-- dump date 20140619_131524 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_001789042.1 171056693 6160507 72..1604 1 NC_010524.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1604 dnaA 6160507 dnaA Leptothrix cholodnii SP-6 chromosomal replication initiation protein YP_001789042.1 72 D 395495 CDS YP_001789043.1 171056694 6161734 1718..2863 1 NC_010524.1 KEGG: mpt:Mpe_A0002 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; DNA polymerase III subunit beta 2863 6161734 Lcho_0002 Leptothrix cholodnii SP-6 DNA polymerase III subunit beta YP_001789043.1 1718 D 395495 CDS YP_001789044.1 171056695 6161735 2965..5559 1 NC_010524.1 KEGG: mpt:Mpe_A0003 DNA topoisomerase (ATP-hydrolyzing); TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B 5559 6161735 Lcho_0003 Leptothrix cholodnii SP-6 DNA gyrase subunit B YP_001789044.1 2965 D 395495 CDS YP_001789045.1 171056696 6161736 5756..6268 1 NC_010524.1 KEGG: pna:Pnap_1125 hypothetical protein; hypothetical protein 6268 6161736 Lcho_0004 Leptothrix cholodnii SP-6 hypothetical protein YP_001789045.1 5756 D 395495 CDS YP_001789046.1 171056697 6160264 complement(6287..7186) 1 NC_010524.1 PFAM: regulatory protein LysR; KEGG: pna:Pnap_3443 transcriptional regulator, LysR family; LysR family transcriptional regulator 7186 6160264 Lcho_0005 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001789046.1 6287 R 395495 CDS YP_001789047.1 171056698 6160265 complement(7230..7544) 1 NC_010524.1 KEGG: ajs:Ajs_2095 hypothetical protein; hypothetical protein 7544 6160265 Lcho_0006 Leptothrix cholodnii SP-6 hypothetical protein YP_001789047.1 7230 R 395495 CDS YP_001789048.1 171056699 6160266 complement(7594..8796) 1 NC_010524.1 KEGG: pna:Pnap_0166 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; putative PAS/PAC sensor protein 8796 6160266 Lcho_0007 Leptothrix cholodnii SP-6 putative PAS/PAC sensor protein YP_001789048.1 7594 R 395495 CDS YP_001789049.1 171056700 6160267 8901..10451 1 NC_010524.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: eba:ebA2890 hypothetical protein; peptidoglycan-binding domain-containing protein 10451 6160267 Lcho_0008 Leptothrix cholodnii SP-6 peptidoglycan-binding domain-containing protein YP_001789049.1 8901 D 395495 CDS YP_001789050.1 171056701 6160268 10501..11118 1 NC_010524.1 PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: eba:ebA2889 hypothetical protein; hypothetical protein 11118 6160268 Lcho_0009 Leptothrix cholodnii SP-6 hypothetical protein YP_001789050.1 10501 D 395495 CDS YP_001789051.1 171056702 6160269 complement(11180..11866) 1 NC_010524.1 KEGG: pol:Bpro_2657 hypothetical protein; hypothetical protein 11866 6160269 Lcho_0010 Leptothrix cholodnii SP-6 hypothetical protein YP_001789051.1 11180 R 395495 CDS YP_001789052.1 171056703 6160071 complement(11932..12906) 1 NC_010524.1 PFAM: Mammalian cell entry related domain protein; KEGG: aav:Aave_1818 mammalian cell entry related domain protein; hypothetical protein 12906 6160071 Lcho_0011 Leptothrix cholodnii SP-6 hypothetical protein YP_001789052.1 11932 R 395495 CDS YP_001789053.1 171056704 6160072 complement(12912..13661) 1 NC_010524.1 KEGG: pol:Bpro_2659 ABC-type transport system ipermease component; ABC transporter permease 13661 6160072 Lcho_0012 Leptothrix cholodnii SP-6 ABC transporter permease YP_001789053.1 12912 R 395495 CDS YP_001789054.1 171056705 6160073 complement(13710..14801) 1 NC_010524.1 PFAM: protein of unknown function UPF0118; KEGG: rfr:Rfer_2147 protein of unknown function UPF0118; hypothetical protein 14801 6160073 Lcho_0013 Leptothrix cholodnii SP-6 hypothetical protein YP_001789054.1 13710 R 395495 CDS YP_001789055.1 171056706 6160074 complement(14798..15178) 1 NC_010524.1 KEGG: ajs:Ajs_0603 MazG nucleotide pyrophosphohydrolase; MazG nucleotide pyrophosphohydrolase 15178 6160074 Lcho_0014 Leptothrix cholodnii SP-6 MazG nucleotide pyrophosphohydrolase YP_001789055.1 14798 R 395495 CDS YP_001789056.1 171056707 6160075 complement(15175..16038) 1 NC_010524.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: cvi:CV_0045 probable oxidoreductase iron/ascorbate family; 2OG-Fe(II) oxygenase 16038 6160075 Lcho_0015 Leptothrix cholodnii SP-6 2OG-Fe(II) oxygenase YP_001789056.1 15175 R 395495 CDS YP_001789057.1 171056708 6160076 16419..19187 1 NC_010524.1 PFAM: polysaccharide deacetylase; KEGG: ajs:Ajs_0773 polysaccharide deacetylase; polysaccharide deacetylase 19187 6160076 Lcho_0016 Leptothrix cholodnii SP-6 polysaccharide deacetylase YP_001789057.1 16419 D 395495 CDS YP_001789058.1 171056709 6159935 19153..22902 1 NC_010524.1 KEGG: ajs:Ajs_0772 tetratricopeptide TPR_2 repeat protein; hypothetical protein 22902 6159935 Lcho_0017 Leptothrix cholodnii SP-6 hypothetical protein YP_001789058.1 19153 D 395495 CDS YP_001789059.1 171056710 6159936 22955..23473 1 NC_010524.1 KEGG: rso:RSc2274 putative lipoprotein; putative lipoprotein 23473 6159936 Lcho_0018 Leptothrix cholodnii SP-6 putative lipoprotein YP_001789059.1 22955 D 395495 CDS YP_001789060.1 171056711 6159937 23470..24855 1 NC_010524.1 KEGG: bxe:Bxe_A2972 putative transmembrane protein; putative transmembrane protein 24855 6159937 Lcho_0019 Leptothrix cholodnii SP-6 putative transmembrane protein YP_001789060.1 23470 D 395495 CDS YP_001789061.1 171056712 6159938 24852..25925 1 NC_010524.1 KEGG: abo:ABO_0894 hypothetical protein; hypothetical protein 25925 6159938 Lcho_0020 Leptothrix cholodnii SP-6 hypothetical protein YP_001789061.1 24852 D 395495 CDS YP_001789062.1 171056713 6159939 25922..27445 1 NC_010524.1 PFAM: glycosyl transferase group 1; KEGG: reh:H16_B2199 lipopolysaccharide N-acetylglucosaminyl transferase; group 1 glycosyl transferase 27445 6159939 Lcho_0021 Leptothrix cholodnii SP-6 group 1 glycosyl transferase YP_001789062.1 25922 D 395495 CDS YP_001789063.1 171056714 6159940 27524..28894 1 NC_010524.1 KEGG: rme:Rmet_4161 putative transmembrane protein; putative transmembrane protein 28894 6159940 Lcho_0022 Leptothrix cholodnii SP-6 putative transmembrane protein YP_001789063.1 27524 D 395495 CDS YP_001789064.1 171056715 6159813 28902..29813 1 NC_010524.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: rso:RS01781 hypothetical protein; coenzyme F420-dependent NADP oxidoreductase 29813 6159813 Lcho_0023 Leptothrix cholodnii SP-6 coenzyme F420-dependent NADP oxidoreductase YP_001789064.1 28902 D 395495 CDS YP_001789065.1 171056716 6159814 complement(29798..30430) 1 NC_010524.1 KEGG: mpt:Mpe_A0049 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 30430 6159814 Lcho_0024 Leptothrix cholodnii SP-6 DNA polymerase III subunit epsilon YP_001789065.1 29798 R 395495 CDS YP_001789066.1 171056717 6159815 complement(30457..31902) 1 NC_010524.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: rxy:Rxyl_0136 transcriptional regulator, GntR family; transcriptional regulator 31902 6159815 Lcho_0025 Leptothrix cholodnii SP-6 transcriptional regulator YP_001789066.1 30457 R 395495 CDS YP_001789067.1 171056718 6159816 31970..32434 1 NC_010524.1 PFAM: OsmC family protein; KEGG: rfr:Rfer_3388 OsmC-like protein; OsmC family protein 32434 6159816 Lcho_0026 Leptothrix cholodnii SP-6 OsmC family protein YP_001789067.1 31970 D 395495 CDS YP_001789068.1 171056719 6159817 32460..33089 1 NC_010524.1 PFAM: Negative transcriptional regulator; KEGG: rfr:Rfer_3387 negative transcriptional regulator; FMN-binding negative transcriptional regulator 33089 6159817 Lcho_0027 Leptothrix cholodnii SP-6 FMN-binding negative transcriptional regulator YP_001789068.1 32460 D 395495 CDS YP_001789069.1 171056720 6159818 33103..33546 1 NC_010524.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bmu:Bmul_4135 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 33546 6159818 Lcho_0028 Leptothrix cholodnii SP-6 N-acetyltransferase GCN5 YP_001789069.1 33103 D 395495 CDS YP_001789070.1 171056721 6159825 complement(33574..33855) 1 NC_010524.1 PFAM: protein of unknown function DUF427; KEGG: mpt:Mpe_A1381 hypothetical protein; hypothetical protein 33855 6159825 Lcho_0029 Leptothrix cholodnii SP-6 hypothetical protein YP_001789070.1 33574 R 395495 CDS YP_001789071.1 171056722 6159826 complement(33897..35243) 1 NC_010524.1 PFAM: protein of unknown function DUF323; KEGG: mpt:Mpe_A1379 hypothetical protein; hypothetical protein 35243 6159826 Lcho_0030 Leptothrix cholodnii SP-6 hypothetical protein YP_001789071.1 33897 R 395495 CDS YP_001789072.1 171056723 6159827 complement(35295..36716) 1 NC_010524.1 KEGG: mpt:Mpe_A1056 periplasmic protein/biopolymer transport; hypothetical protein 36716 6159827 Lcho_0031 Leptothrix cholodnii SP-6 hypothetical protein YP_001789072.1 35295 R 395495 CDS YP_001789073.1 171056724 6159828 36993..37784 1 NC_010524.1 TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; Septum formation inhibitor MinC domain protein; KEGG: mpt:Mpe_A3345 putative septum site-determining protein; septum site-determining protein MinC 37784 6159828 Lcho_0032 Leptothrix cholodnii SP-6 septum site-determining protein MinC YP_001789073.1 36993 D 395495 CDS YP_001789074.1 171056725 6159829 37836..38654 1 NC_010524.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ajs:Ajs_0066 septum site-determining protein MinD; septum site-determining protein MinD 38654 6159829 Lcho_0033 Leptothrix cholodnii SP-6 septum site-determining protein MinD YP_001789074.1 37836 D 395495 CDS YP_001789075.1 171056726 6159830 38659..38922 1 NC_010524.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 38922 6159830 Lcho_0034 Leptothrix cholodnii SP-6 cell division topological specificity factor MinE YP_001789075.1 38659 D 395495 CDS YP_001789076.1 171056727 6160129 39093..39410 1 NC_010524.1 hypothetical protein 39410 6160129 Lcho_0035 Leptothrix cholodnii SP-6 hypothetical protein YP_001789076.1 39093 D 395495 CDS YP_001789077.1 171056728 6160130 39642..40580 1 NC_010524.1 PFAM: pyruvate carboxyltransferase; KEGG: pol:Bpro_2353 pyruvate carboxyltransferase; pyruvate carboxyltransferase 40580 6160130 Lcho_0036 Leptothrix cholodnii SP-6 pyruvate carboxyltransferase YP_001789077.1 39642 D 395495 CDS YP_001789078.1 171056729 6160131 40584..41813 1 NC_010524.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pol:Bpro_2352 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 41813 6160131 Lcho_0037 Leptothrix cholodnii SP-6 L-carnitine dehydratase/bile acid-inducible protein F YP_001789078.1 40584 D 395495 CDS YP_001789079.1 171056730 6160132 41903..42886 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_2351 uncharacterized protein UPF0065; hypothetical protein 42886 6160132 Lcho_0038 Leptothrix cholodnii SP-6 hypothetical protein YP_001789079.1 41903 D 395495 CDS YP_001789080.1 171056731 6160134 complement(44116..45387) 1 NC_010524.1 KEGG: pna:Pnap_0797 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 45387 6160134 Lcho_0040 Leptothrix cholodnii SP-6 acetyl-CoA acetyltransferase YP_001789080.1 44116 R 395495 CDS YP_001789081.1 171056732 6160065 complement(45695..46909) 1 NC_010524.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 46909 6160065 Lcho_0041 Leptothrix cholodnii SP-6 6-phosphofructokinase YP_001789081.1 45695 R 395495 CDS YP_001789082.1 171056733 6160066 complement(47049..47597) 1 NC_010524.1 PFAM: Lipocalin family protein; KEGG: tbd:Tbd_1196 outer membrane lipoprotein; lipocalin family protein 47597 6160066 Lcho_0042 Leptothrix cholodnii SP-6 lipocalin family protein YP_001789082.1 47049 R 395495 CDS YP_001789083.1 171056734 6160067 47734..49365 1 NC_010524.1 PFAM: transcriptional regulator domain protein; KEGG: jan:Jann_3721 transcriptional regulatory protein-like; transcriptional regulator domain-containing protein 49365 6160067 Lcho_0043 Leptothrix cholodnii SP-6 transcriptional regulator domain-containing protein YP_001789083.1 47734 D 395495 CDS YP_001789084.1 171056735 6160068 49496..49888 1 NC_010524.1 hypothetical protein 49888 6160068 Lcho_0044 Leptothrix cholodnii SP-6 hypothetical protein YP_001789084.1 49496 D 395495 CDS YP_001789085.1 171056736 6160069 complement(49890..51038) 1 NC_010524.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; KEGG: rpb:RPB_0891 adenylate/guanylate cyclase; adenylate/guanylate cyclase 51038 6160069 Lcho_0045 Leptothrix cholodnii SP-6 adenylate/guanylate cyclase YP_001789085.1 49890 R 395495 CDS YP_001789086.1 171056737 6160070 complement(51035..51412) 1 NC_010524.1 PFAM: response regulator receiver; KEGG: xau:Xaut_3859 response regulator receiver protein; response regulator receiver protein 51412 6160070 Lcho_0046 Leptothrix cholodnii SP-6 response regulator receiver protein YP_001789086.1 51035 R 395495 CDS YP_001789087.1 171056738 6159819 complement(51409..52935) 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cau:Caur_0402 histidine kinase; histidine kinase 52935 6159819 Lcho_0047 Leptothrix cholodnii SP-6 histidine kinase YP_001789087.1 51409 R 395495 CDS YP_001789088.1 171056739 6159820 complement(52932..53558) 1 NC_010524.1 PFAM: electron transport protein SCO1/SenC; KEGG: scl:sce2899 SCO1/SenC family lipoprotein; electron transport protein SCO1/SenC 53558 6159820 Lcho_0048 Leptothrix cholodnii SP-6 electron transport protein SCO1/SenC YP_001789088.1 52932 R 395495 CDS YP_001789089.1 171056740 6159821 complement(53567..54580) 1 NC_010524.1 KEGG: gdi:GDI2643 putative nitrate transport protein NrtA; putative nitrate transport protein NrtA 54580 6159821 Lcho_0049 Leptothrix cholodnii SP-6 putative nitrate transport protein NrtA YP_001789089.1 53567 R 395495 CDS YP_001789090.1 171056741 6159822 complement(54594..55736) 1 NC_010524.1 PFAM: alpha/beta hydrolase fold; KEGG: rha:RHA1_ro10186 hypothetical protein; alpha/beta hydrolase fold protein 55736 6159822 Lcho_0050 Leptothrix cholodnii SP-6 alpha/beta hydrolase fold protein YP_001789090.1 54594 R 395495 CDS YP_001789091.1 171056742 6159823 complement(55774..56934) 1 NC_010524.1 KEGG: sus:Acid_4622 homoserine O-acetyltransferase; homoserine O-acetyltransferase 56934 6159823 Lcho_0051 Leptothrix cholodnii SP-6 homoserine O-acetyltransferase YP_001789091.1 55774 R 395495 CDS YP_001789092.1 171056743 6159824 57209..57577 1 NC_010524.1 PFAM: globin; KEGG: ade:Adeh_1754 globin like protein; globin 57577 6159824 Lcho_0052 Leptothrix cholodnii SP-6 globin YP_001789092.1 57209 D 395495 CDS YP_001789093.1 171056744 6160000 57758..58564 1 NC_010524.1 KEGG: scl:sce8365 hypothetical protein; hypothetical protein 58564 6160000 Lcho_0053 Leptothrix cholodnii SP-6 hypothetical protein YP_001789093.1 57758 D 395495 CDS YP_001789094.1 171056745 6160001 complement(58623..59270) 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; KEGG: rru:Rru_A3213 PAS/PAC sensor signal transduction histidine kinase; histidine kinase 59270 6160001 Lcho_0054 Leptothrix cholodnii SP-6 histidine kinase YP_001789094.1 58623 R 395495 CDS YP_001789095.1 171056746 6160002 complement(59309..61462) 1 NC_010524.1 PFAM: GAF domain protein; histidine kinase HAMP region domain protein; KEGG: bja:blr2862 two-component hybrid sensor and regulator; sensor protein 61462 6160002 Lcho_0055 Leptothrix cholodnii SP-6 sensor protein YP_001789095.1 59309 R 395495 CDS YP_001789096.1 171056747 6160003 complement(61499..61963) 1 NC_010524.1 KEGG: rle:pRL110111 hypothetical protein; hypothetical protein 61963 6160003 Lcho_0056 Leptothrix cholodnii SP-6 hypothetical protein YP_001789096.1 61499 R 395495 CDS YP_001789097.1 171056748 6160004 62156..62470 1 NC_010524.1 KEGG: mpt:Mpe_A3139 hypothetical protein; hypothetical protein 62470 6160004 Lcho_0057 Leptothrix cholodnii SP-6 hypothetical protein YP_001789097.1 62156 D 395495 CDS YP_001789098.1 171056749 6160005 62524..62937 1 NC_010524.1 KEGG: mpt:Mpe_A2525 hypothetical protein; hypothetical protein 62937 6160005 Lcho_0058 Leptothrix cholodnii SP-6 hypothetical protein YP_001789098.1 62524 D 395495 CDS YP_001789099.1 171056750 6160283 complement(63036..64025) 1 NC_010524.1 PFAM: metallophosphoesterase; KEGG: rfr:Rfer_3683 metallophosphoesterase; metallophosphoesterase 64025 6160283 Lcho_0059 Leptothrix cholodnii SP-6 metallophosphoesterase YP_001789099.1 63036 R 395495 CDS YP_001789100.1 171056751 6160284 complement(64025..65026) 1 NC_010524.1 PFAM: luciferase family protein; KEGG: bmu:Bmul_2136 luciferase family protein; luciferase family protein 65026 6160284 Lcho_0060 Leptothrix cholodnii SP-6 luciferase family protein YP_001789100.1 64025 R 395495 CDS YP_001789101.1 171056752 6160285 complement(65087..66136) 1 NC_010524.1 KEGG: mgm:Mmc1_3719 hypothetical protein; thioredoxin-like protein 66136 6160285 Lcho_0061 Leptothrix cholodnii SP-6 thioredoxin-like protein YP_001789101.1 65087 R 395495 CDS YP_001789102.1 171056753 6160286 complement(66202..66423) 1 NC_010524.1 PFAM: SlyX family protein; KEGG: bbr:BB1266 hypothetical protein; SlyX family protein 66423 6160286 Lcho_0062 Leptothrix cholodnii SP-6 SlyX family protein YP_001789102.1 66202 R 395495 CDS YP_001789103.1 171056754 6160287 complement(66471..67256) 1 NC_010524.1 KEGG: bja:bll2732 putative cytochrome c; putative cytochrome c 67256 6160287 Lcho_0063 Leptothrix cholodnii SP-6 putative cytochrome c YP_001789103.1 66471 R 395495 CDS YP_001789104.1 171056755 6160288 complement(67253..67573) 1 NC_010524.1 PFAM: Sulphur oxidation protein SoxZ; KEGG: bja:bll2733 probable sulfur oxidation protein; sulfur oxidation protein SoxZ 67573 6160288 Lcho_0064 Leptothrix cholodnii SP-6 sulfur oxidation protein SoxZ YP_001789104.1 67253 R 395495 CDS YP_001789105.1 171056756 6160172 complement(67600..68076) 1 NC_010524.1 with SoxZ catalyzes the oxidation of sulfur compounds; sulfur oxidation protein SoxY 68076 6160172 Lcho_0065 Leptothrix cholodnii SP-6 sulfur oxidation protein SoxY YP_001789105.1 67600 R 395495 CDS YP_001789106.1 171056757 6160173 complement(68084..68527) 1 NC_010524.1 KEGG: bbt:BBta_2764 putative cytochrome c, putative SoxX protein; putative cytochrome c SoxX protein 68527 6160173 Lcho_0066 Leptothrix cholodnii SP-6 putative cytochrome c SoxX protein YP_001789106.1 68084 R 395495 CDS YP_001789107.1 171056758 6160174 complement(68548..70818) 1 NC_010524.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bja:bll2736 putative aldehyde dehydrogenase protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein 70818 6160174 Lcho_0067 Leptothrix cholodnii SP-6 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein YP_001789107.1 68548 R 395495 CDS YP_001789108.1 171056759 6160175 complement(70815..71318) 1 NC_010524.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: smd:Smed_6324 (2Fe-2S)-binding domain protein; 2Fe-2S iron-sulfur cluster-binding domain-containing protein 71318 6160175 Lcho_0068 Leptothrix cholodnii SP-6 2Fe-2S iron-sulfur cluster-binding domain-containing protein YP_001789108.1 70815 R 395495 CDS YP_001789109.1 171056760 6160176 72214..74025 1 NC_010524.1 PFAM: multicopper oxidase type 2; KEGG: mgr:MGG_08046 hypothetical protein; bilirubin oxidase 74025 6160176 Lcho_0069 Leptothrix cholodnii SP-6 bilirubin oxidase YP_001789109.1 72214 D 395495 CDS YP_001789110.1 171056761 6160177 74058..74654 1 NC_010524.1 involved in biogenesis of respiratory and photosynthetic systems; KEGG: ppf:Pput_2533 electron transport protein SCO1/SenC; hypothetical protein 74654 6160177 Lcho_0070 Leptothrix cholodnii SP-6 hypothetical protein YP_001789110.1 74058 D 395495 CDS YP_001789111.1 171056762 6160295 complement(74662..75261) 1 NC_010524.1 PFAM: Chromate transporter; KEGG: rfr:Rfer_2757 chromate transporter; chromate transporter 75261 6160295 Lcho_0071 Leptothrix cholodnii SP-6 chromate transporter YP_001789111.1 74662 R 395495 CDS YP_001789112.1 171056763 6160296 complement(75258..75959) 1 NC_010524.1 PFAM: Chromate transporter; KEGG: vei:Veis_3786 chromate transporter; chromate transporter 75959 6160296 Lcho_0072 Leptothrix cholodnii SP-6 chromate transporter YP_001789112.1 75258 R 395495 CDS YP_001789113.1 171056764 6160297 complement(76003..76926) 1 NC_010524.1 PFAM: Acyl transferase; KEGG: dac:Daci_1762 (acyl-carrier protein) S-malonyltransferase; acyl transferase 76926 6160297 Lcho_0073 Leptothrix cholodnii SP-6 acyl transferase YP_001789113.1 76003 R 395495 CDS YP_001789114.1 171056765 6160298 complement(76985..77872) 1 NC_010524.1 KEGG: mpt:Mpe_A2891 triphosphoribosyl-dephospho-CoA synthase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; PFAM: triphosphoribosyl-dephospho-CoA protein; triphosphoribosyl-dephospho-CoA synthase MdcB 77872 6160298 Lcho_0074 Leptothrix cholodnii SP-6 triphosphoribosyl-dephospho-CoA synthase MdcB YP_001789114.1 76985 R 395495 CDS YP_001789115.1 171056766 6160299 complement(77869..78630) 1 NC_010524.1 KEGG: dac:Daci_1764 holo-ACP synthase, malonate decarboxylase-specific; malonate decarboxylase-specific holo-ACP synthase 78630 6160299 Lcho_0075 Leptothrix cholodnii SP-6 malonate decarboxylase-specific holo-ACP synthase YP_001789115.1 77869 R 395495 CDS YP_001789116.1 171056767 6160300 complement(78637..79338) 1 NC_010524.1 TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: dac:Daci_1765 malonate decarboxylase, gamma subunit; malonate decarboxylase subunit gamma 79338 6160300 Lcho_0076 Leptothrix cholodnii SP-6 malonate decarboxylase subunit gamma YP_001789116.1 78637 R 395495 CDS YP_001789117.1 171056768 6159725 complement(79341..80243) 1 NC_010524.1 The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A; malonate decarboxylase subunit beta 80243 6159725 Lcho_0077 Leptothrix cholodnii SP-6 malonate decarboxylase subunit beta YP_001789117.1 79341 R 395495 CDS YP_001789118.1 171056769 6159726 complement(80240..80578) 1 NC_010524.1 TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase delta subunit; KEGG: dac:Daci_1767 malonate decarboxylase acyl carrier protein; malonate decarboxylase acyl carrier protein 80578 6159726 Lcho_0078 Leptothrix cholodnii SP-6 malonate decarboxylase acyl carrier protein YP_001789118.1 80240 R 395495 CDS YP_001789119.1 171056770 6159727 complement(80583..82283) 1 NC_010524.1 TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: mpt:Mpe_A2895 alpha subunit of malonate decarboxylase; malonate decarboxylase subunit alpha 82283 6159727 Lcho_0079 Leptothrix cholodnii SP-6 malonate decarboxylase subunit alpha YP_001789119.1 80583 R 395495 CDS YP_001789120.1 171056771 6159728 complement(82296..83327) 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A2898 hypothetical protein; hypothetical protein 83327 6159728 Lcho_0080 Leptothrix cholodnii SP-6 hypothetical protein YP_001789120.1 82296 R 395495 CDS YP_001789121.1 171056772 6159729 83480..84202 1 NC_010524.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mpt:Mpe_A2899 putative GntR-family transcription regulator; GntR family transcriptional regulator 84202 6159729 Lcho_0081 Leptothrix cholodnii SP-6 GntR family transcriptional regulator YP_001789121.1 83480 D 395495 CDS YP_001789122.1 171056773 6159730 84204..85490 1 NC_010524.1 PFAM: aminotransferase class I and II; KEGG: pol:Bpro_1410 aminotransferase; aminotransferase 85490 6159730 Lcho_0082 Leptothrix cholodnii SP-6 aminotransferase YP_001789122.1 84204 D 395495 CDS YP_001789123.1 171056774 6160349 complement(85554..86225) 1 NC_010524.1 PFAM: DSBA oxidoreductase; KEGG: mpt:Mpe_A0744 2-hydroxychromene-2-carboxylate isomerase family protein; DSBA oxidoreductase 86225 6160349 Lcho_0083 Leptothrix cholodnii SP-6 DSBA oxidoreductase YP_001789123.1 85554 R 395495 CDS YP_001789124.1 171056775 6160350 86507..87097 1 NC_010524.1 KEGG: aav:Aave_3831 restriction endonuclease; restriction endonuclease 87097 6160350 Lcho_0084 Leptothrix cholodnii SP-6 restriction endonuclease YP_001789124.1 86507 D 395495 CDS YP_001789125.1 171056776 6160351 complement(87210..88604) 1 NC_010524.1 SMART: tyrosine protein kinase; serine/threonine protein kinase; leucine-rich repeat-containing protein typical subtype; KEGG: pfo:Pfl_3676 serine/threonine protein kinase; serine/threonine protein kinase 88604 6160351 Lcho_0085 Leptothrix cholodnii SP-6 serine/threonine protein kinase YP_001789125.1 87210 R 395495 CDS YP_001789126.1 171056777 6160352 complement(88612..89895) 1 NC_010524.1 KEGG: pol:Bpro_0661 D-serine deaminase; D-serine deaminase 89895 6160352 Lcho_0086 Leptothrix cholodnii SP-6 D-serine deaminase YP_001789126.1 88612 R 395495 CDS YP_001789127.1 171056778 6160353 90047..92119 1 NC_010524.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pna:Pnap_0620 GAF modulated sigma54 specific transcriptional regulator, fis family; Fis family GAF modulated sigma54 specific transcriptional regulator 92119 6160353 Lcho_0087 Leptothrix cholodnii SP-6 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001789127.1 90047 D 395495 CDS YP_001789128.1 171056779 6160354 92178..92639 1 NC_010524.1 PFAM: Rhodanese domain protein; KEGG: mgm:Mmc1_2517 rhodanese domain protein; rhodanese domain-containing protein 92639 6160354 Lcho_0088 Leptothrix cholodnii SP-6 rhodanese domain-containing protein YP_001789128.1 92178 D 395495 CDS YP_001789129.1 171056780 6161015 92887..94695 1 NC_010524.1 KEGG: pna:Pnap_0619 putative flavoprotein involved in K+ transport; putative potassium transport flavoprotein 94695 6161015 Lcho_0089 Leptothrix cholodnii SP-6 putative potassium transport flavoprotein YP_001789129.1 92887 D 395495 CDS YP_001789130.1 171056781 6161016 complement(94738..95370) 1 NC_010524.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: pol:Bpro_1051 flavin reductase-like, FMN-binding; flavin reductase domain-containing protein 95370 6161016 Lcho_0090 Leptothrix cholodnii SP-6 flavin reductase domain-containing protein YP_001789130.1 94738 R 395495 CDS YP_001789131.1 171056782 6161017 95507..96154 1 NC_010524.1 PFAM: DTW domain containing protein; KEGG: mms:mma_1862 hypothetical protein; DTW domain-containing protein 96154 6161017 Lcho_0091 Leptothrix cholodnii SP-6 DTW domain-containing protein YP_001789131.1 95507 D 395495 CDS YP_001789132.1 171056783 6161018 complement(96129..96875) 1 NC_010524.1 PFAM: dienelactone hydrolase; KEGG: ter:Tery_0392 carboxymethylenebutenolidase; carboxymethylenebutenolidase 96875 6161018 Lcho_0092 Leptothrix cholodnii SP-6 carboxymethylenebutenolidase YP_001789132.1 96129 R 395495 CDS YP_001789133.1 171056784 6161019 complement(96911..97954) 1 NC_010524.1 PFAM: aldo/keto reductase; KEGG: bmu:Bmul_3074 aldo/keto reductase; aldo/keto reductase 97954 6161019 Lcho_0093 Leptothrix cholodnii SP-6 aldo/keto reductase YP_001789133.1 96911 R 395495 CDS YP_001789134.1 171056785 6161020 98264..98836 1 NC_010524.1 PFAM: protein of unknown function UPF0016; KEGG: mpt:Mpe_A0366 putative transmembrane protein; hypothetical protein 98836 6161020 Lcho_0094 Leptothrix cholodnii SP-6 hypothetical protein YP_001789134.1 98264 D 395495 CDS YP_001789135.1 171056786 6161763 complement(98859..100721) 1 NC_010524.1 TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: mpt:Mpe_A0560 glucosamine--fructose-6-phosphate aminotransferase (isomerizing); glucosamine--fructose-6-phosphate aminotransferase 100721 6161763 Lcho_0095 Leptothrix cholodnii SP-6 glucosamine--fructose-6-phosphate aminotransferase YP_001789135.1 98859 R 395495 CDS YP_001789136.1 171056787 6161764 100889..101395 1 NC_010524.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: pol:Bpro_0674 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 101395 6161764 Lcho_0096 Leptothrix cholodnii SP-6 AsnC family transcriptional regulator YP_001789136.1 100889 D 395495 CDS YP_001789137.1 171056788 6161765 complement(101370..101852) 1 NC_010524.1 PFAM: heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein 101852 6161765 Lcho_0097 Leptothrix cholodnii SP-6 heat shock protein DnaJ domain-containing protein YP_001789137.1 101370 R 395495 CDS YP_001789138.1 171056789 6161766 complement(101859..103268) 1 NC_010524.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: mpt:Mpe_A0557 UDP-N-acetylglucosamine diphosphorylase; UDP-N-acetylglucosamine pyrophosphorylase 103268 6161766 Lcho_0098 Leptothrix cholodnii SP-6 UDP-N-acetylglucosamine pyrophosphorylase YP_001789138.1 101859 R 395495 CDS YP_001789139.1 171056790 6161767 103357..104235 1 NC_010524.1 KEGG: mpt:Mpe_A0556 putative lipoprotein; putative lipoprotein 104235 6161767 Lcho_0099 Leptothrix cholodnii SP-6 putative lipoprotein YP_001789139.1 103357 D 395495 CDS YP_001789140.1 171056791 6161768 complement(104204..104854) 1 NC_010524.1 KEGG: mpt:Mpe_A0555 putative lipoprotein; putative lipoprotein 104854 6161768 Lcho_0100 Leptothrix cholodnii SP-6 putative lipoprotein YP_001789140.1 104204 R 395495 CDS YP_001789141.1 171056792 6163516 complement(104905..105885) 1 NC_010524.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 105885 6163516 Lcho_0101 Leptothrix cholodnii SP-6 C32 tRNA thiolase YP_001789141.1 104905 R 395495 CDS YP_001789142.1 171056793 6163517 complement(105882..106280) 1 NC_010524.1 KEGG: reh:H16_A0259 dihydroneopterin aldolase; dihydroneopterin aldolase 106280 6163517 Lcho_0102 Leptothrix cholodnii SP-6 dihydroneopterin aldolase YP_001789142.1 105882 R 395495 CDS YP_001789143.1 171056794 6163518 complement(106331..107143) 1 NC_010524.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mpt:Mpe_A0552 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 107143 6163518 Lcho_0103 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001789143.1 106331 R 395495 CDS YP_001789144.1 171056795 6163519 107261..108475 1 NC_010524.1 PFAM: protein of unknown function DUF185; KEGG: mpt:Mpe_A0551 hypothetical protein; hypothetical protein 108475 6163519 Lcho_0104 Leptothrix cholodnii SP-6 hypothetical protein YP_001789144.1 107261 D 395495 CDS YP_001789145.1 171056796 6163520 108525..108716 1 NC_010524.1 KEGG: ajs:Ajs_0499 hypothetical protein; hypothetical protein 108716 6163520 Lcho_0105 Leptothrix cholodnii SP-6 hypothetical protein YP_001789145.1 108525 D 395495 CDS YP_001789146.1 171056797 6163521 complement(108666..109925) 1 NC_010524.1 PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: mpt:Mpe_A3298 tRNA nucleotidyltransferase; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 109925 6163521 Lcho_0106 Leptothrix cholodnii SP-6 polynucleotide adenylyltransferase/metal dependent phosphohydrolase YP_001789146.1 108666 R 395495 CDS YP_001789147.1 171056798 6162183 complement(109970..110695) 1 NC_010524.1 PFAM: Glutathione S-transferase domain; KEGG: aav:Aave_4206 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 110695 6162183 Lcho_0107 Leptothrix cholodnii SP-6 glutathione S-transferase domain-containing protein YP_001789147.1 109970 R 395495 CDS YP_001789148.1 171056799 6162184 complement(110723..112120) 1 NC_010524.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pfo:Pfl_2004 two component, sigma-54 specific, transcriptional regulator, fis family; two component sigma-54 specific Fis family transcriptional regulator 112120 6162184 Lcho_0108 Leptothrix cholodnii SP-6 two component sigma-54 specific Fis family transcriptional regulator YP_001789148.1 110723 R 395495 CDS YP_001789149.1 171056800 6162185 complement(112164..113549) 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN2417 sensor histidine kinase; histidine kinase 113549 6162185 Lcho_0109 Leptothrix cholodnii SP-6 histidine kinase YP_001789149.1 112164 R 395495 CDS YP_001789150.1 171056801 6162186 complement(113673..114638) 1 NC_010524.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: mpt:Mpe_A3296 nucleoside-diphosphate-sugar epimerase; NADH dehydrogenase 114638 6162186 Lcho_0110 Leptothrix cholodnii SP-6 NADH dehydrogenase YP_001789150.1 113673 R 395495 CDS YP_001789151.1 171056802 6162187 complement(114704..116776) 1 NC_010524.1 PFAM: Lytic transglycosylase catalytic; KEGG: mpt:Mpe_A3295 putative transglycosylase; lytic transglycosylase catalytic subunit 116776 6162187 Lcho_0111 Leptothrix cholodnii SP-6 lytic transglycosylase catalytic subunit YP_001789151.1 114704 R 395495 CDS YP_001789152.1 171056803 6162188 complement(116889..117851) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A3294 LysR family regulatory protein; LysR family transcriptional regulator 117851 6162188 Lcho_0112 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001789152.1 116889 R 395495 CDS YP_001789153.1 171056804 6161882 117947..118411 1 NC_010524.1 hypothetical protein 118411 6161882 Lcho_0113 Leptothrix cholodnii SP-6 hypothetical protein YP_001789153.1 117947 D 395495 CDS YP_001789154.1 171056805 6161883 complement(118240..118644) 1 NC_010524.1 PFAM: TfoX domain protein; KEGG: afw:Anae109_0262 TfoX domain protein; TfoX domain-containing protein 118644 6161883 Lcho_0114 Leptothrix cholodnii SP-6 TfoX domain-containing protein YP_001789154.1 118240 R 395495 CDS YP_001789155.1 171056806 6161884 118764..119354 1 NC_010524.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: mpt:Mpe_A3291 hypothetical protein; 5-formyltetrahydrofolate cyclo-ligase 119354 6161884 Lcho_0115 Leptothrix cholodnii SP-6 5-formyltetrahydrofolate cyclo-ligase YP_001789155.1 118764 D 395495 CDS YP_001789156.1 171056807 6161885 complement(119438..120034) 1 NC_010524.1 PFAM: OmpW family protein; KEGG: dac:Daci_4836 OmpW family protein; OmpW family protein 120034 6161885 Lcho_0116 Leptothrix cholodnii SP-6 OmpW family protein YP_001789156.1 119438 R 395495 CDS YP_001789157.1 171056808 6161886 complement(120284..121123) 1 NC_010524.1 KEGG: aav:Aave_4058 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 121123 6161886 Lcho_0117 Leptothrix cholodnii SP-6 5,10-methylenetetrahydrofolate reductase YP_001789157.1 120284 R 395495 CDS YP_001789158.1 171056809 6161887 complement(121159..122067) 1 NC_010524.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: mpt:Mpe_A3287 putative hemolysin; ribosomal RNA methyltransferase RrmJ/FtsJ 122067 6161887 Lcho_0118 Leptothrix cholodnii SP-6 ribosomal RNA methyltransferase RrmJ/FtsJ YP_001789158.1 121159 R 395495 CDS YP_001789159.1 171056810 6162777 complement(122067..123500) 1 NC_010524.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 123500 6162777 Lcho_0119 Leptothrix cholodnii SP-6 S-adenosyl-L-homocysteine hydrolase YP_001789159.1 122067 R 395495 CDS YP_001789160.1 171056811 6162778 123915..124490 1 NC_010524.1 PFAM: intradiol ring-cleavage dioxygenase; KEGG: pol:Bpro_3458 intradiol ring-cleavage dioxygenase; intradiol ring-cleavage dioxygenase 124490 6162778 Lcho_0120 Leptothrix cholodnii SP-6 intradiol ring-cleavage dioxygenase YP_001789160.1 123915 D 395495 CDS YP_001789161.1 171056812 6162779 124582..125424 1 NC_010524.1 KEGG: mpt:Mpe_A0034 hypothetical protein; hypothetical protein 125424 6162779 Lcho_0121 Leptothrix cholodnii SP-6 hypothetical protein YP_001789161.1 124582 D 395495 CDS YP_001789162.1 171056813 6162780 125496..126713 1 NC_010524.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 126713 purT 6162780 purT Leptothrix cholodnii SP-6 phosphoribosylglycinamide formyltransferase 2 YP_001789162.1 125496 D 395495 CDS YP_001789163.1 171056814 6162781 126766..126960 1 NC_010524.1 hypothetical protein 126960 6162781 Lcho_0123 Leptothrix cholodnii SP-6 hypothetical protein YP_001789163.1 126766 D 395495 CDS YP_001789164.1 171056815 6162782 126976..127782 1 NC_010524.1 KEGG: bpt:Bpet0636 hypothetical protein; hypothetical protein 127782 6162782 Lcho_0124 Leptothrix cholodnii SP-6 hypothetical protein YP_001789164.1 126976 D 395495 CDS YP_001789165.1 171056816 6162706 complement(127798..128880) 1 NC_010524.1 KEGG: rfr:Rfer_4021 hypothetical protein; hypothetical protein 128880 6162706 Lcho_0125 Leptothrix cholodnii SP-6 hypothetical protein YP_001789165.1 127798 R 395495 CDS YP_001789166.1 171056817 6162707 complement(128926..130107) 1 NC_010524.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 130107 6162707 Lcho_0126 Leptothrix cholodnii SP-6 S-adenosylmethionine synthetase YP_001789166.1 128926 R 395495 CDS YP_001789167.1 171056818 6162708 130351..131220 1 NC_010524.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: mpt:Mpe_A3251 putative acyltransferase; lipid A biosynthesis acyltransferase 131220 6162708 Lcho_0127 Leptothrix cholodnii SP-6 lipid A biosynthesis acyltransferase YP_001789167.1 130351 D 395495 CDS YP_001789168.1 171056819 6162709 131217..132101 1 NC_010524.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: mpt:Mpe_A3250 lipid A biosynthesis lauroyl acyltransferase; lipid A biosynthesis acyltransferase 132101 6162709 Lcho_0128 Leptothrix cholodnii SP-6 lipid A biosynthesis acyltransferase YP_001789168.1 131217 D 395495 CDS YP_001789169.1 171056820 6162710 132156..133049 1 NC_010524.1 PFAM: diaminopimelate epimerase; KEGG: pol:Bpro_1058 diaminopimelate epimerase; diaminopimelate epimerase 133049 6162710 Lcho_0129 Leptothrix cholodnii SP-6 diaminopimelate epimerase YP_001789169.1 132156 D 395495 CDS YP_001789170.1 171056821 6162711 133159..133839 1 NC_010524.1 PFAM: protein of unknown function DUF484; KEGG: mpt:Mpe_A3244 hypothetical protein; hypothetical protein 133839 6162711 Lcho_0130 Leptothrix cholodnii SP-6 hypothetical protein YP_001789170.1 133159 D 395495 CDS YP_001789171.1 171056822 6161259 133836..134774 1 NC_010524.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mpt:Mpe_A3243 putative site specific integrase/recombinase protein; integrase family protein 134774 6161259 Lcho_0131 Leptothrix cholodnii SP-6 integrase family protein YP_001789171.1 133836 D 395495 CDS YP_001789172.1 171056823 6161260 complement(134806..136296) 1 NC_010524.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: bpd:BURPS668_0884 xylulokinase; xylulokinase 136296 6161260 Lcho_0132 Leptothrix cholodnii SP-6 xylulokinase YP_001789172.1 134806 R 395495 CDS YP_001789173.1 171056824 6161261 complement(136350..137297) 1 NC_010524.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: vei:Veis_3165 helix-turn-helix-domain containing protein, AraC type; AraC family transcriptional regulator 137297 6161261 Lcho_0133 Leptothrix cholodnii SP-6 AraC family transcriptional regulator YP_001789173.1 136350 R 395495 CDS YP_001789174.1 171056825 6161262 complement(137319..138716) 1 NC_010524.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: vei:Veis_3167 mannitol dehydrogenase, C-terminal domain; mannitol dehydrogenase domain-containing protein 138716 6161262 Lcho_0134 Leptothrix cholodnii SP-6 mannitol dehydrogenase domain-containing protein YP_001789174.1 137319 R 395495 CDS YP_001789175.1 171056826 6161263 complement(138751..139803) 1 NC_010524.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: vei:Veis_3168 ABC transporter related; ABC transporter-like protein 139803 6161263 Lcho_0135 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001789175.1 138751 R 395495 CDS YP_001789176.1 171056827 6161264 complement(139830..140660) 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3169 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 140660 6161264 Lcho_0136 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001789176.1 139830 R 395495 CDS YP_001789177.1 171056828 6162938 complement(140669..141541) 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3170 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 141541 6162938 Lcho_0137 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001789177.1 140669 R 395495 CDS YP_001789178.1 171056829 6162939 complement(141654..142958) 1 NC_010524.1 PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_3171 extracellular solute-binding protein, family 1; extracellular solute-binding protein 142958 6162939 Lcho_0138 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001789178.1 141654 R 395495 CDS YP_001789179.1 171056830 6162940 143174..144367 1 NC_010524.1 SMART: PUA domain containing protein; KEGG: mpt:Mpe_A3242 hypothetical protein; PUA domain-containing protein 144367 6162940 Lcho_0139 Leptothrix cholodnii SP-6 PUA domain-containing protein YP_001789179.1 143174 D 395495 CDS YP_001789180.1 171056831 6162941 144486..144839 1 NC_010524.1 KEGG: dac:Daci_1738 hypothetical protein; hypothetical protein 144839 6162941 Lcho_0140 Leptothrix cholodnii SP-6 hypothetical protein YP_001789180.1 144486 D 395495 CDS YP_001789181.1 171056832 6162942 144947..146185 1 NC_010524.1 PFAM: outer membrane efflux protein; KEGG: dac:Daci_1739 outer membrane efflux protein; outer membrane efflux protein 146185 6162942 Lcho_0141 Leptothrix cholodnii SP-6 outer membrane efflux protein YP_001789181.1 144947 D 395495 CDS YP_001789182.1 171056833 6162943 146182..146805 1 NC_010524.1 KEGG: dac:Daci_1740 hypothetical protein; hypothetical protein 146805 6162943 Lcho_0142 Leptothrix cholodnii SP-6 hypothetical protein YP_001789182.1 146182 D 395495 CDS YP_001789183.1 171056834 6163744 146802..147908 1 NC_010524.1 KEGG: dac:Daci_1741 conserved hypothetical secreted protein; hypothetical protein 147908 6163744 Lcho_0143 Leptothrix cholodnii SP-6 hypothetical protein YP_001789183.1 146802 D 395495 CDS YP_001789184.1 171056835 6163745 147928..151071 1 NC_010524.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: dac:Daci_1742 heavy metal efflux pump, CzcA family; CzcA family heavy metal efflux protein 151071 6163745 Lcho_0144 Leptothrix cholodnii SP-6 CzcA family heavy metal efflux protein YP_001789184.1 147928 D 395495 CDS YP_001789185.1 171056836 6163746 151151..151522 1 NC_010524.1 KEGG: dac:Daci_1743 hypothetical protein; hypothetical protein 151522 6163746 Lcho_0145 Leptothrix cholodnii SP-6 hypothetical protein YP_001789185.1 151151 D 395495 CDS YP_001789186.1 171056837 6163747 151677..152081 1 NC_010524.1 KEGG: pna:Pnap_1251 hypothetical protein; hypothetical protein 152081 6163747 Lcho_0146 Leptothrix cholodnii SP-6 hypothetical protein YP_001789186.1 151677 D 395495 CDS YP_001789187.1 171056838 6163748 152223..152666 1 NC_010524.1 KEGG: ajs:Ajs_1464 hypothetical protein; hypothetical protein 152666 6163748 Lcho_0147 Leptothrix cholodnii SP-6 hypothetical protein YP_001789187.1 152223 D 395495 CDS YP_001789188.1 171056839 6163749 152768..154960 1 NC_010524.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: pol:Bpro_1178 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 154960 6163749 Lcho_0148 Leptothrix cholodnii SP-6 heavy metal translocating P-type ATPase YP_001789188.1 152768 D 395495 CDS YP_001789189.1 171056840 6163205 complement(154994..155707) 1 NC_010524.1 PFAM: Ankyrin; KEGG: pol:Bpro_4103 ankyrin; ankyrin 155707 6163205 Lcho_0149 Leptothrix cholodnii SP-6 ankyrin YP_001789189.1 154994 R 395495 CDS YP_001789190.1 171056841 6163206 complement(155763..156281) 1 NC_010524.1 PFAM: protein of unknown function DUF336; KEGG: dac:Daci_1203 protein of unknown function DUF336; hypothetical protein 156281 6163206 Lcho_0150 Leptothrix cholodnii SP-6 hypothetical protein YP_001789190.1 155763 R 395495 CDS YP_001789191.1 171056842 6163207 156582..156905 1 NC_010524.1 PFAM: flagellar transcriptional activator; KEGG: mpt:Mpe_A2869 transcriptional regulator; flagellar transcriptional activator 156905 6163207 Lcho_0151 Leptothrix cholodnii SP-6 flagellar transcriptional activator YP_001789191.1 156582 D 395495 CDS YP_001789192.1 171056843 6163208 156940..157476 1 NC_010524.1 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 157476 6163208 Lcho_0152 Leptothrix cholodnii SP-6 transcriptional activator FlhC YP_001789192.1 156940 D 395495 CDS YP_001789193.1 171056844 6163209 157652..158707 1 NC_010524.1 KEGG: aav:Aave_0260 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 158707 6163209 Lcho_0153 Leptothrix cholodnii SP-6 2-dehydropantoate 2-reductase YP_001789193.1 157652 D 395495 CDS YP_001789194.1 171056845 6163210 159054..160397 1 NC_010524.1 PFAM: flavin-containing monooxygenase FMO; KEGG: mlo:mlr7328 hypothetical protein; flavin-containing monooxygenase FMO 160397 6163210 Lcho_0154 Leptothrix cholodnii SP-6 flavin-containing monooxygenase FMO YP_001789194.1 159054 D 395495 CDS YP_001789195.1 171056846 6162575 complement(160551..162923) 1 NC_010524.1 PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: pmy:Pmen_3460 glycine cleavage T protein (aminomethyl transferase); glycine cleavage T protein (aminomethyl transferase) 162923 6162575 Lcho_0155 Leptothrix cholodnii SP-6 glycine cleavage T protein (aminomethyl transferase) YP_001789195.1 160551 R 395495 CDS YP_001789196.1 171056847 6162576 complement(162923..163261) 1 NC_010524.1 PFAM: nitrogen regulatory protein P-II; KEGG: mpt:Mpe_A0171 nitrogen regulatory protein P-II-2; nitrogen regulatory protein P-II 163261 6162576 Lcho_0156 Leptothrix cholodnii SP-6 nitrogen regulatory protein P-II YP_001789196.1 162923 R 395495 CDS YP_001789197.1 171056848 6162577 complement(163308..164651) 1 NC_010524.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mfa:Mfla_0434 ammonium transporter; ammonium transporter 164651 6162577 Lcho_0157 Leptothrix cholodnii SP-6 ammonium transporter YP_001789197.1 163308 R 395495 CDS YP_001789198.1 171056849 6162578 complement(164806..166515) 1 NC_010524.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: pol:Bpro_5295 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 166515 6162578 Lcho_0158 Leptothrix cholodnii SP-6 electron-transferring-flavoprotein dehydrogenase YP_001789198.1 164806 R 395495 CDS YP_001789199.1 171056850 6162579 complement(166535..167347) 1 NC_010524.1 PFAM: N-formylglutamate amidohydrolase; KEGG: azo:azo3002 conserved hypothetical formylglutamte amindohyrolase; N-formylglutamate amidohydrolase 167347 6162579 Lcho_0159 Leptothrix cholodnii SP-6 N-formylglutamate amidohydrolase YP_001789199.1 166535 R 395495 CDS YP_001789200.1 171056851 6162580 complement(167344..168375) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B2188 transcriptional regulator, LysR-family; LysR family transcriptional regulator 168375 6162580 Lcho_0160 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001789200.1 167344 R 395495 CDS YP_001789201.1 171056852 6160405 168525..169709 1 NC_010524.1 PFAM: FAD dependent oxidoreductase; KEGG: reh:H16_B2189 D-amino-acid dehydrogenase; FAD dependent oxidoreductase 169709 6160405 Lcho_0161 Leptothrix cholodnii SP-6 FAD dependent oxidoreductase YP_001789201.1 168525 D 395495 CDS YP_001789202.1 171056853 6160406 169726..170487 1 NC_010524.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: azo:azo3005 probable electron transfer flavoprotein, beta subunit; electron transfer flavoprotein alpha/beta-subunit 170487 6160406 Lcho_0162 Leptothrix cholodnii SP-6 electron transfer flavoprotein alpha/beta-subunit YP_001789202.1 169726 D 395495 CDS YP_001789203.1 171056854 6160407 170499..171452 1 NC_010524.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: azo:azo3006 probable electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 171452 6160407 Lcho_0163 Leptothrix cholodnii SP-6 electron transfer flavoprotein subunit alpha YP_001789203.1 170499 D 395495 CDS YP_001789204.1 171056855 6160408 171449..172054 1 NC_010524.1 PFAM: protein of unknown function DUF886; KEGG: azo:azo3007 hypothetical protein; hypothetical protein 172054 6160408 Lcho_0164 Leptothrix cholodnii SP-6 hypothetical protein YP_001789204.1 171449 D 395495 CDS YP_001789205.1 171056856 6160409 complement(172064..172666) 1 NC_010524.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: azo:azo3009 putative DNA binding helix-turn helix protein; XRE family transcriptional regulator 172666 6160409 Lcho_0165 Leptothrix cholodnii SP-6 XRE family transcriptional regulator YP_001789205.1 172064 R 395495 CDS YP_001789206.1 171056857 6160410 172841..174235 1 NC_010524.1 TIGRFAM: glutamine synthetase, type III; PFAM: glutamine synthetase catalytic region; KEGG: reh:H16_B2191 glutamine synthetase; glutamine synthetase 174235 6160410 Lcho_0166 Leptothrix cholodnii SP-6 glutamine synthetase YP_001789206.1 172841 D 395495 CDS YP_001789207.1 171056858 6160652 174247..175155 1 NC_010524.1 PFAM: glutamine amidotransferase class-II; KEGG: reh:H16_B2192 glutamine amidotransferases class-II; glutamine amidotransferase 175155 6160652 Lcho_0167 Leptothrix cholodnii SP-6 glutamine amidotransferase YP_001789207.1 174247 D 395495 CDS YP_001789208.1 171056859 6160653 175143..175832 1 NC_010524.1 PFAM: glutamate synthase alpha subunit domain protein; KEGG: mfa:Mfla_0458 glutamate synthase, alpha subunit-like protein; glutamate synthase subunit alpha 175832 6160653 Lcho_0168 Leptothrix cholodnii SP-6 glutamate synthase subunit alpha YP_001789208.1 175143 D 395495 CDS YP_001789209.1 171056860 6160654 175834..177204 1 NC_010524.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; ferredoxin-dependent glutamate synthase; KEGG: rxy:Rxyl_2501 ferredoxin-dependent glutamate synthase; ferredoxin-dependent glutamate synthase 177204 6160654 Lcho_0169 Leptothrix cholodnii SP-6 ferredoxin-dependent glutamate synthase YP_001789209.1 175834 D 395495 CDS YP_001789210.1 171056861 6160655 177216..177809 1 NC_010524.1 KEGG: xau:Xaut_3182 hypothetical protein; hypothetical protein 177809 6160655 Lcho_0170 Leptothrix cholodnii SP-6 hypothetical protein YP_001789210.1 177216 D 395495 CDS YP_001789211.1 171056862 6160656 177806..178756 1 NC_010524.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: xau:Xaut_3181 ferredoxin; ferredoxin 178756 6160656 Lcho_0171 Leptothrix cholodnii SP-6 ferredoxin YP_001789211.1 177806 D 395495 CDS YP_001789212.1 171056863 6160657 178783..179862 1 NC_010524.1 KEGG: xau:Xaut_3180 conserved hypothetical cytosolic protein; hypothetical protein 179862 6160657 Lcho_0172 Leptothrix cholodnii SP-6 hypothetical protein YP_001789212.1 178783 D 395495 CDS YP_001789213.1 171056864 6160754 179958..181088 1 NC_010524.1 PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: pmy:Pmen_3456 glycine cleavage T protein (aminomethyl transferase); glycine cleavage T protein (aminomethyl transferase) 181088 6160754 Lcho_0173 Leptothrix cholodnii SP-6 glycine cleavage T protein (aminomethyl transferase) YP_001789213.1 179958 D 395495 CDS YP_001789214.1 171056865 6160755 181093..181956 1 NC_010524.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 181956 purU 6160755 purU Leptothrix cholodnii SP-6 formyltetrahydrofolate deformylase YP_001789214.1 181093 D 395495 CDS YP_001789215.1 171056866 6160756 181966..182871 1 NC_010524.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: nmu:Nmul_A0357 methenyltetrahydrofolate cyclohydrolase; methenyltetrahydrofolate cyclohydrolase 182871 6160756 Lcho_0175 Leptothrix cholodnii SP-6 methenyltetrahydrofolate cyclohydrolase YP_001789215.1 181966 D 395495 CDS YP_001789216.1 171056867 6160757 182985..185315 1 NC_010524.1 KEGG: rfr:Rfer_2918 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; 1A family penicillin-binding protein 185315 6160757 Lcho_0176 Leptothrix cholodnii SP-6 1A family penicillin-binding protein YP_001789216.1 182985 D 395495 CDS YP_001789217.1 171056868 6160758 complement(185343..185708) 1 NC_010524.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: bxe:Bxe_A2213 putative ferredoxin subunit of nitrate/nitrite reductase (NADPH); nitrite reductase (NAD(P)H) small subunit 185708 6160758 Lcho_0177 Leptothrix cholodnii SP-6 nitrite reductase (NAD(P)H) small subunit YP_001789217.1 185343 R 395495 CDS YP_001789218.1 171056869 6160759 complement(185723..188257) 1 NC_010524.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rso:RSp1222 probable nitrite reductase NADPH (large subunit) oxidoreductase protein; nitrite reductase (NAD(P)H) large subunit 188257 6160759 Lcho_0178 Leptothrix cholodnii SP-6 nitrite reductase (NAD(P)H) large subunit YP_001789218.1 185723 R 395495 CDS YP_001789219.1 171056870 6161185 188903..189370 1 NC_010524.1 PFAM: cyclic nucleotide-binding; KEGG: mpt:Mpe_A3813 cAMP-dependent protein kinase - catabolite gene activator and regulatory subunit; cyclic nucleotide-binding protein 189370 6161185 Lcho_0179 Leptothrix cholodnii SP-6 cyclic nucleotide-binding protein YP_001789219.1 188903 D 395495 CDS YP_001789220.1 171056871 6161186 189530..189931 1 NC_010524.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: bxe:Bxe_B2429 putative pterin-4-alpha-carbinolamine dehydratase (PcbD); transcriptional coactivator/pterin dehydratase 189931 6161186 Lcho_0180 Leptothrix cholodnii SP-6 transcriptional coactivator/pterin dehydratase YP_001789220.1 189530 D 395495 CDS YP_001789221.1 171056872 6161187 complement(189947..191944) 1 NC_010524.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: mpt:Mpe_A3810 sodium/hydrogen exchanger family protein; sodium/hydrogen exchanger 191944 6161187 Lcho_0181 Leptothrix cholodnii SP-6 sodium/hydrogen exchanger YP_001789221.1 189947 R 395495 CDS YP_001789222.1 171056873 6161188 191995..192987 1 NC_010524.1 KEGG: mpt:Mpe_A3809 arabinose-5-phosphate isomerase; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein 192987 6161188 Lcho_0182 Leptothrix cholodnii SP-6 KpsF/GutQ family protein YP_001789222.1 191995 D 395495 CDS YP_001789223.1 171056874 6161189 192990..193601 1 NC_010524.1 TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: mpt:Mpe_A3808 3-deoxy-manno-octulosonate-8-phosphatase; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 193601 6161189 Lcho_0183 Leptothrix cholodnii SP-6 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_001789223.1 192990 D 395495 CDS YP_001789224.1 171056875 6161190 193625..194320 1 NC_010524.1 PFAM: protein of unknown function DUF1239; KEGG: mpt:Mpe_A3807 putative transmembrane protein; hypothetical protein 194320 6161190 Lcho_0184 Leptothrix cholodnii SP-6 hypothetical protein YP_001789224.1 193625 D 395495 CDS YP_001789225.1 171056876 6161425 194353..195156 1 NC_010524.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpt:Mpe_A3806 short chain dehydrogenase; short chain dehydrogenase 195156 6161425 Lcho_0185 Leptothrix cholodnii SP-6 short chain dehydrogenase YP_001789225.1 194353 D 395495 CDS YP_001789226.1 171056877 6161426 complement(195272..195745) 1 NC_010524.1 PFAM: RNP-1 like RNA-binding protein; KEGG: mpt:Mpe_A3805 RNA-binding region RNP-1; RNP-1 like RNA-binding protein 195745 6161426 Lcho_0186 Leptothrix cholodnii SP-6 RNP-1 like RNA-binding protein YP_001789226.1 195272 R 395495 CDS YP_001789227.1 171056878 6161427 196034..196675 1 NC_010524.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: mpt:Mpe_A3804 putative transmembrane protein; multiple antibiotic resistance (MarC)-like protein 196675 6161427 Lcho_0187 Leptothrix cholodnii SP-6 multiple antibiotic resistance (MarC)-like protein YP_001789227.1 196034 D 395495 CDS YP_001789228.1 171056879 6161428 196746..198404 1 NC_010524.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: mpt:Mpe_A3803 putative choline dehydrogenase lipoprotein oxidoreductase; glucose-methanol-choline oxidoreductase 198404 6161428 Lcho_0188 Leptothrix cholodnii SP-6 glucose-methanol-choline oxidoreductase YP_001789228.1 196746 D 395495 CDS YP_001789229.1 171056880 6161429 198694..199455 1 NC_010524.1 PFAM: protein of unknown function DUF81; KEGG: mpt:Mpe_A3802 hypothetical protein; hypothetical protein 199455 6161429 Lcho_0189 Leptothrix cholodnii SP-6 hypothetical protein YP_001789229.1 198694 D 395495 CDS YP_001789230.1 171056881 6161430 complement(199583..200359) 1 NC_010524.1 PFAM: beta-lactamase domain protein; KEGG: mpt:Mpe_A0066 cAMP phosphodiesterases, class-II, metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein 200359 6161430 Lcho_0190 Leptothrix cholodnii SP-6 beta-lactamase domain-containing protein YP_001789230.1 199583 R 395495 CDS YP_001789231.1 171056882 6160705 complement(200642..201328) 1 NC_010524.1 PFAM: Forkhead-associated protein; KEGG: mpt:Mpe_A0067 hypothetical protein; FHA domain-containing protein 201328 6160705 Lcho_0191 Leptothrix cholodnii SP-6 FHA domain-containing protein YP_001789231.1 200642 R 395495 CDS YP_001789232.1 171056883 6160706 complement(201377..202183) 1 NC_010524.1 PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: mpt:Mpe_A0068 serine/threonine specific protein phosphatase (putative); protein serine/threonine phosphatase 202183 6160706 Lcho_0192 Leptothrix cholodnii SP-6 protein serine/threonine phosphatase YP_001789232.1 201377 R 395495 CDS YP_001789233.1 171056884 6160707 complement(202186..203130) 1 NC_010524.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mpt:Mpe_A0069 putative serine/threonine protein kinase; serine/threonine protein kinase 203130 6160707 Lcho_0193 Leptothrix cholodnii SP-6 serine/threonine protein kinase YP_001789233.1 202186 R 395495 CDS YP_001789234.1 171056885 6160708 complement(203300..204043) 1 NC_010524.1 PFAM: Integral membrane protein TerC; KEGG: mpt:Mpe_A0070 hypothetical protein; integral membrane protein TerC 204043 6160708 Lcho_0194 Leptothrix cholodnii SP-6 integral membrane protein TerC YP_001789234.1 203300 R 395495 CDS YP_001789235.1 171056886 6160709 204396..204797 1 NC_010524.1 PFAM: SWIB/MDM2 domain protein; KEGG: mpt:Mpe_A0056 hypothetical protein; SWIB/MDM2 domain-containing protein 204797 6160709 Lcho_0195 Leptothrix cholodnii SP-6 SWIB/MDM2 domain-containing protein YP_001789235.1 204396 D 395495 CDS YP_001789236.1 171056887 6160710 complement(204878..205825) 1 NC_010524.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 205825 6160710 Lcho_0196 Leptothrix cholodnii SP-6 N-acetyl-gamma-glutamyl-phosphate reductase YP_001789236.1 204878 R 395495 CDS YP_001789237.1 171056888 6161406 205896..206510 1 NC_010524.1 PFAM: protein of unknown function DUF1234; KEGG: mpt:Mpe_A3781 hypothetical protein; hypothetical protein 206510 6161406 Lcho_0197 Leptothrix cholodnii SP-6 hypothetical protein YP_001789237.1 205896 D 395495 CDS YP_001789238.1 171056889 6161407 206541..207449 1 NC_010524.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: mpt:Mpe_A3780 putative chromosome partitioning protein ParB; parB-like partition protein 207449 6161407 Lcho_0198 Leptothrix cholodnii SP-6 parB-like partition protein YP_001789238.1 206541 D 395495 CDS YP_001789239.1 171056890 6161408 207900..209822 1 NC_010524.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: mpt:Mpe_A3779 hypothetical protein; putative serine protein kinase PrkA 209822 6161408 Lcho_0199 Leptothrix cholodnii SP-6 putative serine protein kinase PrkA YP_001789239.1 207900 D 395495 CDS YP_001789240.1 171056891 6161409 209847..211133 1 NC_010524.1 PFAM: protein of unknown function DUF444; KEGG: mpt:Mpe_A3778 hypothetical protein; hypothetical protein 211133 6161409 Lcho_0200 Leptothrix cholodnii SP-6 hypothetical protein YP_001789240.1 209847 D 395495 CDS YP_001789241.1 171056892 6161410 211171..212769 1 NC_010524.1 PFAM: SpoVR family protein; KEGG: mpt:Mpe_A3777 hypothetical protein; SpoVR family protein 212769 6161410 Lcho_0201 Leptothrix cholodnii SP-6 SpoVR family protein YP_001789241.1 211171 D 395495 CDS YP_001789242.1 171056893 6161411 complement(212833..214254) 1 NC_010524.1 PFAM: FAD linked oxidase domain protein; KEGG: mpt:Mpe_A3774 putative oxidoreductase; D-lactate dehydrogenase 214254 6161411 Lcho_0202 Leptothrix cholodnii SP-6 D-lactate dehydrogenase YP_001789242.1 212833 R 395495 CDS YP_001789243.1 171056894 6162725 214368..215111 1 NC_010524.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: pna:Pnap_3266 putative transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 215111 6162725 Lcho_0203 Leptothrix cholodnii SP-6 Crp/FNR family transcriptional regulator YP_001789243.1 214368 D 395495 CDS YP_001789244.1 171056895 6162726 215211..215405 1 NC_010524.1 KEGG: rfr:Rfer_0021 hypothetical protein; hypothetical protein 215405 6162726 Lcho_0204 Leptothrix cholodnii SP-6 hypothetical protein YP_001789244.1 215211 D 395495 CDS YP_001789245.1 171056896 6162727 complement(215419..216225) 1 NC_010524.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mpt:Mpe_A3371 putative GntR-family transcriptional regulator; GntR family transcriptional regulator 216225 6162727 Lcho_0205 Leptothrix cholodnii SP-6 GntR family transcriptional regulator YP_001789245.1 215419 R 395495 CDS YP_001789246.1 171056897 6162728 complement(216294..217178) 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_2470 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 217178 6162728 Lcho_0206 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001789246.1 216294 R 395495 CDS YP_001789247.1 171056898 6162729 complement(217178..218074) 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A3373 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 218074 6162729 Lcho_0207 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001789247.1 217178 R 395495 CDS YP_001789248.1 171056899 6162730 complement(218095..219402) 1 NC_010524.1 KEGG: pna:Pnap_3269 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 219402 6162730 Lcho_0208 Leptothrix cholodnii SP-6 twin-arginine translocation pathway signal YP_001789248.1 218095 R 395495 CDS YP_001789249.1 171056900 6161301 complement(219487..220488) 1 NC_010524.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mpt:Mpe_A3375 ABC transporter ATP-binding protein; ABC transporter-like protein 220488 6161301 Lcho_0209 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001789249.1 219487 R 395495 CDS YP_001789250.1 171056901 6161302 220745..221488 1 NC_010524.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: mpt:Mpe_A3376 hydantoin racemase; Asp/Glu/hydantoin racemase 221488 6161302 Lcho_0210 Leptothrix cholodnii SP-6 Asp/Glu/hydantoin racemase YP_001789250.1 220745 D 395495 CDS YP_001789251.1 171056902 6161303 221594..223609 1 NC_010524.1 KEGG: azo:azo1492 putative histidine protein kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 223609 6161303 Lcho_0211 Leptothrix cholodnii SP-6 PAS/PAC sensor signal transduction histidine kinase YP_001789251.1 221594 D 395495 CDS YP_001789252.1 171056903 6161304 complement(223578..224543) 1 NC_010524.1 PFAM: protein of unknown function DUF45; KEGG: mpt:Mpe_A3377 hypothetical protein; hypothetical protein 224543 6161304 Lcho_0212 Leptothrix cholodnii SP-6 hypothetical protein YP_001789252.1 223578 R 395495 CDS YP_001789253.1 171056904 6161305 complement(224521..225285) 1 NC_010524.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mpt:Mpe_A3378 putative acyltransferase; phospholipid/glycerol acyltransferase 225285 6161305 Lcho_0213 Leptothrix cholodnii SP-6 phospholipid/glycerol acyltransferase YP_001789253.1 224521 R 395495 CDS YP_001789254.1 171056905 6161306 complement(225285..225884) 1 NC_010524.1 TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase central region; KEGG: mpt:Mpe_A3379 putative phosphatase protein; histidinol-phosphate phosphatase family protein 225884 6161306 Lcho_0214 Leptothrix cholodnii SP-6 histidinol-phosphate phosphatase family protein YP_001789254.1 225285 R 395495 CDS YP_001789255.1 171056906 6163479 complement(225895..228036) 1 NC_010524.1 KEGG: mpt:Mpe_A3380 glycine--tRNA ligase; TIGRFAM: glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta 228036 6163479 Lcho_0215 Leptothrix cholodnii SP-6 glycyl-tRNA synthetase subunit beta YP_001789255.1 225895 R 395495 CDS YP_001789256.1 171056907 6163480 complement(228042..228995) 1 NC_010524.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 228995 glyQ 6163480 glyQ Leptothrix cholodnii SP-6 glycyl-tRNA synthetase subunit alpha YP_001789256.1 228042 R 395495 CDS YP_001789257.1 171056908 6163481 complement(229088..229903) 1 NC_010524.1 KEGG: mpt:Mpe_A0256 hypothetical protein; hypothetical protein 229903 6163481 Lcho_0217 Leptothrix cholodnii SP-6 hypothetical protein YP_001789257.1 229088 R 395495 CDS YP_001789258.1 171056909 6163482 complement(229842..230666) 1 NC_010524.1 PFAM: Nucleotidyl transferase; KEGG: mpt:Mpe_A0257 putative mannose-1-phosphate guanyltransferase-related protein; nucleotidyl transferase 230666 6163482 Lcho_0218 Leptothrix cholodnii SP-6 nucleotidyl transferase YP_001789258.1 229842 R 395495 CDS YP_001789259.1 171056910 6163483 complement(230688..231263) 1 NC_010524.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: rfr:Rfer_0227 hemerythrin HHE cation binding protein; hemerythrin HHE cation-binding domain-containing protein 231263 6163483 Lcho_0219 Leptothrix cholodnii SP-6 hemerythrin HHE cation-binding domain-containing protein YP_001789259.1 230688 R 395495 CDS YP_001789260.1 171056911 6163484 231449..233494 1 NC_010524.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: ajs:Ajs_3959 transketolase; transketolase 233494 6163484 Lcho_0220 Leptothrix cholodnii SP-6 transketolase YP_001789260.1 231449 D 395495 CDS YP_001789261.1 171056912 6161941 233567..234565 1 NC_010524.1 KEGG: reh:H16_A3146 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 234565 6161941 Lcho_0221 Leptothrix cholodnii SP-6 glyceraldehyde-3-phosphate dehydrogenase YP_001789261.1 233567 D 395495 CDS YP_001789262.1 171056913 6161942 234731..236197 1 NC_010524.1 KEGG: pca:Pcar_1811 hypothetical protein; hypothetical protein 236197 6161942 Lcho_0222 Leptothrix cholodnii SP-6 hypothetical protein YP_001789262.1 234731 D 395495 CDS YP_001789263.1 171056914 6161943 236209..236835 1 NC_010524.1 KEGG: pca:Pcar_1810 hypothetical protein; hypothetical protein 236835 6161943 Lcho_0223 Leptothrix cholodnii SP-6 hypothetical protein YP_001789263.1 236209 D 395495 CDS YP_001789264.1 171056915 6161944 236825..240226 1 NC_010524.1 KEGG: pca:Pcar_1809 hypothetical protein; hypothetical protein 240226 6161944 Lcho_0224 Leptothrix cholodnii SP-6 hypothetical protein YP_001789264.1 236825 D 395495 CDS YP_001789265.1 171056916 6161945 240223..241437 1 NC_010524.1 KEGG: cph:Cpha266_1443 hypothetical protein; hypothetical protein 241437 6161945 Lcho_0225 Leptothrix cholodnii SP-6 hypothetical protein YP_001789265.1 240223 D 395495 CDS YP_001789266.1 171056917 6161946 complement(241426..242085) 1 NC_010524.1 KEGG: mpt:Mpe_A0262 putative signal peptide protein; putative signal peptide protein 242085 6161946 Lcho_0226 Leptothrix cholodnii SP-6 putative signal peptide protein YP_001789266.1 241426 R 395495 CDS YP_001789267.1 171056918 6162751 complement(242079..242867) 1 NC_010524.1 TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: mpt:Mpe_A0263 biotin acetyl-CoA-carboxylase synthetase; biotin--acetyl-CoA-carboxylase ligase 242867 6162751 Lcho_0227 Leptothrix cholodnii SP-6 biotin--acetyl-CoA-carboxylase ligase YP_001789267.1 242079 R 395495 CDS YP_001789268.1 171056919 6162752 complement(242876..243415) 1 NC_010524.1 PFAM: nuclear protein SET; KEGG: mpt:Mpe_A0264 hypothetical protein; nuclear protein SET 243415 6162752 Lcho_0228 Leptothrix cholodnii SP-6 nuclear protein SET YP_001789268.1 242876 R 395495 CDS YP_001789269.1 171056920 6162753 243539..246169 1 NC_010524.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 246169 6162753 Lcho_0229 Leptothrix cholodnii SP-6 DNA topoisomerase III YP_001789269.1 243539 D 395495 CDS YP_001789270.1 171056921 6162754 246166..247317 1 NC_010524.1 PFAM: GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: saz:Sama_3396 response regulator receiver protein; metal dependent phosphohydrolase 247317 6162754 Lcho_0230 Leptothrix cholodnii SP-6 metal dependent phosphohydrolase YP_001789270.1 246166 D 395495 CDS YP_001789271.1 171056922 6162755 247339..248295 1 NC_010524.1 PFAM: Auxin Efflux Carrier; KEGG: mpt:Mpe_A0268 putative MdcF malonate transporter; auxin efflux carrier 248295 6162755 Lcho_0231 Leptothrix cholodnii SP-6 auxin efflux carrier YP_001789271.1 247339 D 395495 CDS YP_001789272.1 171056923 6162756 complement(248341..248832) 1 NC_010524.1 KEGG: neu:NE1377 protein of unknown function DUF132; hypothetical protein 248832 6162756 Lcho_0232 Leptothrix cholodnii SP-6 hypothetical protein YP_001789272.1 248341 R 395495 CDS YP_001789273.1 171056924 6160552 249060..250733 1 NC_010524.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mpt:Mpe_A3350 putative sugar transport protein; general substrate transporter 250733 6160552 Lcho_0233 Leptothrix cholodnii SP-6 general substrate transporter YP_001789273.1 249060 D 395495 CDS YP_001789274.1 171056925 6160553 250841..251014 1 NC_010524.1 KEGG: ajs:Ajs_3750 hypothetical protein; hypothetical protein 251014 6160553 Lcho_0234 Leptothrix cholodnii SP-6 hypothetical protein YP_001789274.1 250841 D 395495 CDS YP_001789275.1 171056926 6160554 251063..251251 1 NC_010524.1 KEGG: rfr:Rfer_3780 hypothetical protein; hypothetical protein 251251 6160554 Lcho_0235 Leptothrix cholodnii SP-6 hypothetical protein YP_001789275.1 251063 D 395495 CDS YP_001789276.1 171056927 6160555 251255..254062 1 NC_010524.1 PFAM: Na+/solute symporter; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rfr:Rfer_3779 periplasmic sensor signal transduction histidine kinase; histidine kinase 254062 6160555 Lcho_0236 Leptothrix cholodnii SP-6 histidine kinase YP_001789276.1 251255 D 395495 CDS YP_001789277.1 171056928 6160556 254034..254408 1 NC_010524.1 PFAM: response regulator receiver; KEGG: rfr:Rfer_3778 response regulator receiver domain protein; response regulator receiver protein 254408 6160556 Lcho_0237 Leptothrix cholodnii SP-6 response regulator receiver protein YP_001789277.1 254034 D 395495 CDS YP_001789278.1 171056929 6160557 254405..256600 1 NC_010524.1 KEGG: rfr:Rfer_3777 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 256600 6160557 Lcho_0238 Leptothrix cholodnii SP-6 DNA polymerase III subunit epsilon YP_001789278.1 254405 D 395495 CDS YP_001789279.1 171056930 6160521 256769..257434 1 NC_010524.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; protein of unknown function DUF1289; KEGG: rfr:Rfer_3823 YbaK/prolyl-tRNA synthetase associated protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein 257434 6160521 Lcho_0239 Leptothrix cholodnii SP-6 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_001789279.1 256769 D 395495 CDS YP_001789280.1 171056931 6160522 257542..259233 1 NC_010524.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ajs:Ajs_3752 major facilitator superfamily MFS_1; major facilitator transporter 259233 6160522 Lcho_0240 Leptothrix cholodnii SP-6 major facilitator transporter YP_001789280.1 257542 D 395495 CDS YP_001789281.1 171056932 6160523 complement(259269..260456) 1 NC_010524.1 hypothetical protein 260456 6160523 Lcho_0241 Leptothrix cholodnii SP-6 hypothetical protein YP_001789281.1 259269 R 395495 CDS YP_001789282.1 171056933 6160524 complement(260453..261088) 1 NC_010524.1 PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: mpt:Mpe_A3043 DNA binding response regulator, LuxR family; two component LuxR family transcriptional regulator 261088 6160524 Lcho_0242 Leptothrix cholodnii SP-6 two component LuxR family transcriptional regulator YP_001789282.1 260453 R 395495 CDS YP_001789283.1 171056934 6160525 complement(261085..262557) 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mpt:Mpe_A3044 methanol utilization control sensor protein MoxY, putative; histidine kinase 262557 6160525 Lcho_0243 Leptothrix cholodnii SP-6 histidine kinase YP_001789283.1 261085 R 395495 CDS YP_001789284.1 171056935 6160526 262651..262833 1 NC_010524.1 PFAM: coenzyme PQQ biosynthesis protein A; coenzyme PQQ biosynthesis protein A 262833 6160526 Lcho_0244 Leptothrix cholodnii SP-6 coenzyme PQQ biosynthesis protein A YP_001789284.1 262651 D 395495 CDS YP_001789285.1 171056936 6160533 262948..263862 1 NC_010524.1 possibly involved in transport of pyrroloquinoline quinone transport; pyrroloquinoline quinone biosynthesis protein PqqB 263862 6160533 Lcho_0245 Leptothrix cholodnii SP-6 pyrroloquinoline quinone biosynthesis protein PqqB YP_001789285.1 262948 D 395495 CDS YP_001789286.1 171056937 6160534 263895..264674 1 NC_010524.1 Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC 264674 6160534 Lcho_0246 Leptothrix cholodnii SP-6 pyrroloquinoline quinone biosynthesis protein PqqC YP_001789286.1 263895 D 395495 CDS YP_001789287.1 171056938 6160535 264671..264967 1 NC_010524.1 PFAM: coenzyme PQQ synthesis D; KEGG: azo:azo1189 PqqD protein; coenzyme PQQ synthesis D 264967 6160535 Lcho_0247 Leptothrix cholodnii SP-6 coenzyme PQQ synthesis D YP_001789287.1 264671 D 395495 CDS YP_001789288.1 171056939 6160536 264964..266124 1 NC_010524.1 KEGG: azo:azo1190 pyrroloquinoline quinone biosynthesis protein PqqE; TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; pyrroloquinoline quinone biosynthesis protein PqqE 266124 6160536 Lcho_0248 Leptothrix cholodnii SP-6 pyrroloquinoline quinone biosynthesis protein PqqE YP_001789288.1 264964 D 395495 CDS YP_001789289.1 171056940 6160537 266201..266644 1 NC_010524.1 PFAM: UspA domain protein; KEGG: mpt:Mpe_A3490 universal stress protein; UspA domain-containing protein 266644 6160537 Lcho_0249 Leptothrix cholodnii SP-6 UspA domain-containing protein YP_001789289.1 266201 D 395495 CDS YP_001789290.1 171056941 6160538 complement(266729..267115) 1 NC_010524.1 KEGG: reu:Reut_B3636 hypothetical protein; hypothetical protein 267115 6160538 Lcho_0250 Leptothrix cholodnii SP-6 hypothetical protein YP_001789290.1 266729 R 395495 CDS YP_001789291.1 171056942 6160527 complement(267120..267866) 1 NC_010524.1 PFAM: cytochrome c oxidase subunit III; KEGG: pol:Bpro_0729 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 267866 6160527 Lcho_0251 Leptothrix cholodnii SP-6 cytochrome c oxidase subunit III YP_001789291.1 267120 R 395495 CDS YP_001789292.1 171056943 6160528 complement(267893..268561) 1 NC_010524.1 PFAM: cytochrome c oxidase subunit III; KEGG: pol:Bpro_0728 cytochrome c oxidase subunit III; cytochrome c oxidase subunit III 268561 6160528 Lcho_0252 Leptothrix cholodnii SP-6 cytochrome c oxidase subunit III YP_001789292.1 267893 R 395495 CDS YP_001789293.1 171056944 6160529 complement(268558..270324) 1 NC_010524.1 KEGG: pol:Bpro_0727 cytochrome-c oxidase; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I 270324 6160529 Lcho_0253 Leptothrix cholodnii SP-6 cytochrome c oxidase subunit I YP_001789293.1 268558 R 395495 CDS YP_001789294.1 171056945 6160530 complement(270367..271176) 1 NC_010524.1 PFAM: cytochrome c oxidase subunit II; KEGG: har:HEAR1115 putative cytochrome c oxidase polypeptide II precursor (cytochrome cbb3 subunit 2) (oxidase aa(3) subunit 2) ith a fused monohemic cytochrome c at its C terminus; cytochrome c oxidase subunit II 271176 6160530 Lcho_0254 Leptothrix cholodnii SP-6 cytochrome c oxidase subunit II YP_001789294.1 270367 R 395495 CDS YP_001789295.1 171056946 6160531 complement(271228..271731) 1 NC_010524.1 KEGG: mms:mma_1857 hypothetical protein; hypothetical protein 271731 6160531 Lcho_0255 Leptothrix cholodnii SP-6 hypothetical protein YP_001789295.1 271228 R 395495 CDS YP_001789296.1 171056947 6160532 271937..272416 1 NC_010524.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: pol:Bpro_4739 YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated domain-containing protein 272416 6160532 Lcho_0256 Leptothrix cholodnii SP-6 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_001789296.1 271937 D 395495 CDS YP_001789297.1 171056948 6160576 272459..273232 1 NC_010524.1 KEGG: azo:azo2876 hypothetical protein; hypothetical protein 273232 6160576 Lcho_0257 Leptothrix cholodnii SP-6 hypothetical protein YP_001789297.1 272459 D 395495 CDS YP_001789298.1 171056949 6160577 273378..273941 1 NC_010524.1 TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: psa:PST_3162 alkyl hydroperoxide reductase subunit C; peroxiredoxin 273941 6160577 Lcho_0258 Leptothrix cholodnii SP-6 peroxiredoxin YP_001789298.1 273378 D 395495 CDS YP_001789299.1 171056950 6160578 274065..275648 1 NC_010524.1 TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutaredoxin; KEGG: rso:RSp0246 probable alkyl hydroperoxide reductase (subunit F) oxidoreductase protein; alkyl hydroperoxide reductase subunit F 275648 6160578 Lcho_0259 Leptothrix cholodnii SP-6 alkyl hydroperoxide reductase subunit F YP_001789299.1 274065 D 395495 CDS YP_001789300.1 171056951 6160579 complement(275673..276581) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_4560 transcriptional regulator, LysR family; LysR family transcriptional regulator 276581 6160579 Lcho_0260 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001789300.1 275673 R 395495 CDS YP_001789301.1 171056952 6160580 276698..277339 1 NC_010524.1 PFAM: DSBA oxidoreductase; KEGG: aav:Aave_3987 DsbA oxidoreductase; DSBA oxidoreductase 277339 6160580 Lcho_0261 Leptothrix cholodnii SP-6 DSBA oxidoreductase YP_001789301.1 276698 D 395495 CDS YP_001789302.1 171056953 6160581 277484..278080 1 NC_010524.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bch:Bcen2424_3500 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 278080 6160581 Lcho_0262 Leptothrix cholodnii SP-6 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001789302.1 277484 D 395495 CDS YP_001789303.1 171056954 6160508 278230..278706 1 NC_010524.1 KEGG: mpt:Mpe_A0593 hypothetical protein; hypothetical protein 278706 6160508 Lcho_0263 Leptothrix cholodnii SP-6 hypothetical protein YP_001789303.1 278230 D 395495 CDS YP_001789304.1 171056955 6160509 278717..280453 1 NC_010524.1 PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: mpt:Mpe_A0594 family M61 unassigned peptidase; peptidase M61 domain-containing protein 280453 6160509 Lcho_0264 Leptothrix cholodnii SP-6 peptidase M61 domain-containing protein YP_001789304.1 278717 D 395495 CDS YP_001789305.1 171056956 6160510 280523..281725 1 NC_010524.1 KEGG: mpt:Mpe_A0595 hypothetical protein; hypothetical protein 281725 6160510 Lcho_0265 Leptothrix cholodnii SP-6 hypothetical protein YP_001789305.1 280523 D 395495 CDS YP_001789306.1 171056957 6160511 281825..282622 1 NC_010524.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: aav:Aave_0882 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 282622 6160511 Lcho_0266 Leptothrix cholodnii SP-6 enoyl-CoA hydratase/isomerase YP_001789306.1 281825 D 395495 CDS YP_001789307.1 171056958 6160512 complement(282692..283399) 1 NC_010524.1 KEGG: mpt:Mpe_A0592 putative thiol:disulfide interchange protein; putative thiol:disulfide interchange protein 283399 6160512 Lcho_0267 Leptothrix cholodnii SP-6 putative thiol:disulfide interchange protein YP_001789307.1 282692 R 395495 CDS YP_001789308.1 171056959 6160513 complement(283501..284640) 1 NC_010524.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: mpt:Mpe_A0591 monooxygenase family protein; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 284640 6160513 Lcho_0268 Leptothrix cholodnii SP-6 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase YP_001789308.1 283501 R 395495 CDS YP_001789309.1 171056960 6160539 complement(284699..284935) 1 NC_010524.1 PFAM: Tail Collar domain protein; KEGG: pna:Pnap_4767 phage tail collar domain protein; tail collar domain-containing protein 284935 6160539 Lcho_0269 Leptothrix cholodnii SP-6 tail collar domain-containing protein YP_001789309.1 284699 R 395495 CDS YP_001789310.1 171056961 6160540 285092..285964 1 NC_010524.1 PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: mpt:Mpe_A0589 hypothetical protein; MOSC domain-containing protein 285964 6160540 Lcho_0270 Leptothrix cholodnii SP-6 MOSC domain-containing protein YP_001789310.1 285092 D 395495 CDS YP_001789311.1 171056962 6160541 286128..287222 1 NC_010524.1 TIGRFAM: GTP-binding protein YchF; PFAM: GTP-binding protein HSR1-related; Protein of unknown function DUF933; KEGG: mpt:Mpe_A3166 putative GTP-binding protein; GTP-binding protein YchF 287222 6160541 Lcho_0271 Leptothrix cholodnii SP-6 GTP-binding protein YchF YP_001789311.1 286128 D 395495 CDS YP_001789312.1 171056963 6160542 287248..287481 1 NC_010524.1 hypothetical protein 287481 6160542 Lcho_0272 Leptothrix cholodnii SP-6 hypothetical protein YP_001789312.1 287248 D 395495 CDS YP_001789313.1 171056964 6160543 complement(287506..288492) 1 NC_010524.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: rru:Rru_A1847 transglutaminase-like; transglutaminase domain-containing protein 288492 6160543 Lcho_0273 Leptothrix cholodnii SP-6 transglutaminase domain-containing protein YP_001789313.1 287506 R 395495 CDS YP_001789314.1 171056965 6160544 complement(288567..290096) 1 NC_010524.1 KEGG: dac:Daci_1594 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 290096 6160544 Lcho_0274 Leptothrix cholodnii SP-6 protease Do YP_001789314.1 288567 R 395495 CDS YP_001789315.1 171056966 6163968 complement(290209..291537) 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: azo:azo3673 two-component system histidine kinase; histidine kinase 291537 6163968 Lcho_0275 Leptothrix cholodnii SP-6 histidine kinase YP_001789315.1 290209 R 395495 CDS YP_001789316.1 171056967 6163969 complement(291534..291638) 1 NC_010524.1 hypothetical protein 291638 6163969 Lcho_0276 Leptothrix cholodnii SP-6 hypothetical protein YP_001789316.1 291534 R 395495 CDS YP_001789317.1 171056968 6163970 complement(291635..292342) 1 NC_010524.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bte:BTH_I0673 DNA-binding response regulator; two component transcriptional regulator 292342 6163970 Lcho_0277 Leptothrix cholodnii SP-6 two component transcriptional regulator YP_001789317.1 291635 R 395495 CDS YP_001789318.1 171056969 6163971 complement(292342..292767) 1 NC_010524.1 PFAM: regulatory protein AsnC/Lrp family; Helix-turn-helix type 11 domain protein; KEGG: rfr:Rfer_3882 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 292767 6163971 Lcho_0278 Leptothrix cholodnii SP-6 AsnC family transcriptional regulator YP_001789318.1 292342 R 395495 CDS YP_001789319.1 171056970 6163972 292901..293950 1 NC_010524.1 catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase 293950 6163972 Lcho_0279 Leptothrix cholodnii SP-6 ornithine cyclodeaminase YP_001789319.1 292901 D 395495 CDS YP_001789320.1 171056971 6163973 complement(293979..295118) 1 NC_010524.1 KEGG: dar:Daro_1057 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 295118 6163973 Lcho_0280 Leptothrix cholodnii SP-6 twin-arginine translocation pathway signal YP_001789320.1 293979 R 395495 CDS YP_001789321.1 171056972 6160343 295377..297548 1 NC_010524.1 TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: vch:VC1560 catalase/peroxidase; catalase/peroxidase HPI 297548 6160343 Lcho_0281 Leptothrix cholodnii SP-6 catalase/peroxidase HPI YP_001789321.1 295377 D 395495 CDS YP_001789322.1 171056973 6160344 complement(297560..298906) 1 NC_010524.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: pmy:Pmen_0570 metal dependent phosphohydrolase; metal dependent phosphohydrolase 298906 6160344 Lcho_0282 Leptothrix cholodnii SP-6 metal dependent phosphohydrolase YP_001789322.1 297560 R 395495 CDS YP_001789323.1 171056974 6160345 299046..302096 1 NC_010524.1 PFAM: protein of unknown function DUF748; KEGG: mpt:Mpe_A2234 hypothetical protein; hypothetical protein 302096 6160345 Lcho_0283 Leptothrix cholodnii SP-6 hypothetical protein YP_001789323.1 299046 D 395495 CDS YP_001789324.1 171056975 6160346 complement(302103..302588) 1 NC_010524.1 KEGG: eba:ebB57 hypothetical protein; hypothetical protein 302588 6160346 Lcho_0284 Leptothrix cholodnii SP-6 hypothetical protein YP_001789324.1 302103 R 395495 CDS YP_001789325.1 171056976 6160347 complement(302627..303022) 1 NC_010524.1 KEGG: eba:ebB56 hypothetical protein; hypothetical protein 303022 6160347 Lcho_0285 Leptothrix cholodnii SP-6 hypothetical protein YP_001789325.1 302627 R 395495 CDS YP_001789326.1 171056977 6160348 complement(303088..304092) 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: rfr:Rfer_3194 uncharacterized protein UPF0065; hypothetical protein 304092 6160348 Lcho_0286 Leptothrix cholodnii SP-6 hypothetical protein YP_001789326.1 303088 R 395495 CDS YP_001789327.1 171056978 6160877 complement(304124..304612) 1 NC_010524.1 PFAM: Endoribonuclease L-PSP; KEGG: pol:Bpro_2665 endoribonuclease L-PSP; endoribonuclease L-PSP 304612 6160877 Lcho_0287 Leptothrix cholodnii SP-6 endoribonuclease L-PSP YP_001789327.1 304124 R 395495 CDS YP_001789328.1 171056979 6160878 complement(304617..306161) 1 NC_010524.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 306161 lysS 6160878 lysS Leptothrix cholodnii SP-6 lysyl-tRNA synthetase YP_001789328.1 304617 R 395495 CDS YP_001789329.1 171056980 6160879 306280..307338 1 NC_010524.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: bbr:BB0155 probable oxidoreductase; oxidoreductase domain-containing protein 307338 6160879 Lcho_0289 Leptothrix cholodnii SP-6 oxidoreductase domain-containing protein YP_001789329.1 306280 D 395495 CDS YP_001789330.1 171056981 6160880 307358..307942 1 NC_010524.1 KEGG: reh:H16_B0032 acetyltransferase; acetyltransferase 307942 6160880 Lcho_0290 Leptothrix cholodnii SP-6 acetyltransferase YP_001789330.1 307358 D 395495 CDS YP_001789331.1 171056982 6160881 308023..309195 1 NC_010524.1 KEGG: cau:Caur_3354 hypothetical protein; hypothetical protein 309195 6160881 Lcho_0291 Leptothrix cholodnii SP-6 hypothetical protein YP_001789331.1 308023 D 395495 CDS YP_001789332.1 171056983 6160882 309195..309716 1 NC_010524.1 KEGG: maq:Maqu_1318 hypothetical protein; hypothetical protein 309716 6160882 Lcho_0292 Leptothrix cholodnii SP-6 hypothetical protein YP_001789332.1 309195 D 395495 CDS YP_001789333.1 171056984 6161823 309732..310880 1 NC_010524.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; aminotransferase class-III; KEGG: bpt:Bpet4818 lipopolysaccharides biosynthesis aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 310880 6161823 Lcho_0293 Leptothrix cholodnii SP-6 DegT/DnrJ/EryC1/StrS aminotransferase YP_001789333.1 309732 D 395495 CDS YP_001789334.1 171056985 6161824 310877..312157 1 NC_010524.1 PFAM: polysaccharide biosynthesis protein; KEGG: bpt:Bpet1527 hypothetical protein; polysaccharide biosynthesis protein 312157 6161824 Lcho_0294 Leptothrix cholodnii SP-6 polysaccharide biosynthesis protein YP_001789334.1 310877 D 395495 CDS YP_001789335.1 171056986 6161825 312195..312881 1 NC_010524.1 KEGG: bpt:Bpet1526 acetyltransferase; acetyltransferase 312881 6161825 Lcho_0295 Leptothrix cholodnii SP-6 acetyltransferase YP_001789335.1 312195 D 395495 CDS YP_001789336.1 171056987 6161826 312893..313990 1 NC_010524.1 PFAM: glycosyl transferase group 1; KEGG: bpt:Bpet1525 glycosyltransferase; group 1 glycosyl transferase 313990 6161826 Lcho_0296 Leptothrix cholodnii SP-6 group 1 glycosyl transferase YP_001789336.1 312893 D 395495 CDS YP_001789337.1 171056988 6161827 313987..315237 1 NC_010524.1 PFAM: glycosyl transferase group 1; KEGG: plu:plu4805 WblI protein; group 1 glycosyl transferase 315237 6161827 Lcho_0297 Leptothrix cholodnii SP-6 group 1 glycosyl transferase YP_001789337.1 313987 D 395495 CDS YP_001789338.1 171056989 6161828 315240..316031 1 NC_010524.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mpt:Mpe_A0605 hypothetical protein; type 11 methyltransferase 316031 6161828 Lcho_0298 Leptothrix cholodnii SP-6 type 11 methyltransferase YP_001789338.1 315240 D 395495 CDS YP_001789339.1 171056990 6161496 316103..317281 1 NC_010524.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mpt:Mpe_A0607 lipopolysaccharide biosynthesis protein; glutamine--scyllo-inositol transaminase 317281 6161496 Lcho_0299 Leptothrix cholodnii SP-6 glutamine--scyllo-inositol transaminase YP_001789339.1 316103 D 395495 CDS YP_001789340.1 171056991 6161497 317338..317943 1 NC_010524.1 PFAM: sugar transferase; KEGG: mpt:Mpe_A0608 putative sugar transferase; sugar transferase 317943 6161497 Lcho_0300 Leptothrix cholodnii SP-6 sugar transferase YP_001789340.1 317338 D 395495 CDS YP_001789341.1 171056992 6161498 317981..319852 1 NC_010524.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: mpt:Mpe_A0609 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein CapD 319852 6161498 Lcho_0301 Leptothrix cholodnii SP-6 polysaccharide biosynthesis protein CapD YP_001789341.1 317981 D 395495 CDS YP_001789342.1 171056993 6161499 319917..320825 1 NC_010524.1 PFAM: Patatin; KEGG: aav:Aave_2086 patatin; patatin 320825 6161499 Lcho_0302 Leptothrix cholodnii SP-6 patatin YP_001789342.1 319917 D 395495 CDS YP_001789343.1 171056994 6161500 complement(320880..323849) 1 NC_010524.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: reh:H16_A0400 excinuclease ABC, ATPase subunit (A); excinuclease ABC subunit A 323849 6161500 Lcho_0303 Leptothrix cholodnii SP-6 excinuclease ABC subunit A YP_001789343.1 320880 R 395495 CDS YP_001789344.1 171056995 6163189 330640..330918 1 NC_010524.1 hypothetical protein 330918 6163189 Lcho_0304 Leptothrix cholodnii SP-6 hypothetical protein YP_001789344.1 330640 D 395495 CDS YP_001789345.1 171056996 6163190 complement(330958..331857) 1 NC_010524.1 PFAM: Pirin domain protein; KEGG: azo:azo3369 hypothetical protein; pirin domain-containing protein 331857 6163190 Lcho_0305 Leptothrix cholodnii SP-6 pirin domain-containing protein YP_001789345.1 330958 R 395495 CDS YP_001789346.1 171056997 6163191 complement(331951..332580) 1 NC_010524.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: eba:ebA3879 acyl carrier protein phosphodiesterase; NAD(P)H dehydrogenase (quinone) 332580 6163191 Lcho_0306 Leptothrix cholodnii SP-6 NAD(P)H dehydrogenase (quinone) YP_001789346.1 331951 R 395495 CDS YP_001789347.1 171056998 6163192 332719..333687 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azo:azo3371 putative transcriptional regulator, LysR family; LysR family transcriptional regulator 333687 6163192 Lcho_0307 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001789347.1 332719 D 395495 CDS YP_001789348.1 171056999 6163193 333698..334546 1 NC_010524.1 KEGG: pna:Pnap_1706 hypothetical protein; hypothetical protein 334546 6163193 Lcho_0308 Leptothrix cholodnii SP-6 hypothetical protein YP_001789348.1 333698 D 395495 CDS YP_001789349.1 171057000 6163177 complement(334561..335532) 1 NC_010524.1 KEGG: rpc:RPC_0663 proline dehydrogenase; hypothetical protein 335532 6163177 Lcho_0309 Leptothrix cholodnii SP-6 hypothetical protein YP_001789349.1 334561 R 395495 CDS YP_001789350.1 171057001 6163178 complement(335661..336269) 1 NC_010524.1 PFAM: Glutathione S-transferase domain; KEGG: aav:Aave_0048 glutathione S-transferase, C-terminal domain; glutathione S-transferase domain-containing protein 336269 6163178 Lcho_0310 Leptothrix cholodnii SP-6 glutathione S-transferase domain-containing protein YP_001789350.1 335661 R 395495 CDS YP_001789351.1 171057002 6163179 336435..336815 1 NC_010524.1 PFAM: glutaredoxin; KEGG: rfr:Rfer_0010 glutaredoxin; glutaredoxin 336815 6163179 Lcho_0311 Leptothrix cholodnii SP-6 glutaredoxin YP_001789351.1 336435 D 395495 CDS YP_001789352.1 171057003 6163180 336959..337771 1 NC_010524.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: mpt:Mpe_A3688 putative signal transduction protein; putative signal transduction protein 337771 6163180 Lcho_0312 Leptothrix cholodnii SP-6 putative signal transduction protein YP_001789352.1 336959 D 395495 CDS YP_001789353.1 171057004 6163181 337875..339152 1 NC_010524.1 KEGG: mgi:Mflv_3257 GTP cyclohydrolase II; hypothetical protein 339152 6163181 Lcho_0313 Leptothrix cholodnii SP-6 hypothetical protein YP_001789353.1 337875 D 395495 CDS YP_001789354.1 171057005 6163182 339163..340491 1 NC_010524.1 PFAM: protein of unknown function DUF1688; KEGG: rha:RHA1_ro00257 hypothetical protein; hypothetical protein 340491 6163182 Lcho_0314 Leptothrix cholodnii SP-6 hypothetical protein YP_001789354.1 339163 D 395495 CDS YP_001789355.1 171057006 6162539 340534..341169 1 NC_010524.1 TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: rfr:Rfer_2073 uracil phosphoribosyltransferase; uracil phosphoribosyltransferase 341169 6162539 Lcho_0315 Leptothrix cholodnii SP-6 uracil phosphoribosyltransferase YP_001789355.1 340534 D 395495 CDS YP_001789356.1 171057007 6162540 complement(341023..342525) 1 NC_010524.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: mpt:Mpe_A3620 putative glutamate synthase; ferredoxin-dependent glutamate synthase 342525 6162540 Lcho_0316 Leptothrix cholodnii SP-6 ferredoxin-dependent glutamate synthase YP_001789356.1 341023 R 395495 CDS YP_001789357.1 171057008 6162541 342759..344360 1 NC_010524.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: kra:Krad_2011 diguanylate cyclase; diguanylate cyclase 344360 6162541 Lcho_0317 Leptothrix cholodnii SP-6 diguanylate cyclase YP_001789357.1 342759 D 395495 CDS YP_001789358.1 171057009 6162542 344428..345717 1 NC_010524.1 Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase 345717 6162542 Lcho_0318 Leptothrix cholodnii SP-6 cytosine deaminase YP_001789358.1 344428 D 395495 CDS YP_001789359.1 171057010 6162543 345806..346426 1 NC_010524.1 PFAM: Glutathione S-transferase domain; KEGG: aav:Aave_4668 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 346426 6162543 Lcho_0319 Leptothrix cholodnii SP-6 glutathione S-transferase domain-containing protein YP_001789359.1 345806 D 395495 CDS YP_001789360.1 171057011 6162544 complement(346433..346960) 1 NC_010524.1 hypothetical protein 346960 6162544 Lcho_0320 Leptothrix cholodnii SP-6 hypothetical protein YP_001789360.1 346433 R 395495 CDS YP_001789361.1 171057012 6161445 347393..348526 1 NC_010524.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 348526 metX 6161445 metX Leptothrix cholodnii SP-6 homoserine O-acetyltransferase YP_001789361.1 347393 D 395495 CDS YP_001789362.1 171057013 6161446 348523..349107 1 NC_010524.1 TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: mpt:Mpe_A3583 hypothetical protein; methionine biosynthesis protein MetW 349107 6161446 Lcho_0322 Leptothrix cholodnii SP-6 methionine biosynthesis protein MetW YP_001789362.1 348523 D 395495 CDS YP_001789363.1 171057014 6161447 349450..349977 1 NC_010524.1 hypothetical protein 349977 6161447 Lcho_0323 Leptothrix cholodnii SP-6 hypothetical protein YP_001789363.1 349450 D 395495 CDS YP_001789364.1 171057015 6161448 350044..351537 1 NC_010524.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mpt:Mpe_A3578 putative peptidase; peptidase M20 351537 6161448 Lcho_0324 Leptothrix cholodnii SP-6 peptidase M20 YP_001789364.1 350044 D 395495 CDS YP_001789365.1 171057016 6161449 complement(351562..352647) 1 NC_010524.1 PFAM: Auxin Efflux Carrier; KEGG: mpt:Mpe_A0129 malonate transporter, putative; auxin efflux carrier 352647 6161449 Lcho_0325 Leptothrix cholodnii SP-6 auxin efflux carrier YP_001789365.1 351562 R 395495 CDS YP_001789366.1 171057017 6161450 complement(352711..353715) 1 NC_010524.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: aav:Aave_0755 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit Dctp 353715 6161450 Lcho_0326 Leptothrix cholodnii SP-6 TRAP dicarboxylate transporter subunit Dctp YP_001789366.1 352711 R 395495 CDS YP_001789367.1 171057018 6160379 complement(353826..354329) 1 NC_010524.