-- dump date 20140619_131142 -- class Genbank::CDS -- table cds_note -- id note YP_796573.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_796574.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids YP_796575.1 cytoplasmic protein YP_796576.1 cytoplasmic protein YP_796577.1 cytoplasmic protein YP_796578.1 cytoplasmic protein YP_796579.1 cytoplasmic protein YP_796580.1 cytoplasmic protein YP_796581.1 cytoplasmic protein YP_796582.1 cytoplasmic protein YP_796583.1 outer membrane protein YP_796584.1 non-cytoplasmic protein YP_796585.1 cytoplasmic protein YP_796586.1 cytoplasmic protein YP_796587.1 cytoplasmic protein YP_796588.1 cytoplasmic protein YP_796589.1 inner membrane protein YP_796590.1 One of three proteins involved in switching the direction of the flagellar rotation YP_796591.1 cytoplasmic protein YP_796592.1 non-cytoplasmic protein YP_796593.1 non-cytoplasmic protein YP_796594.1 cytoplasmic protein YP_796595.1 non-cytoplasmic protein YP_796596.1 non-cytoplasmic protein YP_796597.1 non-cytoplasmic protein YP_796598.1 inner membrane protein YP_796599.1 inner membrane protein YP_796600.1 cytoplasmic protein YP_796601.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_796602.1 cytoplasmic protein YP_796603.1 cytoplasmic protein YP_796604.1 inner membrane protein YP_796605.1 cytoplasmic protein YP_796606.1 outer membrane protein YP_796607.1 inner membrane protein YP_796608.1 cytoplasmic protein YP_796609.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 YP_796610.1 cytoplasmic protein YP_796611.1 cytoplasmic protein YP_796612.1 cytoplasmic protein YP_796613.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys YP_796614.1 non-cytoplasmic protein YP_796615.1 cytoplasmic protein YP_796616.1 cytoplasmic protein YP_796617.1 cytoplasmic protein YP_796618.1 inner membrane protein YP_796619.1 inner membrane protein YP_796620.1 cytoplasmic protein YP_796621.1 cytoplasmic protein YP_796622.1 cytoplasmic protein YP_796623.1 cytoplasmic protein YP_796624.1 cytoplasmic protein YP_796625.1 cytoplasmic protein YP_796626.1 cytoplasmic protein YP_796627.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_796628.1 non-cytoplasmic protein YP_796629.1 periplasmic protein YP_796630.1 outer membrane protein YP_796631.1 cytoplasmic protein YP_796632.1 non-cytoplasmic protein YP_796633.1 cytoplasmic protein YP_796634.1 cytoplasmic protein YP_796635.1 cytoplasmic protein YP_796636.1 cytoplasmic protein YP_796637.1 cytoplasmic protein YP_796638.1 cytoplasmic protein YP_796639.1 non-cytoplasmic protein YP_796640.1 inner membrane protein YP_796641.1 inner membrane protein YP_796643.1 cytoplasmic protein YP_796644.1 inner membrane protein YP_796645.1 non-cytoplasmic protein YP_796646.1 inner membrane protein YP_796647.1 cytoplasmic protein YP_796648.1 inner membrane protein YP_796649.1 inner membrane protein YP_796650.1 cytoplasmic protein YP_796651.1 inner membrane protein YP_796652.1 cytoplasmic protein YP_796653.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook YP_796654.1 With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook YP_796655.1 binds to flagellin and appears to stabilize flagellin during flagella assembly YP_796656.1 affects carbohydrate metabolism; has regulatory role in many processes YP_796657.1 non-cytoplasmic protein YP_796658.1 inner membrane protein YP_796659.1 cytoplasmic protein YP_796660.1 cytoplasmic protein YP_796661.1 cytoplasmic protein YP_796662.1 cytoplasmic protein YP_796663.1 non-cytoplasmic protein YP_796664.1 non-cytoplasmic protein YP_796665.1 cytoplasmic protein YP_796666.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis YP_796667.1 inner membrane protein YP_796668.1 cytoplasmic protein YP_796669.1 cytoplasmic protein YP_796670.1 cytoplasmic protein YP_796671.1 inner membrane protein YP_796672.1 inner membrane protein YP_796673.1 inner membrane protein YP_796674.1 inner membrane protein YP_796675.1 non-cytoplasmic protein YP_796676.1 inner membrane protein YP_796677.1 cytoplasmic protein YP_796678.1 periplasmic protein YP_796679.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA YP_796680.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer YP_796681.1 cytoplasmic protein YP_796682.1 cytoplasmic protein YP_796683.1 inner membrane protein YP_796684.1 cytoplasmic protein YP_796685.1 cytoplasmic protein YP_796686.1 non-cytoplasmic protein YP_796687.1 non-cytoplasmic protein YP_796688.1 non-cytoplasmic protein YP_796689.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors YP_796690.1 inner membrane protein YP_796691.1 cytoplasmic protein YP_796692.1 cytoplasmic protein YP_796693.1 non-cytoplasmic protein YP_796694.1 cytoplasmic protein YP_796695.1 inner membrane protein YP_796696.1 cytoplasmic protein YP_796697.1 non-cytoplasmic protein YP_796698.1 periplasmic protein YP_796699.1 inner membrane protein YP_796700.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_796701.1 non-cytoplasmic protein YP_796702.1 cytoplasmic protein YP_796703.1 inner membrane protein YP_796704.1 inner membrane protein YP_796705.1 outer membrane protein YP_796706.1 cytoplasmic protein YP_796707.1 cytoplasmic protein YP_796708.1 inner membrane protein YP_796709.1 inner membrane protein YP_796710.1 non-cytoplasmic protein YP_796711.1 inner membrane protein YP_796712.1 cytoplasmic protein YP_796713.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_796714.1 inner membrane protein YP_796715.1 non-cytoplasmic protein YP_796716.1 cytoplasmic protein YP_796717.1 cytoplasmic protein YP_796718.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily YP_796719.1 non-cytoplasmic protein YP_796720.1 inner membrane protein YP_796721.1 non-cytoplasmic protein YP_796722.1 inner membrane protein YP_796723.1 inner membrane protein YP_796724.1 cytoplasmic protein YP_796725.1 inner membrane protein YP_796726.1 cytoplasmic protein YP_796727.1 cytoplasmic protein YP_796728.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming YP_796729.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_796730.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate YP_796731.1 cytoplasmic protein YP_796732.1 cytoplasmic protein YP_796733.1 cytoplasmic protein YP_796734.1 cytoplasmic protein YP_796735.1 inner membrane protein YP_796736.1 cytoplasmic protein YP_796737.1 cytoplasmic protein YP_796738.1 cytoplasmic protein YP_796739.1 non-cytoplasmic protein YP_796740.1 cytoplasmic protein YP_796741.1 non-cytoplasmic protein YP_796742.1 cytoplasmic protein YP_796743.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine YP_796744.1 inner membrane protein YP_796745.1 outer membrane protein YP_796746.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_796747.1 cytoplasmic protein YP_796748.1 non-cytoplasmic protein YP_796749.1 cytoplasmic protein YP_796750.1 cytoplasmic protein YP_796751.1 cytoplasmic protein YP_796752.1 non-cytoplasmic protein YP_796753.1 cytoplasmic protein YP_796754.1 inner membrane protein YP_796755.1 cytoplasmic protein YP_796756.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis YP_796757.1 cytoplasmic protein YP_796758.1 cytoplasmic protein YP_796759.1 cytoplasmic protein YP_796760.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity YP_796761.1 inner membrane protein YP_796762.1 cytoplasmic protein YP_796763.1 non-cytoplasmic protein YP_796764.1 cytoplasmic protein YP_796765.1 cytoplasmic protein YP_796766.1 cytoplasmic protein YP_796767.1 cytoplasmic protein YP_796768.1 cytoplasmic protein YP_796769.1 cytoplasmic protein YP_796770.1 non-cytoplasmic protein YP_796771.1 cytoplasmic protein YP_796772.1 outer membrane protein YP_796773.1 non-cytoplasmic protein YP_796774.1 inner membrane protein YP_796775.1 inner membrane protein YP_796776.1 cytoplasmic protein YP_796777.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_796778.1 cytoplasmic protein YP_796779.1 cytoplasmic protein YP_796780.1 cytoplasmic protein YP_796781.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide YP_796782.1 inner membrane protein YP_796783.1 non-cytoplasmic protein YP_796784.1 inner membrane protein YP_796785.1 non-cytoplasmic protein YP_796786.1 inner membrane protein YP_796787.1 non-cytoplasmic protein YP_796788.1 non-cytoplasmic protein YP_796789.1 inner membrane protein YP_796790.1 cytoplasmic protein YP_796791.1 inner membrane protein YP_796792.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole YP_796793.1 inner membrane protein YP_796794.1 non-cytoplasmic protein YP_796795.1 cytoplasmic protein YP_796796.1 inner membrane protein YP_796797.1 non-cytoplasmic protein YP_796798.1 cytoplasmic protein YP_796799.1 inner membrane protein YP_796800.1 cytoplasmic protein YP_796801.1 cytoplasmic protein YP_796802.1 cytoplasmic protein YP_796803.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_796804.1 Ser/Thr protein kinase; cytoplasmic protein YP_796805.1 cytoplasmic protein YP_796806.1 cytoplasmic protein YP_796807.1 cytoplasmic protein YP_796808.1 inner membrane protein YP_796809.1 non-cytoplasmic protein YP_796810.1 cytoplasmic protein YP_796811.1 inner membrane protein YP_796812.1 cytoplasmic protein YP_796813.1 cytoplasmic protein YP_796814.1 cytoplasmic protein YP_796815.1 inner membrane protein YP_796816.1 catalyzes the formation of 2-oxoglutarate from isocitrate YP_796817.1 cytochrome oxidase assembly factor; inner membrane protein YP_796818.1 inner membrane protein YP_796819.1 cytoplasmic protein YP_796820.1 non-cytoplasmic protein YP_796821.1 inner membrane protein YP_796822.1 inner membrane protein YP_796823.1 inner membrane protein YP_796824.1 outer membrane protein YP_796825.1 cytoplasmic protein YP_796826.1 inner membrane protein YP_796827.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP YP_796828.1 inner membrane protein YP_796829.1 non-cytoplasmic protein YP_796830.1 cytoplasmic protein YP_796831.1 cytoplasmic protein YP_796832.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_796833.1 cytoplasmic protein YP_796834.1 non-cytoplasmic protein YP_796835.1 cytoplasmic protein YP_796836.1 cytoplasmic protein YP_796837.1 cytoplasmic protein YP_796838.1 cytoplasmic protein YP_796839.1 cytoplasmic protein YP_796840.1 inner membrane protein YP_796841.1 non-cytoplasmic protein YP_796842.1 inner membrane protein YP_796843.1 cytoplasmic protein YP_796844.1 cytoplasmic protein YP_796845.1 cytoplasmic protein YP_796846.1 cytoplasmic protein YP_796847.1 non-cytoplasmic protein YP_796848.1 cytoplasmic protein YP_796849.1 cytoplasmic protein YP_796850.1 cytoplasmic protein YP_796851.1 non-cytoplasmic protein YP_796852.1 non-cytoplasmic protein YP_796853.1 cytoplasmic protein YP_796854.1 inner membrane protein YP_796855.1 inner membrane protein YP_796856.1 non-cytoplasmic protein YP_796857.1 cytoplasmic protein YP_796858.1 cytoplasmic protein YP_796859.1 outer membrane protein YP_796860.1 cytoplasmic protein YP_796861.1 non-cytoplasmic protein YP_796862.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine YP_796863.1 non-cytoplasmic protein YP_796864.1 forms a junction between the M-ring and FlgB during the flagella biosynthesis YP_796865.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod YP_796866.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod YP_796867.1 cytoplasmic protein YP_796868.1 non-cytoplasmic protein YP_796869.1 non-cytoplasmic protein YP_796870.1 inner membrane protein YP_796871.1 inner membrane protein YP_796872.1 inner membrane protein YP_796873.1 non-cytoplasmic protein YP_796874.1 cytoplasmic protein YP_796875.1 cytoplasmic protein YP_796876.1 cytoplasmic protein YP_796877.1 cytoplasmic protein YP_796878.1 cytoplasmic protein YP_796879.1 cytoplasmic protein YP_796880.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine YP_796881.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor YP_796882.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein YP_796883.1 cytoplasmic protein YP_796884.1 cytoplasmic protein YP_796885.1 cytoplasmic protein YP_796886.1 non-cytoplasmic protein YP_796887.1 cytoplasmic protein YP_796888.1 cytoplasmic protein YP_796889.1 non-cytoplasmic protein YP_796890.1 inner membrane protein YP_796891.1 cytoplasmic protein YP_796892.1 cytoplasmic protein YP_796893.1 cytoplasmic protein YP_796894.1 non-cytoplasmic protein YP_796895.1 cytoplasmic protein YP_796896.1 cytoplasmic protein YP_796897.1 inner membrane protein YP_796898.1 inner membrane protein YP_796899.1 cytoplasmic protein YP_796900.1 cytoplasmic protein YP_796901.1 non-cytoplasmic protein YP_796902.1 periplasmic protein YP_796903.1 cytoplasmic protein YP_796904.1 non-cytoplasmic protein YP_796905.1 non-cytoplasmic protein YP_796906.1 cytoplasmic protein YP_796907.1 outer membrane protein YP_796908.1 cytoplasmic protein YP_796909.1 non-cytoplasmic protein YP_796910.1 inner membrane protein YP_796911.1 cytoplasmic protein YP_796912.1 non-cytoplasmic protein YP_796913.1 non-cytoplasmic protein YP_796914.1 cytoplasmic protein YP_796915.1 outer membrane protein YP_796916.1 cytoplasmic protein YP_796917.1 cytoplasmic protein YP_796918.1 cytoplasmic protein YP_796919.1 cytoplasmic protein YP_796920.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis YP_796921.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine YP_796922.1 cytoplasmic protein YP_796923.1 cytoplasmic protein YP_796924.1 cytoplasmic protein YP_796925.1 cytoplasmic protein YP_796926.1 inner membrane protein YP_796927.1 antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein YP_796928.1 cytoplasmic protein YP_796929.1 non-cytoplasmic protein YP_796930.1 outer membrane protein YP_796931.1 cytoplasmic protein YP_796932.1 inner membrane protein YP_796933.1 periplasmic protein YP_796934.1 periplasmic protein YP_796935.1 cytoplasmic protein YP_796936.1 cytoplasmic protein YP_796937.1 cytoplasmic protein YP_796938.1 cytoplasmic protein YP_796939.1 cytoplasmic protein YP_796940.1 inner membrane protein YP_796941.