpE YP_395848.1 1216707 R 314315 CDS YP_395849.1 81428849 3778468 complement(1217325..1218383) 1 NC_007576.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 1218383 hrcA 3778468 hrcA Lactobacillus sakei subsp. sakei 23K heat-inducible transcription repressor YP_395849.1 1217325 R 314315 CDS YP_395850.1 81428850 3778469 complement(1218564..1219211) 1 NC_007576.1 antibiotic isoleucine patch superfamily acetyltransferase 1219211 3778469 LSA1239 Lactobacillus sakei subsp. sakei 23K antibiotic isoleucine patch superfamily acetyltransferase YP_395850.1 1218564 R 314315 CDS YP_395851.1 81428851 3778470 complement(1219358..1220497) 1 NC_007576.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1220497 3778470 LSA1240 Lactobacillus sakei subsp. sakei 23K coproporphyrinogen III oxidase YP_395851.1 1219358 R 314315 CDS YP_395852.1 81428852 3778471 complement(1220497..1221450) 1 NC_007576.1 bifunctional riboflavin kinase/FMN adenylyltransferase 1221450 3778471 LSA1241 Lactobacillus sakei subsp. sakei 23K bifunctional riboflavin kinase/FMN adenylyltransferase YP_395852.1 1220497 R 314315 CDS YP_395853.1 81428853 3778447 complement(1221469..1222386) 1 NC_007576.1 tRNA-specific pseudouridylate synthase (tRNA pseudouridine synthase B) 1222386 truB 3778447 truB Lactobacillus sakei subsp. sakei 23K tRNA-specific pseudouridylate synthase (tRNA pseudouridine synthase B) YP_395853.1 1221469 R 314315 CDS YP_395854.1 81428854 3778448 complement(1222522..1223262) 1 NC_007576.1 hypothetical protein 1223262 3778448 LSA1243 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395854.1 1222522 R 314315 CDS YP_395855.1 81428855 3778449 complement(1223266..1223463) 1 NC_007576.1 hypothetical protein 1223463 3778449 LSA1244 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395855.1 1223266 R 314315 CDS YP_395856.1 81428856 3778450 complement(1223453..1223971) 1 NC_007576.1 hypothetical protein 1223971 3778450 LSA1245 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395856.1 1223453 R 314315 CDS YP_395857.1 81428857 3778451 complement(1223964..1225283) 1 NC_007576.1 glycosyl transferase family protein 1225283 3778451 LSA1246 Lactobacillus sakei subsp. sakei 23K glycosyl transferase family protein YP_395857.1 1223964 R 314315 CDS YP_395858.1 81428858 3778452 complement(1225531..1225887) 1 NC_007576.1 ribosome-binding factor A 1225887 rbfA 3778452 rbfA Lactobacillus sakei subsp. sakei 23K ribosome-binding factor A YP_395858.1 1225531 R 314315 CDS YP_395859.1 81428859 3778453 complement(1225910..1228723) 1 NC_007576.1 translation initiation factor IF-2 1228723 infB 3778453 infB Lactobacillus sakei subsp. sakei 23K translation initiation factor IF-2 YP_395859.1 1225910 R 314315 CDS YP_395860.1 81428860 3778454 complement(1228741..1229046) 1 NC_007576.1 50S ribosomal protein L7 1229046 3778454 LSA1249 Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L7 YP_395860.1 1228741 R 314315 CDS YP_395861.1 81428861 3778455 complement(1229043..1229345) 1 NC_007576.1 hypothetical protein 1229345 3778455 LSA1250 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395861.1 1229043 R 314315 CDS YP_395862.1 81428862 3778439 complement(1229357..1230574) 1 NC_007576.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1230574 nusA 3778439 nusA Lactobacillus sakei subsp. sakei 23K transcription elongation factor NusA YP_395862.1 1229357 R 314315 CDS YP_395863.1 81428863 3778440 complement(1230593..1230805) 1 NC_007576.1 hypothetical protein 1230805 3778440 LSA1252 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395863.1 1230593 R 314315 CDS YP_395864.1 81428864 3778441 complement(1230904..1231065) 1 NC_007576.1 hypothetical protein 1231065 3778441 LSA1253 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395864.1 1230904 R 314315 CDS YP_395865.1 81428865 3778442 complement(1231340..1231639) 1 NC_007576.1 hypothetical protein 1231639 3778442 LSA1254 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395865.1 1231340 R 314315 CDS YP_395866.1 81428866 3778443 complement(1231626..1233386) 1 NC_007576.1 hypothetical protein 1233386 3778443 LSA1255 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395866.1 1231626 R 314315 CDS YP_395867.1 81428867 3778444 complement(1233491..1237831) 1 NC_007576.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity; DNA polymerase III PolC 1237831 polC 3778444 polC Lactobacillus sakei subsp. sakei 23K DNA polymerase III PolC YP_395867.1 1233491 R 314315 CDS YP_395868.1 81428868 3778445 complement(1238006..1239715) 1 NC_007576.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1239715 proS 3778445 proS Lactobacillus sakei subsp. sakei 23K prolyl-tRNA synthetase YP_395868.1 1238006 R 314315 CDS YP_395869.1 81428869 3778446 complement(1239741..1241018) 1 NC_007576.1 membrane-associated zinc metalloendopeptidase 1241018 3778446 LSA1258 Lactobacillus sakei subsp. sakei 23K membrane-associated zinc metalloendopeptidase YP_395869.1 1239741 R 314315 CDS YP_395870.1 81428870 3778414 complement(1241225..1242013) 1 NC_007576.1 phosphatidate cytidylyltransferase 1242013 cdsA 3778414 cdsA Lactobacillus sakei subsp. sakei 23K phosphatidate cytidylyltransferase YP_395870.1 1241225 R 314315 CDS YP_395871.1 81428871 3778415 complement(1242044..1242799) 1 NC_007576.1 di-trans-poly-cis-decaprenylcistransferase 1242799 uppS 3778415 uppS Lactobacillus sakei subsp. sakei 23K di-trans-poly-cis-decaprenylcistransferase YP_395871.1 1242044 R 314315 CDS YP_395872.1 81428872 3778416 1242967..1245714 1 NC_007576.1 autotransport protein 1245714 3778416 LSA1261 Lactobacillus sakei subsp. sakei 23K autotransport protein YP_395872.1 1242967 D 314315 CDS YP_395873.1 81428873 3778417 complement(1245772..1246329) 1 NC_007576.1 ribosome recycling factor 1246329 frr 3778417 frr Lactobacillus sakei subsp. sakei 23K ribosome recycling factor YP_395873.1 1245772 R 314315 CDS YP_395874.1 81428874 3778418 complement(1246332..1247057) 1 NC_007576.1 uridylate kinase 1247057 pyrH 3778418 pyrH Lactobacillus sakei subsp. sakei 23K uridylate kinase YP_395874.1 1246332 R 314315 CDS YP_395875.1 81428875 3778419 complement(1247193..1248068) 1 NC_007576.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1248068 tsf 3778419 tsf Lactobacillus sakei subsp. sakei 23K elongation factor Ts YP_395875.1 1247193 R 314315 CDS YP_395876.1 81428876 3778420 complement(1248175..1248969) 1 NC_007576.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1248969 rpsB 3778420 rpsB Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S2 YP_395876.1 1248175 R 314315 CDS YP_395877.1 81428877 3778421 complement(1249137..1249412) 1 NC_007576.1 endonuclease 1249412 3778421 LSA1266 Lactobacillus sakei subsp. sakei 23K endonuclease YP_395877.1 1249137 R 314315 CDS YP_395878.1 81428878 3778398 complement(1249405..1250148) 1 NC_007576.1 methyltransferase 1250148 3778398 LSA1267 Lactobacillus sakei subsp. sakei 23K methyltransferase YP_395878.1 1249405 R 314315 CDS YP_395879.1 81428879 3778399 1250270..1250893 1 NC_007576.1 1-acyl-sn-glycerol-3-phosphate acyltransferase 1250893 plsC 3778399 plsC Lactobacillus sakei subsp. sakei 23K 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_395879.1 1250270 D 314315 CDS YP_395880.1 81428880 3778400 complement(1250954..1251889) 1 NC_007576.1 extracellular hydrolase (lipase/esterase) 1251889 3778400 LSA1269 Lactobacillus sakei subsp. sakei 23K extracellular hydrolase (lipase/esterase) YP_395880.1 1250954 R 314315 CDS YP_395882.1 81428882 3778402 complement(1252062..1253852) 1 NC_007576.1 multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunits 1253852 3778402 LSA1271 Lactobacillus sakei subsp. sakei 23K multidrug ABC exporter, ATP-binding and membrane-spanning/permease subunits YP_395882.1 1252062 R 314315 CDS YP_395883.1 81428883 3778403 complement(1253854..1255599) 1 NC_007576.1 multidrug ABC exporter, ATP-binding and membranespanning/permease subunits 1255599 3778403 LSA1272 Lactobacillus sakei subsp. sakei 23K multidrug ABC exporter, ATP-binding and membranespanning/permease subunits YP_395883.1 1253854 R 314315 CDS YP_395884.1 81428884 3778404 complement(1255741..1255971) 1 NC_007576.1 small extracellular protein 1255971 3778404 LSA1273 Lactobacillus sakei subsp. sakei 23K small extracellular protein YP_395884.1 1255741 R 314315 CDS YP_395885.1 81428885 3778405 complement(1256052..1256294) 1 NC_007576.1 hypothetical protein 1256294 3778405 LSA1274 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395885.1 1256052 R 314315 CDS YP_395886.1 81428886 3778390 1256429..1257043 1 NC_007576.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 1257043 lexA 3778390 lexA Lactobacillus sakei subsp. sakei 23K LexA repressor YP_395886.1 1256429 D 314315 CDS YP_395887.1 81428887 3778391 complement(1257177..1257695) 1 NC_007576.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1257695 apt 3778391 apt Lactobacillus sakei subsp. sakei 23K adenine phosphoribosyltransferase YP_395887.1 1257177 R 314315 CDS YP_395888.1 81428888 3778392 complement(1257719..1260031) 1 NC_007576.1 single-strand DNA-specific exonuclease RecJ 1260031 recJ 3778392 recJ Lactobacillus sakei subsp. sakei 23K single-strand DNA-specific exonuclease RecJ YP_395888.1 1257719 R 314315 CDS YP_395889.1 81428889 3778393 1260176..1261168 1 NC_007576.1 UDP-glucose 4-epimerase 1261168 galE2 3778393 galE2 Lactobacillus sakei subsp. sakei 23K UDP-glucose 4-epimerase YP_395889.1 1260176 D 314315 CDS YP_395890.1 81428890 3778394 1261254..1261619 1 NC_007576.1 hypothetical protein 1261619 3778394 LSA1281 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395890.1 1261254 D 314315 CDS YP_395891.1 81428891 3778395 1261636..1261962 1 NC_007576.1 hypothetical protein 1261962 3778395 LSA1282 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395891.1 1261636 D 314315 CDS YP_395892.1 81428892 3778396 complement(1262012..1263847) 1 NC_007576.1 cell surface protein 1263847 3778396 LSA1283 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_395892.1 1262012 R 314315 CDS YP_395893.1 81428893 3778397 complement(1263837..1264232) 1 NC_007576.1 hypothetical protein 1264232 3778397 LSA1284 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395893.1 1263837 R 314315 CDS YP_395894.1 81428894 3778382 complement(1264222..1264803) 1 NC_007576.1 hypothetical protein 1264803 3778382 LSA1285 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395894.1 1264222 R 314315 CDS YP_395895.1 81428895 3778383 1264928..1265179 1 NC_007576.1 IS3 family transposase 1265179 tnpA5-IS1520 3778383 tnpA5-IS1520 Lactobacillus sakei subsp. sakei 23K IS3 family transposase YP_395895.1 1264928 D 314315 CDS YP_395896.1 81428896 3778384 1265200..1265997 1 NC_007576.1 IS3 family transposase 1265997 tnpB5-IS1520 3778384 tnpB5-IS1520 Lactobacillus sakei subsp. sakei 23K IS3 family transposase YP_395896.1 1265200 D 314315 CDS YP_395897.1 81428897 3778385 complement(1266094..1266570) 1 NC_007576.1 hypothetical protein 1266570 3778385 LSA1286_c Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395897.1 1266094 R 314315 CDS YP_395898.1 81428898 3778386 complement(1266691..1267302) 1 NC_007576.1 cell surface protein 1267302 3778386 LSA1287 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_395898.1 1266691 R 314315 CDS YP_395899.1 81428899 3778387 complement(1267449..1267958) 1 NC_007576.1 hypothetical protein 1267958 3778387 LSA1288 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395899.1 1267449 R 314315 CDS YP_395900.1 81428900 3778388 1268105..1268299 1 NC_007576.1 hypothetical protein 1268299 3778388 LSA1289 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395900.1 1268105 D 314315 CDS YP_395901.1 81428901 3778389 complement(1268339..1270177) 1 NC_007576.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1270177 lepA 3778389 lepA Lactobacillus sakei subsp. sakei 23K GTP-binding protein LepA YP_395901.1 1268339 R 314315 CDS YP_395902.1 81428902 3778366 complement(1270312..1270455) 1 NC_007576.1 hypothetical protein 1270455 3778366 LSA1291 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395902.1 1270312 R 314315 CDS YP_395903.1 81428903 3778367 1270599..1270910 1 NC_007576.1 prophage protein 1270910 3778367 LSA1292 Lactobacillus sakei subsp. sakei 23K prophage protein YP_395903.1 1270599 D 314315 CDS YP_395904.1 81428904 3778368 1271015..1271566 1 NC_007576.1 hypothetical protein 1271566 3778368 LSA1293 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395904.1 1271015 D 314315 CDS YP_395905.1 81428905 3778369 1271568..1272404 1 NC_007576.1 prophage nuclease 1272404 3778369 LSA1294 Lactobacillus sakei subsp. sakei 23K prophage nuclease YP_395905.1 1271568 D 314315 CDS YP_395906.1 81428906 3778370 1272540..1273346 1 NC_007576.1 hypothetical protein 1273346 3778370 LSA1295 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395906.1 1272540 D 314315 CDS YP_395907.1 81428907 3778371 1273470..1273835 1 NC_007576.1 hypothetical protein 1273835 3778371 LSA1296 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395907.1 1273470 D 314315 CDS YP_395908.1 81428908 3778372 complement(1274378..1274836) 1 NC_007576.1 hypothetical protein 1274836 3778372 LSA1297 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395908.1 1274378 R 314315 CDS YP_395909.1 81428909 3778373 complement(1274891..1276087) 1 NC_007576.1 acetate kinase 1276087 ack2 3778373 ack2 Lactobacillus sakei subsp. sakei 23K acetate kinase YP_395909.1 1274891 R 314315 CDS YP_395910.1 81428910 3778357 complement(1276109..1277119) 1 NC_007576.1 adenine-specific DNA methyltransferase 1277119 3778357 LSA1299 Lactobacillus sakei subsp. sakei 23K adenine-specific DNA methyltransferase YP_395910.1 1276109 R 314315 CDS YP_395911.1 81428911 3778358 complement(1277243..1277581) 1 NC_007576.1 hypothetical protein 1277581 3778358 LSA1300 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395911.1 1277243 R 314315 CDS YP_395912.1 81428912 3778359 complement(1277544..1278005) 1 NC_007576.1 hypothetical protein 1278005 3778359 LSA1301 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395912.1 1277544 R 314315 CDS YP_395913.1 81428913 3778360 complement(1278031..1278336) 1 NC_007576.1 hypothetical protein 1278336 3778360 LSA1302 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395913.1 1278031 R 314315 CDS YP_395914.1 81428914 3778361 complement(1278323..1278727) 1 NC_007576.1 hypothetical protein 1278727 3778361 LSA1303 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395914.1 1278323 R 314315 CDS YP_395915.1 81428915 3778362 complement(1278747..1279046) 1 NC_007576.1 type II secretion/competence system protein ComGC-like protein 1279046 3778362 LSA1304 Lactobacillus sakei subsp. sakei 23K type II secretion/competence system protein ComGC-like protein YP_395915.1 1278747 R 314315 CDS YP_395916.1 81428916 3778363 complement(1279043..1280050) 1 NC_007576.1 type II secretion/competence system protein comGB-like protein 1280050 3778363 LSA1305 Lactobacillus sakei subsp. sakei 23K type II secretion/competence system protein comGB-like protein YP_395916.1 1279043 R 314315 CDS YP_395917.1 81428917 3778364 complement(1280043..1280933) 1 NC_007576.1 type II secretion/competence system protein ComGA-like protein 1280933 3778364 LSA1306 Lactobacillus sakei subsp. sakei 23K type II secretion/competence system protein ComGA-like protein YP_395917.1 1280043 R 314315 CDS YP_395918.1 81428918 3778365 complement(1281049..1281780) 1 NC_007576.1 hypothetical protein 1281780 3778365 LSA1307 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395918.1 1281049 R 314315 CDS YP_395919.1 81428919 3778283 complement(1281871..1282371) 1 NC_007576.1 hypothetical protein 1282371 3778283 LSA1308 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395919.1 1281871 R 314315 CDS YP_395920.1 81428920 3778284 1282468..1282842 1 NC_007576.1 hypothetical protein 1282842 3778284 LSA1309 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395920.1 1282468 D 314315 CDS YP_395921.1 81428921 3778285 complement(1283072..1284163) 1 NC_007576.1 hypothetical protein 1284163 3778285 LSA1310 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395921.1 1283072 R 314315 CDS YP_395922.1 81428922 3778286 1284403..1284642 1 NC_007576.1 hypothetical protein 1284642 3778286 LSA1311 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395922.1 1284403 D 314315 CDS YP_395923.1 81428923 3778287 complement(1284708..1285721) 1 NC_007576.1 hypothetical protein 1285721 3778287 LSA1312 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395923.1 1284708 R 314315 CDS YP_395924.1 81428924 3778288 1285831..1286658 1 NC_007576.1 LysR family transcriptional regulator 1286658 3778288 LSA1313 Lactobacillus sakei subsp. sakei 23K LysR family transcriptional regulator YP_395924.1 1285831 D 314315 CDS YP_395925.1 81428925 3778289 1286671..1287987 1 NC_007576.1 drug:Na(+) antiporter (drug efflux pump) 1287987 3778289 LSA1314 Lactobacillus sakei subsp. sakei 23K drug:Na(+) antiporter (drug efflux pump) YP_395925.1 1286671 D 314315 CDS YP_395926.1 81428926 3778290 complement(1288041..1288862) 1 NC_007576.1 lipase/esterase 1288862 3778290 LSA1315 Lactobacillus sakei subsp. sakei 23K lipase/esterase YP_395926.1 1288041 R 314315 CDS YP_395927.1 81428927 3778259 complement(1288899..1289801) 1 NC_007576.1 pseudouridylate synthase 1289801 rluA3 3778259 rluA3 Lactobacillus sakei subsp. sakei 23K pseudouridylate synthase YP_395927.1 1288899 R 314315 CDS YP_395928.1 81428928 3778260 1289947..1290504 1 NC_007576.1 chromate reductase 1290504 3778260 LSA1317 Lactobacillus sakei subsp. sakei 23K chromate reductase YP_395928.1 1289947 D 314315 CDS YP_395929.1 81428929 3778261 1290697..1290999 1 NC_007576.1 hypothetical protein 1290999 3778261 LSA1318 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395929.1 1290697 D 314315 CDS YP_395930.1 81428930 3778262 complement(1291062..1291238) 1 NC_007576.1 hypothetical protein 1291238 3778262 LSA1319 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395930.1 1291062 R 314315 CDS YP_395931.1 81428931 3778263 complement(1291238..1291936) 1 NC_007576.1 NADPH-quinone oxidoreductase 1291936 3778263 LSA1320 Lactobacillus sakei subsp. sakei 23K NADPH-quinone oxidoreductase YP_395931.1 1291238 R 314315 CDS YP_395932.1 81428932 3778264 complement(1291996..1293339) 1 NC_007576.1 glutamate--ammonia ligase 1293339 glnA 3778264 glnA Lactobacillus sakei subsp. sakei 23K glutamate--ammonia ligase YP_395932.1 1291996 R 314315 CDS YP_395933.1 81428933 3778265 complement(1293355..1293726) 1 NC_007576.1 glutamine synthetase 1293726 glnR 3778265 glnR Lactobacillus sakei subsp. sakei 23K glutamine synthetase YP_395933.1 1293355 R 314315 CDS YP_395934.1 81428934 3778266 complement(1293849..1294394) 1 NC_007576.1 3-methyladenine DNA glycosylase 1294394 tag2 3778266 tag2 Lactobacillus sakei subsp. sakei 23K 3-methyladenine DNA glycosylase YP_395934.1 1293849 R 314315 CDS YP_395935.1 81428935 3778235 complement(1294388..1295251) 1 NC_007576.1 XRE family transcriptional regulator 1295251 3778235 LSA1324 Lactobacillus sakei subsp. sakei 23K XRE family transcriptional regulator YP_395935.1 1294388 R 314315 CDS YP_395936.1 81428936 3778236 complement(1295420..1296676) 1 NC_007576.1 hypothetical protein 1296676 3778236 LSA1325 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395936.1 1295420 R 314315 CDS YP_395937.1 81428937 3778237 complement(1296696..1297628) 1 NC_007576.1 tRNA isopentenyltransferase 1297628 miaA 3778237 miaA Lactobacillus sakei subsp. sakei 23K tRNA isopentenyltransferase YP_395937.1 1296696 R 314315 CDS YP_395938.1 81428938 3778238 1297727..1297906 1 NC_007576.1 extracellular peptide 1297906 3778238 LSA1327 Lactobacillus sakei subsp. sakei 23K extracellular peptide YP_395938.1 1297727 D 314315 CDS YP_395939.1 81428939 3778239 complement(1298281..1298694) 1 NC_007576.1 rhodanese-sulfurtransferase 1298694 3778239 LSA1328 Lactobacillus sakei subsp. sakei 23K rhodanese-sulfurtransferase YP_395939.1 1298281 R 314315 CDS YP_395940.1 81428940 3778240 complement(1298719..1299690) 1 NC_007576.1 glucokinase 1299690 glk 3778240 glk Lactobacillus sakei subsp. sakei 23K glucokinase YP_395940.1 1298719 R 314315 CDS YP_395941.1 81428941 3778241 complement(1299687..1299920) 1 NC_007576.1 hypothetical protein 1299920 3778241 LSA1330 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395941.1 1299687 R 314315 CDS YP_395942.1 81428942 3778242 complement(1299953..1300618) 1 NC_007576.1 hypothetical protein 1300618 3778242 LSA1331 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395942.1 1299953 R 314315 CDS YP_395943.1 81428943 3778227 complement(1300631..1301173) 1 NC_007576.1 5-formyltetrahydrofolate cyclo-ligase 1301173 fthC 3778227 fthC Lactobacillus sakei subsp. sakei 23K 5-formyltetrahydrofolate cyclo-ligase YP_395943.1 1300631 R 314315 CDS YP_395944.1 81428944 3778228 complement(1301232..1301381) 1 NC_007576.