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; KEGG: pna:Pnap_0046 carbohydrate kinase, thermoresistant glucokinase family; carbohydrate kinase 354329 6160379 Lcho_0327 Leptothrix cholodnii SP-6 carbohydrate kinase YP_001789367.1 353826 R 395495 CDS YP_001789368.1 171057019 6160380 354499..355524 1 NC_010524.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pna:Pnap_0047 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 355524 6160380 Lcho_0328 Leptothrix cholodnii SP-6 LacI family transcriptional regulator YP_001789368.1 354499 D 395495 CDS YP_001789369.1 171057020 6160381 complement(355539..356930) 1 NC_010524.1 KEGG: mpt:Mpe_A1429 L-serine ammonia-lyase; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 356930 6160381 Lcho_0329 Leptothrix cholodnii SP-6 L-serine dehydratase 1 YP_001789369.1 355539 R 395495 CDS YP_001789370.1 171057021 6160382 complement(356999..359038) 1 NC_010524.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: cvi:CV_3427 hypothetical protein; diguanylate cyclase/phosphodiesterase 359038 6160382 Lcho_0330 Leptothrix cholodnii SP-6 diguanylate cyclase/phosphodiesterase YP_001789370.1 356999 R 395495 CDS YP_001789371.1 171057022 6160383 359370..359687 1 NC_010524.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; anti-sigma-factor antagonist 359687 6160383 Lcho_0331 Leptothrix cholodnii SP-6 anti-sigma-factor antagonist YP_001789371.1 359370 D 395495 CDS YP_001789372.1 171057023 6160384 359684..361954 1 NC_010524.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: asa:ASA_3266 chemotaxis protein CheA; CheA signal transduction histidine kinase 361954 6160384 Lcho_0332 Leptothrix cholodnii SP-6 CheA signal transduction histidine kinase YP_001789372.1 359684 D 395495 CDS YP_001789373.1 171057024 6160564 361951..364113 1 NC_010524.1 KEGG: rpe:RPE_1195 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer 364113 6160564 Lcho_0333 Leptothrix cholodnii SP-6 Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer YP_001789373.1 361951 D 395495 CDS YP_001789374.1 171057025 6160565 364124..364633 1 NC_010524.1 PFAM: CheW domain protein; KEGG: psb:Psyr_0784 CheW-like protein; CheW protein 364633 6160565 Lcho_0334 Leptothrix cholodnii SP-6 CheW protein YP_001789374.1 364124 D 395495 CDS YP_001789375.1 171057026 6160566 364639..365481 1 NC_010524.1 PFAM: MCP methyltransferase CheR-type; KEGG: rfr:Rfer_0904 MCP methyltransferase, CheR-type; CheR-type MCP methyltransferase 365481 6160566 Lcho_0335 Leptothrix cholodnii SP-6 CheR-type MCP methyltransferase YP_001789375.1 364639 D 395495 CDS YP_001789376.1 171057027 6160567 365484..366041 1 NC_010524.1 stimulates methylation of MCP proteins; KEGG: rfr:Rfer_0905 CheD, stimulates methylation of MCP proteins; hypothetical protein 366041 6160567 Lcho_0336 Leptothrix cholodnii SP-6 hypothetical protein YP_001789376.1 365484 D 395495 CDS YP_001789377.1 171057028 6160568 366058..367128 1 NC_010524.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: dar:Daro_1148 chemotaxis-specific methylesterase; response regulator receiver modulated CheB methylesterase 367128 6160568 Lcho_0337 Leptothrix cholodnii SP-6 response regulator receiver modulated CheB methylesterase YP_001789377.1 366058 D 395495 CDS YP_001789378.1 171057029 6160569 367212..367790 1 NC_010524.1 PFAM: NnrUfamily protein; KEGG: mpt:Mpe_A0055 hypothetical protein; NnrU family protein 367790 6160569 Lcho_0338 Leptothrix cholodnii SP-6 NnrU family protein YP_001789378.1 367212 D 395495 CDS YP_001789379.1 171057030 6161140 367875..369938 1 NC_010524.1 PFAM: UvrD/REP helicase; KEGG: mpt:Mpe_A0128 putative ATP-dependent DNA helicase rep protein; UvrD/REP helicase 369938 6161140 Lcho_0339 Leptothrix cholodnii SP-6 UvrD/REP helicase YP_001789379.1 367875 D 395495 CDS YP_001789380.1 171057031 6161141 370205..372079 1 NC_010524.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: pha:PSHAa2649 serine protease precursor; peptidase S8/S53 subtilisin kexin sedolisin 372079 6161141 Lcho_0340 Leptothrix cholodnii SP-6 peptidase S8/S53 subtilisin kexin sedolisin YP_001789380.1 370205 D 395495 CDS YP_001789381.1 171057032 6161142 372330..374213 1 NC_010524.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; peptidase domain protein; KEGG: pha:PSHAa2649 serine protease precursor; peptidase S8/S53 subtilisin kexin sedolisin 374213 6161142 Lcho_0341 Leptothrix cholodnii SP-6 peptidase S8/S53 subtilisin kexin sedolisin YP_001789381.1 372330 D 395495 CDS YP_001789382.1 171057033 6161143 complement(374197..376251) 1 NC_010524.1 PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: aav:Aave_0649 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); diguanylate cyclase/phosphodiesterase 376251 6161143 Lcho_0342 Leptothrix cholodnii SP-6 diguanylate cyclase/phosphodiesterase YP_001789382.1 374197 R 395495 CDS YP_001789383.1 171057034 6161144 376351..376734 1 NC_010524.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: mpt:Mpe_A0276 preprotein translocase YajC subunit; preprotein translocase subunit YajC 376734 6161144 Lcho_0343 Leptothrix cholodnii SP-6 preprotein translocase subunit YajC YP_001789383.1 376351 D 395495 CDS YP_001789384.1 171057035 6161145 376828..378729 1 NC_010524.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 378729 secD 6161145 secD Leptothrix cholodnii SP-6 preprotein translocase subunit SecD YP_001789384.1 376828 D 395495 CDS YP_001789385.1 171057036 6160690 378754..379788 1 NC_010524.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 379788 secF 6160690 secF Leptothrix cholodnii SP-6 preprotein translocase subunit SecF YP_001789385.1 378754 D 395495 CDS YP_001789386.1 171057037 6160691 379848..382400 1 NC_010524.1 KEGG: mpt:Mpe_A0279 hypothetical protein; hypothetical protein 382400 6160691 Lcho_0346 Leptothrix cholodnii SP-6 hypothetical protein YP_001789386.1 379848 D 395495 CDS YP_001789387.1 171057038 6160692 complement(382434..382886) 1 NC_010524.1 PFAM: protein of unknown function DUF494; KEGG: mpt:Mpe_A0280 hypothetical protein; hypothetical protein 382886 6160692 Lcho_0347 Leptothrix cholodnii SP-6 hypothetical protein YP_001789387.1 382434 R 395495 CDS YP_001789388.1 171057039 6160693 complement(382955..384094) 1 NC_010524.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: mpt:Mpe_A0281 putative smf protein; DNA protecting protein DprA 384094 6160693 Lcho_0348 Leptothrix cholodnii SP-6 DNA protecting protein DprA YP_001789388.1 382955 R 395495 CDS YP_001789389.1 171057040 6160694 complement(384107..385291) 1 NC_010524.1 PFAM: Peptidoglycan-binding LysM; KEGG: mpt:Mpe_A0282 putative signal peptide protein; peptidoglycan-binding LysM 385291 6160694 Lcho_0349 Leptothrix cholodnii SP-6 peptidoglycan-binding LysM YP_001789389.1 384107 R 395495 CDS YP_001789390.1 171057041 6160695 385464..385979 1 NC_010524.1 KEGG: mpt:Mpe_A0283 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 385979 6160695 Lcho_0350 Leptothrix cholodnii SP-6 peptide deformylase YP_001789390.1 385464 D 395495 CDS YP_001789391.1 171057042 6162821 385976..386944 1 NC_010524.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: ajs:Ajs_4053 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 386944 6162821 Lcho_0351 Leptothrix cholodnii SP-6 methionyl-tRNA formyltransferase YP_001789391.1 385976 D 395495 CDS YP_001789392.1 171057043 6162822 387029..387490 1 NC_010524.1 KEGG: mpt:Mpe_A0286 hypothetical protein; hypothetical protein 387490 6162822 Lcho_0352 Leptothrix cholodnii SP-6 hypothetical protein YP_001789392.1 387029 D 395495 CDS YP_001789393.1 171057044 6162823 387589..388368 1 NC_010524.1 PFAM: AzlC family protein; KEGG: mpt:Mpe_A0287 hypothetical protein; AzlC family protein 388368 6162823 Lcho_0353 Leptothrix cholodnii SP-6 AzlC family protein YP_001789393.1 387589 D 395495 CDS YP_001789394.1 171057045 6162824 388419..388748 1 NC_010524.1 PFAM: branched-chain amino acid transport; KEGG: ajs:Ajs_4055 branched-chain amino acid transport; branched-chain amino acid transport 388748 6162824 Lcho_0354 Leptothrix cholodnii SP-6 branched-chain amino acid transport YP_001789394.1 388419 D 395495 CDS YP_001789395.1 171057046 6162825 388819..390012 1 NC_010524.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 390012 pgk 6162825 pgk Leptothrix cholodnii SP-6 phosphoglycerate kinase YP_001789395.1 388819 D 395495 CDS YP_001789396.1 171057047 6162826 390155..390637 1 NC_010524.1 KEGG: pna:Pnap_4909 protein of unknown function DUF88; hypothetical protein 390637 6162826 Lcho_0356 Leptothrix cholodnii SP-6 hypothetical protein YP_001789396.1 390155 D 395495 CDS YP_001789397.1 171057048 6163660 390738..391043 1 NC_010524.1 PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_2453 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 391043 6163660 Lcho_0357 Leptothrix cholodnii SP-6 DNA polymerase subunit beta YP_001789397.1 390738 D 395495 CDS YP_001789398.1 171057049 6163661 391033..391371 1 NC_010524.1 PFAM: protein of unknown function DUF86; KEGG: afw:Anae109_0233 protein of unknown function DUF86; hypothetical protein 391371 6163661 Lcho_0358 Leptothrix cholodnii SP-6 hypothetical protein YP_001789398.1 391033 D 395495 CDS YP_001789399.1 171057050 6163662 391574..393883 1 NC_010524.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 393883 6163662 Lcho_0359 Leptothrix cholodnii SP-6 malic enzyme YP_001789399.1 391574 D 395495 CDS YP_001789400.1 171057051 6163663 393987..395417 1 NC_010524.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 395417 6163663 Lcho_0360 Leptothrix cholodnii SP-6 pyruvate kinase YP_001789400.1 393987 D 395495 CDS YP_001789401.1 171057052 6163664 395625..396689 1 NC_010524.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 396689 6163664 Lcho_0361 Leptothrix cholodnii SP-6 fructose-1,6-bisphosphate aldolase YP_001789401.1 395625 D 395495 CDS YP_001789402.1 171057053 6163665 396807..397715 1 NC_010524.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 397715 6163665 Lcho_0362 Leptothrix cholodnii SP-6 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_001789402.1 396807 D 395495 CDS YP_001789403.1 171057054 6162686 397741..398859 1 NC_010524.1 KEGG: mpt:Mpe_A0293 hypothetical protein; hypothetical protein 398859 6162686 Lcho_0363 Leptothrix cholodnii SP-6 hypothetical protein YP_001789403.1 397741 D 395495 CDS YP_001789404.1 171057055 6162687 complement(398884..399822) 1 NC_010524.1 PFAM: Thioredoxin domain; KEGG: mpt:Mpe_A0294 putative thioredoxin protein; thioredoxin domain-containing protein 399822 6162687 Lcho_0364 Leptothrix cholodnii SP-6 thioredoxin domain-containing protein YP_001789404.1 398884 R 395495 CDS YP_001789405.1 171057056 6162688 399871..400365 1 NC_010524.1 KEGG: pna:Pnap_3863 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 400365 6162688 Lcho_0365 Leptothrix cholodnii SP-6 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_001789405.1 399871 D 395495 CDS YP_001789406.1 171057057 6162689 400365..401585 1 NC_010524.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 401585 6162689 Lcho_0366 Leptothrix cholodnii SP-6 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_001789406.1 400365 D 395495 CDS YP_001789407.1 171057058 6162690 401600..402640 1 NC_010524.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: mpt:Mpe_A0297 hypothetical protein; Sua5/YciO/YrdC/YwlC family protein 402640 6162690 Lcho_0367 Leptothrix cholodnii SP-6 Sua5/YciO/YrdC/YwlC family protein YP_001789407.1 401600 D 395495 CDS YP_001789408.1 171057059 6162691 402690..403679 1 NC_010524.1 KEGG: mpt:Mpe_A0298 hypothetical protein; hypothetical protein 403679 6162691 Lcho_0368 Leptothrix cholodnii SP-6 hypothetical protein YP_001789408.1 402690 D 395495 CDS YP_001789409.1 171057060 6163775 complement(403715..405139) 1 NC_010524.1 KEGG: ajs:Ajs_3939 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 405139 6163775 Lcho_0369 Leptothrix cholodnii SP-6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_001789409.1 403715 R 395495 CDS YP_001789410.1 171057061 6163776 405334..406080 1 NC_010524.1 PFAM: peptidase M22 glycoprotease; KEGG: mpt:Mpe_A0301 putative transmembrane protein; peptidase M22 glycoprotease 406080 6163776 Lcho_0370 Leptothrix cholodnii SP-6 peptidase M22 glycoprotease YP_001789410.1 405334 D 395495 CDS YP_001789411.1 171057062 6163777 406088..406594 1 NC_010524.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: mpt:Mpe_A0302 putative ribosomal-protein acetyltransferase; ribosomal-protein-alanine acetyltransferase 406594 6163777 Lcho_0371 Leptothrix cholodnii SP-6 ribosomal-protein-alanine acetyltransferase YP_001789411.1 406088 D 395495 CDS YP_001789412.1 171057063 6163778 406581..407465 1 NC_010524.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: mpt:Mpe_A0303 putative DNA polymerase-related protein, bacteriophage-type; phage SPO1 DNA polymerase-like protein 407465 6163778 Lcho_0372 Leptothrix cholodnii SP-6 phage SPO1 DNA polymerase-like protein YP_001789412.1 406581 D 395495 CDS YP_001789413.1 171057064 6163779 complement(407485..408567) 1 NC_010524.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: mpt:Mpe_A0305 transport protein; Mg2 transporter protein CorA family protein 408567 6163779 Lcho_0373 Leptothrix cholodnii SP-6 Mg2 transporter protein CorA family protein YP_001789413.1 407485 R 395495 CDS YP_001789414.1 171057065 6163780 complement(408584..409591) 1 NC_010524.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 409591 6163780 Lcho_0374 Leptothrix cholodnii SP-6 delta-aminolevulinic acid dehydratase YP_001789414.1 408584 R 395495 CDS YP_001789415.1 171057066 6163865 complement(409947..410774) 1 NC_010524.1 KEGG: mpt:Mpe_A3221 hypothetical protein; hypothetical protein 410774 6163865 Lcho_0375 Leptothrix cholodnii SP-6 hypothetical protein YP_001789415.1 409947 R 395495 CDS YP_001789416.1 171057067 6163866 complement(410901..412268) 1 NC_010524.1 KEGG: ajs:Ajs_3626 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein 412268 6163866 Lcho_0376 Leptothrix cholodnii SP-6 signal recognition particle protein YP_001789416.1 410901 R 395495 CDS YP_001789417.1 171057068 6163867 412448..413215 1 NC_010524.1 PFAM: cytochrome c assembly protein; KEGG: mpt:Mpe_A3219 ABC-type uncharacterized transport system permease component-like protein; cytochrome c assembly protein 413215 6163867 Lcho_0377 Leptothrix cholodnii SP-6 cytochrome c assembly protein YP_001789417.1 412448 D 395495 CDS YP_001789418.1 171057069 6163868 413212..413472 1 NC_010524.1 KEGG: pfl:PFL_5308 hypothetical protein; hypothetical protein 413472 6163868 Lcho_0378 Leptothrix cholodnii SP-6 hypothetical protein YP_001789418.1 413212 D 395495 CDS YP_001789419.1 171057070 6163869 413479..415563 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A3217 signal transduction histidine kinase; histidine kinase 415563 6163869 Lcho_0379 Leptothrix cholodnii SP-6 histidine kinase YP_001789419.1 413479 D 395495 CDS YP_001789420.1 171057071 6163870 415560..417128 1 NC_010524.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mpt:Mpe_A3216 type IV pilus expression regulatory protein; two component sigma-54 specific Fis family transcriptional regulator 417128 6163870 Lcho_0380 Leptothrix cholodnii SP-6 two component sigma-54 specific Fis family transcriptional regulator YP_001789420.1 415560 D 395495 CDS YP_001789421.1 171057072 6163877 417125..417754 1 NC_010524.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: mpt:Mpe_A3215 N-acetyl-anhydromuranmyl-L-alanine amidase; N-acetyl-anhydromuranmyl-L-alanine amidase 417754 6163877 Lcho_0381 Leptothrix cholodnii SP-6 N-acetyl-anhydromuranmyl-L-alanine amidase YP_001789421.1 417125 D 395495 CDS YP_001789422.1 171057073 6163878 418116..420992 1 NC_010524.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 420992 6163878 Lcho_0382 Leptothrix cholodnii SP-6 ribonucleotide-diphosphate reductase subunit alpha YP_001789422.1 418116 D 395495 CDS YP_001789423.1 171057074 6163879 421096..422304 1 NC_010524.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 422304 6163879 Lcho_0383 Leptothrix cholodnii SP-6 ribonucleotide-diphosphate reductase subunit beta YP_001789423.1 421096 D 395495 CDS YP_001789424.1 171057075 6163880 423175..423552 1 NC_010524.1 PFAM: protein of unknown function DUF167; KEGG: pol:Bpro_1104 protein of unknown function DUF167; hypothetical protein 423552 6163880 Lcho_0384 Leptothrix cholodnii SP-6 hypothetical protein YP_001789424.1 423175 D 395495 CDS YP_001789425.1 171057076 6163881 complement(423587..423982) 1 NC_010524.1 hypothetical protein 423982 6163881 Lcho_0385 Leptothrix cholodnii SP-6 hypothetical protein YP_001789425.1 423587 R 395495 CDS YP_001789426.1 171057077 6163882 complement(424027..424935) 1 NC_010524.1 PFAM: PfkB domain protein; KEGG: mpt:Mpe_A3210 putative sugar kinase transferase protein; ribokinase-like domain-containing protein 424935 6163882 Lcho_0386 Leptothrix cholodnii SP-6 ribokinase-like domain-containing protein YP_001789426.1 424027 R 395495 CDS YP_001789427.1 171057078 6160570 complement(425260..425376) 1 NC_010524.1 hypothetical protein 425376 6160570 Lcho_0387 Leptothrix cholodnii SP-6 hypothetical protein YP_001789427.1 425260 R 395495 CDS YP_001789428.1 171057079 6160571 complement(425522..427894) 1 NC_010524.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold domain protein; KEGG: mca:MCA0985 sensory box protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 427894 6160571 Lcho_0388 Leptothrix cholodnii SP-6 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001789428.1 425522 R 395495 CDS YP_001789429.1 171057080 6160572 complement(428049..428807) 1 NC_010524.1 PFAM: glutamine amidotransferase class-II; KEGG: mpt:Mpe_A3628 putative glutamine amidotransferase; glutamine amidotransferase 428807 6160572 Lcho_0389 Leptothrix cholodnii SP-6 glutamine amidotransferase YP_001789429.1 428049 R 395495 CDS YP_001789430.1 171057081 6160573 complement(428830..430107) 1 NC_010524.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpt:Mpe_A0164 putative electron transfer oxidoreductase; monooxygenase FAD-binding 430107 6160573 Lcho_0390 Leptothrix cholodnii SP-6 monooxygenase FAD-binding YP_001789430.1 428830 R 395495 CDS YP_001789431.1 171057082 6160574 430207..432579 1 NC_010524.1 PFAM: Patatin; KEGG: mpt:Mpe_A0430 patatin-like phospholipase; patatin 432579 6160574 Lcho_0391 Leptothrix cholodnii SP-6 patatin YP_001789431.1 430207 D 395495 CDS YP_001789432.1 171057083 6160575 complement(432596..433588) 1 NC_010524.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pna:Pnap_0226 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 433588 6160575 Lcho_0392 Leptothrix cholodnii SP-6 LacI family transcriptional regulator YP_001789432.1 432596 R 395495 CDS YP_001789433.1 171057084 6164014 complement(433690..434487) 1 NC_010524.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 434487 engB 6164014 engB Leptothrix cholodnii SP-6 ribosome biogenesis GTP-binding protein YsxC YP_001789433.1 433690 R 395495 CDS YP_001789434.1 171057085 6164015 434538..435167 1 NC_010524.1 PFAM: cytochrome c class I; KEGG: mpt:Mpe_A0432 cytochrome c; cytochrome c class I 435167 6164015 Lcho_0394 Leptothrix cholodnii SP-6 cytochrome c class I YP_001789434.1 434538 D 395495 CDS YP_001789435.1 171057086 6164016 435283..435672 1 NC_010524.1 KEGG: mpt:Mpe_A0435 hypothetical protein; hypothetical protein 435672 6164016 Lcho_0395 Leptothrix cholodnii SP-6 hypothetical protein YP_001789435.1 435283 D 395495 CDS YP_001789436.1 171057087 6164017 435763..436767 1 NC_010524.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY 436767 6164017 Lcho_0396 Leptothrix cholodnii SP-6 putative sulfite oxidase subunit YedY YP_001789436.1 435763 D 395495 CDS YP_001789437.1 171057088 6164018 436769..437494 1 NC_010524.1 PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: mpt:Mpe_A0437 hypothetical protein; ferric reductase domain-containing protein 437494 6164018 Lcho_0397 Leptothrix cholodnii SP-6 ferric reductase domain-containing protein YP_001789437.1 436769 D 395495 CDS YP_001789438.1 171057089 6164019 437561..438190 1 NC_010524.1 PFAM: protein of unknown function DUF161; KEGG: mpt:Mpe_A3339 conserved hypothetical protein VC0940; hypothetical protein 438190 6164019 Lcho_0398 Leptothrix cholodnii SP-6 hypothetical protein YP_001789438.1 437561 D 395495 CDS YP_001789439.1 171057090 6161688 complement(438197..438961) 1 NC_010524.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: eba:ebA3865 hypothetical protein; Sel1 domain-containing protein 438961 6161688 Lcho_0399 Leptothrix cholodnii SP-6 Sel1 domain-containing protein YP_001789439.1 438197 R 395495 CDS YP_001789440.1 171057091 6161689 439096..439764 1 NC_010524.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 439764 6161689 Lcho_0400 Leptothrix cholodnii SP-6 lipoate-protein ligase B YP_001789440.1 439096 D 395495 CDS YP_001789441.1 171057092 6161690 439839..440834 1 NC_010524.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 440834 6161690 Lcho_0401 Leptothrix cholodnii SP-6 lipoyl synthase YP_001789441.1 439839 D 395495 CDS YP_001789442.1 171057093 6161691 440921..441844 1 NC_010524.1 KEGG: azo:azo3910 hypothetical secreted protein; hypothetical protein 441844 6161691 Lcho_0402 Leptothrix cholodnii SP-6 hypothetical protein YP_001789442.1 440921 D 395495 CDS YP_001789443.1 171057094 6161692 complement(441836..442753) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_1453 transcriptional regulator, LysR family; LysR family transcriptional regulator 442753 6161692 Lcho_0403 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001789443.1 441836 R 395495 CDS YP_001789444.1 171057095 6161693 442958..443707 1 NC_010524.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_1454 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 443707 6161693 Lcho_0404 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001789444.1 442958 D 395495 CDS YP_001789445.1 171057096 6161239 443860..444852 1 NC_010524.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pol:Bpro_1455 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit Dctp 444852 6161239 Lcho_0405 Leptothrix cholodnii SP-6 TRAP dicarboxylate transporter subunit Dctp YP_001789445.1 443860 D 395495 CDS YP_001789446.1 171057097 6161240 444932..445462 1 NC_010524.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dac:Daci_0730 tripartite ATP-independent periplasmic transporter DctQ component; tripartite ATP-independent periplasmic transporter DctQ 445462 6161240 Lcho_0406 Leptothrix cholodnii SP-6 tripartite ATP-independent periplasmic transporter DctQ YP_001789446.1 444932 D 395495 CDS YP_001789447.1 171057098 6161241 445478..446737 1 NC_010524.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pol:Bpro_1457 TRAP dicarboxylate transporter-DctM subunit; TRAP dicarboxylate transporter subunit DctM 446737 6161241 Lcho_0407 Leptothrix cholodnii SP-6 TRAP dicarboxylate transporter subunit DctM YP_001789447.1 445478 D 395495 CDS YP_001789448.1 171057099 6161242 446756..447640 1 NC_010524.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pol:Bpro_1458 xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 447640 6161242 Lcho_0408 Leptothrix cholodnii SP-6 xylose isomerase domain-containing protein YP_001789448.1 446756 D 395495 CDS YP_001789449.1 171057100 6161243 complement(447659..448678) 1 NC_010524.1 PFAM: putative sugar-binding domain protein; KEGG: vei:Veis_2041 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 448678 6161243 Lcho_0409 Leptothrix cholodnii SP-6 DeoR family transcriptional regulator YP_001789449.1 447659 R 395495 CDS YP_001789450.1 171057101 6161244 complement(448715..449164) 1 NC_010524.1 KEGG: vei:Veis_2042 sugar-phosphate isomerases, RpiB/LacA/LacB family; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; RpiB/LacA/LacB family sugar-phosphate isomerase 449164 6161244 Lcho_0410 Leptothrix cholodnii SP-6 RpiB/LacA/LacB family sugar-phosphate isomerase YP_001789450.1 448715 R 395495 CDS YP_001789451.1 171057102 6161060 449455..451221 1 NC_010524.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone; dihydroxyacetone kinase 451221 6161060 Lcho_0411 Leptothrix cholodnii SP-6 dihydroxyacetone kinase YP_001789451.1 449455 D 395495 CDS YP_001789452.1 171057103 6161061 451356..454517 1 NC_010524.1 TIGRFAM: transaldolase; transketolase; PFAM: Transaldolase; Transketolase domain protein; Transketolase central region; KEGG: azo:azo2836 transketolase; transketolase 454517 6161061 Lcho_0412 Leptothrix cholodnii SP-6 transketolase YP_001789452.1 451356 D 395495 CDS YP_001789453.1 171057104 6161062 454793..455476 1 NC_010524.1 PFAM: regulatory protein TetR; KEGG: pol:Bpro_4502 transcriptional regulator, TetR family; TetR family transcriptional regulator 455476 6161062 Lcho_0413 Leptothrix cholodnii SP-6 TetR family transcriptional regulator YP_001789453.1 454793 D 395495 CDS YP_001789454.1 171057105 6161063 455656..456216 1 NC_010524.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: aav:Aave_0752 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 456216 6161063 Lcho_0414 Leptothrix cholodnii SP-6 tripartite ATP-independent periplasmic transporter DctQ YP_001789454.1 455656 D 395495 CDS YP_001789455.1 171057106 6161064 456233..457513 1 NC_010524.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pol:Bpro_4500 TRAP dicarboxylate transporter-DctM subunit; TRAP dicarboxylate transporter subunit DctM 457513 6161064 Lcho_0415 Leptothrix cholodnii SP-6 TRAP dicarboxylate transporter subunit DctM YP_001789455.1 456233 D 395495 CDS YP_001789456.1 171057107 6161065 457631..458626 1 NC_010524.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pol:Bpro_4499 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit Dctp 458626 6161065 Lcho_0416 Leptothrix cholodnii SP-6 TRAP dicarboxylate transporter subunit Dctp YP_001789456.1 457631 D 395495 CDS YP_001789457.1 171057108 6163654 458696..459145 1 NC_010524.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 459145 6163654 Lcho_0417 Leptothrix cholodnii SP-6 3-dehydroquinate dehydratase YP_001789457.1 458696 D 395495 CDS YP_001789458.1 171057109 6163655 459189..461096 1 NC_010524.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; Xylose isomerase domain protein TIM barrel; KEGG: pna:Pnap_1560 4-hydroxyphenylpyruvate dioxygenase; xylose isomerase domain-containing protein 461096 6163655 Lcho_0418 Leptothrix cholodnii SP-6 xylose isomerase domain-containing protein YP_001789458.1 459189 D 395495 CDS YP_001789459.1 171057110 6163656 461152..461988 1 NC_010524.1 PFAM: UBA/THIF-type NAD/FAD binding protein; Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: pna:Pnap_1561 shikimate dehydrogenase; shikimate dehydrogenase 461988 6163656 Lcho_0419 Leptothrix cholodnii SP-6 shikimate dehydrogenase YP_001789459.1 461152 D 395495 CDS YP_001789460.1 171057111 6163657 complement(462037..462513) 1 NC_010524.1 PFAM: CBS domain containing protein; KEGG: pna:Pnap_1409 putative signal-transduction protein with CBS domains; signal-transduction protein 462513 6163657 Lcho_0420 Leptothrix cholodnii SP-6 signal-transduction protein YP_001789460.1 462037 R 395495 CDS YP_001789461.1 171057112 6163658 complement(462586..463482) 1 NC_010524.1 PFAM: Pirin domain protein; KEGG: mpt:Mpe_A0588 putative pirin-like protein; pirin domain-containing protein 463482 6163658 Lcho_0421 Leptothrix cholodnii SP-6 pirin domain-containing protein YP_001789461.1 462586 R 395495 CDS YP_001789462.1 171057113 6163659 complement(463507..464283) 1 NC_010524.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 464283 6163659 Lcho_0422 Leptothrix cholodnii SP-6 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_001789462.1 463507 R 395495 CDS YP_001789463.1 171057114 6163834 complement(464287..465024) 1 NC_010524.1 KEGG: mpt:Mpe_A3573 putative proline-rich protein; hypothetical protein 465024 6163834 Lcho_0423 Leptothrix cholodnii SP-6 hypothetical protein YP_001789463.1 464287 R 395495 CDS YP_001789464.1 171057115 6163835 complement(465061..466746) 1 NC_010524.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mpt:Mpe_A3572 putative long-chain-fatty-acid--CoA ligase protein; AMP-dependent synthetase and ligase 466746 6163835 Lcho_0424 Leptothrix cholodnii SP-6 AMP-dependent synthetase and ligase YP_001789464.1 465061 R 395495 CDS YP_001789465.1 171057116 6163836 complement(466921..468345) 1 NC_010524.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: pol:Bpro_4544 NAD(P) transhydrogenase, beta subunit; NAD(P)(+) transhydrogenase 468345 6163836 Lcho_0425 Leptothrix cholodnii SP-6 NAD(P)(+) transhydrogenase YP_001789465.1 466921 R 395495 CDS YP_001789466.1 171057117 6163837 complement(468346..468666) 1 NC_010524.1 KEGG: mpt:Mpe_A3570 NAD(P) transhydrogenase, subunit alpha part 2; NAD(P) transhydrogenase subunit alpha part 2 468666 6163837 Lcho_0426 Leptothrix cholodnii SP-6 NAD(P) transhydrogenase subunit alpha part 2 YP_001789466.1 468346 R 395495 CDS YP_001789467.1 171057118 6163838 complement(468669..469811) 1 NC_010524.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: pna:Pnap_3800 NAD(P)(+) transhydrogenase (AB-specific); NAD(P)(+) transhydrogenase 469811 6163838 Lcho_0427 Leptothrix cholodnii SP-6 NAD(P)(+) transhydrogenase YP_001789467.1 468669 R 395495 CDS YP_001789468.1 171057119 6163839 469926..470426 1 NC_010524.1 PFAM: NUDIX hydrolase; KEGG: mpt:Mpe_A3567 hypothetical protein; NUDIX hydrolase 470426 6163839 Lcho_0428 Leptothrix cholodnii SP-6 NUDIX hydrolase YP_001789468.1 469926 D 395495 CDS YP_001789469.1 171057120 6163871 complement(470410..471552) 1 NC_010524.1 PFAM: glycosyl transferase family 9; KEGG: reu:Reut_B4386 lipopolysaccharide heptosyltransferase II; glycosyl transferase family protein 471552 6163871 Lcho_0429 Leptothrix cholodnii SP-6 glycosyl transferase family protein YP_001789469.1 470410 R 395495 CDS YP_001789470.1 171057121 6163872 471680..471919 1 NC_010524.1 SMART: zinc finger CDGSH-type domain protein; KEGG: mag:amb4007 hypothetical protein; zinc finger CDGSH-type domain-containing protein 471919 6163872 Lcho_0430 Leptothrix cholodnii SP-6 zinc finger CDGSH-type domain-containing protein YP_001789470.1 471680 D 395495 CDS YP_001789471.1 171057122 6163873 471958..473100 1 NC_010524.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 473100 mnmA 6163873 mnmA Leptothrix cholodnii SP-6 tRNA-specific 2-thiouridylase MnmA YP_001789471.1 471958 D 395495 CDS YP_001789472.1 171057123 6163874 complement(473111..474415) 1 NC_010524.1 KEGG: pna:Pnap_1118 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969; fumarylacetoacetase 474415 6163874 Lcho_0432 Leptothrix cholodnii SP-6 fumarylacetoacetase YP_001789472.1 473111 R 395495 CDS YP_001789473.1 171057124 6163875 complement(474412..474951) 1 NC_010524.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pna:Pnap_1119 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 474951 6163875 Lcho_0433 Leptothrix cholodnii SP-6 glyoxalase/bleomycin resistance protein/dioxygenase YP_001789473.1 474412 R 395495 CDS YP_001789474.1 171057125 6163876 complement(474963..476039) 1 NC_010524.1 KEGG: pna:Pnap_1120 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 476039 6163876 Lcho_0434 Leptothrix cholodnii SP-6 4-hydroxyphenylpyruvate dioxygenase YP_001789474.1 474963 R 395495 CDS YP_001789475.1 171057126 6164111 complement(476086..476610) 1 NC_010524.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: rme:Rmet_1059 transferase hexapeptide repeat; hexapaptide repeat-containing transferase 476610 6164111 Lcho_0435 Leptothrix cholodnii SP-6 hexapaptide repeat-containing transferase YP_001789475.1 476086 R 395495 CDS YP_001789476.1 171057127 6164112 complement(476618..477631) 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: dac:Daci_3139 hypothetical protein; hypothetical protein 477631 6164112 Lcho_0436 Leptothrix cholodnii SP-6 hypothetical protein YP_001789476.1 476618 R 395495 CDS YP_001789477.1 171057128 6164113 complement(477684..478862) 1 NC_010524.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pna:Pnap_1122 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 478862 6164113 Lcho_0437 Leptothrix cholodnii SP-6 L-carnitine dehydratase/bile acid-inducible protein F YP_001789477.1 477684 R 395495 CDS YP_001789478.1 171057129 6164114 complement(478933..479877) 1 NC_010524.1 PFAM: pyruvate carboxyltransferase; KEGG: pna:Pnap_1123 pyruvate carboxyltransferase; pyruvate carboxyltransferase 479877 6164114 Lcho_0438 Leptothrix cholodnii SP-6 pyruvate carboxyltransferase YP_001789478.1 478933 R 395495 CDS YP_001789479.1 171057130 6164115 480015..480971 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_6279 transcriptional regulator, LysR family; LysR family transcriptional regulator 480971 6164115 Lcho_0439 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001789479.1 480015 D 395495 CDS YP_001789480.1 171057131 6164116 481133..481936 1 NC_010524.1 TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: sme:SMb20586 putative transcriptional regulator, IclR family protein; IclR family transcriptional regulator 481936 6164116 Lcho_0440 Leptothrix cholodnii SP-6 IclR family transcriptional regulator YP_001789480.1 481133 D 395495 CDS YP_001789481.1 171057132 6160773 482023..483222 1 NC_010524.1 catalyzes the formation of protocatechuate from 4-hydroxybenzoate; 4-hydroxybenzoate 3-monooxygenase 483222 6160773 Lcho_0441 Leptothrix cholodnii SP-6 4-hydroxybenzoate 3-monooxygenase YP_001789481.1 482023 D 395495 CDS YP_001789482.1 171057133 6160774 483230..484984 1 NC_010524.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bpt:Bpet3318 putative sulfate permease; sulfate transporter 484984 6160774 Lcho_0442 Leptothrix cholodnii SP-6 sulfate transporter YP_001789482.1 483230 D 395495 CDS YP_001789483.1 171057134 6160775 485051..485932 1 NC_010524.1 KEGG: mpt:Mpe_A2032 hypothetical protein; hypothetical protein 485932 6160775 Lcho_0443 Leptothrix cholodnii SP-6 hypothetical protein YP_001789483.1 485051 D 395495 CDS YP_001789484.1 171057135 6160776 485970..486392 1 NC_010524.1 PFAM: thioesterase superfamily protein; KEGG: azo:azo2495 probable thiesterase; 4-hydroxybenzoyl-CoA thioesterase 486392 6160776 Lcho_0444 Leptothrix cholodnii SP-6 4-hydroxybenzoyl-CoA thioesterase YP_001789484.1 485970 D 395495 CDS YP_001789485.1 171057136 6160777 complement(486408..487346) 1 NC_010524.1 PFAM: pyruvate carboxyltransferase; KEGG: pol:Bpro_4514 pyruvate carboxyltransferase; pyruvate carboxyltransferase 487346 6160777 Lcho_0445 Leptothrix cholodnii SP-6 pyruvate carboxyltransferase YP_001789485.1 486408 R 395495 CDS YP_001789486.1 171057137 6160778 complement(487366..488733) 1 NC_010524.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: scl:sce1470 MATE efflux family protein; multi anti extrusion protein MatE 488733 6160778 Lcho_0446 Leptothrix cholodnii SP-6 multi anti extrusion protein MatE YP_001789486.1 487366 R 395495 CDS YP_001789487.1 171057138 6164099 489558..490070 1 NC_010524.1 KEGG: gvi:glr1249 hypothetical protein; hypothetical protein 490070 6164099 Lcho_0447 Leptothrix cholodnii SP-6 hypothetical protein YP_001789487.1 489558 D 395495 CDS YP_001789488.1 171057139 6164100 490114..490344 1 NC_010524.1 PFAM: protein of unknown function DUF1653; KEGG: xcv:XCV3888 hypothetical protein; hypothetical protein 490344 6164100 Lcho_0448 Leptothrix cholodnii SP-6 hypothetical protein YP_001789488.1 490114 D 395495 CDS YP_001789489.1 171057140 6164101 490407..491237 1 NC_010524.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: par:Psyc_0360 hypothetical protein; Sel1 domain-containing protein 491237 6164101 Lcho_0449 Leptothrix cholodnii SP-6 Sel1 domain-containing protein YP_001789489.1 490407 D 395495 CDS YP_001789490.1 171057141 6164102 491412..492782 1 NC_010524.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: pmy:Pmen_2247 chromate transporter, chromate ion transporter (CHR) family; chromate transporter 492782 6164102 Lcho_0450 Leptothrix cholodnii SP-6 chromate transporter YP_001789490.1 491412 D 395495 CDS YP_001789491.1 171057142 6164103 complement(492803..493855) 1 NC_010524.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: azc:AZC_3546 hypothetical protein; hypothetical protein 493855 6164103 Lcho_0451 Leptothrix cholodnii SP-6 hypothetical protein YP_001789491.1 492803 R 395495 CDS YP_001789492.1 171057143 6164104 complement(493864..494382) 1 NC_010524.1 PFAM: protein of unknown function DUF336; KEGG: bmu:Bmul_1674 protein of unknown function DUF336; hypothetical protein 494382 6164104 Lcho_0452 Leptothrix cholodnii SP-6 hypothetical protein YP_001789492.1 493864 R 395495 CDS YP_001789493.1 171057144 6163907 complement(494464..495702) 1 NC_010524.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: bpd:BURPS668_0335 N-acylglucosamine 2-epimerase family protein; N-acylglucosamine 2-epimerase 495702 6163907 Lcho_0453 Leptothrix cholodnii SP-6 N-acylglucosamine 2-epimerase YP_001789493.1 494464 R 395495 CDS YP_001789494.1 171057145 6163908 complement(495791..496810) 1 NC_010524.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_A4284 transcriptional regulator, LacI family; LacI family transcriptional regulator 496810 6163908 Lcho_0454 Leptothrix cholodnii SP-6 LacI family transcriptional regulator YP_001789494.1 495791 R 395495 CDS YP_001789495.1 171057146 6163909 497131..497292 1 NC_010524.1 hypothetical protein 497292 6163909 Lcho_0455 Leptothrix cholodnii SP-6 hypothetical protein YP_001789495.1 497131 D 395495 CDS YP_001789496.1 171057147 6163910 497640..497879 1 NC_010524.1 hypothetical protein 497879 6163910 Lcho_0456 Leptothrix cholodnii SP-6 hypothetical protein YP_001789496.1 497640 D 395495 CDS YP_001789497.1 171057148 6163911 complement(497929..498498) 1 NC_010524.1 PFAM: YceI family protein; KEGG: pna:Pnap_3578 YceI family protein; hypothetical protein 498498 6163911 Lcho_0457 Leptothrix cholodnii SP-6 hypothetical protein YP_001789497.1 497929 R 395495 CDS YP_001789498.1 171057149 6163912 complement(498553..499125) 1 NC_010524.1 PFAM: YceI family protein; KEGG: aav:Aave_3506 YceI family protein; hypothetical protein 499125 6163912 Lcho_0458 Leptothrix cholodnii SP-6 hypothetical protein YP_001789498.1 498553 R 395495 CDS YP_001789499.1 171057150 6160558 complement(499166..499735) 1 NC_010524.1 PFAM: cytochrome B561; KEGG: mpt:Mpe_A3506 putative cytochrome b-561 membrane protein; cytochrome B561 499735 6160558 Lcho_0459 Leptothrix cholodnii SP-6 cytochrome B561 YP_001789499.1 499166 R 395495 CDS YP_001789500.1 171057151 6160559 complement(499880..500839) 1 NC_010524.1 PFAM: regulatory protein MerR; KEGG: mpt:Mpe_A0238 hypothetical protein; MerR family transcriptional regulator 500839 6160559 Lcho_0460 Leptothrix cholodnii SP-6 MerR family transcriptional regulator YP_001789500.1 499880 R 395495 CDS YP_001789501.1 171057152 6160560 500997..501572 1 NC_010524.1 PFAM: glutathione peroxidase; KEGG: mpt:Mpe_A0237 putative glutathione peroxidase transmembrane protein; glutathione peroxidase 501572 6160560 Lcho_0461 Leptothrix cholodnii SP-6 glutathione peroxidase YP_001789501.1 500997 D 395495 CDS YP_001789502.1 171057153 6160561 501876..503195 1 NC_010524.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mpt:Mpe_A0236 putative dehydrogenase; amine oxidase 503195 6160561 Lcho_0462 Leptothrix cholodnii SP-6 amine oxidase YP_001789502.1 501876 D 395495 CDS YP_001789503.1 171057154 6160562 503192..504022 1 NC_010524.1 PFAM: protein of unknown function DUF1365; KEGG: mpt:Mpe_A0235 hypothetical protein; hypothetical protein 504022 6160562 Lcho_0463 Leptothrix cholodnii SP-6 hypothetical protein YP_001789503.1 503192 D 395495 CDS YP_001789504.1 171057155 6160563 504096..505361 1 NC_010524.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mpt:Mpe_A0234 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 505361 6160563 Lcho_0464 Leptothrix cholodnii SP-6 cyclopropane-fatty-acyl-phospholipid synthase YP_001789504.1 504096 D 395495 CDS YP_001789505.1 171057156 6160924 505445..506032 1 NC_010524.1 KEGG: mpt:Mpe_A0233 hypothetical protein; hypothetical protein 506032 6160924 Lcho_0465 Leptothrix cholodnii SP-6 hypothetical protein YP_001789505.1 505445 D 395495 CDS YP_001789506.1 171057157 6160925 506029..507315 1 NC_010524.1 KEGG: mpt:Mpe_A0232 sodium:galactoside symporter family protein; sodium:galactoside symporter family protein 507315 6160925 Lcho_0466 Leptothrix cholodnii SP-6 sodium:galactoside symporter family protein YP_001789506.1 506029 D 395495 CDS YP_001789507.1 171057158 6160926 507318..507866 1 NC_010524.1 KEGG: mpt:Mpe_A0231 lipoprotein, putative; putative lipoprotein 507866 6160926 Lcho_0467 Leptothrix cholodnii SP-6 putative lipoprotein YP_001789507.1 507318 D 395495 CDS YP_001789508.1 171057159 6160927 507876..508649 1 NC_010524.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_1455 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 508649 6160927 Lcho_0468 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001789508.1 507876 D 395495 CDS YP_001789509.1 171057160 6160928 508646..509095 1 NC_010524.1 KEGG: mpt:Mpe_A0229 hypothetical protein; hypothetical protein 509095 6160928 Lcho_0469 Leptothrix cholodnii SP-6 hypothetical protein YP_001789509.1 508646 D 395495 CDS YP_001789510.1 171057161 6160929 complement(509102..510064) 1 NC_010524.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: mpt:Mpe_A0227 transport protein; magnesium and cobalt transport protein CorA 510064 6160929 Lcho_0470 Leptothrix cholodnii SP-6 magnesium and cobalt transport protein CorA YP_001789510.1 509102 R 395495 CDS YP_001789511.1 171057162 6162944 510510..510857 1 NC_010524.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: mpt:Mpe_A0226 putative PTS system, EIIa component; sigma 54 modulation protein/30S ribosomal protein S30EA 510857 6162944 Lcho_0471 Leptothrix cholodnii SP-6 sigma 54 modulation protein/30S ribosomal protein S30EA YP_001789511.1 510510 D 395495 CDS YP_001789512.1 171057163 6162945 511078..511548 1 NC_010524.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: mpt:Mpe_A0225 putative nitrogen regulatory IIA protein; putative PTS IIA-like nitrogen-regulatory protein PtsN 511548 6162945 Lcho_0472 Leptothrix cholodnii SP-6 putative PTS IIA-like nitrogen-regulatory protein PtsN YP_001789512.1 511078 D 395495 CDS YP_001789513.1 171057164 6162946 511607..512584 1 NC_010524.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 512584 6162946 Lcho_0473 Leptothrix cholodnii SP-6 HPr kinase/phosphorylase YP_001789513.1 511607 D 395495 CDS YP_001789514.1 171057165 6162947 complement(512621..513052) 1 NC_010524.1 PFAM: ferric-uptake regulator; KEGG: mpt:Mpe_A0223 transcriptional regulator; ferric uptake regulator family protein 513052 6162947 Lcho_0474 Leptothrix cholodnii SP-6 ferric uptake regulator family protein YP_001789514.1 512621 R 395495 CDS YP_001789515.1 171057166 6162948 513161..513709 1 NC_010524.1 PFAM: SmpA/OmlA domain protein; KEGG: mpt:Mpe_A0222 small protein A (tmRNA-binding)-like protein; SmpA/OmlA domain-containing protein 513709 6162948 Lcho_0475 Leptothrix cholodnii SP-6 SmpA/OmlA domain-containing protein YP_001789515.1 513161 D 395495 CDS YP_001789516.1 171057167 6162949 513721..514530 1 NC_010524.1 PFAM: dihydrodipicolinate reductase; KEGG: pna:Pnap_3789 dihydrodipicolinate reductase; dihydrodipicolinate reductase 514530 6162949 Lcho_0476 Leptothrix cholodnii SP-6 dihydrodipicolinate reductase YP_001789516.1 513721 D 395495 CDS YP_001789517.1 171057168 6162095 514543..515244 1 NC_010524.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mpt:Mpe_A0220 putative transport-related membrane protein; MotA/TolQ/ExbB proton channel 515244 6162095 Lcho_0477 Leptothrix cholodnii SP-6 MotA/TolQ/ExbB proton channel YP_001789517.1 514543 D 395495 CDS YP_001789518.1 171057169 6162096 515226..515666 1 NC_010524.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mpt:Mpe_A0219 putative transport-related membrane protein; biopolymer transport protein ExbD/TolR 515666 6162096 Lcho_0478 Leptothrix cholodnii SP-6 biopolymer transport protein ExbD/TolR YP_001789518.1 515226 D 395495 CDS YP_001789519.1 171057170 6162097 515745..518408 1 NC_010524.1 TIGRFAM: leucyl-tRNA synthetase; KEGG: pol:Bpro_4605 leucyl-tRNA synthetase; leucyl-tRNA synthetase 518408 6162097 Lcho_0479 Leptothrix cholodnii SP-6 leucyl-tRNA synthetase YP_001789519.1 515745 D 395495 CDS YP_001789520.1 171057171 6162098 518405..518977 1 NC_010524.1 PFAM: Rare lipoprotein B; KEGG: mpt:Mpe_A0217 putative lipoprotein B precursor; rare lipoprotein B 518977 6162098 Lcho_0480 Leptothrix cholodnii SP-6 rare lipoprotein B YP_001789520.1 518405 D 395495 CDS YP_001789521.1 171057172 6162099 518987..520075 1 NC_010524.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 520075 holA 6162099 holA Leptothrix cholodnii SP-6 DNA polymerase III subunit delta YP_001789521.1 518987 D 395495 CDS YP_001789522.1 171057173 6162100 520250..520540 1 NC_010524.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 520540 groES 6162100 groES Leptothrix cholodnii SP-6 co-chaperonin GroES YP_001789522.1 520250 D 395495 CDS YP_001789523.1 171057174 6162089 520586..522235 1 NC_010524.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 522235 groEL 6162089 groEL Leptothrix cholodnii SP-6 chaperonin GroEL YP_001789523.1 520586 D 395495 CDS YP_001789524.1 171057175 6162090 complement(522307..524430) 1 NC_010524.1 TIGRFAM: methyltransferase FkbM family; KEGG: nmu:Nmul_A1173 methyltransferase FkbM; FkbM family methyltransferase 524430 6162090 Lcho_0484 Leptothrix cholodnii SP-6 FkbM family methyltransferase YP_001789524.1 522307 R 395495 CDS YP_001789525.1 171057176 6162091 complement(524537..524947) 1 NC_010524.1 PFAM: Fimbrial protein pilin; KEGG: mca:MCA1510 fimbrial protein; fimbrial protein pilin 524947 6162091 Lcho_0485 Leptothrix cholodnii SP-6 fimbrial protein pilin YP_001789525.1 524537 R 395495 CDS YP_001789526.1 171057177 6162092 complement(525113..526558) 1 NC_010524.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mca:MCA1511 TPR domain protein; hypothetical protein 526558 6162092 Lcho_0486 Leptothrix cholodnii SP-6 hypothetical protein YP_001789526.1 525113 R 395495 CDS YP_001789527.1 171057178 6162093 complement(526855..528555) 1 NC_010524.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mca:MCA1512 TPR domain protein; hypothetical protein 528555 6162093 Lcho_0487 Leptothrix cholodnii SP-6 hypothetical protein YP_001789527.1 526855 R 395495 CDS YP_001789528.1 171057179 6162094 complement(528779..529114) 1 NC_010524.1 hypothetical protein 529114 6162094 Lcho_0488 Leptothrix cholodnii SP-6 hypothetical protein YP_001789528.1 528779 R 395495 CDS YP_001789529.1 171057180 6160355 529236..531053 1 NC_010524.1 PFAM: O-antigen polymerase; KEGG: mpt:Mpe_A0063 O-antigen polymerase; O-antigen polymerase 531053 6160355 Lcho_0489 Leptothrix cholodnii SP-6 O-antigen polymerase YP_001789529.1 529236 D 395495 CDS YP_001789530.1 171057181 6160356 531100..532614 1 NC_010524.1 PFAM: AAA-4 family protein; KEGG: neu:NE0383 hypothetical protein; putative transcriptional regulator 532614 6160356 Lcho_0490 Leptothrix cholodnii SP-6 putative transcriptional regulator YP_001789530.1 531100 D 395495 CDS YP_001789531.1 171057182 6160357 complement(532644..533078) 1 NC_010524.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: mpt:Mpe_A0062 molybdenum cofactor biosynthesis protein; molybdenum cofactor biosynthesis protein C 533078 6160357 Lcho_0491 Leptothrix cholodnii SP-6 molybdenum cofactor biosynthesis protein C YP_001789531.1 532644 R 395495 CDS YP_001789532.1 171057183 6160358 533233..534894 1 NC_010524.1 PFAM: peptidase M48 Ste24p; KEGG: mpt:Mpe_A0060 conserved hypothetical signal peptide protein; peptidase M48 Ste24p 534894 6160358 Lcho_0492 Leptothrix cholodnii SP-6 peptidase M48 Ste24p YP_001789532.1 533233 D 395495 CDS YP_001789533.1 171057184 6160359 complement(534928..535296) 1 NC_010524.1 PFAM: membrane protein of unknown function; KEGG: mpt:Mpe_A0059 putative transmembrane protein; membrane protein 535296 6160359 Lcho_0493 Leptothrix cholodnii SP-6 membrane protein YP_001789533.1 534928 R 395495 CDS YP_001789534.1 171057185 6160360 complement(535400..536293) 1 NC_010524.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 536293 6160360 Lcho_0494 Leptothrix cholodnii SP-6 succinyl-CoA synthetase subunit alpha YP_001789534.1 535400 R 395495 CDS YP_001789535.1 171057186 6161817 complement(536311..537471) 1 NC_010524.1 KEGG: pna:Pnap_3953 succinyl-CoA synthetase, beta subunit; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; succinyl-CoA synthetase subunit beta 537471 6161817 Lcho_0495 Leptothrix cholodnii SP-6 succinyl-CoA synthetase subunit beta YP_001789535.1 536311 R 395495 CDS YP_001789536.1 171057187 6161818 complement(537626..538099) 1 NC_010524.1 PFAM: regulatory protein RecX; KEGG: pol:Bpro_4684 regulatory protein RecX; regulatory protein RecX 538099 6161818 Lcho_0496 Leptothrix cholodnii SP-6 regulatory protein RecX YP_001789536.1 537626 R 395495 CDS YP_001789537.1 171057188 6161819 complement(538139..539200) 1 NC_010524.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 539200 recA 6161819 recA Leptothrix cholodnii SP-6 recombinase A YP_001789537.1 538139 R 395495 CDS YP_001789538.1 171057189 6161820 539365..540036 1 NC_010524.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mpt:Mpe_A0076 response regulator transcription regulatory protein; two component transcriptional regulator 540036 6161820 Lcho_0498 Leptothrix cholodnii SP-6 two component transcriptional regulator YP_001789538.1 539365 D 395495 CDS YP_001789539.1 171057190 6161821 540079..541635 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: mpt:Mpe_A0077 putative transmembrane sensor histidine kinase transcription regulator protein; histidine kinase 541635 6161821 Lcho_0499 Leptothrix cholodnii SP-6 histidine kinase YP_001789539.1 540079 D 395495 CDS YP_001789540.1 171057191 6161822 complement(541651..542805) 1 NC_010524.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: mpt:Mpe_A0079 putative rod shape-determining transmembrane protein; rod shape-determining protein RodA 542805 6161822 Lcho_0500 Leptothrix cholodnii SP-6 rod shape-determining protein RodA YP_001789540.1 541651 R 395495 CDS YP_001789541.1 171057192 6162128 complement(542802..544841) 1 NC_010524.1 KEGG: mpt:Mpe_A0080 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 544841 6162128 Lcho_0501 Leptothrix cholodnii SP-6 penicillin-binding protein 2 YP_001789541.1 542802 R 395495 CDS YP_001789542.1 171057193 6162129 complement(544849..545355) 1 NC_010524.1 TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; KEGG: mpt:Mpe_A0081 putative rod shape-determining MreD transmembrane protein; rod shape-determining protein MreD 545355 6162129 Lcho_0502 Leptothrix cholodnii SP-6 rod shape-determining protein MreD YP_001789542.1 544849 R 395495 CDS YP_001789543.1 171057194 6162130 complement(545475..546413) 1 NC_010524.1 TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: mpt:Mpe_A0082 putative rod shape-determining MreC transmembrane protein; rod shape-determining protein MreC 546413 6162130 Lcho_0503 Leptothrix cholodnii SP-6 rod shape-determining protein MreC YP_001789543.1 545475 R 395495 CDS YP_001789544.1 171057195 6162131 complement(546468..547517) 1 NC_010524.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 547517 6162131 Lcho_0504 Leptothrix cholodnii SP-6 rod shape-determining protein MreB YP_001789544.1 546468 R 395495 CDS YP_001789545.1 171057196 6162132 547854..548153 1 NC_010524.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 548153 gatC 6162132 gatC Leptothrix cholodnii SP-6 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_001789545.1 547854 D 395495 CDS YP_001789546.1 171057197 6162133 548162..549655 1 NC_010524.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 549655 gatA 6162133 gatA Leptothrix cholodnii SP-6 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_001789546.1 548162 D 395495 CDS YP_001789547.1 171057198 6162300 549655..549774 1 NC_010524.1 hypothetical protein 549774 6162300 Lcho_0507 Leptothrix cholodnii SP-6 hypothetical protein YP_001789547.1 549655 D 395495 CDS YP_001789548.1 171057199 6162301 549771..551069 1 NC_010524.1 KEGG: mpt:Mpe_A2203 putative chaperone protein; putative chaperone protein 551069 6162301 Lcho_0508 Leptothrix cholodnii SP-6 putative chaperone protein YP_001789548.1 549771 D 395495 CDS YP_001789549.1 171057200 6162302 complement(551092..553317) 1 NC_010524.1 KEGG: dar:Daro_4100 hypothetical protein; hypothetical protein 553317 6162302 Lcho_0509 Leptothrix cholodnii SP-6 hypothetical protein YP_001789549.1 551092 R 395495 CDS YP_001789550.1 171057201 6162303 553422..554390 1 NC_010524.1 KEGG: mpt:Mpe_A3644 hypothetical protein; hypothetical protein 554390 6162303 Lcho_0510 Leptothrix cholodnii SP-6 hypothetical protein YP_001789550.1 553422 D 395495 CDS YP_001789551.1 171057202 6162304 554429..555658 1 NC_010524.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_1896 drug resistance transporter, Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 555658 6162304 Lcho_0511 Leptothrix cholodnii SP-6 Bcr/CflA subfamily drug resistance transporter YP_001789551.1 554429 D 395495 CDS YP_001789552.1 171057203 6162305 555767..556879 1 NC_010524.1 PFAM: carbonic anhydrase; KEGG: dar:Daro_3922 carbonic anhydrase, eukaryotic; carbonate dehydratase 556879 6162305 Lcho_0512 Leptothrix cholodnii SP-6 carbonate dehydratase YP_001789552.1 555767 D 395495 CDS YP_001789553.1 171057204 6162484 557202..557642 1 NC_010524.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 557642 6162484 Lcho_0513 Leptothrix cholodnii SP-6 cell division protein MraZ YP_001789553.1 557202 D 395495 CDS YP_001789554.1 171057205 6162485 557648..558625 1 NC_010524.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: mpt:Mpe_A0454 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 558625 mraW 6162485 mraW Leptothrix cholodnii SP-6 S-adenosyl-methyltransferase MraW YP_001789554.1 557648 D 395495 CDS YP_001789555.1 171057206 6162486 558622..558930 1 NC_010524.1 PFAM: cell division protein FtsL; KEGG: pol:Bpro_1068 cell division protein, FtsL -like; cell division protein FtsL 558930 6162486 Lcho_0515 Leptothrix cholodnii SP-6 cell division protein FtsL YP_001789555.1 558622 D 395495 CDS YP_001789556.1 171057207 6162487 558930..560774 1 NC_010524.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: mpt:Mpe_A0456 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 560774 6162487 Lcho_0516 Leptothrix cholodnii SP-6 peptidoglycan glycosyltransferase YP_001789556.1 558930 D 395495 CDS YP_001789557.1 171057208 6162488 560774..562315 1 NC_010524.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 562315 murE 6162488 murE Leptothrix cholodnii SP-6 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_001789557.1 560774 D 395495 CDS YP_001789558.1 171057209 6162489 562312..563781 1 NC_010524.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mpt:Mpe_A0458 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamino pimelate--D-alanyl-D-alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 563781 6162489 Lcho_0518 Leptothrix cholodnii SP-6 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase YP_001789558.1 562312 D 395495 CDS YP_001789559.1 171057210 6162860 563771..564952 1 NC_010524.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 564952 mraY 6162860 mraY Leptothrix cholodnii SP-6 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001789559.1 563771 D 395495 CDS YP_001789560.1 171057211 6162861 564960..566813 1 NC_010524.1 TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mpt:Mpe_A0460 UDP-N-acetylmuramoylalanine--D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 566813 6162861 Lcho_0520 Leptothrix cholodnii SP-6 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_001789560.1 564960 D 395495 CDS YP_001789561.1 171057212 6162862 566872..568140 1 NC_010524.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: mpt:Mpe_A0461 cell division protein FtsW; cell division protein FtsW 568140 6162862 Lcho_0521 Leptothrix cholodnii SP-6 cell division protein FtsW YP_001789561.1 566872 D 395495 CDS YP_001789562.1 171057213 6162863 568137..569249 1 NC_010524.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 569249 murG 6162863 murG Leptothrix cholodnii SP-6 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_001789562.1 568137 D 395495 CDS YP_001789563.1 171057214 6162864 569246..570655 1 NC_010524.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 570655 murC 6162864 murC Leptothrix cholodnii SP-6 UDP-N-acetylmuramate--L-alanine ligase YP_001789563.1 569246 D 395495 CDS YP_001789564.1 171057215 6162865 570652..571641 1 NC_010524.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 571641 ddl 6162865 ddl Leptothrix cholodnii SP-6 D-alanine--D-alanine ligase YP_001789564.1 570652 D 395495 CDS YP_001789565.1 171057216 6161278 571669..572472 1 NC_010524.1 PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: mpt:Mpe_A0465 cell division protein FtsQ; polypeptide-transport-associated domain-containing protein 572472 6161278 Lcho_0525 Leptothrix cholodnii SP-6 polypeptide-transport-associated domain-containing protein YP_001789565.1 571669 D 395495 CDS YP_001789566.1 171057217 6161279 572509..573735 1 NC_010524.1 PFAM: cell division protein FtsA; KEGG: mpt:Mpe_A0466 putative cell division protein FtsA; cell division protein FtsA 573735 6161279 Lcho_0526 Leptothrix cholodnii SP-6 cell division protein FtsA YP_001789566.1 572509 D 395495 CDS YP_001789567.1 171057218 6161280 573889..575106 1 NC_010524.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: mpt:Mpe_A0467 cell division protein FtsZ; cell division protein FtsZ 575106 6161280 Lcho_0527 Leptothrix cholodnii SP-6 cell division protein FtsZ YP_001789567.1 573889 D 395495 CDS YP_001789568.1 171057219 6161281 575241..576176 1 NC_010524.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 576176 lpxC 6161281 lpxC Leptothrix cholodnii SP-6 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_001789568.1 575241 D 395495 CDS YP_001789569.1 171057220 6161282 576199..576372 1 NC_010524.1 KEGG: mpt:Mpe_A0469 hypothetical protein; hypothetical protein 576372 6161282 Lcho_0529 Leptothrix cholodnii SP-6 hypothetical protein YP_001789569.1 576199 D 395495 CDS YP_001789570.1 171057221 6161283 complement(576416..578770) 1 NC_010524.1 KEGG: xcv:XCV1929 putative C-di-GMP phosphodiesterase or signal transduction protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 578770 6161283 Lcho_0530 Leptothrix cholodnii SP-6 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001789570.1 576416 R 395495 CDS YP_001789571.1 171057222 6160748 complement(578838..579389) 1 NC_010524.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 579389 ruvC 6160748 ruvC Leptothrix cholodnii SP-6 Holliday junction resolvase YP_001789571.1 578838 R 395495 CDS YP_001789572.1 171057223 6160749 complement(579463..581070) 1 NC_010524.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 581070 purH 6160749 purH Leptothrix cholodnii SP-6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_001789572.1 579463 R 395495 CDS YP_001789573.1 171057224 6160750 complement(581142..581378) 1 NC_010524.1 PFAM: helix-turn-helix Fis-type; KEGG: pol:Bpro_1131 transcriptional regulator, fis family; Fis family transcriptional regulator 581378 6160750 Lcho_0533 Leptothrix cholodnii SP-6 Fis family transcriptional regulator YP_001789573.1 581142 R 395495 CDS YP_001789574.1 171057225 6160751 complement(581375..582415) 1 NC_010524.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; dihydroorotate dehydrogenase; KEGG: mpt:Mpe_A0486 tRNA-dihydrouridine synthase B; NifR3 family TIM-barrel protein 582415 6160751 Lcho_0534 Leptothrix cholodnii SP-6 NifR3 family TIM-barrel protein YP_001789574.1 581375 R 395495 CDS YP_001789575.1 171057226 6160752 582521..583003 1 NC_010524.1 KEGG: mpt:Mpe_A0487 putative transmembrane protein; putative transmembrane protein 583003 6160752 Lcho_0535 Leptothrix cholodnii SP-6 putative transmembrane protein YP_001789575.1 582521 D 395495 CDS YP_001789576.1 171057227 6160753 583104..584618 1 NC_010524.1 PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: azo:azo3546 probable carboxypeptidase TAQ; carboxypeptidase Taq 584618 6160753 Lcho_0536 Leptothrix cholodnii SP-6 carboxypeptidase Taq YP_001789576.1 583104 D 395495 CDS YP_001789577.1 171057228 6161331 complement(584714..586636) 1 NC_010524.1 KEGG: pcr:Pcryo_1046 protein of unknown function DUF11; hypothetical protein 586636 6161331 Lcho_0537 Leptothrix cholodnii SP-6 hypothetical protein YP_001789577.1 584714 R 395495 CDS YP_001789578.1 171057229 6161332 complement(586655..586942) 1 NC_010524.1 KEGG: xau:Xaut_4604 hypothetical protein; hypothetical protein 586942 6161332 Lcho_0538 Leptothrix cholodnii SP-6 hypothetical protein YP_001789578.1 586655 R 395495 CDS YP_001789579.1 171057230 6161333 587111..588022 1 NC_010524.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 588022 6161333 Lcho_0539 Leptothrix cholodnii SP-6 acetylglutamate kinase YP_001789579.1 587111 D 395495 CDS YP_001789580.1 171057231 6161334 588092..588661 1 NC_010524.1 PFAM: protein of unknown function DUF820; KEGG: hha:Hhal_1924 protein of unknown function DUF820; hypothetical protein 588661 6161334 Lcho_0540 Leptothrix cholodnii SP-6 hypothetical protein YP_001789580.1 588092 D 395495 CDS YP_001789581.1 171057232 6161335 588672..589373 1 NC_010524.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mpt:Mpe_A0500 hypothetical protein; pyrimidine 5'-nucleotidase 589373 6161335 Lcho_0541 Leptothrix cholodnii SP-6 pyrimidine 5'-nucleotidase YP_001789581.1 588672 D 395495 CDS YP_001789582.1 171057233 6161336 589373..590017 1 NC_010524.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 590017 slmA 6161336 slmA Leptothrix cholodnii SP-6 nucleoid occlusion protein YP_001789582.1 589373 D 395495 CDS YP_001789583.1 171057234 6159807 590059..590991 1 NC_010524.1 PFAM: protein of unknown function DUF815; KEGG: ajs:Ajs_0798 protein of unknown function DUF815; hypothetical protein 590991 6159807 Lcho_0543 Leptothrix cholodnii SP-6 hypothetical protein YP_001789583.1 590059 D 395495 CDS YP_001789584.1 171057235 6159808 590984..591484 1 NC_010524.1 PFAM: NUDIX hydrolase; KEGG: rfr:Rfer_2908 NUDIX hydrolase; NUDIX hydrolase 591484 6159808 Lcho_0544 Leptothrix cholodnii SP-6 NUDIX hydrolase YP_001789584.1 590984 D 395495 CDS YP_001789585.1 171057236 6159809 complement(591501..591707) 1 NC_010524.1 PFAM: protein of unknown function DUF329; KEGG: ajs:Ajs_0800 protein of unknown function DUF329; hypothetical protein 591707 6159809 Lcho_0545 Leptothrix cholodnii SP-6 hypothetical protein YP_001789585.1 591501 R 395495 CDS YP_001789586.1 171057237 6159810 complement(591740..592495) 1 NC_010524.1 PFAM: protein of unknown function DUF1342; KEGG: mpt:Mpe_A0505 hypothetical protein; hypothetical protein 592495 6159810 Lcho_0546 Leptothrix cholodnii SP-6 hypothetical protein YP_001789586.1 591740 R 395495 CDS YP_001789587.1 171057238 6159811 complement(592576..593190) 1 NC_010524.1 KEGG: mpt:Mpe_A0506 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 593190 6159811 Lcho_0547 Leptothrix cholodnii SP-6 dephospho-CoA kinase YP_001789587.1 592576 R 395495 CDS YP_001789588.1 171057239 6159812 complement(593202..594149) 1 NC_010524.1 PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: mpt:Mpe_A0507 signal peptidase; peptidase A24A domain-containing protein 594149 6159812 Lcho_0548 Leptothrix cholodnii SP-6 peptidase A24A domain-containing protein YP_001789588.1 593202 R 395495 CDS YP_001789589.1 171057240 6164124 complement(594158..595384) 1 NC_010524.1 PFAM: type II secretion system protein; KEGG: mpt:Mpe_A0508 pilus tip-associated protein; type II secretion system protein 595384 6164124 Lcho_0549 Leptothrix cholodnii SP-6 type II secretion system protein YP_001789589.1 594158 R 395495 CDS YP_001789590.1 171057241 6164125 complement(595435..597159) 1 NC_010524.1 KEGG: mpt:Mpe_A0509 pilus biogenesis ATPase; TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; type IV-A pilus assembly ATPase PilB 597159 6164125 Lcho_0550 Leptothrix cholodnii SP-6 type IV-A pilus assembly ATPase PilB YP_001789590.1 595435 R 395495 CDS YP_001789591.1 171057242 6164126 597526..599430 1 NC_010524.1 molecular chaperone; heat shock protein 90 599430 6164126 Lcho_0551 Leptothrix cholodnii SP-6 heat shock protein 90 YP_001789591.1 597526 D 395495 CDS YP_001789592.1 171057243 6164127 complement(599447..600529) 1 NC_010524.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 600529 6164127 Lcho_0552 Leptothrix cholodnii SP-6 serine/threonine protein kinase YP_001789592.1 599447 R 395495 CDS YP_001789593.1 171057244 6164128 complement(600561..601370) 1 NC_010524.1 KEGG: mpt:Mpe_A3159 hypothetical protein; hypothetical protein 601370 6164128 Lcho_0553 Leptothrix cholodnii SP-6 hypothetical protein YP_001789593.1 600561 R 395495 CDS YP_001789594.1 171057245 6164129 complement(601622..602323) 1 NC_010524.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpt:Mpe_A3158 hypothetical protein; N-acetyltransferase GCN5 602323 6164129 Lcho_0554 Leptothrix cholodnii SP-6 N-acetyltransferase GCN5 YP_001789594.1 601622 R 395495 CDS YP_001789595.1 171057246 6163358 complement(602524..603075) 1 NC_010524.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mpt:Mpe_A0111 single-strand binding protein; ssDNA-binding protein 603075 6163358 Lcho_0555 Leptothrix cholodnii SP-6 ssDNA-binding protein YP_001789595.1 602524 R 395495 CDS YP_001789596.1 171057247 6163359 603234..605213 1 NC_010524.1 KEGG: mpt:Mpe_A0108 putative ATP-dependent DNA helicase protein; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; ATP-dependent DNA helicase RecQ 605213 6163359 Lcho_0556 Leptothrix cholodnii SP-6 ATP-dependent DNA helicase RecQ YP_001789596.1 603234 D 395495 CDS YP_001789597.1 171057248 6163360 605340..606557 1 NC_010524.1 PFAM: Patatin; KEGG: mpt:Mpe_A0078 alpha-beta hydrolase superfamily esterase-like protein; patatin 606557 6163360 Lcho_0557 Leptothrix cholodnii SP-6 patatin YP_001789597.1 605340 D 395495 CDS YP_001789598.1 171057249 6163361 complement(606559..607404) 1 NC_010524.1 hypothetical protein 607404 6163361 Lcho_0558 Leptothrix cholodnii SP-6 hypothetical protein YP_001789598.1 606559 R 395495 CDS YP_001789599.1 171057250 6163362 complement(607453..607950) 1 NC_010524.1 KEGG: mpt:Mpe_A0107 hypothetical protein; hypothetical protein 607950 6163362 Lcho_0559 Leptothrix cholodnii SP-6 hypothetical protein YP_001789599.1 607453 R 395495 CDS YP_001789600.1 171057251 6163363 complement(607993..609234) 1 NC_010524.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: rfr:Rfer_2975 acetate kinase; acetate kinase 609234 6163363 Lcho_0560 Leptothrix cholodnii SP-6 acetate kinase YP_001789600.1 607993 R 395495 CDS YP_001789601.1 171057252 6162653 609487..610506 1 NC_010524.1 PFAM: basic membrane lipoprotein; KEGG: aha:AHA_0219 membrane lipoprotein; basic membrane lipoprotein 610506 6162653 Lcho_0561 Leptothrix cholodnii SP-6 basic membrane lipoprotein YP_001789601.1 609487 D 395495 CDS YP_001789602.1 171057253 6162654 610517..612157 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmw:Mmwyl1_0633 ABC transporter related; ABC transporter-like protein 612157 6162654 Lcho_0562 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001789602.1 610517 D 395495 CDS YP_001789603.1 171057254 6162655 612154..613257 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: mes:Meso_3653 inner-membrane translocator; inner-membrane translocator 613257 6162655 Lcho_0563 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001789603.1 612154 D 395495 CDS YP_001789604.1 171057255 6162656 613250..614224 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: atc:AGR_C_207 sugar ABC transporter, permease protein; inner-membrane translocator 614224 6162656 Lcho_0564 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001789604.1 613250 D 395495 CDS YP_001789605.1 171057256 6162657 complement(614257..615777) 1 NC_010524.1 PFAM: Aldehyde Dehydrogenase_; KEGG: rsh:Rsph17029_2952 aldehyde dehydrogenase; aldehyde dehydrogenase 615777 6162657 Lcho_0565 Leptothrix cholodnii SP-6 aldehyde dehydrogenase YP_001789605.1 614257 R 395495 CDS YP_001789606.1 171057257 6162658 complement(615808..616965) 1 NC_010524.1 PFAM: Saccharopine dehydrogenase; KEGG: pol:Bpro_4331 saccharopine dehydrogenase; saccharopine dehydrogenase 616965 6162658 Lcho_0566 Leptothrix cholodnii SP-6 saccharopine dehydrogenase YP_001789606.1 615808 R 395495 CDS YP_001789607.1 171057258 6163183 617211..617726 1 NC_010524.1 KEGG: afw:Anae109_0266 response regulator receiver; hypothetical protein 617726 6163183 Lcho_0567 Leptothrix cholodnii SP-6 hypothetical protein YP_001789607.1 617211 D 395495 CDS YP_001789608.1 171057259 6163184 617723..618043 1 NC_010524.1 hypothetical protein 618043 6163184 Lcho_0568 Leptothrix cholodnii SP-6 hypothetical protein YP_001789608.1 617723 D 395495 CDS YP_001789609.1 171057260 6163185 complement(618054..618806) 1 NC_010524.1 KEGG: bbt:BBta_6384 hypothetical protein; hypothetical protein 618806 6163185 Lcho_0569 Leptothrix cholodnii SP-6 hypothetical protein YP_001789609.1 618054 R 395495 CDS YP_001789610.1 171057261 6163186 618937..619554 1 NC_010524.1 PFAM: protein of unknown function DUF847; KEGG: xau:Xaut_3175 protein of unknown function DUF847; hypothetical protein 619554 6163186 Lcho_0570 Leptothrix cholodnii SP-6 hypothetical protein YP_001789610.1 618937 D 395495 CDS YP_001789611.1 171057262 6163187 619586..621280 1 NC_010524.1 KEGG: sse:Ssed_3749 hypothetical protein; hypothetical protein 621280 6163187 Lcho_0571 Leptothrix cholodnii SP-6 hypothetical protein YP_001789611.1 619586 D 395495 CDS YP_001789612.1 171057263 6160141 621758..622732 1 NC_010524.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mpt:Mpe_A0515 hypothetical protein; hypothetical protein 622732 6160141 Lcho_0572 Leptothrix cholodnii SP-6 hypothetical protein YP_001789612.1 621758 D 395495 CDS YP_001789613.1 171057264 6160142 complement(622738..623349) 1 NC_010524.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 623349 6160142 Lcho_0573 Leptothrix cholodnii SP-6 dinucleoside polyphosphate hydrolase YP_001789613.1 622738 R 395495 CDS YP_001789614.1 171057265 6160143 623452..625197 1 NC_010524.1 TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; YbaK/prolyl-tRNA synthetase associated region; KEGG: mpt:Mpe_A0517 prolyl-tRNA synthetase; prolyl-tRNA synthetase 625197 6160143 Lcho_0574 Leptothrix cholodnii SP-6 prolyl-tRNA synthetase YP_001789614.1 623452 D 395495 CDS YP_001789615.1 171057266 6160144 625278..625949 1 NC_010524.1 PFAM: Lytic transglycosylase catalytic; KEGG: aav:Aave_3669 lytic transglycosylase, catalytic; lytic transglycosylase catalytic subunit 625949 6160144 Lcho_0575 Leptothrix cholodnii SP-6 lytic transglycosylase catalytic subunit YP_001789615.1 625278 D 395495 CDS YP_001789616.1 171057267 6160145 complement(625975..626553) 1 NC_010524.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: mpt:Mpe_A0519 putative flavoprotein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 626553 6160145 Lcho_0576 Leptothrix cholodnii SP-6 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_001789616.1 625975 R 395495 CDS YP_001789617.1 171057268 6160146 complement(626558..626869) 1 NC_010524.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: rso:RSc2904 hypothetical protein; glutaredoxin-like protein 626869 6160146 Lcho_0577 Leptothrix cholodnii SP-6 glutaredoxin-like protein YP_001789617.1 626558 R 395495 CDS YP_001789618.1 171057269 6159948 complement(626993..627673) 1 NC_010524.1 KEGG: mpt:Mpe_A0521 hypothetical protein; hypothetical protein 627673 6159948 Lcho_0578 Leptothrix cholodnii SP-6 hypothetical protein YP_001789618.1 626993 R 395495 CDS YP_001789619.1 171057270 6159949 complement(627834..628676) 1 NC_010524.1 TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: vei:Veis_1555 modification methylase, HemK family; protein-(glutamine-N5) methyltransferase 628676 6159949 Lcho_0579 Leptothrix cholodnii SP-6 protein-(glutamine-N5) methyltransferase YP_001789619.1 627834 R 395495 CDS YP_001789620.1 171057271 6159950 complement(628673..629755) 1 NC_010524.1 TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: mpt:Mpe_A0523 peptide chain release factor 1; peptide chain release factor 1 629755 6159950 Lcho_0580 Leptothrix cholodnii SP-6 peptide chain release factor 1 YP_001789620.1 628673 R 395495 CDS YP_001789621.1 171057272 6159951 complement(629854..631161) 1 NC_010524.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 631161 hemA 6159951 hemA Leptothrix cholodnii SP-6 glutamyl-tRNA reductase YP_001789621.1 629854 R 395495 CDS YP_001789622.1 171057273 6159952 631292..631573 1 NC_010524.1 KEGG: mpt:Mpe_A0525 hypothetical protein; hypothetical protein 631573 6159952 Lcho_0582 Leptothrix cholodnii SP-6 hypothetical protein YP_001789622.1 631292 D 395495 CDS YP_001789623.1 171057274 6159953 complement(631600..632523) 1 NC_010524.1 PFAM: beta-lactamase domain protein; KEGG: ajs:Ajs_0515 beta-lactamase domain protein; beta-lactamase domain-containing protein 632523 6159953 Lcho_0583 Leptothrix cholodnii SP-6 beta-lactamase domain-containing protein YP_001789623.1 631600 R 395495 CDS YP_001789624.1 171057275 6159954 complement(632534..633943) 1 NC_010524.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 633943 6159954 Lcho_0584 Leptothrix cholodnii SP-6 (dimethylallyl)adenosine tRNA methylthiotransferase YP_001789624.1 632534 R 395495 CDS YP_001789625.1 171057276 6159887 634347..634991 1 NC_010524.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: mpt:Mpe_A0663 urease accessory protein; urease accessory protein UreG 634991 6159887 Lcho_0585 Leptothrix cholodnii SP-6 urease accessory protein UreG YP_001789625.1 634347 D 395495 CDS YP_001789626.1 171057277 6159888 complement(634998..635207) 1 NC_010524.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rso:RSc0349 putative bacterioferritin-associated ferredoxin protein; BFD/(2Fe-2S)-binding domain-containing protein 635207 6159888 Lcho_0586 Leptothrix cholodnii SP-6 BFD/(2Fe-2S)-binding domain-containing protein YP_001789626.1 634998 R 395495 CDS YP_001789627.1 171057278 6159889 complement(635341..635817) 1 NC_010524.1 TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: pol:Bpro_3046 bacterioferritin; bacterioferritin 635817 6159889 Lcho_0587 Leptothrix cholodnii SP-6 bacterioferritin YP_001789627.1 635341 R 395495 CDS YP_001789628.1 171057279 6159890 complement(635885..636907) 1 NC_010524.1 PFAM: peptidase S49; KEGG: mpt:Mpe_A0660 putative protease transmembrane protein; peptidase S49 636907 6159890 Lcho_0588 Leptothrix cholodnii SP-6 peptidase S49 YP_001789628.1 635885 R 395495 CDS YP_001789629.1 171057280 6159891 complement(636960..637340) 1 NC_010524.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mpt:Mpe_A0659 hypothetical protein; Rieske (2Fe-2S) domain-containing protein 637340 6159891 Lcho_0589 Leptothrix cholodnii SP-6 Rieske (2Fe-2S) domain-containing protein YP_001789629.1 636960 R 395495 CDS YP_001789630.1 171057281 6159699 complement(637381..638040) 1 NC_010524.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mpt:Mpe_A0658 haloacid dehalogenase-like hydrolase; HAD family hydrolase 638040 6159699 Lcho_0590 Leptothrix cholodnii SP-6 HAD family hydrolase YP_001789630.1 637381 R 395495 CDS YP_001789631.1 171057282 6159700 complement(638060..639028) 1 NC_010524.1 KEGG: mpt:Mpe_A0657 putative ribosomal large subunit pseudouridine synthase C protein; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 639028 6159700 Lcho_0591 Leptothrix cholodnii SP-6 RluA family pseudouridine synthase YP_001789631.1 638060 R 395495 CDS YP_001789632.1 171057283 6159701 639881..643057 1 NC_010524.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: mpt:Mpe_A0656 putative ribonuclease E (RNase E) protein; ribonuclease 643057 6159701 Lcho_0592 Leptothrix cholodnii SP-6 ribonuclease YP_001789632.1 639881 D 395495 CDS YP_001789633.1 171057284 6159702 complement(643161..644264) 1 NC_010524.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: mpt:Mpe_A0655 glycosyl hydrolase, family 3; beta-N-acetylhexosaminidase 644264 6159702 Lcho_0593 Leptothrix cholodnii SP-6 beta-N-acetylhexosaminidase YP_001789633.1 643161 R 395495 CDS YP_001789634.1 171057285 6159703 complement(644265..644663) 1 NC_010524.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 644663 acpS 6159703 acpS Leptothrix cholodnii SP-6 4'-phosphopantetheinyl transferase YP_001789634.1 644265 R 395495 CDS YP_001789635.1 171057286 6159704 complement(644660..645466) 1 NC_010524.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 645466 6159704 Lcho_0595 Leptothrix cholodnii SP-6 pyridoxine 5'-phosphate synthase YP_001789635.1 644660 R 395495 CDS YP_001789636.1 171057287 6160227 complement(645522..646292) 1 NC_010524.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: mpt:Mpe_A0652 putative DNA repair protein RecO; DNA repair protein RecO 646292 6160227 Lcho_0596 Leptothrix cholodnii SP-6 DNA repair protein RecO YP_001789636.1 645522 R 395495 CDS YP_001789637.1 171057288 6160228 complement(646296..647342) 1 NC_010524.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; KEGG: mpt:Mpe_A0651 putative GTP-binding protein; GTP-binding protein Era 647342 6160228 Lcho_0597 Leptothrix cholodnii SP-6 GTP-binding protein Era YP_001789637.1 646296 R 395495 CDS YP_001789638.1 171057289 6160229 complement(647339..648025) 1 NC_010524.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: mpt:Mpe_A0650 ribonuclease III; ribonuclease III 648025 6160229 Lcho_0598 Leptothrix cholodnii SP-6 ribonuclease III YP_001789638.1 647339 R 395495 CDS YP_001789639.1 171057290 6160230 complement(648054..648425) 1 NC_010524.1 KEGG: mpt:Mpe_A0649 hypothetical protein; hypothetical protein 648425 6160230 Lcho_0599 Leptothrix cholodnii SP-6 hypothetical protein YP_001789639.1 648054 R 395495 CDS YP_001789640.1 171057291 6160231 complement(648471..649439) 1 NC_010524.1 KEGG: mpt:Mpe_A0648 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I 649439 6160231 Lcho_0600 Leptothrix cholodnii SP-6 signal peptidase I YP_001789640.1 648471 R 395495 CDS YP_001789641.1 171057292 6160232 complement(649456..651264) 1 NC_010524.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 651264 6160232 Lcho_0601 Leptothrix cholodnii SP-6 GTP-binding protein LepA YP_001789641.1 649456 R 395495 CDS YP_001789642.1 171057293 6159880 complement(651711..653261) 1 NC_010524.1 KEGG: mpt:Mpe_A0645 subfamily S1C unassigned peptidase; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 653261 6159880 Lcho_0602 Leptothrix cholodnii SP-6 protease Do YP_001789642.1 651711 R 395495 CDS YP_001789643.1 171057294 6159881 complement(653388..654551) 1 NC_010524.1 KEGG: mpt:Mpe_A0644 putative sigma E factor regulatory protein; putative sigma E regulatory protein, MucB/RseB 654551 6159881 Lcho_0603 Leptothrix cholodnii SP-6 putative sigma E regulatory protein, MucB/RseB YP_001789643.1 653388 R 395495 CDS YP_001789644.1 171057295 6159882 complement(654548..655195) 1 NC_010524.1 PFAM: Anti sigma-E protein RseA family protein; KEGG: mpt:Mpe_A0643 putative transmembrane sigma-E factor negative regulatory transcription regulator protein; anti sigma-E protein RseA 655195 6159882 Lcho_0604 Leptothrix cholodnii SP-6 anti sigma-E protein RseA YP_001789644.1 654548 R 395495 CDS YP_001789645.1 171057296 6159883 complement(655221..655829) 1 NC_010524.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 655829 6159883 Lcho_0605 Leptothrix cholodnii SP-6 RNA polymerase sigma factor RpoE YP_001789645.1 655221 R 395495 CDS YP_001789646.1 171057297 6159884 complement(655819..656313) 1 NC_010524.1 KEGG: mpt:Mpe_A0641 hypothetical protein; hypothetical protein 656313 6159884 Lcho_0606 Leptothrix cholodnii SP-6 hypothetical protein YP_001789646.1 655819 R 395495 CDS YP_001789647.1 171057298 6159885 complement(656341..657585) 1 NC_010524.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: mpt:Mpe_A0640 putative 3-oxoacyl-(acyl-carrier-protein) synthase II; 3-oxoacyl-(acyl-carrier-protein) synthase 2 657585 6159885 Lcho_0607 Leptothrix cholodnii SP-6 3-oxoacyl-(acyl-carrier-protein) synthase 2 YP_001789647.1 656341 R 395495 CDS YP_001789648.1 171057299 6159855 complement(657633..657872) 1 NC_010524.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 657872 acpP 6159855 acpP Leptothrix cholodnii SP-6 acyl carrier protein YP_001789648.1 657633 R 395495 CDS YP_001789649.1 171057300 6159856 complement(658016..658768) 1 NC_010524.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mpt:Mpe_A0638 3-oxoacyl-(acyl-carrier protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 658768 6159856 Lcho_0609 Leptothrix cholodnii SP-6 3-oxoacyl-(acyl-carrier-protein) reductase YP_001789649.1 658016 R 395495 CDS YP_001789650.1 171057301 6159857 complement(658777..659715) 1 NC_010524.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: mpt:Mpe_A0637 putative malonyl CoA-(acyl-carrier-protein) transacylase; malonyl CoA-acyl carrier protein transacylase 659715 6159857 Lcho_0610 Leptothrix cholodnii SP-6 malonyl CoA-acyl carrier protein transacylase YP_001789650.1 658777 R 395495 CDS YP_001789651.1 171057302 6159858 complement(659792..660784) 1 NC_010524.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 660784 6159858 Lcho_0611 Leptothrix cholodnii SP-6 3-oxoacyl-ACP synthase YP_001789651.1 659792 R 395495 CDS YP_001789652.1 171057303 6159859 complement(660781..661872) 1 NC_010524.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 661872 6159859 Lcho_0612 Leptothrix cholodnii SP-6 putative glycerol-3-phosphate acyltransferase PlsX YP_001789652.1 660781 R 395495 CDS YP_001789653.1 171057304 6159860 complement(662026..662208) 1 NC_010524.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 662208 rpmF 6159860 rpmF Leptothrix cholodnii SP-6 50S ribosomal protein L32 YP_001789653.1 662026 R 395495 CDS YP_001789654.1 171057305 6160097 complement(662303..662875) 1 NC_010524.1 PFAM: protein of unknown function DUF177; KEGG: aav:Aave_1180 protein of unknown function DUF177; hypothetical protein 662875 6160097 Lcho_0614 Leptothrix cholodnii SP-6 hypothetical protein YP_001789654.1 662303 R 395495 CDS YP_001789655.1 171057306 6160098 662930..663547 1 NC_010524.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: mpt:Mpe_A0633 hypothetical protein; maf protein 663547 6160098 Lcho_0615 Leptothrix cholodnii SP-6 maf protein YP_001789655.1 662930 D 395495 CDS YP_001789656.1 171057307 6160099 663537..664334 1 NC_010524.1 KEGG: mpt:Mpe_A0632 putative transmembrane protein; putative transmembrane protein 664334 6160099 Lcho_0616 Leptothrix cholodnii SP-6 putative transmembrane protein YP_001789656.1 663537 D 395495 CDS YP_001789657.1 171057308 6160100 complement(664370..665809) 1 NC_010524.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mpt:Mpe_A0631 putative ATP-dependent RNA helicase 2; DEAD/DEAH box helicase 665809 6160100 Lcho_0617 Leptothrix cholodnii SP-6 DEAD/DEAH box helicase YP_001789657.1 664370 R 395495 CDS YP_001789658.1 171057309 6160101 complement(665820..666941) 1 NC_010524.1 PFAM: glycosyl transferase family 4; KEGG: mpt:Mpe_A0630 putative undecaprenyl phosphate N-acetylglucosaminyltransferase; glycosyl transferase family protein 666941 6160101 Lcho_0618 Leptothrix cholodnii SP-6 glycosyl transferase family protein YP_001789658.1 665820 R 395495 CDS YP_001789659.1 171057310 6160102 667197..668264 1 NC_010524.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: eba:ebA2278 putative dTDP-D-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 668264 6160102 Lcho_0619 Leptothrix cholodnii SP-6 dTDP-glucose 4,6-dehydratase YP_001789659.1 667197 D 395495 CDS YP_001789660.1 171057311 6160184 668280..669170 1 NC_010524.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: dac:Daci_1276 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 669170 6160184 Lcho_0620 Leptothrix cholodnii SP-6 dTDP-4-dehydrorhamnose reductase YP_001789660.1 668280 D 395495 CDS YP_001789661.1 171057312 6160185 669198..670079 1 NC_010524.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mpt:Mpe_A0626 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 670079 6160185 Lcho_0621 Leptothrix cholodnii SP-6 glucose-1-phosphate thymidylyltransferase YP_001789661.1 669198 D 395495 CDS YP_001789662.1 171057313 6160186 670102..670653 1 NC_010524.1 KEGG: rme:Rmet_2732 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 670653 6160186 Lcho_0622 Leptothrix cholodnii SP-6 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001789662.1 670102 D 395495 CDS YP_001789663.1 171057314 6160187 670723..672168 1 NC_010524.1 KEGG: mpt:Mpe_A0629 mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 672168 6160187 Lcho_0623 Leptothrix cholodnii SP-6 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_001789663.1 670723 D 395495 CDS YP_001789664.1 171057315 6160188 672652..673578 1 NC_010524.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: ret:RHE_CH00763 GDP-L-fucose synthase protein; NAD-dependent epimerase/dehydratase 673578 6160188 Lcho_0624 Leptothrix cholodnii SP-6 NAD-dependent epimerase/dehydratase YP_001789664.1 672652 D 395495 CDS YP_001789665.1 171057316 6160189 673587..673814 1 NC_010524.1 hypothetical protein 673814 6160189 Lcho_0625 Leptothrix cholodnii SP-6 hypothetical protein YP_001789665.1 673587 D 395495 CDS YP_001789666.1 171057317 6159969 673811..674074 1 NC_010524.1 KEGG: cch:Cag_0660 hypothetical protein; hypothetical protein 674074 6159969 Lcho_0626 Leptothrix cholodnii SP-6 hypothetical protein YP_001789666.1 673811 D 395495 CDS YP_001789667.1 171057318 6159970 674216..675340 1 NC_010524.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: mpt:Mpe_A2731 GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 675340 6159970 Lcho_0627 Leptothrix cholodnii SP-6 GDP-mannose 4,6-dehydratase YP_001789667.1 674216 D 395495 CDS YP_001789668.1 171057319 6159971 complement(675375..675965) 1 NC_010524.1 PFAM: protein of unknown function DUF820; KEGG: pna:Pnap_0294 protein of unknown function DUF820; hypothetical protein 675965 6159971 Lcho_0628 Leptothrix cholodnii SP-6 hypothetical protein YP_001789668.1 675375 R 395495 CDS YP_001789669.1 171057320 6159972 676061..677287 1 NC_010524.1 PFAM: glycosyl transferase group 1; KEGG: cvi:CV_0515 probable glycosyltransferase; group 1 glycosyl transferase 677287 6159972 Lcho_0629 Leptothrix cholodnii SP-6 group 1 glycosyl transferase YP_001789669.1 676061 D 395495 CDS YP_001789670.1 171057321 6159973 complement(677323..677703) 1 NC_010524.1 PFAM: PilT protein domain protein; KEGG: pna:Pnap_4802 PilT protein domain protein; PilT domain-containing protein 677703 6159973 Lcho_0630 Leptothrix cholodnii SP-6 PilT domain-containing protein YP_001789670.1 677323 R 395495 CDS YP_001789671.1 171057322 6159974 complement(677700..677906) 1 NC_010524.1 KEGG: pna:Pnap_4803 hypothetical protein; hypothetical protein 677906 6159974 Lcho_0631 Leptothrix cholodnii SP-6 hypothetical protein YP_001789671.1 677700 R 395495 CDS YP_001789672.1 171057323 6160178 678225..682472 1 NC_010524.1 PFAM: Hemolysin-type calcium-binding region; Na-Ca exchanger/integrin-beta4; KEGG: ret:RHE_CH00724 rhizobiocin/RTX toxin and hemolysin-type calcium binding protein; Na-Ca exchanger/integrin-beta4 682472 6160178 Lcho_0632 Leptothrix cholodnii SP-6 Na-Ca exchanger/integrin-beta4 YP_001789672.1 678225 D 395495 CDS YP_001789673.1 171057324 6160179 complement(682544..684346) 1 NC_010524.1 KEGG: cpy:Cphy_0396 hypothetical protein; hypothetical protein 684346 6160179 Lcho_0633 Leptothrix cholodnii SP-6 hypothetical protein YP_001789673.1 682544 R 395495 CDS YP_001789674.1 171057325 6160180 complement(684508..685224) 1 NC_010524.1 KEGG: pgi:PG0119 glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase 685224 6160180 Lcho_0634 Leptothrix cholodnii SP-6 WecB/TagA/CpsF family glycosyl transferase YP_001789674.1 684508 R 395495 CDS YP_001789675.1 171057326 6160181 complement(685212..686423) 1 NC_010524.1 PFAM: glycosyl transferase group 1; KEGG: azo:azo3272 glycosyltransferase; group 1 glycosyl transferase 686423 6160181 Lcho_0635 Leptothrix cholodnii SP-6 group 1 glycosyl transferase YP_001789675.1 685212 R 395495 CDS YP_001789676.1 171057327 6160182 complement(686416..687708) 1 NC_010524.1 KEGG: saz:Sama_2255 hypothetical protein; hypothetical protein 687708 6160182 Lcho_0636 Leptothrix cholodnii SP-6 hypothetical protein YP_001789676.1 686416 R 395495 CDS YP_001789677.1 171057328 6160183 complement(687723..689129) 1 NC_010524.1 PFAM: polysaccharide biosynthesis protein; KEGG: mmw:Mmwyl1_0834 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 689129 6160183 Lcho_0637 Leptothrix cholodnii SP-6 polysaccharide biosynthesis protein YP_001789677.1 687723 R 395495 CDS YP_001789678.1 171057329 6161902 complement(689126..690256) 1 NC_010524.1 catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; TDP-4-oxo-6-deoxy-D-glucose transaminase 690256 6161902 Lcho_0638 Leptothrix cholodnii SP-6 TDP-4-oxo-6-deoxy-D-glucose transaminase YP_001789678.1 689126 R 395495 CDS YP_001789679.1 171057330 6161903 complement(690253..690819) 1 NC_010524.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: sun:SUN_1549 hypothetical protein; hexapaptide repeat-containing transferase 690819 6161903 Lcho_0639 Leptothrix cholodnii SP-6 hexapaptide repeat-containing transferase YP_001789679.1 690253 R 395495 CDS YP_001789680.1 171057331 6161904 complement(690819..691871) 1 NC_010524.1 catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis; 4-alpha-L-fucosyltransferase 691871 6161904 Lcho_0640 Leptothrix cholodnii SP-6 4-alpha-L-fucosyltransferase YP_001789680.1 690819 R 395495 CDS YP_001789681.1 171057332 6161905 complement(691929..693212) 1 NC_010524.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: pau:PA14_23380 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; nucleotide sugar dehydrogenase 693212 6161905 Lcho_0641 Leptothrix cholodnii SP-6 nucleotide sugar dehydrogenase YP_001789681.1 691929 R 395495 CDS YP_001789682.1 171057333 6161906 complement(693209..694291) 1 NC_010524.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: esa:ESA_03772 hypothetical protein; UDP-N-acetylglucosamine 2-epimerase 694291 6161906 Lcho_0642 Leptothrix cholodnii SP-6 UDP-N-acetylglucosamine 2-epimerase YP_001789682.1 693209 R 395495 CDS YP_001789683.1 171057334 6161907 complement(694396..695592) 1 NC_010524.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: rfr:Rfer_1234 lipopolysaccharide biosynthesis; lipopolysaccharide biosynthesis protein 695592 6161907 Lcho_0643 Leptothrix cholodnii SP-6 lipopolysaccharide biosynthesis protein YP_001789683.1 694396 R 395495 CDS YP_001789684.1 171057335 6161999 complement(695589..695795) 1 NC_010524.1 hypothetical protein 695795 6161999 Lcho_0644 Leptothrix cholodnii SP-6 hypothetical protein YP_001789684.1 695589 R 395495 CDS YP_001789685.1 171057336 6162000 complement(696044..697177) 1 NC_010524.1 KEGG: pna:Pnap_4284 hypothetical protein; hypothetical protein 697177 6162000 Lcho_0645 Leptothrix cholodnii SP-6 hypothetical protein YP_001789685.1 696044 R 395495 CDS YP_001789686.1 171057337 6162001 697323..697622 1 NC_010524.1 PFAM: DNA polymerase beta domain protein region; KEGG: aeh:Mlg_0863 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 697622 6162001 Lcho_0646 Leptothrix cholodnii SP-6 DNA polymerase subunit beta YP_001789686.1 697323 D 395495 CDS YP_001789687.1 171057338 6162002 697619..698101 1 NC_010524.1 KEGG: aeh:Mlg_0864 hypothetical protein; hypothetical protein 698101 6162002 Lcho_0647 Leptothrix cholodnii SP-6 hypothetical protein YP_001789687.1 697619 D 395495 CDS YP_001789688.1 171057339 6162003 complement(698132..700471) 1 NC_010524.1 PFAM: polysaccharide export protein; KEGG: bte:BTH_II1986 polysaccharide biosynthesis protein, putative; polysaccharide export protein 700471 6162003 Lcho_0648 Leptothrix cholodnii SP-6 polysaccharide export protein YP_001789688.1 698132 R 395495 CDS YP_001789689.1 171057340 6162004 701460..704297 1 NC_010524.1 PFAM: multicopper oxidase type 2; KEGG: ppf:Pput_2532 multicopper oxidase, type 2; multicopper oxidase type 2 704297 6162004 Lcho_0649 Leptothrix cholodnii SP-6 multicopper oxidase type 2 YP_001789689.1 701460 D 395495 CDS YP_001789690.1 171057341 6163396 704383..705405 1 NC_010524.1 PFAM: cytochrome c class I; electron transport protein SCO1/SenC; KEGG: pfo:Pfl_2002 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 705405 6163396 Lcho_0650 Leptothrix cholodnii SP-6 electron transport protein SCO1/SenC YP_001789690.1 704383 D 395495 CDS YP_001789691.1 171057342 6163397 complement(705395..707284) 1 NC_010524.