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_796942.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_796943.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_796944.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_796945.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_796946.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_796947.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_796948.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_796949.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_796950.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation YP_796951.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_796952.1 one of the stabilizing components for the large ribosomal subunit YP_796953.1 primary binding protein; helps mediate assembly; involved in translation fidelity YP_796954.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_796955.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_796956.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_796957.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif YP_796958.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit YP_796959.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_796960.1 binds 5S rRNA along with protein L5 and L25 YP_796961.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_796962.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_796963.1 late assembly protein YP_796964.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_796965.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_796966.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_796967.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif YP_796968.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_796969.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_796970.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_796971.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_796972.1 is a component of the macrolide binding site in the peptidyl transferase center YP_796973.1 cytoplasmic protein YP_796974.1 non-cytoplasmic protein YP_796975.1 cytoplasmic protein YP_796976.1 cytoplasmic protein YP_796977.1 cytoplasmic protein YP_796978.1 non-cytoplasmic protein YP_796979.1 cytoplasmic protein YP_796980.1 inner membrane protein YP_796981.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_796982.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_796983.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_796984.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_796985.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_796986.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_796987.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_796988.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_796989.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_796990.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation YP_796991.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_796992.1 one of the stabilizing components for the large ribosomal subunit YP_796993.1 primary binding protein; helps mediate assembly; involved in translation fidelity YP_796994.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_796995.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_796996.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_796997.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif YP_796998.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit YP_796999.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_797000.1 binds 5S rRNA along with protein L5 and L25 YP_797001.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_797002.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_797003.1 late assembly protein YP_797004.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_797005.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_797006.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_797007.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif YP_797008.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_797009.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_797010.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_797011.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_797012.1 is a component of the macrolide binding site in the peptidyl transferase center YP_797013.1 cytoplasmic protein YP_797014.1 non-cytoplasmic protein YP_797015.1 cytoplasmic protein YP_797016.1 cytoplasmic protein YP_797017.1 cytoplasmic protein YP_797018.1 cytoplasmic protein YP_797019.1 cytoplasmic protein YP_797020.1 cytoplasmic protein YP_797021.1 cytoplasmic protein YP_797022.1 cytoplasmic protein YP_797023.1 cytoplasmic protein YP_797024.1 inner membrane protein YP_797025.1 non-cytoplasmic protein YP_797026.1 inner membrane protein YP_797027.1 cytoplasmic protein YP_797028.1 non-cytoplasmic protein YP_797029.1 cytoplasmic protein YP_797030.1 cytoplasmic protein YP_797031.1 cytoplasmic protein YP_797032.1 inner membrane protein YP_797033.1 cytoplasmic protein YP_797034.1 cytoplasmic protein YP_797035.1 cytoplasmic protein YP_797036.1 inner membrane protein YP_797037.1 cytoplasmic protein YP_797038.1 outer membrane protein YP_797039.1 cytoplasmic protein YP_797040.1 cytoplasmic protein YP_797041.1 non-cytoplasmic protein YP_797042.1 outer membrane protein YP_797043.1 cytoplasmic protein YP_797044.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine YP_797045.1 non-cytoplasmic protein YP_797046.1 cytoplasmic protein YP_797047.1 cytoplasmic protein YP_797048.1 inner membrane protein YP_797049.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_797050.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response YP_797051.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP YP_797052.1 cytoplasmic protein YP_797053.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis YP_797054.1 cytoplasmic protein YP_797055.1 inner membrane protein YP_797056.1 cytoplasmic protein YP_797057.1 cytoplasmic protein YP_797058.1 cytoplasmic protein YP_797059.1 non-cytoplasmic protein YP_797060.1 cytoplasmic protein YP_797061.1 cytoplasmic protein YP_797062.1 cytoplasmic protein YP_797063.1 inner membrane protein YP_797064.1 cytoplasmic protein YP_797065.1 cytoplasmic protein YP_797066.1 cytoplasmic protein YP_797067.1 non-cytoplasmic protein YP_797068.1 inner membrane protein YP_797069.1 cytoplasmic protein YP_797070.1 cytoplasmic protein YP_797071.1 cytoplasmic protein YP_797072.1 cytoplasmic protein YP_797073.1 cytoplasmic protein YP_797074.1 cytoplasmic protein YP_797075.1 cytoplasmic protein YP_797076.1 cytoplasmic protein YP_797077.1 non-cytoplasmic protein YP_797078.1 inner membrane protein YP_797079.1 inner membrane protein YP_797080.1 non-cytoplasmic protein YP_797081.1 cytoplasmic protein YP_797082.1 inner membrane protein YP_797083.1 inner membrane protein YP_797084.1 inner membrane protein YP_797085.1 cytoplasmic protein YP_797086.1 cytoplasmic protein YP_797087.1 cytoplasmic protein YP_797088.1 cytoplasmic protein YP_797089.1 cytoplasmic protein YP_797090.1 cytoplasmic protein YP_797091.1 cytoplasmic protein YP_797092.1 cytoplasmic protein YP_797093.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase YP_797094.1 cytoplasmic protein YP_797095.1 inner membrane protein YP_797096.1 cytoplasmic protein YP_797097.1 cytoplasmic protein YP_797098.1 cytoplasmic protein YP_797099.1 non-cytoplasmic protein YP_797100.1 cytoplasmic protein YP_797101.1 cytoplasmic protein YP_797102.1 inner membrane protein YP_797103.1 cytoplasmic protein YP_797104.1 cytoplasmic protein YP_797105.1 outer membrane protein YP_797106.1 non-cytoplasmic protein YP_797107.1 cytoplasmic protein YP_797108.1 cytoplasmic protein YP_797109.1 cytoplasmic protein YP_797110.1 non-cytoplasmic protein YP_797111.1 cytoplasmic protein YP_797112.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_797113.1 cytoplasmic protein YP_797114.1 non-cytoplasmic protein YP_797115.1 non-cytoplasmic protein YP_797116.1 non-cytoplasmic protein YP_797117.1 cytoplasmic protein YP_797118.1 cytoplasmic protein YP_797119.1 cytoplasmic protein YP_797120.1 non-cytoplasmic protein YP_797121.1 inner membrane protein YP_797122.1 periplasmic protein YP_797123.1 inner membrane protein YP_797124.1 cytoplasmic protein YP_797125.1 cytoplasmic protein YP_797126.1 non-cytoplasmic protein YP_797127.1 cytoplasmic protein YP_797128.1 cytoplasmic protein YP_797129.1 cytoplasmic protein YP_797130.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_797131.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis YP_797132.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication YP_797133.1 involved in the peptidyltransferase reaction during translation YP_797134.1 cytoplasmic protein YP_797135.1 cytoplasmic protein YP_797136.1 inner membrane protein YP_797137.1 cytoplasmic protein YP_797138.1 cytoplasmic protein YP_797139.1 cytoplasmic protein YP_797140.1 non-cytoplasmic protein YP_797141.1 inner membrane protein YP_797142.1 cytoplasmic protein YP_797143.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not YP_797144.1 Regulates rRNA biosynthesis by transcriptional antitermination YP_797145.1 non-cytoplasmic protein YP_797146.1 non-cytoplasmic protein YP_797147.1 cytoplasmic protein YP_797148.1 outer membrane protein YP_797149.1 inner membrane protein YP_797150.1 cytoplasmic protein YP_797151.1 cytoplasmic protein YP_797152.1 cytoplasmic protein YP_797153.1 cytoplasmic protein YP_797154.1 cytoplasmic protein YP_797155.1 inner membrane protein YP_797156.1 cytoplasmic protein YP_797157.1 non-cytoplasmic protein YP_797158.1 inner membrane protein YP_797159.1 inner membrane protein YP_797160.1 cytoplasmic protein YP_797161.1 cytoplasmic protein YP_797162.1 inner membrane protein YP_797163.1 cytoplasmic protein YP_797164.1 cytoplasmic protein YP_797165.1 cytoplasmic protein YP_797166.1 cytoplasmic protein YP_797167.1 cytoplasmic protein YP_797168.1 cytoplasmic protein YP_797169.1 inner membrane protein YP_797170.1 cytoplasmic protein YP_797171.1 cytoplasmic protein YP_797172.1 cytoplasmic protein YP_797173.1 cytoplasmic protein YP_797174.1 cytoplasmic protein YP_797175.1 cytoplasmic protein YP_797176.1 cytoplasmic protein YP_797177.1 cytoplasmic protein YP_797178.1 cytoplasmic protein YP_797179.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_797180.1 cytoplasmic protein YP_797181.1 periplasmic protein YP_797182.1 cytoplasmic protein YP_797183.1 cytoplasmic protein YP_797184.1 inner membrane protein YP_797185.1 cytoplasmic protein YP_797186.1 inner membrane protein YP_797187.1 cytoplasmic protein YP_797188.1 cytoplasmic protein YP_797189.1 cytoplasmic protein YP_797190.1 cytoplasmic protein YP_797191.1 outer membrane protein YP_797192.1 outer membrane protein YP_797193.1 inner membrane protein YP_797194.1 cytoplasmic protein YP_797195.1 cytoplasmic protein YP_797196.1 cytoplasmic protein YP_797197.1 inner membrane protein YP_797198.1 cytoplasmic protein YP_797199.1 inner membrane protein YP_797200.1 cytoplasmic protein YP_797201.1 cytoplasmic protein YP_797202.1 cytoplasmic protein YP_797203.1 inner membrane protein YP_797204.1 non-cytoplasmic protein YP_797205.1 non-cytoplasmic protein YP_797206.1 cytoplasmic protein YP_797207.1 cytoplasmic protein YP_797208.1 cytoplasmic protein YP_797209.1 inner membrane protein YP_797210.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_797211.1 forms a direct contact with the tRNA during translation YP_797212.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_797213.1 putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription YP_797214.1 cytoplasmic protein YP_797215.1 non-cytoplasmic protein YP_797216.1 non-cytoplasmic protein YP_797217.1 non-cytoplasmic protein YP_797218.1 non-cytoplasmic protein YP_797220.1 cytoplasmic protein YP_797221.1 cytoplasmic protein YP_797222.1 non-cytoplasmic protein YP_797223.1 inner membrane protein YP_797224.1 cytoplasmic protein YP_797225.1 non-cytoplasmic protein YP_797226.1 periplasmic protein YP_797227.1 non-cytoplasmic protein YP_797228.1 non-cytoplasmic protein YP_797229.1 non-cytoplasmic protein YP_797230.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force YP_797231.1 cytoplasmic protein YP_797232.1 binds directly to 23S ribosomal RNA YP_797233.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_797234.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit YP_797235.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_797236.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_797237.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter YP_797238.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_797239.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_797240.1 cytoplasmic protein YP_797241.1 cytoplasmic protein YP_797242.1 cytoplasmic protein YP_797243.1 cytoplasmic protein YP_797244.1 non-cytoplasmic protein YP_797245.1 inner membrane protein YP_797246.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_797247.1 cytoplasmic protein YP_797248.1 cytoplasmic protein YP_797249.1 cytoplasmic protein YP_797250.1 non-cytoplasmic protein YP_797251.1 cytoplasmic protein YP_797252.1 cytoplasmic protein YP_797253.1 non-cytoplasmic protein YP_797254.1 non-cytoplasmic protein YP_797255.1 outer membrane protein YP_797256.1 outer membrane protein YP_797257.1 inner membrane protein YP_797258.1 cytoplasmic protein YP_797259.1 cytoplasmic protein YP_797260.