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1301381 rpmG 3778228 rpmG Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L33 YP_395944.1 1301232 R 314315 CDS YP_395945.1 81428945 3778229 complement(1301490..1303604) 1 NC_007576.1 bifuntional dimerisation/transpeptidase penicillin-binding protein 2B 1303604 pbp2B2 3778229 pbp2B2 Lactobacillus sakei subsp. sakei 23K bifuntional dimerisation/transpeptidase penicillin-binding protein 2B YP_395945.1 1301490 R 314315 CDS YP_395946.1 81428946 3778230 1303874..1306489 1 NC_007576.1 hypothetical protein 1306489 3778230 LSA1335 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395946.1 1303874 D 314315 CDS YP_395947.1 81428947 3778231 complement(1306655..1308769) 1 NC_007576.1 Na(+)/H(+) antiporter 1308769 3778231 LSA1336 Lactobacillus sakei subsp. sakei 23K Na(+)/H(+) antiporter YP_395947.1 1306655 R 314315 CDS YP_395948.1 81428948 3778232 complement(1308829..1309740) 1 NC_007576.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1309740 murB 3778232 murB Lactobacillus sakei subsp. sakei 23K UDP-N-acetylenolpyruvoylglucosamine reductase YP_395948.1 1308829 R 314315 CDS YP_395949.1 81428949 3778233 1309869..1310633 1 NC_007576.1 exodeoxyribonuclease III 1310633 exoA 3778233 exoA Lactobacillus sakei subsp. sakei 23K exodeoxyribonuclease III YP_395949.1 1309869 D 314315 CDS YP_395950.1 81428950 3778234 1310669..1311205 1 NC_007576.1 DNA-directed DNA polymerase III subunit epsilon 1311205 dnaQ 3778234 dnaQ Lactobacillus sakei subsp. sakei 23K DNA-directed DNA polymerase III subunit epsilon YP_395950.1 1310669 D 314315 CDS YP_395951.1 81428951 3778219 complement(1311540..1312448) 1 NC_007576.1 transporter 1312448 3778219 LSA1340 Lactobacillus sakei subsp. sakei 23K transporter YP_395951.1 1311540 R 314315 CDS YP_395952.1 81428952 3778220 complement(1312460..1312987) 1 NC_007576.1 GNAT family acetyltransferase 1312987 3778220 LSA1341 Lactobacillus sakei subsp. sakei 23K GNAT family acetyltransferase YP_395952.1 1312460 R 314315 CDS YP_395953.1 81428953 3778221 complement(1312977..1313441) 1 NC_007576.1 hypothetical protein 1313441 3778221 LSA1342 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395953.1 1312977 R 314315 CDS YP_395954.1 81428954 3778222 complement(1313600..1314586) 1 NC_007576.1 in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase 1314586 eutD 3778222 eutD Lactobacillus sakei subsp. sakei 23K phosphotransacetylase YP_395954.1 1313600 R 314315 CDS YP_395955.1 81428955 3778223 complement(1314677..1315366) 1 NC_007576.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 1315366 ung 3778223 ung Lactobacillus sakei subsp. sakei 23K uracil-DNA glycosylase YP_395955.1 1314677 R 314315 CDS YP_395956.1 81428956 3778224 1315482..1316369 1 NC_007576.1 haloacid dehalogenase 1316369 3778224 LSA1345 Lactobacillus sakei subsp. sakei 23K haloacid dehalogenase YP_395956.1 1315482 D 314315 CDS YP_395957.1 81428957 3778225 1316376..1316894 1 NC_007576.1 hypothetical protein 1316894 3778225 LSA1346 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395957.1 1316376 D 314315 CDS YP_395958.1 81428958 3778226 1317023..1317754 1 NC_007576.1 hypothetical protein 1317754 3778226 LSA1347 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395958.1 1317023 D 314315 CDS YP_395959.1 81428959 3778187 complement(1318158..1318631) 1 NC_007576.1 hypothetical protein 1318631 3778187 LSA1348 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395959.1 1318158 R 314315 CDS YP_395960.1 81428960 3778188 complement(1318784..1319347) 1 NC_007576.1 GNAT family acetyltransferase 1319347 3778188 LSA1349 Lactobacillus sakei subsp. sakei 23K GNAT family acetyltransferase YP_395960.1 1318784 R 314315 CDS YP_395961.1 81428961 3778189 complement(1319410..1320081) 1 NC_007576.1 hypothetical protein 1320081 3778189 LSA1350 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395961.1 1319410 R 314315 CDS YP_395962.1 81428962 3778190 complement(1320085..1321512) 1 NC_007576.1 transcriptional regulator 1321512 3778190 LSA1351 Lactobacillus sakei subsp. sakei 23K transcriptional regulator YP_395962.1 1320085 R 314315 CDS YP_395963.1 81428963 3778191 1321625..1322419 1 NC_007576.1 phosphomethylpyrimidine kinase 1322419 3778191 LSA1352 Lactobacillus sakei subsp. sakei 23K phosphomethylpyrimidine kinase YP_395963.1 1321625 D 314315 CDS YP_395964.1 81428964 3778192 1322409..1322909 1 NC_007576.1 hypothetical protein 1322909 3778192 LSA1353 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395964.1 1322409 D 314315 CDS YP_395965.1 81428965 3778193 1322921..1323472 1 NC_007576.1 hypothetical protein 1323472 3778193 LSA1354 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395965.1 1322921 D 314315 CDS YP_395966.1 81428966 3778194 complement(1323949..1325763) 1 NC_007576.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1325763 glmS 3778194 glmS Lactobacillus sakei subsp. sakei 23K glucosamine--fructose-6-phosphate aminotransferase YP_395966.1 1323949 R 314315 CDS YP_395967.1 81428967 3778170 1325960..1326295 1 NC_007576.1 hypothetical protein 1326295 3778170 LSA1356 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395967.1 1325960 D 314315 CDS YP_395968.1 81428968 3778171 complement(1326628..1327980) 1 NC_007576.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1327980 glmM 3778171 glmM Lactobacillus sakei subsp. sakei 23K phosphoglucosamine mutase YP_395968.1 1326628 R 314315 CDS YP_395969.1 81428969 3778172 complement(1328015..1329136) 1 NC_007576.1 hypothetical protein 1329136 3778172 LSA1358 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395969.1 1328015 R 314315 CDS YP_395970.1 81428970 3778173 complement(1329163..1330014) 1 NC_007576.1 hypothetical protein 1330014 3778173 LSA1359 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395970.1 1329163 R 314315 CDS YP_395971.1 81428971 3778174 complement(1330075..1331142) 1 NC_007576.1 spermidine/putrescine ABC transporter substrate-binding protein 1331142 potD 3778174 potD Lactobacillus sakei subsp. sakei 23K spermidine/putrescine ABC transporter substrate-binding protein YP_395971.1 1330075 R 314315 CDS YP_395972.1 81428972 3778175 complement(1331139..1331963) 1 NC_007576.1 spermidine/putrescine ABC transporter transmembrane protein 1331963 potC 3778175 potC Lactobacillus sakei subsp. sakei 23K spermidine/putrescine ABC transporter transmembrane protein YP_395972.1 1331139 R 314315 CDS YP_395973.1 81428973 3778176 complement(1331960..1332775) 1 NC_007576.1 spermidine/putrescine ABC transporter transmembrane protein 1332775 potB 3778176 potB Lactobacillus sakei subsp. sakei 23K spermidine/putrescine ABC transporter transmembrane protein YP_395973.1 1331960 R 314315 CDS YP_395974.1 81428974 3778177 complement(1332784..1333875) 1 NC_007576.1 spermidine/putrescine ABC transporter ATP-binding protein 1333875 potA 3778177 potA Lactobacillus sakei subsp. sakei 23K spermidine/putrescine ABC transporter ATP-binding protein YP_395974.1 1332784 R 314315 CDS YP_395975.1 81428975 3778178 1334031..1335026 1 NC_007576.1 zinc-containing alcohol dehydrogenase (oxidoreductase) 1335026 3778178 LSA1364 Lactobacillus sakei subsp. sakei 23K zinc-containing alcohol dehydrogenase (oxidoreductase) YP_395975.1 1334031 D 314315 CDS YP_395976.1 81428976 3778162 complement(1335081..1335299) 1 NC_007576.1 hypothetical protein 1335299 3778162 LSA1365 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395976.1 1335081 R 314315 CDS YP_395977.1 81428977 3778163 complement(1335374..1336039) 1 NC_007576.1 ABC transporter ATP-binding protein 1336039 3778163 LSA1366 Lactobacillus sakei subsp. sakei 23K ABC transporter ATP-binding protein YP_395977.1 1335374 R 314315 CDS YP_395978.1 81428978 3778164 complement(1336041..1337099) 1 NC_007576.1 ABC transporter permease/transmembrane protein 1337099 3778164 LSA1367 Lactobacillus sakei subsp. sakei 23K ABC transporter permease/transmembrane protein YP_395978.1 1336041 R 314315 CDS YP_395979.1 81428979 3778165 complement(1337233..1337526) 1 NC_007576.1 hypothetical protein 1337526 3778165 LSA1368 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395979.1 1337233 R 314315 CDS YP_395980.1 81428980 3778166 complement(1337552..1338151) 1 NC_007576.1 two-component system response regulator 1338151 3778166 LSA1369 Lactobacillus sakei subsp. sakei 23K two-component system response regulator YP_395980.1 1337552 R 314315 CDS YP_395981.1 81428981 3778167 complement(1338186..1339250) 1 NC_007576.1 two-component system sensor histidine kinase 1339250 3778167 LSA1370 Lactobacillus sakei subsp. sakei 23K two-component system sensor histidine kinase YP_395981.1 1338186 R 314315 CDS YP_395982.1 81428982 3778168 complement(1339247..1340005) 1 NC_007576.1 hypothetical protein 1340005 3778168 LSA1371 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395982.1 1339247 R 314315 CDS YP_395983.1 81428983 3778169 complement(1341026..1341499) 1 NC_007576.1 transcription elongation factor GreA 1341499 greA 3778169 greA Lactobacillus sakei subsp. sakei 23K transcription elongation factor GreA YP_395983.1 1341026 R 314315 CDS YP_395984.1 81428984 3778122 complement(1341521..1342156) 1 NC_007576.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 1342156 udk 3778122 udk Lactobacillus sakei subsp. sakei 23K uridine kinase YP_395984.1 1341521 R 314315 CDS YP_395985.1 81428985 3778123 complement(1342235..1343386) 1 NC_007576.1 hypothetical protein 1343386 3778123 LSA1374 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395985.1 1342235 R 314315 CDS YP_395986.1 81428986 3778124 complement(1343472..1345892) 1 NC_007576.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1345892 pheT 3778124 pheT Lactobacillus sakei subsp. sakei 23K phenylalanyl-tRNA synthetase subunit beta YP_395986.1 1343472 R 314315 CDS YP_395987.1 81428987 3778125 complement(1345896..1346942) 1 NC_007576.1 phenylalanyl-tRNA synthetase subunit alpha 1346942 pheS 3778125 pheS Lactobacillus sakei subsp. sakei 23K phenylalanyl-tRNA synthetase subunit alpha YP_395987.1 1345896 R 314315 CDS YP_395988.1 81428988 3778126 complement(1347218..1347574) 1 NC_007576.1 hypothetical protein 1347574 3778126 LSA1378 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395988.1 1347218 R 314315 CDS YP_395989.1 81428989 3778127 complement(1347653..1348165) 1 NC_007576.1 metal-dependent phosphohydrolase 1348165 3778127 LSA1379 Lactobacillus sakei subsp. sakei 23K metal-dependent phosphohydrolase YP_395989.1 1347653 R 314315 CDS YP_395990.1 81428990 3778128 complement(1348279..1349040) 1 NC_007576.1 tRNA/rRNA methyltransferase 1349040 3778128 LSA1380 Lactobacillus sakei subsp. sakei 23K tRNA/rRNA methyltransferase YP_395990.1 1348279 R 314315 CDS YP_395991.1 81428991 3778129 1349170..1349448 1 NC_007576.1 acylphosphatase 1349448 3778129 LSA1381 Lactobacillus sakei subsp. sakei 23K acylphosphatase YP_395991.1 1349170 D 314315 CDS YP_395992.1 81428992 3778114 1349511..1350500 1 NC_007576.1 membrane protein chaperone oxaA 1350500 oxaA1 3778114 oxaA1 Lactobacillus sakei subsp. sakei 23K membrane protein chaperone oxaA YP_395992.1 1349511 D 314315 CDS YP_395993.1 81428993 3778115 complement(1350697..1352202) 1 NC_007576.1 two-component system sensor histidine kinase 1352202 3778115 LSA1383 Lactobacillus sakei subsp. sakei 23K two-component system sensor histidine kinase YP_395993.1 1350697 R 314315 CDS YP_395994.1 81428994 3778116 complement(1352199..1352885) 1 NC_007576.1 two-component system response regulator 1352885 3778116 LSA1384 Lactobacillus sakei subsp. sakei 23K two-component system response regulator YP_395994.1 1352199 R 314315 CDS YP_395995.1 81428995 3778117 complement(1353144..1354565) 1 NC_007576.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1354565 gndA 3778117 gndA Lactobacillus sakei subsp. sakei 23K 6-phosphogluconate dehydrogenase YP_395995.1 1353144 R 314315 CDS YP_395996.1 81428996 3778118 complement(1354731..1355291) 1 NC_007576.1 hypothetical protein 1355291 3778118 LSA1386 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395996.1 1354731 R 314315 CDS YP_395997.1 81428997 3778119 complement(1355285..1356460) 1 NC_007576.1 hypothetical protein 1356460 3778119 LSA1387 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395997.1 1355285 R 314315 CDS YP_395998.1 81428998 3778120 complement(1356469..1357200) 1 NC_007576.1 methyltransferase 1357200 3778120 LSA1388 Lactobacillus sakei subsp. sakei 23K methyltransferase YP_395998.1 1356469 R 314315 CDS YP_395999.1 81428999 3778121 complement(1357197..1357556) 1 NC_007576.1 hypothetical protein 1357556 3778121 LSA1389 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_395999.1 1357197 R 314315 CDS YP_396000.1 81429000 3778090 complement(1357569..1358171) 1 NC_007576.1 metal-dependent phosphohydrolase 1358171 3778090 LSA1390 Lactobacillus sakei subsp. sakei 23K metal-dependent phosphohydrolase YP_396000.1 1357569 R 314315 CDS YP_396001.1 81429001 3778091 complement(1358164..1358811) 1 NC_007576.1 nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+) pyrophosphorylase) 1358811 nadD 3778091 nadD Lactobacillus sakei subsp. sakei 23K nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+) pyrophosphorylase) YP_396001.1 1358164 R 314315 CDS YP_396002.1 81429002 3778092 complement(1358827..1359144) 1 NC_007576.1 hypothetical protein 1359144 3778092 LSA1392 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396002.1 1358827 R 314315 CDS YP_396003.1 81429003 3778093 complement(1359167..1360303) 1 NC_007576.1 in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; GTP-binding protein YqeH 1360303 3778093 LSA1393 Lactobacillus sakei subsp. sakei 23K GTP-binding protein YqeH YP_396003.1 1359167 R 314315 CDS YP_396004.1 81429004 3778094 complement(1360296..1360826) 1 NC_007576.1 haloacid dehalogenase 1360826 3778094 LSA1394 Lactobacillus sakei subsp. sakei 23K haloacid dehalogenase YP_396004.1 1360296 R 314315 CDS YP_396005.1 81429005 3778095 1361023..1361958 1 NC_007576.1 zinc-containing alcohol dehydrogenase (oxidoreductase) 1361958 3778095 LSA1395 Lactobacillus sakei subsp. sakei 23K zinc-containing alcohol dehydrogenase (oxidoreductase) YP_396005.1 1361023 D 314315 CDS YP_396006.1 81429006 3778096 complement(1362034..1362393) 1 NC_007576.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1362393 rplT 3778096 rplT Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L20 YP_396006.1 1362034 R 314315 CDS YP_396007.1 81429007 3778097 complement(1362478..1362678) 1 NC_007576.1 50S ribosomal protein L35 1362678 rpmI 3778097 rpmI Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L35 YP_396007.1 1362478 R 314315 CDS YP_396008.1 81429008 3778074 complement(1362712..1363215) 1 NC_007576.1 translation initiation factor IF-3 1363215 infC 3778074 infC Lactobacillus sakei subsp. sakei 23K translation initiation factor IF-3 YP_396008.1 1362712 R 314315 CDS YP_396009.1 81429009 3778075 complement(1363470..1364576) 1 NC_007576.1 L-lactate oxidase 1364576 loxL2 3778075 loxL2 Lactobacillus sakei subsp. sakei 23K L-lactate oxidase YP_396009.1 1363470 R 314315 CDS YP_396010.1 81429010 3778076 complement(1364872..1366842) 1 NC_007576.