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; KEGG: mpt:Mpe_A2628 chorismate binding enzyme; para-aminobenzoate synthase subunit I 707284 6163397 Lcho_0651 Leptothrix cholodnii SP-6 para-aminobenzoate synthase subunit I YP_001789691.1 705395 R 395495 CDS YP_001789692.1 171057343 6163398 complement(707309..708229) 1 NC_010524.1 KEGG: mpt:Mpe_A2611 ATP:dephospho-CoA triphosphoribosyl transferase; ATP:dephospho-CoA triphosphoribosyl transferase 708229 6163398 Lcho_0652 Leptothrix cholodnii SP-6 ATP:dephospho-CoA triphosphoribosyl transferase YP_001789692.1 707309 R 395495 CDS YP_001789693.1 171057344 6163399 708666..709055 1 NC_010524.1 PFAM: protein of unknown function DUF583; KEGG: xcb:XC_0499 hypothetical protein; hypothetical protein 709055 6163399 Lcho_0653 Leptothrix cholodnii SP-6 hypothetical protein YP_001789693.1 708666 D 395495 CDS YP_001789694.1 171057345 6163400 709052..709705 1 NC_010524.1 hypothetical protein 709705 6163400 Lcho_0654 Leptothrix cholodnii SP-6 hypothetical protein YP_001789694.1 709052 D 395495 CDS YP_001789695.1 171057346 6163401 709752..712001 1 NC_010524.1 KEGG: lma:LmjF35.0290 hypothetical protein, conserved; hypothetical protein 712001 6163401 Lcho_0655 Leptothrix cholodnii SP-6 hypothetical protein YP_001789695.1 709752 D 395495 CDS YP_001789696.1 171057347 6163769 712032..712568 1 NC_010524.1 TIGRFAM: small GTP-binding protein; PFAM: protein of unknown function ATP binding; KEGG: noc:Noc_0133 conserved hypothetical ATP binding protein; small GTP-binding protein 712568 6163769 Lcho_0656 Leptothrix cholodnii SP-6 small GTP-binding protein YP_001789696.1 712032 D 395495 CDS YP_001789697.1 171057348 6163770 712636..713274 1 NC_010524.1 KEGG: noc:Noc_0134 hypothetical protein; hypothetical protein 713274 6163770 Lcho_0657 Leptothrix cholodnii SP-6 hypothetical protein YP_001789697.1 712636 D 395495 CDS YP_001789698.1 171057349 6163771 713337..713699 1 NC_010524.1 PFAM: Roadblock/LC7 family protein; KEGG: noc:Noc_1488 Roadblock/LC7; roadblock/LC7 family protein 713699 6163771 Lcho_0658 Leptothrix cholodnii SP-6 roadblock/LC7 family protein YP_001789698.1 713337 D 395495 CDS YP_001789699.1 171057350 6163772 713725..714219 1 NC_010524.1 KEGG: pna:Pnap_2812 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein 714219 6163772 Lcho_0659 Leptothrix cholodnii SP-6 putative PAS/PAC sensor protein YP_001789699.1 713725 D 395495 CDS YP_001789700.1 171057351 6163773 714216..714962 1 NC_010524.1 KEGG: noc:Noc_1486 ABC-type phosphate/phosphonate transport system periplasmic component; phosphate/phosphonate ABC transporter periplasmic protein 714962 6163773 Lcho_0660 Leptothrix cholodnii SP-6 phosphate/phosphonate ABC transporter periplasmic protein YP_001789700.1 714216 D 395495 CDS YP_001789701.1 171057352 6163774 715010..716188 1 NC_010524.1 KEGG: lma:LmjF35.0290 hypothetical protein, conserved; hypothetical protein 716188 6163774 Lcho_0661 Leptothrix cholodnii SP-6 hypothetical protein YP_001789701.1 715010 D 395495 CDS YP_001789702.1 171057353 6163895 complement(716216..717049) 1 NC_010524.1 KEGG: pmy:Pmen_0549 sporulation domain protein; hypothetical protein 717049 6163895 Lcho_0662 Leptothrix cholodnii SP-6 hypothetical protein YP_001789702.1 716216 R 395495 CDS YP_001789703.1 171057354 6163896 complement(717042..718265) 1 NC_010524.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: abo:ABO_1476 ammonium transporter, putative; ammonium transporter 718265 6163896 Lcho_0663 Leptothrix cholodnii SP-6 ammonium transporter YP_001789703.1 717042 R 395495 CDS YP_001789704.1 171057355 6163897 complement(718666..719571) 1 NC_010524.1 TIGRFAM: cysteine synthase; cysteine synthase B; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mpt:Mpe_A1132 cysteine synthase B; cysteine synthase B 719571 6163897 Lcho_0664 Leptothrix cholodnii SP-6 cysteine synthase B YP_001789704.1 718666 R 395495 CDS YP_001789705.1 171057356 6163899 719852..720454 1 NC_010524.1 PFAM: Rhomboid family protein; KEGG: mpt:Mpe_A1130 integral membrane protein; rhomboid family protein 720454 6163899 Lcho_0665 Leptothrix cholodnii SP-6 rhomboid family protein YP_001789705.1 719852 D 395495 CDS YP_001789706.1 171057357 6163900 720530..721684 1 NC_010524.1 PFAM: PDZ/DHR/GLGF domain protein; KEGG: mpt:Mpe_A1129 putative serine protease; PDZ/DHR/GLGF domain-containing protein 721684 6163900 Lcho_0666 Leptothrix cholodnii SP-6 PDZ/DHR/GLGF domain-containing protein YP_001789706.1 720530 D 395495 CDS YP_001789707.1 171057358 6163859 complement(721705..722673) 1 NC_010524.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: mpt:Mpe_A1128 putative oxidoreductase protein; NAD-dependent epimerase/dehydratase 722673 6163859 Lcho_0667 Leptothrix cholodnii SP-6 NAD-dependent epimerase/dehydratase YP_001789707.1 721705 R 395495 CDS YP_001789708.1 171057359 6163860 722757..723788 1 NC_010524.1 catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase 723788 6163860 Lcho_0668 Leptothrix cholodnii SP-6 CDP-6-deoxy-delta-3,4-glucoseen reductase YP_001789708.1 722757 D 395495 CDS YP_001789709.1 171057360 6163861 complement(723858..724160) 1 NC_010524.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 724160 rpsT 6163861 rpsT Leptothrix cholodnii SP-6 30S ribosomal protein S20 YP_001789709.1 723858 R 395495 CDS YP_001789710.1 171057361 6163862 724316..725878 1 NC_010524.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: mpt:Mpe_A3026 putative transmembrane protein; integral membrane protein MviN 725878 6163862 Lcho_0670 Leptothrix cholodnii SP-6 integral membrane protein MviN YP_001789710.1 724316 D 395495 CDS YP_001789711.1 171057362 6163863 725900..726772 1 NC_010524.1 KEGG: mpt:Mpe_A3024 hypothetical protein; hypothetical protein 726772 6163863 Lcho_0671 Leptothrix cholodnii SP-6 hypothetical protein YP_001789711.1 725900 D 395495 CDS YP_001789712.1 171057363 6163864 726837..727898 1 NC_010524.1 PFAM: protein of unknown function UPF0118; KEGG: mpt:Mpe_A3023 putative permease transmembrane transport protein; hypothetical protein 727898 6163864 Lcho_0672 Leptothrix cholodnii SP-6 hypothetical protein YP_001789712.1 726837 D 395495 CDS YP_001789713.1 171057364 6160337 727929..728606 1 NC_010524.1 KEGG: mpt:Mpe_A3022 hypothetical protein; TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA; SMART: AAA ATPase; DnaA regulatory inactivator Hda 728606 6160337 Lcho_0673 Leptothrix cholodnii SP-6 DnaA regulatory inactivator Hda YP_001789713.1 727929 D 395495 CDS YP_001789714.1 171057365 6160338 728603..729286 1 NC_010524.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mpt:Mpe_A3021 hypothetical protein; HAD family hydrolase 729286 6160338 Lcho_0674 Leptothrix cholodnii SP-6 HAD family hydrolase YP_001789714.1 728603 D 395495 CDS YP_001789715.1 171057366 6160339 729283..730779 1 NC_010524.1 KEGG: mpt:Mpe_A3020 putative polynucleotide adenylyltransferase protein; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase 730779 6160339 Lcho_0675 Leptothrix cholodnii SP-6 poly(A) polymerase YP_001789715.1 729283 D 395495 CDS YP_001789716.1 171057367 6160340 730799..731287 1 NC_010524.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: mpt:Mpe_A3019 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 731287 6160340 Lcho_0676 Leptothrix cholodnii SP-6 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_001789716.1 730799 D 395495 CDS YP_001789717.1 171057368 6160341 731467..732114 1 NC_010524.1 PFAM: protein of unknown function DUF47; KEGG: mpt:Mpe_A3016 hypothetical protein; hypothetical protein 732114 6160341 Lcho_0677 Leptothrix cholodnii SP-6 hypothetical protein YP_001789717.1 731467 D 395495 CDS YP_001789718.1 171057369 6160342 732128..733138 1 NC_010524.1 PFAM: phosphate transporter; KEGG: dac:Daci_5348 phosphate transporter; phosphate transporter 733138 6160342 Lcho_0678 Leptothrix cholodnii SP-6 phosphate transporter YP_001789718.1 732128 D 395495 CDS YP_001789719.1 171057370 6160798 complement(733125..733610) 1 NC_010524.1 KEGG: mpt:Mpe_A1102 hypothetical protein; hypothetical protein 733610 6160798 Lcho_0679 Leptothrix cholodnii SP-6 hypothetical protein YP_001789719.1 733125 R 395495 CDS YP_001789720.1 171057371 6160799 complement(733607..734167) 1 NC_010524.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpt:Mpe_A1103 putative phosphinothricin acetyltransferase; N-acetyltransferase GCN5 734167 6160799 Lcho_0680 Leptothrix cholodnii SP-6 N-acetyltransferase GCN5 YP_001789720.1 733607 R 395495 CDS YP_001789721.1 171057372 6160800 734392..734652 1 NC_010524.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 734652 rpsP 6160800 rpsP Leptothrix cholodnii SP-6 30S ribosomal protein S16 YP_001789721.1 734392 D 395495 CDS YP_001789722.1 171057373 6160801 734710..735294 1 NC_010524.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 735294 rimM 6160801 rimM Leptothrix cholodnii SP-6 16S rRNA-processing protein RimM YP_001789722.1 734710 D 395495 CDS YP_001789723.1 171057374 6160802 735328..736077 1 NC_010524.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 736077 trmD 6160802 trmD Leptothrix cholodnii SP-6 tRNA (guanine-N(1)-)-methyltransferase YP_001789723.1 735328 D 395495 CDS YP_001789724.1 171057375 6160803 736154..736507 1 NC_010524.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 736507 rplS 6160803 rplS Leptothrix cholodnii SP-6 50S ribosomal protein L19 YP_001789724.1 736154 D 395495 CDS YP_001789725.1 171057376 6164093 736589..737296 1 NC_010524.1 PFAM: NUDIX hydrolase; KEGG: mpt:Mpe_A1108 hypothetical protein; NUDIX hydrolase 737296 6164093 Lcho_0685 Leptothrix cholodnii SP-6 NUDIX hydrolase YP_001789725.1 736589 D 395495 CDS YP_001789726.1 171057377 6164094 737358..738347 1 NC_010524.1 KEGG: mpt:Mpe_A1109 putative cobalamin biosynthesis transmembrane protein; putative cobalamin biosynthesis transmembrane protein 738347 6164094 Lcho_0686 Leptothrix cholodnii SP-6 putative cobalamin biosynthesis transmembrane protein YP_001789726.1 737358 D 395495 CDS YP_001789727.1 171057378 6164095 complement(738376..739101) 1 NC_010524.1 PFAM: protein of unknown function DUF599; KEGG: mpt:Mpe_A2884 hypothetical protein; hypothetical protein 739101 6164095 Lcho_0687 Leptothrix cholodnii SP-6 hypothetical protein YP_001789727.1 738376 R 395495 CDS YP_001789728.1 171057379 6164096 complement(739125..739835) 1 NC_010524.1 PFAM: Pirin domain protein; Cupin 2 conserved barrel domain protein; KEGG: mpt:Mpe_A2889 putative pirin-like protein; pirin domain-containing protein 739835 6164096 Lcho_0688 Leptothrix cholodnii SP-6 pirin domain-containing protein YP_001789728.1 739125 R 395495 CDS YP_001789729.1 171057380 6164097 739946..740944 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A2890 putative transcriptional regulator transcription regulator protein; LysR family transcriptional regulator 740944 6164097 Lcho_0689 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001789729.1 739946 D 395495 CDS YP_001789730.1 171057381 6164098 740952..741854 1 NC_010524.1 PFAM: glutamyl-tRNA synthetase class Ic; KEGG: mpt:Mpe_A2900 glutamate--tRNA ligase; glutamate--tRNA ligase 741854 6164098 Lcho_0690 Leptothrix cholodnii SP-6 glutamate--tRNA ligase YP_001789730.1 740952 D 395495 CDS YP_001789731.1 171057382 6160817 741988..742347 1 NC_010524.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: pna:Pnap_1619 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 742347 6160817 Lcho_0691 Leptothrix cholodnii SP-6 FKBP-type peptidylprolyl isomerase YP_001789731.1 741988 D 395495 CDS YP_001789732.1 171057383 6160819 complement(742538..743833) 1 NC_010524.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 743833 6160819 Lcho_0692 Leptothrix cholodnii SP-6 seryl-tRNA synthetase YP_001789732.1 742538 R 395495 CDS YP_001789733.1 171057384 6160820 complement(743928..744911) 1 NC_010524.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 744911 ispH 6160820 ispH Leptothrix cholodnii SP-6 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_001789733.1 743928 R 395495 CDS YP_001789734.1 171057385 6160821 complement(744911..745363) 1 NC_010524.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: mpt:Mpe_A2694 putative FkpB-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase 745363 6160821 Lcho_0694 Leptothrix cholodnii SP-6 FKBP-type peptidylprolyl isomerase YP_001789734.1 744911 R 395495 CDS YP_001789735.1 171057386 6160822 745438..746106 1 NC_010524.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 746106 radC 6160822 radC Leptothrix cholodnii SP-6 DNA repair protein RadC YP_001789735.1 745438 D 395495 CDS YP_001789736.1 171057387 6163428 746133..746813 1 NC_010524.1 PFAM: Smr protein/MutS2; KEGG: pol:Bpro_0947 Smr protein/MutS2; Smr protein/MutS2 746813 6163428 Lcho_0696 Leptothrix cholodnii SP-6 Smr protein/MutS2 YP_001789736.1 746133 D 395495 CDS YP_001789737.1 171057388 6163429 complement(746844..747272) 1 NC_010524.1 PFAM: globin; KEGG: ajs:Ajs_3454 globin; globin 747272 6163429 Lcho_0697 Leptothrix cholodnii SP-6 globin YP_001789737.1 746844 R 395495 CDS YP_001789738.1 171057389 6163430 complement(747327..748148) 1 NC_010524.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ajs:Ajs_2277 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 748148 6163430 Lcho_0698 Leptothrix cholodnii SP-6 cobyrinic acid ac-diamide synthase YP_001789738.1 747327 R 395495 CDS YP_001789739.1 171057390 6163431 complement(748145..748825) 1 NC_010524.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mpt:Mpe_A2699 GGDEF domain containing protein; diguanylate cyclase 748825 6163431 Lcho_0699 Leptothrix cholodnii SP-6 diguanylate cyclase YP_001789739.1 748145 R 395495 CDS YP_001789740.1 171057391 6163432 749221..750075 1 NC_010524.1 PFAM: MCP methyltransferase CheR-type; KEGG: mpt:Mpe_A2700 methylase of methyl-accepting chemotaxis protein; CheR-type MCP methyltransferase 750075 6163432 Lcho_0700 Leptothrix cholodnii SP-6 CheR-type MCP methyltransferase YP_001789740.1 749221 D 395495 CDS YP_001789741.1 171057392 6163433 750124..750783 1 NC_010524.1 stimulates methylation of MCP proteins; catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD 750783 6163433 Lcho_0701 Leptothrix cholodnii SP-6 chemoreceptor glutamine deamidase CheD YP_001789741.1 750124 D 395495 CDS YP_001789742.1 171057393 6163750 750830..751984 1 NC_010524.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: mpt:Mpe_A2702 chemotaxis response regulator; response regulator receiver modulated CheB methylesterase 751984 6163750 Lcho_0702 Leptothrix cholodnii SP-6 response regulator receiver modulated CheB methylesterase YP_001789742.1 750830 D 395495 CDS YP_001789743.1 171057394 6163751 complement(752008..753381) 1 NC_010524.1 KEGG: ajs:Ajs_0921 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 753381 6163751 Lcho_0703 Leptothrix cholodnii SP-6 oxygen-independent coproporphyrinogen III oxidase YP_001789743.1 752008 R 395495 CDS YP_001789744.1 171057395 6163752 complement(753389..754027) 1 NC_010524.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 754027 6163752 Lcho_0704 Leptothrix cholodnii SP-6 putative deoxyribonucleotide triphosphate pyrophosphatase YP_001789744.1 753389 R 395495 CDS YP_001789745.1 171057396 6163753 complement(754030..754755) 1 NC_010524.1 KEGG: mpt:Mpe_A2705 tRNA nucleotidyltransferase; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; ribonuclease PH 754755 6163753 Lcho_0705 Leptothrix cholodnii SP-6 ribonuclease PH YP_001789745.1 754030 R 395495 CDS YP_001789746.1 171057397 6163754 complement(754875..755789) 1 NC_010524.1 PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: mpt:Mpe_A2706 hypothetical protein; protein serine/threonine phosphatase 755789 6163754 Lcho_0706 Leptothrix cholodnii SP-6 protein serine/threonine phosphatase YP_001789746.1 754875 R 395495 CDS YP_001789747.1 171057398 6163755 complement(755835..756713) 1 NC_010524.1 SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mpt:Mpe_A2707 putative protein kinase; serine/threonine protein kinase 756713 6163755 Lcho_0707 Leptothrix cholodnii SP-6 serine/threonine protein kinase YP_001789747.1 755835 R 395495 CDS YP_001789748.1 171057399 6163541 756832..757740 1 NC_010524.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: mpt:Mpe_A2708 hypothetical protein; hypothetical protein 757740 6163541 Lcho_0708 Leptothrix cholodnii SP-6 hypothetical protein YP_001789748.1 756832 D 395495 CDS YP_001789749.1 171057400 6163542 complement(758111..759427) 1 NC_010524.1 KEGG: dac:Daci_2036 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969; fumarylacetoacetase 759427 6163542 Lcho_0709 Leptothrix cholodnii SP-6 fumarylacetoacetase YP_001789749.1 758111 R 395495 CDS YP_001789750.1 171057401 6163543 complement(759456..759737) 1 NC_010524.1 KEGG: bxe:Bxe_C0660 putative hydrolase; putative hydrolase 759737 6163543 Lcho_0710 Leptothrix cholodnii SP-6 putative hydrolase YP_001789750.1 759456 R 395495 CDS YP_001789751.1 171057402 6163544 complement(759737..760570) 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3546 uncharacterized protein UPF0065; hypothetical protein 760570 6163544 Lcho_0711 Leptothrix cholodnii SP-6 hypothetical protein YP_001789751.1 759737 R 395495 CDS YP_001789752.1 171057403 6163545 complement(760578..761552) 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: dac:Daci_4275 hypothetical protein; hypothetical protein 761552 6163545 Lcho_0712 Leptothrix cholodnii SP-6 hypothetical protein YP_001789752.1 760578 R 395495 CDS YP_001789753.1 171057404 6163546 complement(761568..762644) 1 NC_010524.1 KEGG: dac:Daci_5627 porin, gram-negative type; porin 762644 6163546 Lcho_0713 Leptothrix cholodnii SP-6 porin YP_001789753.1 761568 R 395495 CDS YP_001789754.1 171057405 6163090 complement(762786..763709) 1 NC_010524.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: dac:Daci_4272 SMP-30/gluconolaconase/LRE domain protein; SMP-30/gluconolaconase/LRE domain-containing protein 763709 6163090 Lcho_0714 Leptothrix cholodnii SP-6 SMP-30/gluconolaconase/LRE domain-containing protein YP_001789754.1 762786 R 395495 CDS YP_001789755.1 171057406 6163091 complement(763732..764703) 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_B0346 probable extra-cytoplasmic solute receptor; hypothetical protein 764703 6163091 Lcho_0715 Leptothrix cholodnii SP-6 hypothetical protein YP_001789755.1 763732 R 395495 CDS YP_001789756.1 171057407 6163092 complement(764757..765821) 1 NC_010524.1 KEGG: acr:Acry_2893 hypothetical protein; hypothetical protein 765821 6163092 Lcho_0716 Leptothrix cholodnii SP-6 hypothetical protein YP_001789756.1 764757 R 395495 CDS YP_001789757.1 171057408 6163093 complement(765827..766750) 1 NC_010524.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: dac:Daci_4276 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 766750 6163093 Lcho_0717 Leptothrix cholodnii SP-6 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_001789757.1 765827 R 395495 CDS YP_001789758.1 171057409 6163094 complement(766747..767445) 1 NC_010524.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: dac:Daci_4277 dimethylmenaquinone methyltransferase; dimethylmenaquinone methyltransferase 767445 6163094 Lcho_0718 Leptothrix cholodnii SP-6 dimethylmenaquinone methyltransferase YP_001789758.1 766747 R 395495 CDS YP_001789759.1 171057410 6163095 complement(767523..768503) 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_B4610 hypothetical protein; hypothetical protein 768503 6163095 Lcho_0719 Leptothrix cholodnii SP-6 hypothetical protein YP_001789759.1 767523 R 395495 CDS YP_001789760.1 171057411 6162957 768631..769527 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_2331 transcriptional regulator, LysR family; LysR family transcriptional regulator 769527 6162957 Lcho_0720 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001789760.1 768631 D 395495 CDS YP_001789761.1 171057412 6162958 complement(769621..770133) 1 NC_010524.1 KEGG: mmw:Mmwyl1_1944 hypothetical protein; hypothetical protein 770133 6162958 Lcho_0721 Leptothrix cholodnii SP-6 hypothetical protein YP_001789761.1 769621 R 395495 CDS YP_001789762.1 171057413 6162959 complement(770218..771324) 1 NC_010524.1 KEGG: kpn:KPN_01707 hypothetical protein; hypothetical protein 771324 6162959 Lcho_0722 Leptothrix cholodnii SP-6 hypothetical protein YP_001789762.1 770218 R 395495 CDS YP_001789763.1 171057414 6162960 771530..772525 1 NC_010524.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: rso:RSc0625 probable transcription regulator protein; AraC family transcriptional regulator 772525 6162960 Lcho_0723 Leptothrix cholodnii SP-6 AraC family transcriptional regulator YP_001789763.1 771530 D 395495 CDS YP_001789764.1 171057415 6162962 complement(773502..774950) 1 NC_010524.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: mpt:Mpe_A0752 hypothetical protein; transcriptional regulator 774950 6162962 Lcho_0726 Leptothrix cholodnii SP-6 transcriptional regulator YP_001789764.1 773502 R 395495 CDS YP_001789765.1 171057416 6163064 775018..775692 1 NC_010524.1 KEGG: nwi:Nwi_0459 hypothetical protein; hypothetical protein 775692 6163064 Lcho_0727 Leptothrix cholodnii SP-6 hypothetical protein YP_001789765.1 775018 D 395495 CDS YP_001789766.1 171057417 6163065 775755..777182 1 NC_010524.1 TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: pna:Pnap_2096 4Fe-4S ferredoxin, iron-sulfur binding domain protein; cytochrome c oxidase accessory protein CcoG 777182 6163065 Lcho_0728 Leptothrix cholodnii SP-6 cytochrome c oxidase accessory protein CcoG YP_001789766.1 775755 D 395495 CDS YP_001789767.1 171057418 6163066 777448..778077 1 NC_010524.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 778077 gmk 6163066 gmk Leptothrix cholodnii SP-6 guanylate kinase YP_001789767.1 777448 D 395495 CDS YP_001789768.1 171057419 6163067 778132..778335 1 NC_010524.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 778335 6163067 Lcho_0730 Leptothrix cholodnii SP-6 DNA-directed RNA polymerase subunit omega YP_001789768.1 778132 D 395495 CDS YP_001789769.1 171057420 6163068 778491..780800 1 NC_010524.1 KEGG: mpt:Mpe_A2721 GTP diphosphokinase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA 780800 6163068 Lcho_0731 Leptothrix cholodnii SP-6 (p)ppGpp synthetase I SpoT/RelA YP_001789769.1 778491 D 395495 CDS YP_001789770.1 171057421 6163069 complement(780790..781359) 1 NC_010524.1 TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mpt:Mpe_A2723 transcription elongation factor; transcription elongation factor GreB 781359 6163069 Lcho_0732 Leptothrix cholodnii SP-6 transcription elongation factor GreB YP_001789770.1 780790 R 395495 CDS YP_001789771.1 171057422 6160670 781601..782248 1 NC_010524.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; response regulator receiver; KEGG: reu:Reut_B5042 excisionase/Xis, DNA-binding; response regulator receiver protein 782248 6160670 Lcho_0733 Leptothrix cholodnii SP-6 response regulator receiver protein YP_001789771.1 781601 D 395495 CDS YP_001789772.1 171057423 6160671 782367..782750 1 NC_010524.1 PFAM: response regulator receiver; KEGG: dac:Daci_0738 response regulator receiver protein; response regulator receiver protein 782750 6160671 Lcho_0734 Leptothrix cholodnii SP-6 response regulator receiver protein YP_001789772.1 782367 D 395495 CDS YP_001789773.1 171057424 6160672 782852..783559 1 NC_010524.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mpt:Mpe_A2643 putative two component response regulator protein; two component transcriptional regulator 783559 6160672 Lcho_0735 Leptothrix cholodnii SP-6 two component transcriptional regulator YP_001789773.1 782852 D 395495 CDS YP_001789774.1 171057425 6160673 783595..784890 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A2642 putative two component sensor histidine kinase protein; histidine kinase 784890 6160673 Lcho_0736 Leptothrix cholodnii SP-6 histidine kinase YP_001789774.1 783595 D 395495 CDS YP_001789775.1 171057426 6160674 complement(784883..785326) 1 NC_010524.1 PFAM: protein of unknown function DUF1289; KEGG: mpt:Mpe_A2641 hypothetical protein; hypothetical protein 785326 6160674 Lcho_0737 Leptothrix cholodnii SP-6 hypothetical protein YP_001789775.1 784883 R 395495 CDS YP_001789776.1 171057427 6160675 complement(785370..785822) 1 NC_010524.1 PFAM: protein of unknown function DUF937; KEGG: gme:Gmet_2744 protein of unknown function DUF937; hypothetical protein 785822 6160675 Lcho_0738 Leptothrix cholodnii SP-6 hypothetical protein YP_001789776.1 785370 R 395495 CDS YP_001789777.1 171057428 6160724 complement(785891..787099) 1 NC_010524.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 787099 6160724 Lcho_0739 Leptothrix cholodnii SP-6 tryptophanyl-tRNA synthetase YP_001789777.1 785891 R 395495 CDS YP_001789778.1 171057429 6160725 787186..787815 1 NC_010524.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: mpt:Mpe_A2638 putative phosphoribosylglycinamide formyltransferase protein; phosphoribosylglycinamide formyltransferase 787815 6160725 Lcho_0740 Leptothrix cholodnii SP-6 phosphoribosylglycinamide formyltransferase YP_001789778.1 787186 D 395495 CDS YP_001789779.1 171057430 6160726 787852..789108 1 NC_010524.1 PFAM: Fmu (Sun) domain protein; KEGG: mpt:Mpe_A1114 NOL1/NOP2/Sun family protein; Fmu (Sun) domain-containing protein 789108 6160726 Lcho_0741 Leptothrix cholodnii SP-6 Fmu (Sun) domain-containing protein YP_001789779.1 787852 D 395495 CDS YP_001789780.1 171057431 6160727 789307..790530 1 NC_010524.1 PFAM: fatty acid desaturase; KEGG: mpt:Mpe_A1115 putative stearoyl-CoA desaturase oxidoreductase protein; fatty acid desaturase 790530 6160727 Lcho_0742 Leptothrix cholodnii SP-6 fatty acid desaturase YP_001789780.1 789307 D 395495 CDS YP_001789781.1 171057432 6160728 complement(790596..790922) 1 NC_010524.1 KEGG: mpt:Mpe_A2746 hypothetical protein; hypothetical protein 790922 6160728 Lcho_0743 Leptothrix cholodnii SP-6 hypothetical protein YP_001789781.1 790596 R 395495 CDS YP_001789782.1 171057433 6160729 790941..791963 1 NC_010524.1 PFAM: peptidase M23B; KEGG: mpt:Mpe_A2745 putative transmembrane protein; peptidase M23B 791963 6160729 Lcho_0744 Leptothrix cholodnii SP-6 peptidase M23B YP_001789782.1 790941 D 395495 CDS YP_001789783.1 171057434 6161313 792159..794918 1 NC_010524.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: mpt:Mpe_A2744 preprotein translocase SecA subunit; preprotein translocase subunit SecA 794918 6161313 Lcho_0745 Leptothrix cholodnii SP-6 preprotein translocase subunit SecA YP_001789783.1 792159 D 395495 CDS YP_001789784.1 171057435 6161314 794982..796211 1 NC_010524.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 796211 argJ 6161314 argJ Leptothrix cholodnii SP-6 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_001789784.1 794982 D 395495 CDS YP_001789785.1 171057436 6161315 complement(796284..801080) 1 NC_010524.1 TIGRFAM: outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; von Willebrand factor type A; Na-Ca exchanger/integrin-beta4; KEGG: pfo:Pfl_1463 VCBS; outer membrane adhesin-like protein 801080 6161315 Lcho_0747 Leptothrix cholodnii SP-6 outer membrane adhesin-like protein YP_001789785.1 796284 R 395495 CDS YP_001789786.1 171057437 6161316 complement(801230..802300) 1 NC_010524.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bvi:Bcep1808_3674 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 802300 6161316 Lcho_0748 Leptothrix cholodnii SP-6 L-carnitine dehydratase/bile acid-inducible protein F YP_001789786.1 801230 R 395495 CDS YP_001789787.1 171057438 6161317 complement(802297..803070) 1 NC_010524.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ajs:Ajs_0858 glycerophosphodiester phosphodiesterase; glycerophosphodiester phosphodiesterase 803070 6161317 Lcho_0749 Leptothrix cholodnii SP-6 glycerophosphodiester phosphodiesterase YP_001789787.1 802297 R 395495 CDS YP_001789788.1 171057439 6161318 803243..807172 1 NC_010524.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: mpt:Mpe_A2738 putative oxidoreductase protein; FAD linked oxidase domain-containing protein 807172 6161318 Lcho_0750 Leptothrix cholodnii SP-6 FAD linked oxidase domain-containing protein YP_001789788.1 803243 D 395495 CDS YP_001789789.1 171057440 6161265 complement(807179..808885) 1 NC_010524.1 KEGG: mpt:Mpe_A1948 hypothetical protein; hypothetical protein 808885 6161265 Lcho_0751 Leptothrix cholodnii SP-6 hypothetical protein YP_001789789.1 807179 R 395495 CDS YP_001789790.1 171057441 6161266 complement(809054..809224) 1 NC_010524.1 PFAM: ribosomal protein L33; KEGG: dar:Daro_3144 50S ribosomal protein L33; 50S ribosomal protein L33 809224 6161266 Lcho_0752 Leptothrix cholodnii SP-6 50S ribosomal protein L33 YP_001789790.1 809054 R 395495 CDS YP_001789791.1 171057442 6161267 complement(809242..809475) 1 NC_010524.1 required for 70S ribosome assembly; 50S ribosomal protein L28 809475 rpmB 6161267 rpmB Leptothrix cholodnii SP-6 50S ribosomal protein L28 YP_001789791.1 809242 R 395495 CDS YP_001789792.1 171057443 6161268 complement(809736..810701) 1 NC_010524.1 KEGG: mpt:Mpe_A1118 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 810701 6161268 Lcho_0754 Leptothrix cholodnii SP-6 thioredoxin reductase YP_001789792.1 809736 R 395495 CDS YP_001789793.1 171057444 6161269 811011..811679 1 NC_010524.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mpt:Mpe_A1119 catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein); Crp/FNR family transcriptional regulator 811679 6161269 Lcho_0755 Leptothrix cholodnii SP-6 Crp/FNR family transcriptional regulator YP_001789793.1 811011 D 395495 CDS YP_001789794.1 171057445 6161270 811791..814202 1 NC_010524.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: mpt:Mpe_A1120 putative cell division FtsK transmembrane protein; cell division protein FtsK 814202 6161270 Lcho_0756 Leptothrix cholodnii SP-6 cell division protein FtsK YP_001789794.1 811791 D 395495 CDS YP_001789795.1 171057446 6163026 814232..814870 1 NC_010524.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: mpt:Mpe_A1121 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 814870 6163026 Lcho_0757 Leptothrix cholodnii SP-6 outer membrane lipoprotein carrier protein LolA YP_001789795.1 814232 D 395495 CDS YP_001789796.1 171057447 6163027 814921..816264 1 NC_010524.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mpt:Mpe_A1122 recombination factor protein RarA; recombination factor protein RarA 816264 6163027 Lcho_0758 Leptothrix cholodnii SP-6 recombination factor protein RarA YP_001789796.1 814921 D 395495 CDS YP_001789797.1 171057448 6163028 816529..817464 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: mpt:Mpe_A1123 putative amino-acid transmembrane ABC transporter protein; inner-membrane translocator 817464 6163028 Lcho_0759 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001789797.1 816529 D 395495 CDS YP_001789798.1 171057449 6163029 817481..818566 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: pol:Bpro_3795 inner-membrane translocator; inner-membrane translocator 818566 6163029 Lcho_0760 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001789798.1 817481 D 395495 CDS YP_001789799.1 171057450 6163030 818577..819353 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A1125 putative ABC transporter ATP-binding protein; ABC transporter-like protein 819353 6163030 Lcho_0761 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001789799.1 818577 D 395495 CDS YP_001789800.1 171057451 6163031 819368..820093 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A1126 putative amino acid ATP-binding ABC transporter protein; ABC transporter-like protein 820093 6163031 Lcho_0762 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001789800.1 819368 D 395495 CDS YP_001789801.1 171057452 6163245 complement(820188..823040) 1 NC_010524.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 823040 6163245 Lcho_0763 Leptothrix cholodnii SP-6 phosphoenolpyruvate carboxylase YP_001789801.1 820188 R 395495 CDS YP_001789802.1 171057453 6163246 823160..824128 1 NC_010524.1 KEGG: mpt:Mpe_A3002 putative porphobilinogen deaminase protein; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; porphobilinogen deaminase 824128 6163246 Lcho_0764 Leptothrix cholodnii SP-6 porphobilinogen deaminase YP_001789802.1 823160 D 395495 CDS YP_001789803.1 171057454 6163247 824145..824948 1 NC_010524.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: mpt:Mpe_A3001 uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4 824948 6163247 Lcho_0765 Leptothrix cholodnii SP-6 uroporphyrinogen III synthase HEM4 YP_001789803.1 824145 D 395495 CDS YP_001789804.1 171057455 6163248 825178..826242 1 NC_010524.1 PFAM: protein of unknown function DUF513 hemX; KEGG: mpt:Mpe_A3000 putative uroporphyrin-III methylase; hypothetical protein 826242 6163248 Lcho_0766 Leptothrix cholodnii SP-6 hypothetical protein YP_001789804.1 825178 D 395495 CDS YP_001789805.1 171057456 6163249 826255..827502 1 NC_010524.1 PFAM: HemY domain protein; KEGG: mpt:Mpe_A2999 putative porphyrin biosynthesis-related protein; HemY domain-containing protein 827502 6163249 Lcho_0767 Leptothrix cholodnii SP-6 HemY domain-containing protein YP_001789805.1 826255 D 395495 CDS YP_001789806.1 171057457 6163685 complement(828122..829135) 1 NC_010524.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: eba:ebA495 phage-related integrase; integrase family protein 829135 6163685 Lcho_0768 Leptothrix cholodnii SP-6 integrase family protein YP_001789806.1 828122 R 395495 CDS YP_001789807.1 171057458 6163686 complement(829128..830108) 1 NC_010524.1 PFAM: integrase family protein; KEGG: eba:ebA497 phage-related integrase; integrase family protein 830108 6163686 Lcho_0769 Leptothrix cholodnii SP-6 integrase family protein YP_001789807.1 829128 R 395495 CDS YP_001789808.1 171057459 6163687 complement(830105..831358) 1 NC_010524.1 PFAM: integrase family protein; KEGG: eba:ebA499 phage-related integrase; integrase family protein 831358 6163687 Lcho_0770 Leptothrix cholodnii SP-6 integrase family protein YP_001789808.1 830105 R 395495 CDS YP_001789809.1 171057460 6163688 831851..832639 1 NC_010524.1 KEGG: nha:Nham_1149 hypothetical protein; hypothetical protein 832639 6163688 Lcho_0771 Leptothrix cholodnii SP-6 hypothetical protein YP_001789809.1 831851 D 395495 CDS YP_001789810.1 171057461 6163689 832632..835964 1 NC_010524.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: fjo:Fjoh_3576 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 835964 6163689 Lcho_0772 Leptothrix cholodnii SP-6 DEAD/DEAH box helicase YP_001789810.1 832632 D 395495 CDS YP_001789811.1 171057462 6163690 complement(836012..836683) 1 NC_010524.1 KEGG: mma:MM_2448 transposase; transposase 836683 6163690 Lcho_0773 Leptothrix cholodnii SP-6 transposase YP_001789811.1 836012 R 395495 CDS YP_001789812.1 171057463 6163974 complement(836683..837174) 1 NC_010524.1 KEGG: vei:Veis_4435 transposase; transposase 837174 6163974 Lcho_0774 Leptothrix cholodnii SP-6 transposase YP_001789812.1 836683 R 395495 CDS YP_001789813.1 171057464 6163975 complement(837820..838839) 1 NC_010524.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mlo:mlr9324 integrase/recombinase; integrase family protein 838839 6163975 Lcho_0775 Leptothrix cholodnii SP-6 integrase family protein YP_001789813.1 837820 R 395495 CDS YP_001789814.1 171057465 6163976 complement(838832..839833) 1 NC_010524.1 PFAM: integrase family protein; KEGG: eba:p2A219 putative integrase; integrase family protein 839833 6163976 Lcho_0776 Leptothrix cholodnii SP-6 integrase family protein YP_001789814.1 838832 R 395495 CDS YP_001789815.1 171057466 6163977 complement(839830..841107) 1 NC_010524.1 PFAM: integrase family protein; KEGG: eba:ebA499 phage-related integrase; integrase family protein 841107 6163977 Lcho_0777 Leptothrix cholodnii SP-6 integrase family protein YP_001789815.1 839830 R 395495 CDS YP_001789816.1 171057467 6163978 841266..841565 1 NC_010524.1 PFAM: transposase IS3/IS911 family protein; KEGG: pol:Bpro_4705 hypothetical protein; transposase IS3/IS911 family protein 841565 6163978 Lcho_0778 Leptothrix cholodnii SP-6 transposase IS3/IS911 family protein YP_001789816.1 841266 D 395495 CDS YP_001789817.1 171057468 6163979 841562..842449 1 NC_010524.1 PFAM: Integrase catalytic region; KEGG: pol:Bpro_4706 integrase, catalytic region; integrase catalytic subunit 842449 6163979 Lcho_0779 Leptothrix cholodnii SP-6 integrase catalytic subunit YP_001789817.1 841562 D 395495 CDS YP_001789818.1 171057469 6160496 843234..843719 1 NC_010524.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mpt:Mpe_A1664 single-strand binding protein; ssDNA-binding protein 843719 6160496 Lcho_0780 Leptothrix cholodnii SP-6 ssDNA-binding protein YP_001789818.1 843234 D 395495 CDS YP_001789819.1 171057470 6160497 843793..844680 1 NC_010524.1 PFAM: protein of unknown function DUF932; KEGG: mpt:Mpe_A1665 putative F plasmid protein; hypothetical protein 844680 6160497 Lcho_0781 Leptothrix cholodnii SP-6 hypothetical protein YP_001789819.1 843793 D 395495 CDS YP_001789820.1 171057471 6160498 844970..845815 1 NC_010524.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: abo:ABO_2074 ParA family protein; cobyrinic acid ac-diamide synthase 845815 6160498 Lcho_0782 Leptothrix cholodnii SP-6 cobyrinic acid ac-diamide synthase YP_001789820.1 844970 D 395495 CDS YP_001789821.1 171057472 6160499 845799..846761 1 NC_010524.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KorB domain protein; KEGG: ajs:Ajs_4306 ParB-like partition proteins; parB-like partition protein 846761 6160499 Lcho_0783 Leptothrix cholodnii SP-6 parB-like partition protein YP_001789821.1 845799 D 395495 CDS YP_001789822.1 171057473 6160500 847048..847620 1 NC_010524.1 hypothetical protein 847620 6160500 Lcho_0784 Leptothrix cholodnii SP-6 hypothetical protein YP_001789822.1 847048 D 395495 CDS YP_001789823.1 171057474 6160501 847637..848602 1 NC_010524.1 KEGG: bxe:Bxe_C0462 putative DNA relaxase/nickase, TraS/VirD2-like; putative DNA relaxase/nickase, TraS/VirD2-like protein 848602 6160501 Lcho_0785 Leptothrix cholodnii SP-6 putative DNA relaxase/nickase, TraS/VirD2-like protein YP_001789823.1 847637 D 395495 CDS YP_001789824.1 171057475 6160730 complement(848838..849089) 1 NC_010524.1 hypothetical protein 849089 6160730 Lcho_0786 Leptothrix cholodnii SP-6 hypothetical protein YP_001789824.1 848838 R 395495 CDS YP_001789825.1 171057476 6160732 850256..850888 1 NC_010524.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: rfr:Rfer_2534 NADP oxidoreductase, coenzyme F420-dependent; coenzyme F420-dependent NADP oxidoreductase 850888 6160732 Lcho_0788 Leptothrix cholodnii SP-6 coenzyme F420-dependent NADP oxidoreductase YP_001789825.1 850256 D 395495 CDS YP_001789826.1 171057477 6160733 850972..851592 1 NC_010524.1 PFAM: phospholipase/Carboxylesterase; KEGG: mmw:Mmwyl1_0129 phospholipase/carboxylesterase; phospholipase/carboxylesterase 851592 6160733 Lcho_0789 Leptothrix cholodnii SP-6 phospholipase/carboxylesterase YP_001789826.1 850972 D 395495 CDS YP_001789827.1 171057478 6160734 complement(851667..852386) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_0990 ABC transporter related; ABC transporter-like protein 852386 6160734 Lcho_0790 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001789827.1 851667 R 395495 CDS YP_001789828.1 171057479 6160735 complement(852397..853143) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_0989 ABC transporter related; ABC transporter-like protein 853143 6160735 Lcho_0791 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001789828.1 852397 R 395495 CDS YP_001789829.1 171057480 6161146 complement(853143..854150) 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: pol:Bpro_0988 inner-membrane translocator; inner-membrane translocator 854150 6161146 Lcho_0792 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001789829.1 853143 R 395495 CDS YP_001789830.1 171057481 6161147 complement(854163..855083) 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: pol:Bpro_0987 inner-membrane translocator; inner-membrane translocator 855083 6161147 Lcho_0793 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001789830.1 854163 R 395495 CDS YP_001789831.1 171057482 6161148 complement(855094..856254) 1 NC_010524.1 PFAM: Extracellular ligand-binding receptor; KEGG: pol:Bpro_0986 extracellular ligand-binding receptor; extracellular ligand-binding receptor 856254 6161148 Lcho_0794 Leptothrix cholodnii SP-6 extracellular ligand-binding receptor YP_001789831.1 855094 R 395495 CDS YP_001789832.1 171057483 6161149 complement(856330..856647) 1 NC_010524.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: pol:Bpro_0985 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 856647 6161149 Lcho_0795 Leptothrix cholodnii SP-6 Rieske (2Fe-2S) domain-containing protein YP_001789832.1 856330 R 395495 CDS YP_001789833.1 171057484 6161150 complement(856656..857138) 1 NC_010524.1 PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: aav:Aave_0166 aromatic-ring-hydroxylating dioxygenase, beta subunit; aromatic-ring-hydroxylating dioxygenase subunit beta 857138 6161150 Lcho_0796 Leptothrix cholodnii SP-6 aromatic-ring-hydroxylating dioxygenase subunit beta YP_001789833.1 856656 R 395495 CDS YP_001789834.1 171057485 6161151 complement(857142..858401) 1 NC_010524.1 PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: pol:Bpro_0983 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 858401 6161151 Lcho_0797 Leptothrix cholodnii SP-6 Rieske (2Fe-2S) domain-containing protein YP_001789834.1 857142 R 395495 CDS YP_001789835.1 171057486 6161114 complement(858432..859127) 1 NC_010524.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pol:Bpro_0982 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 859127 6161114 Lcho_0798 Leptothrix cholodnii SP-6 fumarylacetoacetate (FAA) hydrolase YP_001789835.1 858432 R 395495 CDS YP_001789836.1 171057487 6161115 complement(859151..860197) 1 NC_010524.1 TIGRFAM: gentisate 1,2-dioxygenase; PFAM: Cupin 2 conserved barrel domain protein; KEGG: pol:Bpro_0981 gentisate 1,2-dioxygenase; gentisate 1,2-dioxygenase 860197 6161115 Lcho_0799 Leptothrix cholodnii SP-6 gentisate 1,2-dioxygenase YP_001789836.1 859151 R 395495 CDS YP_001789837.1 171057488 6161116 complement(860209..861195) 1 NC_010524.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pol:Bpro_0980 oxidoreductase FAD-binding region; oxidoreductase FAD-binding subunit 861195 6161116 Lcho_0800 Leptothrix cholodnii SP-6 oxidoreductase FAD-binding subunit YP_001789837.1 860209 R 395495 CDS YP_001789838.1 171057489 6161117 861311..862240 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_0979 transcriptional regulator, LysR family; LysR family transcriptional regulator 862240 6161117 Lcho_0801 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001789838.1 861311 D 395495 CDS YP_001789839.1 171057490 6161118 862368..863651 1 NC_010524.1 PFAM: helix-turn-helix Fis-type; GAF domain protein; KEGG: pol:Bpro_5567 putative transcriptional regulator, fis family; Fis family transcriptional regulator 863651 6161118 Lcho_0802 Leptothrix cholodnii SP-6 Fis family transcriptional regulator YP_001789839.1 862368 D 395495 CDS YP_001789840.1 171057491 6161119 863769..865514 1 NC_010524.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: pde:Pden_0181 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 865514 6161119 Lcho_0803 Leptothrix cholodnii SP-6 glucose-methanol-choline oxidoreductase YP_001789840.1 863769 D 395495 CDS YP_001789841.1 171057492 6162146 865553..867004 1 NC_010524.1 PFAM: Aldehyde Dehydrogenase_; KEGG: pde:Pden_0180 aldehyde dehydrogenase; aldehyde dehydrogenase 867004 6162146 Lcho_0804 Leptothrix cholodnii SP-6 aldehyde dehydrogenase YP_001789841.1 865553 D 395495 CDS YP_001789842.1 171057493 6162147 complement(867082..868137) 1 NC_010524.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: mmr:Mmar10_0276 transcriptional regulator, LacI family; LacI family transcriptional regulator 868137 6162147 Lcho_0805 Leptothrix cholodnii SP-6 LacI family transcriptional regulator YP_001789842.1 867082 R 395495 CDS YP_001789843.1 171057494 6162148 complement(868242..869501) 1 NC_010524.1 PFAM: major facilitator superfamily MFS_1; KEGG: aau:AAur_0659 putative major facilitator superfamily (MFS) transporter; major facilitator transporter 869501 6162148 Lcho_0806 Leptothrix cholodnii SP-6 major facilitator transporter YP_001789843.1 868242 R 395495 CDS YP_001789844.1 171057495 6162149 complement(869511..871175) 1 NC_010524.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: rle:RL4489 putative glycosyl hydrolase; glycoside hydrolase family 3 871175 6162149 Lcho_0807 Leptothrix cholodnii SP-6 glycoside hydrolase family 3 YP_001789844.1 869511 R 395495 CDS YP_001789845.1 171057496 6162150 complement(871247..873448) 1 NC_010524.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_1901 TonB-dependent receptor; TonB-dependent receptor 873448 6162150 Lcho_0808 Leptothrix cholodnii SP-6 TonB-dependent receptor YP_001789845.1 871247 R 395495 CDS YP_001789846.1 171057497 6162151 complement(873622..874473) 1 NC_010524.1 PFAM: alpha/beta hydrolase fold; KEGG: fre:Franean1_0952 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 874473 6162151 Lcho_0809 Leptothrix cholodnii SP-6 alpha/beta hydrolase fold protein YP_001789846.1 873622 R 395495 CDS YP_001789847.1 171057498 6162976 complement(874477..875304) 1 NC_010524.1 KEGG: nar:Saro_1725 hypothetical protein; hypothetical protein 875304 6162976 Lcho_0810 Leptothrix cholodnii SP-6 hypothetical protein YP_001789847.1 874477 R 395495 CDS YP_001789848.1 171057499 6162977 complement(875333..876529) 1 NC_010524.1 KEGG: bur:Bcep18194_A5004 hypothetical protein; hypothetical protein 876529 6162977 Lcho_0811 Leptothrix cholodnii SP-6 hypothetical protein YP_001789848.1 875333 R 395495 CDS YP_001789849.1 171057500 6162978 complement(876539..876967) 1 NC_010524.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mms:mma_0247 biopolymer transport protein ExbD; biopolymer transport protein ExbD/TolR 876967 6162978 Lcho_0812 Leptothrix cholodnii SP-6 biopolymer transport protein ExbD/TolR YP_001789849.1 876539 R 395495 CDS YP_001789850.1 171057501 6162979 complement(876978..877388) 1 NC_010524.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mpt:Mpe_A1756 biopolymer transport ExbD protein; biopolymer transport protein ExbD/TolR 877388 6162979 Lcho_0813 Leptothrix cholodnii SP-6 biopolymer transport protein ExbD/TolR YP_001789850.1 876978 R 395495 CDS YP_001789851.1 171057502 6162980 complement(877453..878250) 1 NC_010524.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mpt:Mpe_A1755 biopolymer transport ExbB protein; MotA/TolQ/ExbB proton channel 878250 6162980 Lcho_0814 Leptothrix cholodnii SP-6 MotA/TolQ/ExbB proton channel YP_001789851.1 877453 R 395495 CDS YP_001789852.1 171057503 6162981 complement(878337..879011) 1 NC_010524.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: mag:amb3549 periplasmic protein TonB, links inner and outer membranes; TonB family protein 879011 6162981 Lcho_0815 Leptothrix cholodnii SP-6 TonB family protein YP_001789852.1 878337 R 395495 CDS YP_001789853.1 171057504 6163601 complement(879500..880369) 1 NC_010524.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pde:Pden_0188 regulatory proteins, IclR; IclR family transcriptional regulator 880369 6163601 Lcho_0816 Leptothrix cholodnii SP-6 IclR family transcriptional regulator YP_001789853.1 879500 R 395495 CDS YP_001789854.1 171057505 6163602 complement(880451..881206) 1 NC_010524.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pde:Pden_0192 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 881206 6163602 Lcho_0817 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001789854.1 880451 R 395495 CDS YP_001789855.1 171057506 6163603 complement(881321..882550) 1 NC_010524.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pde:Pden_0195 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 882550 6163603 Lcho_0818 Leptothrix cholodnii SP-6 L-carnitine dehydratase/bile acid-inducible protein F YP_001789855.1 881321 R 395495 CDS YP_001789856.1 171057507 6163604 complement(882550..883428) 1 NC_010524.1 KEGG: pde:Pden_0194 hypothetical protein; hypothetical protein 883428 6163604 Lcho_0819 Leptothrix cholodnii SP-6 hypothetical protein YP_001789856.1 882550 R 395495 CDS YP_001789857.1 171057508 6163605 883666..884088 1 NC_010524.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pde:Pden_0191 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 884088 6163605 Lcho_0820 Leptothrix cholodnii SP-6 glyoxalase/bleomycin resistance protein/dioxygenase YP_001789857.1 883666 D 395495 CDS YP_001789858.1 171057509 6163606 884121..885179 1 NC_010524.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: reu:Reut_B5224 TRAP dicarboxylate transporter-DctP subunit; TRAP dicarboxylate transporter subunit Dctp 885179 6163606 Lcho_0821 Leptothrix cholodnii SP-6 TRAP dicarboxylate transporter subunit Dctp YP_001789858.1 884121 D 395495 CDS YP_001789859.1 171057510 6163383 885208..887094 1 NC_010524.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vei:Veis_4815 TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP C4-dicarboxylate transport system permease DctM 887094 6163383 Lcho_0822 Leptothrix cholodnii SP-6 TRAP C4-dicarboxylate transport system permease DctM YP_001789859.1 885208 D 395495 CDS YP_001789860.1 171057511 6163384 887123..888046 1 NC_010524.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: mxa:MXAN_5469 male sterility protein-like protein; NAD-dependent epimerase/dehydratase 888046 6163384 Lcho_0823 Leptothrix cholodnii SP-6 NAD-dependent epimerase/dehydratase YP_001789860.1 887123 D 395495 CDS YP_001789861.1 171057512 6163385 888058..888828 1 NC_010524.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pde:Pden_0196 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 888828 6163385 Lcho_0824 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001789861.1 888058 D 395495 CDS YP_001789862.1 171057513 6163386 888870..889280 1 NC_010524.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: rha:RHA1_ro00659 possible WhiE protein; cupin 889280 6163386 Lcho_0825 Leptothrix cholodnii SP-6 cupin YP_001789862.1 888870 D 395495 CDS YP_001789863.1 171057514 6163387 889313..889636 1 NC_010524.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pna:Pnap_2814 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 889636 6163387 Lcho_0826 Leptothrix cholodnii SP-6 antibiotic biosynthesis monooxygenase YP_001789863.1 889313 D 395495 CDS YP_001789864.1 171057515 6163388 889633..890184 1 NC_010524.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: har:HEAR2599 hypothetical protein; hemerythrin HHE cation-binding domain-containing protein 890184 6163388 Lcho_0827 Leptothrix cholodnii SP-6 hemerythrin HHE cation-binding domain-containing protein YP_001789864.1 889633 D 395495 CDS YP_001789865.1 171057516 6160639 complement(890213..891118) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_3339 transcriptional regulator, LysR family; LysR family transcriptional regulator 891118 6160639 Lcho_0828 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001789865.1 890213 R 395495 CDS YP_001789866.1 171057517 6160640 891261..891464 1 NC_010524.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: rso:RS05436 hypothetical protein; 4-oxalocrotonate tautomerase 891464 6160640 Lcho_0829 Leptothrix cholodnii SP-6 4-oxalocrotonate tautomerase YP_001789866.1 891261 D 395495 CDS YP_001789867.1 171057518 6160641 complement(891479..891892) 1 NC_010524.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: mpt:Mpe_A0409 hypothetical protein; glutathione-dependent formaldehyde-activating protein 891892 6160641 Lcho_0830 Leptothrix cholodnii SP-6 glutathione-dependent formaldehyde-activating protein YP_001789867.1 891479 R 395495 CDS YP_001789868.1 171057519 6160642 complement(891945..893147) 1 NC_010524.1 KEGG: pol:Bpro_1231 beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; beta-ketoadipyl CoA thiolase 893147 6160642 Lcho_0831 Leptothrix cholodnii SP-6 beta-ketoadipyl CoA thiolase YP_001789868.1 891945 R 395495 CDS YP_001789869.1 171057520 6160643 complement(893152..893814) 1 NC_010524.1 KEGG: rso:RSc2253 probable 3-oxoadipate CoA-transferase subunit B protein; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 893814 6160643 Lcho_0832 Leptothrix cholodnii SP-6 3-oxoacid CoA-transferase subunit B YP_001789869.1 893152 R 395495 CDS YP_001789870.1 171057521 6160644 complement(893825..894526) 1 NC_010524.1 KEGG: aav:Aave_3946 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 894526 6160644 Lcho_0833 Leptothrix cholodnii SP-6 3-oxoacid CoA-transferase subunit A YP_001789870.1 893825 R 395495 CDS YP_001789871.1 171057522 6161490 complement(894529..895413) 1 NC_010524.1 PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bur:Bcep18194_A4486 intradiol ring-cleavage dioxygenase; intradiol ring-cleavage dioxygenase 895413 6161490 Lcho_0834 Leptothrix cholodnii SP-6 intradiol ring-cleavage dioxygenase YP_001789871.1 894529 R 395495 CDS YP_001789872.1 171057523 6161491 895531..896454 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4487 transcriptional regulator, LysR family; LysR family transcriptional regulator 896454 6161491 Lcho_0835 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001789872.1 895531 D 395495 CDS YP_001789873.1 171057524 6161492 896638..896946 1 NC_010524.1 PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: bam:Bamb_3334 stress responsive alpha-beta barrel domain protein; stress responsive alpha-beta barrel domain-containing protein 896946 6161492 Lcho_0836 Leptothrix cholodnii SP-6 stress responsive alpha-beta barrel domain-containing protein YP_001789873.1 896638 D 395495 CDS YP_001789874.1 171057525 6161493 896949..898019 1 NC_010524.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: pol:Bpro_2063 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 898019 6161493 Lcho_0837 Leptothrix cholodnii SP-6 iron-containing alcohol dehydrogenase YP_001789874.1 896949 D 395495 CDS YP_001789875.1 171057526 6161494 898088..899191 1 NC_010524.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rha:RHA1_ro02994 possible oxidoreductase; oxidoreductase domain-containing protein 899191 6161494 Lcho_0838 Leptothrix cholodnii SP-6 oxidoreductase domain-containing protein YP_001789875.1 898088 D 395495 CDS YP_001789876.1 171057527 6161495 899188..900066 1 NC_010524.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bam:Bamb_3326 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 900066 6161495 Lcho_0839 Leptothrix cholodnii SP-6 xylose isomerase domain-containing protein YP_001789876.1 899188 D 395495 CDS YP_001789877.1 171057528 6161635 900087..901082 1 NC_010524.1 PFAM: oxidoreductase domain protein; dihydrodipicolinate reductase; Oxidoreductase domain; KEGG: acr:Acry_2329 inositol 2-dehydrogenase; inositol 2-dehydrogenase 901082 6161635 Lcho_0840 Leptothrix cholodnii SP-6 inositol 2-dehydrogenase YP_001789877.1 900087 D 395495 CDS YP_001789878.1 171057529 6161636 901202..902269 1 NC_010524.1 KEGG: rha:RHA1_ro00226 ABC sugar transporter, periplasmic solute-binding protein; sugar ABC transporter substrate-binding protein 902269 6161636 Lcho_0841 Leptothrix cholodnii SP-6 sugar ABC transporter substrate-binding protein YP_001789878.1 901202 D 395495 CDS YP_001789879.1 171057530 6161637 902334..903149 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nca:Noca_2377 ABC transporter related; ABC transporter-like protein 903149 6161637 Lcho_0842 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001789879.1 902334 D 395495 CDS YP_001789880.1 171057531 6161638 903176..904399 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: pde:Pden_1034 inner-membrane translocator; inner-membrane translocator 904399 6161638 Lcho_0843 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001789880.1 903176 D 395495 CDS YP_001789881.1 171057532 6161639 complement(904419..905621) 1 NC_010524.1 KEGG: rfr:Rfer_0226 beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; beta-ketoadipyl CoA thiolase 905621 6161639 Lcho_0844 Leptothrix cholodnii SP-6 beta-ketoadipyl CoA thiolase YP_001789881.1 904419 R 395495 CDS YP_001789882.1 171057533 6161640 complement(905679..907742) 1 NC_010524.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: pna:Pnap_2135 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase 907742 6161640 Lcho_0845 Leptothrix cholodnii SP-6 3-hydroxyacyl-CoA dehydrogenase YP_001789882.1 905679 R 395495 CDS YP_001789883.1 171057534 6160779 complement(907771..909018) 1 NC_010524.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bmu:Bmul_1907 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 909018 6160779 Lcho_0846 Leptothrix cholodnii SP-6 L-carnitine dehydratase/bile acid-inducible protein F YP_001789883.1 907771 R 395495 CDS YP_001789884.1 171057535 6160780 complement(909025..910185) 1 NC_010524.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rme:Rmet_5908 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 910185 6160780 Lcho_0847 Leptothrix cholodnii SP-6 acyl-CoA dehydrogenase domain-containing protein YP_001789884.1 909025 R 395495 CDS YP_001789885.1 171057536 6160781 complement(910214..910579) 1 NC_010524.1 PFAM: cytochrome c class I; KEGG: gtn:GTNG_2417 membrane-attached cytochrome c550; cytochrome c class I 910579 6160781 Lcho_0848 Leptothrix cholodnii SP-6 cytochrome c class I YP_001789885.1 910214 R 395495 CDS YP_001789886.1 171057537 6160782 complement(910587..912173) 1 NC_010524.1 PFAM: Pyrrolo-quinoline quinone; KEGG: bbt:BBta_2326 putative quinoprotein; Pyrrolo-quinoline quinone 912173 6160782 Lcho_0849 Leptothrix cholodnii SP-6 Pyrrolo-quinoline quinone YP_001789886.1 910587 R 395495 CDS YP_001789887.1 171057538 6160783 complement(912192..912551) 1 NC_010524.1 KEGG: mpt:Mpe_A1596 hypothetical protein; hypothetical protein 912551 6160783 Lcho_0850 Leptothrix cholodnii SP-6 hypothetical protein YP_001789887.1 912192 R 395495 CDS YP_001789888.1 171057539 6160784 complement(912555..914231) 1 NC_010524.1 PFAM: Pyrrolo-quinoline quinone; KEGG: mpt:Mpe_A1595 putative alcohol dehydrogenase; Pyrrolo-quinoline quinone 914231 6160784 Lcho_0851 Leptothrix cholodnii SP-6 Pyrrolo-quinoline quinone YP_001789888.1 912555 R 395495 CDS YP_001789889.1 171057540 6160411 complement(914341..915438) 1 NC_010524.1 PFAM: luciferase family protein; KEGG: pde:Pden_0203 luciferase family protein; luciferase family protein 915438 6160411 Lcho_0852 Leptothrix cholodnii SP-6 luciferase family protein YP_001789889.1 914341 R 395495 CDS YP_001789890.1 171057541 6160412 complement(915515..916072) 1 NC_010524.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: nar:Saro_3612 flavin reductase domain protein, FMN-binding; flavin reductase domain-containing protein 916072 6160412 Lcho_0853 Leptothrix cholodnii SP-6 flavin reductase domain-containing protein YP_001789890.1 915515 R 395495 CDS YP_001789891.1 171057542 6160413 916412..918391 1 NC_010524.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pap:PSPA7_0941 transcriptional regulator AcoR; Fis family GAF modulated sigma54 specific transcriptional regulator 918391 6160413 Lcho_0854 Leptothrix cholodnii SP-6 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001789891.1 916412 D 395495 CDS YP_001789892.1 171057543 6160414 918572..919789 1 NC_010524.1 KEGG: stp:Strop_1877 GTP cyclohydrolase II; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase 919789 6160414 Lcho_0855 Leptothrix cholodnii SP-6 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001789892.1 918572 D 395495 CDS YP_001789893.1 171057544 6160415 919833..921272 1 NC_010524.1 PFAM: Aldehyde Dehydrogenase_; KEGG: pol:Bpro_0086 aldehyde dehydrogenase; aldehyde dehydrogenase 921272 6160415 Lcho_0856 Leptothrix cholodnii SP-6 aldehyde dehydrogenase YP_001789893.1 919833 D 395495 CDS YP_001789894.1 171057545 6160416 921324..922073 1 NC_010524.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ajs:Ajs_2810 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein alpha/beta-subunit 922073 6160416 Lcho_0857 Leptothrix cholodnii SP-6 electron transfer flavoprotein alpha/beta-subunit YP_001789894.1 921324 D 395495 CDS YP_001789895.1 171057546 6160361 922076..923005 1 NC_010524.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: ajs:Ajs_2809 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 923005 6160361 Lcho_0858 Leptothrix cholodnii SP-6 electron transfer flavoprotein subunit alpha YP_001789895.1 922076 D 395495 CDS YP_001789896.1 171057547 6160362 923077..923967 1 NC_010524.1 KEGG: pdi:BDI_2988 periplasmic component of the Tol biopolymer transport system; periplasmic component of the Tol biopolymer transport system 923967 6160362 Lcho_0859 Leptothrix cholodnii SP-6 periplasmic component of the Tol biopolymer transport system YP_001789896.1 923077 D 395495 CDS YP_001789897.1 171057548 6160363 complement(924059..925174) 1 NC_010524.1 KEGG: mpt:Mpe_A1675 hypothetical protein; hypothetical protein 925174 6160363 Lcho_0860 Leptothrix cholodnii SP-6 hypothetical protein YP_001789897.1 924059 R 395495 CDS YP_001789898.1 171057549 6160364 complement(925214..925906) 1 NC_010524.1 PFAM: OmpA/MotB domain protein; KEGG: mpt:Mpe_A1676 hypothetical protein; OmpA/MotB domain-containing protein 925906 6160364 Lcho_0861 Leptothrix cholodnii SP-6 OmpA/MotB domain-containing protein YP_001789898.1 925214 R 395495 CDS YP_001789899.1 171057550 6160365 complement(925925..927958) 1 NC_010524.1 PFAM: TRAG family protein; KEGG: bxe:Bxe_C0458 putative type IV secretory pathway protein VirD4; TRAG family protein 927958 6160365 Lcho_0862 Leptothrix cholodnii SP-6 TRAG family protein YP_001789899.1 925925 R 395495 CDS YP_001789900.1 171057551 6160366 complement(927955..929061) 1 NC_010524.1 TIGRFAM: P-type DNA transfer ATPase VirB11; PFAM: type II secretion system protein E; KEGG: mpt:Mpe_A1678 type IV secretory pathway, VirB11 component; P-type DNA transfer ATPase VirB11 929061 6160366 Lcho_0863 Leptothrix cholodnii SP-6 P-type DNA transfer ATPase VirB11 YP_001789900.1 927955 R 395495 CDS YP_001789901.1 171057552 6161701 complement(929082..930560) 1 NC_010524.1 PFAM: conjugation TrbI family protein; KEGG: mpt:Mpe_A1679 type IV secretory pathway, VirB10 component; conjugation TrbI family protein 930560 6161701 Lcho_0864 Leptothrix cholodnii SP-6 conjugation TrbI family protein YP_001789901.1 929082 R 395495 CDS YP_001789902.1 171057553 6161702 complement(930553..931500) 1 NC_010524.1 PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: mpt:Mpe_A1680 type IV secretory pathway, VirB9 component; conjugal transfer protein TrbG/VirB9/CagX 931500 6161702 Lcho_0865 Leptothrix cholodnii SP-6 conjugal transfer protein TrbG/VirB9/CagX YP_001789902.1 930553 R 395495 CDS YP_001789903.1 171057554 6161703 complement(931497..932369) 1 NC_010524.1 PFAM: VirB8 family protein; KEGG: mpt:Mpe_A1681 type IV secretory pathway, VirB8 component; VirB8 family protein 932369 6161703 Lcho_0866 Leptothrix cholodnii SP-6 VirB8 family protein YP_001789903.1 931497 R 395495 CDS YP_001789904.1 171057555 6161704 complement(932385..933101) 1 NC_010524.1 PFAM: type IV secretion system family protein; KEGG: bxe:Bxe_C0452 putative type IV secretion system protein VirB5/TraF; type IV secretion system family protein 933101 6161704 Lcho_0867 Leptothrix cholodnii SP-6 type IV secretion system family protein YP_001789904.1 932385 R 395495 CDS YP_001789905.1 171057556 6161705 complement(933191..934228) 1 NC_010524.1 PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: bxe:Bxe_A2654 putative type IV secretion system protein VirB6/TraH; TrbL/VirB6 plasmid conjugal transfer protein 934228 6161705 Lcho_0868 Leptothrix cholodnii SP-6 TrbL/VirB6 plasmid conjugal transfer protein YP_001789905.1 933191 R 395495 CDS YP_001789906.1 171057557 6161706 complement(934239..934658) 1 NC_010524.1 hypothetical protein 934658 6161706 Lcho_0869 Leptothrix cholodnii SP-6 hypothetical protein YP_001789906.1 934239 R 395495 CDS YP_001789907.1 171057558 6163590 complement(934655..937147) 1 NC_010524.1 TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE TrbE VirB component of type IV transporter system; KEGG: bxe:Bxe_C0450 putative type IV secretion system protein VirB4/TraE; type IV secretion/conjugal transfer ATPase 937147 6163590 Lcho_0870 Leptothrix cholodnii SP-6 type IV secretion/conjugal transfer ATPase YP_001789907.1 934655 R 395495 CDS YP_001789908.1 171057559 6163591 complement(937131..937463) 1 NC_010524.1 PFAM: type IV secretory pathway VirB3 family protein; KEGG: bch:Bcen2424_3314 type IV secretory pathway, VirB3 family protein; type IV secretory pathway VirB3 family protein 937463 6163591 Lcho_0871 Leptothrix cholodnii SP-6 type IV secretory pathway VirB3 family protein YP_001789908.1 937131 R 395495 CDS YP_001789909.1 171057560 6163592 complement(937482..937772) 1 NC_010524.1 PFAM: Conjugal transfer protein TrbC; KEGG: bcs:BCAN_B0071 TraC protein; conjugal transfer protein TrbC 937772 6163592 Lcho_0872 Leptothrix cholodnii SP-6 conjugal transfer protein TrbC YP_001789909.1 937482 R 395495 CDS YP_001789910.1 171057561 6163593 complement(937794..938303) 1 NC_010524.1 PFAM: Lytic transglycosylase catalytic; KEGG: bmu:Bmul_3753 lytic transglycosylase catalytic; lytic transglycosylase catalytic subunit 938303 6163593 Lcho_0873 Leptothrix cholodnii SP-6 lytic transglycosylase catalytic subunit YP_001789910.1 937794 R 395495 CDS YP_001789911.1 171057562 6163594 complement(938318..938878) 1 NC_010524.1 KEGG: bxe:Bxe_A1752 hypothetical protein; hypothetical protein 938878 6163594 Lcho_0874 Leptothrix cholodnii SP-6 hypothetical protein YP_001789911.1 938318 R 395495 CDS YP_001789912.1 171057563 6163595 complement(938995..939759) 1 NC_010524.1 PFAM: regulatory protein LuxR; KEGG: mpt:Mpe_A1685 hypothetical protein; LuxR family transcriptional regulator 939759 6163595 Lcho_0875 Leptothrix cholodnii SP-6 LuxR family transcriptional regulator YP_001789912.1 938995 R 395495 CDS YP_001789913.1 171057564 6163564 complement(939833..940183) 1 NC_010524.1 hypothetical protein 940183 6163564 Lcho_0876 Leptothrix cholodnii SP-6 hypothetical protein YP_001789913.1 939833 R 395495 CDS YP_001789914.1 171057565 6163565 complement(940530..940955) 1 NC_010524.1 KEGG: mpt:Mpe_A1683 hypothetical protein; hypothetical protein 940955 6163565 Lcho_0877 Leptothrix cholodnii SP-6 hypothetical protein YP_001789914.1 940530 R 395495 CDS YP_001789915.1 171057566 6163566 941264..942208 1 NC_010524.1 PFAM: fatty acid desaturase; KEGG: bxe:Bxe_A1748 putative fatty acid desaturase; fatty acid desaturase 942208 6163566 Lcho_0878 Leptothrix cholodnii SP-6 fatty acid desaturase YP_001789915.1 941264 D 395495 CDS YP_001789916.1 171057567 6163567 942205..943455 1 NC_010524.1 KEGG: bxe:Bxe_A2669 hypothetical protein; hypothetical protein 943455 6163567 Lcho_0879 Leptothrix cholodnii SP-6 hypothetical protein YP_001789916.1 942205 D 395495 CDS YP_001789917.1 171057568 6163568 complement(943524..944378) 1 NC_010524.1 specific inhibitor of chromosomal initiation of replication in vitro; inds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 944378 6163568 Lcho_0880 Leptothrix cholodnii SP-6 chromosome replication initiation inhibitor protein YP_001789917.1 943524 R 395495 CDS YP_001789918.1 171057569 6163569 944832..945140 1 NC_010524.1 hypothetical protein 945140 6163569 Lcho_0881 Leptothrix cholodnii SP-6 hypothetical protein YP_001789918.1 944832 D 395495 CDS YP_001789919.1 171057570 6163194 complement(945163..945390) 1 NC_010524.1 PFAM: Prophage CP4-57 regulatory; KEGG: hha:Hhal_1156 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA 945390 6163194 Lcho_0882 Leptothrix cholodnii SP-6 phage transcriptional regulator AlpA YP_001789919.1 945163 R 395495 CDS YP_001789920.1 171057571 6163195 945558..946538 1 NC_010524.1 PFAM: Integrase catalytic region; KEGG: bxe:Bxe_B0052 putative transposase; integrase catalytic subunit 946538 6163195 Lcho_0883 Leptothrix cholodnii SP-6 integrase catalytic subunit YP_001789920.1 945558 D 395495 CDS YP_001789921.1 171057572 6163196 complement(946909..948333) 1 NC_010524.1 PFAM: carbohydrate kinase FGGY; KEGG: ace:Acel_0722 carbohydrate kinase, FGGY; carbohydrate kinase FGGY 948333 6163196 Lcho_0884 Leptothrix cholodnii SP-6 carbohydrate kinase FGGY YP_001789921.1 946909 R 395495 CDS YP_001789922.1 171057573 6163197 complement(948356..949357) 1 NC_010524.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sen:SACE_4163 zinc-binding dehydrogenase; alcohol dehydrogenase 949357 6163197 Lcho_0885 Leptothrix cholodnii SP-6 alcohol dehydrogenase YP_001789922.1 948356 R 395495 CDS YP_001789923.1 171057574 6163198 complement(949423..950205) 1 NC_010524.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ace:Acel_0721 fructose-bisphosphate aldolase; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 950205 6163198 Lcho_0886 Leptothrix cholodnii SP-6 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_001789923.1 949423 R 395495 CDS YP_001789924.1 171057575 6163199 950483..951244 1 NC_010524.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: sme:SMc02340 putative transcription regulator protein; GntR family transcriptional regulator 951244 6163199 Lcho_0887 Leptothrix cholodnii SP-6 GntR family transcriptional regulator YP_001789924.1 950483 D 395495 CDS YP_001789925.1 171057576 6162608 951408..951569 1 NC_010524.1 hypothetical protein 951569 6162608 Lcho_0888 Leptothrix cholodnii SP-6 hypothetical protein YP_001789925.1 951408 D 395495 CDS YP_001789926.1 171057577 6162609 951782..953089 1 NC_010524.1 PFAM: extracellular solute-binding protein family 1; KEGG: pde:Pden_4845 extracellular solute-binding protein, family 1; extracellular solute-binding protein 953089 6162609 Lcho_0889 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001789926.1 951782 D 395495 CDS YP_001789927.1 171057578 6162610 953207..954049 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_3853 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 954049 6162610 Lcho_0890 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001789927.1 953207 D 395495 CDS YP_001789928.1 171057579 6162611 954046..954876 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_3852 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 954876 6162611 Lcho_0891 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001789928.1 954046 D 395495 CDS YP_001789929.1 171057580 6162612 954895..955968 1 NC_010524.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: csa:Csal_2614 ABC transporter related; ABC transporter-like protein 955968 6162612 Lcho_0892 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001789929.1 954895 D 395495 CDS YP_001789930.1 171057581 6162613 955998..957638 1 NC_010524.1 PFAM: Dak kinase; Dak phosphatase; KEGG: ret:RHE_CH02988 dihydroxyacetone kinase protein; Glycerone kinase 957638 6162613 Lcho_0893 Leptothrix cholodnii SP-6 Glycerone kinase YP_001789930.1 955998 D 395495 CDS YP_001789931.1 171057582 6162358 957669..959072 1 NC_010524.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: vei:Veis_3167 mannitol dehydrogenase, C-terminal domain; mannitol dehydrogenase domain-containing protein 959072 6162358 Lcho_0894 Leptothrix cholodnii SP-6 mannitol dehydrogenase domain-containing protein YP_001789931.1 957669 D 395495 CDS YP_001789932.1 171057583 6162359 959122..960030 1 NC_010524.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: vei:Veis_3165 helix-turn-helix-domain containing protein, AraC type; AraC family transcriptional regulator 960030 6162359 Lcho_0895 Leptothrix cholodnii SP-6 AraC family transcriptional regulator YP_001789932.1 959122 D 395495 CDS YP_001789933.1 171057584 6162360 complement(960432..961652) 1 NC_010524.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: aav:Aave_4624 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 961652 6162360 Lcho_0896 Leptothrix cholodnii SP-6 filamentation induced by cAMP protein fic YP_001789933.1 960432 R 395495 CDS YP_001789934.1 171057585 6162361 complement(961895..963556) 1 NC_010524.1 PFAM: integrase family protein; KEGG: dar:Daro_2526 phage integrase; integrase family protein 963556 6162361 Lcho_0897 Leptothrix cholodnii SP-6 integrase family protein YP_001789934.1 961895 R 395495 CDS YP_001789935.1 171057586 6162362 963986..964120 1 NC_010524.1 hypothetical protein 964120 6162362 Lcho_0898 Leptothrix cholodnii SP-6 hypothetical protein YP_001789935.1 963986 D 395495 CDS YP_001789936.1 171057587 6162363 964166..964819 1 NC_010524.1 KEGG: art:Arth_3462 phosphoribosyltransferase; phosphoribosyltransferase 964819 6162363 Lcho_0899 Leptothrix cholodnii SP-6 phosphoribosyltransferase YP_001789936.1 964166 D 395495 CDS YP_001789937.1 171057588 6162215 964816..965424 1 NC_010524.1 KEGG: aeh:Mlg_1733 phosphoribosyltransferase; phosphoribosyltransferase 965424 6162215 Lcho_0900 Leptothrix cholodnii SP-6 phosphoribosyltransferase YP_001789937.1 964816 D 395495 CDS YP_001789938.1 171057589 6162216 complement(965441..966148) 1 NC_010524.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bte:BTH_II1247 DNA-binding response regulator, LuxR family; two component LuxR family transcriptional regulator 966148 6162216 Lcho_0901 Leptothrix cholodnii SP-6 two component LuxR family transcriptional regulator YP_001789938.1 965441 R 395495 CDS YP_001789939.1 171057590 6162217 complement(966145..967674) 1 NC_010524.1 KEGG: reh:H16_A1985 signal transduction histidine kinase containing PAS/PAC sensor domain; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 967674 6162217 Lcho_0902 Leptothrix cholodnii SP-6 PAS/PAC sensor signal transduction histidine kinase YP_001789939.1 966145 R 395495 CDS YP_001789940.1 171057591 6162218 968198..969061 1 NC_010524.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: pna:Pnap_0792 putative transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 969061 6162218 Lcho_0903 Leptothrix cholodnii SP-6 Crp/FNR family transcriptional regulator YP_001789940.1 968198 D 395495 CDS YP_001789941.1 171057592 6162219 complement(969100..969369) 1 NC_010524.1 hypothetical protein 969369 6162219 Lcho_0904 Leptothrix cholodnii SP-6 hypothetical protein YP_001789941.1 969100 R 395495 CDS YP_001789942.1 171057593 6162220 complement(969501..969854) 1 NC_010524.1 KEGG: mpt:Mpe_A3028 hypothetical protein; hypothetical protein 969854 6162220 Lcho_0905 Leptothrix cholodnii SP-6 hypothetical protein YP_001789942.1 969501 R 395495 CDS YP_001789943.1 171057594 6162101 970066..971274 1 NC_010524.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 971274 6162101 Lcho_0906 Leptothrix cholodnii SP-6 acetylornithine aminotransferase YP_001789943.1 970066 D 395495 CDS YP_001789944.1 171057595 6162102 971271..972233 1 NC_010524.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 972233 6162102 Lcho_0907 Leptothrix cholodnii SP-6 ornithine carbamoyltransferase YP_001789944.1 971271 D 395495 CDS YP_001789945.1 171057596 6162103 972272..972931 1 NC_010524.1 KEGG: mpt:Mpe_A0404 hypothetical protein; hypothetical protein 972931 6162103 Lcho_0908 Leptothrix cholodnii SP-6 hypothetical protein YP_001789945.1 972272 D 395495 CDS YP_001789946.1 171057597 6162104 complement(972967..973881) 1 NC_010524.1 PFAM: MltA-interacting MipA family protein; KEGG: mpt:Mpe_A1330 putative outer membrane protein; MltA-interacting MipA family protein 973881 6162104 Lcho_0909 Leptothrix cholodnii SP-6 MltA-interacting MipA family protein YP_001789946.1 972967 R 395495 CDS YP_001789947.1 171057598 6162105 974055..974798 1 NC_010524.1 PFAM: metallophosphoesterase; KEGG: mpt:Mpe_A3031 putative serine/threonine phosphatase; metallophosphoesterase 974798 6162105 Lcho_0910 Leptothrix cholodnii SP-6 metallophosphoesterase YP_001789947.1 974055 D 395495 CDS YP_001789948.1 171057599 6162106 974810..976249 1 NC_010524.1 PFAM: UspA domain protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mpt:Mpe_A3032 putative serine/threonine kinase; serine/threonine protein kinase 976249 6162106 Lcho_0911 Leptothrix cholodnii SP-6 serine/threonine protein kinase YP_001789948.1 974810 D 395495 CDS YP_001789949.1 171057600 6160244 complement(976324..977664) 1 NC_010524.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 977664 6160244 Lcho_0912 Leptothrix cholodnii SP-6 argininosuccinate synthase YP_001789949.1 976324 R 395495 CDS YP_001789950.1 171057601 6160245 977831..978145 1 NC_010524.1 PFAM: protein of unknown function DUF1255; KEGG: eba:ebD86 hypothetical protein; hypothetical protein 978145 6160245 Lcho_0913 Leptothrix cholodnii SP-6 hypothetical protein YP_001789950.1 977831 D 395495 CDS YP_001789951.1 171057602 6160246 978292..978792 1 NC_010524.1 KEGG: cvi:CV_2214 hypothetical protein; hypothetical protein 978792 6160246 Lcho_0914 Leptothrix cholodnii SP-6 hypothetical protein YP_001789951.1 978292 D 395495 CDS YP_001789952.1 171057603 6160247 978789..981257 1 NC_010524.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: cvi:CV_2213 probable sensor histidine kinase/response regulator; Hpt sensor hybrid histidine kinase 981257 6160247 Lcho_0915 Leptothrix cholodnii SP-6 Hpt sensor hybrid histidine kinase YP_001789952.1 978789 D 395495 CDS YP_001789953.1 171057604 6160248 complement(981246..981668) 1 NC_010524.1 KEGG: mpt:Mpe_A3554 hypothetical protein; hypothetical protein 981668 6160248 Lcho_0916 Leptothrix cholodnii SP-6 hypothetical protein YP_001789953.1 981246 R 395495 CDS YP_001789954.1 171057605 6160249 complement(981754..983124) 1 NC_010524.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 983124 6160249 Lcho_0917 Leptothrix cholodnii SP-6 DNA repair protein RadA YP_001789954.1 981754 R 395495 CDS YP_001789955.1 171057606 6159899 983204..983833 1 NC_010524.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mpt:Mpe_A2512 LysE family efflux protein; lysine exporter protein LysE/YggA 983833 6159899 Lcho_0918 Leptothrix cholodnii SP-6 lysine exporter protein LysE/YggA YP_001789955.1 983204 D 395495 CDS YP_001789956.1 171057607 6159900 complement(983855..984265) 1 NC_010524.1 PFAM: Class I peptide chain release factor; KEGG: ajs:Ajs_1612 class I peptide chain release factor; class I peptide chain release factor 984265 6159900 Lcho_0919 Leptothrix cholodnii SP-6 class I peptide chain release factor YP_001789956.1 983855 R 395495 CDS YP_001789957.1 171057608 6159901 complement(984281..985414) 1 NC_010524.1 KEGG: ajs:Ajs_0176 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 985414 6159901 Lcho_0920 Leptothrix cholodnii SP-6 alanine racemase YP_001789957.1 984281 R 395495 CDS YP_001789958.1 171057609 6159902 985646..986899 1 NC_010524.1 PFAM: major facilitator superfamily MFS_1; KEGG: mpt:Mpe_A3563 hypothetical protein; lysophospholipid transporter LplT 986899 6159902 Lcho_0921 Leptothrix cholodnii SP-6 lysophospholipid transporter LplT YP_001789958.1 985646 D 395495 CDS YP_001789959.1 171057610 6159903 986912..987841 1 NC_010524.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mpt:Mpe_A3564 putative transmembrane protein; hypothetical protein 987841 6159903 Lcho_0922 Leptothrix cholodnii SP-6 hypothetical protein YP_001789959.1 986912 D 395495 CDS YP_001789960.1 171057611 6159904 complement(987860..988699) 1 NC_010524.1 PFAM: response regulator receiver; KEGG: mpt:Mpe_A3686 response regulator; response regulator receiver protein 988699 6159904 Lcho_0923 Leptothrix cholodnii SP-6 response regulator receiver protein YP_001789960.1 987860 R 395495 CDS YP_001789961.1 171057612 6160046 988960..990156 1 NC_010524.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 990156 6160046 Lcho_0924 Leptothrix cholodnii SP-6 aromatic amino acid aminotransferase YP_001789961.1 988960 D 395495 CDS YP_001789962.1 171057613 6160047 complement(990200..991171) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_0158 transcriptional regulator, LysR family; LysR family transcriptional regulator 991171 6160047 Lcho_0925 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001789962.1 990200 R 395495 CDS YP_001789963.1 171057614 6160048 991293..991526 1 NC_010524.1 hypothetical protein 991526 6160048 Lcho_0926 Leptothrix cholodnii SP-6 hypothetical protein YP_001789963.1 991293 D 395495 CDS YP_001789964.1 171057615 6160049 991568..991822 1 NC_010524.1 hypothetical protein 991822 6160049 Lcho_0927 Leptothrix cholodnii SP-6 hypothetical protein YP_001789964.1 991568 D 395495 CDS YP_001789965.1 171057616 6160050 complement(991825..993309) 1 NC_010524.1 PFAM: Aldehyde Dehydrogenase_; KEGG: sil:SPO0097 aldehyde dehydrogenase family protein; aldehyde dehydrogenase 993309 6160050 Lcho_0928 Leptothrix cholodnii SP-6 aldehyde dehydrogenase YP_001789965.1 991825 R 395495 CDS YP_001789966.1 171057617 6160051 complement(993457..993879) 1 NC_010524.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 993879 mscL 6160051 mscL Leptothrix cholodnii SP-6 large-conductance mechanosensitive channel YP_001789966.1 993457 R 395495 CDS YP_001789967.1 171057618 6159775 994108..994704 1 NC_010524.1 KEGG: ajs:Ajs_0789 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit 994704 6159775 Lcho_0930 Leptothrix cholodnii SP-6 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_001789967.1 994108 D 395495 CDS YP_001789968.1 171057619 6159776 994723..996126 1 NC_010524.1 PFAM: Cytochrome b/b6 domain; KEGG: mpt:Mpe_A0850 cytochrome b; cytochrome b/b6 domain-containing protein 996126 6159776 Lcho_0931 Leptothrix cholodnii SP-6 cytochrome b/b6 domain-containing protein YP_001789968.1 994723 D 395495 CDS YP_001789969.1 171057620 6159777 996152..996934 1 NC_010524.1 PFAM: cytochrome c1; KEGG: mpt:Mpe_A0851 cytochrome c1 precursor; cytochrome c1 996934 6159777 Lcho_0932 Leptothrix cholodnii SP-6 cytochrome c1 YP_001789969.1 996152 D 395495 CDS YP_001789970.1 171057621 6159778 997048..997662 1 NC_010524.1 PFAM: Glutathione S-transferase domain; KEGG: mpt:Mpe_A0852 putative transcription modulator protein; glutathione S-transferase domain-containing protein 997662 6159778 Lcho_0933 Leptothrix cholodnii SP-6 glutathione S-transferase domain-containing protein YP_001789970.1 997048 D 395495 CDS YP_001789971.1 171057622 6159779 997676..998233 1 NC_010524.1 PFAM: Stringent starvation protein B; KEGG: mpt:Mpe_A0853 ClpXP protease specificity-enhancing factor; ClpXP protease specificity-enhancing factor 998233 6159779 Lcho_0934 Leptothrix cholodnii SP-6 ClpXP protease specificity-enhancing factor YP_001789971.1 997676 D 395495 CDS YP_001789972.1 171057623 6159738 998522..999187 1 NC_010524.1 PFAM: Transaldolase; KEGG: ade:Adeh_4063 putative translaldolase; transaldolase 999187 6159738 Lcho_0935 Leptothrix cholodnii SP-6 transaldolase YP_001789972.1 998522 D 395495 CDS YP_001789973.1 171057624 6159739 999192..999647 1 NC_010524.1 PFAM: protein of unknown function DUF454; KEGG: rfr:Rfer_2579 protein of unknown function DUF454; hypothetical protein 999647 6159739 Lcho_0936 Leptothrix cholodnii SP-6 hypothetical protein YP_001789973.1 999192 D 395495 CDS YP_001789974.1 171057625 6159740 complement(999590..1000900) 1 NC_010524.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: mpt:Mpe_A1234 DNA-directed DNA polymerase; DNA-directed DNA polymerase 1000900 6159740 Lcho_0937 Leptothrix cholodnii SP-6 DNA-directed DNA polymerase YP_001789974.1 999590 R 395495 CDS YP_001789975.1 171057626 6159741 1001043..1002299 1 NC_010524.1 KEGG: rfr:Rfer_1228 hypothetical protein; hypothetical protein 1002299 6159741 Lcho_0938 Leptothrix cholodnii SP-6 hypothetical protein YP_001789975.1 1001043 D 395495 CDS YP_001789976.1 171057627 6159742 1002462..1003925 1 NC_010524.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: mpt:Mpe_A3769 TldD protein; peptidase U62 modulator of DNA gyrase 1003925 6159742 Lcho_0939 Leptothrix cholodnii SP-6 peptidase U62 modulator of DNA gyrase YP_001789976.1 1002462 D 395495 CDS YP_001789977.1 171057628 6160221 1004178..1005299 1 NC_010524.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1005299 6160221 Lcho_0940 Leptothrix cholodnii SP-6 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001789977.1 1004178 D 395495 CDS YP_001789978.1 171057629 6160222 1005355..1005657 1 NC_010524.1 KEGG: ajs:Ajs_3643 hypothetical protein; hypothetical protein 1005657 6160222 Lcho_0941 Leptothrix cholodnii SP-6 hypothetical protein YP_001789978.1 1005355 D 395495 CDS YP_001789979.1 171057630 6160223 complement(1005694..1006269) 1 NC_010524.1 TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: mpt:Mpe_A3773 hypothetical protein; ATP--cobalamin adenosyltransferase 1006269 6160223 Lcho_0942 Leptothrix cholodnii SP-6 ATP--cobalamin adenosyltransferase YP_001789979.1 1005694 R 395495 CDS YP_001789980.1 171057631 6160224 1006317..1007081 1 NC_010524.1 TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; KEGG: mpt:Mpe_A3702 SecA-related metal-binding protein; yecA family protein 1007081 6160224 Lcho_0943 Leptothrix cholodnii SP-6 yecA family protein YP_001789980.1 1006317 D 395495 CDS YP_001789981.1 171057632 6160225 1007194..1007616 1 NC_010524.1 PFAM: UspA domain protein; KEGG: mpt:Mpe_A3700 hypothetical protein; UspA domain-containing protein 1007616 6160225 Lcho_0944 Leptothrix cholodnii SP-6 UspA domain-containing protein YP_001789981.1 1007194 D 395495 CDS YP_001789982.1 171057633 6160226 complement(1007728..1007988) 1 NC_010524.1 hypothetical protein 1007988 6160226 Lcho_0945 Leptothrix cholodnii SP-6 hypothetical protein YP_001789982.1 1007728 R 395495 CDS YP_001789983.1 171057634 6160160 complement(1008066..1009643) 1 NC_010524.1 KEGG: mpt:Mpe_A3516 phosphodiesterase/alkaline phosphatase D; alkaline phosphatase 1009643 6160160 Lcho_0946 Leptothrix cholodnii SP-6 alkaline phosphatase YP_001789983.1 1008066 R 395495 CDS YP_001789984.1 171057635 6160161 complement(1009654..1010589) 1 NC_010524.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 1010589 6160161 Lcho_0947 Leptothrix cholodnii SP-6 chromosome replication initiation inhibitor protein YP_001789984.1 1009654 R 395495 CDS YP_001789985.1 171057636 6160162 1010746..1012053 1 NC_010524.1 PFAM: FAD dependent oxidoreductase; KEGG: mpt:Mpe_A3520 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase 1012053 6160162 Lcho_0948 Leptothrix cholodnii SP-6 D-amino-acid dehydrogenase YP_001789985.1 1010746 D 395495 CDS YP_001789986.1 171057637 6160163 complement(1012929..1013753) 1 NC_010524.1 hypothetical protein 1013753 6160163 Lcho_0949 Leptothrix cholodnii SP-6 hypothetical protein YP_001789986.1 1012929 R 395495 CDS YP_001789987.1 171057638 6160164 1014244..1014867 1 NC_010524.1 PFAM: Resolvase domain; KEGG: atc:AGR_L_1981 hypothetical protein; resolvase domain-containing protein 1014867 6160164 Lcho_0950 Leptothrix cholodnii SP-6 resolvase domain-containing protein YP_001789987.1 1014244 D 395495 CDS YP_001789988.1 171057639 6160165 1014935..1015258 1 NC_010524.1 hypothetical protein 1015258 6160165 Lcho_0951 Leptothrix cholodnii SP-6 hypothetical protein YP_001789988.1 1014935 D 395495 CDS YP_001789989.1 171057640 6160123 1015263..1015472 1 NC_010524.1 hypothetical protein 1015472 6160123 Lcho_0952 Leptothrix cholodnii SP-6 hypothetical protein YP_001789989.1 1015263 D 395495 CDS YP_001789990.1 171057641 6160124 1015474..1016364 1 NC_010524.1 hypothetical protein 1016364 6160124 Lcho_0953 Leptothrix cholodnii SP-6 hypothetical protein YP_001789990.1 1015474 D 395495 CDS YP_001789991.1 171057642 6160125 complement(1017147..1018313) 1 NC_010524.1 PFAM: integrase family protein; KEGG: pen:PSEEN1782 integrase; integrase family protein 1018313 6160125 Lcho_0954 Leptothrix cholodnii SP-6 integrase family protein YP_001789991.1 1017147 R 395495 CDS YP_001789992.1 171057643 6160126 complement(1018439..1019521) 1 NC_010524.1 PFAM: transposase IS4 family protein; KEGG: eba:ebA3243 transposase, IS5 family; transposase IS4 family protein 1019521 6160126 Lcho_0955 Leptothrix cholodnii SP-6 transposase IS4 family protein YP_001789992.1 1018439 R 395495 CDS YP_001789993.1 171057644 6160128 complement(1020556..1021224) 1 NC_010524.1 TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pol:Bpro_1798 phosphoglycolate phosphatase; phosphoglycolate phosphatase 1021224 6160128 Lcho_0956 Leptothrix cholodnii SP-6 phosphoglycolate phosphatase YP_001789993.1 1020556 R 395495 CDS YP_001789994.1 171057645 6160502 complement(1021221..1021928) 1 NC_010524.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 1021928 6160502 Lcho_0957 Leptothrix cholodnii SP-6 3-demethylubiquinone-9 3-methyltransferase YP_001789994.1 1021221 R 395495 CDS YP_001789995.1 171057646 6160503 complement(1022010..1022741) 1 NC_010524.1 PFAM: OmpA/MotB domain protein; KEGG: mpt:Mpe_A2237 putative signal peptide protein; OmpA/MotB domain-containing protein 1022741 6160503 Lcho_0958 Leptothrix cholodnii SP-6 OmpA/MotB domain-containing protein YP_001789995.1 1022010 R 395495 CDS YP_001789996.1 171057647 6160504 1023035..1025692 1 NC_010524.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 1025692 6160504 Lcho_0959 Leptothrix cholodnii SP-6 DNA gyrase subunit A YP_001789996.1 1023035 D 395495 CDS YP_001789997.1 171057648 6160505 1025692..1026270 1 NC_010524.1 KEGG: rfr:Rfer_3193 hypothetical protein; hypothetical protein 1026270 6160505 Lcho_0960 Leptothrix cholodnii SP-6 hypothetical protein YP_001789997.1 1025692 D 395495 CDS YP_001789998.1 171057649 6160506 1026373..1027497 1 NC_010524.1 TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: mpt:Mpe_A2241 P-protein (bifunctional includes: chorismate mutase and prephenate dehydratase); chorismate mutase 1027497 6160506 Lcho_0961 Leptothrix cholodnii SP-6 chorismate mutase YP_001789998.1 1026373 D 395495 CDS YP_001789999.1 171057650 6161471 1027526..1028407 1 NC_010524.1 PFAM: Prephenate dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mpt:Mpe_A2242 prephenate dehydrogenase; prephenate dehydrogenase 1028407 6161471 Lcho_0962 Leptothrix cholodnii SP-6 prephenate dehydrogenase YP_001789999.1 1027526 D 395495 CDS YP_001790000.1 171057651 6161472 1028428..1030527 1 NC_010524.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; catalyzes CMP phosphorylation; bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase 1030527 6161472 Lcho_0963 Leptothrix cholodnii SP-6 bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase YP_001790000.1 1028428 D 395495 CDS YP_001790001.1 171057652 6161473 1030689..1032377 1 NC_010524.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1032377 rpsA 6161473 rpsA Leptothrix cholodnii SP-6 30S ribosomal protein S1 YP_001790001.1 1030689 D 395495 CDS YP_001790002.1 171057653 6161474 1032397..1032735 1 NC_010524.1 TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: mpt:Mpe_A2245 putative integration host factor beta-subunit (IHF-beta) protein; integration host factor subunit beta 1032735 6161474 Lcho_0965 Leptothrix cholodnii SP-6 integration host factor subunit beta YP_001790002.1 1032397 D 395495 CDS YP_001790003.1 171057654 6161475 1032881..1033201 1 NC_010524.1 KEGG: mpt:Mpe_A2246 hypothetical protein; hypothetical protein 1033201 6161475 Lcho_0966 Leptothrix cholodnii SP-6 hypothetical protein YP_001790003.1 1032881 D 395495 CDS YP_001790004.1 171057655 6161476 1033191..1034345 1 NC_010524.1 KEGG: mpt:Mpe_A2247 hypothetical protein; hypothetical protein 1034345 6161476 Lcho_0967 Leptothrix cholodnii SP-6 hypothetical protein YP_001790004.1 1033191 D 395495 CDS YP_001790005.1 171057656 6163032 complement(1034379..1035308) 1 NC_010524.1 TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: dar:Daro_3928 lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase I 1035308 6163032 Lcho_0968 Leptothrix cholodnii SP-6 lipopolysaccharide heptosyltransferase I YP_001790005.1 1034379 R 395495 CDS YP_001790006.1 171057657 6163033 complement(1035355..1036008) 1 NC_010524.1 KEGG: tbd:Tbd_0736 hypothetical protein; hypothetical protein 1036008 6163033 Lcho_0969 Leptothrix cholodnii SP-6 hypothetical protein YP_001790006.1 1035355 R 395495 CDS YP_001790007.1 171057658 6163034 complement(1036060..1037112) 1 NC_010524.1 KEGG: mca:MCA1515 hypothetical protein; hypothetical protein 1037112 6163034 Lcho_0970 Leptothrix cholodnii SP-6 hypothetical protein YP_001790007.1 1036060 R 395495 CDS YP_001790008.1 171057659 6163035 complement(1037109..1038101) 1 NC_010524.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: gur:Gura_3058 methyltransferase type 12; type 11 methyltransferase 1038101 6163035 Lcho_0971 Leptothrix cholodnii SP-6 type 11 methyltransferase YP_001790008.1 1037109 R 395495 CDS YP_001790009.1 171057660 6163036 1038303..1038974 1 NC_010524.1 KEGG: ret:RHE_CH02994 hypothetical protein; hypothetical protein 1038974 6163036 Lcho_0972 Leptothrix cholodnii SP-6 hypothetical protein YP_001790009.1 1038303 D 395495 CDS YP_001790010.1 171057661 6163037 1039011..1039853 1 NC_010524.1 hypothetical protein 1039853 6163037 Lcho_0973 Leptothrix cholodnii SP-6 hypothetical protein YP_001790010.1 1039011 D 395495 CDS YP_001790011.1 171057662 6163264 complement(1039907..1040722) 1 NC_010524.1 KEGG: gdi:GDI2996 hypothetical protein; hypothetical protein 1040722 6163264 Lcho_0974 Leptothrix cholodnii SP-6 hypothetical protein YP_001790011.1 1039907 R 395495 CDS YP_001790012.1 171057663 6163265 complement(1040731..1041801) 1 NC_010524.1 PFAM: glycosyl transferase group 1; KEGG: fjo:Fjoh_2517 glycosyl transferase, group 1; group 1 glycosyl transferase 1041801 6163265 Lcho_0975 Leptothrix cholodnii SP-6 group 1 glycosyl transferase YP_001790012.1 1040731 R 395495 CDS YP_001790013.1 171057664 6163266 complement(1041809..1042756) 1 NC_010524.1 PFAM: glycosyl transferase family 9; KEGG: bpt:Bpet3111 ADP-heptose-LPS heptosyltransferase II; glycosyl transferase family protein 1042756 6163266 Lcho_0976 Leptothrix cholodnii SP-6 glycosyl transferase family protein YP_001790013.1 1041809 R 395495 CDS YP_001790014.1 171057665 6163267 1043041..1043370 1 NC_010524.1 KEGG: mpt:Mpe_A2249 hypothetical protein; hypothetical protein 1043370 6163267 Lcho_0977 Leptothrix cholodnii SP-6 hypothetical protein YP_001790014.1 1043041 D 395495 CDS YP_001790015.1 171057666 6163268 complement(1043407..1044675) 1 NC_010524.1 PFAM: Patatin; KEGG: mpt:Mpe_A2250 hypothetical protein; patatin 1044675 6163268 Lcho_0978 Leptothrix cholodnii SP-6 patatin YP_001790015.1 1043407 R 395495 CDS YP_001790016.1 171057667 6161993 complement(1045405..1048971) 1 NC_010524.1 KEGG: mpt:Mpe_A2252 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 1048971 6161993 Lcho_0980 Leptothrix cholodnii SP-6 DNA polymerase III subunit alpha YP_001790016.1 1045405 R 395495 CDS YP_001790017.1 171057668 6161994 1049032..1049775 1 NC_010524.1 PFAM: Rhodanese domain protein; KEGG: aav:Aave_3026 rhodanese domain protein; rhodanese domain-containing protein 1049775 6161994 Lcho_0981 Leptothrix cholodnii SP-6 rhodanese domain-containing protein YP_001790017.1 1049032 D 395495 CDS YP_001790018.1 171057669 6161995 1049907..1050809 1 NC_010524.1 TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_3803 transcriptional regulator; LysR family transcriptional regulator 1050809 6161995 Lcho_0982 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001790018.1 1049907 D 395495 CDS YP_001790019.1 171057670 6161996 complement(1050811..1051773) 1 NC_010524.1 PFAM: GTPase EngC; KEGG: mpt:Mpe_A2914 putative ATP/GTP-binding protein; GTPase EngC 1051773 6161996 Lcho_0983 Leptothrix cholodnii SP-6 GTPase EngC YP_001790019.1 1050811 R 395495 CDS YP_001790020.1 171057671 6161997 complement(1051781..1053064) 1 NC_010524.1 PFAM: peptidase M48 Ste24p; KEGG: mpt:Mpe_A2912 STE24 endopeptidase; Ste24 endopeptidase 1053064 6161997 Lcho_0984 Leptothrix cholodnii SP-6 Ste24 endopeptidase YP_001790020.1 1051781 R 395495 CDS YP_001790021.1 171057672 6161998 1053136..1053699 1 NC_010524.1 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 1053699 6161998 Lcho_0985 Leptothrix cholodnii SP-6 oligoribonuclease YP_001790021.1 1053136 D 395495 CDS YP_001790022.1 171057673 6162177 complement(1053716..1054183) 1 NC_010524.1 PFAM: regulatory protein MarR; KEGG: rpe:RPE_3794 transcriptional regulator, MarR family; MarR family transcriptional regulator 1054183 6162177 Lcho_0986 Leptothrix cholodnii SP-6 MarR family transcriptional regulator YP_001790022.1 1053716 R 395495 CDS YP_001790023.1 171057674 6162178 complement(1054189..1055982) 1 NC_010524.