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate YP_797261.1 inner membrane protein YP_797262.1 cytoplasmic protein YP_797263.1 cytoplasmic protein YP_797264.1 inner membrane protein YP_797265.1 cytoplasmic protein YP_797266.1 inner membrane protein YP_797267.1 inner membrane protein YP_797268.1 inner membrane protein YP_797269.1 cytoplasmic protein YP_797270.1 cytoplasmic protein YP_797271.1 inner membrane protein YP_797272.1 non-cytoplasmic protein YP_797273.1 inner membrane protein YP_797274.1 non-cytoplasmic protein YP_797275.1 cytoplasmic protein YP_797276.1 cytoplasmic protein YP_797277.1 cytoplasmic protein YP_797278.1 cytoplasmic protein YP_797279.1 inner membrane protein YP_797280.1 cytoplasmic protein YP_797281.1 inner membrane protein YP_797282.1 cytoplasmic protein YP_797283.1 non-cytoplasmic protein YP_797284.1 outer membrane protein YP_797285.1 cytoplasmic protein YP_797286.1 cytoplasmic protein YP_797287.1 inner membrane protein YP_797288.1 contains a C-terminal domain related to MutT/nudix family of proteins; cytoplasmic protein YP_797289.1 cytoplasmic protein YP_797290.1 cytoplasmic protein YP_797291.1 cytoplasmic protein YP_797292.1 non-cytoplasmic protein YP_797293.1 cytoplasmic protein YP_797294.1 cytoplasmic protein YP_797295.1 inner membrane protein YP_797296.1 cytoplasmic protein YP_797297.1 cytoplasmic protein YP_797298.1 outer membrane protein YP_797299.1 non-cytoplasmic protein YP_797300.1 outer membrane protein YP_797301.1 non-cytoplasmic protein YP_797302.1 non-cytoplasmic protein YP_797303.1 cytoplasmic protein YP_797304.1 cytoplasmic protein YP_797305.1 non-cytoplasmic protein YP_797306.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_797307.1 cytoplasmic protein YP_797308.1 cytoplasmic protein YP_797309.1 cytoplasmic protein YP_797310.1 cytoplasmic protein YP_797311.1 non-cytoplasmic protein YP_797312.1 cytoplasmic protein YP_797313.1 cytoplasmic protein YP_797314.1 cytoplasmic protein YP_797315.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_797316.1 cytoplasmic protein YP_797317.1 cytoplasmic protein YP_797318.1 cytoplasmic protein YP_797319.1 non-cytoplasmic protein YP_797320.1 outer membrane protein YP_797321.1 cytoplasmic protein YP_797322.1 catalyzes the interconversion of succinyl-CoA and succinate YP_797323.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_797324.1 non-cytoplasmic protein YP_797325.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme YP_797326.1 non-cytoplasmic protein YP_797327.1 cytoplasmic protein YP_797328.1 cytoplasmic protein YP_797329.1 cytoplasmic protein YP_797330.1 non-cytoplasmic protein YP_797331.1 cytoplasmic protein YP_797332.1 inner membrane protein YP_797333.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_797334.1 cytoplasmic protein YP_797335.1 inner membrane protein YP_797336.1 cytoplasmic protein YP_797337.1 inner membrane protein YP_797338.1 cytoplasmic protein YP_797339.1 inner membrane protein YP_797340.1 inner membrane protein YP_797341.1 cytoplasmic protein YP_797342.1 cytoplasmic protein YP_797343.1 non-cytoplasmic protein YP_797344.1 cytoplasmic protein YP_797345.1 non-cytoplasmic protein YP_797346.1 cytoplasmic protein YP_797347.1 inner membrane protein YP_797348.1 cytoplasmic protein YP_797349.1 outer membrane protein YP_797350.1 cytoplasmic protein YP_797351.1 cytoplasmic protein YP_797352.1 cytoplasmic protein YP_797353.1 cytoplasmic protein YP_797354.1 non-cytoplasmic protein YP_797355.1 inner membrane protein YP_797356.1 cytoplasmic protein YP_797357.1 non-cytoplasmic protein YP_797358.1 cytoplasmic protein YP_797359.1 inner membrane protein YP_797360.1 non-cytoplasmic protein YP_797361.1 cytoplasmic protein YP_797362.1 cytoplasmic protein YP_797363.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_797364.1 inner membrane protein YP_797365.1 cytoplasmic protein YP_797366.1 non-cytoplasmic protein YP_797367.1 catalyzes the formation of methylglyoxal from glycerone phosphate YP_797368.1 cytoplasmic protein YP_797369.1 cytoplasmic protein YP_797370.1 inner membrane protein YP_797371.1 cytoplasmic protein YP_797372.1 inner membrane protein YP_797373.1 cytoplasmic protein YP_797374.1 cytoplasmic protein YP_797375.1 non-cytoplasmic protein YP_797376.1 inner membrane protein YP_797377.1 cytoplasmic protein YP_797378.1 non-cytoplasmic protein YP_797379.1 inner membrane protein YP_797380.1 inner membrane protein YP_797381.1 cytoplasmic protein YP_797382.1 cytoplasmic protein YP_797383.1 cytoplasmic protein YP_797384.1 inner membrane protein YP_797385.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis YP_797386.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis YP_797387.1 inner membrane protein YP_797388.1 outer membrane protein YP_797389.1 cytoplasmic protein YP_797390.1 cytoplasmic protein YP_797391.1 cytoplasmic protein YP_797392.1 non-cytoplasmic protein YP_797393.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_797394.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_797395.1 Catalyzes the phosphorylation of UMP to UDP YP_797396.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_797397.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate YP_797398.1 inner membrane protein YP_797399.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_797400.1 inner membrane protein YP_797401.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_797402.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_797403.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis YP_797404.1 cytoplasmic protein YP_797405.1 inner membrane protein YP_797406.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate YP_797407.1 cytoplasmic protein YP_797408.1 cytoplasmic protein YP_797409.1 non-cytoplasmic protein YP_797410.1 outer membrane protein YP_797411.1 cytoplasmic protein YP_797412.1 cytoplasmic protein YP_797413.1 carries the fatty acid chain in fatty acid biosynthesis YP_797414.1 cytoplasmic protein YP_797415.1 cytoplasmic protein YP_797416.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis YP_797417.1 inner membrane protein YP_797418.1 cytoplasmic protein YP_797419.1 cytoplasmic protein YP_797420.1 cytoplasmic protein YP_797421.1 non-cytoplasmic protein YP_797422.1 non-cytoplasmic protein YP_797423.1 cytoplasmic protein YP_797424.1 cytoplasmic protein YP_797425.1 inner membrane protein YP_797426.1 cytoplasmic protein YP_797427.1 inner membrane protein YP_797428.1 non-cytoplasmic protein YP_797429.1 outer membrane protein YP_797430.1 non-cytoplasmic protein YP_797431.1 outer membrane protein YP_797432.1 inner membrane protein YP_797433.1 non-cytoplasmic protein YP_797434.1 cytoplasmic protein YP_797435.1 inner membrane protein YP_797436.1 non-cytoplasmic protein YP_797437.1 cytoplasmic protein YP_797438.1 non-cytoplasmic protein YP_797439.1 non-cytoplasmic protein YP_797440.1 cytoplasmic protein YP_797441.1 cytoplasmic protein YP_797442.1 outer membrane protein YP_797443.1 non-cytoplasmic protein YP_797444.1 non-cytoplasmic protein YP_797445.1 non-cytoplasmic protein YP_797446.1 non-cytoplasmic protein YP_797447.1 non-cytoplasmic protein YP_797448.1 cytoplasmic protein YP_797449.1 inner membrane protein YP_797450.1 cytoplasmic protein YP_797451.1 cytoplasmic protein YP_797452.1 inner membrane protein YP_797453.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_797454.1 cytoplasmic protein YP_797455.1 cytoplasmic protein YP_797456.1 inner membrane protein YP_797457.1 inner membrane protein YP_797458.1 non-cytoplasmic protein YP_797459.1 cytoplasmic protein YP_797460.1 non-cytoplasmic protein YP_797461.1 non-cytoplasmic protein YP_797462.1 non-cytoplasmic protein YP_797463.1 cytoplasmic protein YP_797464.1 cytoplasmic protein YP_797465.1 cytoplasmic protein YP_797466.1 non-cytoplasmic protein YP_797467.1 cytoplasmic protein YP_797468.1 cytoplasmic protein YP_797469.1 cytoplasmic protein YP_797470.1 cytoplasmic protein YP_797471.1 cytoplasmic protein YP_797472.1 non-cytoplasmic protein YP_797473.1 inner membrane protein YP_797474.1 cytoplasmic protein YP_797475.1 cytoplasmic protein YP_797476.1 cytoplasmic protein YP_797477.1 cytoplasmic protein YP_797478.1 cytoplasmic protein YP_797479.1 cytoplasmic protein YP_797481.1 cytoplasmic protein YP_797482.1 cytoplasmic protein YP_797483.1 cytoplasmic protein YP_797484.1 cytoplasmic protein YP_797485.1 cytoplasmic protein YP_797486.1 cytoplasmic protein YP_797487.1 inner membrane protein YP_797488.1 cytoplasmic protein YP_797489.1 cytoplasmic protein YP_797490.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation YP_797491.1 cytoplasmic protein YP_797492.1 cytoplasmic protein YP_797493.1 non-cytoplasmic protein YP_797494.1 inner membrane protein YP_797495.1 cytoplasmic protein YP_797496.1 inner membrane protein YP_797497.1 inner membrane protein YP_797498.1 cytoplasmic protein YP_797499.1 cytoplasmic protein YP_797500.1 non-cytoplasmic protein YP_797501.1 inner membrane protein YP_797502.1 non-cytoplasmic protein YP_797503.1 cytoplasmic protein YP_797504.1 cytoplasmic protein YP_797505.1 cytoplasmic protein YP_797506.1 cytoplasmic protein YP_797507.1 cytoplasmic protein YP_797508.1 cytoplasmic protein YP_797509.1 non-cytoplasmic protein YP_797510.1 inner membrane protein YP_797511.1 inner membrane protein YP_797512.1 non-cytoplasmic protein YP_797513.1 cytoplasmic protein YP_797514.1 inner membrane protein YP_797515.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein YP_797516.1 non-cytoplasmic protein YP_797517.1 cytoplasmic protein YP_797518.1 cytoplasmic protein YP_797519.1 cytoplasmic protein YP_797520.1 cytoplasmic protein YP_797521.1 cytoplasmic protein YP_797522.1 cytoplasmic protein YP_797523.1 inner membrane protein YP_797524.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_797525.1 periplasmic protein YP_797526.1 non-cytoplasmic protein YP_797527.1 Represses a number of genes involved in the response to DNA damage YP_797528.1 cytoplasmic protein YP_797529.1 cytoplasmic protein YP_797530.1 inner membrane protein YP_797531.1 inner membrane protein YP_797532.1 cytoplasmic protein YP_797533.1 cytoplasmic protein YP_797534.1 non-cytoplasmic protein YP_797535.1 inner membrane protein YP_797536.1 cytoplasmic protein YP_797537.1 cytoplasmic protein YP_797538.1 cytoplasmic protein YP_797539.1 cytoplasmic protein YP_797540.1 makes up the distal portion of the flagellar basal body rod YP_797541.1 non-cytoplasmic protein YP_797542.1 periplasmic protein YP_797543.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum YP_797544.1 non-cytoplasmic protein YP_797545.1 cytoplasmic protein YP_797546.1 cytoplasmic protein YP_797547.1 cytoplasmic protein YP_797548.1 cytoplasmic protein YP_797549.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth YP_797550.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring YP_797551.1 member of the NlpC/P60 superfamily of peptidases YP_797552.1 cytoplasmic protein YP_797553.1 inner membrane protein YP_797554.1 cytoplasmic protein YP_797555.1 non-cytoplasmic protein YP_797556.1 non-cytoplasmic protein YP_797557.1 cytoplasmic protein YP_797558.1 cytoplasmic protein YP_797559.1 binds to and inhibits the function of flagella specific ATPase FliI YP_797560.1 cytoplasmic protein YP_797561.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod YP_797562.1 cytoplasmic protein YP_797563.1 cytoplasmic protein YP_797564.1 cytoplasmic protein YP_797565.1 non-cytoplasmic protein YP_797566.1 cytoplasmic protein YP_797567.1 inner membrane protein YP_797568.1 inner membrane protein YP_797569.1 cytoplasmic protein YP_797570.1 cytoplasmic protein YP_797571.1 cytoplasmic protein YP_797572.1 cytoplasmic protein YP_797573.1 inner membrane protein YP_797574.1 cytoplasmic protein YP_797575.1 cytoplasmic protein YP_797576.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit YP_797577.1 cytoplasmic protein YP_797578.1 cytoplasmic protein YP_797579.1 non-cytoplasmic protein YP_797580.1 non-cytoplasmic protein YP_797581.1 cytoplasmic protein YP_797582.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates YP_797583.1 binds and unfolds substrates as part of the ClpXP protease YP_797584.1 inner membrane protein YP_797585.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages YP_797586.1 cytoplasmic protein YP_797587.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate YP_797588.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis YP_797589.1 non-cytoplasmic protein YP_797590.1 cytoplasmic protein YP_797591.1 inner membrane protein YP_797592.1 inner membrane protein YP_797593.1 non-cytoplasmic protein YP_797594.1 cytoplasmic protein YP_797595.1 inner membrane protein YP_797596.1 cytoplasmic protein YP_797597.1 cytoplasmic protein YP_797598.1 non-cytoplasmic protein YP_797599.1 non-cytoplasmic protein YP_797600.1 cytoplasmic protein YP_797601.1 cytoplasmic protein YP_797602.1 cytoplasmic protein YP_797603.1 cytoplasmic protein YP_797604.1 cytoplasmic protein YP_797605.1 cytoplasmic protein YP_797606.1 cytoplasmic protein YP_797607.1 cytoplasmic protein YP_797608.1 cytoplasmic protein YP_797609.1 cytoplasmic protein YP_797610.1 cytoplasmic protein YP_797611.1 inner membrane protein YP_797612.1 cytoplasmic protein YP_797613.1 inner membrane protein YP_797614.1 cytoplasmic protein YP_797615.1 cytoplasmic protein YP_797616.1 cytoplasmic protein YP_797617.1 cytoplasmic protein YP_797618.1 cytoplasmic protein YP_797619.1 cytoplasmic protein YP_797620.1 cytoplasmic protein YP_797621.1 cytoplasmic protein YP_797622.1 cytoplasmic protein YP_797623.1 cytoplasmic protein YP_797624.1 cytoplasmic protein YP_797625.1 inner membrane protein YP_797626.1 cytoplasmic protein YP_797627.1 cytoplasmic protein YP_797628.1 cytoplasmic protein YP_797629.1 cytoplasmic protein YP_797630.1 cytoplasmic protein YP_797631.1 cytoplasmic protein YP_797632.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS YP_797633.1 cytoplasmic protein YP_797634.1 outer membrane protein YP_797635.1 cytoplasmic protein YP_797636.1 cytoplasmic protein YP_797637.1 non-cytoplasmic protein YP_797638.1 inner membrane protein YP_797639.1 cytoplasmic protein YP_797640.1 cytoplasmic protein YP_797641.1 cytoplasmic protein YP_797642.1 cytoplasmic protein YP_797643.1 cytoplasmic protein YP_797644.1 cytoplasmic protein YP_797645.