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 1366842 thrS 3778076 thrS Lactobacillus sakei subsp. sakei 23K threonyl-tRNA synthetase YP_396010.1 1364872 R 314315 CDS YP_396011.1 81429011 3778077 complement(1367154..1368080) 1 NC_007576.1 Primosomal protein that may act to load helicase DnaC during DNA replication; primosomal protein DnaI 1368080 dnaI 3778077 dnaI Lactobacillus sakei subsp. sakei 23K primosomal protein DnaI YP_396011.1 1367154 R 314315 CDS YP_396012.1 81429012 3778078 complement(1368080..1369459) 1 NC_007576.1 chromosome replication initiation/membrane attachment protein B 1369459 dnaB 3778078 dnaB Lactobacillus sakei subsp. sakei 23K chromosome replication initiation/membrane attachment protein B YP_396012.1 1368080 R 314315 CDS YP_396013.1 81429013 3778079 complement(1369477..1369950) 1 NC_007576.1 transcriptional regulator NrdR 1369950 nrdR 3778079 nrdR Lactobacillus sakei subsp. sakei 23K transcriptional regulator NrdR YP_396013.1 1369477 R 314315 CDS YP_396014.1 81429014 3778080 complement(1370499..1371107) 1 NC_007576.1 dephosphocoenzyme A kinase 1371107 coaE 3778080 coaE Lactobacillus sakei subsp. sakei 23K dephosphocoenzyme A kinase YP_396014.1 1370499 R 314315 CDS YP_396015.1 81429015 3778081 complement(1371107..1371943) 1 NC_007576.1 formamidopyrimidine-DNA glycosylase 1371943 fpg 3778081 fpg Lactobacillus sakei subsp. sakei 23K formamidopyrimidine-DNA glycosylase YP_396015.1 1371107 R 314315 CDS YP_396016.1 81429016 3778057 complement(1371955..1374615) 1 NC_007576.1 DNA-directed DNA polymerase I 1374615 polA 3778057 polA Lactobacillus sakei subsp. sakei 23K DNA-directed DNA polymerase I YP_396016.1 1371955 R 314315 CDS YP_396017.1 81429017 3778058 complement(1374739..1375230) 1 NC_007576.1 MarR family transcriptional regulator 1375230 3778058 LSA1407 Lactobacillus sakei subsp. sakei 23K MarR family transcriptional regulator YP_396017.1 1374739 R 314315 CDS YP_396018.1 81429018 3778059 complement(1375706..1376491) 1 NC_007576.1 hypothetical protein 1376491 3778059 LSA1408 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396018.1 1375706 R 314315 CDS YP_396019.1 81429019 3778060 complement(1376796..1377857) 1 NC_007576.1 cell surface protein 1377857 3778060 LSA1409 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_396019.1 1376796 R 314315 CDS YP_396020.1 81429020 3778061 complement(1378262..1378732) 1 NC_007576.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1378732 smpB 3778061 smpB Lactobacillus sakei subsp. sakei 23K SsrA-binding protein YP_396020.1 1378262 R 314315 CDS YP_396021.1 81429021 3778062 complement(1378741..1381095) 1 NC_007576.1 exoribonuclease R 1381095 rnr 3778062 rnr Lactobacillus sakei subsp. sakei 23K exoribonuclease R YP_396021.1 1378741 R 314315 CDS YP_396022.1 81429022 3778063 complement(1381111..1381869) 1 NC_007576.1 lipase/esterase 1381869 3778063 LSA1412 Lactobacillus sakei subsp. sakei 23K lipase/esterase YP_396022.1 1381111 R 314315 CDS YP_396023.1 81429023 3778064 complement(1381982..1382218) 1 NC_007576.1 preprotein translocase subunit SecG 1382218 secG 3778064 secG Lactobacillus sakei subsp. sakei 23K preprotein translocase subunit SecG YP_396023.1 1381982 R 314315 CDS YP_396024.1 81429024 3777321 complement(1382298..1383872) 1 NC_007576.1 chloride channel protein 1383872 3777321 LSA1414 Lactobacillus sakei subsp. sakei 23K chloride channel protein YP_396024.1 1382298 R 314315 CDS YP_396025.1 81429025 3777322 1384031..1385464 1 NC_007576.1 amino acid/polyamine transport protein 1385464 3777322 LSA1415 Lactobacillus sakei subsp. sakei 23K amino acid/polyamine transport protein YP_396025.1 1384031 D 314315 CDS YP_396026.1 81429026 3777323 complement(1385640..1386797) 1 NC_007576.1 ABC transporter permease/transmembrane protein 1386797 3777323 LSA1416 Lactobacillus sakei subsp. sakei 23K ABC transporter permease/transmembrane protein YP_396026.1 1385640 R 314315 CDS YP_396027.1 81429027 3777324 complement(1386815..1387381) 1 NC_007576.1 ABC transporter ATP-binding protein 1387381 3777324 LSA1417 Lactobacillus sakei subsp. sakei 23K ABC transporter ATP-binding protein YP_396027.1 1386815 R 314315 CDS YP_396028.1 81429028 3777325 complement(1387392..1387706) 1 NC_007576.1 ABC transporter ATP-binding protein 1387706 3777325 LSA1418 Lactobacillus sakei subsp. sakei 23K ABC transporter ATP-binding protein YP_396028.1 1387392 R 314315 CDS YP_396029.1 81429029 3777326 complement(1387693..1388079) 1 NC_007576.1 GntR family transcriptional regulator 1388079 3777326 LSA1419 Lactobacillus sakei subsp. sakei 23K GntR family transcriptional regulator YP_396029.1 1387693 R 314315 CDS YP_396030.1 81429030 3777327 complement(1388204..1388968) 1 NC_007576.1 lipase/esterase 1388968 3777327 LSA1420 Lactobacillus sakei subsp. sakei 23K lipase/esterase YP_396030.1 1388204 R 314315 CDS YP_396031.1 81429031 3777328 complement(1389483..1391174) 1 NC_007576.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1391174 argS 3777328 argS Lactobacillus sakei subsp. sakei 23K arginyl-tRNA synthetase YP_396031.1 1389483 R 314315 CDS YP_396032.1 81429032 3777329 complement(1391438..1393378) 1 NC_007576.1 drug ABC exporter, ATP-binding and membrane-spanning/permease subunits 1393378 3777329 LSA1422 Lactobacillus sakei subsp. sakei 23K drug ABC exporter, ATP-binding and membrane-spanning/permease subunits YP_396032.1 1391438 R 314315 CDS YP_396033.1 81429033 3778025 1393844..1394050 1 NC_007576.1 hypothetical protein 1394050 3778025 LSA1423 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396033.1 1393844 D 314315 CDS YP_396034.1 81429034 3778026 1394362..1395954 1 NC_007576.1 L-aspartate ABC transporter 1395954 3778026 LSA1424 Lactobacillus sakei subsp. sakei 23K L-aspartate ABC transporter YP_396034.1 1394362 D 314315 CDS YP_396035.1 81429035 3778027 1396074..1397012 1 NC_007576.1 aminopeptidase 1397012 3778027 LSA1426 Lactobacillus sakei subsp. sakei 23K aminopeptidase YP_396035.1 1396074 D 314315 CDS YP_396036.1 81429036 3778028 complement(1396966..1397754) 1 NC_007576.1 haloacid dehalogenase 1397754 3778028 LSA1427 Lactobacillus sakei subsp. sakei 23K haloacid dehalogenase YP_396036.1 1396966 R 314315 CDS YP_396037.1 81429037 3778029 complement(1397882..1400122) 1 NC_007576.1 copper-transporting P-type ATPase 1400122 3778029 LSA1428 Lactobacillus sakei subsp. sakei 23K copper-transporting P-type ATPase YP_396037.1 1397882 R 314315 CDS YP_396038.1 81429038 3778030 complement(1400153..1400353) 1 NC_007576.1 copper-chaperone/transport protein 1400353 3778030 LSA1429 Lactobacillus sakei subsp. sakei 23K copper-chaperone/transport protein YP_396038.1 1400153 R 314315 CDS YP_396039.1 81429039 3778031 1400732..1401565 1 NC_007576.1 hypothetical protein 1401565 3778031 LSA1430 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396039.1 1400732 D 314315 CDS YP_396040.1 81429040 3778032 complement(1401593..1402312) 1 NC_007576.1 pseudouridylate synthase 1402312 rsuA2 3778032 rsuA2 Lactobacillus sakei subsp. sakei 23K pseudouridylate synthase YP_396040.1 1401593 R 314315 CDS YP_396041.1 81429041 3777991 complement(1402309..1403946) 1 NC_007576.1 drug:Na(+) antiporter (drug efflux pump) 1403946 3777991 LSA1432 Lactobacillus sakei subsp. sakei 23K drug:Na(+) antiporter (drug efflux pump) YP_396041.1 1402309 R 314315 CDS YP_396042.1 81429042 3777992 complement(1404495..1405673) 1 NC_007576.1 MFS family transporter 1405673 3777992 LSA1433 Lactobacillus sakei subsp. sakei 23K MFS family transporter YP_396042.1 1404495 R 314315 CDS YP_396043.1 81429043 3777993 1405823..1406197 1 NC_007576.1 hypothetical protein 1406197 3777993 LSA1434 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396043.1 1405823 D 314315 CDS YP_396044.1 81429044 3777994 complement(1406456..1407808) 1 NC_007576.1 amino acid:H(+) symporter 1407808 3777994 LSA1435 Lactobacillus sakei subsp. sakei 23K amino acid:H(+) symporter YP_396044.1 1406456 R 314315 CDS YP_396045.1 81429045 3777995 complement(1408408..1410831) 1 NC_007576.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 1410831 leuS 3777995 leuS Lactobacillus sakei subsp. sakei 23K leucyl-tRNA synthetase YP_396045.1 1408408 R 314315 CDS YP_396046.1 81429046 3777996 complement(1411165..1413171) 1 NC_007576.1 N-acetylmuramoyl-L-alanine amidase 1413171 3777996 LSA1437 Lactobacillus sakei subsp. sakei 23K N-acetylmuramoyl-L-alanine amidase YP_396046.1 1411165 R 314315 CDS YP_396047.1 81429047 3777997 1413361..1413999 1 NC_007576.1 phosphoesterase 1413999 3777997 LSA1438 Lactobacillus sakei subsp. sakei 23K phosphoesterase YP_396047.1 1413361 D 314315 CDS YP_396048.1 81429048 3777998 1414018..1414578 1 NC_007576.1 methyltransferase 1414578 3777998 LSA1439 Lactobacillus sakei subsp. sakei 23K methyltransferase YP_396048.1 1414018 D 314315 CDS YP_396049.1 81429049 3777983 complement(1414641..1415270) 1 NC_007576.1 CutC family copper homeostasis protein 1415270 cutC 3777983 cutC Lactobacillus sakei subsp. sakei 23K CutC family copper homeostasis protein YP_396049.1 1414641 R 314315 CDS YP_396050.1 81429050 3777984 complement(1415510..1416337) 1 NC_007576.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters disphosphate which reduces the pool of lipid carrier available to the cell; pyrophosphate phosphatase 1416337 bacA 3777984 bacA Lactobacillus sakei subsp. sakei 23K pyrophosphate phosphatase YP_396050.1 1415510 R 314315 CDS YP_396051.1 81429051 3777985 complement(1416481..1417401) 1 NC_007576.1 pseudouridine synthase 1417401 rluA4 3777985 rluA4 Lactobacillus sakei subsp. sakei 23K pseudouridine synthase YP_396051.1 1416481 R 314315 CDS YP_396052.1 81429052 3777986 complement(1417391..1418197) 1 NC_007576.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1418197 ppnK 3777986 ppnK Lactobacillus sakei subsp. sakei 23K inorganic polyphosphate/ATP-NAD kinase YP_396052.1 1417391 R 314315 CDS YP_396053.1 81429053 3777987 complement(1418194..1418868) 1 NC_007576.1 hypothetical protein 1418868 3777987 LSA1444 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396053.1 1418194 R 314315 CDS YP_396054.1 81429054 3777988 1419015..1419596 1 NC_007576.1 hypothetical protein 1419596 3777988 LSA1445 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396054.1 1419015 D 314315 CDS YP_396055.1 81429055 3777989 1419674..1420318 1 NC_007576.1 hypothetical protein 1420318 3777989 LSA1446 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396055.1 1419674 D 314315 CDS YP_396056.1 81429056 3777990 complement(1420371..1421345) 1 NC_007576.1 hypothetical protein 1421345 3777990 LSA1447 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396056.1 1420371 R 314315 CDS YP_396057.1 81429057 3777975 complement(1421409..1422098) 1 NC_007576.1 enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence; adaptor protein 1422098 mecA 3777975 mecA Lactobacillus sakei subsp. sakei 23K adaptor protein YP_396057.1 1421409 R 314315 CDS YP_396058.1 81429058 3777976 complement(1422271..1422669) 1 NC_007576.1 transcriptional regulator Spx 1422669 spxA 3777976 spxA Lactobacillus sakei subsp. sakei 23K transcriptional regulator Spx YP_396058.1 1422271 R 314315 CDS YP_396059.1 81429059 3777977 complement(1422996..1423736) 1 NC_007576.1 beta-lactamase hydrolase 1423736 3777977 LSA1450 Lactobacillus sakei subsp. sakei 23K beta-lactamase hydrolase YP_396059.1 1422996 R 314315 CDS YP_396060.1 81429060 3777978 complement(1423866..1424651) 1 NC_007576.1 hypothetical protein 1424651 3777978 LSA1451 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396060.1 1423866 R 314315 CDS YP_396061.1 81429061 3777979 complement(1424669..1426768) 1 NC_007576.1 ABC transporter permease/transmembrane protein 1426768 3777979 LSA1452 Lactobacillus sakei subsp. sakei 23K ABC transporter permease/transmembrane protein YP_396061.1 1424669 R 314315 CDS YP_396062.1 81429062 3777980 complement(1426746..1427522) 1 NC_007576.1 ABC transporter ATP-binding protein 1427522 3777980 LSA1453 Lactobacillus sakei subsp. sakei 23K ABC transporter ATP-binding protein YP_396062.1 1426746 R 314315 CDS YP_396063.1 81429063 3777981 1427662..1428336 1 NC_007576.1 two-component system response regulator 1428336 3777981 LSA1454 Lactobacillus sakei subsp. sakei 23K two-component system response regulator YP_396063.1 1427662 D 314315 CDS YP_396064.1 81429064 3777982 1428346..1429365 1 NC_007576.1 two-component system sensor histidine kinase 1429365 3777982 LSA1455 Lactobacillus sakei subsp. sakei 23K two-component system sensor histidine kinase YP_396064.1 1428346 D 314315 CDS YP_396065.1 81429065 3777967 1429524..1430690 1 NC_007576.1 lipoprotein precursor 1430690 3777967 LSA1456 Lactobacillus sakei subsp. sakei 23K lipoprotein precursor YP_396065.1 1429524 D 314315 CDS YP_396066.1 81429066 3777968 complement(1430724..1432019) 1 NC_007576.1 PTS system cellobiose transporter subunit IIC 1432019 3777968 LSA1457 Lactobacillus sakei subsp. sakei 23K PTS system cellobiose transporter subunit IIC YP_396066.1 1430724 R 314315 CDS YP_396067.1 81429067 3777969 complement(1432266..1432847) 1 NC_007576.1 anaerobic ribonucleotide reductase activator protein 1432847 nrdG 3777969 nrdG Lactobacillus sakei subsp. sakei 23K anaerobic ribonucleotide reductase activator protein YP_396067.1 1432266 R 314315 CDS YP_396068.1 81429068 3777970 complement(1432875..1435091) 1 NC_007576.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 1435091 nrdD 3777970 nrdD Lactobacillus sakei subsp. sakei 23K anaerobic ribonucleoside triphosphate reductase YP_396068.1 1432875 R 314315 CDS YP_396069.1 81429069 3777971 complement(1435292..1437331) 1 NC_007576.1 copper-transporting P-type ATPase 1437331 atkB 3777971 atkB Lactobacillus sakei subsp. sakei 23K copper-transporting P-type ATPase YP_396069.1 1435292 R 314315 CDS YP_396070.1 81429070 3777972 complement(1437334..1437774) 1 NC_007576.1 negative regulator of copper transport operon, AtkY 1437774 atkY 3777972 atkY Lactobacillus sakei subsp. sakei 23K negative regulator of copper transport operon, AtkY YP_396070.1 1437334 R 314315 CDS YP_396071.1 81429071 3777973 complement(1437923..1439647) 1 NC_007576.1 phosphoenolpyruvate-protein phosphotransferase(phosphotransferase system, enzyme I) 1439647 ptsI 3777973 ptsI Lactobacillus sakei subsp. sakei 23K phosphoenolpyruvate-protein phosphotransferase(phosphotransferase system, enzyme I) YP_396071.1 1437923 R 314315 CDS YP_396072.1 81429072 3777974 complement(1439647..1439913) 1 NC_007576.1 phosphocarrier protein HPr 1439913 ptsH 3777974 ptsH Lactobacillus sakei subsp. sakei 23K phosphocarrier protein HPr YP_396072.1 1439647 R 314315 CDS YP_396073.1 81429073 3777846 complement(1440056..1440247) 1 NC_007576.1 hypothetical protein 1440247 3777846 LSA1464 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396073.1 1440056 R 314315 CDS YP_396074.1 81429074 3777847 1440481..1442646 1 NC_007576.1 ATPase/chaperone ClpE, specificity factor for ClpP protease 1442646 clpE 3777847 clpE Lactobacillus sakei subsp. sakei 23K ATPase/chaperone ClpE, specificity factor for ClpP protease YP_396074.1 1440481 D 314315 CDS YP_396075.1 81429075 3777848 1442754..1443050 1 NC_007576.1 hypothetical protein 1443050 3777848 LSA1466 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396075.1 1442754 D 314315 CDS YP_396076.1 81429076 3777849 1443175..1443597 1 NC_007576.1 hypothetical protein 1443597 3777849 LSA1467 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396076.1 1443175 D 314315 CDS YP_396077.1 81429077 3777850 1443804..1444889 1 NC_007576.1 hypothetical protein 1444889 3777850 LSA1468 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396077.1 1443804 D 314315 CDS YP_396078.1 81429078 3777851 complement(1445002..1446579) 1 NC_007576.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 1446579 prfC 3777851 prfC Lactobacillus sakei subsp. sakei 23K peptide chain release factor 3 YP_396078.1 1445002 R 314315 CDS YP_396079.1 81429079 3777852 complement(1446610..1447950) 1 NC_007576.1 ion Mg(2+)/C(o2+) transport protein, hemolysinC related 1447950 3777852 LSA1470 Lactobacillus sakei subsp. sakei 23K ion Mg(2+)/C(o2+) transport protein, hemolysinC related YP_396079.1 1446610 R 314315 CDS YP_396080.1 81429080 3777853 complement(1448089..1449195) 1 NC_007576.1 transporter 1449195 3777853 LSA1471 Lactobacillus sakei subsp. sakei 23K transporter YP_396080.1 1448089 R 314315 CDS YP_396081.1 81429081 3777837 1449323..1449754 1 NC_007576.1 GNAT family acetyltransferase 1449754 3777837 LSA1472 Lactobacillus sakei subsp. sakei 23K GNAT family acetyltransferase YP_396081.1 1449323 D 314315 CDS YP_396082.1 81429082 3777838 1449830..1450303 1 NC_007576.1 hypothetical protein 1450303 3777838 LSA1473 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396082.1 1449830 D 314315 CDS YP_396083.1 81429083 3777839 1450436..1452145 1 NC_007576.1 bifunctional glycolsyltransferase/transpeptidase penicillin binding protein 1452145 3777839 LSA1474 Lactobacillus sakei subsp. sakei 23K bifunctional glycolsyltransferase/transpeptidase penicillin binding protein YP_396083.1 1450436 D 314315 CDS YP_396084.1 81429084 3777840 complement(1452214..1452750) 1 NC_007576.1 hypothetical protein 1452750 3777840 LSA1475 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396084.1 1452214 R 314315 CDS YP_396085.1 81429085 3777841 complement(1452837..1453940) 1 NC_007576.1 A/G-specific adenine glycosylase 1453940 3777841 LSA1476 Lactobacillus sakei subsp. sakei 23K A/G-specific adenine glycosylase YP_396085.1 1452837 R 314315 CDS YP_396086.1 81429086 3777842 complement(1453927..1454766) 1 NC_007576.