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: dac:Daci_2761 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 1055982 6162178 Lcho_0987 Leptothrix cholodnii SP-6 acyl-CoA dehydrogenase domain-containing protein YP_001790023.1 1054189 R 395495 CDS YP_001790024.1 171057675 6162179 complement(1056079..1056822) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_0803 ABC transporter related; ABC transporter-like protein 1056822 6162179 Lcho_0988 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001790024.1 1056079 R 395495 CDS YP_001790025.1 171057676 6162180 complement(1056822..1058603) 1 NC_010524.1 PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_0802 ABC transporter related; ABC transporter-like protein 1058603 6162180 Lcho_0989 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001790025.1 1056822 R 395495 CDS YP_001790026.1 171057677 6162181 complement(1058605..1059642) 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: pna:Pnap_0801 inner-membrane translocator; inner-membrane translocator 1059642 6162181 Lcho_0990 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001790026.1 1058605 R 395495 CDS YP_001790027.1 171057678 6162182 complement(1059647..1060789) 1 NC_010524.1 PFAM: Extracellular ligand-binding receptor; KEGG: pna:Pnap_0800 extracellular ligand-binding receptor; extracellular ligand-binding receptor 1060789 6162182 Lcho_0991 Leptothrix cholodnii SP-6 extracellular ligand-binding receptor YP_001790027.1 1059647 R 395495 CDS YP_001790028.1 171057679 6162440 complement(1060930..1061694) 1 NC_010524.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rfr:Rfer_0271 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1061694 6162440 Lcho_0992 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001790028.1 1060930 R 395495 CDS YP_001790029.1 171057680 6162441 complement(1061706..1063586) 1 NC_010524.1 catalyzes the conversion of ferulic acid to feruloyl-CoA; feruloyl-CoA synthase 1063586 6162441 Lcho_0993 Leptothrix cholodnii SP-6 feruloyl-CoA synthase YP_001790029.1 1061706 R 395495 CDS YP_001790030.1 171057681 6162442 complement(1063583..1064404) 1 NC_010524.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1064404 6162442 Lcho_0994 Leptothrix cholodnii SP-6 enoyl-CoA hydratase YP_001790030.1 1063583 R 395495 CDS YP_001790031.1 171057682 6162443 1064574..1065437 1 NC_010524.1 PFAM: amidohydrolase 2; KEGG: rfr:Rfer_0275 amidohydrolase 2; amidohydrolase 2 1065437 6162443 Lcho_0995 Leptothrix cholodnii SP-6 amidohydrolase 2 YP_001790031.1 1064574 D 395495 CDS YP_001790032.1 171057683 6162444 1065631..1065942 1 NC_010524.1 PFAM: cytochrome c class I; KEGG: pol:Bpro_0336 cytochrome c, class I; cytochrome c class I 1065942 6162444 Lcho_0996 Leptothrix cholodnii SP-6 cytochrome c class I YP_001790032.1 1065631 D 395495 CDS YP_001790033.1 171057684 6162445 complement(1066104..1066877) 1 NC_010524.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: rfr:Rfer_0084 ferredoxin--NADP(+) reductase; oxidoreductase FAD/NAD(P)-binding subunit 1066877 6162445 Lcho_0997 Leptothrix cholodnii SP-6 oxidoreductase FAD/NAD(P)-binding subunit YP_001790033.1 1066104 R 395495 CDS YP_001790034.1 171057685 6163301 complement(1067076..1067708) 1 NC_010524.1 PFAM: Chemotaxis phosphatase CheZ; KEGG: mpt:Mpe_A2875 chemotaxis protein CheZ; chemotaxis phosphatase, CheZ 1067708 6163301 Lcho_0998 Leptothrix cholodnii SP-6 chemotaxis phosphatase, CheZ YP_001790034.1 1067076 R 395495 CDS YP_001790035.1 171057686 6163302 complement(1067728..1068126) 1 NC_010524.1 PFAM: response regulator receiver; KEGG: aav:Aave_4410 response regulator receiver protein; response regulator receiver protein 1068126 6163302 Lcho_0999 Leptothrix cholodnii SP-6 response regulator receiver protein YP_001790035.1 1067728 R 395495 CDS YP_001790036.1 171057687 6163303 complement(1068204..1069166) 1 NC_010524.1 PFAM: OmpA/MotB domain protein; KEGG: mpt:Mpe_A2873 chemotaxis signal transduction protein CheY; OmpA/MotB domain-containing protein 1069166 6163303 Lcho_1000 Leptothrix cholodnii SP-6 OmpA/MotB domain-containing protein YP_001790036.1 1068204 R 395495 CDS YP_001790037.1 171057688 6163304 complement(1069180..1070037) 1 NC_010524.1 KEGG: mpt:Mpe_A2872 chemotaxis signal transduction protein CheY; chemotaxis signal transduction protein CheY 1070037 6163304 Lcho_1001 Leptothrix cholodnii SP-6 chemotaxis signal transduction protein CheY YP_001790037.1 1069180 R 395495 CDS YP_001790038.1 171057689 6163305 complement(1070114..1070887) 1 NC_010524.1 KEGG: ajs:Ajs_0032 methyltransferase type 12; type 12 methyltransferase 1070887 6163305 Lcho_1002 Leptothrix cholodnii SP-6 type 12 methyltransferase YP_001790038.1 1070114 R 395495 CDS YP_001790039.1 171057690 6163306 complement(1071050..1072321) 1 NC_010524.1 KEGG: mpt:Mpe_A2795 hypothetical protein; putative metal dependent phosphohydrolase 1072321 6163306 Lcho_1003 Leptothrix cholodnii SP-6 putative metal dependent phosphohydrolase YP_001790039.1 1071050 R 395495 CDS YP_001790040.1 171057691 6160166 complement(1072487..1073023) 1 NC_010524.1 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 1073023 6160166 Lcho_1004 Leptothrix cholodnii SP-6 transcriptional activator FlhC YP_001790040.1 1072487 R 395495 CDS YP_001790041.1 171057692 6160167 complement(1073085..1073408) 1 NC_010524.1 PFAM: flagellar transcriptional activator; KEGG: mpt:Mpe_A2869 transcriptional regulator; flagellar transcriptional activator 1073408 6160167 Lcho_1005 Leptothrix cholodnii SP-6 flagellar transcriptional activator YP_001790041.1 1073085 R 395495 CDS YP_001790042.1 171057693 6160168 complement(1073626..1074951) 1 NC_010524.1 PFAM: Tetratricopeptide TPR_4; KEGG: rca:Rcas_1625 TPR repeat-containing protein; hypothetical protein 1074951 6160168 Lcho_1006 Leptothrix cholodnii SP-6 hypothetical protein YP_001790042.1 1073626 R 395495 CDS YP_001790043.1 171057694 6160169 complement(1075099..1076601) 1 NC_010524.1 KEGG: cph:Cpha266_1838 hypothetical protein; hypothetical protein 1076601 6160169 Lcho_1007 Leptothrix cholodnii SP-6 hypothetical protein YP_001790043.1 1075099 R 395495 CDS YP_001790044.1 171057695 6160170 complement(1076638..1078656) 1 NC_010524.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: swi:Swit_2139 TPR repeat-containing protein; hypothetical protein 1078656 6160170 Lcho_1008 Leptothrix cholodnii SP-6 hypothetical protein YP_001790044.1 1076638 R 395495 CDS YP_001790045.1 171057696 6160171 1079038..1079898 1 NC_010524.1 PFAM: flagellin domain protein; KEGG: ajs:Ajs_3813 flagellin domain protein; flagellin domain-containing protein 1079898 6160171 Lcho_1009 Leptothrix cholodnii SP-6 flagellin domain-containing protein YP_001790045.1 1079038 D 395495 CDS YP_001790046.1 171057697 6160135 1080213..1081076 1 NC_010524.1 PFAM: flagellin domain protein; KEGG: ajs:Ajs_3813 flagellin domain protein; flagellin domain-containing protein 1081076 6160135 Lcho_1010 Leptothrix cholodnii SP-6 flagellin domain-containing protein YP_001790046.1 1080213 D 395495 CDS YP_001790047.1 171057698 6160136 1081216..1082655 1 NC_010524.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: mpt:Mpe_A2865 flagellar capping protein; flagellar hook-associated 2 domain-containing protein 1082655 6160136 Lcho_1011 Leptothrix cholodnii SP-6 flagellar hook-associated 2 domain-containing protein YP_001790047.1 1081216 D 395495 CDS YP_001790048.1 171057699 6160137 1082799..1083218 1 NC_010524.1 PFAM: flagellar protein FliS; KEGG: mpt:Mpe_A2864 flagellar protein; flagellar protein FliS 1083218 6160137 Lcho_1012 Leptothrix cholodnii SP-6 flagellar protein FliS YP_001790048.1 1082799 D 395495 CDS YP_001790049.1 171057700 6160138 1083276..1083620 1 NC_010524.1 KEGG: mpt:Mpe_A2863 flagellar chaperone; flagellar chaperone 1083620 6160138 Lcho_1013 Leptothrix cholodnii SP-6 flagellar chaperone YP_001790049.1 1083276 D 395495 CDS YP_001790050.1 171057701 6160139 1083668..1084423 1 NC_010524.1 PFAM: type IV pilus assembly PilZ; KEGG: mpt:Mpe_A2862 glycosyltransferase-like protein; type IV pilus assembly PilZ 1084423 6160139 Lcho_1014 Leptothrix cholodnii SP-6 type IV pilus assembly PilZ YP_001790050.1 1083668 D 395495 CDS YP_001790051.1 171057702 6160140 complement(1084460..1084828) 1 NC_010524.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: mpt:Mpe_A0564 flagellar hook-basal body protein; flagellar hook-basal body complex subunit FliE 1084828 6160140 Lcho_1015 Leptothrix cholodnii SP-6 flagellar hook-basal body complex subunit FliE YP_001790051.1 1084460 R 395495 CDS YP_001790052.1 171057703 6159861 1085026..1086756 1 NC_010524.1 TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: mpt:Mpe_A0565 flagellar biosynthesis lipoprotein; flagellar M-ring protein FliF 1086756 6159861 Lcho_1016 Leptothrix cholodnii SP-6 flagellar M-ring protein FliF YP_001790052.1 1085026 D 395495 CDS YP_001790053.1 171057704 6159862 1086778..1087779 1 NC_010524.1 PFAM: flagellar motor switch protein FliG; KEGG: mpt:Mpe_A0566 flagellar motor switch protein; flagellar motor switch protein FliG 1087779 6159862 Lcho_1017 Leptothrix cholodnii SP-6 flagellar motor switch protein FliG YP_001790053.1 1086778 D 395495 CDS YP_001790054.1 171057705 6159863 1087763..1088548 1 NC_010524.1 PFAM: flagellar assembly protein FliH; KEGG: mpt:Mpe_A0567 flagellar biosynthesis protein; flagellar assembly protein FliH 1088548 6159863 Lcho_1018 Leptothrix cholodnii SP-6 flagellar assembly protein FliH YP_001790054.1 1087763 D 395495 CDS YP_001790055.1 171057706 6159864 1088545..1089945 1 NC_010524.1 KEGG: mpt:Mpe_A0568 flagellar biosynthesis ATPase; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase; flagellar protein export ATPase FliI 1089945 6159864 Lcho_1019 Leptothrix cholodnii SP-6 flagellar protein export ATPase FliI YP_001790055.1 1088545 D 395495 CDS YP_001790056.1 171057707 6159865 1089984..1090463 1 NC_010524.1 TIGRFAM: flagellar export protein FliJ; KEGG: mpt:Mpe_A0569 flagellar biosynthesis chaperone; flagellar export protein FliJ 1090463 6159865 Lcho_1020 Leptothrix cholodnii SP-6 flagellar export protein FliJ YP_001790056.1 1089984 D 395495 CDS YP_001790057.1 171057708 6159866 1090482..1091954 1 NC_010524.1 PFAM: flagellar hook-length control protein; KEGG: mpt:Mpe_A0570 flagellar hook-length control protein; flagellar hook-length control protein 1091954 6159866 Lcho_1021 Leptothrix cholodnii SP-6 flagellar hook-length control protein YP_001790057.1 1090482 D 395495 CDS YP_001790058.1 171057709 6159705 1092131..1092733 1 NC_010524.1 PFAM: flagellar basal body-associated protein FliL; KEGG: mpt:Mpe_A0571 flagellar basal body-associated protein; flagellar basal body-associated protein FliL 1092733 6159705 Lcho_1022 Leptothrix cholodnii SP-6 flagellar basal body-associated protein FliL YP_001790058.1 1092131 D 395495 CDS YP_001790059.1 171057710 6159706 1092759..1093763 1 NC_010524.1 PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: mpt:Mpe_A0572 flagellar motor switch protein; flagellar motor switch protein FliM 1093763 6159706 Lcho_1023 Leptothrix cholodnii SP-6 flagellar motor switch protein FliM YP_001790059.1 1092759 D 395495 CDS YP_001790060.1 171057711 6159707 1093753..1094214 1 NC_010524.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: mpt:Mpe_A0573 flagellar motor switch protein; flagellar motor switch protein FliN 1094214 6159707 Lcho_1024 Leptothrix cholodnii SP-6 flagellar motor switch protein FliN YP_001790060.1 1093753 D 395495 CDS YP_001790061.1 171057712 6159708 1094224..1094646 1 NC_010524.1 PFAM: flagellar biosynthesis protein FliO; KEGG: mpt:Mpe_A0574 flagellar biogenesis protein; flagellar biosynthesis protein FliO 1094646 6159708 Lcho_1025 Leptothrix cholodnii SP-6 flagellar biosynthesis protein FliO YP_001790061.1 1094224 D 395495 CDS YP_001790062.1 171057713 6159709 1094649..1095437 1 NC_010524.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 1095437 fliP 6159709 fliP Leptothrix cholodnii SP-6 flagellar biosynthesis protein FliP YP_001790062.1 1094649 D 395495 CDS YP_001790063.1 171057714 6159710 1095472..1095741 1 NC_010524.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: mpt:Mpe_A0576 flagellar biosynthesis protein; flagellar biosynthetic protein FliQ 1095741 6159710 Lcho_1027 Leptothrix cholodnii SP-6 flagellar biosynthetic protein FliQ YP_001790063.1 1095472 D 395495 CDS YP_001790064.1 171057715 6159975 1095754..1096515 1 NC_010524.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: mpt:Mpe_A0577 flagellar biosynthesis protein; flagellar biosynthetic protein FliR 1096515 6159975 Lcho_1028 Leptothrix cholodnii SP-6 flagellar biosynthetic protein FliR YP_001790064.1 1095754 D 395495 CDS YP_001790065.1 171057716 6159976 1096540..1097103 1 NC_010524.1 KEGG: mpt:Mpe_A0322 putative transmembrane protein; putative transmembrane protein 1097103 6159976 Lcho_1029 Leptothrix cholodnii SP-6 putative transmembrane protein YP_001790065.1 1096540 D 395495 CDS YP_001790066.1 171057717 6159977 1097145..1097600 1 NC_010524.1 PFAM: PTS system fructose subfamily IIA component; KEGG: mpt:Mpe_A0323 PTS system, unknown pentitol phosphotransferase enzyme II component, putative; PTS system fructose subfamily transporter subunit IIA 1097600 6159977 Lcho_1030 Leptothrix cholodnii SP-6 PTS system fructose subfamily transporter subunit IIA YP_001790066.1 1097145 D 395495 CDS YP_001790067.1 171057718 6159978 1097569..1097838 1 NC_010524.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: aav:Aave_0353 phosphotransferase system, phosphocarrier protein HPr; phosphotransferase system, phosphocarrier protein HPr 1097838 6159978 Lcho_1031 Leptothrix cholodnii SP-6 phosphotransferase system, phosphocarrier protein HPr YP_001790067.1 1097569 D 395495 CDS YP_001790068.1 171057719 6159979 complement(1097891..1098751) 1 NC_010524.1 KEGG: mpt:Mpe_A0325 hypothetical protein; hypothetical protein 1098751 6159979 Lcho_1032 Leptothrix cholodnii SP-6 hypothetical protein YP_001790068.1 1097891 R 395495 CDS YP_001790069.1 171057720 6159980 1098901..1100712 1 NC_010524.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: mpt:Mpe_A0326 putative phosphoenolpyruvate-protein phosphotransferase transmembrane; phosphoenolpyruvate-protein phosphotransferase 1100712 6159980 Lcho_1033 Leptothrix cholodnii SP-6 phosphoenolpyruvate-protein phosphotransferase YP_001790069.1 1098901 D 395495 CDS YP_001790070.1 171057721 6160697 1106795..1106956 1 NC_010524.1 hypothetical protein 1106956 6160697 Lcho_1034 Leptothrix cholodnii SP-6 hypothetical protein YP_001790070.1 1106795 D 395495 CDS YP_001790071.1 171057722 6160698 1107014..1107505 1 NC_010524.1 PFAM: transposase IS3/IS911 family protein; KEGG: aeh:Mlg_2336 hypothetical protein; transposase IS3/IS911 family protein 1107505 6160698 Lcho_1035 Leptothrix cholodnii SP-6 transposase IS3/IS911 family protein YP_001790071.1 1107014 D 395495 CDS YP_001790072.1 171057723 6163117 1107502..1107720 1 NC_010524.1 hypothetical protein 1107720 6163117 Lcho_1036 Leptothrix cholodnii SP-6 hypothetical protein YP_001790072.1 1107502 D 395495 CDS YP_001790073.1 171057724 6163119 1108537..1110003 1 NC_010524.1 PFAM: Integrase catalytic region; KEGG: bvi:Bcep1808_6227 integrase, catalytic region; integrase catalytic subunit 1110003 6163119 Lcho_1038 Leptothrix cholodnii SP-6 integrase catalytic subunit YP_001790073.1 1108537 D 395495 CDS YP_001790074.1 171057725 6163120 1110000..1110824 1 NC_010524.1 PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; KEGG: pla:Plav_3437 IstB domain protein ATP-binding protein; IstB ATP-binding domain-containing protein 1110824 6163120 Lcho_1039 Leptothrix cholodnii SP-6 IstB ATP-binding domain-containing protein YP_001790074.1 1110000 D 395495 CDS YP_001790075.1 171057726 6163596 complement(1111587..1112312) 1 NC_010524.1 KEGG: mpt:Mpe_A2256 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 1112312 6163596 Lcho_1041 Leptothrix cholodnii SP-6 DNA polymerase III subunit epsilon YP_001790075.1 1111587 R 395495 CDS YP_001790076.1 171057727 6163597 complement(1112326..1112664) 1 NC_010524.1 TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: mpt:Mpe_A2257 putative ferredoxin (2Fe-2S) protein; ferredoxin, 2Fe-2S type, ISC system 1112664 6163597 Lcho_1042 Leptothrix cholodnii SP-6 ferredoxin, 2Fe-2S type, ISC system YP_001790076.1 1112326 R 395495 CDS YP_001790077.1 171057728 6163598 complement(1112680..1114545) 1 NC_010524.1 involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 1114545 hscA 6163598 hscA Leptothrix cholodnii SP-6 chaperone protein HscA YP_001790077.1 1112680 R 395495 CDS YP_001790078.1 171057729 6163599 complement(1114567..1115085) 1 NC_010524.1 TIGRFAM: co-chaperone Hsc20; PFAM: heat shock protein DnaJ domain protein; HSC20 oligomerisation; KEGG: mpt:Mpe_A2259 chaperone protein; co-chaperone Hsc20 1115085 6163599 Lcho_1044 Leptothrix cholodnii SP-6 co-chaperone Hsc20 YP_001790078.1 1114567 R 395495 CDS YP_001790079.1 171057730 6163600 complement(1115162..1115494) 1 NC_010524.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly protein IscA; PFAM: HesB/YadR/YfhF-family protein; KEGG: ajs:Ajs_2142 iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly protein IscA 1115494 6163600 Lcho_1045 Leptothrix cholodnii SP-6 iron-sulfur cluster assembly protein IscA YP_001790079.1 1115162 R 395495 CDS YP_001790080.1 171057731 6163459 complement(1115523..1115909) 1 NC_010524.1 TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: mpt:Mpe_A2261 (Fe-S) cluster formation/repair protein; FeS cluster assembly scaffold IscU 1115909 6163459 Lcho_1046 Leptothrix cholodnii SP-6 FeS cluster assembly scaffold IscU YP_001790080.1 1115523 R 395495 CDS YP_001790081.1 171057732 6163460 complement(1115934..1117169) 1 NC_010524.1 TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mpt:Mpe_A2262 cysteine desulfurase; cysteine desulfurase IscS 1117169 6163460 Lcho_1047 Leptothrix cholodnii SP-6 cysteine desulfurase IscS YP_001790081.1 1115934 R 395495 CDS YP_001790082.1 171057733 6163461 complement(1117226..1117759) 1 NC_010524.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mpt:Mpe_A2263 hypothetical protein; BadM/Rrf2 family transcriptional regulator 1117759 6163461 Lcho_1048 Leptothrix cholodnii SP-6 BadM/Rrf2 family transcriptional regulator YP_001790082.1 1117226 R 395495 CDS YP_001790083.1 171057734 6163462 complement(1117895..1118392) 1 NC_010524.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mpt:Mpe_A2264 low molecular weight tyrosine-phosphatase; protein tyrosine phosphatase 1118392 6163462 Lcho_1049 Leptothrix cholodnii SP-6 protein tyrosine phosphatase YP_001790083.1 1117895 R 395495 CDS YP_001790084.1 171057735 6163463 complement(1118389..1120500) 1 NC_010524.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1120500 6163463 Lcho_1050 Leptothrix cholodnii SP-6 excinuclease ABC subunit B YP_001790084.1 1118389 R 395495 CDS YP_001790085.1 171057736 6163464 1120591..1121787 1 NC_010524.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 1121787 6163464 Lcho_1051 Leptothrix cholodnii SP-6 aromatic amino acid aminotransferase YP_001790085.1 1120591 D 395495 CDS YP_001790086.1 171057737 6163130 complement(1121883..1122866) 1 NC_010524.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mpt:Mpe_A0901 alcohol dehydrogenase; quinone oxidoreductase 1122866 6163130 Lcho_1052 Leptothrix cholodnii SP-6 quinone oxidoreductase YP_001790086.1 1121883 R 395495 CDS YP_001790087.1 171057738 6163131 complement(1122984..1123259) 1 NC_010524.1 hypothetical protein 1123259 6163131 Lcho_1053 Leptothrix cholodnii SP-6 hypothetical protein YP_001790087.1 1122984 R 395495 CDS YP_001790088.1 171057739 6163132 complement(1123329..1125077) 1 NC_010524.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: rfr:Rfer_2728 serine/threonine protein kinase; putative signal transduction protein 1125077 6163132 Lcho_1054 Leptothrix cholodnii SP-6 putative signal transduction protein YP_001790088.1 1123329 R 395495 CDS YP_001790089.1 171057740 6163133 complement(1125185..1126222) 1 NC_010524.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 1126222 6163133 Lcho_1055 Leptothrix cholodnii SP-6 dihydroorotate dehydrogenase 2 YP_001790089.1 1125185 R 395495 CDS YP_001790090.1 171057741 6163134 1126259..1126921 1 NC_010524.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1126921 6163134 Lcho_1056 Leptothrix cholodnii SP-6 ribose-5-phosphate isomerase A YP_001790090.1 1126259 D 395495 CDS YP_001790091.1 171057742 6163135 complement(1126961..1128352) 1 NC_010524.1 KEGG: mmw:Mmwyl1_2332 hypothetical protein; hypothetical protein 1128352 6163135 Lcho_1057 Leptothrix cholodnii SP-6 hypothetical protein YP_001790091.1 1126961 R 395495 CDS YP_001790092.1 171057743 6162783 complement(1128343..1128657) 1 NC_010524.1 KEGG: abo:ABO_2005 hypothetical protein; hypothetical protein 1128657 6162783 Lcho_1058 Leptothrix cholodnii SP-6 hypothetical protein YP_001790092.1 1128343 R 395495 CDS YP_001790093.1 171057744 6162784 complement(1128773..1129579) 1 NC_010524.1 KEGG: mpt:Mpe_A1145 hypothetical protein; hypothetical protein 1129579 6162784 Lcho_1059 Leptothrix cholodnii SP-6 hypothetical protein YP_001790093.1 1128773 R 395495 CDS YP_001790094.1 171057745 6162785 complement(1129587..1130573) 1 NC_010524.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 1130573 6162785 Lcho_1060 Leptothrix cholodnii SP-6 homoserine kinase YP_001790094.1 1129587 R 395495 CDS YP_001790095.1 171057746 6162786 complement(1130581..1130916) 1 NC_010524.1 KEGG: pna:Pnap_1477 hypothetical protein; hypothetical protein 1130916 6162786 Lcho_1061 Leptothrix cholodnii SP-6 hypothetical protein YP_001790095.1 1130581 R 395495 CDS YP_001790096.1 171057747 6162787 1130970..1133774 1 NC_010524.1 KEGG: mpt:Mpe_A1148 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2; DNA polymerase I 1133774 6162787 Lcho_1062 Leptothrix cholodnii SP-6 DNA polymerase I YP_001790096.1 1130970 D 395495 CDS YP_001790097.1 171057748 6162788 1133771..1134871 1 NC_010524.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rfr:Rfer_2544 diguanylate cyclase; diguanylate cyclase 1134871 6162788 Lcho_1063 Leptothrix cholodnii SP-6 diguanylate cyclase YP_001790097.1 1133771 D 395495 CDS YP_001790098.1 171057749 6162562 1134913..1135428 1 NC_010524.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: pna:Pnap_2042 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1135428 6162562 Lcho_1064 Leptothrix cholodnii SP-6 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001790098.1 1134913 D 395495 CDS YP_001790099.1 171057750 6162563 1135527..1136534 1 NC_010524.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mes:Meso_4517 oxidoreductase-like; oxidoreductase domain-containing protein 1136534 6162563 Lcho_1065 Leptothrix cholodnii SP-6 oxidoreductase domain-containing protein YP_001790099.1 1135527 D 395495 CDS YP_001790100.1 171057751 6162564 complement(1136567..1138102) 1 NC_010524.1 PFAM: Methyltransferase type 11; KEGG: sit:TM1040_3839 methyltransferase type 11; type 11 methyltransferase 1138102 6162564 Lcho_1066 Leptothrix cholodnii SP-6 type 11 methyltransferase YP_001790100.1 1136567 R 395495 CDS YP_001790101.1 171057752 6162565 complement(1138261..1138869) 1 NC_010524.1 KEGG: mfa:Mfla_1132 protein of unknown function DUF1555; hypothetical protein 1138869 6162565 Lcho_1067 Leptothrix cholodnii SP-6 hypothetical protein YP_001790101.1 1138261 R 395495 CDS YP_001790102.1 171057753 6162566 complement(1139044..1139811) 1 NC_010524.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: azo:azo3212 ParA family protein; cobyrinic acid ac-diamide synthase 1139811 6162566 Lcho_1068 Leptothrix cholodnii SP-6 cobyrinic acid ac-diamide synthase YP_001790102.1 1139044 R 395495 CDS YP_001790103.1 171057754 6162567 complement(1139914..1141179) 1 NC_010524.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: pna:Pnap_1281 major facilitator superfamily MFS_1; major facilitator transporter 1141179 6162567 Lcho_1069 Leptothrix cholodnii SP-6 major facilitator transporter YP_001790103.1 1139914 R 395495 CDS YP_001790104.1 171057755 6162340 complement(1141206..1141958) 1 NC_010524.1 PFAM: Urease accessory protein UreF; KEGG: mpt:Mpe_A0664 urease accessory protein; urease accessory protein UreF 1141958 6162340 Lcho_1070 Leptothrix cholodnii SP-6 urease accessory protein UreF YP_001790104.1 1141206 R 395495 CDS YP_001790105.1 171057756 6162341 complement(1141958..1142662) 1 NC_010524.1 involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 1142662 ureE 6162341 ureE Leptothrix cholodnii SP-6 urease accessory protein UreE YP_001790105.1 1141958 R 395495 CDS YP_001790106.1 171057757 6162342 complement(1142783..1143304) 1 NC_010524.1 PFAM: protein of unknown function DUF477; KEGG: aav:Aave_0379 protein of unknown function DUF477; hypothetical protein 1143304 6162342 Lcho_1072 Leptothrix cholodnii SP-6 hypothetical protein YP_001790106.1 1142783 R 395495 CDS YP_001790107.1 171057758 6162343 complement(1143304..1144245) 1 NC_010524.1 PFAM: protein of unknown function DUF477; KEGG: pna:Pnap_0258 protein of unknown function DUF477; hypothetical protein 1144245 6162343 Lcho_1073 Leptothrix cholodnii SP-6 hypothetical protein YP_001790107.1 1143304 R 395495 CDS YP_001790108.1 171057759 6162344 complement(1144259..1144873) 1 NC_010524.1 PFAM: LemA family protein; KEGG: mpt:Mpe_A0145 LemA protein; LemA family protein 1144873 6162344 Lcho_1074 Leptothrix cholodnii SP-6 LemA family protein YP_001790108.1 1144259 R 395495 CDS YP_001790109.1 171057760 6162345 1145034..1145513 1 NC_010524.1 SMART: Rhodanese domain protein; rhodanese domain-containing protein 1145513 6162345 Lcho_1075 Leptothrix cholodnii SP-6 rhodanese domain-containing protein YP_001790109.1 1145034 D 395495 CDS YP_001790110.1 171057761 6162274 complement(1145498..1147225) 1 NC_010524.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 1147225 ureC 6162274 ureC Leptothrix cholodnii SP-6 urease subunit alpha YP_001790110.1 1145498 R 395495 CDS YP_001790111.1 171057762 6162275 complement(1147313..1147618) 1 NC_010524.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active; urease subunit beta 1147618 ureB 6162275 ureB Leptothrix cholodnii SP-6 urease subunit beta YP_001790111.1 1147313 R 395495 CDS YP_001790112.1 171057763 6162276 complement(1147618..1147797) 1 NC_010524.1 hypothetical protein 1147797 6162276 Lcho_1078 Leptothrix cholodnii SP-6 hypothetical protein YP_001790112.1 1147618 R 395495 CDS YP_001790113.1 171057764 6162277 complement(1147851..1148153) 1 NC_010524.1 KEGG: pol:Bpro_1352 urease subunit gamma; TIGRFAM: urease, gamma subunit; PFAM: Urease gamma subunit region; urease subunit gamma 1148153 6162277 Lcho_1079 Leptothrix cholodnii SP-6 urease subunit gamma YP_001790113.1 1147851 R 395495 CDS YP_001790114.1 171057765 6162278 complement(1148253..1149356) 1 NC_010524.1 KEGG: rso:RS02334 probable signal peptide protein; putative signal peptide protein 1149356 6162278 Lcho_1080 Leptothrix cholodnii SP-6 putative signal peptide protein YP_001790114.1 1148253 R 395495 CDS YP_001790115.1 171057766 6162279 complement(1149365..1150930) 1 NC_010524.1 KEGG: tdn:Tmden_1952 hypothetical protein; hypothetical protein 1150930 6162279 Lcho_1081 Leptothrix cholodnii SP-6 hypothetical protein YP_001790115.1 1149365 R 395495 CDS YP_001790116.1 171057767 6161521 1151306..1154968 1 NC_010524.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A0670 sensor histidine kinase/response regulator; histidine kinase 1154968 6161521 Lcho_1082 Leptothrix cholodnii SP-6 histidine kinase YP_001790116.1 1151306 D 395495 CDS YP_001790117.1 171057768 6161522 1154961..1155911 1 NC_010524.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: aav:Aave_3524 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 1155911 6161522 Lcho_1083 Leptothrix cholodnii SP-6 two component LuxR family transcriptional regulator YP_001790117.1 1154961 D 395495 CDS YP_001790118.1 171057769 6161523 1156020..1157297 1 NC_010524.1 TIGRFAM: urea ABC transporter, urea binding protein; KEGG: mpt:Mpe_A0697 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein; urea ABC transporter urea-binding protein 1157297 6161523 Lcho_1084 Leptothrix cholodnii SP-6 urea ABC transporter urea-binding protein YP_001790118.1 1156020 D 395495 CDS YP_001790119.1 171057770 6161524 1157448..1159034 1 NC_010524.1 TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: pol:Bpro_1394 inner-membrane translocator; urea ABC transporter permease UrtB 1159034 6161524 Lcho_1085 Leptothrix cholodnii SP-6 urea ABC transporter permease UrtB YP_001790119.1 1157448 D 395495 CDS YP_001790120.1 171057771 6161525 1159031..1160149 1 NC_010524.1 TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: mpt:Mpe_A0699 putative permease transporter transmembrane protein; urea ABC transporter permease UrtC 1160149 6161525 Lcho_1086 Leptothrix cholodnii SP-6 urea ABC transporter permease UrtC YP_001790120.1 1159031 D 395495 CDS YP_001790121.1 171057772 6161526 1160146..1161036 1 NC_010524.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: mpt:Mpe_A0700 branched-chain amino acid ABC transporter, ATP-binding protein, putative; urea ABC transporter ATP-binding protein UrtD 1161036 6161526 Lcho_1087 Leptothrix cholodnii SP-6 urea ABC transporter ATP-binding protein UrtD YP_001790121.1 1160146 D 395495 CDS YP_001790122.1 171057773 6161515 1161046..1161738 1 NC_010524.1 KEGG: mpt:Mpe_A0701 branched-chain amino acid ABC transporter, ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtE 1161738 6161515 Lcho_1088 Leptothrix cholodnii SP-6 urea ABC transporter ATP-binding protein UrtE YP_001790122.1 1161046 D 395495 CDS YP_001790123.1 171057774 6161516 1161778..1163154 1 NC_010524.1 PFAM: HI0933 family protein; KEGG: mpt:Mpe_A1785 hypothetical protein; hypothetical protein 1163154 6161516 Lcho_1089 Leptothrix cholodnii SP-6 hypothetical protein YP_001790123.1 1161778 D 395495 CDS YP_001790124.1 171057775 6161517 complement(1163214..1163885) 1 NC_010524.1 KEGG: mfa:Mfla_0451 alkaline phosphatase; hypothetical protein 1163885 6161517 Lcho_1090 Leptothrix cholodnii SP-6 hypothetical protein YP_001790124.1 1163214 R 395495 CDS YP_001790125.1 171057776 6161518 complement(1164193..1164882) 1 NC_010524.1 PFAM: protein of unknown function DUF1555; KEGG: mfa:Mfla_1122 hypothetical protein; hypothetical protein 1164882 6161518 Lcho_1091 Leptothrix cholodnii SP-6 hypothetical protein YP_001790125.1 1164193 R 395495 CDS YP_001790126.1 171057777 6161519 complement(1165091..1165927) 1 NC_010524.1 PFAM: Urease accessory protein UreD; KEGG: aav:Aave_1082 urease accessory protein UreD; urease accessory protein UreD 1165927 6161519 Lcho_1092 Leptothrix cholodnii SP-6 urease accessory protein UreD YP_001790126.1 1165091 R 395495 CDS YP_001790127.1 171057778 6161520 complement(1166555..1166773) 1 NC_010524.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: azo:azo2121 cold shock-like protein; cold-shock DNA-binding domain-containing protein 1166773 6161520 Lcho_1093 Leptothrix cholodnii SP-6 cold-shock DNA-binding domain-containing protein YP_001790127.1 1166555 R 395495 CDS YP_001790128.1 171057779 6160930 complement(1167015..1167515) 1 NC_010524.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mpt:Mpe_A0774 hypothetical protein; CMP/dCMP deaminase 1167515 6160930 Lcho_1094 Leptothrix cholodnii SP-6 CMP/dCMP deaminase YP_001790128.1 1167015 R 395495 CDS YP_001790129.1 171057780 6160931 complement(1167552..1168319) 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_1140 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1168319 6160931 Lcho_1095 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001790129.1 1167552 R 395495 CDS YP_001790130.1 171057781 6160932 complement(1168316..1169134) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dac:Daci_1139 ABC transporter related; ABC transporter-like protein 1169134 6160932 Lcho_1096 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001790130.1 1168316 R 395495 CDS YP_001790131.1 171057782 6160933 complement(1169142..1170230) 1 NC_010524.1 PFAM: NMT1/THI5 like domain protein; KEGG: aav:Aave_1093 twin-arginine translocation pathway signal; NMT1/THI5-like domain-containing protein 1170230 6160933 Lcho_1097 Leptothrix cholodnii SP-6 NMT1/THI5-like domain-containing protein YP_001790131.1 1169142 R 395495 CDS YP_001790132.1 171057783 6160934 complement(1170432..1171667) 1 NC_010524.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mpt:Mpe_A0775 hypothetical protein; peptidase dimerisation domain-containing protein 1171667 6160934 Lcho_1098 Leptothrix cholodnii SP-6 peptidase dimerisation domain-containing protein YP_001790132.1 1170432 R 395495 CDS YP_001790133.1 171057784 6160935 complement(1171664..1173442) 1 NC_010524.1 putative bifunctional enzyme; OHCU decarboxylase catalyzes 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline to allantoin and allantoate amidohydrolase converts allantoate to (S)-ureidoglycolate and ammonia; putative bifunctional OHCU decarboxylase/allantoate amidohydrolase 1173442 6160935 Lcho_1099 Leptothrix cholodnii SP-6 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase YP_001790133.1 1171664 R 395495 CDS YP_001790134.1 171057785 6160593 complement(1173563..1174573) 1 NC_010524.1 KEGG: pna:Pnap_0355 polysaccharide deacetylase; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase; urate catabolism protein 1174573 6160593 Lcho_1100 Leptothrix cholodnii SP-6 urate catabolism protein YP_001790134.1 1173563 R 395495 CDS YP_001790135.1 171057786 6160594 complement(1174570..1175349) 1 NC_010524.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mpt:Mpe_A0778 putative transcription regulator protein; GntR family transcriptional regulator 1175349 6160594 Lcho_1101 Leptothrix cholodnii SP-6 GntR family transcriptional regulator YP_001790135.1 1174570 R 395495 CDS YP_001790136.1 171057787 6160595 1175428..1175784 1 NC_010524.1 TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: mpt:Mpe_A0779 putative purine catabolism-related protein; hydroxyisourate hydrolase 1175784 6160595 Lcho_1102 Leptothrix cholodnii SP-6 hydroxyisourate hydrolase YP_001790136.1 1175428 D 395495 CDS YP_001790137.1 171057788 6160596 1175845..1177047 1 NC_010524.1 PFAM: protein of unknown function DUF989; KEGG: pna:Pnap_0357 protein of unknown function DUF989; hypothetical protein 1177047 6160596 Lcho_1103 Leptothrix cholodnii SP-6 hypothetical protein YP_001790137.1 1175845 D 395495 CDS YP_001790138.1 171057789 6160597 1177088..1178767 1 NC_010524.1 TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; KEGG: ajs:Ajs_3401 Na/Pi-cotransporter II-related protein; Na/Pi-cotransporter II-like protein 1178767 6160597 Lcho_1104 Leptothrix cholodnii SP-6 Na/Pi-cotransporter II-like protein YP_001790138.1 1177088 D 395495 CDS YP_001790139.1 171057790 6160598 complement(1178799..1180412) 1 NC_010524.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mms:mma_0510 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1180412 6160598 Lcho_1105 Leptothrix cholodnii SP-6 methyl-accepting chemotaxis sensory transducer YP_001790139.1 1178799 R 395495 CDS YP_001790140.1 171057791 6161307 complement(1180578..1182770) 1 NC_010524.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; KEGG: mpt:Mpe_A0214 signal transduction protein; diguanylate cyclase/phosphodiesterase 1182770 6161307 Lcho_1106 Leptothrix cholodnii SP-6 diguanylate cyclase/phosphodiesterase YP_001790140.1 1180578 R 395495 CDS YP_001790141.1 171057792 6161308 1182931..1184439 1 NC_010524.1 PFAM: helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; Ada metal-binding domain protein; AlkA domain protein; KEGG: spe:Spro_3547 transcriptional regulator, AraC family; AraC family transcriptional regulator 1184439 6161308 Lcho_1107 Leptothrix cholodnii SP-6 AraC family transcriptional regulator YP_001790141.1 1182931 D 395495 CDS YP_001790142.1 171057793 6161309 1184448..1184963 1 NC_010524.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: aav:Aave_2824 methylated-DNA--protein-cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase 1184963 6161309 Lcho_1108 Leptothrix cholodnii SP-6 methylated-DNA--protein-cysteine methyltransferase YP_001790142.1 1184448 D 395495 CDS YP_001790143.1 171057794 6161310 1184960..1185847 1 NC_010524.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc2507 probable transmembrane protein; hypothetical protein 1185847 6161310 Lcho_1109 Leptothrix cholodnii SP-6 hypothetical protein YP_001790143.1 1184960 D 395495 CDS YP_001790144.1 171057795 6161311 complement(1186030..1186797) 1 NC_010524.1 KEGG: mdo:100019988 similar to ifapsoriasin; ifapsoriasin-like protein 1186797 6161311 Lcho_1110 Leptothrix cholodnii SP-6 ifapsoriasin-like protein YP_001790144.1 1186030 R 395495 CDS YP_001790145.1 171057796 6161312 complement(1186986..1187960) 1 NC_010524.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: aav:Aave_2596 gluconolactonase; gluconolactonase 1187960 6161312 Lcho_1111 Leptothrix cholodnii SP-6 gluconolactonase YP_001790145.1 1186986 R 395495 CDS YP_001790146.1 171057797 6162294 complement(1187964..1189247) 1 NC_010524.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ppf:Pput_1201 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 1189247 6162294 Lcho_1112 Leptothrix cholodnii SP-6 TRAP dicarboxylate transporter subunit DctM YP_001790146.1 1187964 R 395495 CDS YP_001790147.1 171057798 6162295 complement(1189247..1189798) 1 NC_010524.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ppf:Pput_1202 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 1189798 6162295 Lcho_1113 Leptothrix cholodnii SP-6 tripartite ATP-independent periplasmic transporter DctQ YP_001790147.1 1189247 R 395495 CDS YP_001790148.1 171057799 6162296 complement(1189881..1190867) 1 NC_010524.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pmy:Pmen_3301 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit Dctp 1190867 6162296 Lcho_1114 Leptothrix cholodnii SP-6 TRAP dicarboxylate transporter subunit Dctp YP_001790148.1 1189881 R 395495 CDS YP_001790149.1 171057800 6162297 complement(1190945..1191763) 1 NC_010524.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: vei:Veis_1238 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1191763 6162297 Lcho_1115 Leptothrix cholodnii SP-6 NAD-dependent epimerase/dehydratase YP_001790149.1 1190945 R 395495 CDS YP_001790150.1 171057801 6162298 1191915..1192649 1 NC_010524.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mpt:Mpe_A0971 regulatory protein, GntR; GntR family transcriptional regulator 1192649 6162298 Lcho_1116 Leptothrix cholodnii SP-6 GntR family transcriptional regulator YP_001790150.1 1191915 D 395495 CDS YP_001790151.1 171057802 6162299 1192774..1193685 1 NC_010524.1 catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate; 5-dehydro-4-deoxyglucarate dehydratase 1193685 6162299 Lcho_1117 Leptothrix cholodnii SP-6 5-dehydro-4-deoxyglucarate dehydratase YP_001790151.1 1192774 D 395495 CDS YP_001790152.1 171057803 6162140 1193738..1195072 1 NC_010524.1 KEGG: pol:Bpro_3421 glucarate dehydratase; TIGRFAM: glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; glucarate dehydratase 1195072 6162140 Lcho_1118 Leptothrix cholodnii SP-6 glucarate dehydratase YP_001790152.1 1193738 D 395495 CDS YP_001790153.1 171057804 6162141 1195111..1196550 1 NC_010524.1 PFAM: Aldehyde Dehydrogenase_; KEGG: pol:Bpro_3422 aldehyde dehydrogenase; aldehyde dehydrogenase 1196550 6162141 Lcho_1119 Leptothrix cholodnii SP-6 aldehyde dehydrogenase YP_001790153.1 1195111 D 395495 CDS YP_001790154.1 171057805 6162142 1196582..1197535 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A0972 hypothetical protein; hypothetical protein 1197535 6162142 Lcho_1120 Leptothrix cholodnii SP-6 hypothetical protein YP_001790154.1 1196582 D 395495 CDS YP_001790155.1 171057806 6162143 1197549..1198493 1 NC_010524.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rme:Rmet_5274 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 1198493 6162143 Lcho_1121 Leptothrix cholodnii SP-6 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_001790155.1 1197549 D 395495 CDS YP_001790156.1 171057807 6162144 1198519..1199316 1 NC_010524.1 PFAM: HpcH/HpaI aldolase; KEGG: mpt:Mpe_A0974 2-dehydro-3-deoxyglucarate aldolase; HpcH/HpaI aldolase 1199316 6162144 Lcho_1122 Leptothrix cholodnii SP-6 HpcH/HpaI aldolase YP_001790156.1 1198519 D 395495 CDS YP_001790157.1 171057808 6162145 1199345..1200244 1 NC_010524.1 KEGG: pol:Bpro_3102 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; 2-hydroxy-3-oxopropionate reductase 1200244 6162145 Lcho_1123 Leptothrix cholodnii SP-6 2-hydroxy-3-oxopropionate reductase YP_001790157.1 1199345 D 395495 CDS YP_001790158.1 171057809 6163738 1200420..1203473 1 NC_010524.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mpt:Mpe_A2969 type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; general secretion pathway protein E 1203473 6163738 Lcho_1124 Leptothrix cholodnii SP-6 general secretion pathway protein E YP_001790158.1 1200420 D 395495 CDS YP_001790159.1 171057810 6163739 complement(1203474..1205429) 1 NC_010524.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: mpt:Mpe_A2031 putative DNA mismatch repair protein; DNA mismatch repair protein MutL 1205429 6163739 Lcho_1125 Leptothrix cholodnii SP-6 DNA mismatch repair protein MutL YP_001790159.1 1203474 R 395495 CDS YP_001790160.1 171057811 6163740 complement(1205482..1206600) 1 NC_010524.1 PFAM: Extracellular ligand-binding receptor; KEGG: dar:Daro_3540 extracellular ligand-binding receptor; extracellular ligand-binding receptor 1206600 6163740 Lcho_1126 Leptothrix cholodnii SP-6 extracellular ligand-binding receptor YP_001790160.1 1205482 R 395495 CDS YP_001790161.1 171057812 6163741 1206764..1207423 1 NC_010524.1 PFAM: SNARE associated Golgi protein; KEGG: mpt:Mpe_A2029 DedA protein (DSG-1 protein); hypothetical protein 1207423 6163741 Lcho_1127 Leptothrix cholodnii SP-6 hypothetical protein YP_001790161.1 1206764 D 395495 CDS YP_001790162.1 171057813 6163742 complement(1207448..1208965) 1 NC_010524.1 KEGG: dac:Daci_1894 hypothetical protein; hypothetical protein 1208965 6163742 Lcho_1128 Leptothrix cholodnii SP-6 hypothetical protein YP_001790162.1 1207448 R 395495 CDS YP_001790163.1 171057814 6163743 complement(1208991..1210562) 1 NC_010524.1 PFAM: cell wall hydrolase/autolysin; KEGG: mpt:Mpe_A2027 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 1210562 6163743 Lcho_1129 Leptothrix cholodnii SP-6 N-acetylmuramoyl-L-alanine amidase YP_001790163.1 1208991 R 395495 CDS YP_001790164.1 171057815 6163901 complement(1210591..1211073) 1 NC_010524.1 PFAM: protein of unknown function UPF0079; KEGG: mpt:Mpe_A2026 hypothetical protein; hypothetical protein 1211073 6163901 Lcho_1130 Leptothrix cholodnii SP-6 hypothetical protein YP_001790164.1 1210591 R 395495 CDS YP_001790165.1 171057816 6163902 1211077..1212162 1 NC_010524.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: mpt:Mpe_A2025 putative iron-sulfur 4Fe-4S ferredoxin protein; iron-sulfur cluster-binding protein 1212162 6163902 Lcho_1131 Leptothrix cholodnii SP-6 iron-sulfur cluster-binding protein YP_001790165.1 1211077 D 395495 CDS YP_001790166.1 171057817 6163903 complement(1212172..1213479) 1 NC_010524.1 PFAM: MOFRL domain protein; KEGG: azo:azo1162 probable hydroxypyruvate reductase; hydroxypyruvate reductase 1213479 6163903 Lcho_1132 Leptothrix cholodnii SP-6 hydroxypyruvate reductase YP_001790166.1 1212172 R 395495 CDS YP_001790167.1 171057818 6163904 complement(1213551..1214456) 1 NC_010524.1 KEGG: pol:Bpro_4563 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 2-hydroxy-3-oxopropionate reductase 1214456 6163904 Lcho_1133 Leptothrix cholodnii SP-6 2-hydroxy-3-oxopropionate reductase YP_001790167.1 1213551 R 395495 CDS YP_001790168.1 171057819 6163905 complement(1214488..1215267) 1 NC_010524.1 KEGG: pol:Bpro_4562 hydroxypyruvate isomerase; TIGRFAM: hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel; hydroxypyruvate isomerase 1215267 6163905 Lcho_1134 Leptothrix cholodnii SP-6 hydroxypyruvate isomerase YP_001790168.1 1214488 R 395495 CDS YP_001790169.1 171057820 6163906 complement(1215282..1217072) 1 NC_010524.1 catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; glyoxylate carboligase 1217072 6163906 Lcho_1135 Leptothrix cholodnii SP-6 glyoxylate carboligase YP_001790169.1 1215282 R 395495 CDS YP_001790170.1 171057821 6163809 complement(1217198..1218064) 1 NC_010524.1 KEGG: rfr:Rfer_0499 hypothetical protein; hypothetical protein 1218064 6163809 Lcho_1136 Leptothrix cholodnii SP-6 hypothetical protein YP_001790170.1 1217198 R 395495 CDS YP_001790171.1 171057822 6163810 complement(1218061..1218639) 1 NC_010524.1 KEGG: rfr:Rfer_0498 hypothetical protein; hypothetical protein 1218639 6163810 Lcho_1137 Leptothrix cholodnii SP-6 hypothetical protein YP_001790171.1 1218061 R 395495 CDS YP_001790172.1 171057823 6163811 complement(1218654..1219892) 1 NC_010524.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: rfr:Rfer_0497 oxidoreductase FAD/NAD(P)-binding; oxidoreductase FAD/NAD(P)-binding subunit 1219892 6163811 Lcho_1138 Leptothrix cholodnii SP-6 oxidoreductase FAD/NAD(P)-binding subunit YP_001790172.1 1218654 R 395495 CDS YP_001790173.1 171057824 6163812 complement(1219897..1219995) 1 NC_010524.1 hypothetical protein 1219995 6163812 Lcho_1139 Leptothrix cholodnii SP-6 hypothetical protein YP_001790173.1 1219897 R 395495 CDS YP_001790174.1 171057825 6163813 complement(1220088..1221452) 1 NC_010524.1 catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.; hydroxydechloroatrazine ethylaminohydrolase 1221452 6163813 Lcho_1140 Leptothrix cholodnii SP-6 hydroxydechloroatrazine ethylaminohydrolase YP_001790174.1 1220088 R 395495 CDS YP_001790175.1 171057826 6163814 complement(1221544..1223016) 1 NC_010524.1 TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: mpt:Mpe_A0781 putative permease transmembrane protein; xanthine permease 1223016 6163814 Lcho_1141 Leptothrix cholodnii SP-6 xanthine permease YP_001790175.1 1221544 R 395495 CDS YP_001790176.1 171057827 6163815 complement(1223140..1224360) 1 NC_010524.1 PFAM: protein of unknown function DUF989; KEGG: pna:Pnap_0357 protein of unknown function DUF989; hypothetical protein 1224360 6163815 Lcho_1142 Leptothrix cholodnii SP-6 hypothetical protein YP_001790176.1 1223140 R 395495 CDS YP_001790177.1 171057828 6163816 complement(1224614..1225531) 1 NC_010524.1 PFAM: Auxin Efflux Carrier; KEGG: mpt:Mpe_A2024 hypothetical protein; auxin efflux carrier 1225531 6163816 Lcho_1143 Leptothrix cholodnii SP-6 auxin efflux carrier YP_001790177.1 1224614 R 395495 CDS YP_001790178.1 171057829 6163817 complement(1225598..1226404) 1 NC_010524.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: gvi:gll1951 phosphopantetheinyltransferase family protein; 4'-phosphopantetheinyl transferase 1226404 6163817 Lcho_1144 Leptothrix cholodnii SP-6 4'-phosphopantetheinyl transferase YP_001790178.1 1225598 R 395495 CDS YP_001790179.1 171057830 6163818 1226576..1227553 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A2023 hypothetical protein; hypothetical protein 1227553 6163818 Lcho_1145 Leptothrix cholodnii SP-6 hypothetical protein YP_001790179.1 1226576 D 395495 CDS YP_001790180.1 171057831 6163819 1227628..1228488 1 NC_010524.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: pol:Bpro_3191 tyrosine recombinase XerD; tyrosine recombinase XerD 1228488 6163819 Lcho_1146 Leptothrix cholodnii SP-6 tyrosine recombinase XerD YP_001790180.1 1227628 D 395495 CDS YP_001790181.1 171057832 6163820 complement(1228492..1229244) 1 NC_010524.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A0132 amino acid ABC transporter; polar amino acid ABC transporter inner membrane subunit 1229244 6163820 Lcho_1147 Leptothrix cholodnii SP-6 polar amino acid ABC transporter inner membrane subunit YP_001790181.1 1228492 R 395495 CDS YP_001790182.1 171057833 6164027 complement(1229311..1230162) 1 NC_010524.1 PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: pna:Pnap_3442 extracellular solute-binding protein, family 3; extracellular solute-binding protein 1230162 6164027 Lcho_1148 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001790182.1 1229311 R 395495 CDS YP_001790183.1 171057834 6164028 complement(1230285..1231307) 1 NC_010524.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: aav:Aave_3092 membrane-bound metal-dependent hydrolase; membrane-bound metal-dependent hydrolase 1231307 6164028 Lcho_1149 Leptothrix cholodnii SP-6 membrane-bound metal-dependent hydrolase YP_001790183.1 1230285 R 395495 CDS YP_001790184.1 171057835 6164029 1231596..1232387 1 NC_010524.1 KEGG: spu:758554 hypothetical protein LOC758554; hypothetical protein 1232387 6164029 Lcho_1150 Leptothrix cholodnii SP-6 hypothetical protein YP_001790184.1 1231596 D 395495 CDS YP_001790185.1 171057836 6164030 complement(1232470..1233180) 1 NC_010524.1 hypothetical protein 1233180 6164030 Lcho_1151 Leptothrix cholodnii SP-6 hypothetical protein YP_001790185.1 1232470 R 395495 CDS YP_001790186.1 171057837 6164031 1233388..1234299 1 NC_010524.1 KEGG: spu:758554 hypothetical protein LOC758554; hypothetical protein 1234299 6164031 Lcho_1152 Leptothrix cholodnii SP-6 hypothetical protein YP_001790186.1 1233388 D 395495 CDS YP_001790187.1 171057838 6164032 complement(1237064..1237354) 1 NC_010524.1 TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: rfr:Rfer_3908 protein of unknown function DUF196; CRISPR-associated Cas2 family protein 1237354 6164032 Lcho_1153 Leptothrix cholodnii SP-6 CRISPR-associated Cas2 family protein YP_001790187.1 1237064 R 395495 CDS YP_001790188.1 171057839 6163077 complement(1237367..1238398) 1 NC_010524.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: eba:ebA3283 hypothetical protein; CRISPR-associated Cas1 family protein 1238398 6163077 Lcho_1154 Leptothrix cholodnii SP-6 CRISPR-associated Cas1 family protein YP_001790188.1 1237367 R 395495 CDS YP_001790189.1 171057840 6163078 complement(1238398..1239036) 1 NC_010524.1 TIGRFAM: CRISPR-associated protein Cas4; PFAM: protein of unknown function DUF83; KEGG: eba:ebA3284 predicted RecB family exonuclease protein; CRISPR-associated Cas4 family protein 1239036 6163078 Lcho_1155 Leptothrix cholodnii SP-6 CRISPR-associated Cas4 family protein YP_001790189.1 1238398 R 395495 CDS YP_001790190.1 171057841 6163079 1239096..1239341 1 NC_010524.1 TIGRFAM: addiction module component, TIGR02574 family; PFAM: Putative addiction module component CHP02574 family protein; addiction module antitoxin 1239341 6163079 Lcho_1156 Leptothrix cholodnii SP-6 addiction module antitoxin YP_001790190.1 1239096 D 395495 CDS YP_001790191.1 171057842 6163080 1239350..1239643 1 NC_010524.1 PFAM: plasmid stabilization system; KEGG: noc:Noc_2071 plasmid stabilization system protein; plasmid stabilization system protein 1239643 6163080 Lcho_1157 Leptothrix cholodnii SP-6 plasmid stabilization system protein YP_001790191.1 1239350 D 395495 CDS YP_001790192.1 171057843 6163081 complement(1239661..1240569) 1 NC_010524.1 TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein, Csd2 family; PFAM: CRISPR-associated protein TM1801; KEGG: mca:MCA0654 CRISPR-associated TM1801 family protein; CRISPR-associated Csd2 family protein 1240569 6163081 Lcho_1158 Leptothrix cholodnii SP-6 CRISPR-associated Csd2 family protein YP_001790192.1 1239661 R 395495 CDS YP_001790193.1 171057844 6163082 complement(1240596..1242383) 1 NC_010524.1 TIGRFAM: CRISPR-associated protein, Csd1 family; PFAM: CRISPR-associated protein CT1133; KEGG: gme:Gmet_1066 CRISPR-associated CT1133 family protein; CRISPR-associated RAMP Csd1 family protein 1242383 6163082 Lcho_1159 Leptothrix cholodnii SP-6 CRISPR-associated RAMP Csd1 family protein YP_001790193.1 1240596 R 395495 CDS YP_001790194.1 171057845 6164033 complement(1242380..1243036) 1 NC_010524.1 TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: mca:MCA0656 CRISPR-associated CT1134 family protein; CRISPR-associated Cas5 family protein 1243036 6164033 Lcho_1160 Leptothrix cholodnii SP-6 CRISPR-associated Cas5 family protein YP_001790194.1 1242380 R 395495 CDS YP_001790195.1 171057846 6164034 complement(1243065..1245449) 1 NC_010524.1 PFAM: DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mca:MCA0657 CRISPR-associated helicase Cas3; DEAD/DEAH box helicase 1245449 6164034 Lcho_1161 Leptothrix cholodnii SP-6 DEAD/DEAH box helicase YP_001790195.1 1243065 R 395495 CDS YP_001790196.1 171057847 6164035 1245749..1246462 1 NC_010524.1 KEGG: mpt:Mpe_A3300 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1246462 6164035 Lcho_1162 Leptothrix cholodnii SP-6 methyl-accepting chemotaxis sensory transducer YP_001790196.1 1245749 D 395495 CDS YP_001790197.1 171057848 6164036 complement(1246482..1247501) 1 NC_010524.1 PFAM: Hsp33 protein; KEGG: pna:Pnap_1179 HSP33 protein; Hsp33 protein 1247501 6164036 Lcho_1163 Leptothrix cholodnii SP-6 Hsp33 protein YP_001790197.1 1246482 R 395495 CDS YP_001790198.1 171057849 6164037 complement(1247505..1248029) 1 NC_010524.1 KEGG: pol:Bpro_3188 transferase hexapeptide repeat; hexapaptide repeat-containing transferase 1248029 6164037 Lcho_1164 Leptothrix cholodnii SP-6 hexapaptide repeat-containing transferase YP_001790198.1 1247505 R 395495 CDS YP_001790199.1 171057850 6164038 1248093..1248926 1 NC_010524.1 PFAM: protein of unknown function DUF455; KEGG: aav:Aave_1317 protein of unknown function DUF455; hypothetical protein 1248926 6164038 Lcho_1165 Leptothrix cholodnii SP-6 hypothetical protein YP_001790199.1 1248093 D 395495 CDS YP_001790200.1 171057851 6162673 1248933..1249817 1 NC_010524.1 PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: pna:Pnap_1267 ion transport protein; Ion transport protein 1249817 6162673 Lcho_1166 Leptothrix cholodnii SP-6 Ion transport protein YP_001790200.1 1248933 D 395495 CDS YP_001790201.1 171057852 6162674 complement(1249839..1250441) 1 NC_010524.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: mpt:Mpe_A2020 hypothetical protein; multiple antibiotic resistance (MarC)-like protein 1250441 6162674 Lcho_1167 Leptothrix cholodnii SP-6 multiple antibiotic resistance (MarC)-like protein YP_001790201.1 1249839 R 395495 CDS YP_001790202.1 171057853 6162675 complement(1250475..1250936) 1 NC_010524.1 KEGG: aav:Aave_1320 hypothetical protein; hypothetical protein 1250936 6162675 Lcho_1168 Leptothrix cholodnii SP-6 hypothetical protein YP_001790202.1 1250475 R 395495 CDS YP_001790203.1 171057854 6162676 1251019..1252050 1 NC_010524.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: fre:Franean1_6766 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 1252050 6162676 Lcho_1169 Leptothrix cholodnii SP-6 endonuclease/exonuclease/phosphatase YP_001790203.1 1251019 D 395495 CDS YP_001790204.1 171057855 6162677 1252174..1253763 1 NC_010524.1 PFAM: FAD linked oxidase domain protein; biotin/lipoate A/B protein ligase; KEGG: mpt:Mpe_A3638 putative glycolate oxidase (FAD-linked subunit) oxidoreductase protein; FAD linked oxidase domain-containing protein 1253763 6162677 Lcho_1170 Leptothrix cholodnii SP-6 FAD linked oxidase domain-containing protein YP_001790204.1 1252174 D 395495 CDS YP_001790205.1 171057856 6162678 1253770..1254897 1 NC_010524.1 PFAM: FAD linked oxidase domain protein; KEGG: mpt:Mpe_A3639 FAD linked oxidase; FAD linked oxidase domain-containing protein 1254897 6162678 Lcho_1171 Leptothrix cholodnii SP-6 FAD linked oxidase domain-containing protein YP_001790205.1 1253770 D 395495 CDS YP_001790206.1 171057857 6163058 1254913..1256169 1 NC_010524.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mpt:Mpe_A3640 glycolate oxidase iron-sulfur subunit; glycolate oxidase iron-sulfur subunit 1256169 glcF 6163058 glcF Leptothrix cholodnii SP-6 glycolate oxidase iron-sulfur subunit YP_001790206.1 1254913 D 395495 CDS YP_001790207.1 171057858 6163059 complement(1256240..1256524) 1 NC_010524.1 PFAM: Septum formation initiator; KEGG: mpt:Mpe_A2848 hypothetical protein; septum formation initiator 1256524 6163059 Lcho_1173 Leptothrix cholodnii SP-6 septum formation initiator YP_001790207.1 1256240 R 395495 CDS YP_001790208.1 171057859 6163060 complement(1256531..1257814) 1 NC_010524.1 PFAM: enolase; KEGG: ajs:Ajs_0997 phosphopyruvate hydratase; phosphopyruvate hydratase 1257814 6163060 Lcho_1174 Leptothrix cholodnii SP-6 phosphopyruvate hydratase YP_001790208.1 1256531 R 395495 CDS YP_001790209.1 171057860 6163061 complement(1257928..1258785) 1 NC_010524.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 1258785 6163061 Lcho_1175 Leptothrix cholodnii SP-6 2-dehydro-3-deoxyphosphooctonate aldolase YP_001790209.1 1257928 R 395495 CDS YP_001790210.1 171057861 6163062 complement(1258782..1260473) 1 NC_010524.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1260473 pyrG 6163062 pyrG Leptothrix cholodnii SP-6 CTP synthetase YP_001790210.1 1258782 R 395495 CDS YP_001790211.1 171057862 6163063 complement(1260651..1261511) 1 NC_010524.1 KEGG: dac:Daci_1821 pantoate--beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; pantoate--beta-alanine ligase 1261511 6163063 Lcho_1177 Leptothrix cholodnii SP-6 pantoate--beta-alanine ligase YP_001790211.1 1260651 R 395495 CDS YP_001790212.1 171057863 6161721 complement(1261525..1262394) 1 NC_010524.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 1262394 panB 6161721 panB Leptothrix cholodnii SP-6 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_001790212.1 1261525 R 395495 CDS YP_001790213.1 171057864 6161722 1262800..1264035 1 NC_010524.1 KEGG: sal:Sala_1918 hypothetical protein; cellulose biosynthesis protein CelD 1264035 6161722 Lcho_1179 Leptothrix cholodnii SP-6 cellulose biosynthesis protein CelD YP_001790213.1 1262800 D 395495 CDS YP_001790214.1 171057865 6161723 complement(1264067..1264894) 1 NC_010524.1 KEGG: mpt:Mpe_A2843 hypothetical protein; hypothetical protein 1264894 6161723 Lcho_1180 Leptothrix cholodnii SP-6 hypothetical protein YP_001790214.1 1264067 R 395495 CDS YP_001790215.1 171057866 6161724 complement(1264891..1267551) 1 NC_010524.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1267551 6161724 Lcho_1181 Leptothrix cholodnii SP-6 DNA mismatch repair protein MutS YP_001790215.1 1264891 R 395495 CDS YP_001790216.1 171057867 6161725 1267942..1268160 1 NC_010524.1 hypothetical protein 1268160 6161725 Lcho_1182 Leptothrix cholodnii SP-6 hypothetical protein YP_001790216.1 1267942 D 395495 CDS YP_001790217.1 171057868 6161726 1268261..1269562 1 NC_010524.1 KEGG: pol:Bpro_1182 membrane protein-like; membrane protein 1269562 6161726 Lcho_1183 Leptothrix cholodnii SP-6 membrane protein YP_001790217.1 1268261 D 395495 CDS YP_001790218.1 171057869 6163485 complement(1269588..1270094) 1 NC_010524.1 PFAM: regulatory protein MarR; KEGG: pna:Pnap_2122 transcriptional regulator, MarR family; MarR family transcriptional regulator 1270094 6163485 Lcho_1184 Leptothrix cholodnii SP-6 MarR family transcriptional regulator YP_001790218.1 1269588 R 395495 CDS YP_001790219.1 171057870 6163486 1270266..1271033 1 NC_010524.1 TIGRFAM: 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_2123 short-chain dehydrogenase/reductase SDR; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase 1271033 6163486 Lcho_1185 Leptothrix cholodnii SP-6 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase YP_001790219.1 1270266 D 395495 CDS YP_001790220.1 171057871 6163487 1271078..1271866 1 NC_010524.1 TIGRFAM: 2-ketocyclohexanecarboxyl-CoA hydrolase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pna:Pnap_2124 naphthoate synthase; 2-ketocyclohexanecarboxyl-CoA hydrolase 1271866 6163487 Lcho_1186 Leptothrix cholodnii SP-6 2-ketocyclohexanecarboxyl-CoA hydrolase YP_001790220.1 1271078 D 395495 CDS YP_001790221.1 171057872 6163488 1271886..1273055 1 NC_010524.1 TIGRFAM: cyclohexanecarboxyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pna:Pnap_2125 acyl-CoA dehydrogenase domain protein; cyclohexanecarboxyl-CoA dehydrogenase 1273055 6163488 Lcho_1187 Leptothrix cholodnii SP-6 cyclohexanecarboxyl-CoA dehydrogenase YP_001790221.1 1271886 D 395495 CDS YP_001790222.1 171057873 6163489 1273092..1274735 1 NC_010524.1 AliA; in Rhodopseudomonas palustris, this enzyme was found to act on 3-chlorobenzoate and allows the organism to grow on this substrate; cyclohexanecarboxylate-CoA ligase 1274735 6163489 Lcho_1188 Leptothrix cholodnii SP-6 cyclohexanecarboxylate-CoA ligase YP_001790222.1 1273092 D 395495 CDS YP_001790223.1 171057874 6163490 1274769..1275761 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: pna:Pnap_2127 uncharacterized protein UPF0065; hypothetical protein 1275761 6163490 Lcho_1189 Leptothrix cholodnii SP-6 hypothetical protein YP_001790223.1 1274769 D 395495 CDS YP_001790224.1 171057875 6162970 1275801..1276577 1 NC_010524.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pna:Pnap_2128 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1276577 6162970 Lcho_1190 Leptothrix cholodnii SP-6 enoyl-CoA hydratase/isomerase YP_001790224.1 1275801 D 395495 CDS YP_001790225.1 171057876 6162971 1276622..1277782 1 NC_010524.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pna:Pnap_2129 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1277782 6162971 Lcho_1191 Leptothrix cholodnii SP-6 acyl-CoA dehydrogenase domain-containing protein YP_001790225.1 1276622 D 395495 CDS YP_001790226.1 171057877 6162972 1277799..1279484 1 NC_010524.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: mpt:Mpe_A1443 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 1279484 6162972 Lcho_1192 Leptothrix cholodnii SP-6 electron-transferring-flavoprotein dehydrogenase YP_001790226.1 1277799 D 395495 CDS YP_001790227.1 171057878 6162973 1279553..1280737 1 NC_010524.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pna:Pnap_2130 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 1280737 6162973 Lcho_1193 Leptothrix cholodnii SP-6 acyl-CoA dehydrogenase domain-containing protein YP_001790227.1 1279553 D 395495 CDS YP_001790228.1 171057879 6162974 1280751..1281500 1 NC_010524.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dac:Daci_2390 electron transfer flavoprotein alpha/beta-subunit; electron transfer flavoprotein alpha/beta-subunit 1281500 6162974 Lcho_1194 Leptothrix cholodnii SP-6 electron transfer flavoprotein alpha/beta-subunit YP_001790228.1 1280751 D 395495 CDS YP_001790229.1 171057880 6162975 1281503..1282429 1 NC_010524.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: mpt:Mpe_A1297 electron transfer flavoprotein alpha-subunit; electron transfer flavoprotein subunit alpha 1282429 6162975 Lcho_1195 Leptothrix cholodnii SP-6 electron transfer flavoprotein subunit alpha YP_001790229.1 1281503 D 395495 CDS YP_001790230.1 171057881 6160963 1282432..1283217 1 NC_010524.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pna:Pnap_2941 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1283217 6160963 Lcho_1196 Leptothrix cholodnii SP-6 enoyl-CoA hydratase/isomerase YP_001790230.1 1282432 D 395495 CDS YP_001790231.1 171057882 6160964 1283214..1284728 1 NC_010524.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: pna:Pnap_2940 3-hydroxybutyryl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase 1284728 6160964 Lcho_1197 Leptothrix cholodnii SP-6 3-hydroxybutyryl-CoA dehydrogenase YP_001790231.1 1283214 D 395495 CDS YP_001790232.1 171057883 6160965 1284725..1285930 1 NC_010524.1 KEGG: pol:Bpro_1231 beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; beta-ketoadipyl CoA thiolase 1285930 6160965 Lcho_1198 Leptothrix cholodnii SP-6 beta-ketoadipyl CoA thiolase YP_001790232.1 1284725 D 395495 CDS YP_001790233.1 171057884 6160966 complement(1285956..1286888) 1 NC_010524.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pna:Pnap_2708 transcriptional regulator, AraC family; AraC family transcriptional regulator 1286888 6160966 Lcho_1199 Leptothrix cholodnii SP-6 AraC family transcriptional regulator YP_001790233.1 1285956 R 395495 CDS YP_001790234.1 171057885 6160967 1287028..1287891 1 NC_010524.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_2709 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1287891 6160967 Lcho_1200 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001790234.1 1287028 D 395495 CDS YP_001790235.1 171057886 6160968 1287888..1289591 1 NC_010524.1 proposed role in polysaccahride synthesis; putative succinate dehydrogenase 1289591 6160968 Lcho_1201 Leptothrix cholodnii SP-6 putative succinate dehydrogenase YP_001790235.1 1287888 D 395495 CDS YP_001790236.1 171057887 6161152 1289588..1289950 1 NC_010524.1 PFAM: NIPSNAP family containing protein; KEGG: pna:Pnap_2711 NIPSNAP family containing protein; NIPSNAP family protein 1289950 6161152 Lcho_1202 Leptothrix cholodnii SP-6 NIPSNAP family protein YP_001790236.1 1289588 D 395495 CDS YP_001790237.1 171057888 6161153 1289947..1290744 1 NC_010524.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_2712 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1290744 6161153 Lcho_1203 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001790237.1 1289947 D 395495 CDS YP_001790238.1 171057889 6161154 1290784..1291632 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: pna:Pnap_2713 inner-membrane translocator; inner-membrane translocator 1291632 6161154 Lcho_1204 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001790238.1 1290784 D 395495 CDS YP_001790239.1 171057890 6161155 1291654..1292655 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: pna:Pnap_2714 inner-membrane translocator; inner-membrane translocator 1292655 6161155 Lcho_1205 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001790239.1 1291654 D 395495 CDS YP_001790240.1 171057891 6161156 1292672..1293391 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_2715 ABC transporter related; ABC transporter-like protein 1293391 6161156 Lcho_1206 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001790240.1 1292672 D 395495 CDS YP_001790241.1 171057892 6161157 1293388..1294086 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_2716 ABC transporter related; ABC transporter-like protein 1294086 6161157 Lcho_1207 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001790241.1 1293388 D 395495 CDS YP_001790242.1 171057893 6160804 1294122..1295312 1 NC_010524.1 PFAM: Extracellular ligand-binding receptor; KEGG: pna:Pnap_2717 extracellular ligand-binding receptor; extracellular ligand-binding receptor 1295312 6160804 Lcho_1208 Leptothrix cholodnii SP-6 extracellular ligand-binding receptor YP_001790242.1 1294122 D 395495 CDS YP_001790243.1 171057894 6160805 1295384..1295971 1 NC_010524.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: mpt:Mpe_A1354 predicted rhodopsin-like G-protein coupled receptor superfamily; hemerythrin HHE cation-binding domain-containing protein 1295971 6160805 Lcho_1209 Leptothrix cholodnii SP-6 hemerythrin HHE cation-binding domain-containing protein YP_001790243.1 1295384 D 395495 CDS YP_001790244.1 171057895 6160806 1296094..1296354 1 NC_010524.1 KEGG: pna:Pnap_3659 hypothetical protein; hypothetical protein 1296354 6160806 Lcho_1210 Leptothrix cholodnii SP-6 hypothetical protein YP_001790244.1 1296094 D 395495 CDS YP_001790245.1 171057896 6160807 1296419..1296955 1 NC_010524.1 PFAM: cytochrome B561; KEGG: pna:Pnap_3658 cytochrome b561; cytochrome B561 1296955 6160807 Lcho_1211 Leptothrix cholodnii SP-6 cytochrome B561 YP_001790245.1 1296419 D 395495 CDS YP_001790246.1 171057897 6160808 complement(1296968..1298539) 1 NC_010524.1 PFAM: coenzyme A transferase; KEGG: pna:Pnap_2700 coenzyme A transferase; coenzyme A transferase 1298539 6160808 Lcho_1212 Leptothrix cholodnii SP-6 coenzyme A transferase YP_001790246.1 1296968 R 395495 CDS YP_001790247.1 171057898 6160809 complement(1298536..1299696) 1 NC_010524.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pna:Pnap_2701 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 1299696 6160809 Lcho_1213 Leptothrix cholodnii SP-6 acyl-CoA dehydrogenase domain-containing protein YP_001790247.1 1298536 R 395495 CDS YP_001790248.1 171057899 6163847 complement(1299705..1300847) 1 NC_010524.1 PFAM: Extracellular ligand-binding receptor; KEGG: pna:Pnap_1650 extracellular ligand-binding receptor; extracellular ligand-binding receptor 1300847 6163847 Lcho_1214 Leptothrix cholodnii SP-6 extracellular ligand-binding receptor YP_001790248.1 1299705 R 395495 CDS YP_001790249.1 171057900 6163848 1300941..1302047 1 NC_010524.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bja:blr3664 putative oxidoreductase; oxidoreductase domain-containing protein 1302047 6163848 Lcho_1215 Leptothrix cholodnii SP-6 oxidoreductase domain-containing protein YP_001790249.1 1300941 D 395495 CDS YP_001790250.1 171057901 6163849 1302113..1302925 1 NC_010524.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: xau:Xaut_2699 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 1302925 6163849 Lcho_1216 Leptothrix cholodnii SP-6 xylose isomerase domain-containing protein YP_001790250.1 1302113 D 395495 CDS YP_001790251.1 171057902 6163850 1302922..1303725 1 NC_010524.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_2720 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1303725 6163850 Lcho_1217 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001790251.1 1302922 D 395495 CDS YP_001790252.1 171057903 6163851 complement(1303757..1305052) 1 NC_010524.1 PFAM: inositol monophosphatase; KEGG: mpt:Mpe_A2841 inositol-1(or 4)-monophosphatase; inositol-phosphate phosphatase 1305052 6163851 Lcho_1218 Leptothrix cholodnii SP-6 inositol-phosphate phosphatase YP_001790252.1 1303757 R 395495 CDS YP_001790253.1 171057904 6163852 1305199..1305957 1 NC_010524.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mpt:Mpe_A2840 putative tRNA/rRNA methyltransferase protein; RNA methyltransferase 1305957 6163852 Lcho_1219 Leptothrix cholodnii SP-6 RNA methyltransferase YP_001790253.1 1305199 D 395495 CDS YP_001790254.1 171057905 6160792 1306065..1306844 1 NC_010524.1 TIGRFAM: serine O-acetyltransferase; KEGG: mpt:Mpe_A2839 serine O-acetyltransferase; serine O-acetyltransferase 1306844 6160792 Lcho_1220 Leptothrix cholodnii SP-6 serine O-acetyltransferase YP_001790254.1 1306065 D 395495 CDS YP_001790255.1 171057906 6160793 complement(1306837..1307457) 1 NC_010524.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: mpt:Mpe_A2838 molybdopterin biosynthesis Mog protein; molybdenum cofactor synthesis domain-containing protein 1307457 6160793 Lcho_1221 Leptothrix cholodnii SP-6 molybdenum cofactor synthesis domain-containing protein YP_001790255.1 1306837 R 395495 CDS YP_001790256.1 171057907 6160794 complement(1307450..1308103) 1 NC_010524.1 PFAM: protein of unknown function DUF615; KEGG: mpt:Mpe_A2837 hypothetical protein; hypothetical protein 1308103 6160794 Lcho_1222 Leptothrix cholodnii SP-6 hypothetical protein YP_001790256.1 1307450 R 395495 CDS YP_001790257.1 171057908 6160795 1308308..1309732 1 NC_010524.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: mpt:Mpe_A2836 PmbA protein; peptidase U62 modulator of DNA gyrase 1309732 6160795 Lcho_1223 Leptothrix cholodnii SP-6 peptidase U62 modulator of DNA gyrase YP_001790257.1 1308308 D 395495 CDS YP_001790258.1 171057909 6160796 1309852..1310934 1 NC_010524.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pol:Bpro_1749 twin-arginine translocation pathway signal; TRAP C4-dicarboxylate transport system permease subunit DctP 1310934 6160796 Lcho_1224 Leptothrix cholodnii SP-6 TRAP C4-dicarboxylate transport system permease subunit DctP YP_001790258.1 1309852 D 395495 CDS YP_001790259.1 171057910 6160797 1311046..1311966 1 NC_010524.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: vei:Veis_2234 protein of unknown function DUF6, transmembrane; hypothetical protein 1311966 6160797 Lcho_1225 Leptothrix cholodnii SP-6 hypothetical protein YP_001790259.1 1311046 D 395495 CDS YP_001790260.1 171057911 6163926 1311999..1312790 1 NC_010524.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpt:Mpe_A3053 oxidoreductase; short-chain dehydrogenase/reductase SDR 1312790 6163926 Lcho_1226 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001790260.1 1311999 D 395495 CDS YP_001790261.1 171057912 6163927 complement(1312818..1313771) 1 NC_010524.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mpt:Mpe_A3051 permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein 1313771 6163927 Lcho_1227 Leptothrix cholodnii SP-6 hypothetical protein YP_001790261.1 1312818 R 395495 CDS YP_001790262.1 171057913 6163928 1313935..1314918 1 NC_010524.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mpt:Mpe_A3049 quinone oxidoreductase, putative; alcohol dehydrogenase 1314918 6163928 Lcho_1228 Leptothrix cholodnii SP-6 alcohol dehydrogenase YP_001790262.1 1313935 D 395495 CDS YP_001790263.1 171057914 6163929 1315029..1317017 1 NC_010524.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RS01896 probable TonB-dependent receptor signal peptide protein; TonB-dependent receptor plug 1317017 6163929 Lcho_1229 Leptothrix cholodnii SP-6 TonB-dependent receptor plug YP_001790263.1 1315029 D 395495 CDS YP_001790264.1 171057915 6163930 1317039..1317596 1 NC_010524.1 KEGG: rso:RS01895 putative transmembrane protein; putative transmembrane protein 1317596 6163930 Lcho_1230 Leptothrix cholodnii SP-6 putative transmembrane protein YP_001790264.1 1317039 D 395495 CDS YP_001790265.1 171057916 6163931 1317593..1319593 1 NC_010524.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rso:RS01894 hypothetical protein; diguanylate cyclase/phosphodiesterase 1319593 6163931 Lcho_1231 Leptothrix cholodnii SP-6 diguanylate cyclase/phosphodiesterase YP_001790265.1 1317593 D 395495 CDS YP_001790266.1 171057917 6163956 complement(1319609..1319914) 1 NC_010524.1 KEGG: mpt:Mpe_A3050 hypothetical protein; hypothetical protein 1319914 6163956 Lcho_1232 Leptothrix cholodnii SP-6 hypothetical protein YP_001790266.1 1319609 R 395495 CDS YP_001790267.1 171057918 6163957 complement(1319925..1320794) 1 NC_010524.1 KEGG: mpt:Mpe_A3048 integral membrane protein; integral membrane protein 1320794 6163957 Lcho_1233 Leptothrix cholodnii SP-6 integral membrane protein YP_001790267.1 1319925 R 395495 CDS YP_001790268.1 171057919 6163958 complement(1320882..1321394) 1 NC_010524.1 TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: mpt:Mpe_A3047 signal peptidase II; lipoprotein signal peptidase 1321394 6163958 Lcho_1234 Leptothrix cholodnii SP-6 lipoprotein signal peptidase YP_001790268.1 1320882 R 395495 CDS YP_001790269.1 171057920 6163959 complement(1321445..1322332) 1 NC_010524.1 PFAM: aldo/keto reductase; KEGG: dsh:Dshi_2756 aldo/keto reductase; aldo/keto reductase 1322332 6163959 Lcho_1235 Leptothrix cholodnii SP-6 aldo/keto reductase YP_001790269.1 1321445 R 395495 CDS YP_001790270.1 171057921 6163960 complement(1322380..1325376) 1 NC_010524.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: mpt:Mpe_A3046 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 1325376 6163960 Lcho_1236 Leptothrix cholodnii SP-6 isoleucyl-tRNA synthetase YP_001790270.1 1322380 R 395495 CDS YP_001790271.1 171057922 6163961 complement(1325489..1326526) 1 NC_010524.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 1326526 6163961 Lcho_1237 Leptothrix cholodnii SP-6 bifunctional riboflavin kinase/FMN adenylyltransferase YP_001790271.1 1325489 R 395495 CDS YP_001790272.1 171057923 6160742 complement(1326564..1327196) 1 NC_010524.1 KEGG: rfr:Rfer_2550 putative fructose transport system kinase; putative fructose transport system kinase 1327196 6160742 Lcho_1238 Leptothrix cholodnii SP-6 putative fructose transport system kinase YP_001790272.1 1326564 R 395495 CDS YP_001790273.1 171057924 6160743 complement(1327217..1328356) 1 NC_010524.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: aav:Aave_3440 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 1328356 6160743 Lcho_1239 Leptothrix cholodnii SP-6 acyl-CoA dehydrogenase domain-containing protein YP_001790273.1 1327217 R 395495 CDS YP_001790274.1 171057925 6160744 complement(1328370..1329509) 1 NC_010524.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ajs:Ajs_3393 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 1329509 6160744 Lcho_1240 Leptothrix cholodnii SP-6 acyl-CoA dehydrogenase domain-containing protein YP_001790274.1 1328370 R 395495 CDS YP_001790275.1 171057926 6160745 complement(1329648..1330343) 1 NC_010524.1 KEGG: mpt:Mpe_A3040 predicted peptidase aspartic family; peptidase aspartic family 1330343 6160745 Lcho_1241 Leptothrix cholodnii SP-6 peptidase aspartic family YP_001790275.1 1329648 R 395495 CDS YP_001790276.1 171057927 6160746 complement(1330446..1330952) 1 NC_010524.1 PFAM: protein of unknown function DUF520; KEGG: mpt:Mpe_A3039 hypothetical protein; hypothetical protein 1330952 6160746 Lcho_1242 Leptothrix cholodnii SP-6 hypothetical protein YP_001790276.1 1330446 R 395495 CDS YP_001790277.1 171057928 6160747 1330961..1331995 1 NC_010524.1 KEGG: mpt:Mpe_A3038 UDP-N-acetylmuramate dehydrogenase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 1331995 6160747 Lcho_1243 Leptothrix cholodnii SP-6 UDP-N-acetylenolpyruvoylglucosamine reductase YP_001790277.1 1330961 D 395495 CDS YP_001790278.1 171057929 6163920 complement(1332021..1333250) 1 NC_010524.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: mpt:Mpe_A3528 putative lipoprotein; rare lipoprotein A 1333250 6163920 Lcho_1244 Leptothrix cholodnii SP-6 rare lipoprotein A YP_001790278.1 1332021 R 395495 CDS YP_001790279.1 171057930 6163921 complement(1333276..1334379) 1 NC_010524.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mpt:Mpe_A3689 GTN reductase; NADH:flavin oxidoreductase 1334379 6163921 Lcho_1245 Leptothrix cholodnii SP-6 NADH:flavin oxidoreductase YP_001790279.1 1333276 R 395495 CDS YP_001790280.1 171057931 6163922 complement(1334436..1335200) 1 NC_010524.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mpt:Mpe_A2071 endonuclease/exonuclease/phosphatase family protein; exodeoxyribonuclease III Xth 1335200 6163922 Lcho_1246 Leptothrix cholodnii SP-6 exodeoxyribonuclease III Xth YP_001790280.1 1334436 R 395495 CDS YP_001790281.1 171057932 6163923 complement(1335267..1335629) 1 NC_010524.1 KEGG: pna:Pnap_1322 hypothetical protein; hypothetical protein 1335629 6163923 Lcho_1247 Leptothrix cholodnii SP-6 hypothetical protein YP_001790281.1 1335267 R 395495 CDS YP_001790282.1 171057933 6163924 complement(1335681..1337162) 1 NC_010524.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: syd:Syncc9605_0708 deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photo-lyase 1337162 6163924 Lcho_1248 Leptothrix cholodnii SP-6 deoxyribodipyrimidine photo-lyase YP_001790282.1 1335681 R 395495 CDS YP_001790283.1 171057934 6163925 complement(1337194..1338456) 1 NC_010524.1 KEGG: syr:SynRCC307_2288 DNA photolyase FAD binding domain; deoxyribodipyrimidine photolyase-like protein 1338456 6163925 Lcho_1249 Leptothrix cholodnii SP-6 deoxyribodipyrimidine photolyase-like protein YP_001790283.1 1337194 R 395495 CDS YP_001790284.1 171057935 6161094 complement(1338459..1340000) 1 NC_010524.1 PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: mpt:Mpe_A2055 putative alpha-deoxyribodipyrimidine photolyase-related protein; deoxyribodipyrimidine photolyase-like protein 1340000 6161094 Lcho_1250 Leptothrix cholodnii SP-6 deoxyribodipyrimidine photolyase-like protein YP_001790284.1 1338459 R 395495 CDS YP_001790285.1 171057936 6161095 complement(1339993..1340160) 1 NC_010524.1 KEGG: mpt:Mpe_A2054 hypothetical protein; hypothetical protein 1340160 6161095 Lcho_1251 Leptothrix cholodnii SP-6 hypothetical protein YP_001790285.1 1339993 R 395495 CDS YP_001790286.1 171057937 6161096 complement(1340296..1340934) 1 NC_010524.1 PFAM: thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pnu:Pnuc_0780 methyltransferase type 11; type 11 methyltransferase 1340934 6161096 Lcho_1252 Leptothrix cholodnii SP-6 type 11 methyltransferase YP_001790286.1 1340296 R 395495 CDS YP_001790287.1 171057938 6161097 1341067..1341528 1 NC_010524.1 PFAM: Rhodanese domain protein; KEGG: mpt:Mpe_A3482 rhodanese-related sulfurtransferase-like protein; rhodanese domain-containing protein 1341528 6161097 Lcho_1253 Leptothrix cholodnii SP-6 rhodanese domain-containing protein YP_001790287.1 1341067 D 395495 CDS YP_001790288.1 171057939 6161098 1341543..1342286 1 NC_010524.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: aeh:Mlg_0631 cyclic nucleotide-binding protein; Crp/FNR family transcriptional regulator 1342286 6161098 Lcho_1254 Leptothrix cholodnii SP-6 Crp/FNR family transcriptional regulator YP_001790288.1 1341543 D 395495 CDS YP_001790289.1 171057940 6161099 1342359..1342862 1 NC_010524.1 KEGG: hch:HCH_00812 deoxyinosine 3'endonuclease (endonuclease V); deoxyinosine 3'endonuclease 1342862 6161099 Lcho_1255 Leptothrix cholodnii SP-6 deoxyinosine 3'endonuclease YP_001790289.1 1342359 D 395495 CDS YP_001790290.1 171057941 6162913 complement(1342900..1343466) 1 NC_010524.1 PFAM: protein of unknown function DUF98; hypothetical protein 1343466 6162913 Lcho_1256 Leptothrix cholodnii SP-6 hypothetical protein YP_001790290.1 1342900 R 395495 CDS YP_001790291.1 171057942 6162914 1343600..1344607 1 NC_010524.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: pna:Pnap_2839 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 1344607 6162914 Lcho_1257 Leptothrix cholodnii SP-6 cation diffusion facilitator family transporter YP_001790291.1 1343600 D 395495 CDS YP_001790292.1 171057943 6162915 1344905..1345873 1 NC_010524.1 KEGG: rfr:Rfer_0528 porin, gram-negative type; porin 1345873 6162915 Lcho_1258 Leptothrix cholodnii SP-6 porin YP_001790292.1 1344905 D 395495 CDS YP_001790293.1 171057944 6162916 complement(1345906..1346406) 1 NC_010524.1 PFAM: dihydrofolate reductase region; KEGG: mpt:Mpe_A2052 dihydrofolate reductase; dihydrofolate reductase 1346406 6162916 Lcho_1259 Leptothrix cholodnii SP-6 dihydrofolate reductase YP_001790293.1 1345906 R 395495 CDS YP_001790294.1 171057945 6162917 complement(1346403..1347251) 1 NC_010524.1 PFAM: thymidylate synthase; KEGG: ajs:Ajs_1197 thymidylate synthase; thymidylate synthase 1347251 6162917 Lcho_1260 Leptothrix cholodnii SP-6 thymidylate synthase YP_001790294.1 1346403 R 395495 CDS YP_001790295.1 171057946 6162918 complement(1347335..1347703) 1 NC_010524.1 PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ 1347703 6162918 Lcho_1261 Leptothrix cholodnii SP-6 type IV pilus assembly PilZ YP_001790295.1 1347335 R 395495 CDS YP_001790296.1 171057947 6162879 complement(1347700..1349505) 1 NC_010524.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_3238 ABC transporter related; ABC transporter-like protein 1349505 6162879 Lcho_1262 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001790296.1 1347700 R 395495 CDS YP_001790297.1 171057948 6162880 1349610..1350077 1 NC_010524.1 KEGG: mpt:Mpe_A1631 hypothetical protein; hypothetical protein 1350077 6162880 Lcho_1263 Leptothrix cholodnii SP-6 hypothetical protein YP_001790297.1 1349610 D 395495 CDS YP_001790298.1 171057949 6162881 1350197..1350598 1 NC_010524.1 KEGG: mpt:Mpe_A1632 multi-Cu oxidase; multi-Cu oxidase 1350598 6162881 Lcho_1264 Leptothrix cholodnii SP-6 multi-Cu oxidase YP_001790298.1 1350197 D 395495 CDS YP_001790299.1 171057950 6162882 1350588..1352033 1 NC_010524.1 PFAM: outer membrane efflux protein; KEGG: mpt:Mpe_A1633 putative copper resistance-related lipoprotein; outer membrane efflux protein 1352033 6162882 Lcho_1265 Leptothrix cholodnii SP-6 outer membrane efflux protein YP_001790299.1 1350588 D 395495 CDS YP_001790300.1 171057951 6162883 1352052..1353464 1 NC_010524.1 PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: pol:Bpro_3485 twin-arginine translocation pathway signal; multicopper oxidase type 3 1353464 6162883 Lcho_1266 Leptothrix cholodnii SP-6 multicopper oxidase type 3 YP_001790300.1 1352052 D 395495 CDS YP_001790301.1 171057952 6162884 1353493..1354008 1 NC_010524.1 PFAM: blue (type 1) copper domain protein; KEGG: eba:ebA1878 predicted multicopper oxidase; blue (type1) copper domain-containing protein 1354008 6162884 Lcho_1267 Leptothrix cholodnii SP-6 blue (type1) copper domain-containing protein YP_001790301.1 1353493 D 395495 CDS YP_001790302.1 171057953 6162627 1354005..1354514 1 NC_010524.1 PFAM: protein of unknown function DUF411; KEGG: mpt:Mpe_A0494 hypothetical protein; hypothetical protein 1354514 6162627 Lcho_1268 Leptothrix cholodnii SP-6 hypothetical protein YP_001790302.1 1354005 D 395495 CDS YP_001790303.1 171057954 6162628 complement(1354531..1355280) 1 NC_010524.1 KEGG: pst:PSPTO_5177 hypothetical protein; hypothetical protein 1355280 6162628 Lcho_1269 Leptothrix cholodnii SP-6 hypothetical protein YP_001790303.1 1354531 R 395495 CDS YP_001790304.1 171057955 6162629 complement(1355277..1355843) 1 NC_010524.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: psb:Psyr_0362 RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 factor 1355843 6162629 Lcho_1270 Leptothrix cholodnii SP-6 ECF subfamily RNA polymerase sigma-24 factor YP_001790304.1 1355277 R 395495 CDS YP_001790305.1 171057956 6162630 complement(1355895..1356479) 1 NC_010524.1 KEGG: dac:Daci_3806 hypothetical protein; hypothetical protein 1356479 6162630 Lcho_1271 Leptothrix cholodnii SP-6 hypothetical protein YP_001790305.1 1355895 R 395495 CDS YP_001790306.1 171057957 6162631 complement(1356601..1358247) 1 NC_010524.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_A1639 ABC peptide transporter, ATPase subunit; ABC transporter-like protein 1358247 6162631 Lcho_1272 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001790306.1 1356601 R 395495 CDS YP_001790307.1 171057958 6162632 complement(1358244..1359359) 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rme:Rmet_2144 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1359359 6162632 Lcho_1273 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001790307.1 1358244 R 395495 CDS YP_001790308.1 171057959 6162526 complement(1359356..1360393) 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_2974 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1360393 6162526 Lcho_1274 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001790308.1 1359356 R 395495 CDS YP_001790309.1 171057960 6162527 complement(1360418..1360840) 1 NC_010524.1 PFAM: protein of unknown function DUF86; KEGG: pna:Pnap_0134 protein of unknown function DUF86; hypothetical protein 1360840 6162527 Lcho_1275 Leptothrix cholodnii SP-6 hypothetical protein YP_001790309.1 1360418 R 395495 CDS YP_001790310.1 171057961 6162528 complement(1360833..1361222) 1 NC_010524.1 PFAM: DNA polymerase beta domain protein region; KEGG: ppd:Ppro_2946 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 1361222 6162528 Lcho_1276 Leptothrix cholodnii SP-6 DNA polymerase subunit beta YP_001790310.1 1360833 R 395495 CDS YP_001790311.1 171057962 6162529 complement(1361219..1363144) 1 NC_010524.1 PFAM: extracellular solute-binding protein family 5; KEGG: bam:Bamb_2094 extracellular solute-binding protein, family 5; extracellular solute-binding protein 1363144 6162529 Lcho_1277 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001790311.1 1361219 R 395495 CDS YP_001790312.1 171057963 6162530 complement(1363268..1363957) 1 NC_010524.1 KEGG: ypi:YpsIP31758_0091 hypothetical protein; hypothetical protein 1363957 6162530 Lcho_1278 Leptothrix cholodnii SP-6 hypothetical protein YP_001790312.1 1363268 R 395495 CDS YP_001790313.1 171057964 6162531 complement(1364049..1365278) 1 NC_010524.1 KEGG: mpt:Mpe_A2048 hypothetical protein; hypothetical protein 1365278 6162531 Lcho_1279 Leptothrix cholodnii SP-6 hypothetical protein YP_001790313.1 1364049 R 395495 CDS YP_001790314.1 171057965 6162171 complement(1365337..1365645) 1 NC_010524.1 hypothetical protein 1365645 6162171 Lcho_1280 Leptothrix cholodnii SP-6 hypothetical protein YP_001790314.1 1365337 R 395495 CDS YP_001790315.1 171057966 6162172 1365779..1366093 1 NC_010524.1 KEGG: mpt:Mpe_A0864 hypothetical protein; hypothetical protein 1366093 6162172 Lcho_1281 Leptothrix cholodnii SP-6 hypothetical protein YP_001790315.1 1365779 D 395495 CDS YP_001790316.1 171057967 6162173 complement(1366098..1368659) 1 NC_010524.1 PFAM: protein of unknown function DUF214; KEGG: mpt:Mpe_A2047 ABC transporter, permease protein; hypothetical protein 1368659 6162173 Lcho_1282 Leptothrix cholodnii SP-6 hypothetical protein YP_001790316.1 1366098 R 395495 CDS YP_001790317.1 171057968 6162174 complement(1368677..1369438) 1 NC_010524.1 PFAM: beta-lactamase domain protein; KEGG: ajs:Ajs_0715 beta-lactamase domain protein; beta-lactamase domain-containing protein 1369438 6162174 Lcho_1283 Leptothrix cholodnii SP-6 beta-lactamase domain-containing protein YP_001790317.1 1368677 R 395495 CDS YP_001790318.1 171057969 6162175 complement(1369548..1370243) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A2035 ABC transporter, ATP-binding protein; ABC transporter-like protein 1370243 6162175 Lcho_1284 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001790318.1 1369548 R 395495 CDS YP_001790319.1 171057970 6162176 complement(1370240..1371226) 1 NC_010524.1 KEGG: ajs:Ajs_3111 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 1371226 6162176 Lcho_1285 Leptothrix cholodnii SP-6 tRNA delta(2)-isopentenylpyrophosphate transferase YP_001790319.1 1370240 R 395495 CDS YP_001790320.1 171057971 6160385 complement(1371219..1372466) 1 NC_010524.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_3211 drug resistance transporter Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 1372466 6160385 Lcho_1286 Leptothrix cholodnii SP-6 Bcr/CflA subfamily drug resistance transporter YP_001790320.1 1371219 R 395495 CDS YP_001790321.1 171057972 6160386 1372610..1373035 1 NC_010524.1 KEGG: eba:ebB34 hypothetical protein; hypothetical protein 1373035 6160386 Lcho_1287 Leptothrix cholodnii SP-6 hypothetical protein YP_001790321.1 1372610 D 395495 CDS YP_001790322.1 171057973 6160387 1373039..1374031 1 NC_010524.1 KEGG: eba:ebA1117 hypothetical protein; hypothetical protein 1374031 6160387 Lcho_1288 Leptothrix cholodnii SP-6 hypothetical protein YP_001790322.1 1373039 D 395495 CDS YP_001790323.1 171057974 6160388 complement(1374066..1374497) 1 NC_010524.1 PFAM: Domain of unknown function DUF1841; KEGG: pol:Bpro_1226 hypothetical protein; hypothetical protein 1374497 6160388 Lcho_1289 Leptothrix cholodnii SP-6 hypothetical protein YP_001790323.1 1374066 R 395495 CDS YP_001790324.1 171057975 6160389 1374576..1375169 1 NC_010524.1 PFAM: nitroreductase; KEGG: xac:XAC0554 hypothetical protein; hypothetical protein 1375169 6160389 Lcho_1290 Leptothrix cholodnii SP-6 hypothetical protein YP_001790324.1 1374576 D 395495 CDS YP_001790325.1 171057976 6160390 1375169..1375927 1 NC_010524.1 PFAM: protein of unknown function DUF81; KEGG: mpt:Mpe_A1099 putative integral membrane protein; hypothetical protein 1375927 6160390 Lcho_1291 Leptothrix cholodnii SP-6 hypothetical protein YP_001790325.1 1375169 D 395495 CDS YP_001790326.1 171057977 6160904 1375961..1376752 1 NC_010524.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bpt:Bpet3275 conserved hypothetical protein, putative enoyl-CoA hydratase family member; enoyl-CoA hydratase/isomerase 1376752 6160904 Lcho_1292 Leptothrix cholodnii SP-6 enoyl-CoA hydratase/isomerase YP_001790326.1 1375961 D 395495 CDS YP_001790327.1 171057978 6160905 1376821..1378353 1 NC_010524.1 catalyzes the formation of malonyl-CoA from malonate and CoA; malonyl-CoA synthase 1378353 6160905 Lcho_1293 Leptothrix cholodnii SP-6 malonyl-CoA synthase YP_001790327.1 1376821 D 395495 CDS YP_001790328.1 171057979 6160906 1378496..1380223 1 NC_010524.1 KEGG: bpt:Bpet0639 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer 1380223 6160906 Lcho_1294 Leptothrix cholodnii SP-6 Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer YP_001790328.1 1378496 D 395495 CDS YP_001790329.1 171057980 6160907 1380245..1381951 1 NC_010524.1 KEGG: sse:Ssed_3337 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1381951 6160907 Lcho_1295 Leptothrix cholodnii SP-6 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001790329.1 1380245 D 395495 CDS YP_001790330.1 171057981 6160908 complement(1381964..1383781) 1 NC_010524.1 transport system that facilitates potassium-efflux; glutathione-regulated potassium-efflux system protein KefC 1383781 6160908 Lcho_1296 Leptothrix cholodnii SP-6 glutathione-regulated potassium-efflux system protein KefC YP_001790330.1 1381964 R 395495 CDS YP_001790331.1 171057982 6160909 complement(1383778..1384422) 1 NC_010524.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: pol:Bpro_1238 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) 1384422 6160909 Lcho_1297 Leptothrix cholodnii SP-6 NAD(P)H dehydrogenase (quinone) YP_001790331.1 1383778 R 395495 CDS YP_001790332.1 171057983 6163950 1384566..1385240 1 NC_010524.1 KEGG: mpt:Mpe_A1153 putative partition-related protein; putative partition-like protein 1385240 6163950 Lcho_1298 Leptothrix cholodnii SP-6 putative partition-like protein YP_001790332.1 1384566 D 395495 CDS YP_001790333.1 171057984 6163951 1385335..1386156 1 NC_010524.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpt:Mpe_A1151 two-component response regulator; two component LuxR family transcriptional regulator 1386156 6163951 Lcho_1299 Leptothrix cholodnii SP-6 two component LuxR family transcriptional regulator YP_001790333.1 1385335 D 395495 CDS YP_001790334.1 171057985 6163952 1386153..1387559 1 NC_010524.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A1150 signal transduction histidine kinase-like protein; histidine kinase 1387559 6163952 Lcho_1300 Leptothrix cholodnii SP-6 histidine kinase YP_001790334.1 1386153 D 395495 CDS YP_001790335.1 171057986 6163953 1387683..1388573 1 NC_010524.