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_797646.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamide and glutamine to imidazole-glycerolphosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_797647.1 cytoplasmic protein YP_797648.1 cytoplasmic protein YP_797649.1 cytoplasmic protein YP_797650.1 cytoplasmic protein YP_797651.1 cytoplasmic protein YP_797652.1 cytoplasmic protein YP_797653.1 cytoplasmic protein YP_797654.1 cytoplasmic protein YP_797655.1 inner membrane protein YP_797656.1 inner membrane protein YP_797657.1 inner membrane protein YP_797658.1 cytoplasmic protein YP_797659.1 cytoplasmic protein YP_797660.1 cytoplasmic protein YP_797661.1 cytoplasmic protein YP_797662.1 cytoplasmic protein YP_797663.1 cytoplasmic protein YP_797664.1 cytoplasmic protein YP_797665.1 outer membrane protein YP_797666.1 cytoplasmic protein YP_797667.1 cytoplasmic protein YP_797668.1 cytoplasmic protein YP_797669.1 cytoplasmic protein YP_797670.1 cytoplasmic protein YP_797671.1 cytoplasmic protein YP_797672.1 cytoplasmic protein YP_797673.1 inner membrane protein YP_797674.1 cytoplasmic protein YP_797675.1 non-cytoplasmic protein YP_797676.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 YP_797677.1 cytoplasmic protein YP_797678.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_797679.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_797680.1 cytoplasmic protein YP_797681.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes YP_797682.1 cytoplasmic protein YP_797683.1 inner membrane protein YP_797684.1 cytoplasmic protein YP_797685.1 cytoplasmic protein YP_797686.1 cytoplasmic protein YP_797687.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_797688.1 cytoplasmic protein YP_797689.1 non-cytoplasmic protein YP_797690.1 cytoplasmic protein YP_797691.1 cytoplasmic protein YP_797692.1 cytoplasmic protein YP_797693.1 cytoplasmic protein YP_797694.1 cytoplasmic protein YP_797695.1 cytoplasmic protein YP_797696.1 cytoplasmic protein YP_797697.1 cytoplasmic protein YP_797698.1 non-cytoplasmic protein YP_797699.1 inner membrane protein YP_797700.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate YP_797701.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway YP_797702.1 cytoplasmic protein YP_797703.1 cytoplasmic protein YP_797704.1 cytoplasmic protein YP_797705.1 inner membrane protein YP_797706.1 cytoplasmic protein YP_797707.1 cytoplasmic protein YP_797708.1 cytoplasmic protein YP_797709.1 cytoplasmic protein YP_797710.1 cytoplasmic protein YP_797711.1 cytoplasmic protein YP_797712.1 cytoplasmic protein YP_797713.1 cytoplasmic protein YP_797714.1 non-cytoplasmic protein YP_797715.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5) YP_797716.1 cytoplasmic protein YP_797717.1 cytoplasmic protein YP_797718.1 non-cytoplasmic protein YP_797719.1 cytoplasmic protein YP_797720.1 inner membrane protein YP_797721.1 cytoplasmic protein YP_797722.1 cytoplasmic protein YP_797723.1 cytoplasmic protein YP_797724.1 cytoplasmic protein YP_797725.1 cytoplasmic protein YP_797726.1 cytoplasmic protein YP_797727.1 cytoplasmic protein YP_797728.1 inner membrane protein YP_797729.1 inner membrane protein YP_797730.1 cytoplasmic protein YP_797731.1 cytoplasmic protein YP_797732.1 cytoplasmic protein YP_797733.1 cytoplasmic protein YP_797734.1 cytoplasmic protein YP_797735.1 cytoplasmic protein YP_797736.1 inner membrane protein YP_797737.1 outer membrane protein YP_797738.1 non-cytoplasmic protein YP_797739.1 non-cytoplasmic protein YP_797740.1 cytoplasmic protein YP_797741.1 cytoplasmic protein YP_797742.1 catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acyltransferase within the complex. The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2); it contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase YP_797743.1 cytoplasmic protein YP_797744.1 cytoplasmic protein YP_797745.1 part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation YP_797746.1 non-cytoplasmic protein YP_797747.1 inner membrane protein YP_797748.1 periplasmic protein YP_797749.1 periplasmic protein YP_797750.1 non-cytoplasmic protein YP_797751.1 outer membrane protein YP_797752.1 outer membrane protein YP_797753.1 non-cytoplasmic protein YP_797754.1 cytoplasmic protein YP_797755.1 non-cytoplasmic protein YP_797756.1 inner membrane protein YP_797757.1 non-cytoplasmic protein YP_797758.1 periplasmic protein YP_797759.1 periplasmic protein YP_797760.1 cytoplasmic protein YP_797761.1 inner membrane protein YP_797762.1 non-cytoplasmic protein YP_797763.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_797764.1 cytoplasmic protein YP_797765.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine YP_797766.1 inner membrane protein YP_797767.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase YP_797768.1 cytoplasmic protein YP_797769.1 non-cytoplasmic protein YP_797770.1 non-cytoplasmic protein YP_797771.1 cytoplasmic protein YP_797772.1 cytoplasmic protein YP_797773.1 inner membrane protein YP_797774.1 inner membrane protein YP_797775.1 inner membrane protein YP_797776.1 non-cytoplasmic protein YP_797777.1 catalyzes the formation of arginine from (N-L-arginino)succinate YP_797778.1 cytoplasmic protein YP_797779.1 cytoplasmic protein YP_797780.1 non-cytoplasmic protein YP_797781.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation YP_797782.1 cytoplasmic protein YP_797783.1 non-cytoplasmic protein YP_797784.1 inner membrane protein YP_797785.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis YP_797786.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_797787.1 cytoplasmic protein YP_797788.1 inner membrane protein YP_797789.1 cytoplasmic protein YP_797790.1 cytoplasmic protein YP_797791.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate YP_797792.1 cytoplasmic protein YP_797793.1 non-cytoplasmic protein YP_797794.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate YP_797795.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D YP_797796.1 cytoplasmic protein YP_797797.1 cytoplasmic protein YP_797798.1 inner membrane protein YP_797799.1 cytoplasmic protein YP_797800.1 cytoplasmic protein YP_797801.1 cytoplasmic protein YP_797802.1 cytoplasmic protein YP_797803.1 periplasmic protein YP_797804.1 cytoplasmic protein YP_797805.1 cytoplasmic protein YP_797806.1 cytoplasmic protein YP_797807.1 cytoplasmic protein YP_797808.1 cytoplasmic protein YP_797809.1 cytoplasmic protein YP_797810.1 inner membrane protein YP_797811.1 cytoplasmic protein YP_797812.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide YP_797813.1 cytoplasmic protein YP_797814.1 cytoplasmic protein YP_797815.1 cytoplasmic protein YP_797816.1 cytoplasmic protein YP_797817.1 cytoplasmic protein YP_797818.1 cytoplasmic protein YP_797819.1 inner membrane protein YP_797820.1 non-cytoplasmic protein YP_797821.1 Transfers an unknown molecule to Undecaprenol- phosphate; inner membrane protein YP_797822.1 non-cytoplasmic protein YP_797823.1 cytoplasmic protein YP_797824.1 cytoplasmic protein YP_797825.1 non-cytoplasmic protein YP_797826.1 cytoplasmic protein YP_797827.1 inner membrane protein YP_797828.1 cytoplasmic protein YP_797829.1 non-cytoplasmic protein YP_797830.1 cytoplasmic protein YP_797831.1 cytoplasmic protein YP_797832.1 catalyzes the oxidation of malate to oxaloacetate YP_797833.1 cytoplasmic protein YP_797834.1 cytoplasmic protein YP_797835.1 cytoplasmic protein YP_797836.1 cytoplasmic protein YP_797837.1 non-cytoplasmic protein YP_797838.1 cytoplasmic protein YP_797839.1 This protein performs the mismatch recognition step during the DNA repair process YP_797840.1 cytoplasmic protein YP_797841.1 cytoplasmic protein YP_797842.1 cytoplasmic protein YP_797843.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis YP_797844.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine YP_797845.1 cytoplasmic protein YP_797846.1 inner membrane protein YP_797847.1 cytoplasmic protein YP_797848.1 cytoplasmic protein YP_797849.1 required for 70S ribosome assembly YP_797850.1 cytoplasmic protein YP_797851.1 cytoplasmic protein YP_797852.1 cytoplasmic protein YP_797853.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision YP_797854.1 non-cytoplasmic protein YP_797855.1 non-cytoplasmic protein YP_797856.1 non-cytoplasmic protein YP_797857.1 cytoplasmic protein YP_797858.1 cytoplasmic protein YP_797859.1 inner membrane protein YP_797860.1 cytoplasmic protein YP_797861.1 cytoplasmic protein YP_797862.1 cytoplasmic protein YP_797863.1 cytoplasmic protein YP_797864.1 cytoplasmic protein YP_797865.1 non-cytoplasmic protein YP_797866.1 outer membrane protein YP_797867.1 non-cytoplasmic protein YP_797868.1 cytoplasmic protein YP_797869.1 non-cytoplasmic protein YP_797870.1 non-cytoplasmic protein YP_797871.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_797872.1 cytoplasmic protein YP_797873.1 cytoplasmic protein YP_797874.1 cytoplasmic protein YP_797875.1 cytoplasmic protein YP_797876.1 cytoplasmic protein YP_797877.1 cytoplasmic protein YP_797878.1 cytoplasmic protein YP_797879.1 cytoplasmic protein YP_797880.1 inner membrane protein YP_797881.1 cytoplasmic protein YP_797882.1 cytoplasmic protein YP_797883.1 cytoplasmic protein YP_797884.1 cytoplasmic protein YP_797885.1 periplasmic protein YP_797886.1 cytoplasmic protein YP_797887.1 non-cytoplasmic protein YP_797888.1 periplasmic protein YP_797889.1 cytoplasmic protein YP_797890.1 inner membrane protein YP_797891.1 non-cytoplasmic protein YP_797892.1 Catalyzes the rate-limiting step in dNTP synthesis YP_797893.1 cytoplasmic protein YP_797894.1 catalyzes the bidirectional exonucleolytic cleavage of DNA YP_797895.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides YP_797896.1 inner membrane protein YP_797897.1 cytoplasmic protein YP_797898.1 inner membrane protein YP_797899.1 cytoplasmic protein YP_797900.1 cytoplasmic protein YP_797901.1 cytoplasmic protein YP_797902.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_797903.1 cytoplasmic protein YP_797904.1 heat shock protein involved in degradation of misfolded proteins YP_797905.1 heat shock protein involved in degradation of misfolded proteins YP_797906.1 cytoplasmic protein YP_797907.1 cytoplasmic protein YP_797908.1 cytoplasmic protein YP_797909.1 cytoplasmic protein YP_797910.1 cytoplasmic protein YP_797911.1 cytoplasmic protein YP_797912.1 cytoplasmic protein YP_797913.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin YP_797914.1 cytoplasmic protein YP_797915.1 outer membrane protein YP_797916.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_797917.1 cytoplasmic protein YP_797918.1 cytoplasmic protein YP_797919.1 cytoplasmic protein YP_797920.1 cytoplasmic protein YP_797921.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_797922.1 cytoplasmic protein YP_797923.1 cytoplasmic protein YP_797924.1 inner membrane protein YP_797925.1 non-cytoplasmic protein YP_797926.1 outer membrane protein YP_797927.1 cytoplasmic protein YP_797928.1 non-cytoplasmic protein YP_797929.1 cytoplasmic protein YP_797930.1 cytoplasmic protein YP_797931.1 cytoplasmic protein YP_797932.1 non-cytoplasmic protein YP_797933.1 cytoplasmic protein YP_797934.1 cytoplasmic protein YP_797935.1 cytoplasmic protein YP_797936.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis YP_797937.1 cytoplasmic protein YP_797938.1 cytoplasmic protein YP_797939.1 cytoplasmic protein YP_797940.1 cytoplasmic protein YP_797941.1 inner membrane protein YP_797942.1 cytoplasmic protein YP_797943.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_797944.1 cytoplasmic protein YP_797945.1 inner membrane protein YP_797946.1 cytoplasmic protein YP_797947.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity YP_797948.1 non-cytoplasmic protein YP_797949.1 inner membrane protein YP_797950.1 involved in de novo purine biosynthesis YP_797951.1 cytoplasmic protein YP_797952.1 cytoplasmic protein YP_797953.1 cytoplasmic protein YP_797954.1 cytoplasmic protein YP_797955.1 non-cytoplasmic protein YP_797956.1 cytoplasmic protein YP_797957.1 inner membrane protein YP_797958.1 cytoplasmic protein YP_797959.1 non-cytoplasmic protein YP_797960.1 cytoplasmic protein YP_797961.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate YP_797962.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs YP_797963.1 non-cytoplasmic protein YP_797964.1 cytoplasmic protein YP_797965.1 cytoplasmic protein YP_797968.1 outer membrane protein YP_797969.1 inner membrane protein YP_797970.1 cytoplasmic protein YP_797971.1 cytoplasmic protein YP_797972.1 cytoplasmic protein YP_797973.1 cytoplasmic protein YP_797974.1 cytoplasmic protein YP_797975.1 cytoplasmic protein YP_797976.1 cytoplasmic protein YP_797977.1 cytoplasmic protein YP_797978.1 cytoplasmic protein YP_797979.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis YP_797980.1 cytoplasmic protein YP_797981.1 inner membrane protein YP_797982.1 inner membrane protein YP_797983.1 inner membrane protein YP_797984.1 non-cytoplasmic protein YP_797985.1 cytoplasmic protein YP_797986.1 cytoplasmic protein YP_797987.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate YP_797988.1 cytoplasmic protein YP_797989.1 cytoplasmic protein YP_797990.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_797991.1 cytoplasmic protein YP_797992.1 cytoplasmic protein YP_797993.1 cytoplasmic protein YP_797994.1 cytoplasmic protein YP_797995.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) YP_797996.1 cytoplasmic protein YP_797997.1 cytoplasmic protein YP_797998.1 non-cytoplasmic protein YP_797999.1 non-cytoplasmic protein YP_798000.1 non-cytoplasmic protein YP_798001.1 cytoplasmic protein YP_798002.1 cytoplasmic protein YP_798003.1 inner membrane protein YP_798004.1 inner membrane protein YP_798005.1 cytoplasmic protein YP_798006.1 inner membrane protein YP_798007.1 cytoplasmic protein YP_798008.1 cytoplasmic protein YP_798009.1 cytoplasmic protein YP_798010.1 inner membrane protein YP_798011.1 cytoplasmic protein YP_798012.1 cytoplasmic protein YP_798013.1 outer membrane protein YP_798014.