-- dump date   	20250217_000247
-- class       	Genbank::Contig
-- table       	contig_comment
-- id	comment
NZ_CP025491.2	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP025491.2.REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1.REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department,REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories.REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fastaREFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: FullREFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: NoREFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0xREFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford NanoporeREFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted)       :: 38 of 72REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted)       :: 38 of 72 Pseudo Genes (incomplete)         :: 50 of 72REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted)       :: 38 of 72 Pseudo Genes (incomplete)         :: 50 of 72 Pseudo Genes (internal stop)      :: 23 of 72REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted)       :: 38 of 72 Pseudo Genes (incomplete)         :: 50 of 72 Pseudo Genes (internal stop)      :: 23 of 72 Pseudo Genes (multiple problems)  :: 30 of 72REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted)       :: 38 of 72 Pseudo Genes (incomplete)         :: 50 of 72 Pseudo Genes (internal stop)      :: 23 of 72 Pseudo Genes (multiple problems)  :: 30 of 72 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP025491.2. On Feb 9, 2019 this sequence version replaced NZ_CP025491.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted)       :: 38 of 72 Pseudo Genes (incomplete)         :: 50 of 72 Pseudo Genes (internal stop)      :: 23 of 72 Pseudo Genes (multiple problems)  :: 30 of 72 ##Genome-Annotation-Data-END## COMPLETENESS: full length.
NZ_CP025493.2	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP025493.2.REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1.REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department,REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories.REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fastaREFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: FullREFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: NoREFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0xREFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford NanoporeREFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted)       :: 38 of 72REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted)       :: 38 of 72 Pseudo Genes (incomplete)         :: 50 of 72REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted)       :: 38 of 72 Pseudo Genes (incomplete)         :: 50 of 72 Pseudo Genes (internal stop)      :: 23 of 72REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted)       :: 38 of 72 Pseudo Genes (incomplete)         :: 50 of 72 Pseudo Genes (internal stop)      :: 23 of 72 Pseudo Genes (multiple problems)  :: 30 of 72REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted)       :: 38 of 72 Pseudo Genes (incomplete)         :: 50 of 72 Pseudo Genes (internal stop)      :: 23 of 72 Pseudo Genes (multiple problems)  :: 30 of 72 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP025493.2. On Feb 9, 2019 this sequence version replaced NZ_CP025493.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted)       :: 38 of 72 Pseudo Genes (incomplete)         :: 50 of 72 Pseudo Genes (internal stop)      :: 23 of 72 Pseudo Genes (multiple problems)  :: 30 of 72 ##Genome-Annotation-Data-END## COMPLETENESS: full length.
NZ_CP025492.2	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP025492.2.REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1.REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department,REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories.REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fastaREFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: FullREFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: NoREFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0xREFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford NanoporeREFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted)       :: 38 of 72REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted)       :: 38 of 72 Pseudo Genes (incomplete)         :: 50 of 72REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted)       :: 38 of 72 Pseudo Genes (incomplete)         :: 50 of 72 Pseudo Genes (internal stop)      :: 23 of 72REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted)       :: 38 of 72 Pseudo Genes (incomplete)         :: 50 of 72 Pseudo Genes (internal stop)      :: 23 of 72 Pseudo Genes (multiple problems)  :: 30 of 72REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted)       :: 38 of 72 Pseudo Genes (incomplete)         :: 50 of 72 Pseudo Genes (internal stop)      :: 23 of 72 Pseudo Genes (multiple problems)  :: 30 of 72 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP025492.2. On Feb 9, 2019 this sequence version replaced NZ_CP025492.1. Bacteria and source DNA available from Microbiology department, Canterbury Health Laboratories. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method        :: SPAdes v. v3.6.0; CANU v. v1.5;                           Nanopolish v. v0.5; Pilon v. v1.22;                           Unicycler v. 0.4.4 Assembly Name          :: LA01-117_contigs.fasta Genome Representation  :: Full Expected Final Version :: No Genome Coverage        :: 20.0x Sequencing Technology  :: Illumina MiSeq; MinIon-Oxford Nanopore ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_002848365.2-RS_2024_03_28 Annotation Date                   :: 03/28/2024 04:37:19 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,976 CDSs (total)                      :: 3,912 Genes (coding)                    :: 3,840 CDSs (with protein)               :: 3,840 Genes (RNA)                       :: 64 rRNAs                             :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S) tRNAs                             :: 48 ncRNAs                            :: 4 Pseudo Genes (total)              :: 72 CDSs (without protein)            :: 72 Pseudo Genes (ambiguous residues) :: 0 of 72 Pseudo Genes (frameshifted)       :: 38 of 72 Pseudo Genes (incomplete)         :: 50 of 72 Pseudo Genes (internal stop)      :: 23 of 72 Pseudo Genes (multiple problems)  :: 30 of 72 ##Genome-Annotation-Data-END## COMPLETENESS: full length.