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 1454766 recX 3777842 recX Lactobacillus sakei subsp. sakei 23K recombination regulator RecX YP_396086.1 1453927 R 314315 CDS YP_396087.1 81429087 3777843 complement(1454735..1454914) 1 NC_007576.1 hypothetical protein 1454914 3777843 LSA1478 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396087.1 1454735 R 314315 CDS YP_396088.1 81429088 3777844 1455300..1456691 1 NC_007576.1 TrmA family RNA methyltransferase 1456691 3777844 LSA1479 Lactobacillus sakei subsp. sakei 23K TrmA family RNA methyltransferase YP_396088.1 1455300 D 314315 CDS YP_396089.1 81429089 3777845 complement(1456907..1457413) 1 NC_007576.1 hypothetical protein 1457413 3777845 LSA1480 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396089.1 1456907 R 314315 CDS YP_396090.1 81429090 3777821 1457504..1457974 1 NC_007576.1 hypothetical protein 1457974 3777821 LSA1481 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396090.1 1457504 D 314315 CDS YP_396091.1 81429091 3777822 1458061..1458303 1 NC_007576.1 hypothetical protein 1458303 3777822 LSA1482 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396091.1 1458061 D 314315 CDS YP_396093.1 81429093 3777824 complement(1459083..1460246) 1 NC_007576.1 hydroxymethylglutaryl-CoA synthase 1460246 mvaS 3777824 mvaS Lactobacillus sakei subsp. sakei 23K hydroxymethylglutaryl-CoA synthase YP_396093.1 1459083 R 314315 CDS YP_396094.1 81429094 3777825 complement(1460261..1461529) 1 NC_007576.1 hydroxymethylglutaryl-CoA reductase 1461529 mvaA 3777825 mvaA Lactobacillus sakei subsp. sakei 23K hydroxymethylglutaryl-CoA reductase YP_396094.1 1460261 R 314315 CDS YP_396095.1 81429095 3777826 complement(1461522..1462718) 1 NC_007576.1 acetyl-CoA C-acetyltransferase 1462718 3777826 LSA1486 Lactobacillus sakei subsp. sakei 23K acetyl-CoA C-acetyltransferase YP_396095.1 1461522 R 314315 CDS YP_396096.1 81429096 3777827 1462913..1463125 1 NC_007576.1 hypothetical protein 1463125 3777827 LSA1487 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396096.1 1462913 D 314315 CDS YP_396097.1 81429097 3777828 1463158..1463379 1 NC_007576.1 hypothetical protein 1463379 3777828 LSA1488 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396097.1 1463158 D 314315 CDS YP_396098.1 81429098 3777813 1463572..1464177 1 NC_007576.1 hypothetical protein 1464177 3777813 LSA1489 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396098.1 1463572 D 314315 CDS YP_396099.1 81429099 3777814 1464174..1464395 1 NC_007576.1 hypothetical protein 1464395 3777814 LSA1490 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396099.1 1464174 D 314315 CDS YP_396100.1 81429100 3777815 1464382..1464681 1 NC_007576.1 hypothetical protein 1464681 3777815 LSA1491 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396100.1 1464382 D 314315 CDS YP_396101.1 81429101 3777816 complement(1464678..1465496) 1 NC_007576.1 hypothetical protein 1465496 3777816 LSA1492 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396101.1 1464678 R 314315 CDS YP_396102.1 81429102 3777817 1465653..1466543 1 NC_007576.1 diacylglycerol kinase 1466543 3777817 LSA1493 Lactobacillus sakei subsp. sakei 23K diacylglycerol kinase YP_396102.1 1465653 D 314315 CDS YP_396103.1 81429103 3777818 complement(1466584..1467480) 1 NC_007576.1 hypothetical protein 1467480 3777818 LSA1494 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396103.1 1466584 R 314315 CDS YP_396104.1 81429104 3777819 complement(1467578..1468582) 1 NC_007576.1 dTDP-glucose 4,6-dehydratase 1468582 rfbB 3777819 rfbB Lactobacillus sakei subsp. sakei 23K dTDP-glucose 4,6-dehydratase YP_396104.1 1467578 R 314315 CDS YP_396105.1 81429105 3777820 complement(1468685..1469419) 1 NC_007576.1 glutamine/glutamate ABC transporter ATP-binding subunit 1469419 3777820 LSA1496 Lactobacillus sakei subsp. sakei 23K glutamine/glutamate ABC transporter ATP-binding subunit YP_396105.1 1468685 R 314315 CDS YP_396106.1 81429106 3777781 complement(1469419..1470855) 1 NC_007576.1 glutamine/glutamate ABC transporter, membrane-spanning/substrate-binding protein 1470855 3777781 LSA1497 Lactobacillus sakei subsp. sakei 23K glutamine/glutamate ABC transporter, membrane-spanning/substrate-binding protein YP_396106.1 1469419 R 314315 CDS YP_396107.1 81429107 3777782 complement(1471062..1471496) 1 NC_007576.1 hypothetical protein 1471496 3777782 LSA1498 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396107.1 1471062 R 314315 CDS YP_396108.1 81429108 3777783 1471889..1472299 1 NC_007576.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1472299 def2 3777783 def2 Lactobacillus sakei subsp. sakei 23K peptide deformylase YP_396108.1 1471889 D 314315 CDS YP_396109.1 81429109 3777784 1472666..1473397 1 NC_007576.1 two-component system response regulator 1473397 3777784 LSA1500 Lactobacillus sakei subsp. sakei 23K two-component system response regulator YP_396109.1 1472666 D 314315 CDS YP_396110.1 81429110 3777785 1473390..1474718 1 NC_007576.1 two-component system sensor histidine kinase 1474718 3777785 LSA1501 Lactobacillus sakei subsp. sakei 23K two-component system sensor histidine kinase YP_396110.1 1473390 D 314315 CDS YP_396112.1 81429111 3777786 1474756..1475310 1 NC_007576.1 hypothetical protein 1475310 3777786 LSA1503 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396112.1 1474756 D 314315 CDS YP_396113.1 81429112 3777787 1475285..1475422 1 NC_007576.1 hypothetical protein 1475422 3777787 LSA1504 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396113.1 1475285 D 314315 CDS YP_396114.1 81429113 3777788 complement(1475500..1475580) 1 NC_007576.1 hypothetical protein 1475580 3777788 LSA1506 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396114.1 1475500 R 314315 CDS YP_396115.1 81429114 3776908 complement(1475623..1476525) 1 NC_007576.1 UTP-glucose-1-phosphate uridylyltransferase 1476525 galU 3776908 galU Lactobacillus sakei subsp. sakei 23K UTP-glucose-1-phosphate uridylyltransferase YP_396115.1 1475623 R 314315 CDS YP_396116.1 81429115 3776909 1476717..1477538 1 NC_007576.1 hypothetical protein 1477538 3776909 LSA1508 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396116.1 1476717 D 314315 CDS YP_396117.1 81429116 3776910 1477743..1478291 1 NC_007576.1 hypothetical protein 1478291 3776910 LSA1509 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396117.1 1477743 D 314315 CDS YP_396118.1 81429117 3776911 complement(1478855..1480345) 1 NC_007576.1 teichoic acid/polysaccharide export protein 1480345 3776911 LSA1510_a Lactobacillus sakei subsp. sakei 23K teichoic acid/polysaccharide export protein YP_396118.1 1478855 R 314315 CDS YP_396119.1 81429118 3776912 complement(1480351..1481376) 1 NC_007576.1 hypothetical protein 1481376 3776912 LSA1510_b Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396119.1 1480351 R 314315 CDS YP_396120.1 81429119 3776913 complement(1481358..1482632) 1 NC_007576.1 hypothetical protein 1482632 3776913 LSA1510_c Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396120.1 1481358 R 314315 CDS YP_396121.1 81429120 3776914 complement(1482616..1483596) 1 NC_007576.1 glycosyl transferase family protein 1483596 3776914 LSA1510_d Lactobacillus sakei subsp. sakei 23K glycosyl transferase family protein YP_396121.1 1482616 R 314315 CDS YP_396122.1 81429121 3776915 complement(1483603..1484667) 1 NC_007576.1 group 1 glycosyl transferase 1484667 3776915 LSA1510_e Lactobacillus sakei subsp. sakei 23K group 1 glycosyl transferase YP_396122.1 1483603 R 314315 CDS YP_396123.1 81429122 3777145 complement(1484685..1485599) 1 NC_007576.1 glycosyl transferase family protein 1485599 3777145 LSA1510_f Lactobacillus sakei subsp. sakei 23K glycosyl transferase family protein YP_396123.1 1484685 R 314315 CDS YP_396124.1 81429123 3777146 complement(1485657..1486352) 1 NC_007576.1 priming glycosyl transferase 1486352 3777146 LSA1510_g Lactobacillus sakei subsp. sakei 23K priming glycosyl transferase YP_396124.1 1485657 R 314315 CDS YP_396125.1 81429124 3777147 complement(1486375..1487121) 1 NC_007576.1 polysaccharide biosynthesis protein, chain length determination 1487121 3777147 LSA1511 Lactobacillus sakei subsp. sakei 23K polysaccharide biosynthesis protein, chain length determination YP_396125.1 1486375 R 314315 CDS YP_396126.1 81429125 3777148 complement(1487128..1487868) 1 NC_007576.1 polysaccharide biosynthesis protein, chain length determination 1487868 3777148 LSA1512 Lactobacillus sakei subsp. sakei 23K polysaccharide biosynthesis protein, chain length determination YP_396126.1 1487128 R 314315 CDS YP_396127.1 81429126 3777149 complement(1487955..1488926) 1 NC_007576.1 transcriptional regulator 1488926 3777149 LSA1513 Lactobacillus sakei subsp. sakei 23K transcriptional regulator YP_396127.1 1487955 R 314315 CDS YP_396128.1 81429127 3777150 complement(1489061..1489999) 1 NC_007576.1 ribonuclease 1489999 3777150 LSA1514 Lactobacillus sakei subsp. sakei 23K ribonuclease YP_396128.1 1489061 R 314315 CDS YP_396129.1 81429128 3777151 complement(1490240..1491037) 1 NC_007576.1 methionyl aminopeptidase M 1491037 pepM 3777151 pepM Lactobacillus sakei subsp. sakei 23K methionyl aminopeptidase M YP_396129.1 1490240 R 314315 CDS YP_396130.1 81429129 3777152 1491300..1491752 1 NC_007576.1 flavodoxin 1491752 3777152 LSA1516 Lactobacillus sakei subsp. sakei 23K flavodoxin YP_396130.1 1491300 D 314315 CDS YP_396131.1 81429130 3776916 1492332..1492814 1 NC_007576.1 teichoic acid glycosylation protein 1492814 gtcA1 3776916 gtcA1 Lactobacillus sakei subsp. sakei 23K teichoic acid glycosylation protein YP_396131.1 1492332 D 314315 CDS YP_396132.1 81429131 3776917 1492807..1493229 1 NC_007576.1 teichoic acid glycosylation protein 1493229 gtcA2 3776917 gtcA2 Lactobacillus sakei subsp. sakei 23K teichoic acid glycosylation protein YP_396132.1 1492807 D 314315 CDS YP_396133.1 81429132 3776918 1493231..1494163 1 NC_007576.1 teichoic acid/polysaccharide glycosyl transferase 1494163 3776918 LSA1519 Lactobacillus sakei subsp. sakei 23K teichoic acid/polysaccharide glycosyl transferase YP_396133.1 1493231 D 314315 CDS YP_396134.1 81429133 3776919 complement(1494222..1495361) 1 NC_007576.1 UDP-N-acetylglucosamine 2-epimerase 1495361 mnaA 3776919 mnaA Lactobacillus sakei subsp. sakei 23K UDP-N-acetylglucosamine 2-epimerase YP_396134.1 1494222 R 314315 CDS YP_396135.1 81429134 3776920 complement(1495458..1496015) 1 NC_007576.1 TetR family transcriptional regulator 1496015 3776920 LSA1521 Lactobacillus sakei subsp. sakei 23K TetR family transcriptional regulator YP_396135.1 1495458 R 314315 CDS YP_396136.1 81429135 3776921 1496180..1497412 1 NC_007576.1 aminopeptidase 1497412 pepS 3776921 pepS Lactobacillus sakei subsp. sakei 23K aminopeptidase YP_396136.1 1496180 D 314315 CDS YP_396137.1 81429136 3776922 1497430..1497603 1 NC_007576.1 hypothetical protein 1497603 3776922 LSA1523 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396137.1 1497430 D 314315 CDS YP_396138.1 81429137 3776923 1497813..1498523 1 NC_007576.1 hypothetical protein 1498523 3776923 LSA1524 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396138.1 1497813 D 314315 CDS YP_396139.1 81429138 3777059 1498665..1498985 1 NC_007576.1 small multidrug resistance efflux protein 1498985 3777059 LSA1525 Lactobacillus sakei subsp. sakei 23K small multidrug resistance efflux protein YP_396139.1 1498665 D 314315 CDS YP_396140.1 81429139 3777060 complement(1499017..1499361) 1 NC_007576.1 hypothetical protein 1499361 3777060 LSA1526 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396140.1 1499017 R 314315 CDS YP_396141.1 81429140 3777061 complement(1499463..1500326) 1 NC_007576.1 fructose-bisphosphate aldolase 1500326 fba 3777061 fba Lactobacillus sakei subsp. sakei 23K fructose-bisphosphate aldolase YP_396141.1 1499463 R 314315 CDS YP_396142.1 81429141 3777062 complement(1500801..1500974) 1 NC_007576.1 aromatic acid transporter 1500974 3777062 LSA1528 Lactobacillus sakei subsp. sakei 23K aromatic acid transporter YP_396142.1 1500801 R 314315 CDS YP_396143.1 81429142 3777063 complement(1500983..1501996) 1 NC_007576.1 aromatic acid transporter 1501996 3777063 LSA1529 Lactobacillus sakei subsp. sakei 23K aromatic acid transporter YP_396143.1 1500983 R 314315 CDS YP_396144.1 81429143 3777064 complement(1502069..1502596) 1 NC_007576.1 small molecules-binding protein 1502596 3777064 LSA1530 Lactobacillus sakei subsp. sakei 23K small molecules-binding protein YP_396144.1 1502069 R 314315 CDS YP_396145.1 81429144 3777065 complement(1502838..1504286) 1 NC_007576.1 beta-glucosidase 1504286 3777065 LSA1531 Lactobacillus sakei subsp. sakei 23K beta-glucosidase YP_396145.1 1502838 R 314315 CDS YP_396146.1 81429145 3777066 complement(1504302..1504724) 1 NC_007576.1 hypothetical protein 1504724 3777066 LSA1532 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396146.1 1504302 R 314315 CDS YP_396147.1 81429146 3777067 complement(1504751..1505086) 1 NC_007576.1 PTS system cellobiose transporter subunit IIA 1505086 3777067 LSA1533 Lactobacillus sakei subsp. sakei 23K PTS system cellobiose transporter subunit IIA YP_396147.1 1504751 R 314315 CDS YP_396148.1 81429147 3776965 complement(1505389..1506735) 1 NC_007576.1 ATP-dependent RNA helicase 1506735 3776965 LSA1534 Lactobacillus sakei subsp. sakei 23K ATP-dependent RNA helicase YP_396148.1 1505389 R 314315 CDS YP_396149.1 81429148 3776966 complement(1506748..1507746) 1 NC_007576.1 oxidoreductase 1507746 3776966 LSA1535 Lactobacillus sakei subsp. sakei 23K oxidoreductase YP_396149.1 1506748 R 314315 CDS YP_396150.1 81429149 3776967 1507960..1508304 1 NC_007576.1 hypothetical protein 1508304 3776967 LSA1536 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396150.1 1507960 D 314315 CDS YP_396151.1 81429150 3776968 complement(1508470..1508847) 1 NC_007576.1 hypothetical protein 1508847 3776968 LSA1537 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396151.1 1508470 R 314315 CDS YP_396152.1 81429151 3776969 complement(1508863..1509612) 1 NC_007576.1 glycosyl hydrolase 1509612 3776969 LSA1538 Lactobacillus sakei subsp. sakei 23K glycosyl hydrolase YP_396152.1 1508863 R 314315 CDS YP_396153.1 81429152 3776970 1509758..1509952 1 NC_007576.1 hypothetical protein 1509952 3776970 LSA1539 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396153.1 1509758 D 314315 CDS YP_396154.1 81429153 3776971 1509980..1510897 1 NC_007576.1 hypothetical protein 1510897 3776971 LSA1540 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396154.1 1509980 D 314315 CDS YP_396155.1 81429154 3776972 complement(1510996..1511883) 1 NC_007576.1 extracellular lipase/esterase 1511883 3776972 LSA1541 Lactobacillus sakei subsp. sakei 23K extracellular lipase/esterase YP_396155.1 1510996 R 314315 CDS YP_396156.1 81429155 3777313 complement(1511876..1512949) 1 NC_007576.1 phosphotransferase system, enzyme IIC (C-terminal fragment), authentic frameshift 1512949 3777313 LSA1542 Lactobacillus sakei subsp. sakei 23K phosphotransferase system, enzyme IIC (C-terminal fragment), authentic frameshift YP_396156.1 1511876 R 314315 CDS YP_396157.1 81429156 3777314 complement(1512954..1513160) 1 NC_007576.1 phosphotransferase system, enzyme IIC (N-terminal fragment), authentic frameshift 1513160 3777314 LSA1543 Lactobacillus sakei subsp. sakei 23K phosphotransferase system, enzyme IIC (N-terminal fragment), authentic frameshift YP_396157.1 1512954 R 314315 CDS YP_396158.1 81429157 3777315 complement(1513347..1514711) 1 NC_007576.1 RNA methyltransferase 1514711 3777315 LSA1544 Lactobacillus sakei subsp. sakei 23K RNA methyltransferase YP_396158.1 1513347 R 314315 CDS YP_396159.1 81429158 3777316 complement(1514794..1515822) 1 NC_007576.1 similar to YegS from E. coli; lipid kinase 1515822 3777316 LSA1545 Lactobacillus sakei subsp. sakei 23K lipid kinase YP_396159.1 1514794 R 314315 CDS YP_396160.1 81429159 3777317 complement(1515843..1517273) 1 NC_007576.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 1517273 gatB 3777317 gatB Lactobacillus sakei subsp. sakei 23K aspartyl/glutamyl-tRNA amidotransferase subunit B YP_396160.1 1515843 R 314315 CDS YP_396161.1 81429160 3777318 complement(1517273..1518739) 1 NC_007576.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 1518739 gatA 3777318 gatA Lactobacillus sakei subsp. sakei 23K aspartyl/glutamyl-tRNA amidotransferase subunit A YP_396161.1 1517273 R 314315 CDS YP_396162.1 81429161 3777319 complement(1518742..1519038) 1 NC_007576.1 glutamyl-tRNA amidotransferase, subunit C 1519038 gatC 3777319 gatC Lactobacillus sakei subsp. sakei 23K glutamyl-tRNA amidotransferase, subunit C YP_396162.1 1518742 R 314315 CDS YP_396163.1 81429162 3777320 1519368..1519952 1 NC_007576.1 hypothetical protein 1519952 3777320 LSA1549 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396163.1 1519368 D 314315 CDS YP_396164.1 81429163 3777000 complement(1520008..1521135) 1 NC_007576.1 lipoprotein precursor 1521135 3777000 LSA1550 Lactobacillus sakei subsp. sakei 23K lipoprotein precursor YP_396164.1 1520008 R 314315 CDS YP_396165.1 81429164 3777001 complement(1521218..1523251) 1 NC_007576.1 NAD-dependent DNA ligase 1523251 ligA 3777001 ligA Lactobacillus sakei subsp. sakei 23K NAD-dependent DNA ligase YP_396165.1 1521218 R 314315 CDS YP_396166.1 81429165 3777002 complement(1523766..1526015) 1 NC_007576.1 ATP-dependent DNA helicase 1526015 pcrA 3777002 pcrA Lactobacillus sakei subsp. sakei 23K ATP-dependent DNA helicase YP_396166.1 1523766 R 314315 CDS YP_396167.1 81429166 3777003 1526189..1527013 1 NC_007576.1 haloacid dehalogenase 1527013 3777003 LSA1553 Lactobacillus sakei subsp. sakei 23K haloacid dehalogenase YP_396167.1 1526189 D 314315 CDS YP_396168.1 81429167 3777004 1527018..1527956 1 NC_007576.1 LacI family transcriptional regulator 1527956 3777004 LSA1554 Lactobacillus sakei subsp. sakei 23K LacI family transcriptional regulator YP_396168.1 1527018 D 314315 CDS YP_396169.1 81429168 3777005 complement(1528041..1529333) 1 NC_007576.