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate YP_798015.1 cytoplasmic protein YP_798016.1 cytoplasmic protein YP_798017.1 cytoplasmic protein YP_798018.1 cytoplasmic protein YP_798019.1 cytoplasmic protein YP_798020.1 cytoplasmic protein YP_798021.1 cytoplasmic protein YP_798022.1 non-cytoplasmic protein YP_798023.1 inner membrane protein YP_798024.1 non-cytoplasmic protein YP_798025.1 outer membrane protein YP_798026.1 non-cytoplasmic protein YP_798027.1 inner membrane protein YP_798028.1 cytoplasmic protein YP_798029.1 inner membrane protein YP_798030.1 non-cytoplasmic protein YP_798031.1 non-cytoplasmic protein YP_798032.1 non-cytoplasmic protein YP_798033.1 cytoplasmic protein YP_798034.1 cytoplasmic protein YP_798035.1 cytoplasmic protein YP_798036.1 cytoplasmic protein YP_798037.1 cytoplasmic protein YP_798038.1 cytoplasmic protein YP_798039.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site YP_798040.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; Chlamydial proteins show a C-terminal extension of unknown function YP_798041.1 Essential for efficient processing of 16S rRNA YP_798042.1 cytoplasmic protein YP_798043.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity YP_798044.1 cytoplasmic protein YP_798045.1 non-cytoplasmic protein YP_798046.1 cytoplasmic protein YP_798047.1 cytoplasmic protein YP_798048.1 cytoplasmic protein YP_798049.1 cytoplasmic protein YP_798050.1 inner membrane protein YP_798051.1 cytoplasmic protein YP_798052.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system YP_798053.1 cytoplasmic protein YP_798054.1 cytoplasmic protein YP_798055.1 non-cytoplasmic protein YP_798056.1 non-cytoplasmic protein YP_798057.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis YP_798058.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_798059.1 cytoplasmic protein YP_798060.1 cytoplasmic protein YP_798061.1 cytoplasmic protein YP_798062.1 cytoplasmic protein YP_798063.1 cytoplasmic protein YP_798064.1 inner membrane protein YP_798065.1 cytoplasmic protein YP_798066.1 cytoplasmic protein YP_798067.1 cytoplasmic protein YP_798068.1 cytoplasmic protein YP_798069.1 cytoplasmic protein YP_798070.1 non-cytoplasmic protein YP_798071.1 inner membrane protein YP_798072.1 inner membrane protein YP_798073.1 cytoplasmic protein YP_798074.1 inner membrane protein YP_798075.1 non-cytoplasmic protein YP_798076.1 non-cytoplasmic protein YP_798077.1 cytoplasmic protein YP_798078.1 non-cytoplasmic protein YP_798079.1 cytoplasmic protein YP_798080.1 cytoplasmic protein YP_798081.1 CcoN; FixN YP_798082.1 CcoO; FixO YP_798083.1 inner membrane protein YP_798084.1 inner membrane protein YP_798085.1 inner membrane protein YP_798086.1 non-cytoplasmic protein YP_798087.1 inner membrane protein YP_798088.1 inner membrane protein YP_798089.1 inner membrane protein YP_798090.1 cytoplasmic protein YP_798091.1 non-cytoplasmic protein YP_798092.1 Ser/Thr protein kinase; cytoplasmic protein YP_798093.1 cytoplasmic protein YP_798094.1 non-cytoplasmic protein YP_798095.1 outer membrane protein YP_798096.1 inner membrane protein YP_798097.1 non-cytoplasmic protein YP_798098.1 cytoplasmic protein YP_798099.1 cytoplasmic protein YP_798100.1 non-cytoplasmic protein YP_798101.1 outer membrane protein YP_798102.1 non-cytoplasmic protein YP_798103.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_798104.1 cytoplasmic protein YP_798105.1 cytoplasmic protein YP_798106.1 cytoplasmic protein YP_798107.1 cytoplasmic protein YP_798108.1 cytoplasmic protein YP_798109.1 cytoplasmic protein YP_798110.1 inner membrane protein YP_798111.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_798112.1 cytoplasmic protein YP_798113.1 cytoplasmic protein YP_798114.1 non-cytoplasmic protein YP_798115.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_798116.1 inner membrane protein YP_798117.1 cytoplasmic protein YP_798118.1 inner membrane protein YP_798119.1 cytoplasmic protein YP_798120.1 non-cytoplasmic protein YP_798121.1 cytoplasmic protein YP_798122.1 non-cytoplasmic protein YP_798123.1 non-cytoplasmic protein YP_798124.1 cytoplasmic protein YP_798125.1 inner membrane protein YP_798126.1 inner membrane protein YP_798127.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 YP_798128.1 cytoplasmic protein YP_798129.1 cytoplasmic protein YP_798130.1 cytoplasmic protein YP_798131.1 non-cytoplasmic protein YP_798132.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase YP_798133.1 non-cytoplasmic protein YP_798134.1 cytoplasmic protein YP_798135.1 cytoplasmic protein YP_798136.1 inner membrane protein YP_798137.1 inner membrane protein YP_798138.1 inner membrane protein YP_798139.1 cytoplasmic protein YP_798140.1 cytoplasmic protein YP_798141.1 cytoplasmic protein YP_798142.1 inner membrane protein YP_798143.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate YP_798144.1 cytoplasmic protein YP_798145.1 cytoplasmic protein YP_798146.1 inner membrane protein YP_798147.1 cytoplasmic protein YP_798148.1 cytoplasmic protein YP_798149.1 inner membrane protein YP_798150.1 non-cytoplasmic protein YP_798151.1 inner membrane protein YP_798152.1 outer membrane protein YP_798153.1 non-cytoplasmic protein YP_798154.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins YP_798155.1 cytoplasmic protein YP_798156.1 non-cytoplasmic protein YP_798157.1 non-cytoplasmic protein YP_798158.1 cytoplasmic protein YP_798159.1 cytoplasmic protein YP_798160.1 cytoplasmic protein YP_798161.1 cytoplasmic protein YP_798162.1 inner membrane protein YP_798163.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_798164.1 cytoplasmic protein YP_798165.1 cytoplasmic protein YP_798166.1 cytoplasmic protein YP_798167.1 non-cytoplasmic protein YP_798168.1 non-cytoplasmic protein YP_798169.1 non-cytoplasmic protein YP_798170.1 cytoplasmic protein YP_798171.1 cytoplasmic protein YP_798172.1 cytoplasmic protein YP_798173.1 cytoplasmic protein YP_798174.1 cytoplasmic protein YP_798175.1 inner membrane protein YP_798176.1 cytoplasmic protein YP_798177.1 cytoplasmic protein YP_798178.1 cytoplasmic protein YP_798179.1 cytoplasmic protein YP_798180.1 cytoplasmic protein YP_798181.1 non-cytoplasmic protein YP_798182.1 inner membrane protein YP_798183.1 inner membrane protein YP_798184.1 inner membrane protein YP_798185.1 cytoplasmic protein YP_798186.1 cytoplasmic protein YP_798187.1 cytoplasmic protein YP_798188.1 non-cytoplasmic protein YP_798189.1 cytoplasmic protein YP_798191.1 cytoplasmic protein YP_798192.1 cytoplasmic protein YP_798193.1 cytoplasmic protein YP_798194.1 periplasmic protein YP_798195.1 cytoplasmic protein YP_798196.1 outer membrane protein YP_798197.1 cytoplasmic protein YP_798198.1 cytoplasmic protein YP_798199.1 cytoplasmic protein YP_798201.1 cytoplasmic protein YP_798202.1 inner membrane protein YP_798203.1 cytoplasmic protein YP_798204.1 non-cytoplasmic protein YP_798205.1 Essential for recycling GMP and indirectly, cGMP YP_798206.1 cytoplasmic protein YP_798207.1 cytoplasmic protein YP_798208.1 cytoplasmic protein YP_798209.1 cytoplasmic protein YP_798210.1 involved in the initiation of sporulation and glycogen biosynthesis YP_798211.1 inner membrane protein YP_798212.1 cytoplasmic protein YP_798213.1 Positive regulator of class III flagellar genes YP_798214.1 inner membrane protein YP_798215.1 inner membrane protein YP_798216.1 inner membrane protein YP_798217.1 inner membrane protein YP_798218.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus YP_798219.1 inner membrane protein YP_798220.1 cytoplasmic protein YP_798221.1 cytoplasmic protein YP_798222.1 inner membrane protein YP_798223.1 outer membrane protein YP_798224.1 inner membrane protein YP_798225.1 cytoplasmic protein YP_798226.1 cytoplasmic protein YP_798227.1 cytoplasmic protein YP_798228.1 cytoplasmic protein YP_798229.1 non-cytoplasmic protein YP_798230.1 cytoplasmic protein YP_798231.1 cytoplasmic protein YP_798232.1 cytoplasmic protein YP_798234.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase YP_798235.1 cytoplasmic protein YP_798236.1 outer membrane protein YP_798237.1 cytoplasmic protein YP_798238.1 cytoplasmic protein YP_798239.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_798240.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate YP_798241.1 cytoplasmic protein YP_798242.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_798243.1 cytoplasmic protein YP_798244.1 non-cytoplasmic protein YP_798245.1 cytoplasmic protein YP_798246.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_798247.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_798248.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain YP_798249.1 inner membrane protein YP_798250.1 outer membrane protein YP_798251.1 inner membrane protein YP_798252.1 inner membrane protein YP_798253.1 cytoplasmic protein YP_798254.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_798255.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer YP_798256.1 cytoplasmic protein YP_798257.1 cytoplasmic protein YP_798258.1 cytoplasmic protein YP_798259.1 non-cytoplasmic protein YP_798260.1 non-cytoplasmic protein YP_798261.1 non-cytoplasmic protein YP_798262.1 cytoplasmic protein YP_798263.1 cytoplasmic protein YP_798264.1 non-cytoplasmic protein YP_798265.1 cytoplasmic protein YP_798266.1 cytoplasmic protein YP_798267.1 cytoplasmic protein YP_798268.1 inner membrane protein YP_798269.1 cytoplasmic protein YP_798270.1 cytoplasmic protein YP_798271.1 non-cytoplasmic protein YP_798272.1 outer membrane protein YP_798273.1 inner membrane protein YP_798274.1 cytoplasmic protein YP_798275.1 cytoplasmic protein YP_798276.1 cytoplasmic protein YP_798277.1 non-cytoplasmic protein YP_798278.1 non-cytoplasmic protein YP_798279.1 non-cytoplasmic protein YP_798280.1 cytoplasmic protein YP_798281.1 non-cytoplasmic protein YP_798282.1 cytoplasmic protein YP_798283.1 non-cytoplasmic protein YP_798284.1 cytoplasmic protein YP_798285.1 cytoplasmic protein YP_798286.1 cytoplasmic protein YP_798287.1 involved in the de novo synthesis of pyridoxine (Vitamin B6) YP_798288.1 cytoplasmic protein YP_798289.1 non-cytoplasmic protein YP_798290.1 non-cytoplasmic protein YP_798291.1 non-cytoplasmic protein YP_798292.1 cytoplasmic protein YP_798293.1 non-cytoplasmic protein YP_798294.1 cytoplasmic protein YP_798295.1 cytoplasmic protein YP_798296.1 non-cytoplasmic protein YP_798297.1 non-cytoplasmic protein YP_798298.1 cytoplasmic protein YP_798299.1 cytoplasmic protein YP_798300.1 non-cytoplasmic protein YP_798301.1 non-cytoplasmic protein YP_798302.1 non-cytoplasmic protein YP_798303.1 cytoplasmic protein YP_798304.1 cytoplasmic protein YP_798305.1 cytoplasmic protein YP_798306.1 cytoplasmic protein YP_798307.1 cytoplasmic protein YP_798308.1 cytoplasmic protein YP_798309.1 inner membrane protein YP_798310.1 inner membrane protein YP_798311.1 non-cytoplasmic protein YP_798312.1 periplasmic protein YP_798313.1 cytoplasmic protein YP_798314.1 cytoplasmic protein YP_798315.1 cytoplasmic protein YP_798316.1 cytoplasmic protein YP_798317.1 non-cytoplasmic protein YP_798318.1 cytoplasmic protein YP_798319.1 inner membrane protein YP_798320.1 non-cytoplasmic protein YP_798321.1 inner membrane protein YP_798322.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall YP_798323.1 functions in MreBCD complex in some organisms YP_798324.1 cytoplasmic protein YP_798325.1 non-cytoplasmic protein YP_798326.1 cytoplasmic protein YP_798327.1 cytoplasmic protein YP_798328.1 inner membrane protein YP_798329.1 cytoplasmic protein YP_798330.1 cytoplasmic protein YP_798331.1 inner membrane protein YP_798332.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex YP_798333.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_798334.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the gamma chain is a regulatory subunit YP_798335.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_798336.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex YP_798337.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit B is part of the membrane proton channel YP_798338.1 inner membrane protein YP_798339.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit A is part of the membrane proton channel F0 YP_798340.1 inner membrane protein YP_798341.1 cytoplasmic protein YP_798342.1 inner membrane protein YP_798343.1 cytoplasmic protein YP_798344.1 inner membrane protein YP_798345.1 cytoplasmic protein YP_798346.1 cytoplasmic protein YP_798347.1 cytoplasmic protein YP_798348.1 cytoplasmic protein YP_798349.1 cytoplasmic protein YP_798350.1 cytoplasmic protein YP_798351.1 non-cytoplasmic protein YP_798352.1 cytoplasmic protein YP_798353.1 cytoplasmic protein YP_798354.1 cytoplasmic protein YP_798355.1 cytoplasmic protein YP_798356.1 inner membrane protein YP_798357.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_798358.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_798359.1 cytoplasmic protein YP_798360.1 cytoplasmic protein YP_798361.1 inner membrane protein YP_798362.1 cytoplasmic protein YP_798363.1 cytoplasmic protein YP_798364.1 cytoplasmic protein YP_798365.1 inner membrane protein YP_798366.1 cytoplasmic protein YP_798367.1 cytoplasmic protein YP_798368.1 cytoplasmic protein YP_798369.1 cytochrome b1; cytoplasmic protein YP_798370.1 cytoplasmic protein YP_798371.