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 1388573 6163953 Lcho_1301 Leptothrix cholodnii SP-6 branched-chain amino acid aminotransferase YP_001790335.1 1387683 D 395495 CDS YP_001790336.1 171057987 6163954 1388595..1388801 1 NC_010524.1 KEGG: ajs:Ajs_0183 hypothetical protein; hypothetical protein 1388801 6163954 Lcho_1302 Leptothrix cholodnii SP-6 hypothetical protein YP_001790336.1 1388595 D 395495 CDS YP_001790337.1 171057988 6163955 1388924..1389811 1 NC_010524.1 TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; KEGG: mpt:Mpe_A3546 putative formyltetrahydrofolate deformylase protein; formyltetrahydrofolate deformylase 1389811 6163955 Lcho_1303 Leptothrix cholodnii SP-6 formyltetrahydrofolate deformylase YP_001790337.1 1388924 D 395495 CDS YP_001790338.1 171057989 6161003 1389852..1390268 1 NC_010524.1 KEGG: mpt:Mpe_A3545 hypothetical protein; hypothetical protein 1390268 6161003 Lcho_1304 Leptothrix cholodnii SP-6 hypothetical protein YP_001790338.1 1389852 D 395495 CDS YP_001790339.1 171057990 6161004 1390268..1391407 1 NC_010524.1 KEGG: mpt:Mpe_A3544 hypothetical protein; hypothetical protein 1391407 6161004 Lcho_1305 Leptothrix cholodnii SP-6 hypothetical protein YP_001790339.1 1390268 D 395495 CDS YP_001790340.1 171057991 6161005 1391400..1391960 1 NC_010524.1 KEGG: mpt:Mpe_A3543 hypothetical protein; hypothetical protein 1391960 6161005 Lcho_1306 Leptothrix cholodnii SP-6 hypothetical protein YP_001790340.1 1391400 D 395495 CDS YP_001790341.1 171057992 6161006 complement(1392051..1392575) 1 NC_010524.1 PFAM: cytochrome c class I; KEGG: mpt:Mpe_A3542 putative cytochrome; cytochrome c class I 1392575 6161006 Lcho_1307 Leptothrix cholodnii SP-6 cytochrome c class I YP_001790341.1 1392051 R 395495 CDS YP_001790342.1 171057993 6161008 1393306..1393950 1 NC_010524.1 PFAM: Fibronectin type III domain protein; fibronectin type III domain-containing protein 1393950 6161008 Lcho_1308 Leptothrix cholodnii SP-6 fibronectin type III domain-containing protein YP_001790342.1 1393306 D 395495 CDS YP_001790343.1 171057994 6163680 1394095..1396569 1 NC_010524.1 PFAM: helicase domain protein; type III restriction protein res subunit; protein of unknown function DUF450; EcoEI R domain protein; SMART: DEAD-like helicases; KEGG: ajs:Ajs_2618 EcoEI R, C-terminal domain protein; EcoEI R domain-containing protein 1396569 6163680 Lcho_1309 Leptothrix cholodnii SP-6 EcoEI R domain-containing protein YP_001790343.1 1394095 D 395495 CDS YP_001790344.1 171057995 6163681 1396599..1398068 1 NC_010524.1 PFAM: N-6 DNA methylase; KEGG: ajs:Ajs_2616 N-6 DNA methylase; N-6 DNA methylase 1398068 6163681 Lcho_1310 Leptothrix cholodnii SP-6 N-6 DNA methylase YP_001790344.1 1396599 D 395495 CDS YP_001790345.1 171057996 6163682 1398065..1399801 1 NC_010524.1 PFAM: restriction modification system DNA specificity domain; KEGG: vei:Veis_1015 restriction modification system DNA specificity domain; restriction modification system DNA specificity subunit 1399801 6163682 Lcho_1311 Leptothrix cholodnii SP-6 restriction modification system DNA specificity subunit YP_001790345.1 1398065 D 395495 CDS YP_001790346.1 171057997 6163683 1399805..1399948 1 NC_010524.1 hypothetical protein 1399948 6163683 Lcho_1312 Leptothrix cholodnii SP-6 hypothetical protein YP_001790346.1 1399805 D 395495 CDS YP_001790347.1 171057998 6163684 1399986..1401200 1 NC_010524.1 KEGG: vvy:VV1909 hypothetical protein; hypothetical protein 1401200 6163684 Lcho_1313 Leptothrix cholodnii SP-6 hypothetical protein YP_001790347.1 1399986 D 395495 CDS YP_001790348.1 171057999 6163434 1401211..1402113 1 NC_010524.1 KEGG: vei:Veis_3011 hypothetical protein; hypothetical protein 1402113 6163434 Lcho_1314 Leptothrix cholodnii SP-6 hypothetical protein YP_001790348.1 1401211 D 395495 CDS YP_001790349.1 171058000 6163436 1403144..1404106 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: azo:azo1638 hypothetical protein; hypothetical protein 1404106 6163436 Lcho_1316 Leptothrix cholodnii SP-6 hypothetical protein YP_001790349.1 1403144 D 395495 CDS YP_001790350.1 171058001 6163437 complement(1404117..1405151) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azo:azo1636 HTH-type transcriptional regulator; LysR family transcriptional regulator 1405151 6163437 Lcho_1317 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001790350.1 1404117 R 395495 CDS YP_001790351.1 171058002 6163438 1405169..1406260 1 NC_010524.1 PFAM: O-methyltransferase family 2; Methyltransferase type 12; KEGG: mgi:Mflv_3940 O-methyltransferase, family 2; O-methyltransferase family protein 1406260 6163438 Lcho_1318 Leptothrix cholodnii SP-6 O-methyltransferase family protein YP_001790351.1 1405169 D 395495 CDS YP_001790352.1 171058003 6163439 complement(1406250..1406738) 1 NC_010524.1 KEGG: tbd:Tbd_0094 hypothetical protein; hypothetical protein 1406738 6163439 Lcho_1319 Leptothrix cholodnii SP-6 hypothetical protein YP_001790352.1 1406250 R 395495 CDS YP_001790353.1 171058004 6163052 1406803..1407462 1 NC_010524.1 hypothetical protein 1407462 6163052 Lcho_1320 Leptothrix cholodnii SP-6 hypothetical protein YP_001790353.1 1406803 D 395495 CDS YP_001790354.1 171058005 6163053 complement(1407339..1408616) 1 NC_010524.1 PFAM: cytochrome c class I; KEGG: mpt:Mpe_A0755 putative alcohol dehydrogenase cytochrome c subunit precursor; gluconate 2-dehydrogenase 1408616 6163053 Lcho_1321 Leptothrix cholodnii SP-6 gluconate 2-dehydrogenase YP_001790354.1 1407339 R 395495 CDS YP_001790355.1 171058006 6163054 complement(1408613..1409332) 1 NC_010524.1 KEGG: pna:Pnap_1283 putative cytochrome c; putative cytochrome c 1409332 6163054 Lcho_1322 Leptothrix cholodnii SP-6 putative cytochrome c YP_001790355.1 1408613 R 395495 CDS YP_001790356.1 171058007 6163055 1409545..1410903 1 NC_010524.1 PFAM: permease; KEGG: eba:ebA6443 predicted permease; permease 1410903 6163055 Lcho_1323 Leptothrix cholodnii SP-6 permease YP_001790356.1 1409545 D 395495 CDS YP_001790357.1 171058008 6163056 1410927..1411163 1 NC_010524.1 TIGRFAM: redox-active disulfide protein 2; KEGG: eba:ebA6442 hypothetical protein; redox-active disulfide protein 2 1411163 6163056 Lcho_1324 Leptothrix cholodnii SP-6 redox-active disulfide protein 2 YP_001790357.1 1410927 D 395495 CDS YP_001790358.1 171058009 6163057 1411230..1411595 1 NC_010524.1 PFAM: LrgA family protein; KEGG: pol:Bpro_0432 LrgA; LrgA family protein 1411595 6163057 Lcho_1325 Leptothrix cholodnii SP-6 LrgA family protein YP_001790358.1 1411230 D 395495 CDS YP_001790359.1 171058010 6163020 1411588..1412304 1 NC_010524.1 PFAM: LrgB family protein; KEGG: pol:Bpro_0431 LrgB-like protein; LrgB family protein 1412304 6163020 Lcho_1326 Leptothrix cholodnii SP-6 LrgB family protein YP_001790359.1 1411588 D 395495 CDS YP_001790360.1 171058011 6163021 1412327..1413292 1 NC_010524.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; KEGG: bpt:Bpet2096 flagellar-specific RNA polymerase sigma factor; FliA/WhiG family RNA polymerase sigma 28 subunit 1413292 6163021 Lcho_1327 Leptothrix cholodnii SP-6 FliA/WhiG family RNA polymerase sigma 28 subunit YP_001790360.1 1412327 D 395495 CDS YP_001790361.1 171058012 6163022 complement(1413321..1414025) 1 NC_010524.1 hypothetical protein 1414025 6163022 Lcho_1328 Leptothrix cholodnii SP-6 hypothetical protein YP_001790361.1 1413321 R 395495 CDS YP_001790362.1 171058013 6163023 complement(1414028..1414558) 1 NC_010524.1 KEGG: gme:Gmet_1448 hypothetical protein; hypothetical protein 1414558 6163023 Lcho_1329 Leptothrix cholodnii SP-6 hypothetical protein YP_001790362.1 1414028 R 395495 CDS YP_001790363.1 171058014 6163024 complement(1414534..1416444) 1 NC_010524.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Ig domain protein group 2 domain protein; Ig domain protein group 1 domain protein; KEGG: ttj:TTHA1868 extracellular serine protease; peptidase S8/S53 subtilisin kexin sedolisin 1416444 6163024 Lcho_1330 Leptothrix cholodnii SP-6 peptidase S8/S53 subtilisin kexin sedolisin YP_001790363.1 1414534 R 395495 CDS YP_001790364.1 171058015 6163025 complement(1416511..1417836) 1 NC_010524.1 PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pol:Bpro_2122 TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP C4-dicarboxylate transport system permease DctM 1417836 6163025 Lcho_1331 Leptothrix cholodnii SP-6 TRAP C4-dicarboxylate transport system permease DctM YP_001790364.1 1416511 R 395495 CDS YP_001790365.1 171058016 6162738 complement(1417833..1418330) 1 NC_010524.1 KEGG: psa:PST_1663 hypothetical protein; hypothetical protein 1418330 6162738 Lcho_1332 Leptothrix cholodnii SP-6 hypothetical protein YP_001790365.1 1417833 R 395495 CDS YP_001790366.1 171058017 6162739 complement(1418429..1419460) 1 NC_010524.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: azo:azo3677 putative C4-dicarboxylate-binding periplasmic protein; TRAP C4-dicarboxylate transport system permease subunit DctP 1419460 6162739 Lcho_1333 Leptothrix cholodnii SP-6 TRAP C4-dicarboxylate transport system permease subunit DctP YP_001790366.1 1418429 R 395495 CDS YP_001790367.1 171058018 6162740 complement(1419568..1420536) 1 NC_010524.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pna:Pnap_2724 ferredoxin; phthalate 4,5-dioxygenase 1420536 6162740 Lcho_1334 Leptothrix cholodnii SP-6 phthalate 4,5-dioxygenase YP_001790367.1 1419568 R 395495 CDS YP_001790368.1 171058019 6162741 complement(1420533..1421588) 1 NC_010524.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bvi:Bcep1808_3498 vanillate monooxygenase; Rieske (2Fe-2S) domain-containing protein 1421588 6162741 Lcho_1335 Leptothrix cholodnii SP-6 Rieske (2Fe-2S) domain-containing protein YP_001790368.1 1420533 R 395495 CDS YP_001790369.1 171058020 6162742 1421662..1422402 1 NC_010524.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: csa:Csal_0345 transcriptional regulator, GntR family; GntR family transcriptional regulator 1422402 6162742 Lcho_1336 Leptothrix cholodnii SP-6 GntR family transcriptional regulator YP_001790369.1 1421662 D 395495 CDS YP_001790370.1 171058021 6162743 1422659..1423009 1 NC_010524.1 PFAM: cytochrome c class I; KEGG: rfr:Rfer_4077 cytochrome c, class I; cytochrome c class I 1423009 6162743 Lcho_1337 Leptothrix cholodnii SP-6 cytochrome c class I YP_001790370.1 1422659 D 395495 CDS YP_001790371.1 171058022 6160324 1423044..1423652 1 NC_010524.1 PFAM: NapC/NirT cytochrome c domain protein; KEGG: bpt:Bpet4055 cytochrome c-type protein; NapC/NirT cytochrome c domain-containing protein 1423652 6160324 Lcho_1338 Leptothrix cholodnii SP-6 NapC/NirT cytochrome c domain-containing protein YP_001790371.1 1423044 D 395495 CDS YP_001790372.1 171058023 6160325 complement(1423663..1424364) 1 NC_010524.1 PFAM: NapC/NirT cytochrome c domain protein; KEGG: azo:azo3938 probable cytochrome c-type protein NapC; NapC/NirT cytochrome c domain-containing protein 1424364 6160325 Lcho_1339 Leptothrix cholodnii SP-6 NapC/NirT cytochrome c domain-containing protein YP_001790372.1 1423663 R 395495 CDS YP_001790373.1 171058024 6160326 complement(1424386..1424871) 1 NC_010524.1 PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: azo:azo3939 probable diheme cytochrome c; nitrate reductase cytochrome c-type subunit NapB 1424871 6160326 Lcho_1340 Leptothrix cholodnii SP-6 nitrate reductase cytochrome c-type subunit NapB YP_001790373.1 1424386 R 395495 CDS YP_001790374.1 171058025 6160327 complement(1424871..1425716) 1 NC_010524.1 TIGRFAM: ferredoxin-type protein, NapH/MauN family; KEGG: dsh:Dshi_3163 ferredoxin-type protein, NapH/MauN family; NapH/MauN family ferredoxin-type protein 1425716 6160327 Lcho_1341 Leptothrix cholodnii SP-6 NapH/MauN family ferredoxin-type protein YP_001790374.1 1424871 R 395495 CDS YP_001790375.1 171058026 6160328 complement(1425713..1426432) 1 NC_010524.1 TIGRFAM: MauM/NapG family ferredoxin-type protein; KEGG: rsq:Rsph17025_3221 hypothetical protein; MauM/NapG family ferredoxin-type protein 1426432 6160328 Lcho_1342 Leptothrix cholodnii SP-6 MauM/NapG family ferredoxin-type protein YP_001790375.1 1425713 R 395495 CDS YP_001790376.1 171058027 6160329 complement(1426452..1429007) 1 NC_010524.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 1429007 6160329 Lcho_1343 Leptothrix cholodnii SP-6 nitrate reductase catalytic subunit YP_001790376.1 1426452 R 395495 CDS YP_001790377.1 171058028 6161369 complement(1429171..1429506) 1 NC_010524.1 hypothetical protein 1429506 6161369 Lcho_1344 Leptothrix cholodnii SP-6 hypothetical protein YP_001790377.1 1429171 R 395495 CDS YP_001790378.1 171058029 6161370 1429833..1431284 1 NC_010524.1 KEGG: pna:Pnap_2325 nitrogenase MoFe cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase MoFe cofactor biosynthesis protein NifE 1431284 6161370 Lcho_1345 Leptothrix cholodnii SP-6 nitrogenase MoFe cofactor biosynthesis protein NifE YP_001790378.1 1429833 D 395495 CDS YP_001790379.1 171058030 6161371 complement(1431288..1433984) 1 NC_010524.1 KEGG: tbd:Tbd_1456 putative diguanylate cyclase/phosphodiesterase (GGDEF and EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1433984 6161371 Lcho_1346 Leptothrix cholodnii SP-6 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001790379.1 1431288 R 395495 CDS YP_001790380.1 171058031 6161372 complement(1434024..1434485) 1 NC_010524.1 TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: dar:Daro_2890 peptidase M52, hydrogen uptake protein; hydrogenase maturation protease 1434485 6161372 Lcho_1347 Leptothrix cholodnii SP-6 hydrogenase maturation protease YP_001790380.1 1434024 R 395495 CDS YP_001790381.1 171058032 6161373 complement(1434494..1436023) 1 NC_010524.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: dar:Daro_2889 nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase large subunit 1436023 6161373 Lcho_1348 Leptothrix cholodnii SP-6 nickel-dependent hydrogenase large subunit YP_001790381.1 1434494 R 395495 CDS YP_001790382.1 171058033 6161374 complement(1436046..1436987) 1 NC_010524.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: dar:Daro_2888 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 1436987 6161374 Lcho_1349 Leptothrix cholodnii SP-6 NADH ubiquinone oxidoreductase 20 kDa subunit YP_001790382.1 1436046 R 395495 CDS YP_001790383.1 171058034 6161325 1437293..1438666 1 NC_010524.1 KEGG: pna:Pnap_2324 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 1438666 6161325 Lcho_1350 Leptothrix cholodnii SP-6 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN YP_001790383.1 1437293 D 395495 CDS YP_001790384.1 171058035 6161326 1438701..1439132 1 NC_010524.1 TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: bbt:BBta_5920 nitrogenase molybdenum-iron protein NifX; nitrogen fixation protein NifX 1439132 6161326 Lcho_1351 Leptothrix cholodnii SP-6 nitrogen fixation protein NifX YP_001790384.1 1438701 D 395495 CDS YP_001790385.1 171058036 6161327 1439129..1439608 1 NC_010524.1 TIGRFAM: nitrogen fixation protein; PFAM: protein of unknown function DUF269; KEGG: bxe:Bxe_B1473 hypothetical protein; nitrogen fixation protein 1439608 6161327 Lcho_1352 Leptothrix cholodnii SP-6 nitrogen fixation protein YP_001790385.1 1439129 D 395495 CDS YP_001790386.1 171058037 6161328 1439629..1439829 1 NC_010524.1 PFAM: protein of unknown function DUF683; KEGG: pna:Pnap_2321 protein of unknown function DUF683; hypothetical protein 1439829 6161328 Lcho_1353 Leptothrix cholodnii SP-6 hypothetical protein YP_001790386.1 1439629 D 395495 CDS YP_001790387.1 171058038 6161329 1439849..1440157 1 NC_010524.1 TIGRFAM: ferredoxin III, nif-specific; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bvi:Bcep1808_6025 4Fe-4S ferredoxin, iron-sulfur binding domain protein; ferredoxin III 1440157 6161329 Lcho_1354 Leptothrix cholodnii SP-6 ferredoxin III YP_001790387.1 1439849 D 395495 CDS YP_001790388.1 171058039 6161330 1440169..1440843 1 NC_010524.1 PFAM: NifQ family protein; KEGG: bxe:Bxe_B1476 putative nitrogen fixation-related protein(NifQ); NifQ family protein 1440843 6161330 Lcho_1355 Leptothrix cholodnii SP-6 NifQ family protein YP_001790388.1 1440169 D 395495 CDS YP_001790389.1 171058040 6159955 1440897..1441658 1 NC_010524.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_2888 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 1441658 6159955 Lcho_1356 Leptothrix cholodnii SP-6 molybdenum ABC transporter periplasmic molybdate-binding protein YP_001790389.1 1440897 D 395495 CDS YP_001790390.1 171058041 6159956 1441662..1442360 1 NC_010524.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB0824 molybdenum transport system permease protein; molybdate ABC transporter inner membrane subunit 1442360 6159956 Lcho_1357 Leptothrix cholodnii SP-6 molybdate ABC transporter inner membrane subunit YP_001790390.1 1441662 D 395495 CDS YP_001790391.1 171058042 6159957 1442344..1443468 1 NC_010524.1 KEGG: eba:ebA2719 molybdenum import ATP-binding protein; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; molybdate ABC transporter ATPase 1443468 6159957 Lcho_1358 Leptothrix cholodnii SP-6 molybdate ABC transporter ATPase YP_001790391.1 1442344 D 395495 CDS YP_001790392.1 171058043 6159958 complement(1443471..1443713) 1 NC_010524.1 KEGG: mpt:Mpe_A2174 hypothetical protein; hypothetical protein 1443713 6159958 Lcho_1359 Leptothrix cholodnii SP-6 hypothetical protein YP_001790392.1 1443471 R 395495 CDS YP_001790393.1 171058044 6159959 1444099..1445325 1 NC_010524.1 TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mpt:Mpe_A2262 cysteine desulfurase; cysteine desulfurase IscS 1445325 6159959 Lcho_1360 Leptothrix cholodnii SP-6 cysteine desulfurase IscS YP_001790393.1 1444099 D 395495 CDS YP_001790394.1 171058045 6159960 1445380..1445808 1 NC_010524.1 TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: mpt:Mpe_A2261 (Fe-S) cluster formation/repair protein; FeS cluster assembly scaffold IscU 1445808 6159960 Lcho_1361 Leptothrix cholodnii SP-6 FeS cluster assembly scaffold IscU YP_001790394.1 1445380 D 395495 CDS YP_001790395.1 171058046 6159961 1445860..1446279 1 NC_010524.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: cvi:CV_3694 hypothetical protein; iron-sulfur cluster assembly accessory protein 1446279 6159961 Lcho_1362 Leptothrix cholodnii SP-6 iron-sulfur cluster assembly accessory protein YP_001790395.1 1445860 D 395495 CDS YP_001790396.1 171058047 6159769 1446293..1446616 1 NC_010524.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: bvi:Bcep1808_5990 iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly accessory protein 1446616 6159769 Lcho_1363 Leptothrix cholodnii SP-6 iron-sulfur cluster assembly accessory protein YP_001790396.1 1446293 D 395495 CDS YP_001790397.1 171058048 6159770 1446635..1448545 1 NC_010524.1 KEGG: mfa:Mfla_0804 Fe-S protein assembly chaperone HscA; TIGRFAM: Fe-S protein assembly chaperone HscA; PFAM: Heat shock protein 70; Fe-S protein assembly chaperone HscA 1448545 6159770 Lcho_1364 Leptothrix cholodnii SP-6 Fe-S protein assembly chaperone HscA YP_001790397.1 1446635 D 395495 CDS YP_001790398.1 171058049 6159771 1448578..1448961 1 NC_010524.1 TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: pna:Pnap_1564 ferredoxin, 2Fe-2S type, ISC system; ferredoxin, 2Fe-2S type, ISC system 1448961 6159771 Lcho_1365 Leptothrix cholodnii SP-6 ferredoxin, 2Fe-2S type, ISC system YP_001790398.1 1448578 D 395495 CDS YP_001790399.1 171058050 6159772 1449189..1450343 1 NC_010524.1 TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase; KEGG: pna:Pnap_2310 homocitrate synthase; homocitrate synthase 1450343 6159772 Lcho_1366 Leptothrix cholodnii SP-6 homocitrate synthase YP_001790399.1 1449189 D 395495 CDS YP_001790400.1 171058051 6159773 1450385..1450750 1 NC_010524.1 PFAM: nitrogen fixation protein NifW; KEGG: pna:Pnap_2312 nitrogen fixation protein NifW; nitrogen fixation protein NifW 1450750 6159773 Lcho_1367 Leptothrix cholodnii SP-6 nitrogen fixation protein NifW YP_001790400.1 1450385 D 395495 CDS YP_001790401.1 171058052 6159774 1450797..1451648 1 NC_010524.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bxe:Bxe_B1436 electron transfer flavoprotein, fix A (beta subunit); electron transfer flavoprotein alpha/beta-subunit 1451648 6159774 Lcho_1368 Leptothrix cholodnii SP-6 electron transfer flavoprotein alpha/beta-subunit YP_001790401.1 1450797 D 395495 CDS YP_001790402.1 171058053 6159987 1451678..1452802 1 NC_010524.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: bxe:Bxe_B1435 electron transfer flavoprotein FixB (alpha subunit); electron transfer flavoprotein alpha/beta-subunit 1452802 6159987 Lcho_1369 Leptothrix cholodnii SP-6 electron transfer flavoprotein alpha/beta-subunit YP_001790402.1 1451678 D 395495 CDS YP_001790403.1 171058054 6159988 1452821..1454125 1 NC_010524.1 PFAM: monooxygenase FAD-binding; HI0933 family protein; FAD dependent oxidoreductase; KEGG: pna:Pnap_2315 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 1454125 6159988 Lcho_1370 Leptothrix cholodnii SP-6 electron-transferring-flavoprotein dehydrogenase YP_001790403.1 1452821 D 395495 CDS YP_001790404.1 171058055 6159989 1454122..1454418 1 NC_010524.1 KEGG: bvi:Bcep1808_5981 putative ferredoxin like protein; FixX; putative ferredoxin-like protein FixX 1454418 6159989 Lcho_1371 Leptothrix cholodnii SP-6 putative ferredoxin-like protein FixX YP_001790404.1 1454122 D 395495 CDS YP_001790405.1 171058056 6159990 1454682..1456463 1 NC_010524.1 KEGG: pna:Pnap_1570 transcriptional regulator, NifA, fis family; TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; transcriptional regulator NifA 1456463 6159990 Lcho_1372 Leptothrix cholodnii SP-6 transcriptional regulator NifA YP_001790405.1 1454682 D 395495 CDS YP_001790406.1 171058057 6159991 1456593..1457390 1 NC_010524.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: eba:ebA3019 phosphate regulon transcriptional regulatory protein PhoB; two component transcriptional regulator 1457390 6159991 Lcho_1373 Leptothrix cholodnii SP-6 two component transcriptional regulator YP_001790406.1 1456593 D 395495 CDS YP_001790407.1 171058058 6159992 1457425..1458228 1 NC_010524.1 PFAM: regulatory protein LuxR; KEGG: nmu:Nmul_A2579 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 1458228 6159992 Lcho_1374 Leptothrix cholodnii SP-6 LuxR family transcriptional regulator YP_001790407.1 1457425 D 395495 CDS YP_001790408.1 171058059 6159757 complement(1458232..1458888) 1 NC_010524.1 KEGG: nmc:NMC0423 probable insertion element IS1016 transposase; putative insertion element IS1016 transposase 1458888 6159757 Lcho_1375 Leptothrix cholodnii SP-6 putative insertion element IS1016 transposase YP_001790408.1 1458232 R 395495 CDS YP_001790409.1 171058060 6159758 1459090..1460487 1 NC_010524.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: mms:mma_0633 exopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 1460487 6159758 Lcho_1376 Leptothrix cholodnii SP-6 lipopolysaccharide biosynthesis protein YP_001790409.1 1459090 D 395495 CDS YP_001790410.1 171058061 6159759 1460509..1461411 1 NC_010524.1 TIGRFAM: capsular exopolysaccharide family; KEGG: mms:mma_0634 mrp-like protein; exopolysaccharide tyrosine-protein kinase 1461411 6159759 Lcho_1377 Leptothrix cholodnii SP-6 exopolysaccharide tyrosine-protein kinase YP_001790410.1 1460509 D 395495 CDS YP_001790411.1 171058062 6159760 1461883..1463175 1 NC_010524.1 PFAM: Fibronectin type III domain protein; KEGG: ret:RHE_CH01068 hypothetical protein; fibronectin type III domain-containing protein 1463175 6159760 Lcho_1378 Leptothrix cholodnii SP-6 fibronectin type III domain-containing protein YP_001790411.1 1461883 D 395495 CDS YP_001790412.1 171058063 6159761 1463222..1464553 1 NC_010524.1 hypothetical protein 1464553 6159761 Lcho_1379 Leptothrix cholodnii SP-6 hypothetical protein YP_001790412.1 1463222 D 395495 CDS YP_001790413.1 171058064 6159762 complement(1464518..1465315) 1 NC_010524.1 KEGG: mst:Msp_0062 hypothetical protein; hypothetical protein 1465315 6159762 Lcho_1380 Leptothrix cholodnii SP-6 hypothetical protein YP_001790413.1 1464518 R 395495 CDS YP_001790414.1 171058065 6159836 complement(1465329..1466309) 1 NC_010524.1 PFAM: glycosyl transferase family 2; KEGG: dde:Dde_0844 glycosyltransferase involved in cell wall biogenesis-like; glycosyl transferase family protein 1466309 6159836 Lcho_1381 Leptothrix cholodnii SP-6 glycosyl transferase family protein YP_001790414.1 1465329 R 395495 CDS YP_001790415.1 171058066 6159837 complement(1466327..1467277) 1 NC_010524.1 PFAM: glycosyl transferase family 8; KEGG: lsa:LSA1474 putative bifunctional glycosyl transferase, family 8; glycosyl transferase family protein 1467277 6159837 Lcho_1382 Leptothrix cholodnii SP-6 glycosyl transferase family protein YP_001790415.1 1466327 R 395495 CDS YP_001790416.1 171058067 6159838 complement(1467294..1468313) 1 NC_010524.1 PFAM: glycosyl transferase family 2; KEGG: smd:Smed_4802 glycosyl transferase family 2; glycosyl transferase family protein 1468313 6159838 Lcho_1383 Leptothrix cholodnii SP-6 glycosyl transferase family protein YP_001790416.1 1467294 R 395495 CDS YP_001790417.1 171058068 6159839 complement(1468310..1469644) 1 NC_010524.1 KEGG: nar:Saro_3228 hypothetical protein; hypothetical protein 1469644 6159839 Lcho_1384 Leptothrix cholodnii SP-6 hypothetical protein YP_001790417.1 1468310 R 395495 CDS YP_001790418.1 171058069 6159840 complement(1469641..1470771) 1 NC_010524.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: ade:Adeh_4176 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 1470771 6159840 Lcho_1385 Leptothrix cholodnii SP-6 UDP-N-acetylglucosamine 2-epimerase YP_001790418.1 1469641 R 395495 CDS YP_001790419.1 171058070 6159841 complement(1470768..1471976) 1 NC_010524.1 KEGG: aeh:Mlg_0113 hypothetical protein; hypothetical protein 1471976 6159841 Lcho_1386 Leptothrix cholodnii SP-6 hypothetical protein YP_001790419.1 1470768 R 395495 CDS YP_001790420.1 171058071 6160301 complement(1472005..1472676) 1 NC_010524.1 PFAM: Methyltransferase type 11; KEGG: rpd:RPD_3889 methyltransferase type 11; type 11 methyltransferase 1472676 6160301 Lcho_1387 Leptothrix cholodnii SP-6 type 11 methyltransferase YP_001790420.1 1472005 R 395495 CDS YP_001790421.1 171058072 6160302 complement(1472673..1473647) 1 NC_010524.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4265 glycosyl transferase, family 2; glycosyl transferase family protein 1473647 6160302 Lcho_1388 Leptothrix cholodnii SP-6 glycosyl transferase family protein YP_001790421.1 1472673 R 395495 CDS YP_001790422.1 171058073 6160303 complement(1473659..1475536) 1 NC_010524.1 KEGG: hau:Haur_3584 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; asparagine synthase 1475536 6160303 Lcho_1389 Leptothrix cholodnii SP-6 asparagine synthase YP_001790422.1 1473659 R 395495 CDS YP_001790423.1 171058074 6160304 complement(1475511..1476419) 1 NC_010524.1 PFAM: glycosyl transferase family 2; KEGG: sfu:Sfum_0967 glycosyl transferase, family 2; glycosyl transferase family protein 1476419 6160304 Lcho_1390 Leptothrix cholodnii SP-6 glycosyl transferase family protein YP_001790423.1 1475511 R 395495 CDS YP_001790424.1 171058075 6160305 complement(1476416..1477501) 1 NC_010524.1 KEGG: pgi:PG0114 hypothetical protein; hypothetical protein 1477501 6160305 Lcho_1391 Leptothrix cholodnii SP-6 hypothetical protein YP_001790424.1 1476416 R 395495 CDS YP_001790425.1 171058076 6160306 complement(1477502..1480084) 1 NC_010524.1 PFAM: polysaccharide biosynthesis protein; protein of unknown function DUF354; KEGG: smd:Smed_4810 polysaccharide biosynthesis protein; hypothetical protein 1480084 6160306 Lcho_1392 Leptothrix cholodnii SP-6 hypothetical protein YP_001790425.1 1477502 R 395495 CDS YP_001790426.1 171058077 6159918 complement(1480100..1481278) 1 NC_010524.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ret:RHE_CH01368 probable aminotransferase protein (involved in cell wall biogenesis); glutamine--scyllo-inositol transaminase 1481278 6159918 Lcho_1393 Leptothrix cholodnii SP-6 glutamine--scyllo-inositol transaminase YP_001790426.1 1480100 R 395495 CDS YP_001790427.1 171058078 6159919 complement(1481275..1482252) 1 NC_010524.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: art:Arth_4059 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1482252 6159919 Lcho_1394 Leptothrix cholodnii SP-6 NAD-dependent epimerase/dehydratase YP_001790427.1 1481275 R 395495 CDS YP_001790428.1 171058079 6159920 complement(1482283..1483494) 1 NC_010524.1 PFAM: sugar transferase; KEGG: sfu:Sfum_0975 undecaprenyl-phosphate galactose phosphotransferase; undecaprenyl-phosphate galactose phosphotransferase 1483494 6159920 Lcho_1395 Leptothrix cholodnii SP-6 undecaprenyl-phosphate galactose phosphotransferase YP_001790428.1 1482283 R 395495 CDS YP_001790429.1 171058080 6159921 1483684..1484163 1 NC_010524.1 KEGG: mag:amb0106 acetyltransferase; acetyltransferase 1484163 6159921 Lcho_1396 Leptothrix cholodnii SP-6 acetyltransferase YP_001790429.1 1483684 D 395495 CDS YP_001790430.1 171058081 6159922 1484182..1485240 1 NC_010524.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: nha:Nham_3041 oxidoreductase-like; oxidoreductase domain-containing protein 1485240 6159922 Lcho_1397 Leptothrix cholodnii SP-6 oxidoreductase domain-containing protein YP_001790430.1 1484182 D 395495 CDS YP_001790431.1 171058082 6159923 1485237..1486499 1 NC_010524.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cau:Caur_1631 glutamine--scyllo-inositol transaminase; glutamine--scyllo-inositol transaminase 1486499 6159923 Lcho_1398 Leptothrix cholodnii SP-6 glutamine--scyllo-inositol transaminase YP_001790431.1 1485237 D 395495 CDS YP_001790432.1 171058083 6160020 complement(1486354..1487406) 1 NC_010524.1 KEGG: amr:AM1_5765 hypothetical protein; hypothetical protein 1487406 6160020 Lcho_1399 Leptothrix cholodnii SP-6 hypothetical protein YP_001790432.1 1486354 R 395495 CDS YP_001790433.1 171058084 6160021 1487765..1488382 1 NC_010524.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: sat:SYN_01953 response regulator with a HTH DNA-binding domain; two component LuxR family transcriptional regulator 1488382 6160021 Lcho_1400 Leptothrix cholodnii SP-6 two component LuxR family transcriptional regulator YP_001790433.1 1487765 D 395495 CDS YP_001790434.1 171058085 6160022 1488505..1489659 1 NC_010524.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: dar:Daro_1573 response regulator receiver:ATP-binding region, ATPase-like:histidine kinase, dimerization and phosphoacceptor region; response regulator receiver sensor signal transduction histidine kinase 1489659 6160022 Lcho_1401 Leptothrix cholodnii SP-6 response regulator receiver sensor signal transduction histidine kinase YP_001790434.1 1488505 D 395495 CDS YP_001790435.1 171058086 6160023 1489656..1490291 1 NC_010524.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rso:RSc0292 response regulator transcription regulator protein; two component LuxR family transcriptional regulator 1490291 6160023 Lcho_1402 Leptothrix cholodnii SP-6 two component LuxR family transcriptional regulator YP_001790435.1 1489656 D 395495 CDS YP_001790436.1 171058087 6160024 complement(1490276..1491091) 1 NC_010524.1 KEGG: rme:Rmet_5178 hypothetical protein; hypothetical protein 1491091 6160024 Lcho_1403 Leptothrix cholodnii SP-6 hypothetical protein YP_001790436.1 1490276 R 395495 CDS YP_001790437.1 171058088 6160025 1491299..1492888 1 NC_010524.1 TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; KEGG: bvi:Bcep1808_5994 nitrogenase cofactor biosynthesis protein NifB; nitrogenase cofactor biosynthesis protein NifB 1492888 6160025 Lcho_1404 Leptothrix cholodnii SP-6 nitrogenase cofactor biosynthesis protein NifB YP_001790437.1 1491299 D 395495 CDS YP_001790438.1 171058089 6159924 1492933..1493127 1 NC_010524.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bvi:Bcep1808_5995 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1493127 6159924 Lcho_1405 Leptothrix cholodnii SP-6 4Fe-4S ferredoxin YP_001790438.1 1492933 D 395495 CDS YP_001790439.1 171058090 6159925 1493136..1493540 1 NC_010524.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: bxe:Bxe_B1447 HesB/YadR/YfhF; iron-sulfur cluster assembly accessory protein 1493540 6159925 Lcho_1406 Leptothrix cholodnii SP-6 iron-sulfur cluster assembly accessory protein YP_001790439.1 1493136 D 395495 CDS YP_001790440.1 171058091 6159926 1493565..1494215 1 NC_010524.1 KEGG: pna:Pnap_1577 hypothetical protein; hypothetical protein 1494215 6159926 Lcho_1407 Leptothrix cholodnii SP-6 hypothetical protein YP_001790440.1 1493565 D 395495 CDS YP_001790441.1 171058092 6159927 1494215..1495027 1 NC_010524.1 PFAM: leucine rich repeat variant; LRV FeS4 cluster domain protein; KEGG: bxe:Bxe_B1449 hypothetical protein; LRV FeS4 cluster domain-containing protein 1495027 6159927 Lcho_1408 Leptothrix cholodnii SP-6 LRV FeS4 cluster domain-containing protein YP_001790441.1 1494215 D 395495 CDS YP_001790442.1 171058093 6159928 1495041..1495376 1 NC_010524.1 PFAM: NifZ family protein; KEGG: bxe:Bxe_B1450 hypothetical protein; NifZ family protein 1495376 6159928 Lcho_1409 Leptothrix cholodnii SP-6 NifZ family protein YP_001790442.1 1495041 D 395495 CDS YP_001790443.1 171058094 6159929 1495392..1495670 1 NC_010524.1 KEGG: mca:MCA0210 NifZ protein, putative; NifZ protein 1495670 6159929 Lcho_1410 Leptothrix cholodnii SP-6 NifZ protein YP_001790443.1 1495392 D 395495 CDS YP_001790444.1 171058095 6160052 1495673..1496089 1 NC_010524.1 KEGG: bxe:Bxe_B1452 hypothetical protein; hypothetical protein 1496089 6160052 Lcho_1411 Leptothrix cholodnii SP-6 hypothetical protein YP_001790444.1 1495673 D 395495 CDS YP_001790445.1 171058096 6160053 1496086..1497261 1 NC_010524.1 PFAM: aminotransferase class V; KEGG: bvi:Bcep1808_6002 aminotransferase, class V; class V aminotransferase 1497261 6160053 Lcho_1412 Leptothrix cholodnii SP-6 class V aminotransferase YP_001790445.1 1496086 D 395495 CDS YP_001790446.1 171058097 6160054 1497306..1497524 1 NC_010524.1 TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU family protein; KEGG: mca:MCA0213 hypothetical protein; nitrogen fixation protein FixT 1497524 6160054 Lcho_1413 Leptothrix cholodnii SP-6 nitrogen fixation protein FixT YP_001790446.1 1497306 D 395495 CDS YP_001790447.1 171058098 6160055 1497536..1497823 1 NC_010524.1 KEGG: pna:Pnap_1584 hypothetical protein; hypothetical protein 1497823 6160055 Lcho_1414 Leptothrix cholodnii SP-6 hypothetical protein YP_001790447.1 1497536 D 395495 CDS YP_001790448.1 171058099 6160056 1497828..1499033 1 NC_010524.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bvi:Bcep1808_6005 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 1499033 6160056 Lcho_1415 Leptothrix cholodnii SP-6 DegT/DnrJ/EryC1/StrS aminotransferase YP_001790448.1 1497828 D 395495 CDS YP_001790449.1 171058100 6160057 1499045..1499887 1 NC_010524.1 KEGG: pna:Pnap_1586 hypothetical protein; hypothetical protein 1499887 6160057 Lcho_1416 Leptothrix cholodnii SP-6 hypothetical protein YP_001790449.1 1499045 D 395495 CDS YP_001790450.1 171058101 6160103 1499933..1500238 1 NC_010524.1 PFAM: ferredoxin; KEGG: bbt:BBta_5894 putative ferredoxin, 2Fe-2S; ferredoxin 1500238 6160103 Lcho_1417 Leptothrix cholodnii SP-6 ferredoxin YP_001790450.1 1499933 D 395495 CDS YP_001790451.1 171058102 6160104 1500294..1501484 1 NC_010524.1 PFAM: amine oxidase; KEGG: azc:AZC_3405 flavin-containing protein; amine oxidase 1501484 6160104 Lcho_1418 Leptothrix cholodnii SP-6 amine oxidase YP_001790451.1 1500294 D 395495 CDS YP_001790452.1 171058103 6160105 1501494..1501850 1 NC_010524.1 hypothetical protein 1501850 6160105 Lcho_1419 Leptothrix cholodnii SP-6 hypothetical protein YP_001790452.1 1501494 D 395495 CDS YP_001790453.1 171058104 6160106 1501989..1502861 1 NC_010524.1 KEGG: pna:Pnap_1062 hypothetical protein; hypothetical protein 1502861 6160106 Lcho_1420 Leptothrix cholodnii SP-6 hypothetical protein YP_001790453.1 1501989 D 395495 CDS YP_001790454.1 171058105 6160107 complement(1502863..1503447) 1 NC_010524.1 PFAM: Phosphoglycerate mutase; KEGG: mpt:Mpe_A3811 hypothetical protein; putative phosphohistidine phosphatase SixA 1503447 6160107 Lcho_1421 Leptothrix cholodnii SP-6 putative phosphohistidine phosphatase SixA YP_001790454.1 1502863 R 395495 CDS YP_001790455.1 171058106 6160108 complement(1503483..1503794) 1 NC_010524.1 KEGG: rfr:Rfer_1416 hypothetical protein; hypothetical protein 1503794 6160108 Lcho_1422 Leptothrix cholodnii SP-6 hypothetical protein YP_001790455.1 1503483 R 395495 CDS YP_001790456.1 171058107 6160215 complement(1503881..1504300) 1 NC_010524.1 PFAM: Immunoglobulin I-set domain protein; SMART: Immunoglobulin subtype; KEGG: dsy:DSY0542 hypothetical protein; immunoglobulin I-set domain-containing protein 1504300 6160215 Lcho_1423 Leptothrix cholodnii SP-6 immunoglobulin I-set domain-containing protein YP_001790456.1 1503881 R 395495 CDS YP_001790457.1 171058108 6160216 1504573..1506354 1 NC_010524.1 PFAM: protein of unknown function DUF255; KEGG: pna:Pnap_2043 protein of unknown function DUF255; hypothetical protein 1506354 6160216 Lcho_1424 Leptothrix cholodnii SP-6 hypothetical protein YP_001790457.1 1504573 D 395495 CDS YP_001790458.1 171058109 6160217 1506535..1507680 1 NC_010524.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_1745 diguanylate cyclase (GGDEF domain); diguanylate cyclase 1507680 6160217 Lcho_1425 Leptothrix cholodnii SP-6 diguanylate cyclase YP_001790458.1 1506535 D 395495 CDS YP_001790459.1 171058110 6160218 complement(1507800..1508096) 1 NC_010524.1 KEGG: bra:BRADO1846 hypothetical protein; hypothetical protein 1508096 6160218 Lcho_1426 Leptothrix cholodnii SP-6 hypothetical protein YP_001790459.1 1507800 R 395495 CDS YP_001790460.1 171058111 6160219 complement(1508152..1508394) 1 NC_010524.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: pna:Pnap_2352 putative regulatory protein, FmdB family; FmdB family regulatory protein 1508394 6160219 Lcho_1427 Leptothrix cholodnii SP-6 FmdB family regulatory protein YP_001790460.1 1508152 R 395495 CDS YP_001790461.1 171058112 6160220 complement(1508550..1509140) 1 NC_010524.1 KEGG: bvi:Bcep1808_6012 hypothetical protein; hypothetical protein 1509140 6160220 Lcho_1428 Leptothrix cholodnii SP-6 hypothetical protein YP_001790461.1 1508550 R 395495 CDS YP_001790462.1 171058113 6160270 complement(1509189..1509326) 1 NC_010524.1 hypothetical protein 1509326 6160270 Lcho_1429 Leptothrix cholodnii SP-6 hypothetical protein YP_001790462.1 1509189 R 395495 CDS YP_001790463.1 171058114 6160271 1509709..1510590 1 NC_010524.1 nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis; nitrogenase reductase 1510590 nifH 6160271 nifH Leptothrix cholodnii SP-6 nitrogenase reductase YP_001790463.1 1509709 D 395495 CDS YP_001790464.1 171058115 6160272 1510701..1512158 1 NC_010524.1 KEGG: bxe:Bxe_B1466 nitrogenase, molybdenum-iron protein alpha chain(NifD); TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit alpha 1512158 6160272 Lcho_1431 Leptothrix cholodnii SP-6 nitrogenase molybdenum-iron protein subunit alpha YP_001790464.1 1510701 D 395495 CDS YP_001790465.1 171058116 6160273 1512287..1513846 1 NC_010524.1 KEGG: bvi:Bcep1808_6017 nitrogenase molybdenum-iron protein beta chain; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit beta 1513846 6160273 Lcho_1432 Leptothrix cholodnii SP-6 nitrogenase molybdenum-iron protein subunit beta YP_001790465.1 1512287 D 395495 CDS YP_001790466.1 171058117 6160274 1513984..1514301 1 NC_010524.1 KEGG: pna:Pnap_2341 hypothetical protein; hypothetical protein 1514301 6160274 Lcho_1433 Leptothrix cholodnii SP-6 hypothetical protein YP_001790466.1 1513984 D 395495 CDS YP_001790467.1 171058118 6160275 1514339..1514824 1 NC_010524.1 KEGG: pna:Pnap_2339 hypothetical protein; hypothetical protein 1514824 6160275 Lcho_1434 Leptothrix cholodnii SP-6 hypothetical protein YP_001790467.1 1514339 D 395495 CDS YP_001790468.1 171058119 6159842 1514852..1515370 1 NC_010524.1 TIGRFAM: co-chaperone Hsc20; PFAM: heat shock protein DnaJ domain protein; HSC20 oligomerisation; KEGG: mpt:Mpe_A2259 chaperone protein; co-chaperone Hsc20 1515370 6159842 Lcho_1435 Leptothrix cholodnii SP-6 co-chaperone Hsc20 YP_001790468.1 1514852 D 395495 CDS YP_001790469.1 171058120 6159843 complement(1515381..1516226) 1 NC_010524.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: dac:Daci_4439 transcriptional regulator, IclR family; IclR family transcriptional regulator 1516226 6159843 Lcho_1436 Leptothrix cholodnii SP-6 IclR family transcriptional regulator YP_001790469.1 1515381 R 395495 CDS YP_001790470.1 171058121 6159844 1516388..1517203 1 NC_010524.1 PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: pol:Bpro_1847 shikimate 5-dehydrogenase; shikimate dehydrogenase 1517203 6159844 Lcho_1437 Leptothrix cholodnii SP-6 shikimate dehydrogenase YP_001790470.1 1516388 D 395495 CDS YP_001790471.1 171058122 6159845 1517253..1518269 1 NC_010524.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pol:Bpro_4499 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit Dctp 1518269 6159845 Lcho_1438 Leptothrix cholodnii SP-6 TRAP dicarboxylate transporter subunit Dctp YP_001790471.1 1517253 D 395495 CDS YP_001790472.1 171058123 6159846 complement(1518314..1519168) 1 NC_010524.1 PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; KEGG: pna:Pnap_0622 NmrA family protein; NmrA family protein 1519168 6159846 Lcho_1439 Leptothrix cholodnii SP-6 NmrA family protein YP_001790472.1 1518314 R 395495 CDS YP_001790473.1 171058124 6159847 1519257..1519697 1 NC_010524.1 PFAM: helix-turn-helix HxlR type; KEGG: pna:Pnap_0621 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 1519697 6159847 Lcho_1440 Leptothrix cholodnii SP-6 HxlR family transcriptional regulator YP_001790473.1 1519257 D 395495 CDS YP_001790474.1 171058125 6160367 complement(1519615..1520466) 1 NC_010524.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ajs:Ajs_1913 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 1520466 6160367 Lcho_1441 Leptothrix cholodnii SP-6 uroporphyrin-III C-methyltransferase YP_001790474.1 1519615 R 395495 CDS YP_001790475.1 171058126 6160368 1520708..1522429 1 NC_010524.1 PFAM: cytochrome d1 heme region; KEGG: ajs:Ajs_1912 nitrite reductase (NO-forming); hydroxylamine reductase 1522429 6160368 Lcho_1442 Leptothrix cholodnii SP-6 hydroxylamine reductase YP_001790475.1 1520708 D 395495 CDS YP_001790476.1 171058127 6160369 1522637..1522966 1 NC_010524.1 KEGG: ajs:Ajs_1911 hypothetical protein; hypothetical protein 1522966 6160369 Lcho_1443 Leptothrix cholodnii SP-6 hypothetical protein YP_001790476.1 1522637 D 395495 CDS YP_001790477.1 171058128 6160370 1522963..1524156 1 NC_010524.1 PFAM: cytochrome d1 heme region; KEGG: ajs:Ajs_1910 cytochrome d1, heme region; cytochrome d1 heme subunit 1524156 6160370 Lcho_1444 Leptothrix cholodnii SP-6 cytochrome d1 heme subunit YP_001790477.1 1522963 D 395495 CDS YP_001790478.1 171058129 6160371 1524171..1525187 1 NC_010524.1 KEGG: ajs:Ajs_1909 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator 1525187 6160371 Lcho_1445 Leptothrix cholodnii SP-6 AsnC family transcriptional regulator YP_001790478.1 1524171 D 395495 CDS YP_001790479.1 171058130 6160372 1525174..1525665 1 NC_010524.1 KEGG: ajs:Ajs_1908 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator 1525665 6160372 Lcho_1446 Leptothrix cholodnii SP-6 AsnC family transcriptional regulator YP_001790479.1 1525174 D 395495 CDS YP_001790480.1 171058131 6161120 1525655..1526137 1 NC_010524.1 KEGG: ajs:Ajs_1907 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator 1526137 6161120 Lcho_1447 Leptothrix cholodnii SP-6 AsnC family transcriptional regulator YP_001790480.1 1525655 D 395495 CDS YP_001790481.1 171058132 6161121 1526145..1527401 1 NC_010524.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ajs:Ajs_1906 radical SAM domain protein; radical SAM domain-containing protein 1527401 6161121 Lcho_1448 Leptothrix cholodnii SP-6 radical SAM domain-containing protein YP_001790481.1 1526145 D 395495 CDS YP_001790482.1 171058133 6161122 1527582..1530419 1 NC_010524.1 KEGG: dar:Daro_2934 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase 1530419 6161122 Lcho_1449 Leptothrix cholodnii SP-6 PAS/PAC sensor hybrid histidine kinase YP_001790482.1 1527582 D 395495 CDS YP_001790483.1 171058134 6161123 1530590..1532167 1 NC_010524.1 PFAM: cytochrome d1 heme region; KEGG: ajs:Ajs_1905 cytochrome d1, heme region; cytochrome d1 heme subunit 1532167 6161123 Lcho_1450 Leptothrix cholodnii SP-6 cytochrome d1 heme subunit YP_001790483.1 1530590 D 395495 CDS YP_001790484.1 171058135 6161124 complement(1532188..1533342) 1 NC_010524.1 KEGG: gvi:glr2981 hypothetical protein; hypothetical protein 1533342 6161124 Lcho_1451 Leptothrix cholodnii SP-6 hypothetical protein YP_001790484.1 1532188 R 395495 CDS YP_001790485.1 171058136 6161125 complement(1533339..1534490) 1 NC_010524.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pol:Bpro_1962 hypothetical protein; hypothetical protein 1534490 6161125 Lcho_1452 Leptothrix cholodnii SP-6 hypothetical protein YP_001790485.1 1533339 R 395495 CDS YP_001790486.1 171058137 6162847 1534573..1534791 1 NC_010524.1 hypothetical protein 1534791 6162847 Lcho_1453 Leptothrix cholodnii SP-6 hypothetical protein YP_001790486.1 1534573 D 395495 CDS YP_001790487.1 171058138 6162848 complement(1534856..1535614) 1 NC_010524.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: ajs:Ajs_1904 putative transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 1535614 6162848 Lcho_1454 Leptothrix cholodnii SP-6 Crp/FNR family transcriptional regulator YP_001790487.1 1534856 R 395495 CDS YP_001790488.1 171058139 6162849 complement(1535705..1536382) 1 NC_010524.1 PFAM: protein of unknown function DUF799; KEGG: psp:PSPPH_1127 lipoprotein, putative; hypothetical protein 1536382 6162849 Lcho_1455 Leptothrix cholodnii SP-6 hypothetical protein YP_001790488.1 1535705 R 395495 CDS YP_001790489.1 171058140 6162850 complement(1536379..1536759) 1 NC_010524.1 KEGG: reh:H16_B0250 lipoprotein; lipoprotein 1536759 6162850 Lcho_1456 Leptothrix cholodnii SP-6 lipoprotein YP_001790489.1 1536379 R 395495 CDS YP_001790490.1 171058141 6162851 complement(1536756..1537433) 1 NC_010524.1 PFAM: Curli production assembly/transport component CsgG; KEGG: pap:PSPA7_0048 lipoprotein, putative; curli production assembly/transport component CsgG 1537433 6162851 Lcho_1457 Leptothrix cholodnii SP-6 curli production assembly/transport component CsgG YP_001790490.1 1536756 R 395495 CDS YP_001790491.1 171058142 6162852 complement(1537528..1537983) 1 NC_010524.1 TIGRFAM: hydrogenase maturation protease; KEGG: bxe:Bxe_C0532 hypothetical protein; hydrogenase maturation protease 1537983 6162852 Lcho_1458 Leptothrix cholodnii SP-6 hydrogenase maturation protease YP_001790491.1 1537528 R 395495 CDS YP_001790492.1 171058143 6163313 complement(1538004..1539518) 1 NC_010524.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: bxe:Bxe_C0531 putative nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase large subunit 1539518 6163313 Lcho_1459 Leptothrix cholodnii SP-6 nickel-dependent hydrogenase large subunit YP_001790492.1 1538004 R 395495 CDS YP_001790493.1 171058144 6163314 complement(1539661..1540236) 1 NC_010524.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: rfr:Rfer_3856 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 1540236 6163314 Lcho_1460 Leptothrix cholodnii SP-6 NADH ubiquinone oxidoreductase 20 kDa subunit YP_001790493.1 1539661 R 395495 CDS YP_001790494.1 171058145 6163315 complement(1540233..1540937) 1 NC_010524.1 PFAM: ferredoxin; KEGG: rfr:Rfer_3857 hydrogen dehydrogenase; ferredoxin 1540937 6163315 Lcho_1461 Leptothrix cholodnii SP-6 ferredoxin YP_001790494.1 1540233 R 395495 CDS YP_001790495.1 171058146 6163316 complement(1540934..1542817) 1 NC_010524.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: rfr:Rfer_3858 respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; respiratory-chain NADH dehydrogenase domain-containing protein 1542817 6163316 Lcho_1462 Leptothrix cholodnii SP-6 respiratory-chain NADH dehydrogenase domain-containing protein YP_001790495.1 1540934 R 395495 CDS YP_001790496.1 171058147 6163317 1542933..1544027 1 NC_010524.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: aha:AHA_2190 response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; response regulator receiver modulated metal dependent phosphohydrolase 1544027 6163317 Lcho_1463 Leptothrix cholodnii SP-6 response regulator receiver modulated metal dependent phosphohydrolase YP_001790496.1 1542933 D 395495 CDS YP_001790497.1 171058148 6163318 1544049..1547456 1 NC_010524.1 KEGG: aha:AHA_2188 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; multi-sensor hybrid histidine kinase 1547456 6163318 Lcho_1464 Leptothrix cholodnii SP-6 multi-sensor hybrid histidine kinase YP_001790497.1 1544049 D 395495 CDS YP_001790498.1 171058149 6161540 complement(1547472..1549328) 1 NC_010524.1 PFAM: von Willebrand factor type A; small acid-soluble spore P family protein; KEGG: dar:Daro_3197 von Willebrand factor, type A; von Willebrand factor type A 1549328 6161540 Lcho_1465 Leptothrix cholodnii SP-6 von Willebrand factor type A YP_001790498.1 1547472 R 395495 CDS YP_001790499.1 171058150 6161541 complement(1549328..1550362) 1 NC_010524.1 KEGG: tbd:Tbd_0556 iron-sulfur cluster-binding protein; iron-sulfur cluster-binding protein 1550362 6161541 Lcho_1466 Leptothrix cholodnii SP-6 iron-sulfur cluster-binding protein YP_001790499.1 1549328 R 395495 CDS YP_001790500.1 171058151 6161542 complement(1550454..1551287) 1 NC_010524.1 PFAM: ATPase associated with various cellular activities AAA_5; CbbQ/NirQ/NorQ domain protein; KEGG: tbd:Tbd_0558 putative nitric oxide reductase activation protein NorQ; ATPase 1551287 6161542 Lcho_1467 Leptothrix cholodnii SP-6 ATPase YP_001790500.1 1550454 R 395495 CDS YP_001790501.1 171058152 6161543 complement(1551320..1552771) 1 NC_010524.1 PFAM: cytochrome c oxidase subunit I; KEGG: azo:azo3089 putative nitric-oxide reductase subunit B; cytochrome c oxidase subunit I 1552771 6161543 Lcho_1468 Leptothrix cholodnii SP-6 cytochrome c oxidase subunit I YP_001790501.1 1551320 R 395495 CDS YP_001790502.1 171058153 6161544 complement(1552783..1553217) 1 NC_010524.1 KEGG: azo:azo3088 putative nitric-oxide reductase subunit C; putative nitric-oxide reductase subunit C 1553217 6161544 Lcho_1469 Leptothrix cholodnii SP-6 putative nitric-oxide reductase subunit C YP_001790502.1 1552783 R 395495 CDS YP_001790503.1 171058154 6161545 1553389..1554399 1 NC_010524.1 PFAM: peptidase U32; KEGG: ajs:Ajs_3220 peptidase U32; peptidase U32 1554399 6161545 Lcho_1470 Leptothrix cholodnii SP-6 peptidase U32 YP_001790503.1 1553389 D 395495 CDS YP_001790504.1 171058155 6161576 1554445..1555398 1 NC_010524.1 PFAM: peptidase U32; KEGG: ajs:Ajs_3221 peptidase U32; peptidase U32 1555398 6161576 Lcho_1471 Leptothrix cholodnii SP-6 peptidase U32 YP_001790504.1 1554445 D 395495 CDS YP_001790505.1 171058156 6161577 1555395..1555862 1 NC_010524.1 PFAM: Sterol-binding domain protein; KEGG: azo:azo0372 hypothetical protein; sterol-binding domain-containing protein 1555862 6161577 Lcho_1472 Leptothrix cholodnii SP-6 sterol-binding domain-containing protein YP_001790505.1 1555395 D 395495 CDS YP_001790506.1 171058157 6161578 complement(1555886..1557058) 1 NC_010524.1 PFAM: CBS domain containing protein; HPP family protein?; KEGG: mpt:Mpe_A0317 CBS domain protein; hypothetical protein 1557058 6161578 Lcho_1473 Leptothrix cholodnii SP-6 hypothetical protein YP_001790506.1 1555886 R 395495 CDS YP_001790507.1 171058158 6161579 1557224..1557493 1 NC_010524.1 KEGG: rme:Rmet_4922 hypothetical protein; hypothetical protein 1557493 6161579 Lcho_1474 Leptothrix cholodnii SP-6 hypothetical protein YP_001790507.1 1557224 D 395495 CDS YP_001790508.1 171058159 6161580 1557509..1558708 1 NC_010524.1 PFAM: NnrS family protein; KEGG: pna:Pnap_3970 NnrS family protein; NnrS family protein 1558708 6161580 Lcho_1475 Leptothrix cholodnii SP-6 NnrS family protein YP_001790508.1 1557509 D 395495 CDS YP_001790509.1 171058160 6161581 1558716..1559213 1 NC_010524.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rfr:Rfer_1866 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 1559213 6161581 Lcho_1476 Leptothrix cholodnii SP-6 BadM/Rrf2 family transcriptional regulator YP_001790509.1 1558716 D 395495 CDS YP_001790510.1 171058161 6162012 1559210..1560655 1 NC_010524.1 TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: pna:Pnap_2096 4Fe-4S ferredoxin, iron-sulfur binding domain protein; cytochrome c oxidase accessory protein CcoG 1560655 6162012 Lcho_1477 Leptothrix cholodnii SP-6 cytochrome c oxidase accessory protein CcoG YP_001790510.1 1559210 D 395495 CDS YP_001790511.1 171058162 6162013 complement(1560683..1561258) 1 NC_010524.1 PFAM: NosL family protein; KEGG: ajs:Ajs_1134 NosL family protein; NosL family protein 1561258 6162013 Lcho_1478 Leptothrix cholodnii SP-6 NosL family protein YP_001790511.1 1560683 R 395495 CDS YP_001790512.1 171058163 6162014 complement(1561255..1562070) 1 NC_010524.1 PFAM: ABC-2 type transporter; KEGG: ajs:Ajs_1135 ABC-2 type transporter; ABC-2 type transporter 1562070 6162014 Lcho_1479 Leptothrix cholodnii SP-6 ABC-2 type transporter YP_001790512.1 1561255 R 395495 CDS YP_001790513.1 171058164 6162015 complement(1562070..1563086) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_1136 ABC transporter related; ABC transporter-like protein 1563086 6162015 Lcho_1480 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001790513.1 1562070 R 395495 CDS YP_001790514.1 171058165 6162016 complement(1563076..1564278) 1 NC_010524.1 PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: ajs:Ajs_1137 periplasmic copper-binding; periplasmic copper-binding protein 1564278 6162016 Lcho_1481 Leptothrix cholodnii SP-6 periplasmic copper-binding protein YP_001790514.1 1563076 R 395495 CDS YP_001790515.1 171058166 6162017 complement(1564368..1567028) 1 NC_010524.1 PFAM: FMN-binding domain protein; KEGG: ajs:Ajs_1138 FMN-binding domain protein; FMN-binding domain-containing protein 1567028 6162017 Lcho_1482 Leptothrix cholodnii SP-6 FMN-binding domain-containing protein YP_001790515.1 1564368 R 395495 CDS YP_001790516.1 171058167 6162221 complement(1567078..1569012) 1 NC_010524.1 reduces nitrous oxide to nitrogen; nitrous-oxide reductase 1569012 6162221 Lcho_1483 Leptothrix cholodnii SP-6 nitrous-oxide reductase YP_001790516.1 1567078 R 395495 CDS YP_001790517.1 171058168 6162222 1569259..1570368 1 NC_010524.1 PFAM: ApbE family lipoprotein; KEGG: rso:RSp1366 probable thiamine biosynthesis ApbE transmembrane protein; ApbE family lipoprotein 1570368 6162222 Lcho_1484 Leptothrix cholodnii SP-6 ApbE family lipoprotein YP_001790517.1 1569259 D 395495 CDS YP_001790518.1 171058169 6162223 1570365..1571669 1 NC_010524.1 KEGG: mpt:Mpe_A1702 putative NnrS family; NnrS family protein 1571669 6162223 Lcho_1485 Leptothrix cholodnii SP-6 NnrS family protein YP_001790518.1 1570365 D 395495 CDS YP_001790519.1 171058170 6162224 1571714..1572031 1 NC_010524.1 PFAM: protein of unknown function DUF59; KEGG: mpt:Mpe_A1701 hypothetical protein; hypothetical protein 1572031 6162224 Lcho_1486 Leptothrix cholodnii SP-6 hypothetical protein YP_001790519.1 1571714 D 395495 CDS YP_001790520.1 171058171 6162225 1572049..1573170 1 NC_010524.1 KEGG: pol:Bpro_4726 hypothetical protein; hypothetical protein 1573170 6162225 Lcho_1487 Leptothrix cholodnii SP-6 hypothetical protein YP_001790520.1 1572049 D 395495 CDS YP_001790521.1 171058172 6162226 complement(1573231..1573536) 1 NC_010524.1 PFAM: cytochrome c class I; KEGG: pol:Bpro_2050 cytochrome c, class I; cytochrome c class I 1573536 6162226 Lcho_1488 Leptothrix cholodnii SP-6 cytochrome c class I YP_001790521.1 1573231 R 395495 CDS YP_001790522.1 171058173 6162306 1573707..1573970 1 NC_010524.1 KEGG: pol:Bpro_2051 hypothetical protein; hypothetical protein 1573970 6162306 Lcho_1489 Leptothrix cholodnii SP-6 hypothetical protein YP_001790522.1 1573707 D 395495 CDS YP_001790523.1 171058174 6162307 complement(1573992..1575674) 1 NC_010524.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1575674 6162307 Lcho_1490 Leptothrix cholodnii SP-6 dihydroxy-acid dehydratase YP_001790523.1 1573992 R 395495 CDS YP_001790524.1 171058175 6162308 1575775..1576701 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A1388 putative isoleucine biosynthesis transcriptional activator; LysR family transcriptional regulator 1576701 6162308 Lcho_1491 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001790524.1 1575775 D 395495 CDS YP_001790525.1 171058176 6162309 1576728..1577561 1 NC_010524.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: mpt:Mpe_A1389 putative prolipoprotein diacylglyceryl transferase transmembrane; prolipoprotein diacylglyceryl transferase 1577561 6162309 Lcho_1492 Leptothrix cholodnii SP-6 prolipoprotein diacylglyceryl transferase YP_001790525.1 1576728 D 395495 CDS YP_001790526.1 171058177 6162310 1577572..1578645 1 NC_010524.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 1578645 6162310 Lcho_1493 Leptothrix cholodnii SP-6 putative DNA-binding/iron metalloprotein/AP endonuclease YP_001790526.1 1577572 D 395495 CDS YP_001790527.1 171058178 6162311 1578694..1579974 1 NC_010524.1 KEGG: pol:Bpro_3263 putative transporter signal peptide protein; putative transporter signal peptide protein 1579974 6162311 Lcho_1494 Leptothrix cholodnii SP-6 putative transporter signal peptide protein YP_001790527.1 1578694 D 395495 CDS YP_001790528.1 171058179 6162409 1580010..1581176 1 NC_010524.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1581176 6162409 Lcho_1495 Leptothrix cholodnii SP-6 aspartate aminotransferase YP_001790528.1 1580010 D 395495 CDS YP_001790529.1 171058180 6162410 1581315..1581578 1 NC_010524.1 PFAM: ribosomal protein S15; KEGG: mpt:Mpe_A1398 30S ribosomal protein S15; 30S ribosomal protein S15 1581578 6162410 Lcho_1496 Leptothrix cholodnii SP-6 30S ribosomal protein S15 YP_001790529.1 1581315 D 395495 CDS YP_001790530.1 171058181 6162411 1581802..1584105 1 NC_010524.1 KEGG: mpt:Mpe_A1399 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 1584105 6162411 Lcho_1497 Leptothrix cholodnii SP-6 polynucleotide phosphorylase/polyadenylase YP_001790530.1 1581802 D 395495 CDS YP_001790531.1 171058182 6162412 1584118..1585104 1 NC_010524.1 TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ajs:Ajs_0954 alcohol dehydrogenase, zinc-binding domain protein; PIG3 family NAD(P)H quinone oxidoreductase 1585104 6162412 Lcho_1498 Leptothrix cholodnii SP-6 PIG3 family NAD(P)H quinone oxidoreductase YP_001790531.1 1584118 D 395495 CDS YP_001790532.1 171058183 6162413 1585147..1585893 1 NC_010524.1 PFAM: triosephosphate isomerase; KEGG: mpt:Mpe_A1401 triphosphate isomerase; Triose-phosphate isomerase 1585893 6162413 Lcho_1499 Leptothrix cholodnii SP-6 Triose-phosphate isomerase YP_001790532.1 1585147 D 395495 CDS YP_001790533.1 171058184 6162414 1585929..1586330 1 NC_010524.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: mpt:Mpe_A1402 general secretory pathway, export membrane protein; preprotein translocase subunit SecG 1586330 6162414 Lcho_1500 Leptothrix cholodnii SP-6 preprotein translocase subunit SecG YP_001790533.1 1585929 D 395495 CDS YP_001790534.1 171058185 6162436 1586824..1587183 1 NC_010524.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: mpt:Mpe_A1403 NADH dehydrogenase I chain A; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 1587183 6162436 Lcho_1501 Leptothrix cholodnii SP-6 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_001790534.1 1586824 D 395495 CDS YP_001790535.1 171058186 6162437 1587208..1587684 1 NC_010524.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1587684 6162437 Lcho_1502 Leptothrix cholodnii SP-6 NADH dehydrogenase subunit B YP_001790535.1 1587208 D 395495 CDS YP_001790536.1 171058187 6162438 1587698..1588297 1 NC_010524.1 KEGG: reh:H16_A1052 NADH dehydrogenase chain C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH (or F420H2) dehydrogenase subunit C 1588297 6162438 Lcho_1503 Leptothrix cholodnii SP-6 NADH (or F420H2) dehydrogenase subunit C YP_001790536.1 1587698 D 395495 CDS YP_001790537.1 171058188 6162439 1588316..1589569 1 NC_010524.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1589569 6162439 Lcho_1504 Leptothrix cholodnii SP-6 NADH dehydrogenase subunit D YP_001790537.1 1588316 D 395495 CDS YP_001790538.1 171058189 6161395 1589578..1590105 1 NC_010524.1 KEGG: ajs:Ajs_0961 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; NADH-quinone oxidoreductase subunit E 1590105 6161395 Lcho_1505 Leptothrix cholodnii SP-6 NADH-quinone oxidoreductase subunit E YP_001790538.1 1589578 D 395495 CDS YP_001790539.1 171058190 6161396 1590110..1591468 1 NC_010524.1 KEGG: mpt:Mpe_A1408 NADH dehydrogenase (quinone); TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH-quinone oxidoreductase subunit F 1591468 6161396 Lcho_1506 Leptothrix cholodnii SP-6 NADH-quinone oxidoreductase subunit F YP_001790539.1 1590110 D 395495 CDS YP_001790540.1 171058191 6161397 1591487..1593799 1 NC_010524.1 TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: ferredoxin; molybdopterin oxidoreductase; KEGG: mpt:Mpe_A1409 putative NADH dehydrogenase I chain G; NADH-quinone oxidoreductase subunit G 1593799 6161397 Lcho_1507 Leptothrix cholodnii SP-6 NADH-quinone oxidoreductase subunit G YP_001790540.1 1591487 D 395495 CDS YP_001790541.1 171058192 6161398 1593814..1594872 1 NC_010524.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: mpt:Mpe_A1410 NADH-ubiquinone oxidoreductase, chain H; NADH dehydrogenase (quinone) 1594872 6161398 Lcho_1508 Leptothrix cholodnii SP-6 NADH dehydrogenase (quinone) YP_001790541.1 1593814 D 395495 CDS YP_001790542.1 171058193 6161399 1594903..1595400 1 NC_010524.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1595400 6161399 Lcho_1509 Leptothrix cholodnii SP-6 NADH dehydrogenase subunit I YP_001790542.1 1594903 D 395495 CDS YP_001790543.1 171058194 6161400 1595475..1596125 1 NC_010524.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: mpt:Mpe_A1412 NADH-ubiquinone oxidoreductase, chain J; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 1596125 6161400 Lcho_1510 Leptothrix cholodnii SP-6 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_001790543.1 1595475 D 395495 CDS YP_001790544.1 171058195 6161401 1596125..1596430 1 NC_010524.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: mpt:Mpe_A1413 putative transmembrane NADH dehydrogenase I (chain K) oxidoreductase protein; NADH-ubiquinone oxidoreductase chain 4L 1596430 6161401 Lcho_1511 Leptothrix cholodnii SP-6 NADH-ubiquinone oxidoreductase chain 4L YP_001790544.1 1596125 D 395495 CDS YP_001790545.1 171058196 6163338 1596452..1598452 1 NC_010524.1 KEGG: mpt:Mpe_A1414 NADH dehydrogenase (quinone); TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L 1598452 6163338 Lcho_1512 Leptothrix cholodnii SP-6 proton-translocating NADH-quinone oxidoreductase subunit L YP_001790545.1 1596452 D 395495 CDS YP_001790546.1 171058197 6163339 1598469..1599941 1 NC_010524.1 KEGG: mpt:Mpe_A1415 NADH dehydrogenase (quinone); TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 1599941 6163339 Lcho_1513 Leptothrix cholodnii SP-6 proton-translocating NADH-quinone oxidoreductase subunit M YP_001790546.1 1598469 D 395495 CDS YP_001790547.1 171058198 6163340 1599961..1601442 1 NC_010524.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 1601442 6163340 Lcho_1514 Leptothrix cholodnii SP-6 NADH dehydrogenase subunit N YP_001790547.1 1599961 D 395495 CDS YP_001790548.1 171058199 6163341 1601462..1602088 1 NC_010524.1 PFAM: NUDIX hydrolase; KEGG: mpt:Mpe_A1418 ADP-ribose pyrophosphatase; NUDIX hydrolase 1602088 6163341 Lcho_1515 Leptothrix cholodnii SP-6 NUDIX hydrolase YP_001790548.1 1601462 D 395495 CDS YP_001790549.1 171058200 6163342 1602099..1602581 1 NC_010524.1 PFAM: protein of unknown function DUF1178; KEGG: mpt:Mpe_A1419 hypothetical protein; hypothetical protein 1602581 6163342 Lcho_1516 Leptothrix cholodnii SP-6 hypothetical protein YP_001790549.1 1602099 D 395495 CDS YP_001790550.1 171058201 6163343 complement(1602613..1604031) 1 NC_010524.1 PFAM: FAD linked oxidase domain protein; KEGG: mpt:Mpe_A1420 putative oxidoreductase protein; FAD linked oxidase domain-containing protein 1604031 6163343 Lcho_1517 Leptothrix cholodnii SP-6 FAD linked oxidase domain-containing protein YP_001790550.1 1602613 R 395495 CDS YP_001790551.1 171058202 6161563 complement(1604028..1604402) 1 NC_010524.1 KEGG: mpt:Mpe_A1421 putative transmembrane protein; putative transmembrane protein 1604402 6161563 Lcho_1518 Leptothrix cholodnii SP-6 putative transmembrane protein YP_001790551.1 1604028 R 395495 CDS YP_001790552.1 171058203 6161564 1604515..1605789 1 NC_010524.1 PFAM: ribonuclease BN; KEGG: mpt:Mpe_A1422 putative ribonuclease BN transmembrane protein; ribonuclease BN 1605789 6161564 Lcho_1519 Leptothrix cholodnii SP-6 ribonuclease BN YP_001790552.1 1604515 D 395495 CDS YP_001790553.1 171058204 6161565 1605959..1607590 1 NC_010524.1 KEGG: mpt:Mpe_A2920 aerotaxis sensor receptor; TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer 1607590 6161565 Lcho_1520 Leptothrix cholodnii SP-6 Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer YP_001790553.1 1605959 D 395495 CDS YP_001790554.1 171058205 6161566 complement(1607599..1608462) 1 NC_010524.1 PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_A1356 alpha/beta hydrolase fold protein; alpha/beta hydrolase fold protein 1608462 6161566 Lcho_1521 Leptothrix cholodnii SP-6 alpha/beta hydrolase fold protein YP_001790554.1 1607599 R 395495 CDS YP_001790555.1 171058206 6161567 complement(1608462..1609820) 1 NC_010524.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 1609820 6161567 Lcho_1522 Leptothrix cholodnii SP-6 O-acetylhomoserine aminocarboxypropyltransferase YP_001790555.1 1608462 R 395495 CDS YP_001790556.1 171058207 6161568 1609896..1610369 1 NC_010524.1 PFAM: CBS domain containing protein; KEGG: mpt:Mpe_A1423 hypothetical protein; signal-transduction protein 1610369 6161568 Lcho_1523 Leptothrix cholodnii SP-6 signal-transduction protein YP_001790556.1 1609896 D 395495 CDS YP_001790557.1 171058208 6161616 complement(1610441..1611004) 1 NC_010524.1 PFAM: CheW domain protein; KEGG: mpt:Mpe_A0587 chemotaxis signal transduction protein; CheW protein 1611004 6161616 Lcho_1524 Leptothrix cholodnii SP-6 CheW protein YP_001790557.1 1610441 R 395495 CDS YP_001790558.1 171058209 6161617 1611259..1612416 1 NC_010524.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1612416 6161617 Lcho_1525 Leptothrix cholodnii SP-6 chorismate synthase YP_001790558.1 1611259 D 395495 CDS YP_001790559.1 171058210 6161618 complement(1612439..1613551) 1 NC_010524.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: dar:Daro_1148 chemotaxis-specific methylesterase; response regulator receiver modulated CheB methylesterase 1613551 6161618 Lcho_1526 Leptothrix cholodnii SP-6 response regulator receiver modulated CheB methylesterase YP_001790559.1 1612439 R 395495 CDS YP_001790560.1 171058211 6161619 complement(1613594..1614076) 1 NC_010524.1 stimulates methylation of MCP proteins; KEGG: hch:HCH_03704 chemotaxis protein, stimulates methylation of MCP protein; hypothetical protein 1614076 6161619 Lcho_1527 Leptothrix cholodnii SP-6 hypothetical protein YP_001790560.1 1613594 R 395495 CDS YP_001790561.1 171058212 6161620 complement(1614090..1614890) 1 NC_010524.1 PFAM: MCP methyltransferase CheR-type; KEGG: aav:Aave_3546 MCP methyltransferase, CheR-type; CheR-type MCP methyltransferase 1614890 6161620 Lcho_1528 Leptothrix cholodnii SP-6 CheR-type MCP methyltransferase YP_001790561.1 1614090 R 395495 CDS YP_001790562.1 171058213 6161621 complement(1614887..1615438) 1 NC_010524.1 PFAM: CheW domain protein; KEGG: cvi:CV_1012 signal transduction chemotaxis protein; CheW protein 1615438 6161621 Lcho_1529 Leptothrix cholodnii SP-6 CheW protein YP_001790562.1 1614887 R 395495 CDS YP_001790563.1 171058214 6161682 complement(1615460..1618132) 1 NC_010524.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold-4 domain protein; KEGG: aha:AHA_1033 methyl-accepting chemotaxis protein; Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer 1618132 6161682 Lcho_1530 Leptothrix cholodnii SP-6 Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer YP_001790563.1 1615460 R 395495 CDS YP_001790564.1 171058215 6161683 complement(1618210..1621269) 1 NC_010524.1 TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: asa:ASA_3269 methyl-accepting chemotaxis protein; Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer 1621269 6161683 Lcho_1531 Leptothrix cholodnii SP-6 Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer YP_001790564.1 1618210 R 395495 CDS YP_001790565.1 171058216 6161684 complement(1621359..1623920) 1 NC_010524.1 KEGG: asa:ASA_3269 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer 1623920 6161684 Lcho_1532 Leptothrix cholodnii SP-6 Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer YP_001790565.1 1621359 R 395495 CDS YP_001790566.1 171058217 6161685 complement(1623946..1626198) 1 NC_010524.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: aha:AHA_1036 chemotaxis protein CheA; CheA signal transduction histidine kinase 1626198 6161685 Lcho_1533 Leptothrix cholodnii SP-6 CheA signal transduction histidine kinase YP_001790566.1 1623946 R 395495 CDS YP_001790567.1 171058218 6161686 complement(1626195..1626527) 1 NC_010524.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: azo:azo0409 putative STAS domain protein; anti-sigma-factor antagonist 1626527 6161686 Lcho_1534 Leptothrix cholodnii SP-6 anti-sigma-factor antagonist YP_001790567.1 1626195 R 395495 CDS YP_001790568.1 171058219 6161687 complement(1626537..1626902) 1 NC_010524.1 PFAM: response regulator receiver; KEGG: psp:PSPPH_0807 chemotaxis protein CheY; response regulator receiver protein 1626902 6161687 Lcho_1535 Leptothrix cholodnii SP-6 response regulator receiver protein YP_001790568.1 1626537 R 395495 CDS YP_001790569.1 171058220 6161295 complement(1626908..1627276) 1 NC_010524.1 PFAM: response regulator receiver; KEGG: aha:AHA_1038 chemotaxis protein CheY; response regulator receiver protein 1627276 6161295 Lcho_1536 Leptothrix cholodnii SP-6 response regulator receiver protein YP_001790569.1 1626908 R 395495 CDS YP_001790570.1 171058221 6161296 complement(1627291..1628424) 1 NC_010524.1 PFAM: chemotaxis sensory transducer; KEGG: pmy:Pmen_1571 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1628424 6161296 Lcho_1537 Leptothrix cholodnii SP-6 methyl-accepting chemotaxis sensory transducer YP_001790570.1 1627291 R 395495 CDS YP_001790571.1 171058222 6161297 1628769..1630010 1 NC_010524.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rfr:Rfer_2342 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1630010 6161297 Lcho_1538 Leptothrix cholodnii SP-6 methyl-accepting chemotaxis sensory transducer YP_001790571.1 1628769 D 395495 CDS YP_001790572.1 171058223 6161298 1630110..1632155 1 NC_010524.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; KEGG: vei:Veis_4873 diguanylate cyclase with PAS/PAC sensor; PAS/PAC sensor-containing diguanylate cyclase 1632155 6161298 Lcho_1539 Leptothrix cholodnii SP-6 PAS/PAC sensor-containing diguanylate cyclase YP_001790572.1 1630110 D 395495 CDS YP_001790573.1 171058224 6161299 1632626..1633465 1 NC_010524.1 KEGG: aba:Acid345_0468 hypothetical protein; hypothetical protein 1633465 6161299 Lcho_1540 Leptothrix cholodnii SP-6 hypothetical protein YP_001790573.1 1632626 D 395495 CDS YP_001790574.1 171058225 6161300 1633530..1635500 1 NC_010524.1 KEGG: mca:MCA2189 cytochrome c family protein; cytochrome c family protein 1635500 6161300 Lcho_1541 Leptothrix cholodnii SP-6 cytochrome c family protein YP_001790574.1 1633530 D 395495 CDS YP_001790575.1 171058226 6161589 1635497..1637464 1 NC_010524.1 TIGRFAM: cytochrome C family protein; KEGG: aba:Acid345_0471 hypothetical protein; cytochrome C family protein 1637464 6161589 Lcho_1542 Leptothrix cholodnii SP-6 cytochrome C family protein YP_001790575.1 1635497 D 395495 CDS YP_001790576.1 171058227 6161590 1637565..1640069 1 NC_010524.1 PFAM: Sporulation domain protein; KEGG: mca:MCA2191 hypothetical protein; sporulation domain-containing protein 1640069 6161590 Lcho_1543 Leptothrix cholodnii SP-6 sporulation domain-containing protein YP_001790576.1 1637565 D 395495 CDS YP_001790577.1 171058228 6161591 1640047..1640751 1 NC_010524.1 KEGG: mpt:Mpe_A1215 heme ABC export system, ATP-binding protein CcmA; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase; heme exporter protein CcmA 1640751 6161591 Lcho_1544 Leptothrix cholodnii SP-6 heme exporter protein CcmA YP_001790577.1 1640047 D 395495 CDS YP_001790578.1 171058229 6161592 1640748..1641461 1 NC_010524.1 TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: mpt:Mpe_A1214 ABC transporter, permease domain protein; heme exporter protein CcmB 1641461 6161592 Lcho_1545 Leptothrix cholodnii SP-6 heme exporter protein CcmB YP_001790578.1 1640748 D 395495 CDS YP_001790579.1 171058230 6161593 1641673..1642416 1 NC_010524.1 TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: mpt:Mpe_A1213 ABC transporter, permease domain protein; heme exporter protein CcmC 1642416 6161593 Lcho_1546 Leptothrix cholodnii SP-6 heme exporter protein CcmC YP_001790579.1 1641673 D 395495 CDS YP_001790580.1 171058231 6161594 1642413..1642568 1 NC_010524.1 hypothetical protein 1642568 6161594 Lcho_1547 Leptothrix cholodnii SP-6 hypothetical protein YP_001790580.1 1642413 D 395495 CDS YP_001790581.1 171058232 6163522 1642653..1643114 1 NC_010524.1 PFAM: CcmE/CycJ protein; KEGG: mpt:Mpe_A1212 CcmE/CycJ protein; CcmE/CycJ protein 1643114 6163522 Lcho_1548 Leptothrix cholodnii SP-6 CcmE/CycJ protein YP_001790581.1 1642653 D 395495 CDS YP_001790582.1 171058233 6163523 1643111..1645093 1 NC_010524.1 TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: mpt:Mpe_A1211 cytochrome c-type biogenesis protein (CcmF); cytochrome c-type biogenesis protein CcmF 1645093 6163523 Lcho_1549 Leptothrix cholodnii SP-6 cytochrome c-type biogenesis protein CcmF YP_001790582.1 1643111 D 395495 CDS YP_001790583.1 171058234 6163524 1645090..1645620 1 NC_010524.1 TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mpt:Mpe_A1210 periplasmic protein thiol:disulfide oxidoreductase DsbE; periplasmic protein thiol--disulfide oxidoreductase DsbE 1645620 6163524 Lcho_1550 Leptothrix cholodnii SP-6 periplasmic protein thiol--disulfide oxidoreductase DsbE YP_001790583.1 1645090 D 395495 CDS YP_001790584.1 171058235 6163525 1645613..1646152 1 NC_010524.1 PFAM: cytochrome C biogenesis protein; KEGG: mpt:Mpe_A1209 C-type cytochrome biogenesis protein; cytochrome C biogenesis protein 1646152 6163525 Lcho_1551 Leptothrix cholodnii SP-6 cytochrome C biogenesis protein YP_001790584.1 1645613 D 395495 CDS YP_001790585.1 171058236 6163526 1646197..1647528 1 NC_010524.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mpt:Mpe_A1208 TPR repeat protein; hypothetical protein 1647528 6163526 Lcho_1552 Leptothrix cholodnii SP-6 hypothetical protein YP_001790585.1 1646197 D 395495 CDS YP_001790586.1 171058237 6163527 1647535..1648851 1 NC_010524.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_2667 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin 1648851 6163527 Lcho_1553 Leptothrix cholodnii SP-6 4Fe-4S ferredoxin YP_001790586.1 1647535 D 395495 CDS YP_001790587.1 171058238 6163627 complement(1648884..1649609) 1 NC_010524.1 Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase YpfH 1649609 6163627 Lcho_1554 Leptothrix cholodnii SP-6 esterase YpfH YP_001790587.1 1648884 R 395495 CDS YP_001790588.1 171058239 6163628 complement(1649689..1650783) 1 NC_010524.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rso:RSc0808 probable low specificity L-threonine aldolase protein; threonine aldolase 1650783 6163628 Lcho_1555 Leptothrix cholodnii SP-6 threonine aldolase YP_001790588.1 1649689 R 395495 CDS YP_001790589.1 171058240 6163630 1652053..1653033 1 NC_010524.1 PFAM: Integrase catalytic region; KEGG: bxe:Bxe_B0052 putative transposase; integrase catalytic subunit 1653033 6163630 Lcho_1557 Leptothrix cholodnii SP-6 integrase catalytic subunit YP_001790589.1 1652053 D 395495 CDS YP_001790590.1 171058241 6163631 1653146..1654159 1 NC_010524.1 PFAM: protein of unknown function DUF182; KEGG: rso:RSc1463 hypothetical protein; hypothetical protein 1654159 6163631 Lcho_1558 Leptothrix cholodnii SP-6 hypothetical protein YP_001790590.1 1653146 D 395495 CDS YP_001790591.1 171058242 6163632 complement(1654197..1657115) 1 NC_010524.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 1657115 6163632 Lcho_1559 Leptothrix cholodnii SP-6 glycine dehydrogenase YP_001790591.1 1654197 R 395495 CDS YP_001790592.1 171058243 6163416 complement(1657204..1657578) 1 NC_010524.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: ajs:Ajs_1937 glycine cleavage system H protein; glycine cleavage system H protein 1657578 6163416 Lcho_1560 Leptothrix cholodnii SP-6 glycine cleavage system H protein YP_001790592.1 1657204 R 395495 CDS YP_001790593.1 171058244 6163417 complement(1657680..1658804) 1 NC_010524.1 TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: mpt:Mpe_A1433 glycine cleavage system T protein; glycine cleavage system T protein 1658804 6163417 Lcho_1561 Leptothrix cholodnii SP-6 glycine cleavage system T protein YP_001790593.1 1657680 R 395495 CDS YP_001790594.1 171058245 6163418 complement(1659144..1660157) 1 NC_010524.1 Required for efficient pilin antigenic variation; recombination associated protein 1660157 rdgC 6163418 rdgC Leptothrix cholodnii SP-6 recombination associated protein YP_001790594.1 1659144 R 395495 CDS YP_001790595.1 171058246 6163419 1660307..1661599 1 NC_010524.1 PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_C6632 metallophosphoesterase; metallophosphoesterase 1661599 6163419 Lcho_1563 Leptothrix cholodnii SP-6 metallophosphoesterase YP_001790595.1 1660307 D 395495 CDS YP_001790596.1 171058247 6163420 1661603..1665070 1 NC_010524.1 KEGG: bvi:Bcep1808_5498 hypothetical protein; hypothetical protein 1665070 6163420 Lcho_1564 Leptothrix cholodnii SP-6 hypothetical protein YP_001790596.1 1661603 D 395495 CDS YP_001790597.1 171058248 6163377 complement(1665083..1665469) 1 NC_010524.1 PFAM: PilT protein domain protein; KEGG: gvi:gll3555 hypothetical protein; PilT domain-containing protein 1665469 6163377 Lcho_1565 Leptothrix cholodnii SP-6 PilT domain-containing protein YP_001790597.1 1665083 R 395495 CDS YP_001790598.1 171058249 6163378 complement(1665488..1665715) 1 NC_010524.1 TIGRFAM: prevent-host-death family protein; KEGG: gvi:gsl3556 hypothetical protein; prevent-host-death family protein 1665715 6163378 Lcho_1566 Leptothrix cholodnii SP-6 prevent-host-death family protein YP_001790598.1 1665488 R 395495 CDS YP_001790599.1 171058250 6163379 complement(1665771..1666943) 1 NC_010524.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1666943 tgt 6163379 tgt Leptothrix cholodnii SP-6 queuine tRNA-ribosyltransferase YP_001790599.1 1665771 R 395495 CDS YP_001790600.1 171058251 6163380 1667073..1667219 1 NC_010524.1 hypothetical protein 1667219 6163380 Lcho_1568 Leptothrix cholodnii SP-6 hypothetical protein YP_001790600.1 1667073 D 395495 CDS YP_001790601.1 171058252 6163381 1667315..1669618 1 NC_010524.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pol:Bpro_3047 TonB-dependent siderophore receptor; TonB-dependent receptor 1669618 6163381 Lcho_1569 Leptothrix cholodnii SP-6 TonB-dependent receptor YP_001790601.1 1667315 D 395495 CDS YP_001790602.1 171058253 6163382 1669651..1670346 1 NC_010524.1 PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: pna:Pnap_2559 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 1670346 6163382 Lcho_1570 Leptothrix cholodnii SP-6 2OG-Fe(II) oxygenase YP_001790602.1 1669651 D 395495 CDS YP_001790603.1 171058254 6163270 1670384..1671139 1 NC_010524.1 TIGRFAM: TonB family protein; KEGG: mpt:Mpe_A3718 periplasmic protein/biopolymer transport; TonB family protein 1671139 6163270 Lcho_1571 Leptothrix cholodnii SP-6 TonB family protein YP_001790603.1 1670384 D 395495 CDS YP_001790604.1 171058255 6163271 1671161..1671961 1 NC_010524.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mpt:Mpe_A3719 MotA/TolQ/ExbB proton channel family protein; MotA/TolQ/ExbB proton channel 1671961 6163271 Lcho_1572 Leptothrix cholodnii SP-6 MotA/TolQ/ExbB proton channel YP_001790604.1 1671161 D 395495 CDS YP_001790605.1 171058256 6163272 1672001..1672420 1 NC_010524.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mpt:Mpe_A3720 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1672420 6163272 Lcho_1573 Leptothrix cholodnii SP-6 biopolymer transport protein ExbD/TolR YP_001790605.1 1672001 D 395495 CDS YP_001790606.1 171058257 6163273 1672636..1673295 1 NC_010524.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mes:Meso_0341 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 1673295 6163273 Lcho_1574 Leptothrix cholodnii SP-6 two component LuxR family transcriptional regulator YP_001790606.1 1672636 D 395495 CDS YP_001790607.1 171058258 6163274 complement(1673334..1675667) 1 NC_010524.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: eba:ebA3794 complex two-component hybrid sensor component containing histidine kinase and response receiver domain; histidine kinase 1675667 6163274 Lcho_1575 Leptothrix cholodnii SP-6 histidine kinase YP_001790607.1 1673334 R 395495 CDS YP_001790608.1 171058259 6163275 complement(1675768..1676169) 1 NC_010524.1 KEGG: mpt:Mpe_A3735 cytochrome c-551 precursor; cytochrome c-551 1676169 6163275 Lcho_1576 Leptothrix cholodnii SP-6 cytochrome c-551 YP_001790608.1 1675768 R 395495 CDS YP_001790609.1 171058260 6163014 complement(1676329..1677399) 1 NC_010524.1 TIGRFAM: S-adenosylmethionine--tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: mpt:Mpe_A3736 putative queuosine S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine--tRNA-ribosyltransferase- isomerase 1677399 6163014 Lcho_1577 Leptothrix cholodnii SP-6 S-adenosylmethionine--tRNA-ribosyltransferase- isomerase YP_001790609.1 1676329 R 395495 CDS YP_001790610.1 171058261 6163015 1677472..1677696 1 NC_010524.1 TIGRFAM: addiction module antidote; PFAM: SpoVT/AbrB domain protein; KEGG: rfr:Rfer_3405 transcriptional regulator/antitoxin, MazE; addiction module antidote 1677696 6163015 Lcho_1578 Leptothrix cholodnii SP-6 addiction module antidote YP_001790610.1 1677472 D 395495 CDS YP_001790611.1 171058262 6163016 1677703..1678107 1 NC_010524.1 TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: rfr:Rfer_3404 death-on-curing protein; death-on-curing family protein 1678107 6163016 Lcho_1579 Leptothrix cholodnii SP-6 death-on-curing family protein YP_001790611.1 1677703 D 395495 CDS YP_001790612.1 171058263 6163017 1678184..1680199 1 NC_010524.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1680199 6163017 Lcho_1580 Leptothrix cholodnii SP-6 ATP-dependent DNA helicase RecG YP_001790612.1 1678184 D 395495 CDS YP_001790613.1 171058264 6163018 complement(1680212..1680883) 1 NC_010524.1 PFAM: regulatory protein TetR; KEGG: rfr:Rfer_3529 transcriptional regulator, TetR family; TetR family transcriptional regulator 1680883 6163018 Lcho_1581 Leptothrix cholodnii SP-6 TetR family transcriptional regulator YP_001790613.1 1680212 R 395495 CDS YP_001790614.1 171058265 6163019 1681003..1681980 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0826 putative ATP-binding ABC transporter protein; ABC transporter-like protein 1681980 6163019 Lcho_1582 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001790614.1 1681003 D 395495 CDS YP_001790615.1 171058266 6163002 1681977..1682747 1 NC_010524.1 PFAM: ABC-2 type transporter; KEGG: mpt:Mpe_A0827 putative transmembrane protein; ABC-2 type transporter 1682747 6163002 Lcho_1583 Leptothrix cholodnii SP-6 ABC-2 type transporter YP_001790615.1 1681977 D 395495 CDS YP_001790616.1 171058267 6163003 1682767..1683045 1 NC_010524.1 PFAM: BolA family protein; KEGG: mpt:Mpe_A0828 transcriptional regulator BolA superfamily-like protein; BolA family protein 1683045 6163003 Lcho_1584 Leptothrix cholodnii SP-6 BolA family protein YP_001790616.1 1682767 D 395495 CDS YP_001790617.1 171058268 6163004 1683177..1684442 1 NC_010524.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1684442 6163004 Lcho_1585 Leptothrix cholodnii SP-6 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001790617.1 1683177 D 395495 CDS YP_001790618.1 171058269 6163005 1684528..1685172 1 NC_010524.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 1685172 hisG 6163005 hisG Leptothrix cholodnii SP-6 ATP phosphoribosyltransferase catalytic subunit YP_001790618.1 1684528 D 395495 CDS YP_001790619.1 171058270 6163006 1685212..1686528 1 NC_010524.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 1686528 hisD 6163006 hisD Leptothrix cholodnii SP-6 histidinol dehydrogenase YP_001790619.1 1685212 D 395495 CDS YP_001790620.1 171058271 6163007 1686581..1687708 1 NC_010524.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 1687708 6163007 Lcho_1588 Leptothrix cholodnii SP-6 histidinol-phosphate aminotransferase YP_001790620.1 1686581 D 395495 CDS YP_001790621.1 171058272 6162996 1687705..1688316 1 NC_010524.1 PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: mpt:Mpe_A0833 imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 1688316 6162996 Lcho_1589 Leptothrix cholodnii SP-6 imidazoleglycerol-phosphate dehydratase YP_001790621.1 1687705 D 395495 CDS YP_001790622.1 171058273 6162997 1688399..1689046 1 NC_010524.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 1689046 hisH 6162997 hisH Leptothrix cholodnii SP-6 imidazole glycerol phosphate synthase subunit HisH YP_001790622.1 1688399 D 395495 CDS YP_001790623.1 171058274 6162998 1689100..1689849 1 NC_010524.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1689849 6162998 Lcho_1591 Leptothrix cholodnii SP-6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_001790623.1 1689100 D 395495 CDS YP_001790624.1 171058275 6162999 1689932..1690711 1 NC_010524.1 TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: pna:Pnap_0701 imidazoleglycerol phosphate synthase, cyclase subunit; Imidazole glycerol phosphate synthase cyclase subunit 1690711 6162999 Lcho_1592 Leptothrix cholodnii SP-6 Imidazole glycerol phosphate synthase cyclase subunit YP_001790624.1 1689932 D 395495 CDS YP_001790625.1 171058276 6163000 complement(1690776..1691342) 1 NC_010524.1 PFAM: protein of unknown function DUF1555; KEGG: nmu:Nmul_A2031 hypothetical protein; hypothetical protein 1691342 6163000 Lcho_1593 Leptothrix cholodnii SP-6 hypothetical protein YP_001790625.1 1690776 R 395495 CDS YP_001790626.1 171058277 6163001 complement(1691545..1692093) 1 NC_010524.1 KEGG: ana:all7120 unknown protein; hypothetical protein 1692093 6163001 Lcho_1594 Leptothrix cholodnii SP-6 hypothetical protein YP_001790626.1 1691545 R 395495 CDS YP_001790627.1 171058278 6162614 complement(1692208..1692837) 1 NC_010524.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpt:Mpe_A0581 response regulator protein; two component LuxR family transcriptional regulator 1692837 6162614 Lcho_1595 Leptothrix cholodnii SP-6 two component LuxR family transcriptional regulator YP_001790627.1 1692208 R 395495 CDS YP_001790628.1 171058279 6162615 complement(1692834..1693991) 1 NC_010524.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mpt:Mpe_A0582 signal transduction histidine kinase-like protein; response regulator receiver sensor signal transduction histidine kinase 1693991 6162615 Lcho_1596 Leptothrix cholodnii SP-6 response regulator receiver sensor signal transduction histidine kinase YP_001790628.1 1692834 R 395495 CDS YP_001790629.1 171058280 6162616 1694228..1694689 1 NC_010524.1 KEGG: mpt:Mpe_A0583 hypothetical protein; hypothetical protein 1694689 6162616 Lcho_1597 Leptothrix cholodnii SP-6 hypothetical protein YP_001790629.1 1694228 D 395495 CDS YP_001790630.1 171058281 6162617 1694763..1695125 1 NC_010524.1 PFAM: response regulator receiver; KEGG: mpt:Mpe_A0584 chemotaxis signal transduction protein CheY; response regulator receiver protein 1695125 6162617 Lcho_1598 Leptothrix cholodnii SP-6 response regulator receiver protein YP_001790630.1 1694763 D 395495 CDS YP_001790631.1 171058282 6162618 1695173..1697341 1 NC_010524.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: mpt:Mpe_A0585 chemotaxis protein histidine kinase; CheA signal transduction histidine kinase 1697341 6162618 Lcho_1599 Leptothrix cholodnii SP-6 CheA signal transduction histidine kinase YP_001790631.1 1695173 D 395495 CDS YP_001790632.1 171058283 6162619 1697384..1699168 1 NC_010524.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: aav:Aave_0035 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1699168 6162619 Lcho_1600 Leptothrix cholodnii SP-6 methyl-accepting chemotaxis sensory transducer YP_001790632.1 1697384 D 395495 CDS YP_001790633.1 171058284 6162043 1699184..1700656 1 NC_010524.1 PFAM: chemotaxis sensory transducer; KEGG: aav:Aave_0168 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1700656 6162043 Lcho_1601 Leptothrix cholodnii SP-6 methyl-accepting chemotaxis sensory transducer YP_001790633.1 1699184 D 395495 CDS YP_001790634.1 171058285 6162044 complement(1700657..1703281) 1 NC_010524.1 PFAM: protein of unknown function DUF214; KEGG: mpt:Mpe_A0810 putative transmembrane protein; hypothetical protein 1703281 6162044 Lcho_1602 Leptothrix cholodnii SP-6 hypothetical protein YP_001790634.1 1700657 R 395495 CDS YP_001790635.1 171058286 6162045 1703458..1704294 1 NC_010524.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: mpt:Mpe_A0756 hypothetical protein; extradiol ring-cleavage dioxygenase class III protein subunit B 1704294 6162045 Lcho_1603 Leptothrix cholodnii SP-6 extradiol ring-cleavage dioxygenase class III protein subunit B YP_001790635.1 1703458 D 395495 CDS YP_001790636.1 171058287 6162046 complement(1704312..1705079) 1 NC_010524.1 PFAM: protein of unknown function DUF34; KEGG: mpt:Mpe_A0845 hypothetical protein; hypothetical protein 1705079 6162046 Lcho_1604 Leptothrix cholodnii SP-6 hypothetical protein YP_001790636.1 1704312 R 395495 CDS YP_001790637.1 171058288 6162047 1705117..1706274 1 NC_010524.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: mpt:Mpe_A0844 putative HtrA-like serine protease signal peptide protein; 2-alkenal reductase 1706274 6162047 Lcho_1605 Leptothrix cholodnii SP-6 2-alkenal reductase YP_001790637.1 1705117 D 395495 CDS YP_001790638.1 171058289 6162048 complement(1706281..1707030) 1 NC_010524.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: rfr:Rfer_2958 sec-independent protein translocase TatC; Sec-independent protein translocase subunit TatC 1707030 6162048 Lcho_1606 Leptothrix cholodnii SP-6 Sec-independent protein translocase subunit TatC YP_001790638.1 1706281 R 395495 CDS YP_001790639.1 171058290 6160430 complement(1707108..1707596) 1 NC_010524.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: mpt:Mpe_A0842 sec-independent translocase; sec-independent translocase 1707596 tatB 6160430 tatB Leptothrix cholodnii SP-6 sec-independent translocase YP_001790639.1 1707108 R 395495 CDS YP_001790640.1 171058291 6160431 complement(1707627..1707875) 1 NC_010524.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 1707875 tatA 6160431 tatA Leptothrix cholodnii SP-6 twin arginine translocase protein A YP_001790640.1 1707627 R 395495 CDS YP_001790641.1 171058292 6160432 complement(1707958..1708305) 1 NC_010524.1 PFAM: histidine triad (HIT) protein; KEGG: mpt:Mpe_A0840 hypothetical protein; histidine triad (HIT) protein 1708305 6160432 Lcho_1609 Leptothrix cholodnii SP-6 histidine triad (HIT) protein YP_001790641.1 1707958 R 395495 CDS YP_001790642.1 171058293 6160433 complement(1708324..1708689) 1 NC_010524.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: mpt:Mpe_A0838 phosphoribosyl-ATP pyrophosphatase; phosphoribosyl-ATP diphosphatase 1708689 6160433 Lcho_1610 Leptothrix cholodnii SP-6 phosphoribosyl-ATP diphosphatase YP_001790642.1 1708324 R 395495 CDS YP_001790643.1 171058294 6160434 complement(1708686..1709075) 1 NC_010524.1 PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: aav:Aave_1048 phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 1709075 6160434 Lcho_1611 Leptothrix cholodnii SP-6 phosphoribosyl-AMP cyclohydrolase YP_001790643.1 1708686 R 395495 CDS YP_001790644.1 171058295 6160435 1709211..1710266 1 NC_010524.1 KEGG: mpt:Mpe_A0846 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 1710266 6160435 Lcho_1612 Leptothrix cholodnii SP-6 4-hydroxythreonine-4-phosphate dehydrogenase YP_001790644.1 1709211 D 395495 CDS YP_001790645.1 171058296 6163503 complement(1710281..1711147) 1 NC_010524.1 TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: mpt:Mpe_A3743 UbiA prenyltransferase; 4-hydroxybenzoate polyprenyltransferase 1711147 6163503 Lcho_1613 Leptothrix cholodnii SP-6 4-hydroxybenzoate polyprenyltransferase YP_001790645.1 1710281 R 395495 CDS YP_001790646.1 171058297 6163504 complement(1711177..1713492) 1 NC_010524.