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1529333 purB2 3777005 purB2 Lactobacillus sakei subsp. sakei 23K adenylosuccinate lyase YP_396169.1 1528041 R 314315 CDS YP_396170.1 81429169 3777006 complement(1529389..1530501) 1 NC_007576.1 phosphoribosylaminoimidazole carboxylase ATPase 1530501 purK2 3777006 purK2 Lactobacillus sakei subsp. sakei 23K phosphoribosylaminoimidazole carboxylase ATPase YP_396170.1 1529389 R 314315 CDS YP_396171.1 81429170 3777007 complement(1530643..1531230) 1 NC_007576.1 Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase 1531230 xpt 3777007 xpt Lactobacillus sakei subsp. sakei 23K xanthine phosphoribosyltransferase YP_396171.1 1530643 R 314315 CDS YP_396172.1 81429171 3777153 complement(1531356..1532015) 1 NC_007576.1 N-acetylmuramoyl-L-alanine amidase 1532015 3777153 LSA1558 Lactobacillus sakei subsp. sakei 23K N-acetylmuramoyl-L-alanine amidase YP_396172.1 1531356 R 314315 CDS YP_396173.1 81429172 3777154 1532173..1533159 1 NC_007576.1 oxidoreductase 1533159 3777154 LSA1559 Lactobacillus sakei subsp. sakei 23K oxidoreductase YP_396173.1 1532173 D 314315 CDS YP_396174.1 81429173 3777155 complement(1533229..1533690) 1 NC_007576.1 GNAT family acetyltransferase 1533690 3777155 LSA1560 Lactobacillus sakei subsp. sakei 23K GNAT family acetyltransferase YP_396174.1 1533229 R 314315 CDS YP_396175.1 81429174 3777156 complement(1533764..1533964) 1 NC_007576.1 cold shock protein CspA family protein 1533964 csp3 3777156 csp3 Lactobacillus sakei subsp. sakei 23K cold shock protein CspA family protein YP_396175.1 1533764 R 314315 CDS YP_396176.1 81429175 3777157 1534275..1534913 1 NC_007576.1 lipoprotein precursor 1534913 3777157 LSA1562 Lactobacillus sakei subsp. sakei 23K lipoprotein precursor YP_396176.1 1534275 D 314315 CDS YP_396177.1 81429176 3777158 complement(1534963..1535556) 1 NC_007576.1 hypothetical protein 1535556 3777158 LSA1563 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396177.1 1534963 R 314315 CDS YP_396178.1 81429177 3777159 1535857..1536318 1 NC_007576.1 GNAT family acetyltransferase 1536318 3777159 LSA1564 Lactobacillus sakei subsp. sakei 23K GNAT family acetyltransferase YP_396178.1 1535857 D 314315 CDS YP_396179.1 81429178 3777160 complement(1536397..1536852) 1 NC_007576.1 hypothetical protein 1536852 3777160 LSA1565 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396179.1 1536397 R 314315 CDS YP_396180.1 81429179 3778146 complement(1536852..1539029) 1 NC_007576.1 transcription accessory protein, RNA-binding 1539029 3778146 LSA1566 Lactobacillus sakei subsp. sakei 23K transcription accessory protein, RNA-binding YP_396180.1 1536852 R 314315 CDS YP_396181.1 81429180 3778147 complement(1539095..1539529) 1 NC_007576.1 hypothetical protein 1539529 3778147 LSA1567 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396181.1 1539095 R 314315 CDS YP_396182.1 81429181 3778148 complement(1539814..1542477) 1 NC_007576.1 calcium-transporting P-type ATPase 1542477 3778148 LSA1568 Lactobacillus sakei subsp. sakei 23K calcium-transporting P-type ATPase YP_396182.1 1539814 R 314315 CDS YP_396183.1 81429182 3778149 complement(1543187..1544014) 1 NC_007576.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1544014 nadE 3778149 nadE Lactobacillus sakei subsp. sakei 23K NAD synthetase YP_396183.1 1543187 R 314315 CDS YP_396184.1 81429183 3778150 complement(1544046..1545509) 1 NC_007576.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1545509 nadC 3778150 nadC Lactobacillus sakei subsp. sakei 23K nicotinate phosphoribosyltransferase YP_396184.1 1544046 R 314315 CDS YP_396185.1 81429184 3778151 1545608..1546336 1 NC_007576.1 N-acetylglucosamyldiphospho-undecaprenol-N- acetyl-beta-D-mannosaminyltransferase 1546336 tagA 3778151 tagA Lactobacillus sakei subsp. sakei 23K N-acetylglucosamyldiphospho-undecaprenol-N- acetyl-beta-D-mannosaminyltransferase YP_396185.1 1545608 D 314315 CDS YP_396186.1 81429185 3778152 complement(1546380..1547333) 1 NC_007576.1 teichoic acid/polysaccharide glycosyl transferase 1547333 3778152 LSA1572 Lactobacillus sakei subsp. sakei 23K teichoic acid/polysaccharide glycosyl transferase YP_396186.1 1546380 R 314315 CDS YP_396187.1 81429186 3778153 complement(1547354..1548430) 1 NC_007576.1 teichoic acid/polysaccharide glycosyl transferase, group 1 1548430 3778153 LSA1573 Lactobacillus sakei subsp. sakei 23K teichoic acid/polysaccharide glycosyl transferase, group 1 YP_396187.1 1547354 R 314315 CDS YP_396188.1 81429187 3778750 complement(1548453..1548839) 1 NC_007576.1 glycerol-3-phosphate cytidyltransferase 1548839 tagD 3778750 tagD Lactobacillus sakei subsp. sakei 23K glycerol-3-phosphate cytidyltransferase YP_396188.1 1548453 R 314315 CDS YP_396189.1 81429188 3778751 complement(1548846..1550261) 1 NC_007576.1 teichoic acid/polysaccharide export protein 1550261 3778751 LSA1575 Lactobacillus sakei subsp. sakei 23K teichoic acid/polysaccharide export protein YP_396189.1 1548846 R 314315 CDS YP_396190.1 81429189 3778752 complement(1550263..1551408) 1 NC_007576.1 CDP-glycerol:glycerophosphate glycerophosphotransferase 1551408 tagB 3778752 tagB Lactobacillus sakei subsp. sakei 23K CDP-glycerol:glycerophosphate glycerophosphotransferase YP_396190.1 1550263 R 314315 CDS YP_396191.1 81429190 3778753 complement(1551386..1552945) 1 NC_007576.1 hypothetical protein 1552945 3778753 LSA1577 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396191.1 1551386 R 314315 CDS YP_396192.1 81429191 3778754 complement(1552964..1553812) 1 NC_007576.1 teichoic acid/polysaccharide biosynthesis protein 1553812 3778754 LSA1578 Lactobacillus sakei subsp. sakei 23K teichoic acid/polysaccharide biosynthesis protein YP_396192.1 1552964 R 314315 CDS YP_396193.1 81429192 3778755 complement(1553850..1555391) 1 NC_007576.1 teichoic acid/polysaccharide export protein 1555391 3778755 LSA1579 Lactobacillus sakei subsp. sakei 23K teichoic acid/polysaccharide export protein YP_396193.1 1553850 R 314315 CDS YP_396194.1 81429193 3778756 complement(1555445..1556896) 1 NC_007576.1 hypothetical protein 1556896 3778756 LSA1580 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396194.1 1555445 R 314315 CDS YP_396195.1 81429194 3778757 complement(1557090..1559174) 1 NC_007576.1 teichoic acid-binding N-acetylmuramoyl L-alalanine amidase 1559174 3778757 LSA1581 Lactobacillus sakei subsp. sakei 23K teichoic acid-binding N-acetylmuramoyl L-alalanine amidase YP_396195.1 1557090 R 314315 CDS YP_396196.1 81429195 3777600 complement(1559220..1559456) 1 NC_007576.1 small cell surface protein 1559456 3777600 LSA1582 Lactobacillus sakei subsp. sakei 23K small cell surface protein YP_396196.1 1559220 R 314315 CDS YP_396197.1 81429196 3777601 complement(1559459..1559884) 1 NC_007576.1 hypothetical protein 1559884 3777601 LSA1583 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396197.1 1559459 R 314315 CDS YP_396198.1 81429197 3777602 complement(1559978..1561522) 1 NC_007576.1 teichoic acid/polysaccharide glycosyl transferase 1561522 3777602 LSA1584 Lactobacillus sakei subsp. sakei 23K teichoic acid/polysaccharide glycosyl transferase YP_396198.1 1559978 R 314315 CDS YP_396199.1 81429198 3777603 complement(1561596..1563635) 1 NC_007576.1 teichoic acid/polysaccharide phosphoglycerol transferase 1563635 3777603 LSA1585 Lactobacillus sakei subsp. sakei 23K teichoic acid/polysaccharide phosphoglycerol transferase YP_396199.1 1561596 R 314315 CDS YP_396200.1 81429199 3777604 complement(1564019..1564720) 1 NC_007576.1 GntR family transcriptional regulator 1564720 3777604 LSA1587 Lactobacillus sakei subsp. sakei 23K GntR family transcriptional regulator YP_396200.1 1564019 R 314315 CDS YP_396201.1 81429200 3777605 complement(1564739..1565878) 1 NC_007576.1 N-acetylglucosamine-6-phosphate deacetylase 1565878 nagA 3777605 nagA Lactobacillus sakei subsp. sakei 23K N-acetylglucosamine-6-phosphate deacetylase YP_396201.1 1564739 R 314315 CDS YP_396202.1 81429201 3777606 1566020..1566940 1 NC_007576.1 oxidoreductase 1566940 3777606 LSA1589 Lactobacillus sakei subsp. sakei 23K oxidoreductase YP_396202.1 1566020 D 314315 CDS YP_396203.1 81429202 3777607 complement(1567048..1567854) 1 NC_007576.1 pyrroline-5-carboxylate reductase 1567854 proC 3777607 proC Lactobacillus sakei subsp. sakei 23K pyrroline-5-carboxylate reductase YP_396203.1 1567048 R 314315 CDS YP_396204.1 81429203 3777608 complement(1567975..1568571) 1 NC_007576.1 surface protein transpeptidase 2 (sortase 2) 1568571 srtA2 3777608 srtA2 Lactobacillus sakei subsp. sakei 23K surface protein transpeptidase 2 (sortase 2) YP_396204.1 1567975 R 314315 CDS YP_396205.1 81429204 3778374 complement(1569369..1570829) 1 NC_007576.1 di-/tripeptide:H(+) symporter 1570829 dtpT 3778374 dtpT Lactobacillus sakei subsp. sakei 23K di-/tripeptide:H(+) symporter YP_396205.1 1569369 R 314315 CDS YP_396206.1 81429205 3778375 1571243..1571827 1 NC_007576.1 nucleotide diphosphate NUDIX family hydrolase 1571827 3778375 LSA1593 Lactobacillus sakei subsp. sakei 23K nucleotide diphosphate NUDIX family hydrolase YP_396206.1 1571243 D 314315 CDS YP_396207.1 81429206 3778376 complement(1577615..1579132) 1 NC_007576.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 1579132 lysS 3778376 lysS Lactobacillus sakei subsp. sakei 23K lysyl-tRNA synthetase YP_396207.1 1577615 R 314315 CDS YP_396208.1 81429207 3778377 complement(1579208..1580194) 1 NC_007576.1 dihydrouridine synthetase 1580194 3778377 LSA1595 Lactobacillus sakei subsp. sakei 23K dihydrouridine synthetase YP_396208.1 1579208 R 314315 CDS YP_396209.1 81429208 3778378 complement(1580278..1581156) 1 NC_007576.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; heat shock protein 33 1581156 hslO 3778378 hslO Lactobacillus sakei subsp. sakei 23K heat shock protein 33 YP_396209.1 1580278 R 314315 CDS YP_396210.1 81429209 3778379 complement(1581251..1583341) 1 NC_007576.1 ATP-dependent zinc metalloendopeptidase FtsH (cell division protein FtsH) 1583341 ftsH 3778379 ftsH Lactobacillus sakei subsp. sakei 23K ATP-dependent zinc metalloendopeptidase FtsH (cell division protein FtsH) YP_396210.1 1581251 R 314315 CDS YP_396211.1 81429210 3778380 complement(1583430..1583975) 1 NC_007576.1 hypoxanthine phosphoribosyltransferase 1583975 hpt 3778380 hpt Lactobacillus sakei subsp. sakei 23K hypoxanthine phosphoribosyltransferase YP_396211.1 1583430 R 314315 CDS YP_396212.1 81429211 3778381 complement(1584015..1585394) 1 NC_007576.1 ATPase 1585394 3778381 LSA1599 Lactobacillus sakei subsp. sakei 23K ATPase YP_396212.1 1584015 R 314315 CDS YP_396213.1 81429212 3778717 complement(1585478..1585921) 1 NC_007576.1 hypothetical protein 1585921 3778717 LSA1600 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396213.1 1585478 R 314315 CDS YP_396214.1 81429213 3778718 complement(1586042..1586440) 1 NC_007576.1 hypothetical protein 1586440 3778718 LSA1601 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396214.1 1586042 R 314315 CDS YP_396215.1 81429214 3778719 complement(1586586..1586852) 1 NC_007576.1 hypothetical protein 1586852 3778719 LSA1602 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396215.1 1586586 R 314315 CDS YP_396216.1 81429215 3778720 complement(1586862..1588445) 1 NC_007576.1 drug:Na(+) antiporter (drug efflux pump) 1588445 3778720 LSA1603 Lactobacillus sakei subsp. sakei 23K drug:Na(+) antiporter (drug efflux pump) YP_396216.1 1586862 R 314315 CDS YP_396217.1 81429216 3778721 complement(1588482..1592003) 1 NC_007576.1 transcription-repair coupling factor 1592003 mfd 3778721 mfd Lactobacillus sakei subsp. sakei 23K transcription-repair coupling factor YP_396217.1 1588482 R 314315 CDS YP_396218.1 81429217 3778722 complement(1592242..1592799) 1 NC_007576.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1592799 pth 3778722 pth Lactobacillus sakei subsp. sakei 23K peptidyl-tRNA hydrolase YP_396218.1 1592242 R 314315 CDS YP_396219.1 81429218 3778723 1593030..1594007 1 NC_007576.1 L-lactate dehydrogenase 1594007 ldh 3778723 ldh Lactobacillus sakei subsp. sakei 23K L-lactate dehydrogenase YP_396219.1 1593030 D 314315 CDS YP_396220.1 81429219 3778724 complement(1594082..1594501) 1 NC_007576.1 MarR family transcriptional regulator 1594501 3778724 LSA1607 Lactobacillus sakei subsp. sakei 23K MarR family transcriptional regulator YP_396220.1 1594082 R 314315 CDS YP_396221.1 81429220 3778733 1595161..1596540 1 NC_007576.1 hypothetical protein 1596540 3778733 LSA1608 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396221.1 1595161 D 314315 CDS YP_396222.1 81429221 3778734 1596722..1597402 1 NC_007576.1 hypothetical protein 1597402 3778734 LSA1609 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396222.1 1596722 D 314315 CDS YP_396223.1 81429222 3778735 complement(1597455..1597976) 1 NC_007576.1 hypothetical protein 1597976 3778735 LSA1610 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396223.1 1597455 R 314315 CDS YP_396224.1 81429223 3778736 complement(1598123..1598479) 1 NC_007576.1 DNA-binding protein PemK family 1598479 3778736 LSA1611 Lactobacillus sakei subsp. sakei 23K DNA-binding protein PemK family YP_396224.1 1598123 R 314315 CDS YP_396225.1 81429224 3778737 complement(1598503..1598769) 1 NC_007576.1 hypothetical protein 1598769 3778737 LSA1612 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396225.1 1598503 R 314315 CDS YP_396226.1 81429225 3778738 complement(1598851..1599993) 1 NC_007576.1 alanine racemase 1599993 alr 3778738 alr Lactobacillus sakei subsp. sakei 23K alanine racemase YP_396226.1 1598851 R 314315 CDS YP_396227.1 81429226 3778739 complement(1599997..1600350) 1 NC_007576.1 holo-acyl-carrier-protein-synthase 1600350 acpS 3778739 acpS Lactobacillus sakei subsp. sakei 23K holo-acyl-carrier-protein-synthase YP_396227.1 1599997 R 314315 CDS YP_396228.1 81429227 3778740 complement(1600484..1602076) 1 NC_007576.1 ATP-dependent RNA helicase 1602076 3778740 LSA1615 Lactobacillus sakei subsp. sakei 23K ATP-dependent RNA helicase YP_396228.1 1600484 R 314315 CDS YP_396229.1 81429228 3778758 complement(1602350..1603726) 1 NC_007576.1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 1603726 murF 3778758 murF Lactobacillus sakei subsp. sakei 23K UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_396229.1 1602350 R 314315 CDS YP_396230.1 81429229 3778759 complement(1603890..1605128) 1 NC_007576.1 hypothetical protein 1605128 3778759 LSA1617 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396230.1 1603890 R 314315 CDS YP_396231.1 81429230 3778760 complement(1605249..1606148) 1 NC_007576.1 metalloprotease; heat shock protein HtpX 1606148 htpX 3778760 htpX Lactobacillus sakei subsp. sakei 23K heat shock protein HtpX YP_396231.1 1605249 R 314315 CDS YP_396232.1 81429231 3778761 complement(1606162..1606728) 1 NC_007576.1 LemA family protein 1606728 3778761 LSA1619 Lactobacillus sakei subsp. sakei 23K LemA family protein YP_396232.1 1606162 R 314315 CDS YP_396233.1 81429232 3778762 1606880..1607620 1 NC_007576.1 hypothetical protein 1607620 3778762 LSA1620 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396233.1 1606880 D 314315 CDS YP_396234.1 81429233 3778763 1607647..1608900 1 NC_007576.1 drug:H(+) antiporter 1608900 3778763 LSA1621 Lactobacillus sakei subsp. sakei 23K drug:H(+) antiporter YP_396234.1 1607647 D 314315 CDS YP_396235.1 81429234 3778764 1608956..1609081 1 NC_007576.1 hypothetical protein 1609081 3778764 LSA1622 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396235.1 1608956 D 314315 CDS YP_396236.1 81429235 3778765 complement(1609216..1609893) 1 NC_007576.1 hypothetical protein 1609893 3778765 LSA1623 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396236.1 1609216 R 314315 CDS YP_396237.1 81429236 3777878 complement(1609906..1610535) 1 NC_007576.1 hypothetical protein 1610535 3777878 LSA1624 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396237.1 1609906 R 314315 CDS YP_396238.1 81429237 3777879 1610634..1611035 1 NC_007576.1 hypothetical protein 1611035 3777879 LSA1625 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396238.1 1610634 D 314315 CDS YP_396239.1 81429238 3777880 1611028..1611852 1 NC_007576.1 hypothetical protein 1611852 3777880 LSA1626 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396239.1 1611028 D 314315 CDS YP_396240.1 81429239 3777881 complement(1611937..1612200) 1 NC_007576.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 1612200 rpmE2 3777881 rpmE2 Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L31 YP_396240.1 1611937 R 314315 CDS YP_396241.1 81429240 3777882 complement(1612355..1613614) 1 NC_007576.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1613614 murA2 3777882 murA2 Lactobacillus sakei subsp. sakei 23K UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_396241.1 1612355 R 314315 CDS YP_396242.1 81429241 3777883 complement(1613960..1615552) 1 NC_007576.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1615552 pyrG 3777883 pyrG Lactobacillus sakei subsp. sakei 23K CTP synthetase YP_396242.1 1613960 R 314315 CDS YP_396243.1 81429242 3777884 1615819..1616754 1 NC_007576.1 ROK family sugar kinase 1616754 3777884 LSA1630 Lactobacillus sakei subsp. sakei 23K ROK family sugar kinase YP_396243.1 1615819 D 314315 CDS YP_396244.1 81429243 3777885 complement(1616829..1617437) 1 NC_007576.1 participates in both the initiation and recycling phases of transcription; in the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; DNA-directed RNA polymerase subunit delta 1617437 rpoE 3777885 rpoE Lactobacillus sakei subsp. sakei 23K DNA-directed RNA polymerase subunit delta YP_396244.1 1616829 R 314315 CDS YP_396245.1 81429244 3776882 complement(1617481..1617921) 1 NC_007576.1 hypothetical protein 1617921 3776882 LSA1632 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396245.1 1617481 R 314315 CDS YP_396246.1 81429245 3776883 1618074..1618916 1 NC_007576.1 hypothetical protein 1618916 3776883 LSA1633 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396246.1 1618074 D 314315 CDS YP_396247.1 81429246 3776884 1618931..1620289 1 NC_007576.1 metal-dependent phosphohydrolase 1620289 3776884 LSA1634 Lactobacillus sakei subsp. sakei 23K metal-dependent phosphohydrolase YP_396247.1 1618931 D 314315 CDS YP_396248.1 81429247 3776885 1620305..1621126 1 NC_007576.1 HAD superfamily hydrolase 1621126 3776885 LSA1635 Lactobacillus sakei subsp. sakei 23K HAD superfamily hydrolase YP_396248.1 1620305 D 314315 CDS YP_396249.1 81429248 3776886 1621368..1622201 1 NC_007576.1 hypothetical protein 1622201 3776886 LSA1636 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396249.1 1621368 D 314315 CDS YP_396250.1 81429249 3776887 complement(1622233..1622964) 1 NC_007576.1 hypothetical protein 1622964 3776887 LSA1637 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396250.1 1622233 R 314315 CDS YP_396251.1 81429250 3776888 1623140..1623538 1 NC_007576.1 large conductance mechanosensitive channel 1623538 3776888 LSA1638 Lactobacillus sakei subsp. sakei 23K large conductance mechanosensitive channel YP_396251.1 1623140 D 314315 CDS YP_396252.1 81429251 3776889 complement(1623677..1624507) 1 NC_007576.1 transcriptional regulator 1624507 3776889 LSA1639 Lactobacillus sakei subsp. sakei 23K transcriptional regulator YP_396252.1 1623677 R 314315 CDS YP_396253.1 81429252 3778422 complement(1624703..1625620) 1 NC_007576.1 N-acetylneuraminate lyase 1625620 nanA 3778422 nanA Lactobacillus sakei subsp. sakei 23K N-acetylneuraminate lyase YP_396253.1 1624703 R 314315 CDS YP_396254.1 81429253 3778423 complement(1625640..1626335) 1 NC_007576.1 Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; N-acetylmannosamine-6-phosphate 2-epimerase 1626335 nanE 3778423 nanE Lactobacillus sakei subsp. sakei 23K N-acetylmannosamine-6-phosphate 2-epimerase YP_396254.1 1625640 R 314315 CDS YP_396255.1 81429254 3778424 complement(1626528..1628030) 1 NC_007576.1 solute:Na(+) symporter 1628030 3778424 LSA1642 Lactobacillus sakei subsp. sakei 23K solute:Na(+) symporter YP_396255.1 1626528 R 314315 CDS YP_396256.1 81429255 3778425 1628215..1629087 1 NC_007576.1 ROK family sugar kinase 1629087 3778425 LSA1643 Lactobacillus sakei subsp. sakei 23K ROK family sugar kinase YP_396256.1 1628215 D 314315 CDS YP_396257.1 81429256 3778426 1629218..1629949 1 NC_007576.1 hypothetical protein 1629949 3778426 LSA1644 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396257.1 1629218 D 314315 CDS YP_396258.1 81429257 3778427 1629951..1631117 1 NC_007576.1 Na(+)/(+) antiporter 1631117 3778427 LSA1645 Lactobacillus sakei subsp. sakei 23K Na(+)/(+) antiporter YP_396258.1 1629951 D 314315 CDS YP_396259.1 81429258 3778428 complement(1631162..1632133) 1 NC_007576.1 ribose-phosphate diphosphokinase (phosphoribosyl pyrophosphate synthetase) 1632133 prs 3778428 prs Lactobacillus sakei subsp. sakei 23K ribose-phosphate diphosphokinase (phosphoribosyl pyrophosphate synthetase) YP_396259.1 1631162 R 314315 CDS YP_396260.1 81429259 3778429 1632407..1632745 1 NC_007576.1 hypothetical protein 1632745 3778429 LSA1647 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396260.1 1632407 D 314315 CDS YP_396261.1 81429260 3778430 complement(1632935..1634323) 1 NC_007576.1 UDP-N-acetylglucosamine pyrophosphorylase / N-acetylglucosamine-1-phosphate uridyltransferase 1634323 glmU 3778430 glmU Lactobacillus sakei subsp. sakei 23K UDP-N-acetylglucosamine pyrophosphorylase / N-acetylglucosamine-1-phosphate uridyltransferase YP_396261.1 1632935 R 314315 CDS YP_396262.1 81429261 3778774 1634456..1635076 1 NC_007576.1 hypothetical protein 1635076 3778774 LSA1649 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396262.1 1634456 D 314315 CDS YP_396263.1 81429262 3778775 1635110..1635700 1 NC_007576.1 hypothetical protein 1635700 3778775 LSA1650 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396263.1 1635110 D 314315 CDS YP_396264.1 81429263 3778776 complement(1635725..1636561) 1 NC_007576.1 pur operon repressor 1636561 3778776 LSA1651 Lactobacillus sakei subsp. sakei 23K pur operon repressor YP_396264.1 1635725 R 314315 CDS YP_396265.1 81429264 3778777 complement(1636774..1637631) 1 NC_007576.