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate YP_798372.1 cytoplasmic protein YP_798373.1 cytoplasmic protein YP_798374.1 inner membrane protein YP_798375.1 non-cytoplasmic protein YP_798376.1 non-cytoplasmic protein YP_798377.1 non-cytoplasmic protein YP_798378.1 inner membrane protein YP_798379.1 inner membrane protein YP_798380.1 non-cytoplasmic protein YP_798381.1 cytoplasmic protein YP_798382.1 cytoplasmic protein YP_798383.1 inner membrane protein YP_798384.1 cytoplasmic protein YP_798385.1 cytoplasmic protein YP_798386.1 cytoplasmic protein YP_798387.1 cytoplasmic protein YP_798388.1 cytoplasmic protein YP_798389.1 cytoplasmic protein YP_798390.1 cytoplasmic protein YP_798391.1 non-cytoplasmic protein YP_798392.1 inner membrane protein YP_798393.1 inner membrane protein YP_798394.1 cytoplasmic protein YP_798395.1 cytoplasmic protein YP_798396.1 inner membrane protein YP_798397.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_798398.1 non-cytoplasmic protein YP_798399.1 cytoplasmic protein YP_798400.1 cytoplasmic protein YP_798401.1 cytoplasmic protein YP_798402.1 cytoplasmic protein YP_798403.1 non-cytoplasmic protein YP_798404.1 non-cytoplasmic protein YP_798405.1 cytoplasmic protein YP_798406.1 inner membrane protein YP_798407.1 cytoplasmic protein YP_798408.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient YP_798409.1 non-cytoplasmic protein YP_798410.1 non-cytoplasmic protein YP_798411.1 non-cytoplasmic protein YP_798412.1 non-cytoplasmic protein YP_798413.1 inner membrane protein YP_798414.1 inner membrane protein YP_798415.1 cytoplasmic protein YP_798416.1 cytoplasmic protein YP_798417.1 cytoplasmic protein YP_798418.1 cytoplasmic protein YP_798419.1 cytoplasmic protein YP_798420.1 cytoplasmic protein YP_798421.1 cytoplasmic protein YP_798422.1 non-cytoplasmic protein YP_798423.1 cytoplasmic protein YP_798424.1 inner membrane protein YP_798425.1 cytoplasmic protein YP_798426.1 cytoplasmic protein YP_798427.1 non-cytoplasmic protein YP_798428.1 cytoplasmic protein YP_798429.1 cytoplasmic protein YP_798430.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_798431.1 cytoplasmic protein YP_798432.1 cytoplasmic protein YP_798433.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex YP_798434.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination YP_798435.1 cytoplasmic protein YP_798436.1 cytoplasmic protein YP_798437.1 cytoplasmic protein YP_798438.1 non-cytoplasmic protein YP_798439.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY YP_798440.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_798441.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ YP_798442.1 cytoplasmic protein YP_798443.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_798444.1 cytoplasmic protein YP_798445.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_798446.1 non-cytoplasmic protein YP_798447.1 cytoplasmic protein YP_798448.1 cytoplasmic protein YP_798449.1 cytoplasmic protein YP_798450.1 cytoplasmic protein YP_798451.1 cytoplasmic protein YP_798452.1 cytoplasmic protein YP_798453.1 cytoplasmic protein YP_798454.1 cytoplasmic protein YP_798455.1 cytoplasmic protein YP_798456.1 cytoplasmic protein YP_798457.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_798458.1 cytoplasmic protein YP_798459.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits YP_798460.1 cytoplasmic protein YP_798461.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_798462.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers YP_798463.1 cytoplasmic protein YP_798464.1 non-cytoplasmic protein YP_798465.1 cytoplasmic protein YP_798466.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide YP_798467.1 cytoplasmic protein YP_798468.1 cytoplasmic protein YP_798469.1 inner membrane protein YP_798470.1 cytoplasmic protein YP_798471.1 inner membrane protein YP_798472.1 cytoplasmic protein YP_798473.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_798474.1 cytoplasmic protein YP_798475.1 non-cytoplasmic protein YP_798476.1 outer membrane protein YP_798477.1 non-cytoplasmic protein YP_798478.1 cytoplasmic protein YP_798479.1 non-cytoplasmic protein YP_798480.1 cytoplasmic protein YP_798481.1 cytoplasmic protein YP_798482.1 inner membrane protein YP_798483.1 inner membrane protein YP_798484.1 outer membrane protein YP_798485.1 cytoplasmic protein YP_798486.1 inner membrane protein YP_798487.1 inner membrane protein YP_798488.1 periplasmic protein YP_798489.1 cytoplasmic protein YP_798490.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine YP_798491.1 cytoplasmic protein YP_798492.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF YP_798493.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane YP_798494.1 non-cytoplasmic protein YP_798495.1 non-cytoplasmic protein YP_798496.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_798497.1 inner membrane protein YP_798498.1 cytoplasmic protein YP_798499.1 cytoplasmic protein YP_798500.1 periplasmic protein YP_798501.1 inner membrane protein YP_798502.1 inner membrane protein YP_798503.1 inner membrane protein YP_798504.1 non-cytoplasmic protein YP_798505.1 inner membrane protein YP_798506.1 cytoplasmic protein YP_798507.1 cytoplasmic protein YP_798508.1 cytoplasmic protein YP_798509.1 non-cytoplasmic protein YP_798510.1 inner membrane protein YP_798511.1 cytoplasmic protein YP_798512.1 cytoplasmic protein YP_798513.1 cytoplasmic protein YP_798514.1 inner membrane protein YP_798515.1 cytoplasmic protein YP_798516.1 cytoplasmic protein YP_798517.1 cytoplasmic protein YP_798518.1 cytoplasmic protein YP_798519.1 cytoplasmic protein YP_798520.1 cytoplasmic protein YP_798521.1 cytoplasmic protein YP_798522.1 inner membrane protein YP_798523.1 cytoplasmic protein YP_798524.1 cytoplasmic protein YP_798525.1 cytoplasmic protein YP_798526.1 cytoplasmic protein YP_798527.1 cytoplasmic protein YP_798528.1 cytoplasmic protein YP_798529.1 non-cytoplasmic protein YP_798530.1 non-cytoplasmic protein YP_798531.1 cytoplasmic protein YP_798532.1 non-cytoplasmic protein YP_798533.1 cytoplasmic protein YP_798534.1 cytoplasmic protein YP_798535.1 cytoplasmic protein YP_798536.1 cytoplasmic protein YP_798537.1 cytoplasmic protein YP_798538.1 cytoplasmic protein YP_798539.1 non-cytoplasmic protein YP_798540.1 cytoplasmic protein YP_798541.1 cytoplasmic protein YP_798542.1 non-cytoplasmic protein YP_798543.1 cytoplasmic protein YP_798544.1 cytoplasmic protein YP_798545.1 cytoplasmic protein YP_798546.1 non-cytoplasmic protein YP_798547.1 cytoplasmic protein YP_798548.1 periplasmic protein YP_798549.1 cytoplasmic protein YP_798550.1 cytoplasmic protein YP_798551.1 cytoplasmic protein YP_798552.1 cytoplasmic protein YP_798553.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_798554.1 cytoplasmic protein YP_798555.1 cytoplasmic protein YP_798556.1 cytoplasmic protein YP_798557.1 cytoplasmic protein YP_798558.1 inner membrane protein YP_798559.1 cytoplasmic protein YP_798560.1 non-cytoplasmic protein YP_798561.1 inner membrane protein YP_798562.1 cytoplasmic protein YP_798563.1 cytoplasmic protein YP_798564.1 inner membrane protein YP_798565.1 inner membrane protein YP_798566.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_798567.1 cytoplasmic protein YP_798568.1 cytoplasmic protein YP_798569.1 cytoplasmic protein YP_798570.1 cytoplasmic protein YP_798571.1 cytoplasmic protein YP_798572.1 cytoplasmic protein YP_798573.1 cytoplasmic protein YP_798574.1 cytoplasmic protein YP_798575.1 periplasmic protein YP_798576.1 cytoplasmic protein YP_798577.1 cytoplasmic protein YP_798578.1 non-cytoplasmic protein YP_798579.1 cytoplasmic protein YP_798580.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) YP_798581.1 cytoplasmic protein YP_798582.1 cytoplasmic protein YP_798583.1 outer membrane protein YP_798584.1 non-cytoplasmic protein YP_798585.1 cytoplasmic protein YP_798586.1 cytoplasmic protein YP_798587.1 crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown YP_798588.1 inner membrane protein YP_798589.1 inner membrane protein YP_798590.1 non-cytoplasmic protein YP_798591.1 cytoplasmic protein YP_798592.1 cytoplasmic protein YP_798593.1 cytoplasmic protein YP_798594.1 cytoplasmic protein YP_798595.1 cytoplasmic protein YP_798596.1 cytoplasmic protein YP_798597.1 cytoplasmic protein YP_798598.1 cytoplasmic protein YP_798599.1 cytoplasmic protein YP_798600.1 non-cytoplasmic protein YP_798601.1 non-cytoplasmic protein YP_798602.1 non-cytoplasmic protein YP_798603.1 inner membrane protein YP_798604.1 cytoplasmic protein YP_798605.1 cytoplasmic protein YP_798606.1 inner membrane protein YP_798607.1 cytoplasmic protein YP_798608.1 non-cytoplasmic protein YP_798609.1 cytoplasmic protein YP_798610.1 cytoplasmic protein YP_798611.1 cytoplasmic protein YP_798612.1 inner membrane protein YP_798613.1 non-cytoplasmic protein YP_798614.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance YP_798615.1 non-cytoplasmic protein YP_798616.1 cytoplasmic protein YP_798617.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphat YP_798618.1 cytoplasmic protein YP_798619.1 cytoplasmic protein YP_798620.1 cytoplasmic protein YP_798621.1 the hook connects flagellar basal body to the flagellar filament YP_798622.1 periplasmic protein YP_798623.1 outer membrane protein YP_798624.1 cytoplasmic protein YP_798625.1 cytoplasmic protein YP_798626.1 cytoplasmic protein YP_798627.1 non-cytoplasmic protein YP_798628.1 non-cytoplasmic protein YP_798629.1 cytoplasmic protein YP_798630.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity YP_798631.1 inner membrane protein YP_798632.1 cytoplasmic protein YP_798633.1 cytoplasmic protein YP_798634.1 cytoplasmic protein YP_798635.1 cytoplasmic protein YP_798636.1 inner membrane protein YP_798637.1 cytoplasmic protein YP_798638.1 cytoplasmic protein YP_798639.1 inner membrane protein YP_798640.1 cytoplasmic protein YP_798641.1 cytoplasmic protein YP_798642.1 cytoplasmic protein YP_798643.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_798644.1 periplasmic protein YP_798645.1 non-cytoplasmic protein YP_798646.1 cytoplasmic protein YP_798647.1 inner membrane protein YP_798648.1 cytoplasmic protein YP_798649.1 inner membrane protein YP_798650.1 cytoplasmic protein YP_798652.1 cytoplasmic protein YP_798653.1 cytoplasmic protein YP_798654.1 periplasmic protein YP_798655.1 cytoplasmic protein YP_798656.1 inner membrane protein YP_798657.1 cytoplasmic protein YP_798658.1 cytoplasmic protein YP_798659.1 cytoplasmic protein YP_798660.1 non-cytoplasmic protein YP_798661.1 cytoplasmic protein YP_798662.1 cytoplasmic protein YP_798663.1 non-cytoplasmic protein YP_798664.1 cytoplasmic protein YP_798665.1 cytoplasmic protein YP_798666.1 cytoplasmic protein YP_798667.1 cytoplasmic protein YP_798668.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis YP_798669.1 cytoplasmic protein YP_798670.1 catalyzes the interconversion of tetrahydrodipicolinate and L,L-diaminopimelate in lysine biosynthesis YP_798671.1 cytoplasmic protein YP_798672.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_798673.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome YP_798674.1 cytoplasmic protein YP_798675.1 inner membrane protein YP_798676.1 cytoplasmic protein YP_798678.1 inner membrane protein YP_798679.1 inner membrane protein YP_798680.1 cytoplasmic protein YP_798681.1 inner membrane protein YP_798682.1 non-cytoplasmic protein YP_798683.1 non-cytoplasmic protein YP_798684.1 non-cytoplasmic protein YP_798685.1 non-cytoplasmic protein YP_798686.1 inner membrane protein YP_798687.1 inner membrane protein YP_798688.1 inner membrane protein YP_798689.1 non-cytoplasmic protein YP_798690.1 cytoplasmic protein YP_798691.1 cytoplasmic protein YP_798692.1 contains N-terminal domain of unknown function fused to transcription elongation factor; GreA is necessary for efficient RNA polymerization through arresting sites; cleaves the nascent transcript and allows resumption of transcription elongation YP_798693.1 periplasmic protein YP_798694.1 periplasmic protein YP_798695.1 inner membrane protein YP_798696.1 non-cytoplasmic protein YP_798697.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_798698.1 cytoplasmic protein YP_798699.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_798700.1 cytoplasmic protein YP_798701.1 inner membrane protein YP_798702.1 inner membrane protein YP_798703.1 cytoplasmic protein YP_798704.1 non-cytoplasmic protein YP_798705.1 non-cytoplasmic protein YP_798706.1 cytoplasmic protein YP_798707.1 cytoplasmic protein YP_798708.1 inner membrane protein YP_798709.1 cytoplasmic protein YP_798710.1 non-cytoplasmic protein YP_798711.1 cytoplasmic protein YP_798712.1 cytoplasmic protein YP_798713.1 cytoplasmic protein YP_798714.1 cytoplasmic protein YP_798715.1 cytoplasmic protein YP_798716.1 inner membrane protein YP_798717.1 cytoplasmic protein YP_798718.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin YP_798719.1 cytoplasmic protein YP_798720.1 inner membrane protein YP_798721.1 cytoplasmic protein YP_798722.1 cytoplasmic protein YP_798723.1 cytoplasmic protein YP_798724.1 cytoplasmic protein YP_798726.1 inner membrane protein YP_798727.1 cytoplasmic protein YP_798728.1 cytoplasmic protein YP_798729.1 non-cytoplasmic protein YP_798730.1 cytoplasmic protein YP_798731.1 non-cytoplasmic protein YP_798732.1 cytoplasmic protein YP_798733.1 cytoplasmic protein YP_798735.1 cytoplasmic protein YP_798736.1 cytoplasmic protein YP_798737.1 cytoplasmic protein YP_798738.1 cytoplasmic protein YP_798739.1 cytoplasmic protein YP_798740.1 non-cytoplasmic protein YP_798741.