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: ccr:CC_0740 sensory box/GGDEF family protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1713492 6163504 Lcho_1614 Leptothrix cholodnii SP-6 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001790646.1 1711177 R 395495 CDS YP_001790647.1 171058298 6163505 complement(1713753..1714688) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A3739 oxidative stress regulatory protein OxyR; LysR family transcriptional regulator 1714688 6163505 Lcho_1615 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001790647.1 1713753 R 395495 CDS YP_001790648.1 171058299 6163506 1714963..1715622 1 NC_010524.1 PFAM: cytochrome c class I; KEGG: mpt:Mpe_A1095 cytochrome c553-like protein; cytochrome c class I 1715622 6163506 Lcho_1616 Leptothrix cholodnii SP-6 cytochrome c class I YP_001790648.1 1714963 D 395495 CDS YP_001790649.1 171058300 6163507 1715764..1716996 1 NC_010524.1 KEGG: mpt:Mpe_A1096 hypothetical protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 1716996 6163507 Lcho_1617 Leptothrix cholodnii SP-6 metal dependent phosphohydrolase YP_001790649.1 1715764 D 395495 CDS YP_001790650.1 171058301 6163508 1717169..1718326 1 NC_010524.1 TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: mpt:Mpe_A3077 flagellar biosynthesis protein; flagellar biosynthetic protein FlhB 1718326 6163508 Lcho_1618 Leptothrix cholodnii SP-6 flagellar biosynthetic protein FlhB YP_001790650.1 1717169 D 395495 CDS YP_001790651.1 171058302 6160490 1718323..1720425 1 NC_010524.1 TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: mpt:Mpe_A3078 flagellar biosynthesis protein; flagellar biosynthesis protein FlhA 1720425 6160490 Lcho_1619 Leptothrix cholodnii SP-6 flagellar biosynthesis protein FlhA YP_001790651.1 1718323 D 395495 CDS YP_001790652.1 171058303 6160491 1720502..1722280 1 NC_010524.1 PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; KEGG: mpt:Mpe_A3079 flagellar GTP-binding protein; GTP-binding signal recognition particle 1722280 6160491 Lcho_1620 Leptothrix cholodnii SP-6 GTP-binding signal recognition particle YP_001790652.1 1720502 D 395495 CDS YP_001790653.1 171058304 6160492 1722303..1723124 1 NC_010524.1 KEGG: mpt:Mpe_A3080 antiactivator of flagellar biosynthesis; protein antiactivator of flagellar biosynthesis 1723124 6160492 Lcho_1621 Leptothrix cholodnii SP-6 protein antiactivator of flagellar biosynthesis YP_001790653.1 1722303 D 395495 CDS YP_001790654.1 171058305 6160493 1723142..1723858 1 NC_010524.1 KEGG: mpt:Mpe_A3081 DNA-directed RNA polymerase specialized sigma subunit; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; RNA polymerase sigma 28 subunit FliA/WhiG 1723858 6160493 Lcho_1622 Leptothrix cholodnii SP-6 RNA polymerase sigma 28 subunit FliA/WhiG YP_001790654.1 1723142 D 395495 CDS YP_001790655.1 171058306 6160494 1723995..1725359 1 NC_010524.1 PFAM: chemotaxis sensory transducer; KEGG: mpt:Mpe_A3082 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1725359 6160494 Lcho_1623 Leptothrix cholodnii SP-6 methyl-accepting chemotaxis sensory transducer YP_001790655.1 1723995 D 395495 CDS YP_001790656.1 171058307 6160495 complement(1725394..1725669) 1 NC_010524.1 KEGG: pol:Bpro_3703 hypothetical protein; hypothetical protein 1725669 6160495 Lcho_1624 Leptothrix cholodnii SP-6 hypothetical protein YP_001790656.1 1725394 R 395495 CDS YP_001790657.1 171058308 6160957 complement(1725793..1726275) 1 NC_010524.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: aav:Aave_0314 hemerythrin-like metal-binding protein; hemerythrin-like metal-binding protein 1726275 6160957 Lcho_1625 Leptothrix cholodnii SP-6 hemerythrin-like metal-binding protein YP_001790657.1 1725793 R 395495 CDS YP_001790658.1 171058309 6160958 complement(1726346..1727629) 1 NC_010524.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: mpt:Mpe_A3745 putative glutamic dehyrogenase; Glu/Leu/Phe/Val dehydrogenase 1727629 6160958 Lcho_1626 Leptothrix cholodnii SP-6 Glu/Leu/Phe/Val dehydrogenase YP_001790658.1 1726346 R 395495 CDS YP_001790659.1 171058310 6160959 complement(1727760..1728575) 1 NC_010524.1 KEGG: mpt:Mpe_A3746 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase 1728575 6160959 Lcho_1627 Leptothrix cholodnii SP-6 pyrroline-5-carboxylate reductase YP_001790659.1 1727760 R 395495 CDS YP_001790660.1 171058311 6160960 complement(1728624..1731713) 1 NC_010524.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 1731713 6160960 Lcho_1628 Leptothrix cholodnii SP-6 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_001790660.1 1728624 R 395495 CDS YP_001790661.1 171058312 6160961 1731849..1732328 1 NC_010524.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: mpt:Mpe_A3749 putative leucine-responsive regulatory protein; AsnC family transcriptional regulator 1732328 6160961 Lcho_1629 Leptothrix cholodnii SP-6 AsnC family transcriptional regulator YP_001790661.1 1731849 D 395495 CDS YP_001790662.1 171058313 6160962 complement(1732360..1733049) 1 NC_010524.1 PFAM: alanine racemase domain protein; KEGG: bmu:Bmul_2655 alanine racemase domain protein; alanine racemase domain-containing protein 1733049 6160962 Lcho_1630 Leptothrix cholodnii SP-6 alanine racemase domain-containing protein YP_001790662.1 1732360 R 395495 CDS YP_001790663.1 171058314 6163453 1733111..1734154 1 NC_010524.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: mpt:Mpe_A3760 pili biogenesis ATPase; twitching motility protein 1734154 6163453 Lcho_1631 Leptothrix cholodnii SP-6 twitching motility protein YP_001790663.1 1733111 D 395495 CDS YP_001790664.1 171058315 6163454 1734180..1735316 1 NC_010524.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: mpt:Mpe_A3762 pili biogenesis ATPase; twitching motility protein 1735316 6163454 Lcho_1632 Leptothrix cholodnii SP-6 twitching motility protein YP_001790664.1 1734180 D 395495 CDS YP_001790665.1 171058316 6163455 1735321..1737231 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; KEGG: bbr:BB2739 probable two-component sensor histidine kinase; putative signal transduction histidine kinase 1737231 6163455 Lcho_1633 Leptothrix cholodnii SP-6 putative signal transduction histidine kinase YP_001790665.1 1735321 D 395495 CDS YP_001790666.1 171058317 6163456 complement(1737228..1737938) 1 NC_010524.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpt:Mpe_A3237 response regulator; two component LuxR family transcriptional regulator 1737938 6163456 Lcho_1634 Leptothrix cholodnii SP-6 two component LuxR family transcriptional regulator YP_001790666.1 1737228 R 395495 CDS YP_001790667.1 171058318 6163457 1738128..1739582 1 NC_010524.1 KEGG: stp:Strop_1435 hypothetical protein; hypothetical protein 1739582 6163457 Lcho_1635 Leptothrix cholodnii SP-6 hypothetical protein YP_001790667.1 1738128 D 395495 CDS YP_001790668.1 171058319 6163458 1739656..1740549 1 NC_010524.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: aav:Aave_0633 3-hydroxyisobutyrate dehydrogenase; 6-phosphogluconate dehydrogenase 1740549 6163458 Lcho_1636 Leptothrix cholodnii SP-6 6-phosphogluconate dehydrogenase YP_001790668.1 1739656 D 395495 CDS YP_001790669.1 171058320 6161284 complement(1740631..1741320) 1 NC_010524.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: ajs:Ajs_0416 transport-associated; transport-associated 1741320 6161284 Lcho_1637 Leptothrix cholodnii SP-6 transport-associated YP_001790669.1 1740631 R 395495 CDS YP_001790670.1 171058321 6161285 complement(1741317..1741910) 1 NC_010524.1 TIGRFAM: phosphoheptose isomerase; KEGG: mpt:Mpe_A3765 phosphoheptose isomerase; phosphoheptose isomerase 1741910 6161285 Lcho_1638 Leptothrix cholodnii SP-6 phosphoheptose isomerase YP_001790670.1 1741317 R 395495 CDS YP_001790671.1 171058322 6161286 complement(1741947..1742357) 1 NC_010524.1 PFAM: protein of unknown function UPF0102; KEGG: aav:Aave_0630 protein of unknown function UPF0102; hypothetical protein 1742357 6161286 Lcho_1639 Leptothrix cholodnii SP-6 hypothetical protein YP_001790671.1 1741947 R 395495 CDS YP_001790672.1 171058323 6161287 1742374..1743438 1 NC_010524.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mpt:Mpe_A3767 hypothetical protein; uroporphyrin-III C/tetrapyrrole methyltransferase 1743438 6161287 Lcho_1640 Leptothrix cholodnii SP-6 uroporphyrin-III C/tetrapyrrole methyltransferase YP_001790672.1 1742374 D 395495 CDS YP_001790673.1 171058324 6161288 1743563..1745830 1 NC_010524.1 KEGG: mpt:Mpe_A0661 signal transduction protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 1745830 6161288 Lcho_1641 Leptothrix cholodnii SP-6 PAS/PAC sensor-containing diguanylate cyclase YP_001790673.1 1743563 D 395495 CDS YP_001790674.1 171058325 6161289 complement(1745840..1747870) 1 NC_010524.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: mpt:Mpe_A2132 oligopeptidase A; oligopeptidase A 1747870 6161289 Lcho_1642 Leptothrix cholodnii SP-6 oligopeptidase A YP_001790674.1 1745840 R 395495 CDS YP_001790675.1 171058326 6161676 complement(1747867..1748730) 1 NC_010524.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1748730 6161676 Lcho_1643 Leptothrix cholodnii SP-6 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_001790675.1 1747867 R 395495 CDS YP_001790676.1 171058327 6161677 complement(1748835..1749458) 1 NC_010524.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mpt:Mpe_A2130 response regulator protein; two component LuxR family transcriptional regulator 1749458 6161677 Lcho_1644 Leptothrix cholodnii SP-6 two component LuxR family transcriptional regulator YP_001790676.1 1748835 R 395495 CDS YP_001790677.1 171058328 6161678 complement(1749455..1751887) 1 NC_010524.1 KEGG: mpt:Mpe_A2129 putative two-component transmembrane sensor histidine kinase transcription regulator protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 1751887 6161678 Lcho_1645 Leptothrix cholodnii SP-6 PAS/PAC sensor signal transduction histidine kinase YP_001790677.1 1749455 R 395495 CDS YP_001790678.1 171058329 6161679 1752209..1754920 1 NC_010524.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 1754920 aceE 6161679 aceE Leptothrix cholodnii SP-6 pyruvate dehydrogenase subunit E1 YP_001790678.1 1752209 D 395495 CDS YP_001790679.1 171058330 6161680 1754941..1756605 1 NC_010524.1 KEGG: mpt:Mpe_A2127 dihydrolipoamide S-succinyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 1756605 6161680 Lcho_1647 Leptothrix cholodnii SP-6 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase YP_001790679.1 1754941 D 395495 CDS YP_001790680.1 171058331 6161681 1756624..1758447 1 NC_010524.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ajs:Ajs_2096 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 1758447 6161681 Lcho_1648 Leptothrix cholodnii SP-6 dihydrolipoamide dehydrogenase YP_001790680.1 1756624 D 395495 CDS YP_001790681.1 171058332 6161509 complement(1758557..1759558) 1 NC_010524.1 PFAM: beta-lactamase domain protein; KEGG: mpt:Mpe_A2919 beta-lactamase related protein; beta-lactamase domain-containing protein 1759558 6161509 Lcho_1649 Leptothrix cholodnii SP-6 beta-lactamase domain-containing protein YP_001790681.1 1758557 R 395495 CDS YP_001790682.1 171058333 6161510 1759677..1760312 1 NC_010524.1 KEGG: mpt:Mpe_A2133 hypothetical protein; hypothetical protein 1760312 6161510 Lcho_1650 Leptothrix cholodnii SP-6 hypothetical protein YP_001790682.1 1759677 D 395495 CDS YP_001790683.1 171058334 6161511 1760323..1761243 1 NC_010524.1 PFAM: ApbE family lipoprotein; KEGG: abo:ABO_2002 thiamine biosynthesis lipoprotein, putative; ApbE family lipoprotein 1761243 6161511 Lcho_1651 Leptothrix cholodnii SP-6 ApbE family lipoprotein YP_001790683.1 1760323 D 395495 CDS YP_001790684.1 171058335 6161512 complement(1761387..1763612) 1 NC_010524.1 PFAM: protein of unknown function DUF839; KEGG: pol:Bpro_1725 twin-arginine translocation pathway signal; hypothetical protein 1763612 6161512 Lcho_1652 Leptothrix cholodnii SP-6 hypothetical protein YP_001790684.1 1761387 R 395495 CDS YP_001790685.1 171058336 6161513 1763896..1764687 1 NC_010524.1 PFAM: transcriptional regulator domain protein; KEGG: rme:Rmet_2180 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1764687 6161513 Lcho_1653 Leptothrix cholodnii SP-6 two component transcriptional regulator YP_001790685.1 1763896 D 395495 CDS YP_001790686.1 171058337 6161514 1764862..1765866 1 NC_010524.1 TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: dar:Daro_3562 phosphate binding protein; phosphate-binding protein 1765866 6161514 Lcho_1654 Leptothrix cholodnii SP-6 phosphate-binding protein YP_001790686.1 1764862 D 395495 CDS YP_001790687.1 171058338 6161551 1765990..1766925 1 NC_010524.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: net:Neut_0238 phosphate ABC transporter, inner membrane subunit PstC; phosphate ABC transporter permease 1766925 6161551 Lcho_1655 Leptothrix cholodnii SP-6 phosphate ABC transporter permease YP_001790687.1 1765990 D 395495 CDS YP_001790688.1 171058339 6161552 1766928..1767848 1 NC_010524.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eba:ebA4829 phosphate ABC transporter, permease protein; phosphate ABC transporter permease 1767848 6161552 Lcho_1656 Leptothrix cholodnii SP-6 phosphate ABC transporter permease YP_001790688.1 1766928 D 395495 CDS YP_001790689.1 171058340 6161553 1767910..1768704 1 NC_010524.1 KEGG: mfa:Mfla_0792 phosphate transport system permease protein 1; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase 1768704 6161553 Lcho_1657 Leptothrix cholodnii SP-6 phosphate ABC transporter ATPase YP_001790689.1 1767910 D 395495 CDS YP_001790690.1 171058341 6161554 1768748..1769455 1 NC_010524.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: mpt:Mpe_A1276 putative phosphate transport system protein; phosphate uptake regulator PhoU 1769455 6161554 Lcho_1658 Leptothrix cholodnii SP-6 phosphate uptake regulator PhoU YP_001790690.1 1768748 D 395495 CDS YP_001790691.1 171058342 6161555 1769489..1770226 1 NC_010524.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mpt:Mpe_A1277 phosphate regulon two-component system response regulator; two component transcriptional regulator 1770226 6161555 Lcho_1659 Leptothrix cholodnii SP-6 two component transcriptional regulator YP_001790691.1 1769489 D 395495 CDS YP_001790692.1 171058343 6161556 1770355..1770666 1 NC_010524.1 hypothetical protein 1770666 6161556 Lcho_1660 Leptothrix cholodnii SP-6 hypothetical protein YP_001790692.1 1770355 D 395495 CDS YP_001790693.1 171058344 6162134 1770679..1771323 1 NC_010524.1 PFAM: nitroreductase; KEGG: rfr:Rfer_3637 nitroreductase; nitroreductase 1771323 6162134 Lcho_1661 Leptothrix cholodnii SP-6 nitroreductase YP_001790693.1 1770679 D 395495 CDS YP_001790694.1 171058345 6162135 complement(1771420..1771659) 1 NC_010524.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mpt:Mpe_A2463 putative cold shock protein; cold-shock DNA-binding domain-containing protein 1771659 6162135 Lcho_1662 Leptothrix cholodnii SP-6 cold-shock DNA-binding domain-containing protein YP_001790694.1 1771420 R 395495 CDS YP_001790695.1 171058346 6162136 1771850..1772197 1 NC_010524.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: mpt:Mpe_A2462 hypothetical protein; ATP-dependent Clp protease adaptor protein ClpS 1772197 6162136 Lcho_1663 Leptothrix cholodnii SP-6 ATP-dependent Clp protease adaptor protein ClpS YP_001790695.1 1771850 D 395495 CDS YP_001790696.1 171058347 6162137 1772194..1774494 1 NC_010524.1 KEGG: mpt:Mpe_A2461 putative ATP-dependent clp protease ATP-binding subunit; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA 1774494 6162137 Lcho_1664 Leptothrix cholodnii SP-6 ATP-dependent Clp protease ATP-binding protein ClpA YP_001790696.1 1772194 D 395495 CDS YP_001790697.1 171058348 6162138 complement(1774570..1775358) 1 NC_010524.1 PFAM: protein of unknown function DUF980; KEGG: mpt:Mpe_A2460 hypothetical protein; hypothetical protein 1775358 6162138 Lcho_1665 Leptothrix cholodnii SP-6 hypothetical protein YP_001790697.1 1774570 R 395495 CDS YP_001790698.1 171058349 6162139 complement(1775352..1776200) 1 NC_010524.1 TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; KEGG: ajs:Ajs_1619 UDP-2,3-diacylglucosamine hydrolase; UDP-2,3-diacylglucosamine hydrolase 1776200 6162139 Lcho_1666 Leptothrix cholodnii SP-6 UDP-2,3-diacylglucosamine hydrolase YP_001790698.1 1775352 R 395495 CDS YP_001790699.1 171058350 6163732 complement(1776197..1776703) 1 NC_010524.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mpt:Mpe_A2458 peptidyl-prolyl cis-trans isomerase B; cyclophilin type peptidyl-prolyl cis-trans isomerase 1776703 6163732 Lcho_1667 Leptothrix cholodnii SP-6 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001790699.1 1776197 R 395495 CDS YP_001790700.1 171058351 6163733 complement(1776706..1777275) 1 NC_010524.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mpt:Mpe_A2457 peptidylprolyl isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 1777275 6163733 Lcho_1668 Leptothrix cholodnii SP-6 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001790700.1 1776706 R 395495 CDS YP_001790701.1 171058352 6163734 complement(1777272..1779200) 1 NC_010524.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rfr:Rfer_1347 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 1779200 6163734 Lcho_1669 Leptothrix cholodnii SP-6 ErfK/YbiS/YcfS/YnhG family protein YP_001790701.1 1777272 R 395495 CDS YP_001790702.1 171058353 6163735 1779428..1780801 1 NC_010524.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1780801 cysS 6163735 cysS Leptothrix cholodnii SP-6 cysteinyl-tRNA synthetase YP_001790702.1 1779428 D 395495 CDS YP_001790703.1 171058354 6163736 1780816..1781466 1 NC_010524.1 PFAM: HhH-GPD family protein; KEGG: mpt:Mpe_A2455 DNA-3-methyladenine glycosylase; HhH-GPD family protein 1781466 6163736 Lcho_1671 Leptothrix cholodnii SP-6 HhH-GPD family protein YP_001790703.1 1780816 D 395495 CDS YP_001790704.1 171058355 6163737 1781517..1782485 1 NC_010524.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit; KEGG: mpt:Mpe_A2454 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 1782485 6163737 Lcho_1672 Leptothrix cholodnii SP-6 acetyl-CoA carboxylase, carboxyl transferase subunit alpha YP_001790704.1 1781517 D 395495 CDS YP_001790705.1 171058356 6164088 1782563..1783936 1 NC_010524.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; KEGG: mpt:Mpe_A2453 putative cell cycle protein; tRNA(Ile)-lysidine synthetase 1783936 6164088 Lcho_1673 Leptothrix cholodnii SP-6 tRNA(Ile)-lysidine synthetase YP_001790705.1 1782563 D 395495 CDS YP_001790706.1 171058357 6164089 1784025..1785293 1 NC_010524.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1785293 6164089 Lcho_1674 Leptothrix cholodnii SP-6 aspartate kinase YP_001790706.1 1784025 D 395495 CDS YP_001790707.1 171058358 6164091 1785560..1786984 1 NC_010524.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 1786984 6164091 Lcho_1675 Leptothrix cholodnii SP-6 isopropylmalate isomerase large subunit YP_001790707.1 1785560 D 395495 CDS YP_001790708.1 171058359 6164092 1786997..1787644 1 NC_010524.1 KEGG: pol:Bpro_3609 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase small subunit 1787644 6164092 Lcho_1676 Leptothrix cholodnii SP-6 3-isopropylmalate dehydratase small subunit YP_001790708.1 1786997 D 395495 CDS YP_001790709.1 171058360 6163944 1787677..1788780 1 NC_010524.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 1788780 6163944 Lcho_1677 Leptothrix cholodnii SP-6 3-isopropylmalate dehydrogenase YP_001790709.1 1787677 D 395495 CDS YP_001790710.1 171058361 6163945 1788876..1790003 1 NC_010524.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 1790003 6163945 Lcho_1678 Leptothrix cholodnii SP-6 aspartate-semialdehyde dehydrogenase YP_001790710.1 1788876 D 395495 CDS YP_001790711.1 171058362 6163946 1790265..1792916 1 NC_010524.1 KEGG: mpt:Mpe_A2160 putative transmembrane protein; putative transmembrane protein 1792916 6163946 Lcho_1679 Leptothrix cholodnii SP-6 putative transmembrane protein YP_001790711.1 1790265 D 395495 CDS YP_001790712.1 171058363 6163947 1792948..1793736 1 NC_010524.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1793736 truA 6163947 truA Leptothrix cholodnii SP-6 tRNA pseudouridine synthase A YP_001790712.1 1792948 D 395495 CDS YP_001790713.1 171058364 6163948 1793748..1794410 1 NC_010524.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: mpt:Mpe_A2158 phosphoribosylanthranilate isomerase; phosphoribosylanthranilate isomerase 1794410 6163948 Lcho_1681 Leptothrix cholodnii SP-6 phosphoribosylanthranilate isomerase YP_001790713.1 1793748 D 395495 CDS YP_001790714.1 171058365 6163949 1794428..1795714 1 NC_010524.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1795714 6163949 Lcho_1682 Leptothrix cholodnii SP-6 tryptophan synthase subunit beta YP_001790714.1 1794428 D 395495 CDS YP_001790715.1 171058366 6162478 1795711..1796526 1 NC_010524.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1796526 trpA 6162478 trpA Leptothrix cholodnii SP-6 tryptophan synthase subunit alpha YP_001790715.1 1795711 D 395495 CDS YP_001790716.1 171058367 6162479 1796523..1797395 1 NC_010524.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: mpt:Mpe_A2155 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; acetyl-CoA carboxylase, carboxyl transferase subunit beta 1797395 6162479 Lcho_1684 Leptothrix cholodnii SP-6 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_001790716.1 1796523 D 395495 CDS YP_001790717.1 171058368 6162480 1797487..1798800 1 NC_010524.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mpt:Mpe_A2154 bifunctional protein: folylpolyglutamate synthase and dihydrofolate synthase; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 1798800 6162480 Lcho_1685 Leptothrix cholodnii SP-6 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_001790717.1 1797487 D 395495 CDS YP_001790718.1 171058369 6162481 1798978..1799727 1 NC_010524.1 PFAM: Sporulation domain protein; KEGG: mpt:Mpe_A2153 DedD protein; sporulation domain-containing protein 1799727 6162481 Lcho_1686 Leptothrix cholodnii SP-6 sporulation domain-containing protein YP_001790718.1 1798978 D 395495 CDS YP_001790719.1 171058370 6162482 1799739..1800248 1 NC_010524.1 PFAM: Colicin V production protein; KEGG: mpt:Mpe_A2152 colicin V production protein; colicin V production protein 1800248 6162482 Lcho_1687 Leptothrix cholodnii SP-6 colicin V production protein YP_001790719.1 1799739 D 395495 CDS YP_001790720.1 171058371 6162483 1800338..1801855 1 NC_010524.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1801855 6162483 Lcho_1688 Leptothrix cholodnii SP-6 amidophosphoribosyltransferase YP_001790720.1 1800338 D 395495 CDS YP_001790721.1 171058372 6161546 1801867..1803108 1 NC_010524.1 KEGG: mpt:Mpe_A2150 cystathionine gamma-synthase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-succinylhomoserine sulfhydrylase 1803108 6161546 Lcho_1689 Leptothrix cholodnii SP-6 O-succinylhomoserine sulfhydrylase YP_001790721.1 1801867 D 395495 CDS YP_001790722.1 171058373 6161547 1803113..1804519 1 NC_010524.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1804519 gltX 6161547 gltX Leptothrix cholodnii SP-6 glutamyl-tRNA synthetase YP_001790722.1 1803113 D 395495 CDS YP_001790723.1 171058374 6163705 complement(1805158..1806150) 1 NC_010524.1 KEGG: eba:ebA584 glucokinase; TIGRFAM: glucokinase; PFAM: Glucokinase; glucokinase 1806150 6163705 Lcho_1691 Leptothrix cholodnii SP-6 glucokinase YP_001790723.1 1805158 R 395495 CDS YP_001790724.1 171058375 6163200 complement(1806315..1807382) 1 NC_010524.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bte:BTH_I1556 maltose ABC transporter, ATP-binding protein, putative; ABC transporter-like protein 1807382 6163200 Lcho_1692 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001790724.1 1806315 R 395495 CDS YP_001790725.1 171058376 6163201 complement(1807389..1808237) 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pna:Pnap_3692 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1808237 6163201 Lcho_1693 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001790725.1 1807389 R 395495 CDS YP_001790726.1 171058377 6163202 complement(1808250..1809137) 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_1096 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1809137 6163202 Lcho_1694 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001790726.1 1808250 R 395495 CDS YP_001790727.1 171058378 6163203 complement(1809315..1810577) 1 NC_010524.1 PFAM: extracellular solute-binding protein family 1; KEGG: pna:Pnap_3689 extracellular solute-binding protein, family 1; extracellular solute-binding protein 1810577 6163203 Lcho_1695 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001790727.1 1809315 R 395495 CDS YP_001790728.1 171058379 6163204 complement(1810717..1812237) 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: rfr:Rfer_1092 periplasmic sensor signal transduction histidine kinase; histidine kinase 1812237 6163204 Lcho_1696 Leptothrix cholodnii SP-6 histidine kinase YP_001790728.1 1810717 R 395495 CDS YP_001790729.1 171058380 6162764 complement(1812271..1812969) 1 NC_010524.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dar:Daro_0429 response regulator receiver:transcriptional regulatory protein, C-terminal; two component transcriptional regulator 1812969 6162764 Lcho_1697 Leptothrix cholodnii SP-6 two component transcriptional regulator YP_001790729.1 1812271 R 395495 CDS YP_001790730.1 171058381 6162765 complement(1812987..1813784) 1 NC_010524.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aav:Aave_3255 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1813784 6162765 Lcho_1698 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001790730.1 1812987 R 395495 CDS YP_001790731.1 171058382 6162766 1814127..1814678 1 NC_010524.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 1814678 6162766 Lcho_1699 Leptothrix cholodnii SP-6 hypothetical protein YP_001790731.1 1814127 D 395495 CDS YP_001790732.1 171058383 6162767 1814675..1816153 1 NC_010524.1 KEGG: mpt:Mpe_A1922 putative N utilization substance transcription regulator protein; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; NusA domain protein; SMART: KH domain protein; NusA antitermination factor 1816153 6162767 Lcho_1700 Leptothrix cholodnii SP-6 NusA antitermination factor YP_001790732.1 1814675 D 395495 CDS YP_001790733.1 171058384 6162768 1816206..1819181 1 NC_010524.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1819181 infB 6162768 infB Leptothrix cholodnii SP-6 translation initiation factor IF-2 YP_001790733.1 1816206 D 395495 CDS YP_001790734.1 171058385 6162769 1819269..1819640 1 NC_010524.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1819640 rbfA 6162769 rbfA Leptothrix cholodnii SP-6 ribosome-binding factor A YP_001790734.1 1819269 D 395495 CDS YP_001790735.1 171058386 6162647 1819668..1820687 1 NC_010524.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: mpt:Mpe_A1919 pseudouridylate synthase; tRNA pseudouridine synthase B 1820687 6162647 Lcho_1703 Leptothrix cholodnii SP-6 tRNA pseudouridine synthase B YP_001790735.1 1819668 D 395495 CDS YP_001790736.1 171058387 6162648 1820684..1822504 1 NC_010524.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: aav:Aave_3380 GTP-binding protein TypA; GTP-binding protein TypA 1822504 6162648 Lcho_1704 Leptothrix cholodnii SP-6 GTP-binding protein TypA YP_001790736.1 1820684 D 395495 CDS YP_001790737.1 171058388 6162649 1822594..1823511 1 NC_010524.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mpt:Mpe_A1917 hypothetical protein; hypothetical protein 1823511 6162649 Lcho_1705 Leptothrix cholodnii SP-6 hypothetical protein YP_001790737.1 1822594 D 395495 CDS YP_001790738.1 171058389 6162650 complement(1823584..1824297) 1 NC_010524.1 KEGG: sru:SRU_1591 hypothetical protein; hypothetical protein 1824297 6162650 Lcho_1706 Leptothrix cholodnii SP-6 hypothetical protein YP_001790738.1 1823584 R 395495 CDS YP_001790739.1 171058390 6162651 complement(1824399..1825538) 1 NC_010524.1 TIGRFAM: pyridine nucleotide-disulfide oxidoreductase family protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsh:Rsph17029_3291 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulfide oxidoreductase family protein 1825538 6162651 Lcho_1707 Leptothrix cholodnii SP-6 pyridine nucleotide-disulfide oxidoreductase family protein YP_001790739.1 1824399 R 395495 CDS YP_001790740.1 171058391 6162652 complement(1825535..1826389) 1 NC_010524.1 PFAM: protein of unknown function DUF547; KEGG: mmw:Mmwyl1_0177 protein of unknown function DUF547; hypothetical protein 1826389 6162652 Lcho_1708 Leptothrix cholodnii SP-6 hypothetical protein YP_001790740.1 1825535 R 395495 CDS YP_001790741.1 171058392 6162234 complement(1826386..1828548) 1 NC_010524.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SNARE associated Golgi protein; KEGG: rfr:Rfer_1621 pyridine nucleotide-disulphide oxidoreductase dimerisation protein; hypothetical protein 1828548 6162234 Lcho_1709 Leptothrix cholodnii SP-6 hypothetical protein YP_001790741.1 1826386 R 395495 CDS YP_001790742.1 171058393 6162235 complement(1828548..1828646) 1 NC_010524.1 hypothetical protein 1828646 6162235 Lcho_1710 Leptothrix cholodnii SP-6 hypothetical protein YP_001790742.1 1828548 R 395495 CDS YP_001790743.1 171058394 6162236 1828773..1829882 1 NC_010524.1 PFAM: protein of unknown function DUF140; KEGG: sdn:Sden_0670 protein of unknown function DUF140; hypothetical protein 1829882 6162236 Lcho_1711 Leptothrix cholodnii SP-6 hypothetical protein YP_001790743.1 1828773 D 395495 CDS YP_001790744.1 171058395 6162237 1829886..1830644 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_2415 ABC transporter related; ABC transporter-like protein 1830644 6162237 Lcho_1712 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001790744.1 1829886 D 395495 CDS YP_001790745.1 171058396 6162238 1830641..1831711 1 NC_010524.1 PFAM: Mammalian cell entry related domain protein; KEGG: sfu:Sfum_2416 mammalian cell entry related domain protein; hypothetical protein 1831711 6162238 Lcho_1713 Leptothrix cholodnii SP-6 hypothetical protein YP_001790745.1 1830641 D 395495 CDS YP_001790746.1 171058397 6162239 1831769..1832467 1 NC_010524.1 KEGG: sfu:Sfum_2417 protein of unknown function DUF330; hypothetical protein 1832467 6162239 Lcho_1714 Leptothrix cholodnii SP-6 hypothetical protein YP_001790746.1 1831769 D 395495 CDS YP_001790747.1 171058398 6162809 complement(1832510..1833442) 1 NC_010524.1 PFAM: Patatin; KEGG: rfr:Rfer_0361 patatin; patatin 1833442 6162809 Lcho_1715 Leptothrix cholodnii SP-6 patatin YP_001790747.1 1832510 R 395495 CDS YP_001790748.1 171058399 6162810 complement(1833439..1834074) 1 NC_010524.1 KEGG: hne:HNE_0662 YHS domain protein; hypothetical protein 1834074 6162810 Lcho_1716 Leptothrix cholodnii SP-6 hypothetical protein YP_001790748.1 1833439 R 395495 CDS YP_001790749.1 171058400 6162811 complement(1834071..1835477) 1 NC_010524.1 KEGG: aeh:Mlg_0907 hypothetical protein; hypothetical protein 1835477 6162811 Lcho_1717 Leptothrix cholodnii SP-6 hypothetical protein YP_001790749.1 1834071 R 395495 CDS YP_001790750.1 171058401 6162812 complement(1835474..1836142) 1 NC_010524.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pol:Bpro_2748 methyltransferase type 11; type 11 methyltransferase 1836142 6162812 Lcho_1718 Leptothrix cholodnii SP-6 type 11 methyltransferase YP_001790750.1 1835474 R 395495 CDS YP_001790751.1 171058402 6162813 complement(1836152..1836502) 1 NC_010524.1 PFAM: small multidrug resistance protein; KEGG: mac:MA1348 multidrug efflux pump; small multidrug resistance protein 1836502 6162813 Lcho_1719 Leptothrix cholodnii SP-6 small multidrug resistance protein YP_001790751.1 1836152 R 395495 CDS YP_001790752.1 171058403 6162814 complement(1836524..1837360) 1 NC_010524.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_1618 phosphonate uptake transporter; phosphonate ABC transporter inner membrane subunit 1837360 6162814 Lcho_1720 Leptothrix cholodnii SP-6 phosphonate ABC transporter inner membrane subunit YP_001790752.1 1836524 R 395495 CDS YP_001790753.1 171058404 6162496 complement(1837377..1838225) 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2238 phosphonate uptake transporter; binding-protein-dependent transport system inner membrane protein 1838225 6162496 Lcho_1721 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001790753.1 1837377 R 395495 CDS YP_001790754.1 171058405 6162497 complement(1838222..1839061) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_2237 ABC transporter related; ABC transporter-like protein 1839061 6162497 Lcho_1722 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001790754.1 1838222 R 395495 CDS YP_001790755.1 171058406 6162498 complement(1839079..1839942) 1 NC_010524.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: rfr:Rfer_1615 phosphonate-binding periplasmic protein; phosphonate ABC transporter periplasmic phosphonate-binding protein 1839942 6162498 Lcho_1723 Leptothrix cholodnii SP-6 phosphonate ABC transporter periplasmic phosphonate-binding protein YP_001790755.1 1839079 R 395495 CDS YP_001790756.1 171058407 6162499 1840119..1841105 1 NC_010524.1 KEGG: rme:Rmet_2566 putative uncharacterized conserved protein; hypothetical protein 1841105 6162499 Lcho_1724 Leptothrix cholodnii SP-6 hypothetical protein YP_001790756.1 1840119 D 395495 CDS YP_001790757.1 171058408 6162500 complement(1841115..1842344) 1 NC_010524.1 PFAM: protein of unknown function DUF323; KEGG: pol:Bpro_1756 protein of unknown function DUF323; hypothetical protein 1842344 6162500 Lcho_1725 Leptothrix cholodnii SP-6 hypothetical protein YP_001790757.1 1841115 R 395495 CDS YP_001790758.1 171058409 6162501 1842363..1843364 1 NC_010524.1 PFAM: glycosyl transferase group 1; KEGG: rfr:Rfer_1614 glycosyl transferase, group 1; group 1 glycosyl transferase 1843364 6162501 Lcho_1726 Leptothrix cholodnii SP-6 group 1 glycosyl transferase YP_001790758.1 1842363 D 395495 CDS YP_001790759.1 171058410 6161967 1843379..1844446 1 NC_010524.1 catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase 1844446 6161967 Lcho_1727 Leptothrix cholodnii SP-6 selenophosphate synthetase YP_001790759.1 1843379 D 395495 CDS YP_001790760.1 171058411 6161968 complement(1844471..1844692) 1 NC_010524.1 KEGG: dar:Daro_2471 hypothetical protein; hypothetical protein 1844692 6161968 Lcho_1728 Leptothrix cholodnii SP-6 hypothetical protein YP_001790760.1 1844471 R 395495 CDS YP_001790761.1 171058412 6161969 1844917..1845945 1 NC_010524.1 TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: mpt:Mpe_A1916 tRNA-dihydrouridine synthase A; tRNA-dihydrouridine synthase A 1845945 6161969 Lcho_1729 Leptothrix cholodnii SP-6 tRNA-dihydrouridine synthase A YP_001790761.1 1844917 D 395495 CDS YP_001790762.1 171058413 6161970 1846077..1847300 1 NC_010524.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pau:PA14_50060 hypothetical protein; diguanylate cyclase 1847300 6161970 Lcho_1730 Leptothrix cholodnii SP-6 diguanylate cyclase YP_001790762.1 1846077 D 395495 CDS YP_001790763.1 171058414 6161971 1847304..1849217 1 NC_010524.1 KEGG: nmu:Nmul_A0828 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 1849217 6161971 Lcho_1731 Leptothrix cholodnii SP-6 PAS/PAC sensor-containing diguanylate cyclase YP_001790763.1 1847304 D 395495 CDS YP_001790764.1 171058415 6161972 complement(1849199..1850122) 1 NC_010524.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mpt:Mpe_A1915 putative transmembrane protein; hypothetical protein 1850122 6161972 Lcho_1732 Leptothrix cholodnii SP-6 hypothetical protein YP_001790764.1 1849199 R 395495 CDS YP_001790765.1 171058416 6161233 complement(1850127..1850966) 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A1906 putrescine transport system permease protein; ornithine carbamoyltransferase 1850966 6161233 Lcho_1733 Leptothrix cholodnii SP-6 ornithine carbamoyltransferase YP_001790765.1 1850127 R 395495 CDS YP_001790766.1 171058417 6161234 complement(1850963..1851910) 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A1905 putrescine ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 1851910 6161234 Lcho_1734 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001790766.1 1850963 R 395495 CDS YP_001790767.1 171058418 6161235 complement(1851921..1853027) 1 NC_010524.1 KEGG: mpt:Mpe_A1904 ATP-binding component of putrescine transport system; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 1853027 6161235 Lcho_1735 Leptothrix cholodnii SP-6 spermidine/putrescine ABC transporter ATPase YP_001790767.1 1851921 R 395495 CDS YP_001790768.1 171058419 6161236 complement(1853062..1854189) 1 NC_010524.1 PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_1698 extracellular solute-binding protein, family 1; extracellular solute-binding protein 1854189 6161236 Lcho_1736 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001790768.1 1853062 R 395495 CDS YP_001790769.1 171058420 6161237 complement(1854357..1855853) 1 NC_010524.1 PFAM: Aldehyde Dehydrogenase_; KEGG: mpt:Mpe_A1909 putative aldehyde dehydrogenase; aldehyde dehydrogenase 1855853 6161237 Lcho_1737 Leptothrix cholodnii SP-6 aldehyde dehydrogenase YP_001790769.1 1854357 R 395495 CDS YP_001790770.1 171058421 6161238 complement(1855878..1857290) 1 NC_010524.1 PFAM: aminotransferase class-III; KEGG: mpt:Mpe_A1902 putative aminotransferase; putative aminotransferase 1857290 6161238 Lcho_1738 Leptothrix cholodnii SP-6 putative aminotransferase YP_001790770.1 1855878 R 395495 CDS YP_001790771.1 171058422 6163276 complement(1857325..1858689) 1 NC_010524.1 PFAM: glutamine synthetase catalytic region; KEGG: mpt:Mpe_A1901 glutamate--ammonia ligase; glutamate--putrescine ligase 1858689 6163276 Lcho_1739 Leptothrix cholodnii SP-6 glutamate--putrescine ligase YP_001790771.1 1857325 R 395495 CDS YP_001790772.1 171058423 6163277 complement(1858797..1859567) 1 NC_010524.1 PFAM: peptidase C26; KEGG: mpt:Mpe_A1900 glutamine amidotransferase-like protein; peptidase C26 1859567 6163277 Lcho_1740 Leptothrix cholodnii SP-6 peptidase C26 YP_001790772.1 1858797 R 395495 CDS YP_001790773.1 171058424 6163278 complement(1859793..1861118) 1 NC_010524.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: mpt:Mpe_A1899 oxidoreductase; FAD dependent oxidoreductase 1861118 6163278 Lcho_1741 Leptothrix cholodnii SP-6 FAD dependent oxidoreductase YP_001790773.1 1859793 R 395495 CDS YP_001790774.1 171058425 6163279 complement(1861180..1862505) 1 NC_010524.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 1862505 6163279 Lcho_1742 Leptothrix cholodnii SP-6 beta alanine--pyruvate transaminase YP_001790774.1 1861180 R 395495 CDS YP_001790775.1 171058426 6163280 complement(1862577..1863146) 1 NC_010524.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: rfr:Rfer_0363 hemerythrin HHE cation binding protein; hemerythrin HHE cation-binding domain-containing protein 1863146 6163280 Lcho_1743 Leptothrix cholodnii SP-6 hemerythrin HHE cation-binding domain-containing protein YP_001790775.1 1862577 R 395495 CDS YP_001790776.1 171058427 6163281 1863526..1864842 1 NC_010524.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: ajs:Ajs_2401 isocitrate lyase; isocitrate lyase 1864842 6163281 Lcho_1744 Leptothrix cholodnii SP-6 isocitrate lyase YP_001790776.1 1863526 D 395495 CDS YP_001790777.1 171058428 6161337 1865126..1867039 1 NC_010524.1 TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); TGS domain protein; Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; KEGG: dac:Daci_4616 threonyl-tRNA synthetase; threonyl-tRNA synthetase 1867039 6161337 Lcho_1745 Leptothrix cholodnii SP-6 threonyl-tRNA synthetase YP_001790777.1 1865126 D 395495 CDS YP_001790778.1 171058429 6161338 1867267..1867674 1 NC_010524.1 PFAM: initiation factor 3; KEGG: mpt:Mpe_A1887 putative translation initiation factor protein; initiation factor 3 1867674 6161338 Lcho_1746 Leptothrix cholodnii SP-6 initiation factor 3 YP_001790778.1 1867267 D 395495 CDS YP_001790779.1 171058430 6161339 1867799..1868002 1 NC_010524.1 PFAM: ribosomal protein L35; KEGG: aav:Aave_2857 ribosomal protein L35; 50S ribosomal protein L35 1868002 rpmI 6161339 rpmI Leptothrix cholodnii SP-6 50S ribosomal protein L35 YP_001790779.1 1867799 D 395495 CDS YP_001790780.1 171058431 6161340 1868030..1868386 1 NC_010524.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1868386 rplT 6161340 rplT Leptothrix cholodnii SP-6 50S ribosomal protein L20 YP_001790780.1 1868030 D 395495 CDS YP_001790781.1 171058432 6161341 1868520..1869563 1 NC_010524.1 TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; KEGG: ajs:Ajs_2396 phenylalanyl-tRNA synthetase, alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 1869563 6161341 Lcho_1749 Leptothrix cholodnii SP-6 phenylalanyl-tRNA synthetase subunit alpha YP_001790781.1 1868520 D 395495 CDS YP_001790782.1 171058433 6161342 1869598..1872048 1 NC_010524.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1872048 pheT 6161342 pheT Leptothrix cholodnii SP-6 phenylalanyl-tRNA synthetase subunit beta YP_001790782.1 1869598 D 395495 CDS YP_001790783.1 171058434 6161290 1872093..1872434 1 NC_010524.1 TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: mpt:Mpe_A1882 integration host factor alpha-subunit; integration host factor subunit alpha 1872434 6161290 Lcho_1751 Leptothrix cholodnii SP-6 integration host factor subunit alpha YP_001790783.1 1872093 D 395495 CDS YP_001790784.1 171058435 6161291 1872469..1872954 1 NC_010524.1 PFAM: regulatory protein MerR; KEGG: mpt:Mpe_A1881 putative transcriptional regulator; MerR family transcriptional regulator 1872954 6161291 Lcho_1752 Leptothrix cholodnii SP-6 MerR family transcriptional regulator YP_001790784.1 1872469 D 395495 CDS YP_001790785.1 171058436 6161294 complement(1873575..1876619) 1 NC_010524.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_1389 TPR repeat; hypothetical protein 1876619 6161294 Lcho_1753 Leptothrix cholodnii SP-6 hypothetical protein YP_001790785.1 1873575 R 395495 CDS YP_001790786.1 171058437 6160319 1876862..1882291 1 NC_010524.1 KEGG: mag:amb3790 large exoprotein involved in heme utilization or adhesion; large exoprotein involved in heme utilization or adhesion 1882291 6160319 Lcho_1754 Leptothrix cholodnii SP-6 large exoprotein involved in heme utilization or adhesion YP_001790786.1 1876862 D 395495 CDS YP_001790787.1 171058438 6160320 1882406..1884349 1 NC_010524.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_1841 TPR repeat-containing protein; hypothetical protein 1884349 6160320 Lcho_1755 Leptothrix cholodnii SP-6 hypothetical protein YP_001790787.1 1882406 D 395495 CDS YP_001790788.1 171058439 6160321 1884429..1885187 1 NC_010524.1 KEGG: bxe:Bxe_A3797 hypothetical protein; hypothetical protein 1885187 6160321 Lcho_1756 Leptothrix cholodnii SP-6 hypothetical protein YP_001790788.1 1884429 D 395495 CDS YP_001790789.1 171058440 6160322 1885272..1886084 1 NC_010524.1 KEGG: rpc:RPC_4192 hypothetical protein; hypothetical protein 1886084 6160322 Lcho_1757 Leptothrix cholodnii SP-6 hypothetical protein YP_001790789.1 1885272 D 395495 CDS YP_001790790.1 171058441 6160323 1886126..1888465 1 NC_010524.1 KEGG: bam:Bamb_3149 ABC transporter related; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; type I secretion system ATPase 1888465 6160323 Lcho_1758 Leptothrix cholodnii SP-6 type I secretion system ATPase YP_001790790.1 1886126 D 395495 CDS YP_001790791.1 171058442 6162056 1888467..1890023 1 NC_010524.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: bam:Bamb_3148 type I secretion membrane fusion protein, HlyD family; HlyD family type I secretion membrane fusion protein 1890023 6162056 Lcho_1759 Leptothrix cholodnii SP-6 HlyD family type I secretion membrane fusion protein YP_001790791.1 1888467 D 395495 CDS YP_001790792.1 171058443 6162057 complement(1890024..1891385) 1 NC_010524.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: bam:Bamb_3587 type I secretion membrane fusion protein, HlyD family; HlyD family type I secretion membrane fusion protein 1891385 6162057 Lcho_1760 Leptothrix cholodnii SP-6 HlyD family type I secretion membrane fusion protein YP_001790792.1 1890024 R 395495 CDS YP_001790793.1 171058444 6162058 complement(1891389..1893110) 1 NC_010524.1 KEGG: noc:Noc_1818 type I secretion system ATPase, PrtD; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; type I secretion system ATPase 1893110 6162058 Lcho_1761 Leptothrix cholodnii SP-6 type I secretion system ATPase YP_001790793.1 1891389 R 395495 CDS YP_001790794.1 171058445 6162059 1893455..1894900 1 NC_010524.1 KEGG: bam:Bamb_3147 outer membrane efflux protein; Outer membrane protein 1894900 6162059 Lcho_1762 Leptothrix cholodnii SP-6 Outer membrane protein YP_001790794.1 1893455 D 395495 CDS YP_001790795.1 171058446 6162060 complement(1894920..1895945) 1 NC_010524.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 1895945 6162060 Lcho_1763 Leptothrix cholodnii SP-6 fructose-1,6-bisphosphatase YP_001790795.1 1894920 R 395495 CDS YP_001790796.1 171058447 6162061 complement(1895970..1898663) 1 NC_010524.1 TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: mpt:Mpe_A2774 alanyl aminopeptidase; aminopeptidase N 1898663 pepN 6162061 pepN Leptothrix cholodnii SP-6 aminopeptidase N YP_001790796.1 1895970 R 395495 CDS YP_001790797.1 171058448 6163614 complement(1898656..1899366) 1 NC_010524.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rfr:Rfer_2702 HAD-superfamily hydrolase subfamily IA, variant 3; HAD family hydrolase 1899366 6163614 Lcho_1765 Leptothrix cholodnii SP-6 HAD family hydrolase YP_001790797.1 1898656 R 395495 CDS YP_001790798.1 171058449 6163615 complement(1899366..1900268) 1 NC_010524.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: mpt:Mpe_A2773 peptide chain release factor 2; peptide chain release factor 2 1900268 6163615 Lcho_1766 Leptothrix cholodnii SP-6 peptide chain release factor 2 YP_001790798.1 1899366 R 395495 CDS YP_001790799.1 171058450 6163616 complement(1900623..1901642) 1 NC_010524.1 PFAM: alpha/beta hydrolase fold; KEGG: mpt:Mpe_A2772 putative hydrolase protein; alpha/beta hydrolase fold protein 1901642 6163616 Lcho_1767 Leptothrix cholodnii SP-6 alpha/beta hydrolase fold protein YP_001790799.1 1900623 R 395495 CDS YP_001790800.1 171058451 6163617 complement(1901697..1903241) 1 NC_010524.1 PFAM: CheW domain protein; KEGG: neu:NE1397 CheW-like domain; CheW protein 1903241 6163617 Lcho_1768 Leptothrix cholodnii SP-6 CheW protein YP_001790800.1 1901697 R 395495 CDS YP_001790801.1 171058452 6163618 complement(1903261..1905339) 1 NC_010524.1 KEGG: pst:PSPTO_2441 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer 1905339 6163618 Lcho_1769 Leptothrix cholodnii SP-6 Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer YP_001790801.1 1903261 R 395495 CDS YP_001790802.1 171058453 6163619 complement(1905451..1906242) 1 NC_010524.1 KEGG: scl:sce1544 hypothetical protein; hypothetical protein 1906242 6163619 Lcho_1770 Leptothrix cholodnii SP-6 hypothetical protein YP_001790802.1 1905451 R 395495 CDS YP_001790803.1 171058454 6162925 1906316..1907059 1 NC_010524.1 PFAM: peptidase M50; KEGG: rso:RSc2524 hypothetical protein; peptidase M50 1907059 6162925 Lcho_1771 Leptothrix cholodnii SP-6 peptidase M50 YP_001790803.1 1906316 D 395495 CDS YP_001790804.1 171058455 6162926 complement(1907078..1907422) 1 NC_010524.1 KEGG: mpt:Mpe_A0031 hypothetical protein; hypothetical protein 1907422 6162926 Lcho_1772 Leptothrix cholodnii SP-6 hypothetical protein YP_001790804.1 1907078 R 395495 CDS YP_001790805.1 171058456 6162927 complement(1907433..1909514) 1 NC_010524.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: mpt:Mpe_A0261 hypothetical protein; peptidase S8/S53 subtilisin kexin sedolisin 1909514 6162927 Lcho_1773 Leptothrix cholodnii SP-6 peptidase S8/S53 subtilisin kexin sedolisin YP_001790805.1 1907433 R 395495 CDS YP_001790806.1 171058457 6162928 complement(1909672..1910835) 1 NC_010524.1 hypothetical protein 1910835 6162928 Lcho_1774 Leptothrix cholodnii SP-6 hypothetical protein YP_001790806.1 1909672 R 395495 CDS YP_001790807.1 171058458 6162929 1911153..1912145 1 NC_010524.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: rfr:Rfer_3900 hypothetical protein; helix-turn-helix type 11 domain-containing protein 1912145 6162929 Lcho_1775 Leptothrix cholodnii SP-6 helix-turn-helix type 11 domain-containing protein YP_001790807.1 1911153 D 395495 CDS YP_001790808.1 171058459 6162930 1912149..1916033 1 NC_010524.1 TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V RecC subunit; KEGG: dac:Daci_0520 exodeoxyribonuclease V, gamma subunit; exodeoxyribonuclease V subunit gamma 1916033 6162930 Lcho_1776 Leptothrix cholodnii SP-6 exodeoxyribonuclease V subunit gamma YP_001790808.1 1912149 D 395495 CDS YP_001790809.1 171058460 6162815 1916033..1919851 1 NC_010524.1 TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: dac:Daci_0521 exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V subunit beta 1919851 6162815 Lcho_1777 Leptothrix cholodnii SP-6 exodeoxyribonuclease V subunit beta YP_001790809.1 1916033 D 395495 CDS YP_001790810.1 171058461 6162816 1919848..1922067 1 NC_010524.1 TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: dac:Daci_0522 exodeoxyribonuclease V, alpha subunit; exodeoxyribonuclease V subunit alpha 1922067 6162816 Lcho_1778 Leptothrix cholodnii SP-6 exodeoxyribonuclease V subunit alpha YP_001790810.1 1919848 D 395495 CDS YP_001790811.1 171058462 6162817 complement(1922098..1923276) 1 NC_010524.1 PFAM: Extracellular ligand-binding receptor; KEGG: reh:H16_A1414 ABC-type transporter, periplasmic component; extracellular ligand-binding receptor 1923276 6162817 Lcho_1779 Leptothrix cholodnii SP-6 extracellular ligand-binding receptor YP_001790811.1 1922098 R 395495 CDS YP_001790812.1 171058463 6162818 complement(1923464..1925209) 1 NC_010524.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pna:Pnap_1503 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 1925209 6162818 Lcho_1780 Leptothrix cholodnii SP-6 TRAP dicarboxylate transporter subunit DctM YP_001790812.1 1923464 R 395495 CDS YP_001790813.1 171058464 6162819 complement(1925206..1925799) 1 NC_010524.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dac:Daci_2246 tripartite ATP-independent periplasmic transporter DctQ component; tripartite ATP-independent periplasmic transporter DctQ 1925799 6162819 Lcho_1781 Leptothrix cholodnii SP-6 tripartite ATP-independent periplasmic transporter DctQ YP_001790813.1 1925206 R 395495 CDS YP_001790814.1 171058465 6162820 complement(1925964..1926608) 1 NC_010524.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpt:Mpe_A1026 response regulator protein; two component LuxR family transcriptional regulator 1926608 6162820 Lcho_1782 Leptothrix cholodnii SP-6 two component LuxR family transcriptional regulator YP_001790814.1 1925964 R 395495 CDS YP_001790815.1 171058466 6161477 complement(1926586..1928091) 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; Cache type 2 domain protein; KEGG: mpt:Mpe_A1027 putative transmembrane sensor histidine kinase transcription regulator protein; histidine kinase 1928091 6161477 Lcho_1783 Leptothrix cholodnii SP-6 histidine kinase YP_001790815.1 1926586 R 395495 CDS YP_001790816.1 171058467 6161478 complement(1928107..1928457) 1 NC_010524.1 PFAM: protein of unknown function DUF442; KEGG: mpt:Mpe_A1235 hypothetical protein; hypothetical protein 1928457 6161478 Lcho_1784 Leptothrix cholodnii SP-6 hypothetical protein YP_001790816.1 1928107 R 395495 CDS YP_001790817.1 171058468 6161479 complement(1928503..1928949) 1 NC_010524.1 KEGG: mpt:Mpe_A1236 hypothetical protein; hypothetical protein 1928949 6161479 Lcho_1785 Leptothrix cholodnii SP-6 hypothetical protein YP_001790817.1 1928503 R 395495 CDS YP_001790818.1 171058469 6161480 complement(1929079..1929291) 1 NC_010524.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1929291 rpsU 6161480 rpsU Leptothrix cholodnii SP-6 30S ribosomal protein S21 YP_001790818.1 1929079 R 395495 CDS YP_001790819.1 171058470 6161481 complement(1929502..1930722) 1 NC_010524.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpt:Mpe_A1238 hypothetical protein; hypothetical protein 1930722 6161481 Lcho_1787 Leptothrix cholodnii SP-6 hypothetical protein YP_001790819.1 1929502 R 395495 CDS YP_001790820.1 171058471 6161482 complement(1930780..1931634) 1 NC_010524.1 KEGG: mpt:Mpe_A0481 periplasmic binding protein, putative; periplasmic-binding protein 1931634 6161482 Lcho_1788 Leptothrix cholodnii SP-6 periplasmic-binding protein YP_001790820.1 1930780 R 395495 CDS YP_001790821.1 171058472 6163288 complement(1931702..1932181) 1 NC_010524.1 KEGG: mpt:Mpe_A0480 cytochrome c550; cytochrome c550 1932181 6163288 Lcho_1789 Leptothrix cholodnii SP-6 cytochrome c550 YP_001790821.1 1931702 R 395495 CDS YP_001790822.1 171058473 6163289 1932491..1934752 1 NC_010524.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mpt:Mpe_A2583 sigma-54 activated regulatory protein; Fis family GAF modulated sigma54 specific transcriptional regulator 1934752 6163289 Lcho_1790 Leptothrix cholodnii SP-6 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001790822.1 1932491 D 395495 CDS YP_001790823.1 171058474 6163290 complement(1934719..1935864) 1 NC_010524.1 KEGG: pna:Pnap_0734 beta-lactamase domain protein; hypothetical protein 1935864 6163290 Lcho_1791 Leptothrix cholodnii SP-6 hypothetical protein YP_001790823.1 1934719 R 395495 CDS YP_001790824.1 171058475 6163291 1936140..1936982 1 NC_010524.1 KEGG: mpt:Mpe_A2585 pyrroloquinoline quinone biosynthesis protein PqqB; pyrroloquinoline quinone biosynthesis protein PqqB 1936982 6163291 Lcho_1792 Leptothrix cholodnii SP-6 pyrroloquinoline quinone biosynthesis protein PqqB YP_001790824.1 1936140 D 395495 CDS YP_001790825.1 171058476 6163292 1936979..1937698 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A2589 ABC efflux transporter, ATP-binding protein; ABC transporter-like protein 1937698 6163292 Lcho_1793 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001790825.1 1936979 D 395495 CDS YP_001790826.1 171058477 6163293 1937757..1938773 1 NC_010524.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: vei:Veis_4977 40-residue YVTN family beta-propeller repeat protein; hypothetical protein 1938773 6163293 Lcho_1794 Leptothrix cholodnii SP-6 hypothetical protein YP_001790826.1 1937757 D 395495 CDS YP_001790827.1 171058478 6160830 1938773..1939948 1 NC_010524.1 KEGG: pna:Pnap_0722 hypothetical protein; hypothetical protein 1939948 6160830 Lcho_1795 Leptothrix cholodnii SP-6 hypothetical protein YP_001790827.1 1938773 D 395495 CDS YP_001790828.1 171058479 6160831 1939945..1940787 1 NC_010524.1 PFAM: ABC-2 type transporter; KEGG: mpt:Mpe_A2590 efflux ABC transporter, permease protein; ABC-2 type transporter 1940787 6160831 Lcho_1796 Leptothrix cholodnii SP-6 ABC-2 type transporter YP_001790828.1 1939945 D 395495 CDS YP_001790829.1 171058480 6160832 1940759..1941517 1 NC_010524.1 KEGG: mpt:Mpe_A2591 hypothetical protein; hypothetical protein 1941517 6160832 Lcho_1797 Leptothrix cholodnii SP-6 hypothetical protein YP_001790829.1 1940759 D 395495 CDS YP_001790830.1 171058481 6160833 1941517..1942119 1 NC_010524.1 KEGG: mpt:Mpe_A2592 hypothetical protein; hypothetical protein 1942119 6160833 Lcho_1798 Leptothrix cholodnii SP-6 hypothetical protein YP_001790830.1 1941517 D 395495 CDS YP_001790831.1 171058482 6160834 1942161..1942661 1 NC_010524.1 KEGG: mpt:Mpe_A2593 hypothetical protein; hypothetical protein 1942661 6160834 Lcho_1799 Leptothrix cholodnii SP-6 hypothetical protein YP_001790831.1 1942161 D 395495 CDS YP_001790832.1 171058483 6160835 1942745..1943434 1 NC_010524.1 KEGG: mpt:Mpe_A2594 hypothetical protein; hypothetical protein 1943434 6160835 Lcho_1800 Leptothrix cholodnii SP-6 hypothetical protein YP_001790832.1 1942745 D 395495 CDS YP_001790833.1 171058484 6163440 1943425..1944420 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_B1040 probable extra-cytoplasmic solute receptor; hypothetical protein 1944420 6163440 Lcho_1801 Leptothrix cholodnii SP-6 hypothetical protein YP_001790833.1 1943425 D 395495 CDS YP_001790834.1 171058485 6163441 1944456..1945091 1 NC_010524.1 KEGG: pna:Pnap_3155 hypothetical protein; hypothetical protein 1945091 6163441 Lcho_1802 Leptothrix cholodnii SP-6 hypothetical protein YP_001790834.1 1944456 D 395495 CDS YP_001790835.1 171058486 6163442 complement(1945120..1946004) 1 NC_010524.1 KEGG: reh:H16_B1261 hypothetical protein; hypothetical protein 1946004 6163442 Lcho_1803 Leptothrix cholodnii SP-6 hypothetical protein YP_001790835.1 1945120 R 395495 CDS YP_001790836.1 171058487 6163443 1946133..1947338 1 NC_010524.1 PFAM: integrase family protein; KEGG: dac:Daci_3780 integrase family protein; integrase family protein 1947338 6163443 Lcho_1804 Leptothrix cholodnii SP-6 integrase family protein YP_001790836.1 1946133 D 395495 CDS YP_001790837.1 171058488 6163444 complement(1947393..1948061) 1 NC_010524.1 PFAM: SCP-like extracellular; KEGG: mpt:Mpe_A3565 hypothetical protein; hypothetical protein 1948061 6163444 Lcho_1805 Leptothrix cholodnii SP-6 hypothetical protein YP_001790837.1 1947393 R 395495 CDS YP_001790838.1 171058489 6163445 1948427..1949269 1 NC_010524.1 PFAM: protein of unknown function DUF519; KEGG: mpt:Mpe_A3717 hypothetical protein; hypothetical protein 1949269 6163445 Lcho_1806 Leptothrix cholodnii SP-6 hypothetical protein YP_001790838.1 1948427 D 395495 CDS YP_001790839.1 171058490 6162459 complement(1949798..1953442) 1 NC_010524.1 PFAM: WD-40 repeat protein; KEGG: amr:AM1_4989 WD-repeat protein; WD-40 repeat-containing protein 1953442 6162459 Lcho_1807 Leptothrix cholodnii SP-6 WD-40 repeat-containing protein YP_001790839.1 1949798 R 395495 CDS YP_001790840.1 171058491 6162460 complement(1953435..1954937) 1 NC_010524.1 SMART: TIR protein; KEGG: amr:AM1_4988 hypothetical protein; TIR protein 1954937 6162460 Lcho_1808 Leptothrix cholodnii SP-6 TIR protein YP_001790840.1 1953435 R 395495 CDS YP_001790841.1 171058492 6162461 complement(1955046..1955915) 1 NC_010524.1 PFAM: peptidase M48 Ste24p; KEGG: nmu:Nmul_A1887 peptidase M48, Ste24p; peptidase M48 Ste24p 1955915 6162461 Lcho_1809 Leptothrix cholodnii SP-6 peptidase M48 Ste24p YP_001790841.1 1955046 R 395495 CDS YP_001790842.1 171058493 6162462 1956097..1957194 1 NC_010524.1 hypothetical protein 1957194 6162462 Lcho_1810 Leptothrix cholodnii SP-6 hypothetical protein YP_001790842.1 1956097 D 395495 CDS YP_001790843.1 171058494 6162463 complement(1957286..1959034) 1 NC_010524.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: mpt:Mpe_A0473 quinoprotein ethanol dehydrogenase, putative; methanol/ethanol family PQQ-dependent dehydrogenase 1959034 6162463 Lcho_1811 Leptothrix cholodnii SP-6 methanol/ethanol family PQQ-dependent dehydrogenase YP_001790843.1 1957286 R 395495 CDS YP_001790844.1 171058495 6162464 complement(1959267..1960559) 1 NC_010524.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mpt:Mpe_A2523 molybdopterin biosynthesis protein; molybdenum cofactor synthesis domain-containing protein 1960559 6162464 Lcho_1812 Leptothrix cholodnii SP-6 molybdenum cofactor synthesis domain-containing protein YP_001790844.1 1959267 R 395495 CDS YP_001790845.1 171058496 6161375 1960734..1961450 1 NC_010524.1 KEGG: mpt:Mpe_A2223 putative permease component of ABC transporter; ABC transporter permease 1961450 6161375 Lcho_1813 Leptothrix cholodnii SP-6 ABC transporter permease YP_001790845.1 1960734 D 395495 CDS YP_001790846.1 171058497 6161376 1961447..1962166 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A2222 putative ATP-binding component of ABC transporter; ABC transporter-like protein 1962166 6161376 Lcho_1814 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001790846.1 1961447 D 395495 CDS YP_001790847.1 171058498 6161377 1962157..1963005 1 NC_010524.1 KEGG: mpt:Mpe_A2221 hypothetical protein; hypothetical protein 1963005 6161377 Lcho_1815 Leptothrix cholodnii SP-6 hypothetical protein YP_001790847.1 1962157 D 395495 CDS YP_001790848.1 171058499 6161378 1963237..1963710 1 NC_010524.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pna:Pnap_0048 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1963710 6161378 Lcho_1816 Leptothrix cholodnii SP-6 4Fe-4S ferredoxin YP_001790848.1 1963237 D 395495 CDS YP_001790849.1 171058500 6161379 1963721..1965568 1 NC_010524.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: mpt:Mpe_A2581 tungsten-containing aldehyde:ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase 1965568 6161379 Lcho_1817 Leptothrix cholodnii SP-6 aldehyde ferredoxin oxidoreductase YP_001790849.1 1963721 D 395495 CDS YP_001790850.1 171058501 6161380 1965646..1966926 1 NC_010524.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pna:Pnap_0050 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1966926 6161380 Lcho_1818 Leptothrix cholodnii SP-6 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001790850.1 1965646 D 395495 CDS YP_001790851.1 171058502 6163853 1966979..1967233 1 NC_010524.1 PFAM: thiamineS protein; KEGG: mpt:Mpe_A2579 hypothetical protein; sulfur transfer protein ThisS 1967233 6163853 Lcho_1819 Leptothrix cholodnii SP-6 sulfur transfer protein ThisS YP_001790851.1 1966979 D 395495 CDS YP_001790852.1 171058503 6163854 1967234..1967536 1 NC_010524.1 KEGG: mpt:Mpe_A2578 hypothetical protein; hypothetical protein 1967536 6163854 Lcho_1820 Leptothrix cholodnii SP-6 hypothetical protein YP_001790852.1 1967234 D 395495 CDS YP_001790853.1 171058504 6163855 complement(1967563..1967856) 1 NC_010524.1 PFAM: GYD family protein; KEGG: reh:H16_B1698 hypothetical protein; GYD family protein 1967856 6163855 Lcho_1821 Leptothrix cholodnii SP-6 GYD family protein YP_001790853.1 1967563 R 395495 CDS YP_001790854.1 171058505 6163856 1968060..1969220 1 NC_010524.1 PFAM: regulatory protein LysR; KEGG: bbr:BB2126 hypothetical protein; molybdate metabolism transcriptional regulator 1969220 6163856 Lcho_1822 Leptothrix cholodnii SP-6 molybdate metabolism transcriptional regulator YP_001790854.1 1968060 D 395495 CDS YP_001790855.1 171058506 6163857 1969408..1972617 1 NC_010524.1 KEGG: mpt:Mpe_A2664 signal transduction protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1972617 6163857 Lcho_1823 Leptothrix cholodnii SP-6 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001790855.1 1969408 D 395495 CDS YP_001790856.1 171058507 6163858 complement(1972646..1973674) 1 NC_010524.1 PFAM: beta-lactamase domain protein; KEGG: mpt:Mpe_A0472 hydrolase, putative; beta-lactamase domain-containing protein 1973674 6163858 Lcho_1824 Leptothrix cholodnii SP-6 beta-lactamase domain-containing protein YP_001790856.1 1972646 R 395495 CDS YP_001790857.1 171058508 6163932 complement(1973671..1974516) 1 NC_010524.1 KEGG: mpt:Mpe_A0471 hypothetical protein; hypothetical protein 1974516 6163932 Lcho_1825 Leptothrix cholodnii SP-6 hypothetical protein YP_001790857.1 1973671 R 395495 CDS YP_001790858.1 171058509 6163933 complement(1974550..1976721) 1 NC_010524.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mpt:Mpe_A1076 iron transporter; TonB-dependent receptor 1976721 6163933 Lcho_1826 Leptothrix cholodnii SP-6 TonB-dependent receptor YP_001790858.1 1974550 R 395495 CDS YP_001790859.1 171058510 6163934 complement(1976959..1977798) 1 NC_010524.1 KEGG: rfr:Rfer_1303 hypothetical protein; hypothetical protein 1977798 6163934 Lcho_1827 Leptothrix cholodnii SP-6 hypothetical protein YP_001790859.1 1976959 R 395495 CDS YP_001790860.1 171058511 6163935 complement(1977795..1978256) 1 NC_010524.1 PFAM: regulatory protein MarR; KEGG: dac:Daci_3704 transcriptional regulator, MarR family; MarR family transcriptional regulator 1978256 6163935 Lcho_1828 Leptothrix cholodnii SP-6 MarR family transcriptional regulator YP_001790860.1 1977795 R 395495 CDS YP_001790861.1 171058512 6163936 complement(1978282..1978707) 1 NC_010524.1 PFAM: BLUF domain protein; KEGG: mpt:Mpe_A1075 hypothetical protein; BLUF domain-containing protein 1978707 6163936 Lcho_1829 Leptothrix cholodnii SP-6 BLUF domain-containing protein YP_001790861.1 1978282 R 395495 CDS YP_001790862.1 171058513 6163937 complement(1978722..1979474) 1 NC_010524.1 PFAM: GTP cyclohydrolase I; KEGG: mpt:Mpe_A1074 GTP cyclohydrolase I; GTP cyclohydrolase I 1979474 6163937 Lcho_1830 Leptothrix cholodnii SP-6 GTP cyclohydrolase I YP_001790862.1 1978722 R 395495 CDS YP_001790863.1 171058514 6161319 1979968..1980891 1 NC_010524.1 KEGG: amr:AM1_A0167 hypothetical protein; hypothetical protein 1980891 6161319 Lcho_1831 Leptothrix cholodnii SP-6 hypothetical protein YP_001790863.1 1979968 D 395495 CDS YP_001790864.1 171058515 6161320 1981014..1982738 1 NC_010524.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ajs:Ajs_3752 major facilitator superfamily MFS_1; general substrate transporter 1982738 6161320 Lcho_1832 Leptothrix cholodnii SP-6 general substrate transporter YP_001790864.1 1981014 D 395495 CDS YP_001790865.1 171058516 6161321 1982912..1984177 1 NC_010524.1 KEGG: mgm:Mmc1_0996 chromosome segregation ATPases-like protein; hypothetical protein 1984177 6161321 Lcho_1833 Leptothrix cholodnii SP-6 hypothetical protein YP_001790865.1 1982912 D 395495 CDS YP_001790866.1 171058517 6161322 complement(1984208..1984417) 1 NC_010524.1 PFAM: Heavy metal transport/detoxification protein; KEGG: mpt:Mpe_A1641 chaperonin; heavy metal transport/detoxification protein 1984417 6161322 Lcho_1834 Leptothrix cholodnii SP-6 heavy metal transport/detoxification protein YP_001790866.1 1984208 R 395495 CDS YP_001790867.1 171058518 6161323 1984590..1987004 1 NC_010524.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mpt:Mpe_A1640 P1 ATPase/HMA domain; heavy metal translocating P-type ATPase 1987004 6161323 Lcho_1835 Leptothrix cholodnii SP-6 heavy metal translocating P-type ATPase YP_001790867.1 1984590 D 395495 CDS YP_001790868.1 171058519 6161324 complement(1987009..1987497) 1 NC_010524.1 PFAM: thioesterase superfamily protein; KEGG: dar:Daro_0435 hypothetical protein; hypothetical protein 1987497 6161324 Lcho_1836 Leptothrix cholodnii SP-6 hypothetical protein YP_001790868.1 1987009 R 395495 CDS YP_001790869.1 171058520 6160605 1987536..1988312 1 NC_010524.1 PFAM: protein of unknown function DUF1624; KEGG: mpt:Mpe_A1762 conserved hypothetical protein MTH789; hypothetical protein 1988312 6160605 Lcho_1837 Leptothrix cholodnii SP-6 hypothetical protein YP_001790869.1 1987536 D 395495 CDS YP_001790870.1 171058521 6160606 complement(1988376..1989203) 1 NC_010524.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mpt:Mpe_A1764 putative exported isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1989203 6160606 Lcho_1838 Leptothrix cholodnii SP-6 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001790870.1 1988376 R 395495 CDS YP_001790871.1 171058522 6160607 complement(1989335..1989640) 1 NC_010524.1 PFAM: BolA family protein; KEGG: bur:Bcep18194_A5212 BolA-like protein; BolA family protein 1989640 6160607 Lcho_1839 Leptothrix cholodnii SP-6 BolA family protein YP_001790871.1 1989335 R 395495 CDS YP_001790872.1 171058523 6160608 complement(1989637..1990275) 1 NC_010524.1 TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; KEGG: mpt:Mpe_A1766 intracellular septation protein A; intracellular septation protein A 1990275 6160608 Lcho_1840 Leptothrix cholodnii SP-6 intracellular septation protein A YP_001790872.1 1989637 R 395495 CDS YP_001790873.1 171058524 6160609 complement(1990376..1990801) 1 NC_010524.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: mpt:Mpe_A1767 methionine-S-oxide reductase; methionine-R-sulfoxide reductase 1990801 6160609 Lcho_1841 Leptothrix cholodnii SP-6 methionine-R-sulfoxide reductase YP_001790873.1 1990376 R 395495 CDS YP_001790874.1 171058525 6160610 complement(1990798..1992309) 1 NC_010524.1 PFAM: protein of unknown function UPF0061; KEGG: mpt:Mpe_A1768 hypothetical protein; hypothetical protein 1992309 6160610 Lcho_1842 Leptothrix cholodnii SP-6 hypothetical protein YP_001790874.1 1990798 R 395495 CDS YP_001790875.1 171058526 6161797 1992437..1994107 1 NC_010524.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1994107 6161797 Lcho_1843 Leptothrix cholodnii SP-6 long-chain-fatty-acid--CoA ligase YP_001790875.1 1992437 D 395495 CDS YP_001790876.1 171058527 6161798 1994861..1995397 1 NC_010524.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: kpn:KPN_00261 hypothetical protein; HNH endonuclease 1995397 6161798 Lcho_1844 Leptothrix cholodnii SP-6 HNH endonuclease YP_001790876.1 1994861 D 395495 CDS YP_001790877.1 171058528 6161799 1996050..1996694 1 NC_010524.1 hypothetical protein 1996694 6161799 Lcho_1845 Leptothrix cholodnii SP-6 hypothetical protein YP_001790877.1 1996050 D 395495 CDS YP_001790878.1 171058529 6161800 1996897..1997424 1 NC_010524.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dar:Daro_3437 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1997424 6161800 Lcho_1846 Leptothrix cholodnii SP-6 N-acetyltransferase GCN5 YP_001790878.1 1996897 D 395495 CDS YP_001790879.1 171058530 6161801 1997711..1998319 1 NC_010524.1 PFAM: protein of unknown function UPF0126; KEGG: sru:SRU_2560 UPF0126 domain protein; hypothetical protein 1998319 6161801 Lcho_1847 Leptothrix cholodnii SP-6 hypothetical protein YP_001790879.1 1997711 D 395495 CDS YP_001790880.1 171058531 6161802 complement(1998368..1999597) 1 NC_010524.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rfr:Rfer_0850 lytic murein transglycosylase; lytic murein transglycosylase 1999597 6161802 Lcho_1848 Leptothrix cholodnii SP-6 lytic murein transglycosylase YP_001790880.1 1998368 R 395495 CDS YP_001790881.1 171058532 6163371 1999650..2001086 1 NC_010524.1 PFAM: peptidase U32; KEGG: pna:Pnap_3025 peptidase U32; peptidase U32 2001086 6163371 Lcho_1849 Leptothrix cholodnii SP-6 peptidase U32 YP_001790881.1 1999650 D 395495 CDS YP_001790882.1 171058533 6163372 2001092..2002123 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: mpt:Mpe_A1771 putative amino acid transmembrane transmembrane protein; inner-membrane translocator 2002123 6163372 Lcho_1850 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001790882.1 2001092 D 395495 CDS YP_001790883.1 171058534 6163373 2002116..2003414 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: pol:Bpro_2576 inner-membrane translocator; inner-membrane translocator 2003414 6163373 Lcho_1851 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001790883.1 2002116 D 395495 CDS YP_001790884.1 171058535 6163374 2003411..2004172 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A1773 putative amino-acid ATP-binding ABC transporter protein; ABC transporter-like protein 2004172 6163374 Lcho_1852 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001790884.1 2003411 D 395495 CDS YP_001790885.1 171058536 6163375 2004165..2004872 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A1774 putative amino-acid ATP-binding ABC transporter protein; ABC transporter-like protein 2004872 6163375 Lcho_1853 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001790885.1 2004165 D 395495 CDS YP_001790886.1 171058537 6163376 2005049..2006032 1 NC_010524.1 PFAM: transglutaminase domain protein; KEGG: dar:Daro_0510 transglutaminase-like; transglutaminase domain-containing protein 2006032 6163376 Lcho_1854 Leptothrix cholodnii SP-6 transglutaminase domain-containing protein YP_001790886.1 2005049 D 395495 CDS YP_001790887.1 171058538 6163332 2006082..2006546 1 NC_010524.1 PFAM: thioesterase superfamily protein; KEGG: mpt:Mpe_A1780 hypothetical protein; thioesterase superfamily protein 2006546 6163332 Lcho_1855 Leptothrix cholodnii SP-6 thioesterase superfamily protein YP_001790887.1 2006082 D 395495 CDS YP_001790888.1 171058539 6163333 2006578..2007045 1 NC_010524.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aav:Aave_2870 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2007045 6163333 Lcho_1856 Leptothrix cholodnii SP-6 N-acetyltransferase GCN5 YP_001790888.1 2006578 D 395495 CDS YP_001790889.1 171058540 6163334 complement(2007067..2008539) 1 NC_010524.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_B1745 putative diguanylate cyclase (GGDEF domain); diguanylate cyclase 2008539 6163334 Lcho_1857 Leptothrix cholodnii SP-6 diguanylate cyclase YP_001790889.1 2007067 R 395495 CDS YP_001790890.1 171058541 6163335 complement(2008665..2009888) 1 NC_010524.1 KEGG: dac:Daci_2891 hypothetical protein; hypothetical protein 2009888 6163335 Lcho_1858 Leptothrix cholodnii SP-6 hypothetical protein YP_001790890.1 2008665 R 395495 CDS YP_001790891.1 171058542 6163336 complement(2009930..2011126) 1 NC_010524.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: dac:Daci_2892 cytochrome-c peroxidase; di-heme cytochrome c peroxidase 2011126 6163336 Lcho_1859 Leptothrix cholodnii SP-6 di-heme cytochrome c peroxidase YP_001790891.1 2009930 R 395495 CDS YP_001790892.1 171058543 6163337 complement(2011141..2012781) 1 NC_010524.1 KEGG: dac:Daci_2893 hypothetical protein; hypothetical protein 2012781 6163337 Lcho_1860 Leptothrix cholodnii SP-6 hypothetical protein YP_001790892.1 2011141 R 395495 CDS YP_001790893.1 171058544 6162391 complement(2012902..2013315) 1 NC_010524.1 KEGG: ade:Adeh_3688 response regulator receiver domain protein (CheY-like); response regulator receiver domain-containing protein 2013315 6162391 Lcho_1861 Leptothrix cholodnii SP-6 response regulator receiver domain-containing protein YP_001790893.1 2012902 R 395495 CDS YP_001790894.1 171058545 6162392 2013472..2015955 1 NC_010524.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: mpt:Mpe_A1792 putative transcription accessory protein; RNA-binding S1 domain-containing protein 2015955 6162392 Lcho_1862 Leptothrix cholodnii SP-6 RNA-binding S1 domain-containing protein YP_001790894.1 2013472 D 395495 CDS YP_001790895.1 171058546 6162393 complement(2015966..2016592) 1 NC_010524.1 KEGG: pna:Pnap_3051 hypothetical protein; hypothetical protein 2016592 6162393 Lcho_1863 Leptothrix cholodnii SP-6 hypothetical protein YP_001790895.1 2015966 R 395495 CDS YP_001790896.1 171058547 6162394 complement(2016874..2017572) 1 NC_010524.1 KEGG: mpt:Mpe_A2501 PAP2 superfamily protein; PAP2 superfamily protein 2017572 6162394 Lcho_1864 Leptothrix cholodnii SP-6 PAP2 superfamily protein YP_001790896.1 2016874 R 395495 CDS YP_001790897.1 171058548 6162395 complement(2017569..2019296) 1 NC_010524.1 PFAM: sulfatase; protein of unknown function DUF1705; KEGG: har:HEAR0049 putative sulfatase membrane protein; sulfatase 2019296 6162395 Lcho_1865 Leptothrix cholodnii SP-6 sulfatase YP_001790897.1 2017569 R 395495 CDS YP_001790898.1 171058549 6162396 2019392..2020051 1 NC_010524.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xau:Xaut_3399 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2020051 6162396 Lcho_1866 Leptothrix cholodnii SP-6 two component transcriptional regulator YP_001790898.1 2019392 D 395495 CDS YP_001790899.1 171058550 6162202 2020087..2021373 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A3149 sensor histidine kinase; histidine kinase 2021373 6162202 Lcho_1867 Leptothrix cholodnii SP-6 histidine kinase YP_001790899.1 2020087 D 395495 CDS YP_001790900.1 171058551 6162203 2021512..2022396 1 NC_010524.1 KEGG: art:Arth_1252 hypothetical protein; hypothetical protein 2022396 6162203 Lcho_1868 Leptothrix cholodnii SP-6 hypothetical protein YP_001790900.1 2021512 D 395495 CDS YP_001790901.1 171058552 6162204 2022393..2022890 1 NC_010524.1 KEGG: art:Arth_1251 hypothetical protein; hypothetical protein 2022890 6162204 Lcho_1869 Leptothrix cholodnii SP-6 hypothetical protein YP_001790901.1 2022393 D 395495 CDS YP_001790902.1 171058553 6162205 2022892..2023272 1 NC_010524.1 hypothetical protein 2023272 6162205 Lcho_1870 Leptothrix cholodnii SP-6 hypothetical protein YP_001790902.1 2022892 D 395495 CDS YP_001790903.1 171058554 6162206 2023277..2024776 1 NC_010524.1 PFAM: Patatin; KEGG: art:Arth_1250 patatin; patatin 2024776 6162206 Lcho_1871 Leptothrix cholodnii SP-6 patatin YP_001790903.1 2023277 D 395495 CDS YP_001790904.1 171058555 6162207 2024827..2025792 1 NC_010524.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mpt:Mpe_A1799 putative esterase/lipase; alpha/beta hydrolase domain-containing protein 2025792 6162207 Lcho_1872 Leptothrix cholodnii SP-6 alpha/beta hydrolase domain-containing protein YP_001790904.1 2024827 D 395495 CDS YP_001790905.1 171058556 6160373 2025789..2026649 1 NC_010524.1 PFAM: GCN5-related N-acetyltransferase; thioesterase superfamily protein; KEGG: mpt:Mpe_A1800 thioesterase-like protein; thioesterase superfamily protein 2026649 6160373 Lcho_1873 Leptothrix cholodnii SP-6 thioesterase superfamily protein YP_001790905.1 2025789 D 395495 CDS YP_001790906.1 171058557 6160374 complement(2026661..2027620) 1 NC_010524.1 PFAM: protein of unknown function DUF833; KEGG: mpt:Mpe_A1864 hypothetical protein; hypothetical protein 2027620 6160374 Lcho_1874 Leptothrix cholodnii SP-6 hypothetical protein YP_001790906.1 2026661 R 395495 CDS YP_001790907.1 171058558 6160375 complement(2027625..2027975) 1 NC_010524.1 hypothetical protein 2027975 6160375 Lcho_1875 Leptothrix cholodnii SP-6 hypothetical protein YP_001790907.1 2027625 R 395495 CDS YP_001790908.1 171058559 6160376 complement(2027972..2028931) 1 NC_010524.1 TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: mpt:Mpe_A1862 hypothetical protein; folate-binding protein YgfZ 2028931 6160376 Lcho_1876 Leptothrix cholodnii SP-6 folate-binding protein YgfZ YP_001790908.1 2027972 R 395495 CDS YP_001790909.1 171058560 6160377 2029109..2030095 1 NC_010524.1 PFAM: aminodeoxychorismate lyase; KEGG: mpt:Mpe_A1861 hypothetical protein; aminodeoxychorismate lyase 2030095 6160377 Lcho_1877 Leptothrix cholodnii SP-6 aminodeoxychorismate lyase YP_001790909.1 2029109 D 395495 CDS YP_001790910.1 171058561 6160378 2030139..2030819 1 NC_010524.1 PFAM: thymidylate kinase; KEGG: mpt:Mpe_A1860 thymidylate kinase; dTMP kinase 2030819 6160378 Lcho_1878 Leptothrix cholodnii SP-6 dTMP kinase YP_001790910.1 2030139 D 395495 CDS YP_001790911.1 171058562 6160289 2030813..2031895 1 NC_010524.1 TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: mpt:Mpe_A1859 DNA-directed DNA polymerase; DNA polymerase III subunit delta' 2031895 6160289 Lcho_1879 Leptothrix cholodnii SP-6 DNA polymerase III subunit delta' YP_001790911.1 2030813 D 395495 CDS YP_001790912.1 171058563 6160290 2031892..2032272 1 NC_010524.1 PFAM: type IV pilus assembly PilZ; KEGG: mpt:Mpe_A1858 type IV pilus assembly protein; type IV pilus assembly PilZ 2032272 6160290 Lcho_1880 Leptothrix cholodnii SP-6 type IV pilus assembly PilZ YP_001790912.1 2031892 D 395495 CDS YP_001790913.1 171058564 6160291 2032379..2033155 1 NC_010524.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: mpt:Mpe_A1857 putative deoxyribonuclease; TatD family hydrolase 2033155 6160291 Lcho_1881 Leptothrix cholodnii SP-6 TatD family hydrolase YP_001790913.1 2032379 D 395495 CDS YP_001790914.1 171058565 6160292 2033296..2033526 1 NC_010524.1 KEGG: rfr:Rfer_3578 hypothetical protein; hypothetical protein 2033526 6160292 Lcho_1882 Leptothrix cholodnii SP-6 hypothetical protein YP_001790914.1 2033296 D 395495 CDS YP_001790915.1 171058566 6160293 2033543..2034079 1 NC_010524.1 KEGG: mpt:Mpe_A1813 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 2034079 6160293 Lcho_1883 Leptothrix cholodnii SP-6 peptide deformylase YP_001790915.1 2033543 D 395495 CDS YP_001790916.1 171058567 6160294 complement(2034084..2035001) 1 NC_010524.1 PFAM: band 7 protein; KEGG: mpt:Mpe_A1927 putative membrane protein with protease subunit; hypothetical protein 2035001 6160294 Lcho_1884 Leptothrix cholodnii SP-6 hypothetical protein YP_001790916.1 2034084 R 395495 CDS YP_001790917.1 171058568 6159912 complement(2035048..2035479) 1 NC_010524.1 PFAM: protein of unknown function DUF107; KEGG: mpt:Mpe_A1926 hypothetical protein; hypothetical protein 2035479 6159912 Lcho_1885 Leptothrix cholodnii SP-6 hypothetical protein YP_001790917.1 2035048 R 395495 CDS YP_001790918.1 171058569 6159913 2035612..2037867 1 NC_010524.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: mpt:Mpe_A1925 lysine decarboxylase; lysine decarboxylase 2037867 6159913 Lcho_1886 Leptothrix cholodnii SP-6 lysine decarboxylase YP_001790918.1 2035612 D 395495 CDS YP_001790919.1 171058570 6159914 2038039..2040315 1 NC_010524.1 KEGG: pna:Pnap_1103 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX 2040315 6159914 Lcho_1887 Leptothrix cholodnii SP-6 glycogen debranching protein GlgX YP_001790919.1 2038039 D 395495 CDS YP_001790920.1 171058571 6159915 2040417..2042051 1 NC_010524.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 2042051 6159915 Lcho_1888 Leptothrix cholodnii SP-6 phosphoglucomutase YP_001790920.1 2040417 D 395495 CDS YP_001790921.1 171058572 6159916 2042098..2043366 1 NC_010524.1 TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pna:Pnap_1106 glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase 2043366 6159916 Lcho_1889 Leptothrix cholodnii SP-6 glucose-1-phosphate adenylyltransferase YP_001790921.1 2042098 D 395495 CDS YP_001790922.1 171058573 6159917 2043435..2044898 1 NC_010524.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 2044898 glgA 6159917 glgA Leptothrix cholodnii SP-6 glycogen synthase YP_001790922.1 2043435 D 395495 CDS YP_001790923.1 171058574 6160033 2044959..2047487 1 NC_010524.1 KEGG: bxe:Bxe_B2201 phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 2047487 6160033 Lcho_1891 Leptothrix cholodnii SP-6 glycogen/starch/alpha-glucan phosphorylase YP_001790923.1 2044959 D 395495 CDS YP_001790924.1 171058575 6160034 complement(2047534..2049000) 1 NC_010524.1 KEGG: mpt:Mpe_A3512 uncharacterized protein containing a von Willebrand factor type A (vWA) domain; von Willebrand factor type A (vWA) domain-containing protein 2049000 6160034 Lcho_1892 Leptothrix cholodnii SP-6 von Willebrand factor type A (vWA) domain-containing protein YP_001790924.1 2047534 R 395495 CDS YP_001790925.1 171058576 6160035 complement(2049015..2050409) 1 NC_010524.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mpt:Mpe_A3511 MoxR-like ATPase; ATPase 2050409 6160035 Lcho_1893 Leptothrix cholodnii SP-6 ATPase YP_001790925.1 2049015 R 395495 CDS YP_001790926.1 171058577 6160036 complement(2050472..2051887) 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A1573 putative oxidative stress resistance two-component transmembrane sensor histidine kinase transcription regulator protein; histidine kinase 2051887 6160036 Lcho_1894 Leptothrix cholodnii SP-6 histidine kinase YP_001790926.1 2050472 R 395495 CDS YP_001790927.1 171058578 6160037 complement(2051907..2052641) 1 NC_010524.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 2052641 ompR 6160037 ompR Leptothrix cholodnii SP-6 osmolarity response regulator YP_001790927.1 2051907 R 395495 CDS YP_001790928.1 171058579 6160038 2052896..2053570 1 NC_010524.1 PFAM: protein of unknown function DUF541; KEGG: mpt:Mpe_A1575 hypothetical protein; hypothetical protein 2053570 6160038 Lcho_1896 Leptothrix cholodnii SP-6 hypothetical protein YP_001790928.1 2052896 D 395495 CDS YP_001790929.1 171058580 6159831 complement(2053592..2054362) 1 NC_010524.1 TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rfr:Rfer_2069 3-hydroxybutyrate dehydrogenase; 3-hydroxybutyrate dehydrogenase 2054362 6159831 Lcho_1897 Leptothrix cholodnii SP-6 3-hydroxybutyrate dehydrogenase YP_001790929.1 2053592 R 395495 CDS YP_001790930.1 171058581 6159832 2054436..2055338 1 NC_010524.1 PFAM: alpha/beta hydrolase fold; KEGG: mpt:Mpe_A1577 putative hydrolase protein; alpha/beta hydrolase fold protein 2055338 6159832 Lcho_1898 Leptothrix cholodnii SP-6 alpha/beta hydrolase fold protein YP_001790930.1 2054436 D 395495 CDS YP_001790931.1 171058582 6159833 2055348..2057624 1 NC_010524.1 KEGG: mpt:Mpe_A1578 GTP diphosphokinase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein; (p)ppGpp synthetase I SpoT/RelA 2057624 6159833 Lcho_1899 Leptothrix cholodnii SP-6 (p)ppGpp synthetase I SpoT/RelA YP_001790931.1 2055348 D 395495 CDS YP_001790932.1 171058583 6159835 2057905..2058492 1 NC_010524.1 TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: reu:Reut_A1350 polyhydroxyalkanoate synthesis repressor PhaR; polyhydroxyalkonate synthesis repressor PhaR 2058492 6159835 Lcho_1900 Leptothrix cholodnii SP-6 polyhydroxyalkonate synthesis repressor PhaR YP_001790932.1 2057905 D 395495 CDS YP_001790933.1 171058584 6159801 complement(2058549..2059193) 1 NC_010524.1 PFAM: lipolytic protein G-D-S-L family; KEGG: ajs:Ajs_2271 lipolytic enzyme, G-D-S-L family; GDSL family lipase 2059193 6159801 Lcho_1901 Leptothrix cholodnii SP-6 GDSL family lipase YP_001790933.1 2058549 R 395495 CDS YP_001790934.1 171058585 6159802 2059237..2059938 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A1816 ABC transporter, ATP-binding protein; ABC transporter-like protein 2059938 6159802 Lcho_1902 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001790934.1 2059237 D 395495 CDS YP_001790935.1 171058586 6159803 2059959..2060693 1 NC_010524.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: ajs:Ajs_2268 RNA methyltransferase, TrmH family, group 3; RNA methyltransferase 2060693 6159803 Lcho_1903 Leptothrix cholodnii SP-6 RNA methyltransferase YP_001790935.1 2059959 D 395495 CDS YP_001790936.1 171058587 6159804 2060690..2061466 1 NC_010524.1 PFAM: Silent information regulator protein Sir2; KEGG: ajs:Ajs_2262 silent information regulator protein Sir2; silent information regulator protein Sir2 2061466 6159804 Lcho_1904 Leptothrix cholodnii SP-6 silent information regulator protein Sir2 YP_001790936.1 2060690 D 395495 CDS YP_001790937.1 171058588 6159805 2061528..2062154 1 NC_010524.1 TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: mpt:Mpe_A1818 uracil phosphoribosyltransferase; uracil phosphoribosyltransferase 2062154 6159805 Lcho_1905 Leptothrix cholodnii SP-6 uracil phosphoribosyltransferase YP_001790937.1 2061528 D 395495 CDS YP_001790938.1 171058589 6159806 2062185..2062559 1 NC_010524.1 KEGG: rfr:Rfer_2233 hypothetical protein; hypothetical protein 2062559 6159806 Lcho_1906 Leptothrix cholodnii SP-6 hypothetical protein YP_001790938.1 2062185 D 395495 CDS YP_001790939.1 171058590 6160147 complement(2062581..2063615) 1 NC_010524.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mpt:Mpe_A1820 putative D-3-phosphoglycerate dehydrogenase oxidoreductase protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 2063615 6160147 Lcho_1907 Leptothrix cholodnii SP-6 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_001790939.1 2062581 R 395495 CDS YP_001790940.1 171058591 6160148 2063672..2066128 1 NC_010524.1 PFAM: peptidase S45 penicillin amidase; KEGG: mpt:Mpe_A1822 penicillin amidase; peptidase S45 penicillin amidase 2066128 6160148 Lcho_1908 Leptothrix cholodnii SP-6 peptidase S45 penicillin amidase YP_001790940.1 2063672 D 395495 CDS YP_001790941.1 171058592 6160149 2066357..2067226 1 NC_010524.1 KEGG: pau:PA14_58700 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 2067226 6160149 Lcho_1909 Leptothrix cholodnii SP-6 nicotinate-nucleotide pyrophosphorylase YP_001790941.1 2066357 D 395495 CDS YP_001790942.1 171058593 6160150 2067346..2067777 1 NC_010524.1 PFAM: type IV pilus assembly PilZ; KEGG: mpt:Mpe_B0017 hypothetical protein; type IV pilus assembly PilZ 2067777 6160150 Lcho_1910 Leptothrix cholodnii SP-6 type IV pilus assembly PilZ YP_001790942.1 2067346 D 395495 CDS YP_001790943.1 171058594 6160152 2068080..2068715 1 NC_010524.1 KEGG: mpt:Mpe_A2850 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: putative methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 2068715 6160152 Lcho_1911 Leptothrix cholodnii SP-6 tRNA (guanine-N(7)-)-methyltransferase YP_001790943.1 2068080 D 395495 CDS YP_001790944.1 171058595 6160307 complement(2068723..2069535) 1 NC_010524.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 2069535 6160307 Lcho_1912 Leptothrix cholodnii SP-6 undecaprenyl pyrophosphate phosphatase YP_001790944.1 2068723 R 395495 CDS YP_001790945.1 171058596 6160308 2069677..2070927 1 NC_010524.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mpt:Mpe_A2033 putative arginine/proline rich protein; RNA-binding S4 domain-containing protein 2070927 6160308 Lcho_1913 Leptothrix cholodnii SP-6 RNA-binding S4 domain-containing protein YP_001790945.1 2069677 D 395495 CDS YP_001790946.1 171058597 6160309 2071017..2071655 1 NC_010524.1 PFAM: regulatory protein TetR; KEGG: hau:Haur_2521 transcriptional regulator, TetR family; TetR family transcriptional regulator 2071655 6160309 Lcho_1914 Leptothrix cholodnii SP-6 TetR family transcriptional regulator YP_001790946.1 2071017 D 395495 CDS YP_001790947.1 171058598 6160310 complement(2071687..2075769) 1 NC_010524.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 2075769 6160310 Lcho_1915 Leptothrix cholodnii SP-6 phosphoribosylformylglycinamidine synthase YP_001790947.1 2071687 R 395495 CDS YP_001790948.1 171058599 6160311 complement(2075827..2076942) 1 NC_010524.1 PFAM: FAD dependent oxidoreductase; KEGG: rme:Rmet_1140 FAD dependent oxidoreductase; FAD dependent oxidoreductase 2076942 6160311 Lcho_1916 Leptothrix cholodnii SP-6 FAD dependent oxidoreductase YP_001790948.1 2075827 R 395495 CDS YP_001790949.1 171058600 6159874 2077034..2077837 1 NC_010524.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: mpt:Mpe_A1760 methionine aminopeptidase; methionine aminopeptidase 2077837 6159874 Lcho_1917 Leptothrix cholodnii SP-6 methionine aminopeptidase YP_001790949.1 2077034 D 395495 CDS YP_001790950.1 171058601 6159875 2077934..2080588 1 NC_010524.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 2080588 6159875 Lcho_1918 Leptothrix cholodnii SP-6 PII uridylyl-transferase YP_001790950.1 2077934 D 395495 CDS YP_001790951.1 171058602 6159876 complement(2080564..2082060) 1 NC_010524.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 2082060 rumA 6159876 rumA Leptothrix cholodnii SP-6 23S rRNA 5-methyluridine methyltransferase YP_001790951.1 2080564 R 395495 CDS YP_001790952.1 171058603 6159877 complement(2082116..2083063) 1 NC_010524.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: mpt:Mpe_A1254 subfamily M23B unassigned peptidase; peptidase M23B 2083063 6159877 Lcho_1920 Leptothrix cholodnii SP-6 peptidase M23B YP_001790952.1 2082116 R 395495 CDS YP_001790953.1 171058604 6159878 complement(2083125..2083976) 1 NC_010524.1 KEGG: mpt:Mpe_A1253 L-isoaspartate(D-aspartate) O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 2083976 6159878 Lcho_1921 Leptothrix cholodnii SP-6 protein-L-isoaspartate O-methyltransferase YP_001790953.1 2083125 R 395495 CDS YP_001790954.1 171058605 6159879 complement(2083973..2084734) 1 NC_010524.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 2084734 surE 6159879 surE Leptothrix cholodnii SP-6 stationary phase survival protein SurE YP_001790954.1 2083973 R 395495 CDS YP_001790955.1 171058606 6159763 2084994..2085740 1 NC_010524.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpt:Mpe_A1249 response regulator; two component LuxR family transcriptional regulator 2085740 6159763 Lcho_1923 Leptothrix cholodnii SP-6 two component LuxR family transcriptional regulator YP_001790955.1 2084994 D 395495 CDS YP_001790956.1 171058607 6159764 complement(2085968..2086396) 1 NC_010524.1 PFAM: UspA domain protein; KEGG: pna:Pnap_0391 UspA domain protein; UspA domain-containing protein 2086396 6159764 Lcho_1924 Leptothrix cholodnii SP-6 UspA domain-containing protein YP_001790956.1 2085968 R 395495 CDS YP_001790957.1 171058608 6159765 2086624..2088183 1 NC_010524.1 TIGRFAM: glutamate--cysteine ligase; KEGG: pol:Bpro_3399 glutamate--cysteine ligase, monofunctional; glutamate--cysteine ligase 2088183 6159765 Lcho_1925 Leptothrix cholodnii SP-6 glutamate--cysteine ligase YP_001790957.1 2086624 D 395495 CDS YP_001790958.1 171058609 6159766 complement(2088190..2088957) 1 NC_010524.1 PFAM: ABC-2 type transporter; KEGG: mpt:Mpe_A0977 ABC transporter permease protein; ABC-2 type transporter 2088957 6159766 Lcho_1926 Leptothrix cholodnii SP-6 ABC-2 type transporter YP_001790958.1 2088190 R 395495 CDS YP_001790959.1 171058610 6159767 complement(2088954..2089880) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0978 ABC transporter, ATP-binding protein; ABC transporter-like protein 2089880 6159767 Lcho_1927 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001790959.1 2088954 R 395495 CDS YP_001790960.1 171058611 6160197 complement(2090156..2092069) 1 NC_010524.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mpt:Mpe_A1955 putative peptidyl-prolyl cis-trans isomerase transmembrane protein; PpiC-type peptidyl-prolyl cis-trans isomerase 2092069 6160197 Lcho_1928 Leptothrix cholodnii SP-6 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001790960.1 2090156 R 395495 CDS YP_001790961.1 171058612 6160199 complement(2092325..2092675) 1 NC_010524.1 PFAM: histone family protein DNA-binding protein; KEGG: mpt:Mpe_A1956 DNA-binding protein Hu-beta; histone family protein DNA-binding protein 2092675 6160199 Lcho_1929 Leptothrix cholodnii SP-6 histone family protein DNA-binding protein YP_001790961.1 2092325 R 395495 CDS YP_001790962.1 171058613 6160200 complement(2092841..2093794) 1 NC_010524.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mpt:Mpe_A1957 putative transmembrane protein; hypothetical protein 2093794 6160200 Lcho_1930 Leptothrix cholodnii SP-6 hypothetical protein YP_001790962.1 2092841 R 395495 CDS YP_001790963.1 171058614 6160436 complement(2093798..2094364) 1 NC_010524.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mpt:Mpe_A1958 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2094364 6160436 Lcho_1931 Leptothrix cholodnii SP-6 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001790963.1 2093798 R 395495 CDS YP_001790964.1 171058615 6160437 complement(2094439..2096517) 1 NC_010524.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 2096517 uvrC 6160437 uvrC Leptothrix cholodnii SP-6 excinuclease ABC subunit C YP_001790964.1 2094439 R 395495 CDS YP_001790965.1 171058616 6160438 2096550..2097767 1 NC_010524.1 KEGG: mpt:Mpe_A1961 hypothetical protein; hypothetical protein 2097767 6160438 Lcho_1933 Leptothrix cholodnii SP-6 hypothetical protein YP_001790965.1 2096550 D 395495 CDS YP_001790966.1 171058617 6160439 2097917..2098471 1 NC_010524.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2098471 6160439 Lcho_1934 Leptothrix cholodnii SP-6 elongation factor P YP_001790966.1 2097917 D 395495 CDS YP_001790967.1 171058618 6160440 complement(2098568..2099281) 1 NC_010524.1 KEGG: mpt:Mpe_A1758 hypothetical protein; hypothetical protein 2099281 6160440 Lcho_1935 Leptothrix cholodnii SP-6 hypothetical protein YP_001790967.1 2098568 R 395495 CDS YP_001790968.1 171058619 6160441 complement(2099299..2099727) 1 NC_010524.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mms:mma_0247 biopolymer transport protein ExbD; biopolymer transport protein ExbD/TolR 2099727 6160441 Lcho_1936 Leptothrix cholodnii SP-6 biopolymer transport protein ExbD/TolR YP_001790968.1 2099299 R 395495 CDS YP_001790969.1 171058620 6163691 complement(2099740..2100159) 1 NC_010524.