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1637631 ipk 3778777 ipk Lactobacillus sakei subsp. sakei 23K 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_396265.1 1636774 R 314315 CDS YP_396266.1 81429265 3778778 complement(1637883..1638323) 1 NC_007576.1 MarR family transcriptional regulator 1638323 3778778 LSA1653 Lactobacillus sakei subsp. sakei 23K MarR family transcriptional regulator YP_396266.1 1637883 R 314315 CDS YP_396267.1 81429266 3778779 complement(1638534..1638785) 1 NC_007576.1 hypothetical protein 1638785 3778779 LSA1654 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396267.1 1638534 R 314315 CDS YP_396268.1 81429267 3778780 complement(1638869..1639762) 1 NC_007576.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1639762 ksgA 3778780 ksgA Lactobacillus sakei subsp. sakei 23K dimethyladenosine transferase YP_396268.1 1638869 R 314315 CDS YP_396269.1 81429268 3778781 complement(1639764..1640333) 1 NC_007576.1 hypothetical protein 1640333 3778781 LSA1656 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396269.1 1639764 R 314315 CDS YP_396270.1 81429269 3778431 complement(1640330..1641106) 1 NC_007576.1 TatD family deoxyribonuclease 1641106 3778431 LSA1657 Lactobacillus sakei subsp. sakei 23K TatD family deoxyribonuclease YP_396270.1 1640330 R 314315 CDS YP_396271.1 81429270 3778432 complement(1641460..1643505) 1 NC_007576.1 methionyl-tRNA synthetase 1643505 metS 3778432 metS Lactobacillus sakei subsp. sakei 23K methionyl-tRNA synthetase YP_396271.1 1641460 R 314315 CDS YP_396272.1 81429271 3778433 complement(1643635..1644480) 1 NC_007576.1 hypothetical protein 1644480 3778433 LSA1659 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396272.1 1643635 R 314315 CDS YP_396273.1 81429272 3778434 complement(1644492..1644812) 1 NC_007576.1 hypothetical protein 1644812 3778434 LSA1660 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396273.1 1644492 R 314315 CDS YP_396274.1 81429273 3778435 complement(1644816..1645310) 1 NC_007576.1 nucleotide NUDIX family hydrolase 1645310 3778435 LSA1661 Lactobacillus sakei subsp. sakei 23K nucleotide NUDIX family hydrolase YP_396274.1 1644816 R 314315 CDS YP_396275.1 81429274 3778436 complement(1645405..1645692) 1 NC_007576.1 hypothetical protein 1645692 3778436 LSA1662 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396275.1 1645405 R 314315 CDS YP_396276.1 81429275 3778437 complement(1645708..1646670) 1 NC_007576.1 hypothetical protein 1646670 3778437 LSA1663 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396276.1 1645708 R 314315 CDS YP_396277.1 81429276 3778438 1646805..1647344 1 NC_007576.1 dihydrofolate reductase 1647344 3778438 LSA1664 Lactobacillus sakei subsp. sakei 23K dihydrofolate reductase YP_396277.1 1646805 D 314315 CDS YP_396278.1 81429277 3778138 1647709..1648506 1 NC_007576.1 catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate; phosphonoacetaldehyde hydrolase 1648506 phnX 3778138 phnX Lactobacillus sakei subsp. sakei 23K phosphonoacetaldehyde hydrolase YP_396278.1 1647709 D 314315 CDS YP_396279.1 81429278 3778139 complement(1648874..1649242) 1 NC_007576.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 1649242 rplL 3778139 rplL Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L7/L12 YP_396279.1 1648874 R 314315 CDS YP_396280.1 81429279 3778140 complement(1649306..1649809) 1 NC_007576.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 1649809 rplJ 3778140 rplJ Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L10 YP_396280.1 1649306 R 314315 CDS YP_396281.1 81429280 3778141 1650125..1651309 1 NC_007576.1 acetate kinase 1651309 ack3 3778141 ack3 Lactobacillus sakei subsp. sakei 23K acetate kinase YP_396281.1 1650125 D 314315 CDS YP_396282.1 81429281 3778142 1651503..1652861 1 NC_007576.1 adenine transport protein 1652861 3778142 LSA1669 Lactobacillus sakei subsp. sakei 23K adenine transport protein YP_396282.1 1651503 D 314315 CDS YP_396283.1 81429282 3778143 1652877..1654619 1 NC_007576.1 adenine deaminase 1654619 adeC2 3778143 adeC2 Lactobacillus sakei subsp. sakei 23K adenine deaminase YP_396283.1 1652877 D 314315 CDS YP_396284.1 81429283 3778144 complement(1654677..1655366) 1 NC_007576.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 1655366 rplA 3778144 rplA Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L1 YP_396284.1 1654677 R 314315 CDS YP_396285.1 81429284 3778145 complement(1655465..1655890) 1 NC_007576.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 1655890 rplK 3778145 rplK Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L11 YP_396285.1 1655465 R 314315 CDS YP_396286.1 81429285 3776842 complement(1656016..1656873) 1 NC_007576.1 lipase/esterase 1656873 3776842 LSA1673 Lactobacillus sakei subsp. sakei 23K lipase/esterase YP_396286.1 1656016 R 314315 CDS YP_396287.1 81429286 3776843 complement(1657216..1657764) 1 NC_007576.1 transcription antitermination protein NusG 1657764 nusG 3776843 nusG Lactobacillus sakei subsp. sakei 23K transcription antitermination protein NusG YP_396287.1 1657216 R 314315 CDS YP_396288.1 81429287 3776844 complement(1657862..1658041) 1 NC_007576.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 1658041 secE 3776844 secE Lactobacillus sakei subsp. sakei 23K preprotein translocase subunit SecE YP_396288.1 1657862 R 314315 CDS YP_396289.1 81429288 3776845 complement(1658051..1658200) 1 NC_007576.1 50S ribosomal protein L33 1658200 rpmG2 3776845 rpmG2 Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L33 YP_396289.1 1658051 R 314315 CDS YP_396290.1 81429289 3776846 complement(1658326..1658886) 1 NC_007576.1 DNA-directed RNA polymerase sigma factor 1658886 3776846 LSA1677 Lactobacillus sakei subsp. sakei 23K DNA-directed RNA polymerase sigma factor YP_396290.1 1658326 R 314315 CDS YP_396291.1 81429290 3776847 complement(1658964..1659497) 1 NC_007576.1 hypothetical protein 1659497 3776847 LSA1678 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396291.1 1658964 R 314315 CDS YP_396292.1 81429291 3776848 complement(1659501..1660388) 1 NC_007576.1 tRNA/rRNA methyltransferase 1660388 3776848 LSA1679 Lactobacillus sakei subsp. sakei 23K tRNA/rRNA methyltransferase YP_396292.1 1659501 R 314315 CDS YP_396293.1 81429292 3776849 complement(1660375..1660794) 1 NC_007576.1 hypothetical protein 1660794 3776849 LSA1680 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396293.1 1660375 R 314315 CDS YP_396294.1 81429293 3777707 complement(1660779..1662185) 1 NC_007576.1 cysteinyl-tRNA synthetase 1662185 cysS 3777707 cysS Lactobacillus sakei subsp. sakei 23K cysteinyl-tRNA synthetase YP_396294.1 1660779 R 314315 CDS YP_396295.1 81429294 3777708 complement(1662976..1664088) 1 NC_007576.1 hypothetical protein 1664088 3777708 LSA1682 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396295.1 1662976 R 314315 CDS YP_396296.1 81429295 3777709 complement(1664119..1665483) 1 NC_007576.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 1665483 3777709 LSA1683 Lactobacillus sakei subsp. sakei 23K DNA repair protein RadA YP_396296.1 1664119 R 314315 CDS YP_396297.1 81429296 3777710 complement(1665556..1666095) 1 NC_007576.1 deoxyuridine 5'-triphosphatase 1666095 dut 3777710 dut Lactobacillus sakei subsp. sakei 23K deoxyuridine 5'-triphosphatase YP_396297.1 1665556 R 314315 CDS YP_396298.1 81429297 3777711 1666291..1666974 1 NC_007576.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1666974 rpiA 3777711 rpiA Lactobacillus sakei subsp. sakei 23K ribose-5-phosphate isomerase A YP_396298.1 1666291 D 314315 CDS YP_396299.1 81429298 3777712 1667449..1668657 1 NC_007576.1 cysteine aminopeptidase 1668657 pepC1N 3777712 pepC1N Lactobacillus sakei subsp. sakei 23K cysteine aminopeptidase YP_396299.1 1667449 D 314315 CDS YP_396300.1 81429299 3777713 1668679..1668771 1 NC_007576.1 cysteine aminopeptidase 1668771 pepC1C 3777713 pepC1C Lactobacillus sakei subsp. sakei 23K cysteine aminopeptidase YP_396300.1 1668679 D 314315 CDS YP_396301.1 81429300 3777714 1668975..1670321 1 NC_007576.1 cysteine aminopeptidase 1670321 pepC2 3777714 pepC2 Lactobacillus sakei subsp. sakei 23K cysteine aminopeptidase YP_396301.1 1668975 D 314315 CDS YP_396302.1 81429301 3777137 complement(1670370..1671692) 1 NC_007576.1 M20 family peptidase 1671692 3777137 LSA1689 Lactobacillus sakei subsp. sakei 23K M20 family peptidase YP_396302.1 1670370 R 314315 CDS YP_396303.1 81429302 3777138 complement(1671714..1673030) 1 NC_007576.1 PTS system cellobiose transporter subunit IIC 1673030 3777138 LSA1690 Lactobacillus sakei subsp. sakei 23K PTS system cellobiose transporter subunit IIC YP_396303.1 1671714 R 314315 CDS YP_396304.1 81429303 3777139 complement(1673046..1673573) 1 NC_007576.1 hypothetical protein 1673573 3777139 LSA1691 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396304.1 1673046 R 314315 CDS YP_396305.1 81429304 3777140 complement(1673586..1674302) 1 NC_007576.1 GntR family transcriptional regulator 1674302 3777140 LSA1692 Lactobacillus sakei subsp. sakei 23K GntR family transcriptional regulator YP_396305.1 1673586 R 314315 CDS YP_396306.1 81429305 3777141 complement(1674319..1675272) 1 NC_007576.1 L-asparaginase 1675272 asnA2 3777141 asnA2 Lactobacillus sakei subsp. sakei 23K L-asparaginase YP_396306.1 1674319 R 314315 CDS YP_396307.1 81429306 3777142 complement(1675443..1676348) 1 NC_007576.1 glycine/betaine/carnitine ABC transporter substrate binding lipoprotein 1676348 3777142 LSA1694 Lactobacillus sakei subsp. sakei 23K glycine/betaine/carnitine ABC transporter substrate binding lipoprotein YP_396307.1 1675443 R 314315 CDS YP_396308.1 81429307 3777143 complement(1676360..1677202) 1 NC_007576.1 glycine/betaine/carnitine ABC transporter permease 1677202 3777143 LSA1695 Lactobacillus sakei subsp. sakei 23K glycine/betaine/carnitine ABC transporter permease YP_396308.1 1676360 R 314315 CDS YP_396309.1 81429308 3777144 complement(1677207..1678406) 1 NC_007576.1 glycine/betaine/carnitine ABC transporter ATP-binding subunit 1678406 3777144 LSA1696 Lactobacillus sakei subsp. sakei 23K glycine/betaine/carnitine ABC transporter ATP-binding subunit YP_396309.1 1677207 R 314315 CDS YP_396310.1 81429309 3777386 complement(1678738..1680222) 1 NC_007576.1 amino-acid/polyamine transport protein 1680222 3777386 LSA1697 Lactobacillus sakei subsp. sakei 23K amino-acid/polyamine transport protein YP_396310.1 1678738 R 314315 CDS YP_396311.1 81429310 3777387 complement(1680437..1681138) 1 NC_007576.1 hypothetical protein 1681138 3777387 LSA1698 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396311.1 1680437 R 314315 CDS YP_396312.1 81429311 3777388 complement(1681251..1682627) 1 NC_007576.1 manganese transport protein MntH 1682627 mntH2 3777388 mntH2 Lactobacillus sakei subsp. sakei 23K manganese transport protein MntH YP_396312.1 1681251 R 314315 CDS YP_396313.1 81429312 3777389 complement(1682910..1683128) 1 NC_007576.1 hypothetical protein 1683128 3777389 LSA1700 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396313.1 1682910 R 314315 CDS YP_396314.1 81429313 3777390 complement(1683243..1683779) 1 NC_007576.1 p-coumaric acid decarboxylase 1683779 pdcA 3777390 pdcA Lactobacillus sakei subsp. sakei 23K p-coumaric acid decarboxylase YP_396314.1 1683243 R 314315 CDS YP_396315.1 81429314 3777391 complement(1683922..1684836) 1 NC_007576.1 similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs; alcohol dehydrogenase 1684836 3777391 LSA1702 Lactobacillus sakei subsp. sakei 23K alcohol dehydrogenase YP_396315.1 1683922 R 314315 CDS YP_396316.1 81429315 3777392 complement(1684934..1686094) 1 NC_007576.1 Na(+)/H(+) antiporter 1686094 3777392 LSA1703 Lactobacillus sakei subsp. sakei 23K Na(+)/H(+) antiporter YP_396316.1 1684934 R 314315 CDS YP_396317.1 81429316 3777393 1686447..1689107 1 NC_007576.1 calcium-transporting P-type ATPase 1689107 3777393 LSA1704 Lactobacillus sakei subsp. sakei 23K calcium-transporting P-type ATPase YP_396317.1 1686447 D 314315 CDS YP_396318.1 81429317 3777394 complement(1689164..1690165) 1 NC_007576.1 hypothetical protein 1690165 3777394 LSA1705 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396318.1 1689164 R 314315 CDS YP_396319.1 81429318 3776900 complement(1690589..1691572) 1 NC_007576.1 beta-lactamase (class A) 1691572 3776900 LSA1706 Lactobacillus sakei subsp. sakei 23K beta-lactamase (class A) YP_396319.1 1690589 R 314315 CDS YP_396320.1 81429319 3776901 complement(1691588..1692406) 1 NC_007576.1 hypothetical protein 1692406 3776901 LSA1707 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396320.1 1691588 R 314315 CDS YP_396321.1 81429320 3776902 complement(1692480..1693091) 1 NC_007576.1 hypothetical protein 1693091 3776902 LSA1708 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396321.1 1692480 R 314315 CDS YP_396322.1 81429321 3776903 complement(1693140..1694180) 1 NC_007576.1 hypothetical protein 1694180 3776903 LSA1709 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396322.1 1693140 R 314315 CDS YP_396323.1 81429322 3776904 complement(1694341..1695297) 1 NC_007576.1 beta-galactosidase, small subunit 1695297 lacM 3776904 lacM Lactobacillus sakei subsp. sakei 23K beta-galactosidase, small subunit YP_396323.1 1694341 R 314315 CDS YP_396324.1 81429323 3776905 complement(1695281..1697158) 1 NC_007576.1 beta-galactosidase, large subunit 1697158 lacL 3776905 lacL Lactobacillus sakei subsp. sakei 23K beta-galactosidase, large subunit YP_396324.1 1695281 R 314315 CDS YP_396325.1 81429324 3776906 complement(1697625..1698362) 1 NC_007576.1 nitroreductase (oxidoreductase) 1698362 3776906 LSA1712 Lactobacillus sakei subsp. sakei 23K nitroreductase (oxidoreductase) YP_396325.1 1697625 R 314315 CDS YP_396326.1 81429325 3776907 complement(1698444..1698551) 1 NC_007576.1 hypothetical protein 1698551 3776907 LSA1713 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396326.1 1698444 R 314315 CDS YP_396327.1 81429326 3776973 complement(1698676..1698819) 1 NC_007576.1 hypothetical protein 1698819 3776973 LSA1714 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396327.1 1698676 R 314315 CDS YP_396328.1 81429327 3776974 complement(1698883..1699563) 1 NC_007576.1 hypothetical protein 1699563 3776974 LSA1715 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396328.1 1698883 R 314315 CDS YP_396329.1 81429328 3776975 complement(1699638..1700273) 1 NC_007576.1 hypothetical protein 1700273 3776975 LSA1716 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396329.1 1699638 R 314315 CDS YP_396330.1 81429329 3776976 complement(1700435..1700755) 1 NC_007576.1 XRE family transcriptional regulator 1700755 3776976 LSA1717 Lactobacillus sakei subsp. sakei 23K XRE family transcriptional regulator YP_396330.1 1700435 R 314315 CDS YP_396331.1 81429330 3776977 1701151..1701789 1 NC_007576.1 lipoprotein precursor 1701789 3776977 LSA1718 Lactobacillus sakei subsp. sakei 23K lipoprotein precursor YP_396331.1 1701151 D 314315 CDS YP_396332.1 81429331 3776978 complement(1701851..1702429) 1 NC_007576.1 hypothetical protein 1702429 3776978 LSA1719 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396332.1 1701851 R 314315 CDS YP_396333.1 81429332 3776979 complement(1702456..1704825) 1 NC_007576.1 hypothetical protein 1704825 3776979 LSA1720_a Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396333.1 1702456 R 314315 CDS YP_396334.1 81429333 3776980 complement(1704825..1705043) 1 NC_007576.1 hypothetical protein 1705043 3776980 LSA1720_b Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396334.1 1704825 R 314315 CDS YP_396335.1 81429334 3777304 complement(1705186..1705578) 1 NC_007576.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1705578 rpsI 3777304 rpsI Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S9 YP_396335.1 1705186 R 314315 CDS YP_396336.1 81429335 3777305 complement(1705592..1706035) 1 NC_007576.