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis YP_798742.1 cytoplasmic protein YP_798743.1 cytoplasmic protein YP_798744.1 cytoplasmic protein YP_798745.1 cytoplasmic protein YP_798746.1 non-cytoplasmic protein YP_798747.1 cytoplasmic protein YP_798748.1 non-cytoplasmic protein YP_798749.1 cytoplasmic protein YP_798750.1 inner membrane protein YP_798751.1 inner membrane protein YP_798752.1 cytoplasmic protein YP_798753.1 involved in flagellin assembly YP_798754.1 inner membrane protein YP_798755.1 non-cytoplasmic protein YP_798756.1 cytoplasmic protein YP_798757.1 non-cytoplasmic protein YP_798758.1 cytoplasmic protein YP_798759.1 cytoplasmic protein YP_798760.1 non-cytoplasmic protein YP_798761.1 cytoplasmic protein YP_798763.1 cytoplasmic protein YP_798764.1 cytoplasmic protein YP_798765.1 cytoplasmic protein YP_798766.1 inner membrane protein YP_798767.1 periplasmic protein YP_798768.1 cytoplasmic protein YP_798769.1 cytoplasmic protein YP_798770.1 cytoplasmic protein YP_798771.1 cytoplasmic protein YP_798772.1 cytoplasmic protein YP_798773.1 non-cytoplasmic protein YP_798774.1 cytoplasmic protein YP_798775.1 cytoplasmic protein YP_798776.1 cytoplasmic protein YP_798777.1 inner membrane protein YP_798778.1 cytoplasmic protein YP_798779.1 cytoplasmic protein YP_798780.1 non-cytoplasmic protein YP_798781.1 non-cytoplasmic protein YP_798782.1 non-cytoplasmic protein YP_798783.1 outer membrane protein YP_798784.1 cytoplasmic protein YP_798785.1 cytoplasmic protein YP_798786.1 cytoplasmic protein YP_798787.1 cytoplasmic protein YP_798788.1 non-cytoplasmic protein YP_798789.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family YP_798790.1 cytoplasmic protein YP_798791.1 inner membrane protein YP_798792.1 cytoplasmic protein YP_798793.1 cytoplasmic protein YP_798794.1 cytoplasmic protein YP_798795.1 cytoplasmic protein YP_798796.1 inner membrane protein YP_798797.1 cytoplasmic protein YP_798798.1 cytoplasmic protein YP_798799.1 non-cytoplasmic protein YP_798800.1 inner membrane protein YP_798801.1 non-cytoplasmic protein YP_798802.1 cytoplasmic protein YP_798803.1 cytoplasmic protein YP_798804.1 inner membrane protein YP_798805.1 cytoplasmic protein YP_798806.1 non-cytoplasmic protein YP_798807.1 cytoplasmic protein YP_798808.1 non-cytoplasmic protein YP_798809.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_798810.1 outer membrane protein YP_798811.1 non-cytoplasmic protein YP_798812.1 cytoplasmic protein YP_798813.1 cytoplasmic protein YP_798814.1 inner membrane protein YP_798815.1 cytoplasmic protein YP_798816.1 non-cytoplasmic protein YP_798817.1 outer membrane protein YP_798818.1 non-cytoplasmic protein YP_798819.1 non-cytoplasmic protein YP_798820.1 non-cytoplasmic protein YP_798821.1 inner membrane protein YP_798822.1 non-cytoplasmic protein YP_798823.1 non-cytoplasmic protein YP_798824.1 cytoplasmic protein YP_798825.1 cytoplasmic protein YP_798826.1 cytoplasmic protein YP_798827.1 cytoplasmic protein YP_798828.1 cytoplasmic protein YP_798829.1 cytoplasmic protein YP_798830.1 cytoplasmic protein YP_798831.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress YP_798832.1 cytoplasmic protein YP_798833.1 cytoplasmic protein YP_798834.1 cytoplasmic protein YP_798835.1 cytoplasmic protein YP_798836.1 inner membrane protein YP_798837.1 inner membrane protein YP_798838.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation. YP_798839.1 non-cytoplasmic protein YP_798840.1 non-cytoplasmic protein YP_798841.1 non-cytoplasmic protein YP_798842.1 non-cytoplasmic protein YP_798843.1 cytoplasmic protein YP_798844.1 cytoplasmic protein YP_798845.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain YP_798846.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis YP_798847.1 cytoplasmic protein YP_798848.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1 YP_798849.1 non-cytoplasmic protein YP_798850.1 catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP YP_798851.1 cytoplasmic protein YP_798852.1 cytoplasmic protein YP_798853.1 non-cytoplasmic protein YP_798854.1 cytoplasmic protein YP_798855.1 cytoplasmic protein YP_798856.1 non-cytoplasmic protein YP_798857.1 inner membrane protein YP_798858.1 cytoplasmic protein YP_798859.1 cytoplasmic protein YP_798860.1 cytoplasmic protein YP_798861.1 inner membrane protein YP_798862.1 cytoplasmic protein YP_798863.1 inner membrane protein YP_798864.1 inner membrane protein YP_798865.1 inner membrane protein YP_798866.1 inner membrane protein YP_798867.1 inner membrane protein YP_798868.1 inner membrane protein YP_798869.1 cytoplasmic protein YP_798870.1 cytoplasmic protein YP_798871.1 cytoplasmic protein YP_798872.1 cytoplasmic protein YP_798873.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_798874.1 inner membrane protein YP_798875.1 non-cytoplasmic protein YP_798876.1 cytoplasmic protein YP_798877.1 cytoplasmic protein YP_798878.1 inner membrane protein YP_798879.1 cytoplasmic protein YP_798880.1 cytoplasmic protein YP_798881.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP YP_798882.1 cytoplasmic protein YP_798883.1 cytoplasmic protein YP_798884.1 cytoplasmic protein YP_798885.1 inner membrane protein YP_798886.1 non-cytoplasmic protein YP_798887.1 cytoplasmic protein YP_798888.1 cytoplasmic protein YP_798889.1 cytoplasmic protein YP_798890.1 cytoplasmic protein YP_798891.1 cytoplasmic protein YP_798892.1 non-cytoplasmic protein YP_798893.1 cytoplasmic protein YP_798894.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_798895.1 inner membrane protein YP_798896.1 inner membrane protein YP_798897.1 periplasmic protein YP_798899.1 cytoplasmic protein YP_798900.1 inner membrane protein YP_798901.1 non-cytoplasmic protein YP_798902.1 non-cytoplasmic protein YP_798903.1 cytoplasmic protein YP_798904.1 cytoplasmic protein YP_798905.1 cytoplasmic protein YP_798906.1 cytoplasmic protein YP_798907.1 cytoplasmic protein YP_798908.1 cytoplasmic protein YP_798909.1 inner membrane protein YP_798910.1 non-cytoplasmic protein YP_798911.1 non-cytoplasmic protein YP_798912.1 inner membrane protein YP_798913.1 cytoplasmic protein YP_798914.1 cytoplasmic protein YP_798915.1 non-cytoplasmic protein YP_798916.1 cytoplasmic protein YP_798917.1 cytoplasmic protein YP_798918.1 cytoplasmic protein YP_798919.1 cytoplasmic protein YP_798920.1 cytoplasmic protein YP_798921.1 inner membrane protein YP_798922.1 cytoplasmic protein YP_798923.1 cytoplasmic protein YP_798924.1 inner membrane protein YP_798925.1 cytoplasmic protein YP_798926.1 cytoplasmic protein YP_798927.1 non-cytoplasmic protein YP_798928.1 cytoplasmic protein YP_798929.1 cytoplasmic protein YP_798930.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion YP_798931.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria YP_798932.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor YP_798933.1 cytoplasmic protein YP_798934.1 non-cytoplasmic protein YP_798935.1 non-cytoplasmic protein YP_798936.1 cytoplasmic protein YP_798937.1 inner membrane protein YP_798938.1 cytoplasmic protein YP_798939.1 cytoplasmic protein YP_798940.1 cytoplasmic protein YP_798941.1 cytoplasmic protein YP_798942.1 cytoplasmic protein YP_798943.1 cytoplasmic protein YP_798944.1 cytoplasmic protein YP_798945.1 cytoplasmic protein YP_798946.1 inner membrane protein YP_798947.1 inner membrane protein YP_798948.1 cytoplasmic protein YP_798949.1 inner membrane protein YP_798950.1 cytoplasmic protein YP_798951.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis YP_798952.1 cytoplasmic protein YP_798953.1 non-cytoplasmic protein YP_798954.1 non-cytoplasmic protein YP_798955.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine YP_798956.1 cytoplasmic protein YP_798957.1 cytoplasmic protein YP_798958.1 catalyzes branch migration in Holliday junction intermediates YP_798959.1 non-cytoplasmic protein YP_798960.1 cytoplasmic protein YP_798961.1 cytoplasmic protein YP_798962.1 cytoplasmic protein YP_798963.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate YP_798964.1 non-cytoplasmic protein YP_798965.1 inner membrane protein YP_798966.1 decarboxylates 4-phosphopantothenoylcysteine to form 4'-phosphopantotheine. YP_798967.1 cytoplasmic protein YP_798968.1 cytoplasmic protein YP_798969.1 cytoplasmic protein YP_798970.1 cytoplasmic protein YP_798971.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis YP_798972.1 cytoplasmic protein YP_798973.1 cytoplasmic protein YP_798974.1 inner membrane protein YP_798975.1 catalyzes the formation of decaprenylphosphoryl-5-phosphoribose from phosphoribose diphosphate and decaprenyl phosphate YP_798976.1 inner membrane protein YP_798977.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_798978.1 non-cytoplasmic protein YP_798979.1 cytoplasmic protein YP_798980.1 cytoplasmic protein YP_798981.1 cytoplasmic protein YP_798982.1 cytoplasmic protein YP_798983.1 cytoplasmic protein YP_798984.1 cytoplasmic protein YP_798985.1 cytoplasmic protein YP_798986.1 inner membrane protein YP_798987.1 cytoplasmic protein YP_798988.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source YP_798989.1 cytoplasmic protein YP_798990.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_798991.1 cytoplasmic protein YP_798992.1 cytoplasmic protein YP_798993.1 cytoplasmic protein YP_798994.1 cytoplasmic protein YP_798995.1 non-cytoplasmic protein YP_798996.1 cytoplasmic protein YP_798997.1 cytoplasmic protein YP_798998.1 cytoplasmic protein YP_798999.1 cytoplasmic protein YP_799000.1 inner membrane protein YP_799001.1 cytoplasmic protein YP_799002.1 cytoplasmic protein YP_799003.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_799004.1 cytoplasmic protein YP_799005.1 cytoplasmic protein YP_799006.1 non-cytoplasmic protein YP_799007.1 cytoplasmic protein YP_799008.1 cytoplasmic protein YP_799009.1 cytoplasmic protein YP_799010.1 non-cytoplasmic protein YP_799011.1 cytoplasmic protein YP_799012.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS YP_799013.1 periplasmic protein YP_799014.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine YP_799015.1 inner membrane protein YP_799016.1 non-cytoplasmic protein YP_799017.1 cytoplasmic protein YP_799018.1 cytoplasmic protein YP_799019.1 inner membrane protein YP_799020.1 cytoplasmic protein YP_799021.1 cytoplasmic protein YP_799022.1 inner membrane protein YP_799023.1 cytoplasmic protein YP_799024.1 non-cytoplasmic protein YP_799025.1 non-cytoplasmic protein YP_799026.1 cytoplasmic protein YP_799027.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate YP_799028.1 non-cytoplasmic protein YP_799029.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate YP_799030.1 non-cytoplasmic protein YP_799031.1 outer membrane protein YP_799032.1 non-cytoplasmic protein YP_799033.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function YP_799034.1 cytoplasmic protein YP_799035.1 non-cytoplasmic protein YP_799036.1 periplasmic protein YP_799037.1 inner membrane protein YP_799038.1 non-cytoplasmic protein YP_799039.1 non-cytoplasmic protein YP_799040.1 non-cytoplasmic protein YP_799041.1 cytoplasmic protein YP_799042.1 inner membrane protein YP_799043.1 inner membrane protein YP_799044.1 cytoplasmic protein YP_799045.1 cytoplasmic protein YP_799046.1 cytoplasmic protein YP_799047.1 cytoplasmic protein YP_799048.1 crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown YP_799049.1 cytoplasmic protein YP_799050.1 non-cytoplasmic protein YP_799051.1 inner membrane protein YP_799052.1 cytoplasmic protein YP_799053.1 non-cytoplasmic protein YP_799054.1 cytoplasmic protein YP_799055.1 non-cytoplasmic protein YP_799056.1 outer membrane protein YP_799057.1 cytoplasmic protein YP_799058.1 cytoplasmic protein YP_799059.1 cytoplasmic protein YP_799060.1 cytoplasmic protein YP_799061.1 inner membrane protein YP_799062.1 inner membrane protein YP_799063.1 cytoplasmic protein YP_799064.1 inner membrane protein YP_799065.1 cytoplasmic protein YP_799066.1 cytoplasmic protein YP_799067.1 cytoplasmic protein YP_799068.1 cytoplasmic protein YP_799069.1 non-cytoplasmic protein YP_799070.1 cytoplasmic protein YP_799071.1 cytoplasmic protein YP_799072.1 inner membrane protein YP_799073.1 non-cytoplasmic protein YP_799074.1 inner membrane protein YP_799075.1 non-cytoplasmic protein YP_799076.1 cytoplasmic protein YP_799077.1 cytoplasmic protein YP_799078.1 cytoplasmic protein YP_799079.1 cytoplasmic protein YP_799080.1 cytoplasmic protein YP_799081.1 inner membrane protein YP_799082.1 outer membrane protein YP_799083.1 inner membrane protein YP_799084.1 cytoplasmic protein YP_799085.1 cytoplasmic protein YP_799086.1 cytoplasmic protein YP_799087.1 inner membrane protein YP_799088.1 cytoplasmic protein YP_799089.1 cytoplasmic protein YP_799090.1 cytoplasmic protein YP_799091.1 outer membrane protein YP_799092.1 cytoplasmic protein YP_799093.1 cytoplasmic protein YP_799094.1 cytoplasmic protein YP_799095.1 cytoplasmic protein YP_799096.1 inner membrane protein YP_799097.1 non-cytoplasmic protein YP_799098.1 catalyzes the formation of 2-dehydropantoate from (R)-pantoate YP_799099.1 inner membrane protein YP_799100.1 inner membrane protein YP_799101.1 cytoplasmic protein YP_799102.1 cytoplasmic protein YP_799103.1 cytoplasmic protein YP_799104.1 non-cytoplasmic protein YP_799105.1 outer membrane protein YP_799106.1 inner membrane protein YP_799107.1 cytoplasmic protein YP_799108.1 cytoplasmic protein YP_799109.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily YP_799110.1 cytoplasmic protein YP_799111.1 cytoplasmic protein YP_799112.1 cytoplasmic protein YP_799113.1 cytoplasmic protein YP_799114.1 inner membrane protein YP_799115.1 cytoplasmic protein YP_799116.1 non-cytoplasmic protein YP_799117.1 non-cytoplasmic protein YP_799118.1 cytoplasmic protein YP_799119.1 inner membrane protein YP_799120.1 cytoplasmic protein YP_799121.1 cytoplasmic protein YP_799122.1 inner membrane protein YP_799123.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era YP_799124.1 cytoplasmic protein YP_799125.1 cytoplasmic protein YP_799126.1 non-cytoplasmic protein YP_799127.1 Converts isocitrate to alpha ketoglutarate YP_799128.1 cytoplasmic protein YP_799129.1 cytoplasmic protein YP_799130.1 outer membrane protein YP_799131.1 inner membrane protein YP_799132.