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: azo:azo0233 putative biopolymer transport protein ExbD; biopolymer transport protein ExbD/TolR 2100159 6163691 Lcho_1937 Leptothrix cholodnii SP-6 biopolymer transport protein ExbD/TolR YP_001790969.1 2099740 R 395495 CDS YP_001790970.1 171058621 6163692 complement(2100181..2100972) 1 NC_010524.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mpt:Mpe_A1755 biopolymer transport ExbB protein; MotA/TolQ/ExbB proton channel 2100972 6163692 Lcho_1938 Leptothrix cholodnii SP-6 MotA/TolQ/ExbB proton channel YP_001790970.1 2100181 R 395495 CDS YP_001790971.1 171058622 6163693 complement(2101058..2103622) 1 NC_010524.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pau:PA14_37730 putative TonB dependent receptor; TonB-dependent receptor 2103622 6163693 Lcho_1939 Leptothrix cholodnii SP-6 TonB-dependent receptor YP_001790971.1 2101058 R 395495 CDS YP_001790972.1 171058623 6162546 complement(2104436..2105224) 1 NC_010524.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: mpt:Mpe_A1349 hypothetical protein; UBA/THIF-type NAD/FAD-binding protein 2105224 6162546 Lcho_1940 Leptothrix cholodnii SP-6 UBA/THIF-type NAD/FAD-binding protein YP_001790972.1 2104436 R 395495 CDS YP_001790973.1 171058624 6162547 complement(2105221..2106336) 1 NC_010524.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: pol:Bpro_1987 protein of unknown function DUF395, YeeE/YedE; hypothetical protein 2106336 6162547 Lcho_1941 Leptothrix cholodnii SP-6 hypothetical protein YP_001790973.1 2105221 R 395495 CDS YP_001790974.1 171058625 6162548 complement(2106388..2107239) 1 NC_010524.1 TIGRFAM: tol-pal system protein YbgF; PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: mpt:Mpe_A1348 putative transmembrane protein; tol-pal system protein YbgF 2107239 6162548 Lcho_1942 Leptothrix cholodnii SP-6 tol-pal system protein YbgF YP_001790974.1 2106388 R 395495 CDS YP_001790975.1 171058626 6161349 complement(2107239..2107829) 1 NC_010524.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: mpt:Mpe_A1347 putative peptidoglycan-associated lipoprotein precursor; peptidoglycan-associated lipoprotein 2107829 6161349 Lcho_1943 Leptothrix cholodnii SP-6 peptidoglycan-associated lipoprotein YP_001790975.1 2107239 R 395495 CDS YP_001790976.1 171058627 6161350 complement(2107889..2109172) 1 NC_010524.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 2109172 tolB 6161350 tolB Leptothrix cholodnii SP-6 translocation protein TolB YP_001790976.1 2107889 R 395495 CDS YP_001790977.1 171058628 6161351 2109422..2110012 1 NC_010524.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: rso:RSc2199 hypothetical protein; peroxidase-like protein 2110012 6161351 Lcho_1945 Leptothrix cholodnii SP-6 peroxidase-like protein YP_001790977.1 2109422 D 395495 CDS YP_001790978.1 171058629 6161352 complement(2110044..2111525) 1 NC_010524.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: mpt:Mpe_A1344 putative ribonuclease G; ribonuclease 2111525 6161352 Lcho_1946 Leptothrix cholodnii SP-6 ribonuclease YP_001790978.1 2110044 R 395495 CDS YP_001790979.1 171058630 6161353 complement(2111533..2112141) 1 NC_010524.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: rfr:Rfer_2081 Maf-like protein; maf protein 2112141 6161353 Lcho_1947 Leptothrix cholodnii SP-6 maf protein YP_001790979.1 2111533 R 395495 CDS YP_001790980.1 171058631 6161354 complement(2112164..2112634) 1 NC_010524.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 2112634 6161354 Lcho_1948 Leptothrix cholodnii SP-6 rRNA large subunit methyltransferase YP_001790980.1 2112164 R 395495 CDS YP_001790981.1 171058632 6162031 complement(2112655..2113407) 1 NC_010524.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: ajs:Ajs_1901 iojap-like protein; iojap family protein 2113407 6162031 Lcho_1949 Leptothrix cholodnii SP-6 iojap family protein YP_001790981.1 2112655 R 395495 CDS YP_001790982.1 171058633 6162032 complement(2113479..2114117) 1 NC_010524.1 KEGG: mpt:Mpe_A1340 nicotinate-nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 2114117 6162032 Lcho_1950 Leptothrix cholodnii SP-6 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_001790982.1 2113479 R 395495 CDS YP_001790983.1 171058634 6162033 complement(2114110..2115057) 1 NC_010524.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 2115057 6162033 Lcho_1951 Leptothrix cholodnii SP-6 coproporphyrinogen III oxidase YP_001790983.1 2114110 R 395495 CDS YP_001790984.1 171058635 6162034 complement(2115073..2116356) 1 NC_010524.1 KEGG: mpt:Mpe_A1338 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase; phosphoribosylamine--glycine ligase 2116356 6162034 Lcho_1952 Leptothrix cholodnii SP-6 phosphoribosylamine--glycine ligase YP_001790984.1 2115073 R 395495 CDS YP_001790985.1 171058636 6162035 complement(2116417..2117142) 1 NC_010524.1 PFAM: protein of unknown function DUF28; KEGG: aav:Aave_3203 protein of unknown function DUF28; hypothetical protein 2117142 6162035 Lcho_1953 Leptothrix cholodnii SP-6 hypothetical protein YP_001790985.1 2116417 R 395495 CDS YP_001790986.1 171058637 6162036 2117347..2118924 1 NC_010524.1 PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: mpt:Mpe_A1336 hypothetical protein; hypothetical protein 2118924 6162036 Lcho_1954 Leptothrix cholodnii SP-6 hypothetical protein YP_001790986.1 2117347 D 395495 CDS YP_001790987.1 171058638 6161744 2118936..2119424 1 NC_010524.1 PFAM: protein of unknown function DUF1499; KEGG: ana:all1003 hypothetical protein; hypothetical protein 2119424 6161744 Lcho_1955 Leptothrix cholodnii SP-6 hypothetical protein YP_001790987.1 2118936 D 395495 CDS YP_001790988.1 171058639 6161745 2119544..2121403 1 NC_010524.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 2121403 6161745 Lcho_1956 Leptothrix cholodnii SP-6 glutaminyl-tRNA synthetase YP_001790988.1 2119544 D 395495 CDS YP_001790989.1 171058640 6161746 complement(2121425..2122066) 1 NC_010524.1 hypothetical protein 2122066 6161746 Lcho_1957 Leptothrix cholodnii SP-6 hypothetical protein YP_001790989.1 2121425 R 395495 CDS YP_001790990.1 171058641 6161747 complement(2122248..2122706) 1 NC_010524.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: mpt:Mpe_A0029 PhnB protein; glyoxalase/bleomycin resistance protein/dioxygenase 2122706 6161747 Lcho_1958 Leptothrix cholodnii SP-6 glyoxalase/bleomycin resistance protein/dioxygenase YP_001790990.1 2122248 R 395495 CDS YP_001790991.1 171058642 6161748 complement(2123271..2124302) 1 NC_010524.1 KEGG: plu:plu0597 hypothetical protein; hypothetical protein 2124302 6161748 Lcho_1959 Leptothrix cholodnii SP-6 hypothetical protein YP_001790991.1 2123271 R 395495 CDS YP_001790992.1 171058643 6161749 complement(2124287..2125855) 1 NC_010524.1 KEGG: plu:plu0598 hypothetical protein; hypothetical protein 2125855 6161749 Lcho_1960 Leptothrix cholodnii SP-6 hypothetical protein YP_001790992.1 2124287 R 395495 CDS YP_001790993.1 171058644 6163828 complement(2126197..2127084) 1 NC_010524.1 PFAM: Integrase catalytic region; KEGG: pol:Bpro_4706 integrase, catalytic region; integrase catalytic subunit 2127084 6163828 Lcho_1961 Leptothrix cholodnii SP-6 integrase catalytic subunit YP_001790993.1 2126197 R 395495 CDS YP_001790994.1 171058645 6163829 complement(2127081..2127380) 1 NC_010524.1 PFAM: transposase IS3/IS911 family protein; KEGG: pol:Bpro_4705 hypothetical protein; transposase IS3/IS911 family protein 2127380 6163829 Lcho_1962 Leptothrix cholodnii SP-6 transposase IS3/IS911 family protein YP_001790994.1 2127081 R 395495 CDS YP_001790995.1 171058646 6163830 2127516..2130053 1 NC_010524.1 hypothetical protein 2130053 6163830 Lcho_1963 Leptothrix cholodnii SP-6 hypothetical protein YP_001790995.1 2127516 D 395495 CDS YP_001790996.1 171058647 6163831 complement(2130734..2131102) 1 NC_010524.1 PFAM: protein of unknown function DUF1428; KEGG: xcb:XC_3061 hypothetical protein; hypothetical protein 2131102 6163831 Lcho_1964 Leptothrix cholodnii SP-6 hypothetical protein YP_001790996.1 2130734 R 395495 CDS YP_001790997.1 171058648 6163832 complement(2131379..2132011) 1 NC_010524.1 KEGG: xom:XOO_0504 hypothetical protein; hypothetical protein 2132011 6163832 Lcho_1965 Leptothrix cholodnii SP-6 hypothetical protein YP_001790997.1 2131379 R 395495 CDS YP_001790998.1 171058649 6163833 complement(2132014..2133288) 1 NC_010524.1 KEGG: xom:XOO_0505 hypothetical protein; hypothetical protein 2133288 6163833 Lcho_1966 Leptothrix cholodnii SP-6 hypothetical protein YP_001790998.1 2132014 R 395495 CDS YP_001790999.1 171058650 6164105 complement(2133285..2133392) 1 NC_010524.1 hypothetical protein 2133392 6164105 Lcho_1967 Leptothrix cholodnii SP-6 hypothetical protein YP_001790999.1 2133285 R 395495 CDS YP_001791000.1 171058651 6164106 complement(2133700..2136777) 1 NC_010524.1 PFAM: acriflavin resistance protein; KEGG: pna:Pnap_1682 acriflavin resistance protein; acriflavin resistance protein 2136777 6164106 Lcho_1968 Leptothrix cholodnii SP-6 acriflavin resistance protein YP_001791000.1 2133700 R 395495 CDS YP_001791001.1 171058652 6164107 complement(2136794..2138050) 1 NC_010524.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pol:Bpro_2282 secretion protein HlyD; RND family efflux transporter MFP subunit 2138050 6164107 Lcho_1969 Leptothrix cholodnii SP-6 RND family efflux transporter MFP subunit YP_001791001.1 2136794 R 395495 CDS YP_001791002.1 171058653 6164108 complement(2138159..2138641) 1 NC_010524.1 PFAM: ribonuclease H; KEGG: rso:RSc1513 ribonuclease H; ribonuclease H 2138641 6164108 Lcho_1970 Leptothrix cholodnii SP-6 ribonuclease H YP_001791002.1 2138159 R 395495 CDS YP_001791003.1 171058654 6164109 complement(2138707..2139528) 1 NC_010524.1 KEGG: pol:Bpro_2280 hypothetical protein; hypothetical protein 2139528 6164109 Lcho_1971 Leptothrix cholodnii SP-6 hypothetical protein YP_001791003.1 2138707 R 395495 CDS YP_001791004.1 171058655 6164110 2139572..2140309 1 NC_010524.1 KEGG: vei:Veis_0591 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase 2140309 6164110 Lcho_1972 Leptothrix cholodnii SP-6 hydroxyacylglutathione hydrolase YP_001791004.1 2139572 D 395495 CDS YP_001791005.1 171058656 6160736 2140306..2142042 1 NC_010524.1 PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; KEGG: mpt:Mpe_A2530 membrane-bound lytic murein transglycosylase D, putative; lytic transglycosylase catalytic subunit 2142042 6160736 Lcho_1973 Leptothrix cholodnii SP-6 lytic transglycosylase catalytic subunit YP_001791005.1 2140306 D 395495 CDS YP_001791006.1 171058657 6160737 complement(2142097..2142693) 1 NC_010524.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 2142693 recR 6160737 recR Leptothrix cholodnii SP-6 recombination protein RecR YP_001791006.1 2142097 R 395495 CDS YP_001791007.1 171058658 6160738 complement(2142722..2143048) 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A2533 hypothetical protein; hypothetical protein 2143048 6160738 Lcho_1975 Leptothrix cholodnii SP-6 hypothetical protein YP_001791007.1 2142722 R 395495 CDS YP_001791008.1 171058659 6160739 complement(2143136..2145088) 1 NC_010524.1 KEGG: mpt:Mpe_A2534 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 2145088 6160739 Lcho_1976 Leptothrix cholodnii SP-6 DNA polymerase III subunits gamma and tau YP_001791008.1 2143136 R 395495 CDS YP_001791009.1 171058660 6160740 2145157..2146275 1 NC_010524.1 PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: ava:Ava_3213 AIR synthase related protein-like; phosphoribosylformylglycinamidine cyclo-ligase 2146275 6160740 Lcho_1977 Leptothrix cholodnii SP-6 phosphoribosylformylglycinamidine cyclo-ligase YP_001791009.1 2145157 D 395495 CDS YP_001791010.1 171058661 6160741 2146319..2147089 1 NC_010524.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2147089 aat 6160741 aat Leptothrix cholodnii SP-6 leucyl/phenylalanyl-tRNA--protein transferase YP_001791010.1 2146319 D 395495 CDS YP_001791011.1 171058662 6163938 2147086..2147829 1 NC_010524.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 2147829 6163938 Lcho_1979 Leptothrix cholodnii SP-6 arginyl-tRNA-protein transferase YP_001791011.1 2147086 D 395495 CDS YP_001791012.1 171058663 6163939 complement(2147864..2148247) 1 NC_010524.1 KEGG: pol:Bpro_3522 hypothetical protein; hypothetical protein 2148247 6163939 Lcho_1980 Leptothrix cholodnii SP-6 hypothetical protein YP_001791012.1 2147864 R 395495 CDS YP_001791013.1 171058664 6163940 2148376..2149137 1 NC_010524.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: aav:Aave_2987 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2149137 6163940 Lcho_1981 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001791013.1 2148376 D 395495 CDS YP_001791014.1 171058665 6163941 complement(2149165..2150349) 1 NC_010524.1 KEGG: dar:Daro_1045 hypothetical protein; hypothetical protein 2150349 6163941 Lcho_1982 Leptothrix cholodnii SP-6 hypothetical protein YP_001791014.1 2149165 R 395495 CDS YP_001791015.1 171058666 6163942 complement(2150743..2151381) 1 NC_010524.1 KEGG: rme:Rmet_1154 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 2151381 6163942 Lcho_1983 Leptothrix cholodnii SP-6 3-oxoacid CoA-transferase subunit B YP_001791015.1 2150743 R 395495 CDS YP_001791016.1 171058667 6163943 complement(2151416..2152117) 1 NC_010524.1 KEGG: mpt:Mpe_A1456 3-oxoacid CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 2152117 6163943 Lcho_1984 Leptothrix cholodnii SP-6 3-oxoacid CoA-transferase subunit A YP_001791016.1 2151416 R 395495 CDS YP_001791017.1 171058668 6163282 2152240..2152797 1 NC_010524.1 PFAM: regulatory protein LuxR; KEGG: rfr:Rfer_2636 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 2152797 6163282 Lcho_1985 Leptothrix cholodnii SP-6 LuxR family transcriptional regulator YP_001791017.1 2152240 D 395495 CDS YP_001791018.1 171058669 6163283 complement(2152818..2153717) 1 NC_010524.1 KEGG: sfu:Sfum_0602 hypothetical protein; hypothetical protein 2153717 6163283 Lcho_1986 Leptothrix cholodnii SP-6 hypothetical protein YP_001791018.1 2152818 R 395495 CDS YP_001791019.1 171058670 6163284 2153887..2154354 1 NC_010524.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rso:RSc0626 probable aldehyde dehydrogenase (subunit III) oxidoreductase protein; 2Fe-2S iron-sulfur cluster-binding domain-containing protein 2154354 6163284 Lcho_1987 Leptothrix cholodnii SP-6 2Fe-2S iron-sulfur cluster-binding domain-containing protein YP_001791019.1 2153887 D 395495 CDS YP_001791020.1 171058671 6163285 2154357..2156549 1 NC_010524.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: gme:Gmet_0837 twin-arginine translocation pathway signal; isoquinoline 1-oxidoreductase 2156549 6163285 Lcho_1988 Leptothrix cholodnii SP-6 isoquinoline 1-oxidoreductase YP_001791020.1 2154357 D 395495 CDS YP_001791021.1 171058672 6163286 complement(2156612..2157610) 1 NC_010524.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pna:Pnap_1622 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 2157610 6163286 Lcho_1989 Leptothrix cholodnii SP-6 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_001791021.1 2156612 R 395495 CDS YP_001791022.1 171058673 6163287 complement(2157636..2159051) 1 NC_010524.1 KEGG: mpt:Mpe_A1510 hypothetical protein; hypothetical protein 2159051 6163287 Lcho_1990 Leptothrix cholodnii SP-6 hypothetical protein YP_001791022.1 2157636 R 395495 CDS YP_001791023.1 171058674 6163239 complement(2159153..2160109) 1 NC_010524.1 PFAM: histone deacetylase superfamily; KEGG: mpt:Mpe_A1507 hypothetical protein; histone deacetylase superfamily protein 2160109 6163239 Lcho_1991 Leptothrix cholodnii SP-6 histone deacetylase superfamily protein YP_001791023.1 2159153 R 395495 CDS YP_001791024.1 171058675 6163240 2160284..2160847 1 NC_010524.1 TIGRFAM: phasin family protein; PFAM: Phasin family protein; KEGG: bmu:Bmul_1136 phasin family protein; phasin family protein 2160847 6163240 Lcho_1992 Leptothrix cholodnii SP-6 phasin family protein YP_001791024.1 2160284 D 395495 CDS YP_001791025.1 171058676 6163241 complement(2160937..2161680) 1 NC_010524.1 hypothetical protein 2161680 6163241 Lcho_1993 Leptothrix cholodnii SP-6 hypothetical protein YP_001791025.1 2160937 R 395495 CDS YP_001791026.1 171058677 6163242 2161860..2162345 1 NC_010524.1 PFAM: protein of unknown function DUF461; KEGG: dac:Daci_2890 protein of unknown function DUF461; hypothetical protein 2162345 6163242 Lcho_1994 Leptothrix cholodnii SP-6 hypothetical protein YP_001791026.1 2161860 D 395495 CDS YP_001791027.1 171058678 6163243 2162359..2162952 1 NC_010524.1 PFAM: electron transport protein SCO1/SenC; KEGG: dac:Daci_1998 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 2162952 6163243 Lcho_1995 Leptothrix cholodnii SP-6 electron transport protein SCO1/SenC YP_001791027.1 2162359 D 395495 CDS YP_001791028.1 171058679 6163244 2163035..2163499 1 NC_010524.1 PFAM: protein of unknown function DUF461; KEGG: dac:Daci_2688 protein of unknown function DUF461; hypothetical protein 2163499 6163244 Lcho_1996 Leptothrix cholodnii SP-6 hypothetical protein YP_001791028.1 2163035 D 395495 CDS YP_001791029.1 171058680 6162403 complement(2163565..2164266) 1 NC_010524.1 KEGG: dra:DR_0834 nitrogen regulator, putative; CRP/FNR family transcriptional regulator 2164266 6162403 Lcho_1997 Leptothrix cholodnii SP-6 CRP/FNR family transcriptional regulator YP_001791029.1 2163565 R 395495 CDS YP_001791030.1 171058681 6162404 complement(2164406..2164786) 1 NC_010524.1 hypothetical protein 2164786 6162404 Lcho_1998 Leptothrix cholodnii SP-6 hypothetical protein YP_001791030.1 2164406 R 395495 CDS YP_001791031.1 171058682 6162405 2164913..2165821 1 NC_010524.1 KEGG: aav:Aave_0652 hypothetical protein; hypothetical protein 2165821 6162405 Lcho_1999 Leptothrix cholodnii SP-6 hypothetical protein YP_001791031.1 2164913 D 395495 CDS YP_001791032.1 171058683 6162406 complement(2165809..2166330) 1 NC_010524.1 KEGG: mpt:Mpe_A1821 hypothetical protein; hypothetical protein 2166330 6162406 Lcho_2000 Leptothrix cholodnii SP-6 hypothetical protein YP_001791032.1 2165809 R 395495 CDS YP_001791033.1 171058684 6162407 complement(2166358..2168985) 1 NC_010524.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 2168985 alaS 6162407 alaS Leptothrix cholodnii SP-6 alanyl-tRNA synthetase YP_001791033.1 2166358 R 395495 CDS YP_001791034.1 171058685 6162408 2169080..2170384 1 NC_010524.1 TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: pna:Pnap_2630 4-aminobutyrate aminotransferase; 4-aminobutyrate aminotransferase 2170384 6162408 Lcho_2002 Leptothrix cholodnii SP-6 4-aminobutyrate aminotransferase YP_001791034.1 2169080 D 395495 CDS YP_001791035.1 171058686 6162364 2170440..2171930 1 NC_010524.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: mpt:Mpe_A2324 succinate-semialdehyde dehydrogenase (NAD(P)+); succinate-semialdehyde dehydrogenase 2171930 6162364 Lcho_2003 Leptothrix cholodnii SP-6 succinate-semialdehyde dehydrogenase YP_001791035.1 2170440 D 395495 CDS YP_001791036.1 171058687 6162365 complement(2171961..2172875) 1 NC_010524.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mpt:Mpe_A2326 GGDEF domain containing protein; diguanylate cyclase 2172875 6162365 Lcho_2004 Leptothrix cholodnii SP-6 diguanylate cyclase YP_001791036.1 2171961 R 395495 CDS YP_001791037.1 171058688 6162366 2173150..2173611 1 NC_010524.1 hypothetical protein 2173611 6162366 Lcho_2005 Leptothrix cholodnii SP-6 hypothetical protein YP_001791037.1 2173150 D 395495 CDS YP_001791038.1 171058689 6162367 2173723..2177190 1 NC_010524.1 KEGG: mpt:Mpe_A1569 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; transcription-repair coupling factor 2177190 6162367 Lcho_2006 Leptothrix cholodnii SP-6 transcription-repair coupling factor YP_001791038.1 2173723 D 395495 CDS YP_001791039.1 171058690 6162368 2177284..2177991 1 NC_010524.1 KEGG: mpt:Mpe_A1568 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase subfamily IB hypothetical 1; Haloacid dehalogenase domain protein hydrolase type 3; phosphoserine phosphatase SerB 2177991 6162368 Lcho_2007 Leptothrix cholodnii SP-6 phosphoserine phosphatase SerB YP_001791039.1 2177284 D 395495 CDS YP_001791040.1 171058691 6162369 complement(2178025..2178891) 1 NC_010524.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: har:HEAR2840 hypothetical protein; putative signal transduction protein 2178891 6162369 Lcho_2008 Leptothrix cholodnii SP-6 putative signal transduction protein YP_001791040.1 2178025 R 395495 CDS YP_001791041.1 171058692 6160760 complement(2179016..2179519) 1 NC_010524.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 2179519 6160760 Lcho_2009 Leptothrix cholodnii SP-6 ribonuclease activity regulator protein RraA YP_001791041.1 2179016 R 395495 CDS YP_001791042.1 171058693 6160761 complement(2179551..2181500) 1 NC_010524.1 PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain; KEGG: mpt:Mpe_A3415 disulfide reductase; protein-disulfide reductase 2181500 6160761 Lcho_2010 Leptothrix cholodnii SP-6 protein-disulfide reductase YP_001791042.1 2179551 R 395495 CDS YP_001791043.1 171058694 6160762 complement(2181518..2182042) 1 NC_010524.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cte:CT1072 thiol:disulfide interchange protein DsbE, putative; redoxin domain-containing protein 2182042 6160762 Lcho_2011 Leptothrix cholodnii SP-6 redoxin domain-containing protein YP_001791043.1 2181518 R 395495 CDS YP_001791044.1 171058695 6160763 complement(2182077..2183342) 1 NC_010524.1 PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0039 major facilitator superfamily MFS_1; major facilitator transporter 2183342 6160763 Lcho_2012 Leptothrix cholodnii SP-6 major facilitator transporter YP_001791044.1 2182077 R 395495 CDS YP_001791045.1 171058696 6160764 2183558..2184949 1 NC_010524.1 KEGG: mpt:Mpe_A1550 hypothetical protein; hypothetical protein 2184949 6160764 Lcho_2013 Leptothrix cholodnii SP-6 hypothetical protein YP_001791045.1 2183558 D 395495 CDS YP_001791046.1 171058697 6160765 2184991..2186259 1 NC_010524.1 hypothetical protein 2186259 6160765 Lcho_2014 Leptothrix cholodnii SP-6 hypothetical protein YP_001791046.1 2184991 D 395495 CDS YP_001791047.1 171058698 6160699 2186357..2187475 1 NC_010524.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 2187475 6160699 Lcho_2015 Leptothrix cholodnii SP-6 quinolinate synthetase YP_001791047.1 2186357 D 395495 CDS YP_001791048.1 171058699 6160700 2187562..2187846 1 NC_010524.1 KEGG: mpt:Mpe_A1552 hypothetical protein; hypothetical protein 2187846 6160700 Lcho_2016 Leptothrix cholodnii SP-6 hypothetical protein YP_001791048.1 2187562 D 395495 CDS YP_001791049.1 171058700 6160701 complement(2187854..2189479) 1 NC_010524.1 KEGG: mpt:Mpe_A1551 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; L-aspartate oxidase 2189479 6160701 Lcho_2017 Leptothrix cholodnii SP-6 L-aspartate oxidase YP_001791049.1 2187854 R 395495 CDS YP_001791050.1 171058701 6160702 2189668..2190909 1 NC_010524.1 KEGG: mpt:Mpe_A1550 hypothetical protein; hypothetical protein 2190909 6160702 Lcho_2018 Leptothrix cholodnii SP-6 hypothetical protein YP_001791050.1 2189668 D 395495 CDS YP_001791051.1 171058702 6160703 complement(2190970..2193567) 1 NC_010524.1 KEGG: mpt:Mpe_A1549 putative ATP-dependent protease (heat shock protein); TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent chaperone ClpB 2193567 6160703 Lcho_2019 Leptothrix cholodnii SP-6 ATP-dependent chaperone ClpB YP_001791051.1 2190970 R 395495 CDS YP_001791052.1 171058703 6160704 complement(2193698..2194177) 1 NC_010524.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: aav:Aave_1248 molybdopterin biosynthesis MoaE; molybdopterin biosynthesis MoaE protein 2194177 6160704 Lcho_2020 Leptothrix cholodnii SP-6 molybdopterin biosynthesis MoaE protein YP_001791052.1 2193698 R 395495 CDS YP_001791053.1 171058704 6163570 complement(2194188..2194439) 1 NC_010524.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: mpt:Mpe_A1545 molybdopterin converting factor subunit 1; molybdopterin converting factor subunit 1 2194439 6163570 Lcho_2021 Leptothrix cholodnii SP-6 molybdopterin converting factor subunit 1 YP_001791053.1 2194188 R 395495 CDS YP_001791054.1 171058705 6163571 complement(2194456..2195766) 1 NC_010524.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mpt:Mpe_A1544 putative molybdopterin biosynthesis MoeA protein; molybdenum cofactor synthesis domain-containing protein 2195766 6163571 Lcho_2022 Leptothrix cholodnii SP-6 molybdenum cofactor synthesis domain-containing protein YP_001791054.1 2194456 R 395495 CDS YP_001791055.1 171058706 6163572 complement(2195735..2196280) 1 NC_010524.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: mpt:Mpe_A1543 putative molybdopterin-guanine dinucleotide biosynthesis protein; molybdopterin-guanine dinucleotide biosynthesis protein B 2196280 6163572 Lcho_2023 Leptothrix cholodnii SP-6 molybdopterin-guanine dinucleotide biosynthesis protein B YP_001791055.1 2195735 R 395495 CDS YP_001791056.1 171058707 6163573 complement(2196318..2197736) 1 NC_010524.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 2197736 6163573 Lcho_2024 Leptothrix cholodnii SP-6 threonine synthase YP_001791056.1 2196318 R 395495 CDS YP_001791057.1 171058708 6163574 complement(2197766..2199082) 1 NC_010524.1 PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; KEGG: aav:Aave_1238 homoserine dehydrogenase; homoserine dehydrogenase 2199082 6163574 Lcho_2025 Leptothrix cholodnii SP-6 homoserine dehydrogenase YP_001791057.1 2197766 R 395495 CDS YP_001791058.1 171058709 6163575 complement(2199145..2200374) 1 NC_010524.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 2200374 6163575 Lcho_2026 Leptothrix cholodnii SP-6 aminotransferase AlaT YP_001791058.1 2199145 R 395495 CDS YP_001791059.1 171058710 6161557 2200527..2200898 1 NC_010524.1 PFAM: protein of unknown function DUF498; KEGG: mpt:Mpe_A1539 hypothetical protein; hypothetical protein 2200898 6161557 Lcho_2027 Leptothrix cholodnii SP-6 hypothetical protein YP_001791059.1 2200527 D 395495 CDS YP_001791060.1 171058711 6161558 2200996..2201472 1 NC_010524.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mpt:Mpe_A1538 putative bacterioferritin comigratory oxidoreductase protein; alkyl hydroperoxide reductase 2201472 6161558 Lcho_2028 Leptothrix cholodnii SP-6 alkyl hydroperoxide reductase YP_001791060.1 2200996 D 395495 CDS YP_001791061.1 171058712 6161559 2201667..2203388 1 NC_010524.1 PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: mpt:Mpe_A1537 PhoH-like ATPase; PhoH family protein 2203388 6161559 Lcho_2029 Leptothrix cholodnii SP-6 PhoH family protein YP_001791061.1 2201667 D 395495 CDS YP_001791062.1 171058713 6161560 complement(2203456..2205384) 1 NC_010524.1 KEGG: mpt:Mpe_A1753 ATPase component ABC-type dipeptide/oligopeptide/nickel transport system; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2205384 6161560 Lcho_2030 Leptothrix cholodnii SP-6 oligopeptide/dipeptide ABC transporter ATPase YP_001791062.1 2203456 R 395495 CDS YP_001791063.1 171058714 6161561 complement(2205381..2206859) 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A1752 ABC type ATPase; binding-protein-dependent transport system inner membrane protein 2206859 6161561 Lcho_2031 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001791063.1 2205381 R 395495 CDS YP_001791064.1 171058715 6161562 complement(2206935..2207918) 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A1751 IM pore protein; binding-protein-dependent transport system inner membrane protein 2207918 6161562 Lcho_2032 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001791064.1 2206935 R 395495 CDS YP_001791065.1 171058716 6162261 complement(2207915..2210140) 1 NC_010524.1 PFAM: extracellular solute-binding protein family 5; KEGG: mpt:Mpe_A1750 putative extracellular solute-binding protein; extracellular solute-binding protein 2210140 6162261 Lcho_2033 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001791065.1 2207915 R 395495 CDS YP_001791066.1 171058717 6162262 complement(2210149..2211075) 1 NC_010524.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: mpt:Mpe_A1749 muramoyltetrapeptide carboxypeptidase; muramoyltetrapeptide carboxypeptidase 2211075 6162262 Lcho_2034 Leptothrix cholodnii SP-6 muramoyltetrapeptide carboxypeptidase YP_001791066.1 2210149 R 395495 CDS YP_001791067.1 171058718 6162263 complement(2211068..2211763) 1 NC_010524.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mpt:Mpe_A1748 putative hydrolase protein; CMP/dCMP deaminase 2211763 6162263 Lcho_2035 Leptothrix cholodnii SP-6 CMP/dCMP deaminase YP_001791067.1 2211068 R 395495 CDS YP_001791068.1 171058719 6162264 2211832..2214405 1 NC_010524.1 KEGG: nmu:Nmul_A1648 ATPase, E1-E2 type; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; HAD superfamily P-type ATPase 2214405 6162264 Lcho_2036 Leptothrix cholodnii SP-6 HAD superfamily P-type ATPase YP_001791068.1 2211832 D 395495 CDS YP_001791069.1 171058720 6162265 complement(2214368..2214844) 1 NC_010524.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: reh:H16_B1084 transcriptional regulator, AsnC-family; AsnC family transcriptional regulator 2214844 6162265 Lcho_2037 Leptothrix cholodnii SP-6 AsnC family transcriptional regulator YP_001791069.1 2214368 R 395495 CDS YP_001791070.1 171058721 6162266 2215071..2216045 1 NC_010524.1 PFAM: protein of unknown function DUF534; KEGG: bbr:BB3356 hypothetical protein; hypothetical protein 2216045 6162266 Lcho_2038 Leptothrix cholodnii SP-6 hypothetical protein YP_001791070.1 2215071 D 395495 CDS YP_001791071.1 171058722 6161947 2216096..2217037 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: reh:H16_A1398 ABC-type transporter, permease component; inner-membrane translocator 2217037 6161947 Lcho_2039 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001791071.1 2216096 D 395495 CDS YP_001791072.1 171058723 6161948 2217037..2217831 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rme:Rmet_1209 ABC transporter-related protein; ABC transporter-like protein 2217831 6161948 Lcho_2040 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001791072.1 2217037 D 395495 CDS YP_001791073.1 171058724 6161949 2217935..2219161 1 NC_010524.1 PFAM: Glu/Leu/Phe/Val dehydrogenase; KEGG: rha:RHA1_ro03043 glutamate dehydrogenase (NAD(P)+); Glu/Leu/Phe/Val dehydrogenase 2219161 6161949 Lcho_2041 Leptothrix cholodnii SP-6 Glu/Leu/Phe/Val dehydrogenase YP_001791073.1 2217935 D 395495 CDS YP_001791074.1 171058725 6161950 2219206..2220282 1 NC_010524.1 KEGG: ppu:PP_3433 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 2220282 6161950 Lcho_2042 Leptothrix cholodnii SP-6 4-hydroxyphenylpyruvate dioxygenase YP_001791074.1 2219206 D 395495 CDS YP_001791075.1 171058726 6161951 2220279..2220830 1 NC_010524.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pna:Pnap_1119 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2220830 6161951 Lcho_2043 Leptothrix cholodnii SP-6 glyoxalase/bleomycin resistance protein/dioxygenase YP_001791075.1 2220279 D 395495 CDS YP_001791076.1 171058727 6161952 2220827..2222122 1 NC_010524.1 KEGG: pol:Bpro_2996 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969; fumarylacetoacetase 2222122 6161952 Lcho_2044 Leptothrix cholodnii SP-6 fumarylacetoacetase YP_001791076.1 2220827 D 395495 CDS YP_001791077.1 171058728 6163491 2222122..2222445 1 NC_010524.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: sal:Sala_1825 transcriptional coactivator/pterin dehydratase; transcriptional coactivator/pterin dehydratase 2222445 6163491 Lcho_2045 Leptothrix cholodnii SP-6 transcriptional coactivator/pterin dehydratase YP_001791077.1 2222122 D 395495 CDS YP_001791078.1 171058729 6163492 2222459..2223370 1 NC_010524.1 phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase 2223370 phhA 6163492 phhA Leptothrix cholodnii SP-6 phenylalanine 4-monooxygenase YP_001791078.1 2222459 D 395495 CDS YP_001791079.1 171058730 6163493 2223367..2224068 1 NC_010524.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_0167 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2224068 6163493 Lcho_2047 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001791079.1 2223367 D 395495 CDS YP_001791080.1 171058731 6163494 complement(2224095..2227295) 1 NC_010524.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: ajs:Ajs_1232 heavy metal efflux pump, CzcA family; CzcA family heavy metal efflux protein 2227295 6163494 Lcho_2048 Leptothrix cholodnii SP-6 CzcA family heavy metal efflux protein YP_001791080.1 2224095 R 395495 CDS YP_001791081.1 171058732 6163495 complement(2227292..2228863) 1 NC_010524.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: pap:PSPA7_4014 heavy metal RND efflux membrane fusion protein, CzcB family; RND family efflux transporter MFP subunit 2228863 6163495 Lcho_2049 Leptothrix cholodnii SP-6 RND family efflux transporter MFP subunit YP_001791081.1 2227292 R 395495 CDS YP_001791082.1 171058733 6163496 complement(2228869..2230104) 1 NC_010524.1 KEGG: pfo:Pfl_2394 heavy metal RND efflux outer membrane protein, CzcC family; CzcC family heavy metal RND efflux outer membrane protein 2230104 6163496 Lcho_2050 Leptothrix cholodnii SP-6 CzcC family heavy metal RND efflux outer membrane protein YP_001791082.1 2228869 R 395495 CDS YP_001791083.1 171058734 6160587 complement(2230183..2230575) 1 NC_010524.1 KEGG: pol:Bpro_3494 hypothetical protein; hypothetical protein 2230575 6160587 Lcho_2051 Leptothrix cholodnii SP-6 hypothetical protein YP_001791083.1 2230183 R 395495 CDS YP_001791084.1 171058735 6160588 2230808..2230966 1 NC_010524.1 KEGG: reu:Reut_A2520 hypothetical protein; hypothetical protein 2230966 6160588 Lcho_2052 Leptothrix cholodnii SP-6 hypothetical protein YP_001791084.1 2230808 D 395495 CDS YP_001791085.1 171058736 6160589 2231094..2232533 1 NC_010524.1 PFAM: protein of unknown function DUF195; KEGG: mpt:Mpe_A1514 hypothetical protein; hypothetical protein 2232533 6160589 Lcho_2053 Leptothrix cholodnii SP-6 hypothetical protein YP_001791085.1 2231094 D 395495 CDS YP_001791086.1 171058737 6160590 complement(2232546..2234513) 1 NC_010524.1 TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; PFAM: FAD dependent oxidoreductase; protein of unknown function DUF752; KEGG: mpt:Mpe_A1964 hypothetical protein; tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC 2234513 6160590 Lcho_2054 Leptothrix cholodnii SP-6 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC YP_001791086.1 2232546 R 395495 CDS YP_001791087.1 171058738 6160591 2234595..2235995 1 NC_010524.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; 30S ribosomal protein S12 methylthiotransferase 2235995 rimO 6160591 rimO Leptothrix cholodnii SP-6 30S ribosomal protein S12 methylthiotransferase YP_001791087.1 2234595 D 395495 CDS YP_001791088.1 171058739 6160592 2236017..2237216 1 NC_010524.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: mpt:Mpe_A1615 putative cystathionine beta-lyase; Cys/Met metabolism pyridoxal-phosphate-dependent protein 2237216 6160592 Lcho_2056 Leptothrix cholodnii SP-6 Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_001791088.1 2236017 D 395495 CDS YP_001791089.1 171058740 6160990 complement(2237220..2237684) 1 NC_010524.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2237684 smpB 6160990 smpB Leptothrix cholodnii SP-6 SsrA-binding protein YP_001791089.1 2237220 R 395495 CDS YP_001791090.1 171058741 6160991 2237769..2238236 1 NC_010524.1 PFAM: cyclase/dehydrase; KEGG: mpt:Mpe_A1617 hypothetical protein; cyclase/dehydrase 2238236 6160991 Lcho_2058 Leptothrix cholodnii SP-6 cyclase/dehydrase YP_001791090.1 2237769 D 395495 CDS YP_001791091.1 171058742 6160992 2238223..2238603 1 NC_010524.1 PFAM: protein of unknown function UPF0125; KEGG: mpt:Mpe_A1618 hypothetical protein; hypothetical protein 2238603 6160992 Lcho_2059 Leptothrix cholodnii SP-6 hypothetical protein YP_001791091.1 2238223 D 395495 CDS YP_001791092.1 171058743 6160993 complement(2238617..2239162) 1 NC_010524.1 KEGG: mpt:Mpe_A1619 putative transmembrane protein; putative transmembrane protein 2239162 6160993 Lcho_2060 Leptothrix cholodnii SP-6 putative transmembrane protein YP_001791092.1 2238617 R 395495 CDS YP_001791093.1 171058744 6160994 2239273..2240742 1 NC_010524.1 KEGG: mpt:Mpe_A1620 IMP dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase 2240742 6160994 Lcho_2061 Leptothrix cholodnii SP-6 inosine-5'-monophosphate dehydrogenase YP_001791093.1 2239273 D 395495 CDS YP_001791094.1 171058745 6160995 2240755..2242065 1 NC_010524.1 PFAM: major facilitator superfamily MFS_1; KEGG: mpt:Mpe_A1621 tetracycline-efflux transporter; major facilitator transporter 2242065 6160995 Lcho_2062 Leptothrix cholodnii SP-6 major facilitator transporter YP_001791094.1 2240755 D 395495 CDS YP_001791095.1 171058746 6162827 2242073..2243671 1 NC_010524.1 KEGG: bmu:Bmul_1287 GMP synthase, large subunit; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: glutamine amidotransferase class-I; GMP synthase domain protein; GMP synthase 2243671 6162827 Lcho_2063 Leptothrix cholodnii SP-6 GMP synthase YP_001791095.1 2242073 D 395495 CDS YP_001791096.1 171058747 6162828 2243713..2245035 1 NC_010524.1 PFAM: Chloride channel core; KEGG: psb:Psyr_1486 Cl-channel, voltage gated; chloride channel core 2245035 6162828 Lcho_2064 Leptothrix cholodnii SP-6 chloride channel core YP_001791096.1 2243713 D 395495 CDS YP_001791097.1 171058748 6162829 complement(2245049..2245492) 1 NC_010524.1 PFAM: thioesterase superfamily protein; KEGG: rfr:Rfer_3014 thioesterase superfamily; thioesterase superfamily protein 2245492 6162829 Lcho_2065 Leptothrix cholodnii SP-6 thioesterase superfamily protein YP_001791097.1 2245049 R 395495 CDS YP_001791098.1 171058749 6162830 complement(2245529..2246197) 1 NC_010524.1 PFAM: protein of unknown function DUF480; KEGG: bmu:Bmul_3231 protein of unknown function DUF480; hypothetical protein 2246197 6162830 Lcho_2066 Leptothrix cholodnii SP-6 hypothetical protein YP_001791098.1 2245529 R 395495 CDS YP_001791099.1 171058750 6162831 complement(2246217..2246999) 1 NC_010524.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mpt:Mpe_A1448 short chain dehydrogenase; short chain dehydrogenase 2246999 6162831 Lcho_2067 Leptothrix cholodnii SP-6 short chain dehydrogenase YP_001791099.1 2246217 R 395495 CDS YP_001791100.1 171058751 6162832 complement(2247103..2249292) 1 NC_010524.1 KEGG: pmy:Pmen_4512 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2249292 6162832 Lcho_2068 Leptothrix cholodnii SP-6 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001791100.1 2247103 R 395495 CDS YP_001791101.1 171058752 6163528 2249604..2251289 1 NC_010524.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: pol:Bpro_1895 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 2251289 6163528 Lcho_2069 Leptothrix cholodnii SP-6 electron-transferring-flavoprotein dehydrogenase YP_001791101.1 2249604 D 395495 CDS YP_001791102.1 171058753 6163529 2251478..2253766 1 NC_010524.1 binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); cellulose synthase regulator protein 2253766 6163529 Lcho_2070 Leptothrix cholodnii SP-6 cellulose synthase regulator protein YP_001791102.1 2251478 D 395495 CDS YP_001791103.1 171058754 6163530 2253814..2254953 1 NC_010524.1 catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans; endo-1,4-D-glucanase 2254953 6163530 Lcho_2071 Leptothrix cholodnii SP-6 endo-1,4-D-glucanase YP_001791103.1 2253814 D 395495 CDS YP_001791104.1 171058755 6163531 2254923..2258657 1 NC_010524.1 PFAM: TPR repeat-containing protein; cellulose synthase operon C domain protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rme:Rmet_2252 cellulose synthase operon C-like protein; cellulose synthase domain-containing protein 2258657 6163531 Lcho_2072 Leptothrix cholodnii SP-6 cellulose synthase domain-containing protein YP_001791104.1 2254923 D 395495 CDS YP_001791105.1 171058756 6163532 complement(2258673..2260262) 1 NC_010524.1 TIGRFAM: cellulose synthase operon protein YhjU; KEGG: mms:mma_1625 hypothetical protein; cellulose synthase operon protein YhjU 2260262 6163532 Lcho_2073 Leptothrix cholodnii SP-6 cellulose synthase operon protein YhjU YP_001791105.1 2258673 R 395495 CDS YP_001791106.1 171058757 6163533 complement(2260274..2262829) 1 NC_010524.1 KEGG: bch:Bcen2424_1385 cellulose synthase (UDP-forming); TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ; cellulose synthase catalytic subunit 2262829 6163533 Lcho_2074 Leptothrix cholodnii SP-6 cellulose synthase catalytic subunit YP_001791106.1 2260274 R 395495 CDS YP_001791107.1 171058758 6162453 complement(2262924..2263706) 1 NC_010524.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: msm:MSMEG_1594 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 2263706 6162453 Lcho_2075 Leptothrix cholodnii SP-6 enoyl-CoA hydratase/isomerase YP_001791107.1 2262924 R 395495 CDS YP_001791108.1 171058759 6162454 complement(2263738..2265408) 1 NC_010524.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mpt:Mpe_A1435 putative CoA ligase (AMP-forming); AMP-dependent synthetase and ligase 2265408 6162454 Lcho_2076 Leptothrix cholodnii SP-6 AMP-dependent synthetase and ligase YP_001791108.1 2263738 R 395495 CDS YP_001791109.1 171058760 6162455 2265513..2266685 1 NC_010524.1 TIGRFAM: lytic murein transglycosylase B; KEGG: mpt:Mpe_A1242 putative membrane-bound lytic murein transglycosylase B protein; lytic murein transglycosylase B 2266685 6162455 Lcho_2077 Leptothrix cholodnii SP-6 lytic murein transglycosylase B YP_001791109.1 2265513 D 395495 CDS YP_001791110.1 171058761 6162456 2266744..2268708 1 NC_010524.1 PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A1802 putative ATP-binding ABC transporter protein; ABC transporter-like protein 2268708 6162456 Lcho_2078 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001791110.1 2266744 D 395495 CDS YP_001791111.1 171058762 6162457 2268763..2269932 1 NC_010524.1 PFAM: Radical SAM domain protein; KEGG: mpt:Mpe_A2509 hypothetical protein; radical SAM domain-containing protein 2269932 6162457 Lcho_2079 Leptothrix cholodnii SP-6 radical SAM domain-containing protein YP_001791111.1 2268763 D 395495 CDS YP_001791112.1 171058763 6162458 2270242..2270667 1 NC_010524.1 PFAM: OsmC family protein; KEGG: psa:PST_0169 organic hydroperoxide resistance protein; OsmC family protein 2270667 6162458 Lcho_2080 Leptothrix cholodnii SP-6 OsmC family protein YP_001791112.1 2270242 D 395495 CDS YP_001791113.1 171058764 6162346 complement(2270698..2271627) 1 NC_010524.1 PFAM: Asparaginase/glutaminase; KEGG: mpt:Mpe_A1865 asparaginase; asparaginase 2271627 6162346 Lcho_2081 Leptothrix cholodnii SP-6 asparaginase YP_001791113.1 2270698 R 395495 CDS YP_001791114.1 171058765 6162347 2271824..2272519 1 NC_010524.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 2272519 6162347 Lcho_2082 Leptothrix cholodnii SP-6 LexA repressor YP_001791114.1 2271824 D 395495 CDS YP_001791115.1 171058766 6162348 2272823..2272924 1 NC_010524.1 hypothetical protein 2272924 6162348 Lcho_2083 Leptothrix cholodnii SP-6 hypothetical protein YP_001791115.1 2272823 D 395495 CDS YP_001791116.1 171058767 6162349 2272954..2274033 1 NC_010524.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 2274033 6162349 Lcho_2084 Leptothrix cholodnii SP-6 tRNA 2-selenouridine synthase YP_001791116.1 2272954 D 395495 CDS YP_001791117.1 171058768 6162350 complement(2274131..2274868) 1 NC_010524.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 2274868 fabG 6162350 fabG Leptothrix cholodnii SP-6 3-ketoacyl-ACP reductase YP_001791117.1 2274131 R 395495 CDS YP_001791118.1 171058769 6162351 complement(2275045..2276223) 1 NC_010524.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 2276223 6162351 Lcho_2086 Leptothrix cholodnii SP-6 acetyl-CoA acetyltransferase YP_001791118.1 2275045 R 395495 CDS YP_001791119.1 171058770 6162062 complement(2276302..2278062) 1 NC_010524.1 TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: mpt:Mpe_A1870 putative poly-beta-hydroxybutyrate polymerase transmembrane protein; poly(R)-hydroxyalkanoic acid synthase 2278062 6162062 Lcho_2087 Leptothrix cholodnii SP-6 poly(R)-hydroxyalkanoic acid synthase YP_001791119.1 2276302 R 395495 CDS YP_001791120.1 171058771 6162063 2278214..2278510 1 NC_010524.1 KEGG: rfr:Rfer_2563 hypothetical protein; hypothetical protein 2278510 6162063 Lcho_2088 Leptothrix cholodnii SP-6 hypothetical protein YP_001791120.1 2278214 D 395495 CDS YP_001791121.1 171058772 6162064 complement(2278430..2279251) 1 NC_010524.1 PFAM: protein of unknown function DUF152; KEGG: mpt:Mpe_A1871 hypothetical protein; hypothetical protein 2279251 6162064 Lcho_2089 Leptothrix cholodnii SP-6 hypothetical protein YP_001791121.1 2278430 R 395495 CDS YP_001791122.1 171058773 6162065 complement(2279252..2279893) 1 NC_010524.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: mpt:Mpe_A1872 putative glutathione-S-transferase; maleylacetoacetate isomerase 2279893 6162065 Lcho_2090 Leptothrix cholodnii SP-6 maleylacetoacetate isomerase YP_001791122.1 2279252 R 395495 CDS YP_001791123.1 171058774 6162066 2279973..2280518 1 NC_010524.1 PFAM: NUDIX hydrolase; KEGG: mpt:Mpe_A1874 hypothetical protein; NUDIX hydrolase 2280518 6162066 Lcho_2091 Leptothrix cholodnii SP-6 NUDIX hydrolase YP_001791123.1 2279973 D 395495 CDS YP_001791124.1 171058775 6162067 2280641..2282863 1 NC_010524.1 KEGG: mpt:Mpe_A1875 putative ABC transporter; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; type I secretion system ATPase 2282863 6162067 Lcho_2092 Leptothrix cholodnii SP-6 type I secretion system ATPase YP_001791124.1 2280641 D 395495 CDS YP_001791125.1 171058776 6160871 2282860..2284266 1 NC_010524.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: mpt:Mpe_A1876 HlyD family secretion protein; HlyD family type I secretion membrane fusion protein 2284266 6160871 Lcho_2093 Leptothrix cholodnii SP-6 HlyD family type I secretion membrane fusion protein YP_001791125.1 2282860 D 395495 CDS YP_001791126.1 171058777 6160872 2284584..2288870 1 NC_010524.1 TIGRFAM: outer membrane adhesin like proteiin; KEGG: prw:PsycPRwf_1167 putative outer membrane adhesin like proteiin; outer membrane adhesin-like protein 2288870 6160872 Lcho_2094 Leptothrix cholodnii SP-6 outer membrane adhesin-like protein YP_001791126.1 2284584 D 395495 CDS YP_001791127.1 171058778 6160873 complement(2288881..2290779) 1 NC_010524.1 PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; KEGG: mpt:Mpe_A1878 hypothetical protein; diguanylate cyclase/phosphodiesterase 2290779 6160873 Lcho_2095 Leptothrix cholodnii SP-6 diguanylate cyclase/phosphodiesterase YP_001791127.1 2288881 R 395495 CDS YP_001791128.1 171058779 6160874 complement(2290805..2291542) 1 NC_010524.1 KEGG: mpt:Mpe_A1879 hypothetical protein; hypothetical protein 2291542 6160874 Lcho_2096 Leptothrix cholodnii SP-6 hypothetical protein YP_001791128.1 2290805 R 395495 CDS YP_001791129.1 171058780 6160875 2291781..2293682 1 NC_010524.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: mpt:Mpe_A1880 outer membrane protein; TolC family type I secretion outer membrane protein 2293682 6160875 Lcho_2097 Leptothrix cholodnii SP-6 TolC family type I secretion outer membrane protein YP_001791129.1 2291781 D 395495 CDS YP_001791130.1 171058781 6160876 complement(2293710..2294558) 1 NC_010524.1 TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mpt:Mpe_A1081 arginase; arginase 2294558 6160876 Lcho_2098 Leptothrix cholodnii SP-6 arginase YP_001791130.1 2293710 R 395495 CDS YP_001791131.1 171058782 6161419 complement(2294636..2295547) 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A1082 hypothetical protein; hypothetical protein 2295547 6161419 Lcho_2099 Leptothrix cholodnii SP-6 hypothetical protein YP_001791131.1 2294636 R 395495 CDS YP_001791132.1 171058783 6161420 complement(2295615..2296370) 1 NC_010524.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: mpt:Mpe_A1083 putative molybdopterin biosynthesis protein; UBA/THIF-type NAD/FAD-binding protein 2296370 6161420 Lcho_2100 Leptothrix cholodnii SP-6 UBA/THIF-type NAD/FAD-binding protein YP_001791132.1 2295615 R 395495 CDS YP_001791133.1 171058784 6161421 complement(2296457..2297905) 1 NC_010524.1 KEGG: mpt:Mpe_A1084 C-terminal processing peptidase; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 2297905 6161421 Lcho_2101 Leptothrix cholodnii SP-6 carboxyl-terminal protease YP_001791133.1 2296457 R 395495 CDS YP_001791134.1 171058785 6161422 complement(2298079..2299149) 1 NC_010524.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mpt:Mpe_A1085 putative transport system ATP-binding protein; ABC transporter-like protein 2299149 6161422 Lcho_2102 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001791134.1 2298079 R 395495 CDS YP_001791135.1 171058786 6161423 2299239..2300870 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A1086 ABC-type Fe3+ transport system, permease component; binding-protein-dependent transport system inner membrane protein 2300870 6161423 Lcho_2103 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001791135.1 2299239 D 395495 CDS YP_001791136.1 171058787 6161424 2301175..2302695 1 NC_010524.1 PFAM: Aldehyde Dehydrogenase_; KEGG: pna:Pnap_3013 aldehyde dehydrogenase (NAD(+)); aldehyde dehydrogenase 2302695 6161424 Lcho_2104 Leptothrix cholodnii SP-6 aldehyde dehydrogenase YP_001791136.1 2301175 D 395495 CDS YP_001791137.1 171058788 6161343 2302812..2303180 1 NC_010524.1 PFAM: protein of unknown function DUF779; KEGG: aeh:Mlg_2727 protein of unknown function DUF779; hypothetical protein 2303180 6161343 Lcho_2105 Leptothrix cholodnii SP-6 hypothetical protein YP_001791137.1 2302812 D 395495 CDS YP_001791138.1 171058789 6161344 2303230..2304078 1 NC_010524.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 2304078 queF 6161344 queF Leptothrix cholodnii SP-6 7-cyano-7-deazaguanine reductase YP_001791138.1 2303230 D 395495 CDS YP_001791139.1 171058790 6161345 2304120..2304479 1 NC_010524.1 PFAM: arsenate reductase and related; KEGG: aav:Aave_1859 arsenate reductase; arsenate reductase-like protein 2304479 6161345 Lcho_2107 Leptothrix cholodnii SP-6 arsenate reductase-like protein YP_001791139.1 2304120 D 395495 CDS YP_001791140.1 171058791 6161346 2304639..2305001 1 NC_010524.1 PFAM: Roadblock/LC7 family protein; KEGG: noc:Noc_1488 Roadblock/LC7; roadblock/LC7 family protein 2305001 6161346 Lcho_2108 Leptothrix cholodnii SP-6 roadblock/LC7 family protein YP_001791140.1 2304639 D 395495 CDS YP_001791141.1 171058792 6161347 2305001..2305774 1 NC_010524.1 KEGG: noc:Noc_1486 ABC-type phosphate/phosphonate transport system periplasmic component; ABC-type phosphate/phosphonate transport system periplasmic component-like protein 2305774 6161347 Lcho_2109 Leptothrix cholodnii SP-6 ABC-type phosphate/phosphonate transport system periplasmic component-like protein YP_001791141.1 2305001 D 395495 CDS YP_001791142.1 171058793 6161348 complement(2305795..2306946) 1 NC_010524.1 KEGG: mmw:Mmwyl1_3836 hypothetical protein; hypothetical protein 2306946 6161348 Lcho_2110 Leptothrix cholodnii SP-6 hypothetical protein YP_001791142.1 2305795 R 395495 CDS YP_001791143.1 171058794 6162018 2307035..2308951 1 NC_010524.1 PFAM: protein of unknown function DUF839; KEGG: mpt:Mpe_A3526 hypothetical protein; hypothetical protein 2308951 6162018 Lcho_2111 Leptothrix cholodnii SP-6 hypothetical protein YP_001791143.1 2307035 D 395495 CDS YP_001791144.1 171058795 6162019 2309050..2310033 1 NC_010524.1 KEGG: vei:Veis_2448 hypothetical protein; hypothetical protein 2310033 6162019 Lcho_2112 Leptothrix cholodnii SP-6 hypothetical protein YP_001791144.1 2309050 D 395495 CDS YP_001791145.1 171058796 6162020 2310065..2310772 1 NC_010524.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2310772 6162020 Lcho_2113 Leptothrix cholodnii SP-6 riboflavin synthase subunit alpha YP_001791145.1 2310065 D 395495 CDS YP_001791146.1 171058797 6162021 2310789..2311340 1 NC_010524.1 PFAM: protein of unknown function DUF1415; KEGG: xac:XAC3675 hypothetical protein; hypothetical protein 2311340 6162021 Lcho_2114 Leptothrix cholodnii SP-6 hypothetical protein YP_001791146.1 2310789 D 395495 CDS YP_001791147.1 171058798 6162022 complement(2311423..2312343) 1 NC_010524.1 PFAM: pyruvate carboxyltransferase; KEGG: mpt:Mpe_A3354 hydroxymethylglutaryl-CoA lyase; pyruvate carboxyltransferase 2312343 6162022 Lcho_2115 Leptothrix cholodnii SP-6 pyruvate carboxyltransferase YP_001791147.1 2311423 R 395495 CDS YP_001791148.1 171058799 6162023 complement(2312366..2314444) 1 NC_010524.1 PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mpt:Mpe_A3356 putative acyl-CoA carboxylase alpha chain protein; carbamoyl-phosphate synthase L chain ATP-binding 2314444 6162023 Lcho_2116 Leptothrix cholodnii SP-6 carbamoyl-phosphate synthase L chain ATP-binding YP_001791148.1 2312366 R 395495 CDS YP_001791149.1 171058800 6162037 complement(2314457..2315245) 1 NC_010524.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rso:RSc0267 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 2315245 6162037 Lcho_2117 Leptothrix cholodnii SP-6 enoyl-CoA hydratase/isomerase YP_001791149.1 2314457 R 395495 CDS YP_001791150.1 171058801 6162038 complement(2315248..2316870) 1 NC_010524.1 PFAM: carboxyl transferase; KEGG: mpt:Mpe_A3359 propionyl-CoA carboxylase; propionyl-CoA carboxylase 2316870 6162038 Lcho_2118 Leptothrix cholodnii SP-6 propionyl-CoA carboxylase YP_001791150.1 2315248 R 395495 CDS YP_001791151.1 171058802 6162039 complement(2316872..2318044) 1 NC_010524.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mpt:Mpe_A3360 acyl-CoA dehydrogenase, probably isovaleryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 2318044 6162039 Lcho_2119 Leptothrix cholodnii SP-6 acyl-CoA dehydrogenase domain-containing protein YP_001791151.1 2316872 R 395495 CDS YP_001791152.1 171058803 6162040 2318223..2318927 1 NC_010524.1 PFAM: regulatory protein TetR; KEGG: mpt:Mpe_A3361 putative TetR family transcriptional regulator; TetR family transcriptional regulator 2318927 6162040 Lcho_2120 Leptothrix cholodnii SP-6 TetR family transcriptional regulator YP_001791152.1 2318223 D 395495 CDS YP_001791153.1 171058804 6162041 2319009..2319245 1 NC_010524.1 KEGG: eba:ebA4129 hypothetical protein; hypothetical protein 2319245 6162041 Lcho_2121 Leptothrix cholodnii SP-6 hypothetical protein YP_001791153.1 2319009 D 395495 CDS YP_001791154.1 171058805 6162042 complement(2319283..2320386) 1 NC_010524.1 PFAM: acyltransferase 3; KEGG: reu:Reut_B3984 acyltransferase 3; acyltransferase 3 2320386 6162042 Lcho_2122 Leptothrix cholodnii SP-6 acyltransferase 3 YP_001791154.1 2319283 R 395495 CDS YP_001791155.1 171058806 6162712 complement(2320383..2324120) 1 NC_010524.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: mpt:Mpe_A2968 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase 2324120 6162712 Lcho_2123 Leptothrix cholodnii SP-6 5-oxoprolinase YP_001791155.1 2320383 R 395495 CDS YP_001791156.1 171058807 6162713 complement(2324139..2325317) 1 NC_010524.1 PFAM: methyltransferase small; ribosomal L11 methyltransferase; Methyltransferase type 12; KEGG: azo:azo3853 hypothetical protein; methyltransferase small 2325317 6162713 Lcho_2124 Leptothrix cholodnii SP-6 methyltransferase small YP_001791156.1 2324139 R 395495 CDS YP_001791157.1 171058808 6162714 complement(2325295..2325735) 1 NC_010524.1 KEGG: yli:YALI0B14795g hypothetical protein; hypothetical protein 2325735 6162714 Lcho_2125 Leptothrix cholodnii SP-6 hypothetical protein YP_001791157.1 2325295 R 395495 CDS YP_001791158.1 171058809 6162715 complement(2325796..2326815) 1 NC_010524.1 PFAM: dihydrouridine synthase DuS; KEGG: ajs:Ajs_3192 dihydrouridine synthase, DuS; dihydrouridine synthase DuS 2326815 6162715 Lcho_2126 Leptothrix cholodnii SP-6 dihydrouridine synthase DuS YP_001791158.1 2325796 R 395495 CDS YP_001791159.1 171058810 6162716 2327005..2327511 1 NC_010524.1 KEGG: ilo:IL0575 predicted secreted protein; hypothetical protein 2327511 6162716 Lcho_2127 Leptothrix cholodnii SP-6 hypothetical protein YP_001791159.1 2327005 D 395495 CDS YP_001791160.1 171058811 6162717 complement(2327552..2328163) 1 NC_010524.1 PFAM: protein of unknown function DUF924; KEGG: bxe:Bxe_A3243 putative transmembrane protein; hypothetical protein 2328163 6162717 Lcho_2128 Leptothrix cholodnii SP-6 hypothetical protein YP_001791160.1 2327552 R 395495 CDS YP_001791161.1 171058812 6161622 complement(2328259..2331249) 1 NC_010524.1 PFAM: ferredoxin; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: chy:CHY_2596 putative nitrate reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2331249 6161622 Lcho_2129 Leptothrix cholodnii SP-6 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001791161.1 2328259 R 395495 CDS YP_001791162.1 171058813 6161623 2331561..2332292 1 NC_010524.1 KEGG: afu:AF0417 A. fulgidus predicted coding region AF0417; hypothetical protein 2332292 6161623 Lcho_2130 Leptothrix cholodnii SP-6 hypothetical protein YP_001791162.1 2331561 D 395495 CDS YP_001791163.1 171058814 6161624 2332302..2333111 1 NC_010524.1 KEGG: pin:Ping_2136 hypothetical protein; hypothetical protein 2333111 6161624 Lcho_2131 Leptothrix cholodnii SP-6 hypothetical protein YP_001791163.1 2332302 D 395495 CDS YP_001791164.1 171058815 6161625 2333115..2333804 1 NC_010524.1 hypothetical protein 2333804 6161625 Lcho_2132 Leptothrix cholodnii SP-6 hypothetical protein YP_001791164.1 2333115 D 395495 CDS YP_001791165.1 171058816 6161626 complement(2333839..2336271) 1 NC_010524.1 PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aav:Aave_2437 radical SAM N-terminal domain protein; radical SAM domain-containing protein 2336271 6161626 Lcho_2133 Leptothrix cholodnii SP-6 radical SAM domain-containing protein YP_001791165.1 2333839 R 395495 CDS YP_001791166.1 171058817 6161627 complement(2336442..2336660) 1 NC_010524.1 KEGG: mpt:Mpe_A1301 hypothetical protein; hypothetical protein 2336660 6161627 Lcho_2134 Leptothrix cholodnii SP-6 hypothetical protein YP_001791166.1 2336442 R 395495 CDS YP_001791167.1 171058818 6162919 complement(2336928..2338820) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo0660 ABC transporter permease and ATP-binding protein; ABC transporter-like protein 2338820 6162919 Lcho_2135 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001791167.1 2336928 R 395495 CDS YP_001791168.1 171058819 6162920 2338991..2340010 1 NC_010524.1 PFAM: extracellular solute-binding protein family 3; KEGG: rfr:Rfer_2324 extracellular solute-binding protein, family 3; extracellular solute-binding protein 2340010 6162920 Lcho_2136 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001791168.1 2338991 D 395495 CDS YP_001791169.1 171058820 6162921 2340039..2341070 1 NC_010524.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_2325 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; polar amino acid ABC transporter inner membrane subunit 2341070 6162921 Lcho_2137 Leptothrix cholodnii SP-6 polar amino acid ABC transporter inner membrane subunit YP_001791169.1 2340039 D 395495 CDS YP_001791170.1 171058821 6162922 2341231..2342331 1 NC_010524.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_2326 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; polar amino acid ABC transporter inner membrane subunit 2342331 6162922 Lcho_2138 Leptothrix cholodnii SP-6 polar amino acid ABC transporter inner membrane subunit YP_001791170.1 2341231 D 395495 CDS YP_001791171.1 171058822 6162923 2342456..2343211 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_2327 ABC transporter related; ABC transporter-like protein 2343211 6162923 Lcho_2139 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001791171.1 2342456 D 395495 CDS YP_001791172.1 171058823 6162924 2343208..2343354 1 NC_010524.1 KEGG: pen:PSEEN0366 hypothetical protein; hypothetical protein 2343354 6162924 Lcho_2140 Leptothrix cholodnii SP-6 hypothetical protein YP_001791172.1 2343208 D 395495 CDS YP_001791173.1 171058824 6163883 2343344..2343703 1 NC_010524.1 KEGG: pen:PSEEN0367 hypothetical protein; hypothetical protein 2343703 6163883 Lcho_2141 Leptothrix cholodnii SP-6 hypothetical protein YP_001791173.1 2343344 D 395495 CDS YP_001791174.1 171058825 6163885 complement(2344119..2345084) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rfr:Rfer_2438 transcriptional regulator, LysR family; LysR family transcriptional regulator 2345084 6163885 Lcho_2143 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001791174.1 2344119 R 395495 CDS YP_001791175.1 171058826 6163886 2345211..2346017 1 NC_010524.1 PFAM: Carboxymuconolactone decarboxylase; Cupin 2 conserved barrel domain protein; KEGG: rfr:Rfer_2441 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 2346017 6163886 Lcho_2144 Leptothrix cholodnii SP-6 carboxymuconolactone decarboxylase YP_001791175.1 2345211 D 395495 CDS YP_001791176.1 171058827 6163887 2346029..2346205 1 NC_010524.1 hypothetical protein 2346205 6163887 Lcho_2145 Leptothrix cholodnii SP-6 hypothetical protein YP_001791176.1 2346029 D 395495 CDS YP_001791177.1 171058828 6163888 2346240..2347457 1 NC_010524.1 PFAM: aldo/keto reductase; KEGG: pde:Pden_3243 aldo/keto reductase; aldo/keto reductase 2347457 6163888 Lcho_2146 Leptothrix cholodnii SP-6 aldo/keto reductase YP_001791177.1 2346240 D 395495 CDS YP_001791178.1 171058829 6163719 complement(2347685..2348692) 1 NC_010524.1 PFAM: sodium/calcium exchanger membrane region; KEGG: rfr:Rfer_1133 sodium/calcium exchanger membrane protein; sodium/calcium exchanger membrane region 2348692 6163719 Lcho_2147 Leptothrix cholodnii SP-6 sodium/calcium exchanger membrane region YP_001791178.1 2347685 R 395495 CDS YP_001791179.1 171058830 6163720 2348815..2350065 1 NC_010524.1 PFAM: protein of unknown function DUF1504; KEGG: pol:Bpro_2221 protein of unknown function DUF1504; hypothetical protein 2350065 6163720 Lcho_2148 Leptothrix cholodnii SP-6 hypothetical protein YP_001791179.1 2348815 D 395495 CDS YP_001791180.1 171058831 6163721 2350189..2350779 1 NC_010524.1 KEGG: rfr:Rfer_2187 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate/ketoisovalerate oxidoreductase subunit gamma 2350779 6163721 Lcho_2149 Leptothrix cholodnii SP-6 pyruvate/ketoisovalerate oxidoreductase subunit gamma YP_001791180.1 2350189 D 395495 CDS YP_001791181.1 171058832 6163722 2350763..2352028 1 NC_010524.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rfr:Rfer_2186 pyruvate flavodoxin/ferredoxin oxidoreductase-like; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 2352028 6163722 Lcho_2150 Leptothrix cholodnii SP-6 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_001791181.1 2350763 D 395495 CDS YP_001791182.1 171058833 6163723 2352365..2353396 1 NC_010524.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: rfr:Rfer_2185 thiamine pyrophosphate enzyme-like TPP-binding; thiamine pyrophosphate-binding domain-containing protein 2353396 6163723 Lcho_2151 Leptothrix cholodnii SP-6 thiamine pyrophosphate-binding domain-containing protein YP_001791182.1 2352365 D 395495 CDS YP_001791183.1 171058834 6163724 2353393..2355108 1 NC_010524.1 unknown function; putative glutamate synthase (NADPH) small subunit 2355108 6163724 Lcho_2152 Leptothrix cholodnii SP-6 putative glutamate synthase (NADPH) small subunit YP_001791183.1 2353393 D 395495 CDS YP_001791184.1 171058835 6161451 2355173..2356387 1 NC_010524.1 PFAM: extracellular solute-binding protein family 1; KEGG: rsq:Rsph17025_1446 ABC-type uncharacterized transport system periplasmic component-like protein; extracellular solute-binding protein 2356387 6161451 Lcho_2153 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001791184.1 2355173 D 395495 CDS YP_001791185.1 171058836 6161452 2356363..2358099 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsh:Rsph17029_1833 ABC transporter, fused inner membrane subunits; binding-protein-dependent transport system inner membrane protein 2358099 6161452 Lcho_2154 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001791185.1 2356363 D 395495 CDS YP_001791186.1 171058837 6161453 2358096..2358740 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsh:Rsph17029_1834 ABC transporter related; ABC transporter-like protein 2358740 6161453 Lcho_2155 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001791186.1 2358096 D 395495 CDS YP_001791187.1 171058838 6161454 2358737..2359912 1 NC_010524.1 PFAM: major facilitator superfamily MFS_1; KEGG: dar:Daro_1135 major facilitator superfamily MFS_1; major facilitator transporter 2359912 6161454 Lcho_2156 Leptothrix cholodnii SP-6 major facilitator transporter YP_001791187.1 2358737 D 395495 CDS YP_001791188.1 171058839 6161455 2359978..2360619 1 NC_010524.1 PFAM: cation efflux protein; KEGG: mpt:Mpe_A1655 hypothetical protein; cation efflux protein 2360619 6161455 Lcho_2157 Leptothrix cholodnii SP-6 cation efflux protein YP_001791188.1 2359978 D 395495 CDS YP_001791189.1 171058840 6161456 2360603..2361055 1 NC_010524.1 PFAM: Disulphide bond formation protein DsbB; KEGG: psa:PST_0576 disulfide bond formation protein; disulfide bond formation protein DsbB 2361055 6161456 Lcho_2158 Leptothrix cholodnii SP-6 disulfide bond formation protein DsbB YP_001791189.1 2360603 D 395495 CDS YP_001791190.1 171058841 6163706 2361052..2361717 1 NC_010524.1 KEGG: rfr:Rfer_0414 DsbA oxidoreductase; DsbA oxidoreductase 2361717 6163706 Lcho_2159 Leptothrix cholodnii SP-6 DsbA oxidoreductase YP_001791190.1 2361052 D 395495 CDS YP_001791191.1 171058842 6163707 complement(2361722..2362219) 1 NC_010524.1 hypothetical protein 2362219 6163707 Lcho_2160 Leptothrix cholodnii SP-6 hypothetical protein YP_001791191.1 2361722 R 395495 CDS YP_001791192.1 171058843 6163708 complement(2362283..2362924) 1 NC_010524.1 PFAM: GTP cyclohydrolase II; KEGG: reu:Reut_B4241 GTP cyclohydrolase II; GTP cyclohydrolase II 2362924 6163708 Lcho_2161 Leptothrix cholodnii SP-6 GTP cyclohydrolase II YP_001791192.1 2362283 R 395495 CDS YP_001791193.1 171058844 6163709 2363124..2364827 1 NC_010524.1 PFAM: protein of unknown function DUF1302; KEGG: gme:Gmet_2248 hypothetical protein; hypothetical protein 2364827 6163709 Lcho_2162 Leptothrix cholodnii SP-6 hypothetical protein YP_001791193.1 2363124 D 395495 CDS YP_001791194.1 171058845 6163710 2364838..2366187 1 NC_010524.1 PFAM: protein of unknown function DUF1329; KEGG: psa:PST_0616 hypothetical protein; hypothetical protein 2366187 6163710 Lcho_2163 Leptothrix cholodnii SP-6 hypothetical protein YP_001791194.1 2364838 D 395495 CDS YP_001791195.1 171058846 6163711 2366218..2367324 1 NC_010524.1 KEGG: psa:PST_0617 glycosyl hydrolase; glycosyl hydrolase 2367324 6163711 Lcho_2164 Leptothrix cholodnii SP-6 glycosyl hydrolase YP_001791195.1 2366218 D 395495 CDS YP_001791196.1 171058847 6163497 2367396..2369822 1 NC_010524.1 KEGG: psa:PST_0618 transporter, putative; transporter 2369822 6163497 Lcho_2165 Leptothrix cholodnii SP-6 transporter YP_001791196.1 2367396 D 395495 CDS YP_001791197.1 171058848 6163498 2369829..2370200 1 NC_010524.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: ppf:Pput_2672 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 2370200 6163498 Lcho_2166 Leptothrix cholodnii SP-6 Rieske (2Fe-2S) domain-containing protein YP_001791197.1 2369829 D 395495 CDS YP_001791198.1 171058849 6163499 2370313..2372349 1 NC_010524.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: gur:Gura_2167 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2372349 6163499 Lcho_2167 Leptothrix cholodnii SP-6 methyl-accepting chemotaxis sensory transducer YP_001791198.1 2370313 D 395495 CDS YP_001791199.1 171058850 6163500 complement(2372379..2373671) 1 NC_010524.1 PFAM: HipA domain protein; KEGG: pol:Bpro_1570 hypothetical protein; hypothetical protein 2373671 6163500 Lcho_2168 Leptothrix cholodnii SP-6 hypothetical protein YP_001791199.1 2372379 R 395495 CDS YP_001791200.1 171058851 6163501 2374432..2374803 1 NC_010524.1 KEGG: ppd:Ppro_3210 hypothetical protein; hypothetical protein 2374803 6163501 Lcho_2169 Leptothrix cholodnii SP-6 hypothetical protein YP_001791200.1 2374432 D 395495 CDS YP_001791201.1 171058852 6163502 complement(2375075..2376169) 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_B4540 conserved hypothetical protein 698; hypothetical protein 2376169 6163502 Lcho_2170 Leptothrix cholodnii SP-6 hypothetical protein YP_001791201.1 2375075 R 395495 CDS YP_001791202.1 171058853 6163150 complement(2376173..2377813) 1 NC_010524.1 PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_5305 acyl-CoA synthetase; AMP-dependent synthetase and ligase 2377813 6163150 Lcho_2171 Leptothrix cholodnii SP-6 AMP-dependent synthetase and ligase YP_001791202.1 2376173 R 395495 CDS YP_001791203.1 171058854 6163151 complement(2377914..2379272) 1 NC_010524.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rme:Rmet_0776 major facilitator superfamily MFS_1; major facilitator transporter 2379272 6163151 Lcho_2172 Leptothrix cholodnii SP-6 major facilitator transporter YP_001791203.1 2377914 R 395495 CDS YP_001791204.1 171058855 6163152 complement(2379287..2380279) 1 NC_010524.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dac:Daci_2009 alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase 2380279 6163152 Lcho_2173 Leptothrix cholodnii SP-6 alcohol dehydrogenase YP_001791204.1 2379287 R 395495 CDS YP_001791205.1 171058856 6163153 complement(2380307..2381365) 1 NC_010524.1 PFAM: protein of unknown function DUF849; KEGG: reh:H16_B2526 hypothetical protein; hypothetical protein 2381365 6163153 Lcho_2174 Leptothrix cholodnii SP-6 hypothetical protein YP_001791205.1 2380307 R 395495 CDS YP_001791206.1 171058857 6163154 complement(2381421..2382341) 1 NC_010524.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: reu:Reut_A2147 taurine dioxygenase; taurine dioxygenase 2382341 6163154 Lcho_2175 Leptothrix cholodnii SP-6 taurine dioxygenase YP_001791206.1 2381421 R 395495 CDS YP_001791207.1 171058858 6163155 complement(2382479..2385145) 1 NC_010524.1 PFAM: regulatory protein LuxR; KEGG: bps:BPSS2291 GerE family regulatory protein; ATP-dependent transcription regulator LuxR 2385145 6163155 Lcho_2176 Leptothrix cholodnii SP-6 ATP-dependent transcription regulator LuxR YP_001791207.1 2382479 R 395495 CDS YP_001791208.1 171058859 6162873 2385326..2386105 1 NC_010524.1 PFAM: SCP-like extracellular; SMART: Allergen V5/Tpx-1 family protein; KEGG: nve:NEMVE_v1g233975 predicted protein Pfam: SCP PROSITE: CRISP_1; hypothetical protein 2386105 6162873 Lcho_2177 Leptothrix cholodnii SP-6 hypothetical protein YP_001791208.1 2385326 D 395495 CDS YP_001791209.1 171058860 6162874 complement(2386289..2386699) 1 NC_010524.1 hypothetical protein 2386699 6162874 Lcho_2178 Leptothrix cholodnii SP-6 hypothetical protein YP_001791209.1 2386289 R 395495 CDS YP_001791210.1 171058861 6162875 complement(2386823..2387155) 1 NC_010524.1 KEGG: ppd:Ppro_3130 hypothetical protein; hypothetical protein 2387155 6162875 Lcho_2179 Leptothrix cholodnii SP-6 hypothetical protein YP_001791210.1 2386823 R 395495 CDS YP_001791211.1 171058862 6162876 complement(2387333..2387467) 1 NC_010524.1 hypothetical protein 2387467 6162876 Lcho_2180 Leptothrix cholodnii SP-6 hypothetical protein YP_001791211.1 2387333 R 395495 CDS YP_001791212.1 171058863 6162877 complement(2387470..2388006) 1 NC_010524.1 hypothetical protein 2388006 6162877 Lcho_2181 Leptothrix cholodnii SP-6 hypothetical protein YP_001791212.1 2387470 R 395495 CDS YP_001791213.1 171058864 6162878 complement(2388003..2388452) 1 NC_010524.1 hypothetical protein 2388452 6162878 Lcho_2182 Leptothrix cholodnii SP-6 hypothetical protein YP_001791213.1 2388003 R 395495 CDS YP_001791214.1 171058865 6162429 complement(2388449..2389138) 1 NC_010524.1 KEGG: jan:Jann_1611 serine/threonine protein kinase; serine/threonine protein kinase 2389138 6162429 Lcho_2183 Leptothrix cholodnii SP-6 serine/threonine protein kinase YP_001791214.1 2388449 R 395495 CDS YP_001791215.1 171058866 6162430 complement(2389172..2389441) 1 NC_010524.1 hypothetical protein 2389441 6162430 Lcho_2184 Leptothrix cholodnii SP-6 hypothetical protein YP_001791215.1 2389172 R 395495 CDS YP_001791216.1 171058867 6162431 complement(2389438..2389770) 1 NC_010524.1 hypothetical protein 2389770 6162431 Lcho_2185 Leptothrix cholodnii SP-6 hypothetical protein YP_001791216.1 2389438 R 395495 CDS YP_001791217.1 171058868 6162432 complement(2389754..2389990) 1 NC_010524.1 hypothetical protein 2389990 6162432 Lcho_2186 Leptothrix cholodnii SP-6 hypothetical protein YP_001791217.1 2389754 R 395495 CDS YP_001791218.1 171058869 6162433 complement(2389993..2390805) 1 NC_010524.1 hypothetical protein 2390805 6162433 Lcho_2187 Leptothrix cholodnii SP-6 hypothetical protein YP_001791218.1 2389993 R 395495 CDS YP_001791219.1 171058870 6162434 complement(2390995..2393196) 1 NC_010524.1 KEGG: reh:H16_B2382 putative helicase; hypothetical protein 2393196 6162434 Lcho_2188 Leptothrix cholodnii SP-6 hypothetical protein YP_001791219.1 2390995 R 395495 CDS YP_001791220.1 171058871 6162352 complement(2393193..2393723) 1 NC_010524.1 hypothetical protein 2393723 6162352 Lcho_2189 Leptothrix cholodnii SP-6 hypothetical protein YP_001791220.1 2393193 R 395495 CDS YP_001791221.1 171058872 6162353 complement(2393725..2393931) 1 NC_010524.1 hypothetical protein 2393931 6162353 Lcho_2190 Leptothrix cholodnii SP-6 hypothetical protein YP_001791221.1 2393725 R 395495 CDS YP_001791222.1 171058873 6162354 complement(2393924..2394136) 1 NC_010524.1 hypothetical protein 2394136 6162354 Lcho_2191 Leptothrix cholodnii SP-6 hypothetical protein YP_001791222.1 2393924 R 395495 CDS YP_001791223.1 171058874 6162355 complement(2394133..2394396) 1 NC_010524.1 hypothetical protein 2394396 6162355 Lcho_2192 Leptothrix cholodnii SP-6 hypothetical protein YP_001791223.1 2394133 R 395495 CDS YP_001791224.1 171058875 6162356 2394670..2394840 1 NC_010524.1 hypothetical protein 2394840 6162356 Lcho_2193 Leptothrix cholodnii SP-6 hypothetical protein YP_001791224.1 2394670 D 395495 CDS YP_001791225.1 171058876 6162357 complement(2395035..2395325) 1 NC_010524.1 hypothetical protein 2395325 6162357 Lcho_2194 Leptothrix cholodnii SP-6 hypothetical protein YP_001791225.1 2395035 R 395495 CDS YP_001791226.1 171058877 6161987 complement(2395322..2395762) 1 NC_010524.1 KEGG: pna:Pnap_4720 hypothetical protein; hypothetical protein 2395762 6161987 Lcho_2195 Leptothrix cholodnii SP-6 hypothetical protein YP_001791226.1 2395322 R 395495 CDS YP_001791227.1 171058878 6161988 complement(2395762..2396160) 1 NC_010524.1 hypothetical protein 2396160 6161988 Lcho_2196 Leptothrix cholodnii SP-6 hypothetical protein YP_001791227.1 2395762 R 395495 CDS YP_001791228.1 171058879 6161989 complement(2396173..2396409) 1 NC_010524.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Prophage CP4-57 regulatory; phage transcriptional regulator AlpA 2396409 6161989 Lcho_2197 Leptothrix cholodnii SP-6 phage transcriptional regulator AlpA YP_001791228.1 2396173 R 395495 CDS YP_001791229.1 171058880 6161990 complement(2396973..2397221) 1 NC_010524.1 hypothetical protein 2397221 6161990 Lcho_2198 Leptothrix cholodnii SP-6 hypothetical protein YP_001791229.1 2396973 R 395495 CDS YP_001791230.1 171058881 6161991 complement(2397218..2397475) 1 NC_010524.1 hypothetical protein 2397475 6161991 Lcho_2199 Leptothrix cholodnii SP-6 hypothetical protein YP_001791230.1 2397218 R 395495 CDS YP_001791231.1 171058882 6161992 complement(2397472..2398719) 1 NC_010524.1 PFAM: integrase family protein; KEGG: vei:Veis_2767 phage integrase family protein; integrase family protein 2398719 6161992 Lcho_2200 Leptothrix cholodnii SP-6 integrase family protein YP_001791231.1 2397472 R 395495 CDS YP_001791232.1 171058883 6160583 2399659..2401062 1 NC_010524.1 KEGG: ppu:PP_3397 hypothetical protein; hypothetical protein 2401062 6160583 Lcho_2201 Leptothrix cholodnii SP-6 hypothetical protein YP_001791232.1 2399659 D 395495 CDS YP_001791233.1 171058884 6160584 2401080..2403605 1 NC_010524.1 PFAM: Fibronectin type III domain protein; KEGG: pen:PSEEN2822 hypothetical protein; fibronectin type III domain-containing protein 2403605 6160584 Lcho_2202 Leptothrix cholodnii SP-6 fibronectin type III domain-containing protein YP_001791233.1 2401080 D 395495 CDS YP_001791234.1 171058885 6160585 2403878..2405167 1 NC_010524.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: mms:mma_1067 cytosine/purine/uracil/thiamine/allantoin permease family protein (NCS1 family); cytosine/purines uracil thiamine allantoin permease 2405167 6160585 Lcho_2203 Leptothrix cholodnii SP-6 cytosine/purines uracil thiamine allantoin permease YP_001791234.1 2403878 D 395495 CDS YP_001791235.1 171058886 6160586 complement(2405233..2406117) 1 NC_010524.1 KEGG: dac:Daci_3294 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 2406117 6160586 Lcho_2204 Leptothrix cholodnii SP-6 phosphomethylpyrimidine kinase YP_001791235.1 2405233 R 395495 CDS YP_001791236.1 171058887 6163307 complement(2406114..2406776) 1 NC_010524.1 KEGG: dvl:Dvul_0900 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 2406776 6163307 Lcho_2205 Leptothrix cholodnii SP-6 thiamine-phosphate pyrophosphorylase YP_001791236.1 2406114 R 395495 CDS YP_001791237.1 171058888 6163308 complement(2406769..2407656) 1 NC_010524.1 PFAM: hydroxyethylthiazole kinase; KEGG: rfr:Rfer_2472 hydroxyethylthiazole kinase; hydroxyethylthiazole kinase 2407656 6163308 Lcho_2206 Leptothrix cholodnii SP-6 hydroxyethylthiazole kinase YP_001791237.1 2406769 R 395495 CDS YP_001791238.1 171058889 6163309 complement(2407704..2409155) 1 NC_010524.1 PFAM: carbohydrate kinase FGGY; KEGG: vei:Veis_2124 carbohydrate kinase, FGGY; carbohydrate kinase FGGY 2409155 6163309 Lcho_2207 Leptothrix cholodnii SP-6 carbohydrate kinase FGGY YP_001791238.1 2407704 R 395495 CDS YP_001791239.1 171058890 6163310 complement(2409164..2409484) 1 NC_010524.1 TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; KEGG: vei:Veis_2123 protein of unknown function DUF718; L-rhamnose 1-epimerase 2409484 6163310 Lcho_2208 Leptothrix cholodnii SP-6 L-rhamnose 1-epimerase YP_001791239.1 2409164 R 395495 CDS YP_001791240.1 171058891 6163311 complement(2409504..2410487) 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_2122 inner-membrane translocator; monosaccharide-transporting ATPase 2410487 6163311 Lcho_2209 Leptothrix cholodnii SP-6 monosaccharide-transporting ATPase YP_001791240.1 2409504 R 395495 CDS YP_001791241.1 171058892 6163312 complement(2410484..2411515) 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_2121 inner-membrane translocator; monosaccharide-transporting ATPase 2411515 6163312 Lcho_2210 Leptothrix cholodnii SP-6 monosaccharide-transporting ATPase YP_001791241.1 2410484 R 395495 CDS YP_001791242.1 171058893 6160976 complement(2411512..2413119) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_2120 ABC transporter related; ABC transporter-like protein 2413119 6160976 Lcho_2211 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001791242.1 2411512 R 395495 CDS YP_001791243.1 171058894 6160977 complement(2413143..2414135) 1 NC_010524.1 TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_2119 rhamnose ABC transporter, periplasmic rhamnose-binding protein; rhamnose ABC transporter periplasmic rhamnose-binding protein 2414135 6160977 Lcho_2212 Leptothrix cholodnii SP-6 rhamnose ABC transporter periplasmic rhamnose-binding protein YP_001791243.1 2413143 R 395495 CDS YP_001791244.1 171058895 6160978 complement(2414221..2415510) 1 NC_010524.1 TIGRFAM: L-rhamnose catabolism isomerase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: vei:Veis_2116 L-rhamnose catabolism isomerase; L-rhamnose catabolism isomerase 2415510 6160978 Lcho_2213 Leptothrix cholodnii SP-6 L-rhamnose catabolism isomerase YP_001791244.1 2414221 R 395495 CDS YP_001791245.1 171058896 6160979 complement(2415537..2417660) 1 NC_010524.1 TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: class II aldolase/adducin family protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: vei:Veis_2115 rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; short chain dehydrogenase 2417660 6160979 Lcho_2214 Leptothrix cholodnii SP-6 short chain dehydrogenase YP_001791245.1 2415537 R 395495 CDS YP_001791246.1 171058897 6160980 2417835..2418779 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_2114 transcriptional regulator, LysR family; LysR family transcriptional regulator 2418779 6160980 Lcho_2215 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001791246.1 2417835 D 395495 CDS YP_001791247.1 171058898 6160981 complement(2418828..2420123) 1 NC_010524.1 PFAM: peptidase M16 domain protein; KEGG: dac:Daci_3015 peptidase M16 domain protein; peptidase M16 domain-containing protein 2420123 6160981 Lcho_2216 Leptothrix cholodnii SP-6 peptidase M16 domain-containing protein YP_001791247.1 2418828 R 395495 CDS YP_001791248.1 171058899 6160982 2420314..2421489 1 NC_010524.1 PFAM: protein of unknown function DUF344; KEGG: reh:H16_A1212 hypothetical protein; hypothetical protein 2421489 6160982 Lcho_2217 Leptothrix cholodnii SP-6 hypothetical protein YP_001791248.1 2420314 D 395495 CDS YP_001791249.1 171058900 6160665 2421525..2421809 1 NC_010524.1 KEGG: rle:pRL70166 hypothetical protein; hypothetical protein 2421809 6160665 Lcho_2218 Leptothrix cholodnii SP-6 hypothetical protein YP_001791249.1 2421525 D 395495 CDS YP_001791250.1 171058901 6160666 2421806..2422177 1 NC_010524.1 KEGG: gsu:GSU0551 hypothetical protein; hypothetical protein 2422177 6160666 Lcho_2219 Leptothrix cholodnii SP-6 hypothetical protein YP_001791250.1 2421806 D 395495 CDS YP_001791251.1 171058902 6160668 complement(2422705..2423655) 1 NC_010524.1 PFAM: PfkB domain protein; KEGG: pfl:PFL_3076 fructokinase; ribokinase-like domain-containing protein 2423655 6160668 Lcho_2220 Leptothrix cholodnii SP-6 ribokinase-like domain-containing protein YP_001791251.1 2422705 R 395495 CDS YP_001791252.1 171058903 6160669 2423903..2424901 1 NC_010524.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pna:Pnap_2602 periplasmic binding protein/LacI transcriptional regulator; periplasmic-binding protein/LacI transcriptional regulator 2424901 6160669 Lcho_2221 Leptothrix cholodnii SP-6 periplasmic-binding protein/LacI transcriptional regulator YP_001791252.1 2423903 D 395495 CDS YP_001791253.1 171058904 6160632 2425094..2426053 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: pna:Pnap_2604 inner-membrane translocator; monosaccharide-transporting ATPase 2426053 6160632 Lcho_2222 Leptothrix cholodnii SP-6 monosaccharide-transporting ATPase YP_001791253.1 2425094 D 395495 CDS YP_001791254.1 171058905 6160633 2426053..2426844 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_2605 ABC transporter related; ABC transporter-like protein 2426844 6160633 Lcho_2223 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001791254.1 2426053 D 395495 CDS YP_001791255.1 171058906 6160634 2426928..2427398 1 NC_010524.1 PFAM: RbsD or FucU transport; KEGG: pol:Bpro_3206 RbsD or FucU transport; transport protein RbsD/FucU 2427398 6160634 Lcho_2224 Leptothrix cholodnii SP-6 transport protein RbsD/FucU YP_001791255.1 2426928 D 395495 CDS YP_001791256.1 171058907 6160635 2427438..2428706 1 NC_010524.1 PFAM: ROK family protein; KEGG: pol:Bpro_3207 hypothetical protein; ROK family protein 2428706 6160635 Lcho_2225 Leptothrix cholodnii SP-6 ROK family protein YP_001791256.1 2427438 D 395495 CDS YP_001791257.1 171058908 6160636 complement(2428734..2432789) 1 NC_010524.1 KEGG: mpt:Mpe_A1374 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases; ATP-dependent helicase HrpA 2432789 6160636 Lcho_2226 Leptothrix cholodnii SP-6 ATP-dependent helicase HrpA YP_001791257.1 2428734 R 395495 CDS YP_001791258.1 171058909 6160637 complement(2432833..2433216) 1 NC_010524.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ppr:PBPRB1021 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 2433216 6160637 Lcho_2227 Leptothrix cholodnii SP-6 glyoxalase/bleomycin resistance protein/dioxygenase YP_001791258.1 2432833 R 395495 CDS YP_001791259.1 171058910 6160638 2433337..2434677 1 NC_010524.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 2434677 6160638 Lcho_2228 Leptothrix cholodnii SP-6 N-acetylglutamate synthase YP_001791259.1 2433337 D 395495 CDS YP_001791260.1 171058911 6163673 2434738..2435010 1 NC_010524.1 PFAM: Fe(II) trafficking protein YggX; KEGG: mpt:Mpe_A1372 hypothetical protein; hypothetical protein 2435010 6163673 Lcho_2229 Leptothrix cholodnii SP-6 hypothetical protein YP_001791260.1 2434738 D 395495 CDS YP_001791261.1 171058912 6163674 complement(2435163..2435615) 1 NC_010524.1 KEGG: bvi:Bcep1808_7770 hypothetical protein; hypothetical protein 2435615 6163674 Lcho_2230 Leptothrix cholodnii SP-6 hypothetical protein YP_001791261.1 2435163 R 395495 CDS YP_001791262.1 171058913 6163675 complement(2435618..2435791) 1 NC_010524.1 hypothetical protein 2435791 6163675 Lcho_2231 Leptothrix cholodnii SP-6 hypothetical protein YP_001791262.1 2435618 R 395495 CDS YP_001791263.1 171058914 6163676 complement(2435945..2441692) 1 NC_010524.1 KEGG: bwe:BcerKBAB4_5440 hypothetical protein; Phage-like protein tail component-like protein 2441692 6163676 Lcho_2232 Leptothrix cholodnii SP-6 Phage-like protein tail component-like protein YP_001791263.1 2435945 R 395495 CDS YP_001791264.1 171058915 6163677 complement(2441689..2442258) 1 NC_010524.1 KEGG: aba:Acid345_3158 hypothetical protein; hypothetical protein 2442258 6163677 Lcho_2233 Leptothrix cholodnii SP-6 hypothetical protein YP_001791264.1 2441689 R 395495 CDS YP_001791265.1 171058916 6163678 complement(2442255..2442881) 1 NC_010524.1 KEGG: pst:PSPTO_4044 hypothetical protein; hypothetical protein 2442881 6163678 Lcho_2234 Leptothrix cholodnii SP-6 hypothetical protein YP_001791265.1 2442255 R 395495 CDS YP_001791266.1 171058917 6163679 complement(2442889..2446230) 1 NC_010524.1 PFAM: Prophage tail length tape measure; KEGG: rso:RSc1690 probable phage HK97 tail length TAPE measure-related protein; prophage tail length tape measure 2446230 6163679 Lcho_2235 Leptothrix cholodnii SP-6 prophage tail length tape measure YP_001791266.1 2442889 R 395495 CDS YP_001791267.1 171058918 6162519 complement(2446246..2446614) 1 NC_010524.1 PFAM: Protein of unknown function DUF1799 phage-related; KEGG: aav:Aave_1781 hypothetical protein; hypothetical protein 2446614 6162519 Lcho_2236 Leptothrix cholodnii SP-6 hypothetical protein YP_001791267.1 2446246 R 395495 CDS YP_001791268.1 171058919 6162520 complement(2446632..2446982) 1 NC_010524.1 hypothetical protein 2446982 6162520 Lcho_2237 Leptothrix cholodnii SP-6 hypothetical protein YP_001791268.1 2446632 R 395495 CDS YP_001791269.1 171058920 6162521 complement(2446993..2447958) 1 NC_010524.1 KEGG: rsq:Rsph17025_2092 hypothetical protein; hypothetical protein 2447958 6162521 Lcho_2238 Leptothrix cholodnii SP-6 hypothetical protein YP_001791269.1 2446993 R 395495 CDS YP_001791270.1 171058921 6162522 complement(2447997..2448215) 1 NC_010524.1 hypothetical protein 2448215 6162522 Lcho_2239 Leptothrix cholodnii SP-6 hypothetical protein YP_001791270.1 2447997 R 395495 CDS YP_001791271.1 171058922 6162523 complement(2448249..2448710) 1 NC_010524.1 hypothetical protein 2448710 6162523 Lcho_2240 Leptothrix cholodnii SP-6 hypothetical protein YP_001791271.1 2448249 R 395495 CDS YP_001791272.1 171058923 6162524 complement(2448707..2449120) 1 NC_010524.1 PFAM: protein of unknown function DUF1320; KEGG: pol:Bpro_3744 protein of unknown function DUF1320; hypothetical protein 2449120 6162524 Lcho_2241 Leptothrix cholodnii SP-6 hypothetical protein YP_001791272.1 2448707 R 395495 CDS YP_001791273.1 171058924 6162525 complement(2449130..2449348) 1 NC_010524.1 hypothetical protein 2449348 6162525 Lcho_2242 Leptothrix cholodnii SP-6 hypothetical protein YP_001791273.1 2449130 R 395495 CDS YP_001791274.1 171058925 6163218 complement(2449476..2450357) 1 NC_010524.1 KEGG: mag:amb1768 Mu-like prophage major head subunit gpT; Mu-like prophage major head subunit gpT 2450357 6163218 Lcho_2243 Leptothrix cholodnii SP-6 Mu-like prophage major head subunit gpT YP_001791274.1 2449476 R 395495 CDS YP_001791275.1 171058926 6163219 complement(2450399..2450812) 1 NC_010524.1 KEGG: rsq:Rsph17025_2097 hypothetical protein; hypothetical protein 2450812 6163219 Lcho_2244 Leptothrix cholodnii SP-6 hypothetical protein YP_001791275.1 2450399 R 395495 CDS YP_001791276.1 171058927 6163220 complement(2450866..2451987) 1 NC_010524.1 KEGG: bvi:Bcep1808_1303 hypothetical protein; hypothetical protein 2451987 6163220 Lcho_2245 Leptothrix cholodnii SP-6 hypothetical protein YP_001791276.1 2450866 R 395495 CDS YP_001791277.1 171058928 6163221 complement(2452054..2452632) 1 NC_010524.1 hypothetical protein 2452632 6163221 Lcho_2246 Leptothrix cholodnii SP-6 hypothetical protein YP_001791277.1 2452054 R 395495 CDS YP_001791278.1 171058929 6163222 complement(2452638..2453393) 1 NC_010524.1 PFAM: putative head morphogenesis protein SPP1 gp7; KEGG: pol:Bpro_3784 phage putative head morphogenesis protein, SPP1 gp7; putative head morphogenesis protein SPP1 gp7 2453393 6163222 Lcho_2247 Leptothrix cholodnii SP-6 putative head morphogenesis protein SPP1 gp7 YP_001791278.1 2452638 R 395495 CDS YP_001791279.1 171058930 6163223 complement(2453396..2455150) 1 NC_010524.1 PFAM: protein of unknown function DUF935; KEGG: bvi:Bcep1808_1306 protein of unknown function DUF935; hypothetical protein 2455150 6163223 Lcho_2248 Leptothrix cholodnii SP-6 hypothetical protein YP_001791279.1 2453396 R 395495 CDS YP_001791280.1 171058931 6163224 complement(2455308..2456990) 1 NC_010524.1 KEGG: pol:Bpro_3782 hypothetical protein; hypothetical protein 2456990 6163224 Lcho_2249 Leptothrix cholodnii SP-6 hypothetical protein YP_001791280.1 2455308 R 395495 CDS YP_001791281.1 171058932 6163251 complement(2456987..2457208) 1 NC_010524.1 hypothetical protein 2457208 6163251 Lcho_2250 Leptothrix cholodnii SP-6 hypothetical protein YP_001791281.1 2456987 R 395495 CDS YP_001791282.1 171058933 6163252 complement(2457205..2457777) 1 NC_010524.1 KEGG: stt:t1374 hypothetical protein; hypothetical protein 2457777 6163252 Lcho_2251 Leptothrix cholodnii SP-6 hypothetical protein YP_001791282.1 2457205 R 395495 CDS YP_001791283.1 171058934 6163253 complement(2457781..2458086) 1 NC_010524.1 KEGG: bbr:BB3634 hypothetical protein; hypothetical protein 2458086 6163253 Lcho_2252 Leptothrix cholodnii SP-6 hypothetical protein YP_001791283.1 2457781 R 395495 CDS YP_001791284.1 171058935 6163254 complement(2458083..2458436) 1 NC_010524.1 KEGG: bbr:BB3635 phage-related hypothetical protein; hypothetical protein 2458436 6163254 Lcho_2253 Leptothrix cholodnii SP-6 hypothetical protein YP_001791284.1 2458083 R 395495 CDS YP_001791285.1 171058936 6163255 complement(2458494..2458835) 1 NC_010524.1 hypothetical protein 2458835 6163255 Lcho_2254 Leptothrix cholodnii SP-6 hypothetical protein YP_001791285.1 2458494 R 395495 CDS YP_001791286.1 171058937 6163256 complement(2458858..2459877) 1 NC_010524.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: par:Psyc_0447 possible RNA-directed DNA polymerase (reverse transcriptase); RNA-directed DNA polymerase 2459877 6163256 Lcho_2255 Leptothrix cholodnii SP-6 RNA-directed DNA polymerase YP_001791286.1 2458858 R 395495 CDS YP_001791287.1 171058938 6163257 complement(2460143..2460568) 1 NC_010524.1 KEGG: par:Psyc_0448 hypothetical protein; hypothetical protein 2460568 6163257 Lcho_2256 Leptothrix cholodnii SP-6 hypothetical protein YP_001791287.1 2460143 R 395495 CDS YP_001791288.1 171058939 6161245 complement(2460605..2462149) 1 NC_010524.1 KEGG: par:Psyc_0449 hypothetical protein; hypothetical protein 2462149 6161245 Lcho_2257 Leptothrix cholodnii SP-6 hypothetical protein YP_001791288.1 2460605 R 395495 CDS YP_001791289.1 171058940 6161246 complement(2462149..2462454) 1 NC_010524.1 hypothetical protein 2462454 6161246 Lcho_2258 Leptothrix cholodnii SP-6 hypothetical protein YP_001791289.1 2462149 R 395495 CDS YP_001791290.1 171058941 6161247 complement(2462478..2462690) 1 NC_010524.1 hypothetical protein 2462690 6161247 Lcho_2259 Leptothrix cholodnii SP-6 hypothetical protein YP_001791290.1 2462478 R 395495 CDS YP_001791291.1 171058942 6161248 complement(2462687..2463175) 1 NC_010524.1 PFAM: Peptidase M15A; KEGG: bte:BTH_II1066 hypothetical protein; peptidase M15A 2463175 6161248 Lcho_2260 Leptothrix cholodnii SP-6 peptidase M15A YP_001791291.1 2462687 R 395495 CDS YP_001791292.1 171058943 6161249 complement(2463600..2464190) 1 NC_010524.1 KEGG: mms:mma_3471 hypothetical protein; hypothetical protein 2464190 6161249 Lcho_2261 Leptothrix cholodnii SP-6 hypothetical protein YP_001791292.1 2463600 R 395495 CDS YP_001791293.1 171058944 6161250 complement(2464198..2464989) 1 NC_010524.1 KEGG: sat:SYN_02332 hypothetical cytosolic protein; hypothetical protein 2464989 6161250 Lcho_2262 Leptothrix cholodnii SP-6 hypothetical protein YP_001791293.1 2464198 R 395495 CDS YP_001791294.1 171058945 6161251 complement(2465090..2465338) 1 NC_010524.1 hypothetical protein 2465338 6161251 Lcho_2263 Leptothrix cholodnii SP-6 hypothetical protein YP_001791294.1 2465090 R 395495 CDS YP_001791295.1 171058946 6163781 complement(2465399..2465725) 1 NC_010524.1 hypothetical protein 2465725 6163781 Lcho_2264 Leptothrix cholodnii SP-6 hypothetical protein YP_001791295.1 2465399 R 395495 CDS YP_001791296.1 171058947 6163782 complement(2465781..2466224) 1 NC_010524.1 KEGG: aav:Aave_2905 putative transcriptional regulator, XRE family; hypothetical protein 2466224 6163782 Lcho_2265 Leptothrix cholodnii SP-6 hypothetical protein YP_001791296.1 2465781 R 395495 CDS YP_001791297.1 171058948 6163783 2466681..2467154 1 NC_010524.1 KEGG: cvi:CV_2151 hypothetical protein; hypothetical protein 2467154 6163783 Lcho_2266 Leptothrix cholodnii SP-6 hypothetical protein YP_001791297.1 2466681 D 395495 CDS YP_001791298.1 171058949 6163784 2467211..2467702 1 NC_010524.1 hypothetical protein 2467702 6163784 Lcho_2267 Leptothrix cholodnii SP-6 hypothetical protein YP_001791298.1 2467211 D 395495 CDS YP_001791299.1 171058950 6163785 2467741..2468115 1 NC_010524.1 hypothetical protein 2468115 6163785 Lcho_2268 Leptothrix cholodnii SP-6 hypothetical protein YP_001791299.1 2467741 D 395495 CDS YP_001791300.1 171058951 6163786 2468115..2468381 1 NC_010524.1 hypothetical protein 2468381 6163786 Lcho_2269 Leptothrix cholodnii SP-6 hypothetical protein YP_001791300.1 2468115 D 395495 CDS YP_001791301.1 171058952 6163787 2468378..2468683 1 NC_010524.1 PFAM: regulatory protein IclR; KEGG: mfa:Mfla_2714 hypothetical protein; IclR family transcriptional regulator 2468683 6163787 Lcho_2270 Leptothrix cholodnii SP-6 IclR family transcriptional regulator YP_001791301.1 2468378 D 395495 CDS YP_001791302.1 171058953 6164074 2468683..2468958 1 NC_010524.1 hypothetical protein 2468958 6164074 Lcho_2271 Leptothrix cholodnii SP-6 hypothetical protein YP_001791302.1 2468683 D 395495 CDS YP_001791303.1 171058954 6164075 2468955..2469971 1 NC_010524.1 KEGG: hdu:HD1532 hypothetical protein; hypothetical protein 2469971 6164075 Lcho_2272 Leptothrix cholodnii SP-6 hypothetical protein YP_001791303.1 2468955 D 395495 CDS YP_001791304.1 171058955 6164076 2470002..2471795 1 NC_010524.1 KEGG: bbr:BB3647 hypothetical protein; hypothetical protein 2471795 6164076 Lcho_2273 Leptothrix cholodnii SP-6 hypothetical protein YP_001791304.1 2470002 D 395495 CDS YP_001791305.1 171058956 6164077 2471838..2473136 1 NC_010524.1 KEGG: sgl:SG0822 hypothetical protein; hypothetical protein 2473136 6164077 Lcho_2274 Leptothrix cholodnii SP-6 hypothetical protein YP_001791305.1 2471838 D 395495 CDS YP_001791306.1 171058957 6164078 2473166..2473498 1 NC_010524.1 hypothetical protein 2473498 6164078 Lcho_2275 Leptothrix cholodnii SP-6 hypothetical protein YP_001791306.1 2473166 D 395495 CDS YP_001791307.1 171058958 6164079 2473498..2473827 1 NC_010524.1 hypothetical protein 2473827 6164079 Lcho_2276 Leptothrix cholodnii SP-6 hypothetical protein YP_001791307.1 2473498 D 395495 CDS YP_001791308.1 171058959 6164080 2473818..2474453 1 NC_010524.1 KEGG: mfa:Mfla_2720 hypothetical protein; hypothetical protein 2474453 6164080 Lcho_2277 Leptothrix cholodnii SP-6 hypothetical protein YP_001791308.1 2473818 D 395495 CDS YP_001791309.1 171058960 6163136 2474450..2474809 1 NC_010524.