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1706035 rplM 3777305 rplM Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L13 YP_396336.1 1705592 R 314315 CDS YP_396337.1 81429336 3777306 complement(1706170..1706919) 1 NC_007576.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1706919 truA 3777306 truA Lactobacillus sakei subsp. sakei 23K tRNA pseudouridine synthase A YP_396337.1 1706170 R 314315 CDS YP_396338.1 81429337 3777307 complement(1707070..1707417) 1 NC_007576.1 MarR family transcriptional regulator 1707417 3777307 LSA1724 Lactobacillus sakei subsp. sakei 23K MarR family transcriptional regulator YP_396338.1 1707070 R 314315 CDS YP_396339.1 81429338 3777308 complement(1707594..1708571) 1 NC_007576.1 cell surface protein 1708571 3777308 LSA1725 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_396339.1 1707594 R 314315 CDS YP_396340.1 81429339 3777309 complement(1708705..1708857) 1 NC_007576.1 hypothetical protein 1708857 3777309 LSA1726 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396340.1 1708705 R 314315 CDS YP_396341.1 81429340 3777310 complement(1708838..1709086) 1 NC_007576.1 hypothetical protein 1709086 3777310 LSA1727 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396341.1 1708838 R 314315 CDS YP_396342.1 81429341 3777311 complement(1709086..1709874) 1 NC_007576.1 cell surface protein 1709874 3777311 LSA1728 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_396342.1 1709086 R 314315 CDS YP_396343.1 81429342 3778766 complement(1709909..1710892) 1 NC_007576.1 cell surface protein 1710892 3778766 LSA1729 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_396343.1 1709909 R 314315 CDS YP_396344.1 81429343 3778767 complement(1710960..1712837) 1 NC_007576.1 cell surface protein 1712837 3778767 LSA1730 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_396344.1 1710960 R 314315 CDS YP_396345.1 81429344 3778768 complement(1712824..1718130) 1 NC_007576.1 cell surface protein 1718130 3778768 LSA1731 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_396345.1 1712824 R 314315 CDS YP_396346.1 81429345 3778769 complement(1718762..1719052) 1 NC_007576.1 hypothetical protein 1719052 3778769 LSA1732 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396346.1 1718762 R 314315 CDS YP_396347.1 81429346 3778770 complement(1719109..1719177) 1 NC_007576.1 hypothetical protein 1719177 3778770 LSA1733 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396347.1 1719109 R 314315 CDS YP_396348.1 81429347 3778771 complement(1719194..1720033) 1 NC_007576.1 hypothetical protein 1720033 3778771 LSA1734 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396348.1 1719194 R 314315 CDS YP_396349.1 81429348 3778772 complement(1720440..1721231) 1 NC_007576.1 cobalt ABC transporter transmembrane protein 1721231 3778772 LSA1735 Lactobacillus sakei subsp. sakei 23K cobalt ABC transporter transmembrane protein YP_396349.1 1720440 R 314315 CDS YP_396350.1 81429349 3778773 complement(1721224..1722099) 1 NC_007576.1 with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene; cobalt transporter ATP-binding subunit 1722099 cbiO 3778773 cbiO Lactobacillus sakei subsp. sakei 23K cobalt transporter ATP-binding subunit YP_396350.1 1721224 R 314315 CDS YP_396351.1 81429350 3777657 complement(1722075..1722917) 1 NC_007576.1 with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene; cobalt transporter ATP-binding subunit 1722917 cbiO 3777657 cbiO Lactobacillus sakei subsp. sakei 23K cobalt transporter ATP-binding subunit YP_396351.1 1722075 R 314315 CDS YP_396352.1 81429351 3777658 complement(1723593..1723973) 1 NC_007576.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1723973 rplQ 3777658 rplQ Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L17 YP_396352.1 1723593 R 314315 CDS YP_396353.1 81429352 3777659 complement(1724000..1724938) 1 NC_007576.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1724938 rpoA 3777659 rpoA Lactobacillus sakei subsp. sakei 23K DNA-directed RNA polymerase subunit alpha YP_396353.1 1724000 R 314315 CDS YP_396354.1 81429353 3777660 complement(1725022..1725414) 1 NC_007576.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1725414 rpsK 3777660 rpsK Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S11 YP_396354.1 1725022 R 314315 CDS YP_396355.1 81429354 3777661 complement(1725438..1725803) 1 NC_007576.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1725803 rpsM 3777661 rpsM Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S13 YP_396355.1 1725438 R 314315 CDS YP_396356.1 81429355 3777662 complement(1725826..1725942) 1 NC_007576.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 1725942 rpmJ 3777662 rpmJ Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L36 YP_396356.1 1725826 R 314315 CDS YP_396357.1 81429356 3777663 complement(1725975..1726193) 1 NC_007576.1 translation initiation factor IF-1 1726193 infA 3777663 infA Lactobacillus sakei subsp. sakei 23K translation initiation factor IF-1 YP_396357.1 1725975 R 314315 CDS YP_396358.1 81429357 3777664 complement(1726385..1727041) 1 NC_007576.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1727041 adk 3777664 adk Lactobacillus sakei subsp. sakei 23K adenylate kinase YP_396358.1 1726385 R 314315 CDS YP_396359.2 162012653 3777525 complement(1727095..1728390) 1 NC_007576.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1728390 secY 3777525 secY Lactobacillus sakei subsp. sakei 23K preprotein translocase subunit SecY YP_396359.2 1727095 R 314315 CDS YP_396360.1 81429359 3777526 complement(1728391..1728825) 1 NC_007576.1 50S ribosomal protein L15 1728825 rplO 3777526 rplO Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L15 YP_396360.1 1728391 R 314315 CDS YP_396361.1 81429360 3777527 complement(1728860..1729045) 1 NC_007576.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 1729045 rpmD 3777527 rpmD Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L30 YP_396361.1 1728860 R 314315 CDS YP_396362.1 81429361 3777528 complement(1729060..1729560) 1 NC_007576.1 30S ribosomal protein S5 1729560 rpsE 3777528 rpsE Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S5 YP_396362.1 1729060 R 314315 CDS YP_396363.1 81429362 3777529 complement(1729579..1729938) 1 NC_007576.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1729938 rplR 3777529 rplR Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L18 YP_396363.1 1729579 R 314315 CDS YP_396364.1 81429363 3777530 complement(1729979..1730512) 1 NC_007576.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1730512 rplF 3777530 rplF Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L6 YP_396364.1 1729979 R 314315 CDS YP_396365.1 81429364 3777531 complement(1730543..1730941) 1 NC_007576.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1730941 rpsH 3777531 rpsH Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S8 YP_396365.1 1730543 R 314315 CDS YP_396366.1 81429365 3777532 complement(1731176..1731718) 1 NC_007576.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1731718 rplE 3777532 rplE Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L5 YP_396366.1 1731176 R 314315 CDS YP_396367.1 81429366 3776890 complement(1731747..1732058) 1 NC_007576.1 50S ribosomal protein L24 1732058 rplX 3776890 rplX Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L24 YP_396367.1 1731747 R 314315 CDS YP_396368.1 81429367 3776891 complement(1732089..1732457) 1 NC_007576.1 50S ribosomal protein L14 1732457 rplN 3776891 rplN Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L14 YP_396368.1 1732089 R 314315 CDS YP_396369.1 81429368 3776892 complement(1732500..1732769) 1 NC_007576.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 1732769 rpsQ 3776892 rpsQ Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S17 YP_396369.1 1732500 R 314315 CDS YP_396370.1 81429369 3776893 complement(1732793..1732987) 1 NC_007576.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 1732987 rpmC 3776893 rpmC Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L29 YP_396370.1 1732793 R 314315 CDS YP_396371.1 81429370 3776894 complement(1732977..1733411) 1 NC_007576.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1733411 rplP 3776894 rplP Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L16 YP_396371.1 1732977 R 314315 CDS YP_396372.1 81429371 3776895 complement(1733414..1734073) 1 NC_007576.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 1734073 rpsC 3776895 rpsC Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S3 YP_396372.1 1733414 R 314315 CDS YP_396373.1 81429372 3776896 complement(1734087..1734440) 1 NC_007576.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1734440 rplV 3776896 rplV Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L22 YP_396373.1 1734087 R 314315 CDS YP_396374.1 81429373 3776897 complement(1734459..1734740) 1 NC_007576.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1734740 rpsS 3776897 rpsS Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S19 YP_396374.1 1734459 R 314315 CDS YP_396375.1 81429374 3776898 complement(1734825..1735658) 1 NC_007576.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1735658 rplB 3776898 rplB Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L2 YP_396375.1 1734825 R 314315 CDS YP_396376.1 81429375 3778299 complement(1735697..1735981) 1 NC_007576.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1735981 rplW 3778299 rplW Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L23 YP_396376.1 1735697 R 314315 CDS YP_396377.1 81429376 3778300 complement(1735981..1736604) 1 NC_007576.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1736604 rplD 3778300 rplD Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L4 YP_396377.1 1735981 R 314315 CDS YP_396378.1 81429377 3778301 complement(1736628..1737260) 1 NC_007576.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1737260 rplC 3778301 rplC Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L3 YP_396378.1 1736628 R 314315 CDS YP_396379.1 81429378 3778302 complement(1737304..1737612) 1 NC_007576.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1737612 rpsJ 3778302 rpsJ Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S10 YP_396379.1 1737304 R 314315 CDS YP_396380.1 81429379 3778303 1737948..1738499 1 NC_007576.1 hydrolase isocharismatase/nicotinamidase 1738499 3778303 LSA1766 Lactobacillus sakei subsp. sakei 23K hydrolase isocharismatase/nicotinamidase YP_396380.1 1737948 D 314315 CDS YP_396381.1 81429380 3778304 complement(1739070..1741157) 1 NC_007576.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1741157 fusA 3778304 fusA Lactobacillus sakei subsp. sakei 23K elongation factor G YP_396381.1 1739070 R 314315 CDS YP_396382.1 81429381 3778305 complement(1741253..1741723) 1 NC_007576.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 1741723 rpsG 3778305 rpsG Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S7 YP_396382.1 1741253 R 314315 CDS YP_396383.1 81429382 3778306 complement(1741813..1742226) 1 NC_007576.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 1742226 rpsL 3778306 rpsL Lactobacillus sakei subsp. sakei 23K 30S ribosomal protein S12 YP_396383.1 1741813 R 314315 CDS YP_396384.1 81429383 3777042 1742507..1743196 1 NC_007576.1 type IV leader peptidase ( type II secretion system) 1743196 3777042 LSA1771 Lactobacillus sakei subsp. sakei 23K type IV leader peptidase ( type II secretion system) YP_396384.1 1742507 D 314315 CDS YP_396385.1 81429384 3777043 complement(1743200..1743484) 1 NC_007576.1 isochorismatase/nicotamidase hydrolase (C-terminal fragment), authentic frameshift 1743484 3777043 LSA1772 Lactobacillus sakei subsp. sakei 23K isochorismatase/nicotamidase hydrolase (C-terminal fragment), authentic frameshift YP_396385.1 1743200 R 314315 CDS YP_396386.1 81429385 3777044 complement(1743414..1743773) 1 NC_007576.1 hypothetical protein 1743773 3777044 LSA1773 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396386.1 1743414 R 314315 CDS YP_396387.1 81429386 3777045 complement(1743947..1747591) 1 NC_007576.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 1747591 rpoC 3777045 rpoC Lactobacillus sakei subsp. sakei 23K DNA-directed RNA polymerase subunit beta' YP_396387.1 1743947 R 314315 CDS YP_396388.1 81429387 3777046 complement(1747662..1751255) 1 NC_007576.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 1751255 rpoB 3777046 rpoB Lactobacillus sakei subsp. sakei 23K DNA-directed RNA polymerase subunit beta YP_396388.1 1747662 R 314315 CDS YP_396389.1 81429388 3777047 complement(1751514..1751846) 1 NC_007576.1 4-carboxymuconolactone decarboxylase 1751846 3777047 LSA1776 Lactobacillus sakei subsp. sakei 23K 4-carboxymuconolactone decarboxylase YP_396389.1 1751514 R 314315 CDS YP_396390.1 81429389 3777048 1752029..1752913 1 NC_007576.1 phosphate ABC transporter substrate-binding protein 1752913 3777048 LSA1777 Lactobacillus sakei subsp. sakei 23K phosphate ABC transporter substrate-binding protein YP_396390.1 1752029 D 314315 CDS YP_396391.1 81429390 3777049 1753051..1754976 1 NC_007576.1 fructose-1,6-bisphosphatase 1754976 fbp 3777049 fbp Lactobacillus sakei subsp. sakei 23K fructose-1,6-bisphosphatase YP_396391.1 1753051 D 314315 CDS YP_396392.1 81429391 3778082 complement(1755046..1757514) 1 NC_007576.1 ATPase/chaperone ClpC, specificity factor for ClpP protease 1757514 clpC 3778082 clpC Lactobacillus sakei subsp. sakei 23K ATPase/chaperone ClpC, specificity factor for ClpP protease YP_396392.1 1755046 R 314315 CDS YP_396393.1 81429392 3778083 complement(1757532..1758002) 1 NC_007576.1 stress response transcriptional regulator CtsR 1758002 ctsR 3778083 ctsR Lactobacillus sakei subsp. sakei 23K stress response transcriptional regulator CtsR YP_396393.1 1757532 R 314315 CDS YP_396394.1 81429393 3778084 complement(1764749..1765417) 1 NC_007576.1 Flp/Fnr family transcriptional regulator 1765417 3778084 LSA1781 Lactobacillus sakei subsp. sakei 23K Flp/Fnr family transcriptional regulator YP_396394.1 1764749 R 314315 CDS YP_396395.1 81429394 3778085 complement(1765436..1765984) 1 NC_007576.1 ferritin 1765984 3778085 LSA1782 Lactobacillus sakei subsp. sakei 23K ferritin YP_396395.1 1765436 R 314315 CDS YP_396396.1 81429395 3778086 complement(1765996..1766217) 1 NC_007576.1 heavy metal-chaperone/transport protein 1766217 3778086 LSA1783 Lactobacillus sakei subsp. sakei 23K heavy metal-chaperone/transport protein YP_396396.1 1765996 R 314315 CDS YP_396397.1 81429396 3778087 complement(1766296..1768158) 1 NC_007576.1 heavy metal-transporting P-type ATPase 1768158 3778087 LSA1784 Lactobacillus sakei subsp. sakei 23K heavy metal-transporting P-type ATPase YP_396397.1 1766296 R 314315 CDS YP_396398.1 81429397 3778088 1768468..1769259 1 NC_007576.1 hypothetical protein 1769259 3778088 LSA1785 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396398.1 1768468 D 314315 CDS YP_396399.1 81429398 3778089 1769205..1770449 1 NC_007576.1 melibiose:Na(+) transport protein 1770449 3778089 LSA1786 Lactobacillus sakei subsp. sakei 23K melibiose:Na(+) transport protein YP_396399.1 1769205 D 314315 CDS YP_396400.1 81429399 3778652 complement(1770502..1772160) 1 NC_007576.1 cell surface protein 1772160 3778652 LSA1787 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_396400.1 1770502 R 314315 CDS YP_396401.1 81429400 3778653 complement(1772421..1773179) 1 NC_007576.1 phage-related 1,4-beta-N-acetyl muramidase (cell wall hydrolase) 1773179 3778653 LSA1788 Lactobacillus sakei subsp. sakei 23K phage-related 1,4-beta-N-acetyl muramidase (cell wall hydrolase) YP_396401.1 1772421 R 314315 CDS YP_396402.1 81429401 3778654 complement(1773482..1774474) 1 NC_007576.1 transcriptional regulator 1774474 3778654 LSA1789 Lactobacillus sakei subsp. sakei 23K transcriptional regulator YP_396402.1 1773482 R 314315 CDS YP_396403.1 81429402 3778655 complement(1774665..1775567) 1 NC_007576.1 fructokinase 1775567 scrK 3778655 scrK Lactobacillus sakei subsp. sakei 23K fructokinase YP_396403.1 1774665 R 314315 CDS YP_396404.1 81429403 3778656 complement(1775554..1777200) 1 NC_007576.1 glucan 1,6-alpha-glucosidase 1777200 dexB 3778656 dexB Lactobacillus sakei subsp. sakei 23K glucan 1,6-alpha-glucosidase YP_396404.1 1775554 R 314315 CDS YP_396405.1 81429404 3778657 complement(1777212..1779152) 1 NC_007576.1 sucrose-specific phosphotransferase system, enzyme IIBCA 1779152 scrA 3778657 scrA Lactobacillus sakei subsp. sakei 23K sucrose-specific phosphotransferase system, enzyme IIBCA YP_396405.1 1777212 R 314315 CDS YP_396406.1 81429405 3778658 1779379..1780854 1 NC_007576.1 Sucrase-6-phosphate hydrolase (Sucrase, invertase) 1780854 scrB 3778658 scrB Lactobacillus sakei subsp. sakei 23K Sucrase-6-phosphate hydrolase (Sucrase, invertase) YP_396406.1 1779379 D 314315 CDS YP_396407.1 81429406 3778659 1780882..1781862 1 NC_007576.1 LacI family sucrose operon repressor 1781862 scrR 3778659 scrR Lactobacillus sakei subsp. sakei 23K LacI family sucrose operon repressor YP_396407.1 1780882 D 314315 CDS YP_396408.1 81429407 3778636 complement(1781915..1784089) 1 NC_007576.1 alpha-galactosidase 1784089 melA 3778636 melA Lactobacillus sakei subsp. sakei 23K alpha-galactosidase YP_396408.1 1781915 R 314315 CDS YP_396409.1 81429408 3778637 1784181..1785044 1 NC_007576.1 AraC family transcriptional regulator 1785044 3778637 LSA1796 Lactobacillus sakei subsp. sakei 23K AraC family transcriptional regulator YP_396409.1 1784181 D 314315 CDS YP_396410.1 81429409 3778638 complement(1785069..1785515) 1 NC_007576.1 MerR family transcriptional regulator 1785515 3778638 LSA1797 Lactobacillus sakei subsp. sakei 23K MerR family transcriptional regulator YP_396410.1 1785069 R 314315 CDS YP_396411.1 81429410 3778639 1785594..1786325 1 NC_007576.1 oxidoreductase 1786325 3778639 LSA1798 Lactobacillus sakei subsp. sakei 23K oxidoreductase YP_396411.1 1785594 D 314315 CDS YP_396412.1 81429411 3778640 1786492..1787211 1 NC_007576.1 GntR family transcriptional regulator 1787211 3778640 LSA1799 Lactobacillus sakei subsp. sakei 23K GntR family transcriptional regulator YP_396412.1 1786492 D 314315 CDS YP_396413.1 81429412 3778641 complement(1787269..1790439) 1 NC_007576.1 autotransport protein 1790439 3778641 LSA1800 Lactobacillus sakei subsp. sakei 23K autotransport protein YP_396413.1 1787269 R 314315 CDS YP_396414.1 81429413 3778642 complement(1790636..1791370) 1 NC_007576.1 drug ABC exporter, membrane-spanning subunit 1791370 3778642 LSA1801 Lactobacillus sakei subsp. sakei 23K drug ABC exporter, membrane-spanning subunit YP_396414.1 1790636 R 314315 CDS YP_396415.1 81429414 3778643 complement(1791383..1792252) 1 NC_007576.1 drug ABC exporter, ATP-binding subunit 1792252 3778643 LSA1802 Lactobacillus sakei subsp. sakei 23K drug ABC exporter, ATP-binding subunit YP_396415.1 1791383 R 314315 CDS YP_396416.1 81429415 3778612 complement(1792494..1793768) 1 NC_007576.