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_799133.1 cytoplasmic protein YP_799134.1 non-cytoplasmic protein YP_799135.1 cytoplasmic protein YP_799136.1 non-cytoplasmic protein YP_799137.1 non-cytoplasmic protein YP_799138.1 cytoplasmic protein YP_799139.1 non-cytoplasmic protein YP_799140.1 cytoplasmic protein YP_799141.1 cytoplasmic protein YP_799142.1 cytoplasmic protein YP_799143.1 cytoplasmic protein YP_799144.1 cytoplasmic protein YP_799145.1 inner membrane protein YP_799146.1 cytoplasmic protein YP_799147.1 inner membrane protein YP_799148.1 inner membrane protein YP_799149.1 cytoplasmic protein YP_799150.1 non-cytoplasmic protein YP_799151.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate YP_799152.1 inner membrane protein YP_799153.1 inner membrane protein YP_799154.1 non-cytoplasmic protein YP_799155.1 cytoplasmic protein YP_799156.1 cytoplasmic protein YP_799157.1 cytoplasmic protein YP_799158.1 cytoplasmic protein YP_799159.1 cytoplasmic protein YP_799160.1 cytoplasmic protein YP_799161.1 cytoplasmic protein YP_799162.1 inner membrane protein YP_799163.1 inner membrane protein YP_799164.1 cytoplasmic protein YP_799165.1 cytoplasmic protein YP_799166.1 cytoplasmic protein YP_799167.1 cytoplasmic protein YP_799168.1 cytoplasmic protein YP_799169.1 cytoplasmic protein YP_799170.1 cytoplasmic protein YP_799171.1 cytoplasmic protein YP_799172.1 cytoplasmic protein YP_799173.1 cytoplasmic protein YP_799174.1 cytoplasmic protein YP_799175.1 cytoplasmic protein YP_799176.1 non-cytoplasmic protein YP_799177.1 cytoplasmic protein YP_799178.1 cytoplasmic protein YP_799179.1 cytoplasmic protein YP_799180.1 cytoplasmic protein YP_799181.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle YP_799182.1 cytoplasmic protein YP_799183.1 cytoplasmic protein YP_799184.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE YP_799185.1 cytoplasmic protein YP_799186.1 inner membrane protein YP_799187.1 cytoplasmic protein YP_799188.1 in Escherichia coli transcription of this gene is enhanced by polyamines YP_799189.1 cytoplasmic protein YP_799190.1 cytoplasmic protein YP_799191.1 cytoplasmic protein YP_799192.1 cytoplasmic protein YP_799193.1 cytoplasmic protein YP_799194.1 cytoplasmic protein YP_799195.1 cytoplasmic protein YP_799196.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_799197.1 cytoplasmic protein YP_799198.1 cytoplasmic protein YP_799199.1 cytoplasmic protein YP_799200.1 inner membrane protein YP_799201.1 cytoplasmic protein YP_799202.1 cytoplasmic protein YP_799203.1 cytoplasmic protein YP_799204.1 cytoplasmic protein YP_799205.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential YP_799206.1 cytoplasmic protein YP_799207.1 cytoplasmic protein YP_799208.1 cytoplasmic protein YP_799209.1 cytoplasmic protein YP_799210.1 inner membrane protein YP_799211.1 cytoplasmic protein YP_799212.1 cytoplasmic protein YP_799213.1 non-cytoplasmic protein YP_799214.1 non-cytoplasmic protein YP_799216.1 cytoplasmic protein YP_799217.1 cytoplasmic protein YP_799218.1 cytoplasmic protein YP_799219.1 cytoplasmic protein YP_799220.1 non-cytoplasmic protein YP_799221.1 non-cytoplasmic protein YP_799222.1 cytoplasmic protein YP_799223.1 cytoplasmic protein YP_799224.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_799225.1 cytoplasmic protein YP_799226.1 inner membrane protein YP_799227.1 cytoplasmic protein YP_799228.1 cytoplasmic protein YP_799229.1 cytoplasmic protein YP_799230.1 cytoplasmic protein YP_799231.1 cytoplasmic protein YP_799232.1 cytoplasmic protein YP_799233.1 cytoplasmic protein YP_799234.1 cytoplasmic protein YP_799235.1 non-cytoplasmic protein YP_799236.1 inner membrane protein YP_799237.1 inner membrane protein YP_799238.1 cytoplasmic protein YP_799239.1 inner membrane protein YP_799240.1 inner membrane protein YP_799241.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_799242.1 cytoplasmic protein YP_799243.1 outer membrane protein YP_799244.1 cytoplasmic protein YP_799245.1 cytoplasmic protein YP_799246.1 cytoplasmic protein YP_799247.1 cytoplasmic protein YP_799248.1 cytoplasmic protein YP_799249.1 non-cytoplasmic protein YP_799250.1 cytoplasmic protein YP_799251.1 inner membrane protein YP_799252.1 non-cytoplasmic protein YP_799253.1 inner membrane protein YP_799254.1 inner membrane protein YP_799255.1 inner membrane protein YP_799256.1 non-cytoplasmic protein YP_799257.1 inner membrane protein YP_799258.1 non-cytoplasmic protein YP_799259.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis YP_799260.1 cytoplasmic protein YP_799261.1 cytoplasmic protein YP_799262.1 cytoplasmic protein YP_799263.1 cytoplasmic protein YP_799264.1 inner membrane protein YP_799265.1 cytoplasmic protein YP_799266.1 cytoplasmic protein YP_799267.1 cytoplasmic protein YP_799268.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate YP_799269.1 cytoplasmic protein YP_799270.1 cytoplasmic protein YP_799271.1 cytoplasmic protein YP_799272.1 cytoplasmic protein YP_799273.1 non-cytoplasmic protein YP_799274.1 non-cytoplasmic protein YP_799275.1 cytoplasmic protein YP_799276.1 cytoplasmic protein YP_799277.1 cytoplasmic protein YP_799278.1 cytoplasmic protein YP_799279.1 outer membrane protein YP_799280.1 cytoplasmic protein YP_799281.1 outer membrane protein YP_799282.1 cytoplasmic protein YP_799284.1 cytoplasmic protein YP_799285.1 cytoplasmic protein YP_799286.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_799287.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway YP_799288.1 inner membrane protein YP_799289.1 cytoplasmic protein YP_799290.1 cytoplasmic protein YP_799291.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_799292.1 inner membrane protein YP_799293.1 cytoplasmic protein YP_799294.1 cytoplasmic protein YP_799295.1 outer membrane protein YP_799296.1 cytoplasmic protein YP_799297.1 cytoplasmic protein YP_799298.1 cytoplasmic protein YP_799299.1 cytoplasmic protein YP_799300.1 cytoplasmic protein YP_799301.1 inner membrane protein YP_799302.1 cytoplasmic protein YP_799303.1 cytoplasmic protein YP_799304.1 cytoplasmic protein YP_799305.1 cytoplasmic protein YP_799306.1 cytoplasmic protein YP_799307.1 cytoplasmic protein YP_799308.1 cytoplasmic protein YP_799309.1 cytoplasmic protein YP_799310.1 cytoplasmic protein YP_799311.1 inner membrane protein YP_799312.1 non-cytoplasmic protein YP_799313.1 inner membrane protein YP_799314.1 cytoplasmic protein YP_799315.1 cytoplasmic protein YP_799316.1 non-cytoplasmic protein YP_799317.1 inner membrane protein YP_799318.1 inner membrane protein YP_799319.1 non-cytoplasmic protein YP_799320.1 outer membrane protein YP_799321.1 molecular chaperone YP_799322.1 non-cytoplasmic protein YP_799323.1 inner membrane protein YP_799324.1 non-cytoplasmic protein YP_799325.1 cytoplasmic protein YP_799326.1 cytoplasmic protein YP_799327.1 cytoplasmic protein YP_799328.1 cytoplasmic protein YP_799329.1 inner membrane protein YP_799330.1 non-cytoplasmic protein YP_799331.1 cytoplasmic protein YP_799332.1 periplasmic protein YP_799333.1 cytoplasmic protein YP_799334.1 inner membrane protein YP_799335.1 cytoplasmic protein YP_799336.1 cytoplasmic protein YP_799337.1 inner membrane protein YP_799338.1 non-cytoplasmic protein YP_799339.1 inner membrane protein YP_799340.1 cytoplasmic protein YP_799341.1 cytoplasmic protein YP_799342.1 cytoplasmic protein YP_799343.1 inner membrane protein YP_799344.1 inner membrane protein YP_799345.1 non-cytoplasmic protein YP_799346.1 non-cytoplasmic protein YP_799347.1 inner membrane protein YP_799348.1 cytoplasmic protein YP_799349.1 cytoplasmic protein YP_799350.1 cytoplasmic protein YP_799351.1 cytoplasmic protein YP_799352.1 non-cytoplasmic protein YP_799353.1 non-cytoplasmic protein YP_799354.1 cytoplasmic protein YP_799355.1 cytoplasmic protein YP_799356.1 cytoplasmic protein YP_799357.1 cytoplasmic protein YP_799358.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine YP_799359.1 related to ferredoxin oxidoreductase; cytoplasmic protein YP_799360.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity YP_799361.1 cytoplasmic protein YP_799362.1 outer membrane protein YP_799363.1 catalyzes the formation of fructose 1,6-bisphosphate from fructose 6-phosphate and diphosphate YP_799364.1 cytoplasmic protein YP_799365.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate YP_799366.1 cytoplasmic protein YP_799367.1 cytoplasmic protein YP_799368.1 cytoplasmic protein YP_799369.1 inner membrane protein YP_799370.1 cytoplasmic protein YP_799371.1 cytoplasmic protein YP_799372.1 cytoplasmic protein YP_799373.1 cytoplasmic protein YP_799374.1 cytoplasmic protein YP_799375.1 cytoplasmic protein YP_799376.1 inner membrane protein YP_799377.1 inner membrane protein YP_799378.1 non-cytoplasmic protein YP_799379.1 non-cytoplasmic protein YP_799380.1 non-cytoplasmic protein YP_799381.1 cytoplasmic protein YP_799382.1 cytoplasmic protein YP_799383.1 non-cytoplasmic protein YP_799384.1 cytoplasmic protein YP_799385.1 non-cytoplasmic protein YP_799386.1 inner membrane protein YP_799387.1 inner membrane protein YP_799388.1 cytoplasmic protein YP_799389.1 outer membrane protein YP_799390.1 cytoplasmic protein YP_799391.1 non-cytoplasmic protein YP_799392.1 non-cytoplasmic protein YP_799393.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins YP_799394.1 MDM; functions in conversion of succinate to propionate YP_799395.1 cytoplasmic protein YP_799396.1 inner membrane protein YP_799397.1 inner membrane protein YP_799398.1 cytoplasmic protein YP_799399.1 cytoplasmic protein YP_799400.1 cytoplasmic protein YP_799401.1 inner membrane protein YP_799402.1 inner membrane protein YP_799403.1 cytoplasmic protein YP_799404.1 cytoplasmic protein YP_799405.1 cytoplasmic protein YP_799406.1 cytoplasmic protein YP_799407.1 inner membrane protein YP_799408.1 periplasmic protein YP_799409.1 cytoplasmic protein YP_799410.1 non-cytoplasmic protein YP_799411.1 inner membrane protein YP_799412.1 cytoplasmic protein YP_799413.1 inner membrane protein YP_799414.1 inner membrane protein YP_799415.1 inner membrane protein YP_799416.1 cytoplasmic protein YP_799417.1 inner membrane protein YP_799418.1 cytoplasmic protein YP_799419.1 inner membrane protein YP_799420.1 outer membrane protein YP_799421.1 cytoplasmic protein YP_799422.1 non-cytoplasmic protein YP_799423.1 non-cytoplasmic protein YP_799424.1 non-cytoplasmic protein YP_799425.1 non-cytoplasmic protein YP_799426.1 outer membrane protein YP_799427.1 inner membrane protein YP_799428.1 cytoplasmic protein YP_799429.1 inner membrane protein YP_799430.1 inner membrane protein YP_799431.1 non-cytoplasmic protein YP_799432.1 non-cytoplasmic protein YP_799433.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis YP_799434.1 putative metalloprotease YP_799435.1 inner membrane protein YP_799436.1 cytoplasmic protein YP_799437.1 inner membrane protein YP_799438.1 cytoplasmic protein YP_799439.1 cytoplasmic protein YP_799440.1 cytoplasmic protein YP_799441.1 cytoplasmic protein YP_799442.1 cytoplasmic protein YP_799443.1 Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A YP_799444.1 cytoplasmic protein YP_799445.1 cytoplasmic protein YP_799446.1 cytoplasmic protein YP_799447.1 cytoplasmic protein YP_799448.1 cytoplasmic protein YP_799449.1 cytoplasmic protein YP_799450.1 cytoplasmic protein YP_799451.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid YP_799452.1 cytoplasmic protein YP_799453.1 cytoplasmic protein YP_799454.1 cytoplasmic protein YP_799455.1 CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group YP_799456.1 cytoplasmic protein YP_799457.1 non-cytoplasmic protein YP_799458.1 cytoplasmic protein YP_799459.1 cytoplasmic protein YP_799460.1 cytoplasmic protein YP_799461.1 non-cytoplasmic protein YP_799462.1 cytoplasmic protein YP_799463.1 cytoplasmic protein YP_799464.1 cytoplasmic protein YP_799465.1 cytoplasmic protein YP_799466.1 non-cytoplasmic protein YP_799467.1 cytoplasmic protein YP_799468.1 non-cytoplasmic protein YP_799469.1 inner membrane protein YP_799470.1 cytoplasmic protein YP_799471.1 inner membrane protein YP_799472.1 inner membrane protein YP_799473.1 inner membrane protein YP_799474.1 cytoplasmic protein YP_799475.1 cytoplasmic protein YP_799476.1 cytoplasmic protein YP_799477.1 cytoplasmic protein YP_799478.1 cytoplasmic protein YP_799479.1 cytoplasmic protein YP_799480.1 non-cytoplasmic protein YP_799481.1 cytoplasmic protein YP_799482.1 cytoplasmic protein YP_799483.1 inner membrane protein YP_799484.1 cytoplasmic protein YP_799485.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine YP_799486.1 cytoplasmic protein YP_799487.1 Decarboxylation of S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine YP_799488.1 cytoplasmic protein YP_799489.1 cytoplasmic protein YP_799490.1 cytoplasmic protein YP_799491.1 cytoplasmic protein YP_799492.1 cytoplasmic protein YP_799493.1 inner membrane protein YP_799494.1 cytoplasmic protein YP_799495.1 cytoplasmic protein YP_799496.1 Catalyzes the conversion of citrate to isocitrate YP_799497.1 outer membrane protein YP_799498.1 cytoplasmic protein YP_799499.1 cytoplasmic protein YP_799500.1 cytoplasmic protein YP_799501.1 cytoplasmic protein YP_799502.1 cytoplasmic protein YP_799503.1 cytoplasmic protein YP_799504.1 cytoplasmic protein YP_799505.1 inner membrane protein YP_799506.1 cytoplasmic protein YP_799507.1 cytoplasmic protein YP_799508.1 cytoplasmic protein YP_799509.1 catalyzes the formation of aspartate semialdehyde from aspartyl phosphate YP_799510.1 non-cytoplasmic protein YP_799511.1 inner membrane protein YP_799512.1 inner membrane protein YP_799513.1 cytoplasmic protein YP_799514.1 cytoplasmic protein YP_799515.1 inner membrane protein YP_799516.1 cytoplasmic protein YP_799517.1 cytoplasmic protein