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 1793768 serS 3778612 serS Lactobacillus sakei subsp. sakei 23K seryl-tRNA synthetase YP_396416.1 1792494 R 314315 CDS YP_396417.1 81429416 3778613 complement(1794061..1795644) 1 NC_007576.1 hypothetical protein 1795644 3778613 LSA1804 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396417.1 1794061 R 314315 CDS YP_396418.1 81429417 3778614 1795853..1796515 1 NC_007576.1 deoxyguanosine kinase 1796515 dgk 3778614 dgk Lactobacillus sakei subsp. sakei 23K deoxyguanosine kinase YP_396418.1 1795853 D 314315 CDS YP_396419.1 81429418 3778615 complement(1796583..1798175) 1 NC_007576.1 hypothetical protein 1798175 3778615 LSA1806 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396419.1 1796583 R 314315 CDS YP_396420.1 81429419 3778616 complement(1798489..1799340) 1 NC_007576.1 hypothetical protein 1799340 3778616 LSA1807 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396420.1 1798489 R 314315 CDS YP_396421.1 81429420 3778617 complement(1799415..1799636) 1 NC_007576.1 hypothetical protein 1799636 3778617 LSA1808 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396421.1 1799415 R 314315 CDS YP_396422.1 81429421 3778618 complement(1799709..1801097) 1 NC_007576.1 hypothetical protein 1801097 3778618 LSA1809 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396422.1 1799709 R 314315 CDS YP_396423.1 81429422 3778619 complement(1801153..1802160) 1 NC_007576.1 cell surface protein 1802160 3778619 LSA1810 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_396423.1 1801153 R 314315 CDS YP_396424.1 81429423 3778504 complement(1802276..1802998) 1 NC_007576.1 cell surface protein 1802998 3778504 LSA1811 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_396424.1 1802276 R 314315 CDS YP_396425.1 81429424 3778505 1803704..1805110 1 NC_007576.1 surface polysaccharide deacetylase 1805110 3778505 LSA1812 Lactobacillus sakei subsp. sakei 23K surface polysaccharide deacetylase YP_396425.1 1803704 D 314315 CDS YP_396426.1 81429425 3778506 complement(1805151..1805834) 1 NC_007576.1 hypothetical protein 1805834 3778506 LSA1813 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396426.1 1805151 R 314315 CDS YP_396427.1 81429426 3778507 complement(1805937..1806659) 1 NC_007576.1 hypothetical protein 1806659 3778507 LSA1814 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396427.1 1805937 R 314315 CDS YP_396428.1 81429427 3778508 1806703..1807200 1 NC_007576.1 cell surface protein 1807200 3778508 LSA1815 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_396428.1 1806703 D 314315 CDS YP_396429.1 81429428 3778509 1807278..1808291 1 NC_007576.1 cell surface protein 1808291 3778509 LSA1816 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_396429.1 1807278 D 314315 CDS YP_396430.1 81429429 3778510 complement(1808338..1809768) 1 NC_007576.1 lysine:H(+) symporter 1809768 lysP 3778510 lysP Lactobacillus sakei subsp. sakei 23K lysine:H(+) symporter YP_396430.1 1808338 R 314315 CDS YP_396431.1 81429430 3778511 complement(1810169..1810255) 1 NC_007576.1 hypothetical protein 1810255 3778511 LSA1818 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396431.1 1810169 R 314315 CDS YP_396432.1 81429431 3778512 complement(1810329..1811210) 1 NC_007576.1 cell surface protein 1811210 3778512 LSA1819 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_396432.1 1810329 R 314315 CDS YP_396433.1 81429432 3777096 complement(1811229..1813343) 1 NC_007576.1 cell surface protein 1813343 3777096 LSA1820 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_396433.1 1811229 R 314315 CDS YP_396434.1 81429433 3777097 complement(1813496..1814098) 1 NC_007576.1 cell surface protein 1814098 3777097 LSA1821 Lactobacillus sakei subsp. sakei 23K cell surface protein YP_396434.1 1813496 R 314315 CDS YP_396435.1 81429434 3777098 complement(1814544..1815059) 1 NC_007576.1 hypothetical protein 1815059 3777098 LSA1822 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396435.1 1814544 R 314315 CDS YP_396436.1 81429435 3777099 complement(1815066..1815596) 1 NC_007576.1 hypothetical protein 1815596 3777099 LSA1823 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396436.1 1815066 R 314315 CDS YP_396437.1 81429436 3777100 complement(1815693..1816220) 1 NC_007576.1 GNAT family acetyltransferase 1816220 3777100 LSA1824 Lactobacillus sakei subsp. sakei 23K GNAT family acetyltransferase YP_396437.1 1815693 R 314315 CDS YP_396438.1 81429437 3777101 1816389..1816673 1 NC_007576.1 hypothetical protein 1816673 3777101 LSA1825 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396438.1 1816389 D 314315 CDS YP_396440.1 81429439 3777103 1817116..1818495 1 NC_007576.1 Na(+)/H(+) antiporter 1818495 nhaC 3777103 nhaC Lactobacillus sakei subsp. sakei 23K Na(+)/H(+) antiporter YP_396440.1 1817116 D 314315 CDS YP_396441.1 81429440 3778406 complement(1818811..1819404) 1 NC_007576.1 hypothetical protein 1819404 3778406 LSA1828 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396441.1 1818811 R 314315 CDS YP_396442.1 81429441 3778407 complement(1819510..1821243) 1 NC_007576.1 pyruvate oxidase 1821243 pox2 3778407 pox2 Lactobacillus sakei subsp. sakei 23K pyruvate oxidase YP_396442.1 1819510 R 314315 CDS YP_396443.1 81429442 3778408 1821441..1822397 1 NC_007576.1 Dyp-type peroxidase 1822397 3778408 LSA1831 Lactobacillus sakei subsp. sakei 23K Dyp-type peroxidase YP_396443.1 1821441 D 314315 CDS YP_396444.1 81429443 3778409 1822569..1823522 1 NC_007576.1 zinc-containing alcohol dehydrogenase (oxidoreductase) 1823522 3778409 LSA1832 Lactobacillus sakei subsp. sakei 23K zinc-containing alcohol dehydrogenase (oxidoreductase) YP_396444.1 1822569 D 314315 CDS YP_396445.1 81429444 3778410 complement(1823562..1824158) 1 NC_007576.1 hypothetical protein 1824158 3778410 LSA1833 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396445.1 1823562 R 314315 CDS YP_396446.1 81429445 3778411 1824347..1825060 1 NC_007576.1 hypothetical protein 1825060 3778411 LSA1834 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396446.1 1824347 D 314315 CDS YP_396447.1 81429446 3778412 1825150..1826133 1 NC_007576.1 zinc-containing alcohol dehydrogenase (oxidoreductase) 1826133 3778412 LSA1835 Lactobacillus sakei subsp. sakei 23K zinc-containing alcohol dehydrogenase (oxidoreductase) YP_396447.1 1825150 D 314315 CDS YP_396448.1 81429447 3778413 complement(1826179..1826874) 1 NC_007576.1 metal ion ABC transporter permease 1826874 3778413 LSA1836 Lactobacillus sakei subsp. sakei 23K metal ion ABC transporter permease YP_396448.1 1826179 R 314315 CDS YP_396449.1 81429448 3778340 complement(1826871..1828517) 1 NC_007576.1 metal ion ABC transporter ATP-binding subunit 1828517 3778340 LSA1837 Lactobacillus sakei subsp. sakei 23K metal ion ABC transporter ATP-binding subunit YP_396449.1 1826871 R 314315 CDS YP_396450.1 81429449 3778341 complement(1828484..1829416) 1 NC_007576.1 metal ion ABC transporter permease 1829416 3778341 LSA1838 Lactobacillus sakei subsp. sakei 23K metal ion ABC transporter permease YP_396450.1 1828484 R 314315 CDS YP_396451.1 81429450 3778342 complement(1829365..1830192) 1 NC_007576.1 metal ion ABC transporter substrate-binding lipoprotein 1830192 3778342 LSA1839 Lactobacillus sakei subsp. sakei 23K metal ion ABC transporter substrate-binding lipoprotein YP_396451.1 1829365 R 314315 CDS YP_396452.1 81429451 3778343 complement(1830204..1831664) 1 NC_007576.1 hypothetical protein 1831664 3778343 LSA1840 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396452.1 1830204 R 314315 CDS YP_396453.1 81429452 3778344 1831879..1833348 1 NC_007576.1 ABC transporter permease/transmembrane protein 1833348 3778344 LSA1841 Lactobacillus sakei subsp. sakei 23K ABC transporter permease/transmembrane protein YP_396453.1 1831879 D 314315 CDS YP_396454.1 81429453 3778345 1833364..1834026 1 NC_007576.1 ABC transporter ATP-binding protein 1834026 3778345 LSA1842 Lactobacillus sakei subsp. sakei 23K ABC transporter ATP-binding protein YP_396454.1 1833364 D 314315 CDS YP_396455.1 81429454 3778346 1834120..1834608 1 NC_007576.1 methylated-DNA-protein-cysteineS- methyltransferase 1834608 ogt 3778346 ogt Lactobacillus sakei subsp. sakei 23K methylated-DNA-protein-cysteineS- methyltransferase YP_396455.1 1834120 D 314315 CDS YP_396456.1 81429455 3778347 complement(1834651..1835304) 1 NC_007576.1 aquaporine Z 1835304 aqpZ 3778347 aqpZ Lactobacillus sakei subsp. sakei 23K aquaporine Z YP_396456.1 1834651 R 314315 CDS YP_396457.1 81429456 3778291 1835593..1835706 1 NC_007576.1 hypothetical protein 1835706 3778291 LSA1845 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396457.1 1835593 D 314315 CDS YP_396458.1 81429457 3778292 complement(1835766..1837514) 1 NC_007576.1 ATP-dependent DNA helicase RecQ 1837514 recQ2 3778292 recQ2 Lactobacillus sakei subsp. sakei 23K ATP-dependent DNA helicase RecQ YP_396458.1 1835766 R 314315 CDS YP_396459.1 81429458 3778293 complement(1837627..1838187) 1 NC_007576.1 hypothetical protein 1838187 3778293 LSA1847 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396459.1 1837627 R 314315 CDS YP_396460.1 81429459 3778294 1838302..1838634 1 NC_007576.1 hypothetical protein 1838634 3778294 LSA1848 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396460.1 1838302 D 314315 CDS YP_396461.1 81429460 3778295 1838739..1839008 1 NC_007576.1 hypothetical protein 1839008 3778295 LSA1849 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396461.1 1838739 D 314315 CDS YP_396462.1 81429461 3778296 1839076..1839588 1 NC_007576.1 hypothetical protein 1839588 3778296 LSA1850 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396462.1 1839076 D 314315 CDS YP_396463.1 81429462 3778297 1840481..1840864 1 NC_007576.1 hypothetical protein 1840864 3778297 LSA1851 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396463.1 1840481 D 314315 CDS YP_396464.1 81429463 3778298 complement(1840909..1841448) 1 NC_007576.1 isochorismatase/nicotamidase hydrolase 1841448 3778298 LSA1852 Lactobacillus sakei subsp. sakei 23K isochorismatase/nicotamidase hydrolase YP_396464.1 1840909 R 314315 CDS YP_396465.1 81429464 3778243 1841562..1841960 1 NC_007576.1 AsnC family transcriptional regulator 1841960 3778243 LSA1853 Lactobacillus sakei subsp. sakei 23K AsnC family transcriptional regulator YP_396465.1 1841562 D 314315 CDS YP_396466.1 81429465 3778244 complement(1841989..1842630) 1 NC_007576.1 DNA alkylation repair protein 1842630 3778244 LSA1854 Lactobacillus sakei subsp. sakei 23K DNA alkylation repair protein YP_396466.1 1841989 R 314315 CDS YP_396467.1 81429466 3778245 complement(1842640..1843251) 1 NC_007576.1 phosphoglycerate mutase 1843251 gpm5 3778245 gpm5 Lactobacillus sakei subsp. sakei 23K phosphoglycerate mutase YP_396467.1 1842640 R 314315 CDS YP_396468.1 81429467 3778246 complement(1843362..1844786) 1 NC_007576.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase 1844786 araA 3778246 araA Lactobacillus sakei subsp. sakei 23K L-arabinose isomerase YP_396468.1 1843362 R 314315 CDS YP_396469.1 81429468 3778247 complement(1845075..1845809) 1 NC_007576.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 1845809 araD 3778247 araD Lactobacillus sakei subsp. sakei 23K L-ribulose-5-phosphate 4-epimerase YP_396469.1 1845075 R 314315 CDS YP_396470.1 81429469 3778248 complement(1845820..1847430) 1 NC_007576.1 L-ribulokinase 1847430 araB 3778248 araB Lactobacillus sakei subsp. sakei 23K L-ribulokinase YP_396470.1 1845820 R 314315 CDS YP_396471.1 81429470 3778249 complement(1847450..1848832) 1 NC_007576.1 D-arabinose:H(+) symporter 1848832 araT 3778249 araT Lactobacillus sakei subsp. sakei 23K D-arabinose:H(+) symporter YP_396471.1 1847450 R 314315 CDS YP_396472.1 81429471 3778250 complement(1849132..1850208) 1 NC_007576.1 AraC family transcriptional regulator 1850208 araR 3778250 araR Lactobacillus sakei subsp. sakei 23K AraC family transcriptional regulator YP_396472.1 1849132 R 314315 CDS YP_396473.1 81429472 3778555 complement(1850394..1850537) 1 NC_007576.1 hypothetical protein 1850537 3778555 LSA1862 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396473.1 1850394 R 314315 CDS YP_396474.1 81429473 3778556 complement(1850537..1851019) 1 NC_007576.1 hypothetical protein 1851019 3778556 LSA1863 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396474.1 1850537 R 314315 CDS YP_396475.1 81429474 3778557 complement(1851032..1851340) 1 NC_007576.1 hypothetical protein 1851340 3778557 LSA1864 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396475.1 1851032 R 314315 CDS YP_396476.1 81429475 3778558 complement(1851437..1851976) 1 NC_007576.1 hypothetical protein 1851976 3778558 LSA1865 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396476.1 1851437 R 314315 CDS YP_396477.1 81429476 3778559 complement(1852043..1852510) 1 NC_007576.1 hypothetical protein 1852510 3778559 LSA1866 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396477.1 1852043 R 314315 CDS YP_396478.1 81429477 3778560 1852709..1853275 1 NC_007576.1 isoleucine patch superfamily acetyltransferase 1853275 3778560 LSA1867 Lactobacillus sakei subsp. sakei 23K isoleucine patch superfamily acetyltransferase YP_396478.1 1852709 D 314315 CDS YP_396479.1 81429478 3778561 complement(1853308..1854072) 1 NC_007576.1 MerR family transcriptional regulator 1854072 3778561 LSA1868 Lactobacillus sakei subsp. sakei 23K MerR family transcriptional regulator YP_396479.1 1853308 R 314315 CDS YP_396480.1 81429479 3778562 complement(1854136..1855662) 1 NC_007576.1 glycine/betaine/carnitine/choline ABC transporter substrate binding protein/permease 1855662 3778562 LSA1869 Lactobacillus sakei subsp. sakei 23K glycine/betaine/carnitine/choline ABC transporter substrate binding protein/permease YP_396480.1 1854136 R 314315 CDS YP_396481.1 81429480 3778065 complement(1855662..1856600) 1 NC_007576.1 glycine betaine/carnitine/choline ABC transporter ATP-binding subunit 1856600 3778065 LSA1870 Lactobacillus sakei subsp. sakei 23K glycine betaine/carnitine/choline ABC transporter ATP-binding subunit YP_396481.1 1855662 R 314315 CDS YP_396482.1 81429481 3778066 1856760..1858094 1 NC_007576.1 glutathione reductase 1858094 gshR 3778066 gshR Lactobacillus sakei subsp. sakei 23K glutathione reductase YP_396482.1 1856760 D 314315 CDS YP_396483.1 81429482 3778067 complement(1858132..1859604) 1 NC_007576.1 drug:H(+) antiporter 1859604 3778067 LSA1872 Lactobacillus sakei subsp. sakei 23K drug:H(+) antiporter YP_396483.1 1858132 R 314315 CDS YP_396484.1 81429483 3778068 complement(1859766..1860353) 1 NC_007576.1 hypothetical protein 1860353 3778068 LSA1873 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396484.1 1859766 R 314315 CDS YP_396485.1 81429484 3778069 complement(1860439..1860921) 1 NC_007576.1 MarR family transcriptional regulator 1860921 3778069 LSA1874 Lactobacillus sakei subsp. sakei 23K MarR family transcriptional regulator YP_396485.1 1860439 R 314315 CDS YP_396486.1 81429485 3778070 1861091..1862032 1 NC_007576.1 zinc-containing alcohol dehydrogenase (oxidoreductase) 1862032 3778070 LSA1875 Lactobacillus sakei subsp. sakei 23K zinc-containing alcohol dehydrogenase (oxidoreductase) YP_396486.1 1861091 D 314315 CDS YP_396487.1 81429486 3778071 complement(1862029..1862715) 1 NC_007576.1 hypothetical protein 1862715 3778071 LSA1876 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396487.1 1862029 R 314315 CDS YP_396488.1 81429487 3778072 complement(1862712..1863554) 1 NC_007576.1 hypothetical protein 1863554 3778072 LSA1877 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396488.1 1862712 R 314315 CDS YP_396489.1 81429488 3778073 complement(1874539..1876119) 1 NC_007576.1 drug resistance ABC transporter ATPase 1876119 3778073 LSA1878 Lactobacillus sakei subsp. sakei 23K drug resistance ABC transporter ATPase YP_396489.1 1874539 R 314315 CDS YP_396490.1 81429489 3777402 complement(1876244..1878136) 1 NC_007576.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 1878136 gidA 3777402 gidA Lactobacillus sakei subsp. sakei 23K tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_396490.1 1876244 R 314315 CDS YP_396491.1 81429490 3777403 complement(1878167..1879555) 1 NC_007576.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 1879555 trmE 3777403 trmE Lactobacillus sakei subsp. sakei 23K tRNA modification GTPase TrmE YP_396491.1 1878167 R 314315 CDS YP_396492.1 81429491 3777404 complement(1879714..1880436) 1 NC_007576.1 single-stranded nucleic acid binding protein 1880436 3777404 LSA1881 Lactobacillus sakei subsp. sakei 23K single-stranded nucleic acid binding protein YP_396492.1 1879714 R 314315 CDS YP_396493.1 81429492 3777405 complement(1880528..1882321) 1 NC_007576.1 oligoendopeptidase F2 1882321 pepF2 3777405 pepF2 Lactobacillus sakei subsp. sakei 23K oligoendopeptidase F2 YP_396493.1 1880528 R 314315 CDS YP_396494.1 81429493 3777406 1882478..1882828 1 NC_007576.1 hypothetical protein 1882828 3777406 LSA1883 Lactobacillus sakei subsp. sakei 23K hypothetical protein YP_396494.1 1882478 D 314315 CDS YP_396495.1 81429494 3777407 complement(1882883..1883716) 1 NC_007576.1 membrane protein chaperone oxaA 1883716 oxaA2 3777407 oxaA2 Lactobacillus sakei subsp. sakei 23K membrane protein chaperone oxaA YP_396495.1 1882883 R 314315 CDS YP_396496.1 81429495 3777408 complement(1883731..1884093) 1 NC_007576.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 1884093 rnpA 3777408 rnpA Lactobacillus sakei subsp. sakei 23K ribonuclease P YP_396496.1 1883731 R 314315 CDS YP_396497.1 81429496 3777409 complement(1884159..1884299) 1 NC_007576.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 1884299 rpmH 3777409 rpmH Lactobacillus sakei subsp. sakei 23K 50S ribosomal protein L34 YP_396497.1 1884159 R 314315 CDS