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: pol:Bpro_3758 hypothetical protein; helix-turn-helix type 11 domain-containing protein 2474809 6163136 Lcho_2278 Leptothrix cholodnii SP-6 helix-turn-helix type 11 domain-containing protein YP_001791309.1 2474450 D 395495 CDS YP_001791310.1 171058961 6163137 2474848..2475033 1 NC_010524.1 KEGG: bvi:Bcep1808_1319 hypothetical protein; hypothetical protein 2475033 6163137 Lcho_2279 Leptothrix cholodnii SP-6 hypothetical protein YP_001791310.1 2474848 D 395495 CDS YP_001791311.1 171058962 6163138 2475079..2475378 1 NC_010524.1 PFAM: transposase IS3/IS911 family protein; KEGG: pol:Bpro_4705 hypothetical protein; transposase IS3/IS911 family protein 2475378 6163138 Lcho_2280 Leptothrix cholodnii SP-6 transposase IS3/IS911 family protein YP_001791311.1 2475079 D 395495 CDS YP_001791312.1 171058963 6163139 2475375..2476262 1 NC_010524.1 PFAM: Integrase catalytic region; KEGG: pol:Bpro_4706 integrase, catalytic region; integrase catalytic subunit 2476262 6163139 Lcho_2281 Leptothrix cholodnii SP-6 integrase catalytic subunit YP_001791312.1 2475375 D 395495 CDS YP_001791313.1 171058964 6163140 2476272..2476727 1 NC_010524.1 KEGG: mfa:Mfla_2721 hypothetical protein; hypothetical protein 2476727 6163140 Lcho_2282 Leptothrix cholodnii SP-6 hypothetical protein YP_001791313.1 2476272 D 395495 CDS YP_001791314.1 171058965 6163141 2476736..2476993 1 NC_010524.1 hypothetical protein 2476993 6163141 Lcho_2283 Leptothrix cholodnii SP-6 hypothetical protein YP_001791314.1 2476736 D 395495 CDS YP_001791315.1 171058966 6163142 2477202..2477678 1 NC_010524.1 KEGG: eca:ECA3696 putative phage regluatory protein; putative phage regluatory protein 2477678 6163142 Lcho_2284 Leptothrix cholodnii SP-6 putative phage regluatory protein YP_001791315.1 2477202 D 395495 CDS YP_001791316.1 171058967 6161973 2477675..2478037 1 NC_010524.1 PFAM: Mor transcription activator domain protein; KEGG: cvi:CV_2165 probable bacteriophage transcriptional regulator; Mor transcription activator domain-containing protein 2478037 6161973 Lcho_2285 Leptothrix cholodnii SP-6 Mor transcription activator domain-containing protein YP_001791316.1 2477675 D 395495 CDS YP_001791317.1 171058968 6161974 2478200..2478403 1 NC_010524.1 KEGG: shm:Shewmr7_0731 hypothetical protein; hypothetical protein 2478403 6161974 Lcho_2286 Leptothrix cholodnii SP-6 hypothetical protein YP_001791317.1 2478200 D 395495 CDS YP_001791318.1 171058969 6161975 2478548..2478748 1 NC_010524.1 KEGG: son:SO_2678 hypothetical protein; hypothetical protein 2478748 6161975 Lcho_2287 Leptothrix cholodnii SP-6 hypothetical protein YP_001791318.1 2478548 D 395495 CDS YP_001791319.1 171058970 6161976 2478751..2478960 1 NC_010524.1 hypothetical protein 2478960 6161976 Lcho_2288 Leptothrix cholodnii SP-6 hypothetical protein YP_001791319.1 2478751 D 395495 CDS YP_001791320.1 171058971 6161977 2479258..2480313 1 NC_010524.1 PFAM: extracellular solute-binding protein family 1; KEGG: mpt:Mpe_A1371 putative iron binding protein component of ABC iron transporter; extracellular solute-binding protein 2480313 6161977 Lcho_2289 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001791320.1 2479258 D 395495 CDS YP_001791321.1 171058972 6161978 2480395..2480733 1 NC_010524.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: mpt:Mpe_A1370 putative HNS-like transcription regulator protein; histone family protein nucleoid-structuring protein H-NS 2480733 6161978 Lcho_2290 Leptothrix cholodnii SP-6 histone family protein nucleoid-structuring protein H-NS YP_001791321.1 2480395 D 395495 CDS YP_001791322.1 171058973 6161979 2480988..2481716 1 NC_010524.1 PFAM: NLP/P60 protein; KEGG: mpt:Mpe_A2519 cell wall-associated hydrolase-like protein; NLP/P60 protein 2481716 6161979 Lcho_2291 Leptothrix cholodnii SP-6 NLP/P60 protein YP_001791322.1 2480988 D 395495 CDS YP_001791323.1 171058974 6160857 2481783..2482928 1 NC_010524.1 KEGG: pna:Pnap_1689 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 2482928 6160857 Lcho_2292 Leptothrix cholodnii SP-6 molybdenum cofactor biosynthesis protein A YP_001791323.1 2481783 D 395495 CDS YP_001791324.1 171058975 6160858 complement(2482930..2483427) 1 NC_010524.1 KEGG: mpt:Mpe_A1571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2483427 6160858 Lcho_2293 Leptothrix cholodnii SP-6 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_001791324.1 2482930 R 395495 CDS YP_001791325.1 171058976 6160859 complement(2483446..2484573) 1 NC_010524.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: eba:ebA1639 predicted nucleoside-diphosphate-sugar epimerase; NAD-dependent epimerase/dehydratase 2484573 6160859 Lcho_2294 Leptothrix cholodnii SP-6 NAD-dependent epimerase/dehydratase YP_001791325.1 2483446 R 395495 CDS YP_001791326.1 171058977 6160860 complement(2485037..2485738) 1 NC_010524.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: mpt:Mpe_A1570 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2485738 6160860 Lcho_2295 Leptothrix cholodnii SP-6 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_001791326.1 2485037 R 395495 CDS YP_001791327.1 171058978 6160861 complement(2485769..2486953) 1 NC_010524.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: syn:sll1555 two-component hybrid histidine kinase; response regulator receiver sensor signal transduction histidine kinase 2486953 6160861 Lcho_2296 Leptothrix cholodnii SP-6 response regulator receiver sensor signal transduction histidine kinase YP_001791327.1 2485769 R 395495 CDS YP_001791328.1 171058979 6160862 complement(2486950..2487708) 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gvi:glr3562 two-component sensor histidine kinase; histidine kinase 2487708 6160862 Lcho_2297 Leptothrix cholodnii SP-6 histidine kinase YP_001791328.1 2486950 R 395495 CDS YP_001791329.1 171058980 6160863 2488475..2493427 1 NC_010524.1 PFAM: Hemolysin-type calcium-binding region; Animal haem peroxidase; KEGG: ppu:PP_2561 secreted hemolysin-type calcium-binding bacteriocin, putative; heme peroxidase 2493427 6160863 Lcho_2298 Leptothrix cholodnii SP-6 heme peroxidase YP_001791329.1 2488475 D 395495 CDS YP_001791330.1 171058981 6163551 2493495..2495039 1 NC_010524.1 PFAM: outer membrane efflux protein; KEGG: bam:Bamb_6370 type I secretion outer membrane protein, TolC family; outer membrane efflux protein 2495039 6163551 Lcho_2299 Leptothrix cholodnii SP-6 outer membrane efflux protein YP_001791330.1 2493495 D 395495 CDS YP_001791331.1 171058982 6163552 2495081..2497300 1 NC_010524.1 KEGG: reh:H16_B0690 ABC-type RTX toxin transporter, ATPase and permease components: Prot1E family; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; type I secretion system ATPase 2497300 6163552 Lcho_2300 Leptothrix cholodnii SP-6 type I secretion system ATPase YP_001791331.1 2495081 D 395495 CDS YP_001791332.1 171058983 6163553 2497300..2498706 1 NC_010524.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: dvl:Dvul_1976 type I secretion membrane fusion protein, HlyD family; HlyD family type I secretion membrane fusion protein 2498706 6163553 Lcho_2301 Leptothrix cholodnii SP-6 HlyD family type I secretion membrane fusion protein YP_001791332.1 2497300 D 395495 CDS YP_001791333.1 171058984 6163554 complement(2498734..2500035) 1 NC_010524.1 KEGG: dac:Daci_5392 hypothetical protein; hypothetical protein 2500035 6163554 Lcho_2302 Leptothrix cholodnii SP-6 hypothetical protein YP_001791333.1 2498734 R 395495 CDS YP_001791334.1 171058985 6163555 complement(2500114..2501724) 1 NC_010524.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: aav:Aave_4649 protein of unknown function DUF894, DitE; hypothetical protein 2501724 6163555 Lcho_2303 Leptothrix cholodnii SP-6 hypothetical protein YP_001791334.1 2500114 R 395495 CDS YP_001791335.1 171058986 6163556 complement(2501825..2503339) 1 NC_010524.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: mpt:Mpe_A3056 putative transmembrane protein; hypothetical protein 2503339 6163556 Lcho_2304 Leptothrix cholodnii SP-6 hypothetical protein YP_001791335.1 2501825 R 395495 CDS YP_001791336.1 171058987 6163557 complement(2503350..2503814) 1 NC_010524.1 PFAM: protein of unknown function DUF1468; KEGG: mpt:Mpe_A3057 hypothetical protein; hypothetical protein 2503814 6163557 Lcho_2305 Leptothrix cholodnii SP-6 hypothetical protein YP_001791336.1 2503350 R 395495 CDS YP_001791337.1 171058988 6162158 complement(2504182..2505270) 1 NC_010524.1 PFAM: Integrase catalytic region; KEGG: bpt:Bpet3733 putative transposase; integrase catalytic subunit 2505270 6162158 Lcho_2306 Leptothrix cholodnii SP-6 integrase catalytic subunit YP_001791337.1 2504182 R 395495 CDS YP_001791338.1 171058989 6162159 complement(2505267..2505704) 1 NC_010524.1 KEGG: aav:Aave_4358 transposition helper protein; transposition helper protein 2505704 6162159 Lcho_2307 Leptothrix cholodnii SP-6 transposition helper protein YP_001791338.1 2505267 R 395495 CDS YP_001791339.1 171058990 6162160 2505723..2507636 1 NC_010524.1 PFAM: protein of unknown function DUF637 hemagglutinin putative; KEGG: nma:NMA0690 hypothetical protein; hypothetical protein 2507636 6162160 Lcho_2308 Leptothrix cholodnii SP-6 hypothetical protein YP_001791339.1 2505723 D 395495 CDS YP_001791340.1 171058991 6162162 complement(2508681..2510528) 1 NC_010524.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: mpt:Mpe_A3058 general secretory pathway related protein; type II secretion system protein E 2510528 6162162 Lcho_2310 Leptothrix cholodnii SP-6 type II secretion system protein E YP_001791340.1 2508681 R 395495 CDS YP_001791341.1 171058992 6162163 complement(2510550..2511473) 1 NC_010524.1 KEGG: mpt:Mpe_A3059 spermidine synthase-like protein; spermidine synthase-like protein 2511473 6162163 Lcho_2311 Leptothrix cholodnii SP-6 spermidine synthase-like protein YP_001791341.1 2510550 R 395495 CDS YP_001791342.1 171058993 6162164 complement(2511470..2511997) 1 NC_010524.1 KEGG: rfr:Rfer_3216 hypothetical protein; hypothetical protein 2511997 6162164 Lcho_2312 Leptothrix cholodnii SP-6 hypothetical protein YP_001791342.1 2511470 R 395495 CDS YP_001791343.1 171058994 6161934 complement(2511994..2512842) 1 NC_010524.1 PFAM: TatD-related deoxyribonuclease; KEGG: vei:Veis_4583 TatD-related deoxyribonuclease; TatD-like deoxyribonuclease 2512842 6161934 Lcho_2313 Leptothrix cholodnii SP-6 TatD-like deoxyribonuclease YP_001791343.1 2511994 R 395495 CDS YP_001791344.1 171058995 6161935 2513110..2513991 1 NC_010524.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: aav:Aave_1064 peptidase S1 and S6, chymotrypsin/Hap; peptidase S1 and S6 chymotrypsin/Hap 2513991 6161935 Lcho_2314 Leptothrix cholodnii SP-6 peptidase S1 and S6 chymotrypsin/Hap YP_001791344.1 2513110 D 395495 CDS YP_001791345.1 171058996 6161936 2514014..2515051 1 NC_010524.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: pol:Bpro_3891 ATPase associated with various cellular activities, AAA_3; ATPase 2515051 6161936 Lcho_2315 Leptothrix cholodnii SP-6 ATPase YP_001791345.1 2514014 D 395495 CDS YP_001791346.1 171058997 6161937 2515117..2516373 1 NC_010524.1 PFAM: protein of unknown function DUF58; KEGG: pol:Bpro_3892 protein of unknown function DUF58; hypothetical protein 2516373 6161937 Lcho_2316 Leptothrix cholodnii SP-6 hypothetical protein YP_001791346.1 2515117 D 395495 CDS YP_001791347.1 171058998 6161938 2516370..2517422 1 NC_010524.1 PFAM: von Willebrand factor type A; KEGG: pol:Bpro_3893 von Willebrand factor, type A; von Willebrand factor type A 2517422 6161938 Lcho_2317 Leptothrix cholodnii SP-6 von Willebrand factor type A YP_001791347.1 2516370 D 395495 CDS YP_001791348.1 171058999 6161939 2517564..2518100 1 NC_010524.1 hypothetical protein 2518100 6161939 Lcho_2318 Leptothrix cholodnii SP-6 hypothetical protein YP_001791348.1 2517564 D 395495 CDS YP_001791349.1 171059000 6161940 2518343..2519833 1 NC_010524.1 KEGG: mpt:Mpe_A1065 polysaccharide biosynthesis protein, putative; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; undecaprenyl-phosphate glucose phosphotransferase 2519833 6161940 Lcho_2319 Leptothrix cholodnii SP-6 undecaprenyl-phosphate glucose phosphotransferase YP_001791349.1 2518343 D 395495 CDS YP_001791350.1 171059001 6163633 2519898..2521079 1 NC_010524.1 PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_4866 major facilitator superfamily MFS_1; major facilitator transporter 2521079 6163633 Lcho_2320 Leptothrix cholodnii SP-6 major facilitator transporter YP_001791350.1 2519898 D 395495 CDS YP_001791351.1 171059002 6163634 2521237..2521836 1 NC_010524.1 KEGG: aav:Aave_3972 hypothetical protein; hypothetical protein 2521836 6163634 Lcho_2321 Leptothrix cholodnii SP-6 hypothetical protein YP_001791351.1 2521237 D 395495 CDS YP_001791352.1 171059003 6163635 complement(2521843..2522775) 1 NC_010524.1 PFAM: dienelactone hydrolase; KEGG: azo:azo2340 dienelactone hydrolase family protein; carboxymethylenebutenolidase 2522775 6163635 Lcho_2322 Leptothrix cholodnii SP-6 carboxymethylenebutenolidase YP_001791352.1 2521843 R 395495 CDS YP_001791353.1 171059004 6163636 complement(2522888..2524210) 1 NC_010524.1 KEGG: mpt:Mpe_A0606 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 2524210 6163636 Lcho_2323 Leptothrix cholodnii SP-6 nucleotide sugar dehydrogenase YP_001791353.1 2522888 R 395495 CDS YP_001791354.1 171059005 6163637 complement(2524416..2525021) 1 NC_010524.1 PFAM: protein of unknown function DUF1555; KEGG: dar:Daro_1502 protein of unknown function DUF1555; hypothetical protein 2525021 6163637 Lcho_2324 Leptothrix cholodnii SP-6 hypothetical protein YP_001791354.1 2524416 R 395495 CDS YP_001791355.1 171059006 6163638 2525325..2525777 1 NC_010524.1 KEGG: tbd:Tbd_0523 hypothetical protein; hypothetical protein 2525777 6163638 Lcho_2325 Leptothrix cholodnii SP-6 hypothetical protein YP_001791355.1 2525325 D 395495 CDS YP_001791356.1 171059007 6163639 complement(2525938..2526357) 1 NC_010524.1 KEGG: tbd:Tbd_0352 hypothetical protein; hypothetical protein 2526357 6163639 Lcho_2326 Leptothrix cholodnii SP-6 hypothetical protein YP_001791356.1 2525938 R 395495 CDS YP_001791357.1 171059008 6161107 2526785..2527405 1 NC_010524.1 KEGG: mfa:Mfla_1718 protein of unknown function DUF1555; hypothetical protein 2527405 6161107 Lcho_2327 Leptothrix cholodnii SP-6 hypothetical protein YP_001791357.1 2526785 D 395495 CDS YP_001791358.1 171059009 6161108 2527692..2528237 1 NC_010524.1 KEGG: dar:Daro_3745 protein of unknown function DUF1555; hypothetical protein 2528237 6161108 Lcho_2328 Leptothrix cholodnii SP-6 hypothetical protein YP_001791358.1 2527692 D 395495 CDS YP_001791359.1 171059010 6161109 2528400..2528783 1 NC_010524.1 PFAM: Endoribonuclease L-PSP; KEGG: xac:XAC1371 hypothetical protein; endoribonuclease L-PSP 2528783 6161109 Lcho_2329 Leptothrix cholodnii SP-6 endoribonuclease L-PSP YP_001791359.1 2528400 D 395495 CDS YP_001791360.1 171059011 6161110 complement(2528818..2530383) 1 NC_010524.1 PFAM: protein of unknown function DUF1703; KEGG: eba:ebA5943 hypothetical protein; hypothetical protein 2530383 6161110 Lcho_2330 Leptothrix cholodnii SP-6 hypothetical protein YP_001791360.1 2528818 R 395495 CDS YP_001791361.1 171059012 6161111 complement(2530388..2530648) 1 NC_010524.1 KEGG: syn:ssl2065 hypothetical protein; hypothetical protein 2530648 6161111 Lcho_2331 Leptothrix cholodnii SP-6 hypothetical protein YP_001791361.1 2530388 R 395495 CDS YP_001791362.1 171059013 6161112 2530841..2531227 1 NC_010524.1 KEGG: cph:Cpha266_0766 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 2531227 6161112 Lcho_2332 Leptothrix cholodnii SP-6 DNA polymerase subunit beta YP_001791362.1 2530841 D 395495 CDS YP_001791363.1 171059014 6161113 2531215..2531625 1 NC_010524.1 PFAM: protein of unknown function DUF86; KEGG: cph:Cpha266_0768 protein of unknown function DUF86; hypothetical protein 2531625 6161113 Lcho_2333 Leptothrix cholodnii SP-6 hypothetical protein YP_001791363.1 2531215 D 395495 CDS YP_001791364.1 171059015 6160116 complement(2531650..2533221) 1 NC_010524.1 PFAM: protein of unknown function DUF1703; KEGG: eba:ebA5943 hypothetical protein; hypothetical protein 2533221 6160116 Lcho_2334 Leptothrix cholodnii SP-6 hypothetical protein YP_001791364.1 2531650 R 395495 CDS YP_001791365.1 171059016 6160117 complement(2533250..2534845) 1 NC_010524.1 PFAM: protein of unknown function DUF1703; KEGG: eba:ebA5943 hypothetical protein; hypothetical protein 2534845 6160117 Lcho_2335 Leptothrix cholodnii SP-6 hypothetical protein YP_001791365.1 2533250 R 395495 CDS YP_001791366.1 171059017 6160118 complement(2534874..2536457) 1 NC_010524.1 PFAM: protein of unknown function DUF1703; KEGG: eba:ebA5943 hypothetical protein; hypothetical protein 2536457 6160118 Lcho_2336 Leptothrix cholodnii SP-6 hypothetical protein YP_001791366.1 2534874 R 395495 CDS YP_001791367.1 171059018 6160119 complement(2536486..2538063) 1 NC_010524.1 PFAM: protein of unknown function DUF1703; KEGG: eba:ebA5943 hypothetical protein; hypothetical protein 2538063 6160119 Lcho_2337 Leptothrix cholodnii SP-6 hypothetical protein YP_001791367.1 2536486 R 395495 CDS YP_001791368.1 171059019 6160120 2538296..2538778 1 NC_010524.1 KEGG: mfa:Mfla_1132 protein of unknown function DUF1555; hypothetical protein 2538778 6160120 Lcho_2338 Leptothrix cholodnii SP-6 hypothetical protein YP_001791368.1 2538296 D 395495 CDS YP_001791369.1 171059020 6160121 2539047..2539940 1 NC_010524.1 KEGG: nmu:Nmul_A1261 hypothetical protein; hypothetical protein 2539940 6160121 Lcho_2339 Leptothrix cholodnii SP-6 hypothetical protein YP_001791369.1 2539047 D 395495 CDS YP_001791370.1 171059021 6160122 complement(2540058..2542754) 1 NC_010524.1 KEGG: rsp:RSP_4027 hypothetical protein with parallel beta-helix repeat; hypothetical protein 2542754 6160122 Lcho_2340 Leptothrix cholodnii SP-6 hypothetical protein YP_001791370.1 2540058 R 395495 CDS YP_001791371.1 171059022 6159718 complement(2543595..2544368) 1 NC_010524.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: cpe:CPE0496 N-acetyl-mannosamine transferase; WecB/TagA/CpsF family glycosyl transferase 2544368 6159718 Lcho_2341 Leptothrix cholodnii SP-6 WecB/TagA/CpsF family glycosyl transferase YP_001791371.1 2543595 R 395495 CDS YP_001791372.1 171059023 6159719 complement(2544361..2545284) 1 NC_010524.1 PFAM: glycosyl transferase family 2; KEGG: bra:BRADO4817 putative glycosyltransferase (family 2); glycosyl transferase family protein 2545284 6159719 Lcho_2342 Leptothrix cholodnii SP-6 glycosyl transferase family protein YP_001791372.1 2544361 R 395495 CDS YP_001791373.1 171059024 6159720 complement(2545323..2546375) 1 NC_010524.1 PFAM: glycosyl transferase group 1; KEGG: mfa:Mfla_2015 glycosyl transferase, group 1; group 1 glycosyl transferase 2546375 6159720 Lcho_2343 Leptothrix cholodnii SP-6 group 1 glycosyl transferase YP_001791373.1 2545323 R 395495 CDS YP_001791374.1 171059025 6159721 complement(2546580..2547638) 1 NC_010524.1 PFAM: glycoside hydrolase family 5; KEGG: psa:PST_2494 endoglucanase precursor(endo-1,4-beta-glucanase)protein; glycoside hydrolase family protein 2547638 6159721 Lcho_2344 Leptothrix cholodnii SP-6 glycoside hydrolase family protein YP_001791374.1 2546580 R 395495 CDS YP_001791375.1 171059026 6159722 complement(2547654..2548394) 1 NC_010524.1 PFAM: glycosyl transferase family 2; KEGG: gsu:GSU1961 glycosyl transferase, group 2 family protein; glycosyl transferase family protein 2548394 6159722 Lcho_2345 Leptothrix cholodnii SP-6 glycosyl transferase family protein YP_001791375.1 2547654 R 395495 CDS YP_001791376.1 171059027 6159723 complement(2548426..2549871) 1 NC_010524.1 PFAM: O-antigen polymerase; KEGG: pol:Bpro_1889 O-antigen polymerase; O-antigen polymerase 2549871 6159723 Lcho_2346 Leptothrix cholodnii SP-6 O-antigen polymerase YP_001791376.1 2548426 R 395495 CDS YP_001791377.1 171059028 6159724 complement(2549931..2551430) 1 NC_010524.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: mpt:Mpe_A1061 membrane protein; polysaccharide biosynthesis protein 2551430 6159724 Lcho_2347 Leptothrix cholodnii SP-6 polysaccharide biosynthesis protein YP_001791377.1 2549931 R 395495 CDS YP_001791378.1 171059029 6159794 complement(2551519..2552934) 1 NC_010524.1 KEGG: mpt:Mpe_A0629 mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2552934 6159794 Lcho_2348 Leptothrix cholodnii SP-6 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_001791378.1 2551519 R 395495 CDS YP_001791379.1 171059030 6159795 complement(2552990..2554114) 1 NC_010524.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: mpt:Mpe_A2731 GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 2554114 6159795 Lcho_2349 Leptothrix cholodnii SP-6 GDP-mannose 4,6-dehydratase YP_001791379.1 2552990 R 395495 CDS YP_001791380.1 171059031 6159796 complement(2554147..2555085) 1 NC_010524.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: ret:RHE_CH00763 GDP-L-fucose synthase protein; NAD-dependent epimerase/dehydratase 2555085 6159796 Lcho_2350 Leptothrix cholodnii SP-6 NAD-dependent epimerase/dehydratase YP_001791380.1 2554147 R 395495 CDS YP_001791381.1 171059032 6159797 complement(2555122..2555838) 1 NC_010524.1 TIGRFAM: EpsI family protein; KEGG: hch:HCH_03424 hypothetical protein; EpsI family protein 2555838 6159797 Lcho_2351 Leptothrix cholodnii SP-6 EpsI family protein YP_001791381.1 2555122 R 395495 CDS YP_001791382.1 171059033 6159798 complement(2555835..2556767) 1 NC_010524.1 TIGRFAM: eight transmembrane protein EpsH; exosortase 2; PFAM: Eight transmembrane protein EpsH; KEGG: nmu:Nmul_A0246 hypothetical protein; exosortase 2 2556767 6159798 Lcho_2352 Leptothrix cholodnii SP-6 exosortase 2 YP_001791382.1 2555835 R 395495 CDS YP_001791383.1 171059034 6159799 complement(2556964..2557611) 1 NC_010524.1 hypothetical protein 2557611 6159799 Lcho_2353 Leptothrix cholodnii SP-6 hypothetical protein YP_001791383.1 2556964 R 395495 CDS YP_001791384.1 171059035 6159800 2558225..2558497 1 NC_010524.1 TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: rso:RSc3225 hypothetical protein; CopG/Arc/MetJ family addiction module antidote protein 2558497 6159800 Lcho_2354 Leptothrix cholodnii SP-6 CopG/Arc/MetJ family addiction module antidote protein YP_001791384.1 2558225 D 395495 CDS YP_001791385.1 171059036 6160013 2558757..2559701 1 NC_010524.1 KEGG: pol:Bpro_1568 hypothetical protein; hypothetical protein 2559701 6160013 Lcho_2355 Leptothrix cholodnii SP-6 hypothetical protein YP_001791385.1 2558757 D 395495 CDS YP_001791386.1 171059037 6160014 2559778..2560554 1 NC_010524.1 hypothetical protein 2560554 6160014 Lcho_2356 Leptothrix cholodnii SP-6 hypothetical protein YP_001791386.1 2559778 D 395495 CDS YP_001791387.1 171059038 6160015 2560551..2561417 1 NC_010524.1 hypothetical protein 2561417 6160015 Lcho_2357 Leptothrix cholodnii SP-6 hypothetical protein YP_001791387.1 2560551 D 395495 CDS YP_001791388.1 171059039 6160016 2561417..2562742 1 NC_010524.1 hypothetical protein 2562742 6160016 Lcho_2358 Leptothrix cholodnii SP-6 hypothetical protein YP_001791388.1 2561417 D 395495 CDS YP_001791389.1 171059040 6160017 2562828..2563562 1 NC_010524.1 hypothetical protein 2563562 6160017 Lcho_2359 Leptothrix cholodnii SP-6 hypothetical protein YP_001791389.1 2562828 D 395495 CDS YP_001791390.1 171059041 6160018 2563727..2564875 1 NC_010524.1 KEGG: tte:TTE0277 cellulose biosynthesis protein; cellulose biosynthesis protein CelD 2564875 6160018 Lcho_2360 Leptothrix cholodnii SP-6 cellulose biosynthesis protein CelD YP_001791390.1 2563727 D 395495 CDS YP_001791391.1 171059042 6160019 complement(2564908..2565483) 1 NC_010524.1 PFAM: protein of unknown function DUF820; KEGG: pna:Pnap_0294 protein of unknown function DUF820; hypothetical protein 2565483 6160019 Lcho_2361 Leptothrix cholodnii SP-6 hypothetical protein YP_001791391.1 2564908 R 395495 CDS YP_001791392.1 171059043 6159750 2565641..2566807 1 NC_010524.1 KEGG: pol:Bpro_4981 hypothetical protein; hypothetical protein 2566807 6159750 Lcho_2362 Leptothrix cholodnii SP-6 hypothetical protein YP_001791392.1 2565641 D 395495 CDS YP_001791393.1 171059044 6159751 complement(2566850..2568388) 1 NC_010524.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mpt:Mpe_A0586 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2568388 6159751 Lcho_2363 Leptothrix cholodnii SP-6 methyl-accepting chemotaxis sensory transducer YP_001791393.1 2566850 R 395495 CDS YP_001791394.1 171059045 6159752 complement(2568468..2568950) 1 NC_010524.1 PFAM: Cache type 2 domain protein; KEGG: rpe:RPE_1803 cache, type 2; cache type 2 domain-containing protein 2568950 6159752 Lcho_2364 Leptothrix cholodnii SP-6 cache type 2 domain-containing protein YP_001791394.1 2568468 R 395495 CDS YP_001791395.1 171059046 6159753 complement(2569152..2570072) 1 NC_010524.1 TIGRFAM: capsular exopolysaccharide family; KEGG: mpt:Mpe_A2732 tyrosine kinase; exopolysaccharide tyrosine-protein kinase 2570072 6159753 Lcho_2365 Leptothrix cholodnii SP-6 exopolysaccharide tyrosine-protein kinase YP_001791395.1 2569152 R 395495 CDS YP_001791396.1 171059047 6159754 complement(2570116..2571534) 1 NC_010524.1 TIGRFAM: chain length determinant protein EpsF; PFAM: lipopolysaccharide biosynthesis protein; KEGG: mpt:Mpe_A2733 chain length determinant protein; chain length determinant protein EpsF 2571534 6159754 Lcho_2366 Leptothrix cholodnii SP-6 chain length determinant protein EpsF YP_001791396.1 2570116 R 395495 CDS YP_001791397.1 171059048 6159755 complement(2571578..2572366) 1 NC_010524.1 TIGRFAM: polysaccharide export protein EpsE; PFAM: polysaccharide export protein; KEGG: mpt:Mpe_A2734 capsular polysaccharide export protein, putative; polysaccharide export protein EpsE 2572366 6159755 Lcho_2367 Leptothrix cholodnii SP-6 polysaccharide export protein EpsE YP_001791397.1 2571578 R 395495 CDS YP_001791398.1 171059049 6159756 complement(2572512..2573411) 1 NC_010524.1 TIGRFAM: peptidyl-prolyl cis-trans isomerase, EpsD family; KEGG: mpt:Mpe_A0738 hypothetical protein; peptidyl-prolyl cis-trans isomerase 2573411 6159756 Lcho_2368 Leptothrix cholodnii SP-6 peptidyl-prolyl cis-trans isomerase YP_001791398.1 2572512 R 395495 CDS YP_001791399.1 171059050 6160039 complement(2573667..2574509) 1 NC_010524.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: azc:AZC_4534 transcriptional regulator; IclR family transcriptional regulator 2574509 6160039 Lcho_2369 Leptothrix cholodnii SP-6 IclR family transcriptional regulator YP_001791399.1 2573667 R 395495 CDS YP_001791400.1 171059051 6160040 2574687..2575865 1 NC_010524.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 2575865 6160040 Lcho_2370 Leptothrix cholodnii SP-6 acetyl-CoA acetyltransferase YP_001791400.1 2574687 D 395495 CDS YP_001791401.1 171059052 6160041 2575862..2577460 1 NC_010524.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 2577460 6160041 Lcho_2371 Leptothrix cholodnii SP-6 acyl-CoA synthetase YP_001791401.1 2575862 D 395495 CDS YP_001791402.1 171059053 6160042 2577503..2578519 1 NC_010524.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pnu:Pnuc_1539 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit Dctp 2578519 6160042 Lcho_2372 Leptothrix cholodnii SP-6 TRAP dicarboxylate transporter subunit Dctp YP_001791402.1 2577503 D 395495 CDS YP_001791403.1 171059054 6160043 2578529..2580397 1 NC_010524.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vei:Veis_4815 TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP C4-dicarboxylate transport system permease DctM 2580397 6160043 Lcho_2373 Leptothrix cholodnii SP-6 TRAP C4-dicarboxylate transport system permease DctM YP_001791403.1 2578529 D 395495 CDS YP_001791404.1 171059055 6160044 complement(2580402..2581271) 1 NC_010524.1 KEGG: bra:BRADO4016 hypothetical protein; hypothetical protein 2581271 6160044 Lcho_2374 Leptothrix cholodnii SP-6 hypothetical protein YP_001791404.1 2580402 R 395495 CDS YP_001791405.1 171059056 6160045 complement(2581298..2582095) 1 NC_010524.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_0097 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2582095 6160045 Lcho_2375 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001791405.1 2581298 R 395495 CDS YP_001791406.1 171059057 6159930 2582208..2582921 1 NC_010524.1 PFAM: protein of unknown function DUF28; KEGG: pna:Pnap_3561 protein of unknown function DUF28; hypothetical protein 2582921 6159930 Lcho_2376 Leptothrix cholodnii SP-6 hypothetical protein YP_001791406.1 2582208 D 395495 CDS YP_001791407.1 171059058 6159931 complement(2582940..2583824) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dac:Daci_4014 transcriptional regulator, LysR family; LysR family transcriptional regulator 2583824 6159931 Lcho_2377 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001791407.1 2582940 R 395495 CDS YP_001791408.1 171059059 6159932 2583974..2584957 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_4524 uncharacterized protein UPF0065; hypothetical protein 2584957 6159932 Lcho_2378 Leptothrix cholodnii SP-6 hypothetical protein YP_001791408.1 2583974 D 395495 CDS YP_001791409.1 171059060 6159933 2584987..2586195 1 NC_010524.1 KEGG: pol:Bpro_4523 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2586195 6159933 Lcho_2379 Leptothrix cholodnii SP-6 amidohydrolase YP_001791409.1 2584987 D 395495 CDS YP_001791410.1 171059061 6159934 2586470..2587756 1 NC_010524.1 PFAM: FAD dependent oxidoreductase; KEGG: aav:Aave_4507 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase 2587756 6159934 Lcho_2380 Leptothrix cholodnii SP-6 D-amino-acid dehydrogenase YP_001791410.1 2586470 D 395495 CDS YP_001791411.1 171059062 6160084 2587996..2588295 1 NC_010524.1 PFAM: transposase IS3/IS911 family protein; KEGG: pol:Bpro_4705 hypothetical protein; transposase IS3/IS911 family protein 2588295 6160084 Lcho_2381 Leptothrix cholodnii SP-6 transposase IS3/IS911 family protein YP_001791411.1 2587996 D 395495 CDS YP_001791412.1 171059063 6160085 2588292..2589179 1 NC_010524.1 PFAM: Integrase catalytic region; KEGG: pol:Bpro_4706 integrase, catalytic region; integrase catalytic subunit 2589179 6160085 Lcho_2382 Leptothrix cholodnii SP-6 integrase catalytic subunit YP_001791412.1 2588292 D 395495 CDS YP_001791413.1 171059064 6160086 complement(2589074..2590357) 1 NC_010524.1 PFAM: integrase family protein; KEGG: rfr:Rfer_1354 phage integrase; integrase family protein 2590357 6160086 Lcho_2383 Leptothrix cholodnii SP-6 integrase family protein YP_001791413.1 2589074 R 395495 CDS YP_001791414.1 171059065 6160088 complement(2590698..2591519) 1 NC_010524.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 2591519 apaH 6160088 apaH Leptothrix cholodnii SP-6 diadenosine tetraphosphatase YP_001791414.1 2590698 R 395495 CDS YP_001791415.1 171059066 6160089 2591582..2592883 1 NC_010524.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: mpt:Mpe_A2853 CBS domain protein; hypothetical protein 2592883 6160089 Lcho_2385 Leptothrix cholodnii SP-6 hypothetical protein YP_001791415.1 2591582 D 395495 CDS YP_001791416.1 171059067 6159905 2592880..2593674 1 NC_010524.1 PFAM: SapC family protein; KEGG: pin:Ping_3347 SapC family protein; SapC family protein 2593674 6159905 Lcho_2386 Leptothrix cholodnii SP-6 SapC family protein YP_001791416.1 2592880 D 395495 CDS YP_001791417.1 171059068 6159906 complement(2593723..2595267) 1 NC_010524.1 PFAM: protein of unknown function DUF1501; KEGG: aav:Aave_4705 protein of unknown function DUF1501; hypothetical protein 2595267 6159906 Lcho_2387 Leptothrix cholodnii SP-6 hypothetical protein YP_001791417.1 2593723 R 395495 CDS YP_001791418.1 171059069 6159907 complement(2595276..2597090) 1 NC_010524.1 PFAM: Protein of unknown function DUF1800; KEGG: aav:Aave_4704 hypothetical protein; hypothetical protein 2597090 6159907 Lcho_2388 Leptothrix cholodnii SP-6 hypothetical protein YP_001791418.1 2595276 R 395495 CDS YP_001791419.1 171059070 6159908 complement(2597241..2598269) 1 NC_010524.1 KEGG: dar:Daro_1192 putative poly-gamma-glutamate biosynthesis enzyme; putative poly-gamma-glutamate biosynthesis enzyme 2598269 6159908 Lcho_2389 Leptothrix cholodnii SP-6 putative poly-gamma-glutamate biosynthesis enzyme YP_001791419.1 2597241 R 395495 CDS YP_001791420.1 171059071 6159909 complement(2598266..2598694) 1 NC_010524.1 KEGG: dar:Daro_1193 hypothetical protein; hypothetical protein 2598694 6159909 Lcho_2390 Leptothrix cholodnii SP-6 hypothetical protein YP_001791420.1 2598266 R 395495 CDS YP_001791421.1 171059072 6159910 complement(2598739..2599233) 1 NC_010524.1 PFAM: cyclic nucleotide-binding; KEGG: afw:Anae109_3203 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 2599233 6159910 Lcho_2391 Leptothrix cholodnii SP-6 cyclic nucleotide-binding protein YP_001791421.1 2598739 R 395495 CDS YP_001791422.1 171059073 6159911 2599370..2600641 1 NC_010524.1 KEGG: pen:PSEEN4336 hypothetical protein; hypothetical protein 2600641 6159911 Lcho_2392 Leptothrix cholodnii SP-6 hypothetical protein YP_001791422.1 2599370 D 395495 CDS YP_001791423.1 171059074 6160883 2600711..2601520 1 NC_010524.1 hypothetical protein 2601520 6160883 Lcho_2393 Leptothrix cholodnii SP-6 hypothetical protein YP_001791423.1 2600711 D 395495 CDS YP_001791424.1 171059075 6160884 2601517..2602140 1 NC_010524.1 KEGG: noc:Noc_0133 conserved hypothetical ATP binding protein; ATP-binding protein 2602140 6160884 Lcho_2394 Leptothrix cholodnii SP-6 ATP-binding protein YP_001791424.1 2601517 D 395495 CDS YP_001791425.1 171059076 6160885 2602204..2602725 1 NC_010524.1 hypothetical protein 2602725 6160885 Lcho_2395 Leptothrix cholodnii SP-6 hypothetical protein YP_001791425.1 2602204 D 395495 CDS YP_001791426.1 171059077 6160886 2602722..2603099 1 NC_010524.1 KEGG: scl:sce1477 hypothetical protein; hypothetical protein 2603099 6160886 Lcho_2396 Leptothrix cholodnii SP-6 hypothetical protein YP_001791426.1 2602722 D 395495 CDS YP_001791427.1 171059078 6160887 complement(2603124..2603822) 1 NC_010524.1 KEGG: mpt:Mpe_A2747 putative lipoprotein releasing system ATP-binding ABC transporter; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; lipoprotein releasing system, ATP-binding protein 2603822 6160887 Lcho_2397 Leptothrix cholodnii SP-6 lipoprotein releasing system, ATP-binding protein YP_001791427.1 2603124 R 395495 CDS YP_001791428.1 171059079 6160888 complement(2603815..2605071) 1 NC_010524.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: mpt:Mpe_A2748 putative lipoprotein releasing system transmembrane; LolC/E family lipoprotein releasing system, transmembrane protein 2605071 6160888 Lcho_2398 Leptothrix cholodnii SP-6 LolC/E family lipoprotein releasing system, transmembrane protein YP_001791428.1 2603815 R 395495 CDS YP_001791429.1 171059080 6160889 2605169..2606209 1 NC_010524.1 KEGG: mpt:Mpe_A2750 conserved hypothetical signal peptide protein; putative signal peptide protein 2606209 6160889 Lcho_2399 Leptothrix cholodnii SP-6 putative signal peptide protein YP_001791429.1 2605169 D 395495 CDS YP_001791430.1 171059081 6161412 2606211..2607950 1 NC_010524.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: mpt:Mpe_A2751 putative single-stranded-DNA-specific exonuclease; single-stranded-DNA-specific exonuclease RecJ 2607950 6161412 Lcho_2400 Leptothrix cholodnii SP-6 single-stranded-DNA-specific exonuclease RecJ YP_001791430.1 2606211 D 395495 CDS YP_001791431.1 171059082 6161413 complement(2607987..2609144) 1 NC_010524.1 PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_3951 extracellular ligand-binding receptor; extracellular ligand-binding receptor 2609144 6161413 Lcho_2401 Leptothrix cholodnii SP-6 extracellular ligand-binding receptor YP_001791431.1 2607987 R 395495 CDS YP_001791432.1 171059083 6161414 complement(2609195..2609812) 1 NC_010524.1 PFAM: regulatory protein TetR; KEGG: dac:Daci_0571 transcriptional regulator, TetR family; TetR family transcriptional regulator 2609812 6161414 Lcho_2402 Leptothrix cholodnii SP-6 TetR family transcriptional regulator YP_001791432.1 2609195 R 395495 CDS YP_001791433.1 171059084 6161415 complement(2609844..2611154) 1 NC_010524.1 KEGG: dac:Daci_0570 phenylacetate-CoA ligase; TIGRFAM: phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; phenylacetate-CoA ligase 2611154 6161415 Lcho_2403 Leptothrix cholodnii SP-6 phenylacetate-CoA ligase YP_001791433.1 2609844 R 395495 CDS YP_001791434.1 171059085 6161416 complement(2611190..2611642) 1 NC_010524.1 TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: azo:azo0302 phenylacetic acid degradation protein PaaI; phenylacetic acid degradation protein PaaD 2611642 6161416 Lcho_2404 Leptothrix cholodnii SP-6 phenylacetic acid degradation protein PaaD YP_001791434.1 2611190 R 395495 CDS YP_001791435.1 171059086 6161417 complement(2611647..2612465) 1 NC_010524.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: vei:Veis_3942 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 2612465 6161417 Lcho_2405 Leptothrix cholodnii SP-6 enoyl-CoA hydratase/isomerase YP_001791435.1 2611647 R 395495 CDS YP_001791436.1 171059087 6161418 2612601..2613227 1 NC_010524.1 TIGRFAM: phenylacetic acid degradation protein PaaY; KEGG: mpt:Mpe_A0983 transferase; phenylacetic acid degradation protein PaaY 2613227 6161418 Lcho_2406 Leptothrix cholodnii SP-6 phenylacetic acid degradation protein PaaY YP_001791436.1 2612601 D 395495 CDS YP_001791437.1 171059088 6163409 complement(2613274..2614299) 1 NC_010524.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: spe:Spro_3197 transcriptional regulator, LacI family; LacI family transcriptional regulator 2614299 6163409 Lcho_2407 Leptothrix cholodnii SP-6 LacI family transcriptional regulator YP_001791437.1 2613274 R 395495 CDS YP_001791438.1 171059089 6163410 complement(2614400..2615203) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_0058 ABC transporter related; ABC transporter-like protein 2615203 6163410 Lcho_2408 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001791438.1 2614400 R 395495 CDS YP_001791439.1 171059090 6163411 complement(2615205..2616326) 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_0059 inner-membrane translocator; monosaccharide-transporting ATPase 2616326 6163411 Lcho_2409 Leptothrix cholodnii SP-6 monosaccharide-transporting ATPase YP_001791439.1 2615205 R 395495 CDS YP_001791440.1 171059091 6163412 complement(2616463..2617395) 1 NC_010524.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_0060 periplasmic binding protein/LacI transcriptional regulator; periplasmic-binding protein/LacI transcriptional regulator 2617395 6163412 Lcho_2410 Leptothrix cholodnii SP-6 periplasmic-binding protein/LacI transcriptional regulator YP_001791440.1 2616463 R 395495 CDS YP_001791441.1 171059092 6163413 2617925..2618707 1 NC_010524.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mlo:mlr7629 hypothetical protein; xylose isomerase domain-containing protein 2618707 6163413 Lcho_2411 Leptothrix cholodnii SP-6 xylose isomerase domain-containing protein YP_001791441.1 2617925 D 395495 CDS YP_001791442.1 171059093 6163414 2618805..2619815 1 NC_010524.1 PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; KEGG: vei:Veis_0056 inositol 2-dehydrogenase; inositol 2-dehydrogenase 2619815 6163414 Lcho_2412 Leptothrix cholodnii SP-6 inositol 2-dehydrogenase YP_001791442.1 2618805 D 395495 CDS YP_001791443.1 171059094 6163415 2619819..2620754 1 NC_010524.1 PFAM: helix-turn-helix protein RpiR; KEGG: saq:Sare_3209 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 2620754 6163415 Lcho_2413 Leptothrix cholodnii SP-6 RpiR family transcriptional regulator YP_001791443.1 2619819 D 395495 CDS YP_001791444.1 171059095 6163788 2620851..2621684 1 NC_010524.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 2621684 aroE 6163788 aroE Leptothrix cholodnii SP-6 shikimate 5-dehydrogenase YP_001791444.1 2620851 D 395495 CDS YP_001791445.1 171059096 6163789 2621867..2622769 1 NC_010524.1 KEGG: reh:H16_A2424 hypothetical protein; hypothetical protein 2622769 6163789 Lcho_2415 Leptothrix cholodnii SP-6 hypothetical protein YP_001791445.1 2621867 D 395495 CDS YP_001791446.1 171059097 6163790 2622784..2623977 1 NC_010524.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_A2423 predicted acyl-CoA transferase/carnitine dehydratase; L-carnitine dehydratase/bile acid-inducible protein F 2623977 6163790 Lcho_2416 Leptothrix cholodnii SP-6 L-carnitine dehydratase/bile acid-inducible protein F YP_001791446.1 2622784 D 395495 CDS YP_001791447.1 171059098 6163791 2623979..2624794 1 NC_010524.1 PFAM: HpcH/HpaI aldolase; KEGG: pna:Pnap_3810 HpcH/HpaI aldolase; HpcH/HpaI aldolase 2624794 6163791 Lcho_2417 Leptothrix cholodnii SP-6 HpcH/HpaI aldolase YP_001791447.1 2623979 D 395495 CDS YP_001791448.1 171059099 6163792 2624832..2626178 1 NC_010524.1 PFAM: fumarate lyase; KEGG: pna:Pnap_3811 fumarate lyase; fumarate lyase 2626178 6163792 Lcho_2418 Leptothrix cholodnii SP-6 fumarate lyase YP_001791448.1 2624832 D 395495 CDS YP_001791449.1 171059100 6163793 2626274..2627416 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: pol:Bpro_4297 PAS/PAC sensor signal transduction histidine kinase; histidine kinase 2627416 6163793 Lcho_2419 Leptothrix cholodnii SP-6 histidine kinase YP_001791449.1 2626274 D 395495 CDS YP_001791450.1 171059101 6163794 2627502..2628233 1 NC_010524.1 PFAM: Glutathione S-transferase domain; KEGG: pol:Bpro_3007 glutathione S-transferase-like; glutathione S-transferase domain-containing protein 2628233 6163794 Lcho_2420 Leptothrix cholodnii SP-6 glutathione S-transferase domain-containing protein YP_001791450.1 2627502 D 395495 CDS YP_001791451.1 171059102 6164130 complement(2628250..2629188) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A2421 transcriptional regulator, LysR-family; LysR family transcriptional regulator 2629188 6164130 Lcho_2421 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001791451.1 2628250 R 395495 CDS YP_001791452.1 171059103 6164131 2629299..2631395 1 NC_010524.1 PFAM: conserved hypothetical protein; protein of unknown function DUF453; KEGG: pol:Bpro_4551 protein of unknown function DUF453; hypothetical protein 2631395 6164131 Lcho_2422 Leptothrix cholodnii SP-6 hypothetical protein YP_001791452.1 2629299 D 395495 CDS YP_001791453.1 171059104 6164132 2631433..2632506 1 NC_010524.1 KEGG: dac:Daci_5627 porin, gram-negative type; porin 2632506 6164132 Lcho_2423 Leptothrix cholodnii SP-6 porin YP_001791453.1 2631433 D 395495 CDS YP_001791454.1 171059105 6164133 complement(2632521..2633132) 1 NC_010524.1 PFAM: NIPSNAP family containing protein; KEGG: bja:bll3657 hypothetical protein; NIPSNAP family protein 2633132 6164133 Lcho_2424 Leptothrix cholodnii SP-6 NIPSNAP family protein YP_001791454.1 2632521 R 395495 CDS YP_001791455.1 171059106 6164134 complement(2633272..2634069) 1 NC_010524.1 PFAM: Shikimate dehydrogenase substrate binding domain protein; KEGG: pna:Pnap_2706 shikimate dehydrogenase; shikimate dehydrogenase 2634069 6164134 Lcho_2425 Leptothrix cholodnii SP-6 shikimate dehydrogenase YP_001791455.1 2633272 R 395495 CDS YP_001791456.1 171059107 6164135 2634187..2634996 1 NC_010524.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pna:Pnap_2705 regulatory proteins, IclR; IclR family transcriptional regulator 2634996 6164135 Lcho_2426 Leptothrix cholodnii SP-6 IclR family transcriptional regulator YP_001791456.1 2634187 D 395495 CDS YP_001791457.1 171059108 6164136 2635021..2636820 1 NC_010524.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: xau:Xaut_2701 fumarate reductase/succinate dehydrogenase flavoprotein domain protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 2636820 6164136 Lcho_2427 Leptothrix cholodnii SP-6 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_001791457.1 2635021 D 395495 CDS YP_001791458.1 171059109 6161009 complement(2636833..2637480) 1 NC_010524.1 PFAM: RES domain protein; KEGG: ajs:Ajs_1583 hypothetical protein; RES domain-containing protein 2637480 6161009 Lcho_2428 Leptothrix cholodnii SP-6 RES domain-containing protein YP_001791458.1 2636833 R 395495 CDS YP_001791459.1 171059110 6161010 complement(2637477..2638202) 1 NC_010524.1 KEGG: ajs:Ajs_1582 hypothetical protein; hypothetical protein 2638202 6161010 Lcho_2429 Leptothrix cholodnii SP-6 hypothetical protein YP_001791459.1 2637477 R 395495 CDS YP_001791460.1 171059111 6161011 2638559..2640445 1 NC_010524.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 2640445 6161011 Lcho_2430 Leptothrix cholodnii SP-6 thiamine biosynthesis protein ThiC YP_001791460.1 2638559 D 395495 CDS YP_001791461.1 171059112 6161012 2640456..2641559 1 NC_010524.1 PFAM: FAD dependent oxidoreductase; KEGG: mpt:Mpe_A1609 thiamine biosynthesis oxidoreductase ThiO, putative; FAD dependent oxidoreductase 2641559 6161012 Lcho_2431 Leptothrix cholodnii SP-6 FAD dependent oxidoreductase YP_001791461.1 2640456 D 395495 CDS YP_001791462.1 171059113 6161013 2641556..2641807 1 NC_010524.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: mpt:Mpe_A1608 sulfur transfer protein; thiamine biosynthesis protein ThiS 2641807 6161013 Lcho_2432 Leptothrix cholodnii SP-6 thiamine biosynthesis protein ThiS YP_001791462.1 2641556 D 395495 CDS YP_001791463.1 171059114 6161014 2641813..2642646 1 NC_010524.1 PFAM: thiazole biosynthesis family protein; KEGG: mpt:Mpe_A1607 thiamine biosynthesis protein ThiG; thiazole biosynthesis family protein 2642646 6161014 Lcho_2433 Leptothrix cholodnii SP-6 thiazole biosynthesis family protein YP_001791463.1 2641813 D 395495 CDS YP_001791464.1 171059115 6163640 2642668..2644509 1 NC_010524.1 PFAM: thiamine monophosphate synthase; Phosphomethylpyrimidine kinase type-1; KEGG: mpt:Mpe_A1606 phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase; phosphomethylpyrimidine kinase type-1 2644509 6163640 Lcho_2434 Leptothrix cholodnii SP-6 phosphomethylpyrimidine kinase type-1 YP_001791464.1 2642668 D 395495 CDS YP_001791465.1 171059116 6163641 2644754..2645467 1 NC_010524.1 KEGG: dar:Daro_0513 hypothetical protein; hypothetical protein 2645467 6163641 Lcho_2435 Leptothrix cholodnii SP-6 hypothetical protein YP_001791465.1 2644754 D 395495 CDS YP_001791466.1 171059117 6163642 2645587..2646318 1 NC_010524.1 PFAM: regulatory protein TetR; KEGG: mpt:Mpe_A1045 putative transcription regulator protein; TetR family transcriptional regulator 2646318 6163642 Lcho_2436 Leptothrix cholodnii SP-6 TetR family transcriptional regulator YP_001791466.1 2645587 D 395495 CDS YP_001791467.1 171059118 6163643 2646474..2647127 1 NC_010524.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; KEGG: mpt:Mpe_A1042 putative L-isoaspartate O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 2647127 6163643 Lcho_2437 Leptothrix cholodnii SP-6 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_001791467.1 2646474 D 395495 CDS YP_001791468.1 171059119 6163644 2647157..2647501 1 NC_010524.1 SMART: Rhodanese domain protein; KEGG: bur:Bcep18194_A4015 rhodanese-related sulfurtransferase; rhodanese domain-containing protein 2647501 6163644 Lcho_2438 Leptothrix cholodnii SP-6 rhodanese domain-containing protein YP_001791468.1 2647157 D 395495 CDS YP_001791469.1 171059120 6163645 2647556..2648887 1 NC_010524.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: mpt:Mpe_A1041 type I secretion outer membrane efflux protein; TolC family type I secretion outer membrane protein 2648887 6163645 Lcho_2439 Leptothrix cholodnii SP-6 TolC family type I secretion outer membrane protein YP_001791469.1 2647556 D 395495 CDS YP_001791470.1 171059121 6163646 complement(2648900..2649991) 1 NC_010524.1 KEGG: mpt:Mpe_A3522 hypothetical protein; hypothetical protein 2649991 6163646 Lcho_2440 Leptothrix cholodnii SP-6 hypothetical protein YP_001791470.1 2648900 R 395495 CDS YP_001791471.1 171059122 6161861 complement(2650101..2650370) 1 NC_010524.1 PFAM: thiamineS protein; KEGG: ade:Adeh_2222 thiamineS; sulfur transfer protein ThisS 2650370 6161861 Lcho_2441 Leptothrix cholodnii SP-6 sulfur transfer protein ThisS YP_001791471.1 2650101 R 395495 CDS YP_001791472.1 171059123 6161862 complement(2650448..2651764) 1 NC_010524.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: mpt:Mpe_A2140 putative 3-deoxy-D-manno-octulosonic-acid transferase transmembrane protein, gene; 3-deoxy-D-manno-octulosonic-acid transferase 2651764 6161862 Lcho_2442 Leptothrix cholodnii SP-6 3-deoxy-D-manno-octulosonic-acid transferase YP_001791472.1 2650448 R 395495 CDS YP_001791473.1 171059124 6161863 complement(2651779..2653197) 1 NC_010524.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: mpt:Mpe_A2141 phosphomannomutase; phosphomannomutase 2653197 6161863 Lcho_2443 Leptothrix cholodnii SP-6 phosphomannomutase YP_001791473.1 2651779 R 395495 CDS YP_001791474.1 171059125 6161864 2653465..2653818 1 NC_010524.1 TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; KEGG: mpt:Mpe_A2816 HypA protein; hydrogenase nickel incorporation protein HypA 2653818 6161864 Lcho_2444 Leptothrix cholodnii SP-6 hydrogenase nickel incorporation protein HypA YP_001791474.1 2653465 D 395495 CDS YP_001791475.1 171059126 6161865 2653822..2654793 1 NC_010524.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: rme:Rmet_1285 hydrogenase accessory protein HypB; hydrogenase nickel incorporation protein HypB 2654793 6161865 Lcho_2445 Leptothrix cholodnii SP-6 hydrogenase nickel incorporation protein HypB YP_001791475.1 2653822 D 395495 CDS YP_001791476.1 171059127 6161866 2654797..2655984 1 NC_010524.1 KEGG: rme:Rmet_1284 hydrogenase maturation protein HypF; hydrogenase maturation protein HypF 2655984 6161866 Lcho_2446 Leptothrix cholodnii SP-6 hydrogenase maturation protein HypF YP_001791476.1 2654797 D 395495 CDS YP_001791477.1 171059128 6161867 2655987..2656250 1 NC_010524.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: rme:Rmet_1283 hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF 2656250 6161867 Lcho_2447 Leptothrix cholodnii SP-6 hydrogenase assembly chaperone HypC/HupF YP_001791477.1 2655987 D 395495 CDS YP_001791478.1 171059129 6161641 2656247..2657386 1 NC_010524.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: mpt:Mpe_A2812 HypD' protein; hydrogenase expression/formation protein HypD 2657386 6161641 Lcho_2448 Leptothrix cholodnii SP-6 hydrogenase expression/formation protein HypD YP_001791478.1 2656247 D 395495 CDS YP_001791479.1 171059130 6161642 2657383..2658438 1 NC_010524.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: rme:Rmet_1281 hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE 2658438 6161642 Lcho_2449 Leptothrix cholodnii SP-6 hydrogenase expression/formation protein HypE YP_001791479.1 2657383 D 395495 CDS YP_001791480.1 171059131 6161643 2658464..2660236 1 NC_010524.1 PFAM: Enoyl-CoA hydratase/isomerase; formyl transferase domain protein; KEGG: mpt:Mpe_A2809 putative sensor protein; formyl transferase domain-containing protein 2660236 6161643 Lcho_2450 Leptothrix cholodnii SP-6 formyl transferase domain-containing protein YP_001791480.1 2658464 D 395495 CDS YP_001791481.1 171059132 6161644 complement(2660289..2662829) 1 NC_010524.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; KEGG: aha:AHA_2188 PAS; multi-sensor hybrid histidine kinase 2662829 6161644 Lcho_2451 Leptothrix cholodnii SP-6 multi-sensor hybrid histidine kinase YP_001791481.1 2660289 R 395495 CDS YP_001791482.1 171059133 6161645 complement(2662846..2663979) 1 NC_010524.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: aha:AHA_2190 response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; response regulator receiver modulated metal dependent phosphohydrolase 2663979 6161645 Lcho_2452 Leptothrix cholodnii SP-6 response regulator receiver modulated metal dependent phosphohydrolase YP_001791482.1 2662846 R 395495 CDS YP_001791483.1 171059134 6161646 complement(2664055..2664858) 1 NC_010524.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: swi:Swit_3272 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 2664858 6161646 Lcho_2453 Leptothrix cholodnii SP-6 enoyl-CoA hydratase/isomerase YP_001791483.1 2664055 R 395495 CDS YP_001791484.1 171059135 6161647 complement(2664994..2665857) 1 NC_010524.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bpt:Bpet3943 2-hydroxyhepta-2,4-diene-1,7-dioateisomerase / 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioatedecarboxylase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2665857 6161647 Lcho_2454 Leptothrix cholodnii SP-6 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_001791484.1 2664994 R 395495 CDS YP_001791485.1 171059136 6163344 complement(2665915..2666670) 1 NC_010524.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpt:Bpet3944 oxidoreductase; short-chain dehydrogenase/reductase SDR 2666670 6163344 Lcho_2455 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001791485.1 2665915 R 395495 CDS YP_001791486.1 171059137 6163345 complement(2666727..2667926) 1 NC_010524.1 KEGG: aav:Aave_0753 hypothetical protein; hypothetical protein 2667926 6163345 Lcho_2456 Leptothrix cholodnii SP-6 hypothetical protein YP_001791486.1 2666727 R 395495 CDS YP_001791487.1 171059138 6163346 complement(2667980..2669761) 1 NC_010524.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 2669761 6163346 Lcho_2457 Leptothrix cholodnii SP-6 dihydroxy-acid dehydratase YP_001791487.1 2667980 R 395495 CDS YP_001791488.1 171059139 6163347 complement(2669833..2670843) 1 NC_010524.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: aav:Aave_0755 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit Dctp 2670843 6163347 Lcho_2458 Leptothrix cholodnii SP-6 TRAP dicarboxylate transporter subunit Dctp YP_001791488.1 2669833 R 395495 CDS YP_001791489.1 171059140 6163348 2671031..2671963 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_0756 transcriptional regulator, LysR family; LysR family transcriptional regulator 2671963 6163348 Lcho_2459 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001791489.1 2671031 D 395495 CDS YP_001791490.1 171059141 6163349 complement(2672009..2673592) 1 NC_010524.1 PFAM: Aldehyde Dehydrogenase_; KEGG: pap:PSPA7_3072 probable aldehyde dehydrogenase; aldehyde dehydrogenase 2673592 6163349 Lcho_2460 Leptothrix cholodnii SP-6 aldehyde dehydrogenase YP_001791490.1 2672009 R 395495 CDS YP_001791491.1 171059142 6163350 complement(2673721..2674500) 1 NC_010524.1 catalyzes the formation of propanoyl-CoA from methylmalonyl-CoA; methylmalonyl-CoA decarboxylase 2674500 6163350 Lcho_2461 Leptothrix cholodnii SP-6 methylmalonyl-CoA decarboxylase YP_001791491.1 2673721 R 395495 CDS YP_001791492.1 171059143 6162555 complement(2674577..2674939) 1 NC_010524.1 KEGG: rfr:Rfer_1396 hypothetical protein; hypothetical protein 2674939 6162555 Lcho_2462 Leptothrix cholodnii SP-6 hypothetical protein YP_001791492.1 2674577 R 395495 CDS YP_001791493.1 171059144 6162556 complement(2675065..2675523) 1 NC_010524.1 KEGG: pna:Pnap_3141 hypothetical protein; hypothetical protein 2675523 6162556 Lcho_2463 Leptothrix cholodnii SP-6 hypothetical protein YP_001791493.1 2675065 R 395495 CDS YP_001791494.1 171059145 6162557 complement(2675558..2677408) 1 NC_010524.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: pna:Pnap_3140 AAA ATPase, central domain protein; ATPase central domain-containing protein 2677408 6162557 Lcho_2464 Leptothrix cholodnii SP-6 ATPase central domain-containing protein YP_001791494.1 2675558 R 395495 CDS YP_001791495.1 171059146 6162558 complement(2677422..2678132) 1 NC_010524.1 PFAM: PspA/IM30 family protein; KEGG: pna:Pnap_3139 phage shock protein A, PspA; phage shock protein A 2678132 6162558 Lcho_2465 Leptothrix cholodnii SP-6 phage shock protein A YP_001791495.1 2677422 R 395495 CDS YP_001791496.1 171059147 6162559 complement(2678191..2679069) 1 NC_010524.1 KEGG: pna:Pnap_3138 hypothetical protein; hypothetical protein 2679069 6162559 Lcho_2466 Leptothrix cholodnii SP-6 hypothetical protein YP_001791496.1 2678191 R 395495 CDS YP_001791497.1 171059148 6162560 complement(2679071..2680642) 1 NC_010524.1 PFAM: Peptidoglycan-binding domain 1 protein; extracellular solute-binding protein family 1; KEGG: pna:Pnap_3137 extracellular solute-binding protein, family 1; extracellular solute-binding protein 2680642 6162560 Lcho_2467 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001791497.1 2679071 R 395495 CDS YP_001791498.1 171059149 6162561 complement(2680678..2681163) 1 NC_010524.1 KEGG: pna:Pnap_3136 hypothetical protein; hypothetical protein 2681163 6162561 Lcho_2468 Leptothrix cholodnii SP-6 hypothetical protein YP_001791498.1 2680678 R 395495 CDS YP_001791499.1 171059150 6161868 complement(2681168..2681830) 1 NC_010524.1 KEGG: pna:Pnap_3135 putative methyl-accepting chemotaxis sensory transducer; putative methyl-accepting chemotaxis sensory transducer 2681830 6161868 Lcho_2469 Leptothrix cholodnii SP-6 putative methyl-accepting chemotaxis sensory transducer YP_001791499.1 2681168 R 395495 CDS YP_001791500.1 171059151 6161869 complement(2681950..2684109) 1 NC_010524.1 KEGG: azo:azo2712 GGDEF/PAS/PAC-domain containing protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 2684109 6161869 Lcho_2470 Leptothrix cholodnii SP-6 PAS/PAC sensor-containing diguanylate cyclase YP_001791500.1 2681950 R 395495 CDS YP_001791501.1 171059152 6161870 2684299..2689392 1 NC_010524.1 PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: bpt:Bpet2661 hypothetical protein; alpha-2-macroglobulin domain-containing protein 2689392 6161870 Lcho_2471 Leptothrix cholodnii SP-6 alpha-2-macroglobulin domain-containing protein YP_001791501.1 2684299 D 395495 CDS YP_001791502.1 171059153 6161871 2689389..2691788 1 NC_010524.1 TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: bbr:BB2019 penicillin-binding protein; penicillin-binding protein 1C 2691788 6161871 Lcho_2472 Leptothrix cholodnii SP-6 penicillin-binding protein 1C YP_001791502.1 2689389 D 395495 CDS YP_001791503.1 171059154 6161872 complement(2691834..2693030) 1 NC_010524.1 PFAM: cobalamin B12-binding domain protein; KEGG: scl:sce4024 putative cobalamin binding protein; cobalamin B12-binding domain-containing protein 2693030 6161872 Lcho_2473 Leptothrix cholodnii SP-6 cobalamin B12-binding domain-containing protein YP_001791503.1 2691834 R 395495 CDS YP_001791504.1 171059155 6161873 complement(2693194..2694534) 1 NC_010524.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding 8 domain protein; Ferric reductase domain protein transmembrane component domain; KEGG: mag:amb3335 predicted ferric reductase; ferric reductase domain-containing protein 2694534 6161873 Lcho_2474 Leptothrix cholodnii SP-6 ferric reductase domain-containing protein YP_001791504.1 2693194 R 395495 CDS YP_001791505.1 171059156 6161874 2694687..2696105 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: psb:Psyr_2867 ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal; histidine kinase 2696105 6161874 Lcho_2475 Leptothrix cholodnii SP-6 histidine kinase YP_001791505.1 2694687 D 395495 CDS YP_001791506.1 171059157 6160462 2696102..2696827 1 NC_010524.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: psb:Psyr_2868 response regulator receiver:transcriptional regulatory protein, C-terminal; two component transcriptional regulator 2696827 6160462 Lcho_2476 Leptothrix cholodnii SP-6 two component transcriptional regulator YP_001791506.1 2696102 D 395495 CDS YP_001791507.1 171059158 6160463 complement(2696875..2697852) 1 NC_010524.1 PFAM: PfkB domain protein; KEGG: pde:Pden_5059 PfkB domain protein; ribokinase-like domain-containing protein 2697852 6160463 Lcho_2477 Leptothrix cholodnii SP-6 ribokinase-like domain-containing protein YP_001791507.1 2696875 R 395495 CDS YP_001791508.1 171059159 6160464 2697989..2698867 1 NC_010524.1 KEGG: dar:Daro_2806 hypothetical protein; hypothetical protein 2698867 6160464 Lcho_2478 Leptothrix cholodnii SP-6 hypothetical protein YP_001791508.1 2697989 D 395495 CDS YP_001791509.1 171059160 6160465 complement(2698768..2700084) 1 NC_010524.1 KEGG: acr:Acry_2734 glucose/sorbosone dehydrogenase-like protein; glucose/sorbosone dehydrogenase-like protein 2700084 6160465 Lcho_2479 Leptothrix cholodnii SP-6 glucose/sorbosone dehydrogenase-like protein YP_001791509.1 2698768 R 395495 CDS YP_001791510.1 171059161 6160466 2700285..2702825 1 NC_010524.1 KEGG: dar:Daro_1441 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase 2702825 6160466 Lcho_2480 Leptothrix cholodnii SP-6 PAS/PAC sensor hybrid histidine kinase YP_001791510.1 2700285 D 395495 CDS YP_001791511.1 171059162 6160467 2702835..2703185 1 NC_010524.1 hypothetical protein 2703185 6160467 Lcho_2481 Leptothrix cholodnii SP-6 hypothetical protein YP_001791511.1 2702835 D 395495 CDS YP_001791512.1 171059163 6160468 complement(2703221..2704678) 1 NC_010524.1 KEGG: lme:LEUM_1946 trypsin-like serine protease with PDZ domain; hypothetical protein 2704678 6160468 Lcho_2482 Leptothrix cholodnii SP-6 hypothetical protein YP_001791512.1 2703221 R 395495 CDS YP_001791513.1 171059164 6160645 complement(2704675..2705424) 1 NC_010524.1 hypothetical protein 2705424 6160645 Lcho_2483 Leptothrix cholodnii SP-6 hypothetical protein YP_001791513.1 2704675 R 395495 CDS YP_001791514.1 171059165 6160646 complement(2705479..2707080) 1 NC_010524.1 KEGG: pol:Bpro_3104 galactarate dehydratase; TIGRFAM: galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; galactarate dehydratase 2707080 6160646 Lcho_2484 Leptothrix cholodnii SP-6 galactarate dehydratase YP_001791514.1 2705479 R 395495 CDS YP_001791515.1 171059166 6160647 2707337..2708299 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_B4644 hypothetical protein; hypothetical protein 2708299 6160647 Lcho_2485 Leptothrix cholodnii SP-6 hypothetical protein YP_001791515.1 2707337 D 395495 CDS YP_001791516.1 171059167 6160648 2708431..2709834 1 NC_010524.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: tbd:Tbd_0095 metallo-beta-lactamase superfamily protein; beta-lactamase domain-containing protein 2709834 6160648 Lcho_2486 Leptothrix cholodnii SP-6 beta-lactamase domain-containing protein YP_001791516.1 2708431 D 395495 CDS YP_001791517.1 171059168 6160649 2709913..2710899 1 NC_010524.1 PFAM: GTP-binding protein HSR1-related; KEGG: rfr:Rfer_1388 GTP-binding; GTP-binding protein HSR1-like 2710899 6160649 Lcho_2487 Leptothrix cholodnii SP-6 GTP-binding protein HSR1-like YP_001791517.1 2709913 D 395495 CDS YP_001791518.1 171059169 6160650 2711413..2712894 1 NC_010524.1 KEGG: sus:Acid_3833 hypothetical protein; hypothetical protein 2712894 6160650 Lcho_2488 Leptothrix cholodnii SP-6 hypothetical protein YP_001791518.1 2711413 D 395495 CDS YP_001791519.1 171059170 6160651 complement(2712977..2713597) 1 NC_010524.1 PFAM: GTP cyclohydrolase II; KEGG: reu:Reut_B4241 GTP cyclohydrolase II; GTP cyclohydrolase II 2713597 6160651 Lcho_2489 Leptothrix cholodnii SP-6 GTP cyclohydrolase II YP_001791519.1 2712977 R 395495 CDS YP_001791520.1 171059171 6160983 2713824..2714486 1 NC_010524.1 KEGG: rru:Rru_A1472 acetate CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 2714486 6160983 Lcho_2490 Leptothrix cholodnii SP-6 3-oxoacid CoA-transferase subunit A YP_001791520.1 2713824 D 395495 CDS YP_001791521.1 171059172 6160984 2714479..2715138 1 NC_010524.1 KEGG: rpc:RPC_2004 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 2715138 6160984 Lcho_2491 Leptothrix cholodnii SP-6 3-oxoacid CoA-transferase subunit B YP_001791521.1 2714479 D 395495 CDS YP_001791522.1 171059173 6160985 2715226..2716071 1 NC_010524.1 KEGG: aav:Aave_3997 hypothetical protein; hypothetical protein 2716071 6160985 Lcho_2492 Leptothrix cholodnii SP-6 hypothetical protein YP_001791522.1 2715226 D 395495 CDS YP_001791523.1 171059174 6160986 2716068..2716592 1 NC_010524.1 KEGG: ajs:Ajs_1688 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) 2716592 6160986 Lcho_2493 Leptothrix cholodnii SP-6 NAD(P)H dehydrogenase (quinone) YP_001791523.1 2716068 D 395495 CDS YP_001791524.1 171059175 6160987 complement(2716597..2717061) 1 NC_010524.1 hypothetical protein 2717061 6160987 Lcho_2494 Leptothrix cholodnii SP-6 hypothetical protein YP_001791524.1 2716597 R 395495 CDS YP_001791525.1 171059176 6160988 complement(2717137..2717373) 1 NC_010524.1 hypothetical protein 2717373 6160988 Lcho_2495 Leptothrix cholodnii SP-6 hypothetical protein YP_001791525.1 2717137 R 395495 CDS YP_001791526.1 171059177 6160989 complement(2717456..2718373) 1 NC_010524.1 Catalyzes the formation of PRPP from ATP and ribose 5-phosphate; phosphoribosylpyrophosphate synthetase 2718373 6160989 Lcho_2496 Leptothrix cholodnii SP-6 phosphoribosylpyrophosphate synthetase YP_001791526.1 2717456 R 395495 CDS YP_001791527.1 171059178 6160676 complement(2718370..2719899) 1 NC_010524.1 catalyzes the formation of thymine and 2-deoxy-alpha-D-ribose 1-phosphate from thymidine; thymidine phosphorylase 2719899 6160676 Lcho_2497 Leptothrix cholodnii SP-6 thymidine phosphorylase YP_001791527.1 2718370 R 395495 CDS YP_001791528.1 171059179 6160677 complement(2719936..2720721) 1 NC_010524.1 KEGG: mpt:Mpe_A1032 general secretion pathway protein B; general secretion pathway protein B 2720721 6160677 Lcho_2498 Leptothrix cholodnii SP-6 general secretion pathway protein B YP_001791528.1 2719936 R 395495 CDS YP_001791529.1 171059180 6160678 complement(2720725..2722413) 1 NC_010524.1 PFAM: Peptidoglycan-binding domain 1 protein; SMART: AAA ATPase; KEGG: mpt:Mpe_A1031 general secretion pathway protein A; peptidoglycan-binding domain-containing protein 2722413 6160678 Lcho_2499 Leptothrix cholodnii SP-6 peptidoglycan-binding domain-containing protein YP_001791529.1 2720725 R 395495 CDS YP_001791530.1 171059181 6160679 2722662..2722970 1 NC_010524.1 PFAM: protein of unknown function DUF485; KEGG: pnu:Pnuc_0534 protein of unknown function DUF485; hypothetical protein 2722970 6160679 Lcho_2500 Leptothrix cholodnii SP-6 hypothetical protein YP_001791530.1 2722662 D 395495 CDS YP_001791531.1 171059182 6160680 2722967..2724790 1 NC_010524.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: pnu:Pnuc_0535 SSS sodium solute transporter superfamily; SSS family solute/sodium (Na+) symporter 2724790 6160680 Lcho_2501 Leptothrix cholodnii SP-6 SSS family solute/sodium (Na+) symporter YP_001791531.1 2722967 D 395495 CDS YP_001791532.1 171059183 6160681 2724957..2727830 1 NC_010524.1 KEGG: dar:Daro_2754 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 2727830 6160681 Lcho_2502 Leptothrix cholodnii SP-6 multi-sensor hybrid histidine kinase YP_001791532.1 2724957 D 395495 CDS YP_001791533.1 171059184 6160682 complement(2727805..2728461) 1 NC_010524.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 2728461 6160682 Lcho_2503 Leptothrix cholodnii SP-6 DNA polymerase III subunit epsilon YP_001791533.1 2727805 R 395495 CDS YP_001791534.1 171059185 6162512 complement(2728458..2730296) 1 NC_010524.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: pna:Pnap_0480 cyclic nucleotide-binding protein; hypothetical protein 2730296 6162512 Lcho_2504 Leptothrix cholodnii SP-6 hypothetical protein YP_001791534.1 2728458 R 395495 CDS YP_001791535.1 171059186 6162513 complement(2730335..2732641) 1 NC_010524.1 KEGG: mpt:Mpe_A1812 DNA ligase (NAD+); TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase; NAD-dependent DNA ligase 2732641 6162513 Lcho_2505 Leptothrix cholodnii SP-6 NAD-dependent DNA ligase YP_001791535.1 2730335 R 395495 CDS YP_001791536.1 171059187 6162514 2732857..2733465 1 NC_010524.1 hypothetical protein 2733465 6162514 Lcho_2506 Leptothrix cholodnii SP-6 hypothetical protein YP_001791536.1 2732857 D 395495 CDS YP_001791537.1 171059188 6162515 complement(2733490..2734533) 1 NC_010524.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 2734533 6162515 Lcho_2507 Leptothrix cholodnii SP-6 ribosomal RNA large subunit methyltransferase N YP_001791537.1 2733490 R 395495 CDS YP_001791538.1 171059189 6162516 2734659..2736554 1 NC_010524.1 KEGG: mpt:Mpe_A1948 hypothetical protein; hypothetical protein 2736554 6162516 Lcho_2508 Leptothrix cholodnii SP-6 hypothetical protein YP_001791538.1 2734659 D 395495 CDS YP_001791539.1 171059190 6162517 complement(2736586..2737083) 1 NC_010524.1 KEGG: cvi:CV_1325 probable thiol-disulfide isomerase and thioredoxin; putative thiol-disulfide isomerase and thioredoxin 2737083 6162517 Lcho_2509 Leptothrix cholodnii SP-6 putative thiol-disulfide isomerase and thioredoxin YP_001791539.1 2736586 R 395495 CDS YP_001791540.1 171059191 6162518 complement(2737168..2739534) 1 NC_010524.1 SMART: helicase c2; KEGG: mpt:Mpe_A0909 hypothetical protein; helicase c2 2739534 6162518 Lcho_2510 Leptothrix cholodnii SP-6 helicase c2 YP_001791540.1 2737168 R 395495 CDS YP_001791541.1 171059192 6161464 complement(2739540..2740289) 1 NC_010524.1 PFAM: beta-lactamase domain protein; KEGG: eba:ebA2905 hypothetical protein; beta-lactamase domain-containing protein 2740289 6161464 Lcho_2511 Leptothrix cholodnii SP-6 beta-lactamase domain-containing protein YP_001791541.1 2739540 R 395495 CDS YP_001791542.1 171059193 6161465 2740388..2740891 1 NC_010524.1 PFAM: thioesterase superfamily protein; KEGG: pna:Pnap_1695 thioesterase superfamily protein; thioesterase superfamily protein 2740891 6161465 Lcho_2512 Leptothrix cholodnii SP-6 thioesterase superfamily protein YP_001791542.1 2740388 D 395495 CDS YP_001791543.1 171059194 6161466 complement(2740914..2742026) 1 NC_010524.1 SMART: ZipA FtsZ-binding region; KEGG: mpt:Mpe_A1811 hypothetical protein; ZipA FtsZ-binding region 2742026 6161466 Lcho_2513 Leptothrix cholodnii SP-6 ZipA FtsZ-binding region YP_001791543.1 2740914 R 395495 CDS YP_001791544.1 171059195 6161467 complement(2742085..2745597) 1 NC_010524.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: mpt:Mpe_A1810 putative chromosome partition protein; chromosome segregation protein SMC 2745597 6161467 Lcho_2514 Leptothrix cholodnii SP-6 chromosome segregation protein SMC YP_001791544.1 2742085 R 395495 CDS YP_001791545.1 171059196 6161468 2745658..2746881 1 NC_010524.1 catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase 2746881 6161468 Lcho_2515 Leptothrix cholodnii SP-6 succinyldiaminopimelate transaminase YP_001791545.1 2745658 D 395495 CDS YP_001791546.1 171059197 6161469 2746932..2747756 1 NC_010524.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 2747756 dapD 6161469 dapD Leptothrix cholodnii SP-6 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_001791546.1 2746932 D 395495 CDS YP_001791547.1 171059198 6161470 2747788..2749002 1 NC_010524.1 KEGG: mpt:Mpe_A1805 hypothetical protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein 2749002 6161470 Lcho_2517 Leptothrix cholodnii SP-6 twitching motility protein YP_001791547.1 2747788 D 395495 CDS YP_001791548.1 171059199 6161483 2749050..2750198 1 NC_010524.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2750198 6161483 Lcho_2518 Leptothrix cholodnii SP-6 succinyl-diaminopimelate desuccinylase YP_001791548.1 2749050 D 395495 CDS YP_001791549.1 171059200 6161484 2750195..2751154 1 NC_010524.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2751154 6161484 Lcho_2519 Leptothrix cholodnii SP-6 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_001791549.1 2750195 D 395495 CDS YP_001791550.1 171059201 6161485 2751253..2751444 1 NC_010524.1 KEGG: mpt:Mpe_A0440 hypothetical protein; hypothetical protein 2751444 6161485 Lcho_2520 Leptothrix cholodnii SP-6 hypothetical protein YP_001791550.1 2751253 D 395495 CDS YP_001791551.1 171059202 6161486 complement(2751508..2752620) 1 NC_010524.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 2752620 6161486 Lcho_2521 Leptothrix cholodnii SP-6 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001791551.1 2751508 R 395495 CDS YP_001791552.1 171059203 6161487 2752732..2752956 1 NC_010524.1 PFAM: RNA-binding S4 domain protein; KEGG: bmu:Bmul_2211 hypothetical protein; RNA-binding S4 domain-containing protein 2752956 6161487 Lcho_2522 Leptothrix cholodnii SP-6 RNA-binding S4 domain-containing protein YP_001791552.1 2752732 D 395495 CDS YP_001791553.1 171059204 6161488 2753100..2754101 1 NC_010524.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: mpt:Mpe_A2192 hypothetical protein; import inner membrane translocase subunit Tim44 2754101 6161488 Lcho_2523 Leptothrix cholodnii SP-6 import inner membrane translocase subunit Tim44 YP_001791553.1 2753100 D 395495 CDS YP_001791554.1 171059205 6161489 2754269..2754556 1 NC_010524.1 hypothetical protein 2754556 6161489 Lcho_2524 Leptothrix cholodnii SP-6 hypothetical protein YP_001791554.1 2754269 D 395495 CDS YP_001791555.1 171059206 6163980 2754556..2754957 1 NC_010524.1 hypothetical protein 2754957 6163980 Lcho_2525 Leptothrix cholodnii SP-6 hypothetical protein YP_001791555.1 2754556 D 395495 CDS YP_001791556.1 171059207 6163981 2755096..2755914 1 NC_010524.1 PFAM: MscS Mechanosensitive ion channel; KEGG: mpt:Mpe_A0411 putative transmembrane protein; mechanosensitive ion channel protein MscS 2755914 6163981 Lcho_2526 Leptothrix cholodnii SP-6 mechanosensitive ion channel protein MscS YP_001791556.1 2755096 D 395495 CDS YP_001791557.1 171059208 6163982 2756282..2757790 1 NC_010524.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mfa:Mfla_1258 DEAD/DEAH box helicase-like protein; DEAD/DEAH box helicase 2757790 6163982 Lcho_2527 Leptothrix cholodnii SP-6 DEAD/DEAH box helicase YP_001791557.1 2756282 D 395495 CDS YP_001791558.1 171059209 6163983 complement(2757873..2759300) 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pna:Pnap_2739 integral membrane sensor signal transduction histidine kinase; histidine kinase 2759300 6163983 Lcho_2528 Leptothrix cholodnii SP-6 histidine kinase YP_001791558.1 2757873 R 395495 CDS YP_001791559.1 171059210 6163984 complement(2759328..2760026) 1 NC_010524.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pna:Pnap_2740 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2760026 6163984 Lcho_2529 Leptothrix cholodnii SP-6 two component transcriptional regulator YP_001791559.1 2759328 R 395495 CDS YP_001791560.1 171059211 6163985 complement(2760101..2760649) 1 NC_010524.1 KEGG: pna:Pnap_2741 hypothetical protein; hypothetical protein 2760649 6163985 Lcho_2530 Leptothrix cholodnii SP-6 hypothetical protein YP_001791560.1 2760101 R 395495 CDS YP_001791561.1 171059212 6163986 complement(2760784..2761401) 1 NC_010524.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: asa:ASA_2813 phosphatidylglycerophosphate synthase; CDP-alcohol phosphatidyltransferase 2761401 6163986 Lcho_2531 Leptothrix cholodnii SP-6 CDP-alcohol phosphatidyltransferase YP_001791561.1 2760784 R 395495 CDS YP_001791562.1 171059213 6163163 complement(2761394..2762257) 1 NC_010524.1 KEGG: mpt:Mpe_A2958 hypothetical protein; hypothetical protein 2762257 6163163 Lcho_2532 Leptothrix cholodnii SP-6 hypothetical protein YP_001791562.1 2761394 R 395495 CDS YP_001791563.1 171059214 6163164 complement(2762254..2763183) 1 NC_010524.1 PFAM: protein of unknown function DUF692; KEGG: mpt:Mpe_A2959 hypothetical protein; hypothetical protein 2763183 6163164 Lcho_2533 Leptothrix cholodnii SP-6 hypothetical protein YP_001791563.1 2762254 R 395495 CDS YP_001791564.1 171059215 6163165 complement(2763208..2763495) 1 NC_010524.1 KEGG: mpt:Mpe_A2960 putative signal peptide protein; putative signal peptide protein 2763495 6163165 Lcho_2534 Leptothrix cholodnii SP-6 putative signal peptide protein YP_001791564.1 2763208 R 395495 CDS YP_001791565.1 171059216 6163166 2763640..2764209 1 NC_010524.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 2764209 6163166 Lcho_2535 Leptothrix cholodnii SP-6 RNA polymerase sigma factor YP_001791565.1 2763640 D 395495 CDS YP_001791566.1 171059217 6163167 2764215..2764409 1 NC_010524.1 KEGG: pol:Bpro_4893 hypothetical protein; hypothetical protein 2764409 6163167 Lcho_2536 Leptothrix cholodnii SP-6 hypothetical protein YP_001791566.1 2764215 D 395495 CDS YP_001791567.1 171059218 6163168 complement(2764414..2765370) 1 NC_010524.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: ajs:Ajs_2807 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 2765370 6163168 Lcho_2537 Leptothrix cholodnii SP-6 2-nitropropane dioxygenase YP_001791567.1 2764414 R 395495 CDS YP_001791568.1 171059219 6163169 complement(2765370..2767160) 1 NC_010524.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_2808 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 2767160 6163169 Lcho_2538 Leptothrix cholodnii SP-6 acyl-CoA dehydrogenase domain-containing protein YP_001791568.1 2765370 R 395495 CDS YP_001791569.1 171059220 6162549 complement(2767281..2768207) 1 NC_010524.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: mpt:Mpe_A1297 electron transfer flavoprotein alpha-subunit; electron transfer flavoprotein subunit alpha 2768207 6162549 Lcho_2539 Leptothrix cholodnii SP-6 electron transfer flavoprotein subunit alpha YP_001791569.1 2767281 R 395495 CDS YP_001791570.1 171059221 6162550 complement(2768210..2768959) 1 NC_010524.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dac:Daci_2390 electron transfer flavoprotein alpha/beta-subunit; electron transfer flavoprotein alpha/beta-subunit 2768959 6162550 Lcho_2540 Leptothrix cholodnii SP-6 electron transfer flavoprotein alpha/beta-subunit YP_001791570.1 2768210 R 395495 CDS YP_001791571.1 171059222 6162551 2769149..2769967 1 NC_010524.1 KEGG: mpt:Mpe_A1295 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase 2769967 6162551 Lcho_2541 Leptothrix cholodnii SP-6 glutamate racemase YP_001791571.1 2769149 D 395495 CDS YP_001791572.1 171059223 6162503 complement(2770631..2773048) 1 NC_010524.1 KEGG: mpt:Mpe_A1294 endopeptidase La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La 2773048 6162503 Lcho_2542 Leptothrix cholodnii SP-6 ATP-dependent protease La YP_001791572.1 2770631 R 395495 CDS YP_001791573.1 171059224 6162504 complement(2773167..2774441) 1 NC_010524.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2774441 clpX 6162504 clpX Leptothrix cholodnii SP-6 ATP-dependent protease ATP-binding subunit ClpX YP_001791573.1 2773167 R 395495 CDS YP_001791574.1 171059225 6162165 complement(2774480..2775088) 1 NC_010524.1 KEGG: vei:Veis_4371 ATP-dependent Clp protease, proteolytic subunit ClpP; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP 2775088 6162165 Lcho_2544 Leptothrix cholodnii SP-6 ATP-dependent Clp protease, proteolytic subunit ClpP YP_001791574.1 2774480 R 395495 CDS YP_001791575.1 171059226 6162166 complement(2775259..2776566) 1 NC_010524.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2776566 tig 6162166 tig Leptothrix cholodnii SP-6 trigger factor YP_001791575.1 2775259 R 395495 CDS YP_001791576.1 171059227 6162168 complement(2776835..2779978) 1 NC_010524.1 PFAM: acriflavin resistance protein; KEGG: mpt:Mpe_A1290 putative transmembrane drug efflux protein; acriflavin resistance protein 2779978 6162168 Lcho_2546 Leptothrix cholodnii SP-6 acriflavin resistance protein YP_001791576.1 2776835 R 395495 CDS YP_001791577.1 171059228 6162169 complement(2780010..2781191) 1 NC_010524.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: mpt:Mpe_A1289 putative transport/efflux transmembrane protein; RND family efflux transporter MFP subunit 2781191 6162169 Lcho_2547 Leptothrix cholodnii SP-6 RND family efflux transporter MFP subunit YP_001791577.1 2780010 R 395495 CDS YP_001791578.1 171059229 6162170 2781333..2782163 1 NC_010524.1 TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; KEGG: mpt:Mpe_A1288 putative terpenoid synthase-related protein; squalene synthase 2782163 6162170 Lcho_2548 Leptothrix cholodnii SP-6 squalene synthase YP_001791578.1 2781333 D 395495 CDS YP_001791579.1 171059230 6163534 2782244..2783080 1 NC_010524.1 TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: mpt:Mpe_A1287 putative phytoene synthase; squalene synthase 2783080 6163534 Lcho_2549 Leptothrix cholodnii SP-6 squalene synthase YP_001791579.1 2782244 D 395495 CDS YP_001791580.1 171059231 6163535 2783070..2784368 1 NC_010524.1 TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mpt:Mpe_A1286 putative squalene/phytoene dehydrogenase; squalene-associated FAD-dependent desaturase 2784368 6163535 Lcho_2550 Leptothrix cholodnii SP-6 squalene-associated FAD-dependent desaturase YP_001791580.1 2783070 D 395495 CDS YP_001791581.1 171059232 6163536 complement(2784828..2785409) 1 NC_010524.1 PFAM: manganese and iron superoxide dismutase; KEGG: mpt:Mpe_A2481 superoxide dismutase; superoxide dismutase 2785409 6163536 Lcho_2551 Leptothrix cholodnii SP-6 superoxide dismutase YP_001791581.1 2784828 R 395495 CDS YP_001791582.1 171059233 6163537 complement(2785561..2786859) 1 NC_010524.1 KEGG: mpt:Mpe_A2482 exodeoxyribonuclease VII; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit 2786859 6163537 Lcho_2552 Leptothrix cholodnii SP-6 exodeoxyribonuclease VII large subunit YP_001791582.1 2785561 R 395495 CDS YP_001791583.1 171059234 6163538 2787315..2787893 1 NC_010524.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mpt:Mpe_A2483 putative biopolymer transport ExbB-like transmembrane protein; MotA/TolQ/ExbB proton channel 2787893 6163538 Lcho_2553 Leptothrix cholodnii SP-6 MotA/TolQ/ExbB proton channel YP_001791583.1 2787315 D 395495 CDS YP_001791584.1 171059235 6163539 2787890..2788315 1 NC_010524.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mpt:Mpe_A2484 putative biopolymer transport ExbD-related transmembrane protein; biopolymer transport protein ExbD/TolR 2788315 6163539 Lcho_2554 Leptothrix cholodnii SP-6 biopolymer transport protein ExbD/TolR YP_001791584.1 2787890 D 395495 CDS YP_001791585.1 171059236 6163540 2788312..2789358 1 NC_010524.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 2789358 lpxK 6163540 lpxK Leptothrix cholodnii SP-6 tetraacyldisaccharide 4'-kinase YP_001791585.1 2788312 D 395495 CDS YP_001791586.1 171059237 6163156 2789410..2789613 1 NC_010524.1 PFAM: protein of unknown function DUF343; KEGG: mpt:Mpe_A2486 hypothetical protein; hypothetical protein 2789613 6163156 Lcho_2556 Leptothrix cholodnii SP-6 hypothetical protein YP_001791586.1 2789410 D 395495 CDS YP_001791587.1 171059238 6163157 2789610..2790425 1 NC_010524.1 KEGG: mpt:Mpe_A2487 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase 2790425 6163157 Lcho_2557 Leptothrix cholodnii SP-6 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_001791587.1 2789610 D 395495 CDS YP_001791588.1 171059239 6163158 2790611..2791264 1 NC_010524.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 2791264 adk 6163158 adk Leptothrix cholodnii SP-6 adenylate kinase YP_001791588.1 2790611 D 395495 CDS YP_001791589.1 171059240 6163159 2791420..2792178 1 NC_010524.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mpt:Mpe_A2489 putative short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2792178 6163159 Lcho_2559 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001791589.1 2791420 D 395495 CDS YP_001791590.1 171059241 6163160 2792237..2794036 1 NC_010524.1 PFAM: gamma-glutamyltranspeptidase; KEGG: ajs:Ajs_1042 gamma-glutamyltransferase; gamma-glutamyltransferase 2794036 6163160 Lcho_2560 Leptothrix cholodnii SP-6 gamma-glutamyltransferase YP_001791590.1 2792237 D 395495 CDS YP_001791591.1 171059242 6163161 2794080..2795876 1 NC_010524.1 KEGG: mpt:Mpe_A2490 putative DNA primase protein; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein; DNA primase 2795876 6163161 Lcho_2561 Leptothrix cholodnii SP-6 DNA primase YP_001791591.1 2794080 D 395495 CDS YP_001791592.1 171059243 6163162 2796202..2798466 1 NC_010524.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 non-essential domain protein; sigma-70 region 1.2; KEGG: mpt:Mpe_A2491 putative RNA polymerase sigma(sigma-70) factor transcription regulator protein; RNA polymerase sigma-70 subunit RpoD 2798466 6163162 Lcho_2562 Leptothrix cholodnii SP-6 RNA polymerase sigma-70 subunit RpoD YP_001791592.1 2796202 D 395495 CDS YP_001791593.1 171059244 6162982 2798595..2799527 1 NC_010524.1 PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mpt:Mpe_A2492 adenylate cyclase family 3-like protein; adenylate/guanylate cyclase 2799527 6162982 Lcho_2563 Leptothrix cholodnii SP-6 adenylate/guanylate cyclase YP_001791593.1 2798595 D 395495 CDS YP_001791594.1 171059245 6162983 complement(2799546..2800241) 1 NC_010524.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mpt:Mpe_A2493 hydrolase; HAD family hydrolase 2800241 6162983 Lcho_2564 Leptothrix cholodnii SP-6 HAD family hydrolase YP_001791594.1 2799546 R 395495 CDS YP_001791595.1 171059246 6162984 2800311..2801417 1 NC_010524.1 PFAM: ferrochelatase; KEGG: mpt:Mpe_A2495 ferrochelatase; ferrochelatase 2801417 6162984 Lcho_2565 Leptothrix cholodnii SP-6 ferrochelatase YP_001791595.1 2800311 D 395495 CDS YP_001791596.1 171059247 6162985 complement(2801463..2802386) 1 NC_010524.1 PFAM: porin Gram-negative type; KEGG: ajs:Ajs_0134 porin, gram-negative type; porin 2802386 6162985 Lcho_2566 Leptothrix cholodnii SP-6 porin YP_001791596.1 2801463 R 395495 CDS YP_001791597.1 171059248 6162986 complement(2802569..2804056) 1 NC_010524.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: aav:Aave_3009 protein of unknown function DUF112, transmembrane; hypothetical protein 2804056 6162986 Lcho_2567 Leptothrix cholodnii SP-6 hypothetical protein YP_001791597.1 2802569 R 395495 CDS YP_001791598.1 171059249 6162987 complement(2804056..2804550) 1 NC_010524.1 KEGG: pna:Pnap_1235 hypothetical protein; hypothetical protein 2804550 6162987 Lcho_2568 Leptothrix cholodnii SP-6 hypothetical protein YP_001791598.1 2804056 R 395495 CDS YP_001791599.1 171059250 6162988 complement(2804552..2805511) 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_2009 uncharacterized protein UPF0065; hypothetical protein 2805511 6162988 Lcho_2569 Leptothrix cholodnii SP-6 hypothetical protein YP_001791599.1 2804552 R 395495 CDS YP_001791600.1 171059251 6162505 2805636..2806304 1 NC_010524.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_2008 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2806304 6162505 Lcho_2570 Leptothrix cholodnii SP-6 two component transcriptional regulator YP_001791600.1 2805636 D 395495 CDS YP_001791601.1 171059252 6162506 2806319..2807788 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: pna:Pnap_1232 integral membrane sensor signal transduction histidine kinase; histidine kinase 2807788 6162506 Lcho_2571 Leptothrix cholodnii SP-6 histidine kinase YP_001791601.1 2806319 D 395495 CDS YP_001791602.1 171059253 6162507 2807785..2808246 1 NC_010524.1 PFAM: RNA-binding S4 domain protein; KEGG: aav:Aave_2419 RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 2808246 6162507 Lcho_2572 Leptothrix cholodnii SP-6 RNA-binding S4 domain-containing protein YP_001791602.1 2807785 D 395495 CDS YP_001791603.1 171059254 6162508 complement(2808293..2809864) 1 NC_010524.1 KEGG: rfr:Rfer_1228 hypothetical protein; hypothetical protein 2809864 6162508 Lcho_2573 Leptothrix cholodnii SP-6 hypothetical protein YP_001791603.1 2808293 R 395495 CDS YP_001791604.1 171059255 6162509 complement(2809913..2810812) 1 NC_010524.1 KEGG: rfr:Rfer_1584 hypothetical protein; hypothetical protein 2810812 6162509 Lcho_2574 Leptothrix cholodnii SP-6 hypothetical protein YP_001791604.1 2809913 R 395495 CDS YP_001791605.1 171059256 6162510 2811002..2811547 1 NC_010524.1 PFAM: GrpE protein; KEGG: mpt:Mpe_A2497 putative heat shock protein; GrpE protein HSP-70 cofactor 2811547 6162510 Lcho_2575 Leptothrix cholodnii SP-6 GrpE protein HSP-70 cofactor YP_001791605.1 2811002 D 395495 CDS YP_001791606.1 171059257 6162511 2811673..2813613 1 NC_010524.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 2813613 dnaK 6162511 dnaK Leptothrix cholodnii SP-6 molecular chaperone DnaK YP_001791606.1 2811673 D 395495 CDS YP_001791607.1 171059258 6162254 2813742..2814899 1 NC_010524.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 2814899 6162254 Lcho_2577 Leptothrix cholodnii SP-6 chaperone protein DnaJ YP_001791607.1 2813742 D 395495 CDS YP_001791608.1 171059259 6162255 2815038..2816771 1 NC_010524.1 PFAM: response regulator receiver; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; KEGG: rfr:Rfer_1420 response regulator receiver domain protein; response regulator receiver protein 2816771 6162255 Lcho_2578 Leptothrix cholodnii SP-6 response regulator receiver protein YP_001791608.1 2815038 D 395495 CDS YP_001791609.1 171059260 6162256 complement(2816708..2817985) 1 NC_010524.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pau:PA14_05820 putative acyl-CoA transferase; L-carnitine dehydratase/bile acid-inducible protein F 2817985 6162256 Lcho_2579 Leptothrix cholodnii SP-6 L-carnitine dehydratase/bile acid-inducible protein F YP_001791609.1 2816708 R 395495 CDS YP_001791610.1 171059261 6162257 2818194..2819198 1 NC_010524.1 PFAM: extracellular solute-binding protein family 3; KEGG: azo:azo2228 conserved hypothetical amino acid-binding protein; extracellular solute-binding protein 2819198 6162257 Lcho_2580 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001791610.1 2818194 D 395495 CDS YP_001791611.1 171059262 6162258 2819195..2822395 1 NC_010524.1 KEGG: azo:azo2227 GGDEF/EAL/PAS-domain containing protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2822395 6162258 Lcho_2581 Leptothrix cholodnii SP-6 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001791611.1 2819195 D 395495 CDS YP_001791612.1 171059263 6162259 2822441..2823337 1 NC_010524.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: mpt:Mpe_A2756 hypothetical protein; phosphotransferase domain-containing protein 2823337 6162259 Lcho_2582 Leptothrix cholodnii SP-6 phosphotransferase domain-containing protein YP_001791612.1 2822441 D 395495 CDS YP_001791613.1 171059264 6162260 2823375..2824307 1 NC_010524.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pol:Bpro_1004 putative transmembrane protein; hypothetical protein 2824307 6162260 Lcho_2583 Leptothrix cholodnii SP-6 hypothetical protein YP_001791613.1 2823375 D 395495 CDS YP_001791614.1 171059265 6163070 2824376..2825002 1 NC_010524.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: mpt:Mpe_A2757 hypothetical protein; Sua5/YciO/YrdC/YwlC family protein 2825002 6163070 Lcho_2584 Leptothrix cholodnii SP-6 Sua5/YciO/YrdC/YwlC family protein YP_001791614.1 2824376 D 395495 CDS YP_001791615.1 171059266 6163071 2825026..2825526 1 NC_010524.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bur:Bcep18194_A5889 hypothetical protein; ybaK/ebsC protein 2825526 6163071 Lcho_2585 Leptothrix cholodnii SP-6 ybaK/ebsC protein YP_001791615.1 2825026 D 395495 CDS YP_001791616.1 171059267 6163072 2825576..2826367 1 NC_010524.1 PFAM: protein of unknown function DUF205; KEGG: mpt:Mpe_A2760 putative transmembrane protein; hypothetical protein 2826367 6163072 Lcho_2586 Leptothrix cholodnii SP-6 hypothetical protein YP_001791616.1 2825576 D 395495 CDS YP_001791617.1 171059268 6163073 2826439..2826825 1 NC_010524.1 PFAM: glutaredoxin; glutaredoxin 2826825 6163073 Lcho_2587 Leptothrix cholodnii SP-6 glutaredoxin YP_001791617.1 2826439 D 395495 CDS YP_001791618.1 171059269 6163074 complement(2826856..2827914) 1 NC_010524.1 PFAM: aldo/keto reductase; KEGG: pna:Pnap_1076 aldo/keto reductase; aldo/keto reductase 2827914 6163074 Lcho_2588 Leptothrix cholodnii SP-6 aldo/keto reductase YP_001791618.1 2826856 R 395495 CDS YP_001791619.1 171059270 6163075 2828193..2829320 1 NC_010524.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dar:Daro_3005 response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; response regulator receiver modulated metal dependent phosphohydrolase 2829320 6163075 Lcho_2589 Leptothrix cholodnii SP-6 response regulator receiver modulated metal dependent phosphohydrolase YP_001791619.1 2828193 D 395495 CDS YP_001791620.1 171059271 6163076 2829378..2835257 1 NC_010524.1 KEGG: azo:azo2482 putative hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 2835257 6163076 Lcho_2590 Leptothrix cholodnii SP-6 multi-sensor hybrid histidine kinase YP_001791620.1 2829378 D 395495 CDS YP_001791621.1 171059272 6163558 complement(2835284..2837971) 1 NC_010524.1 PFAM: multicopper oxidase type 2; KEGG: pen:PSEEN2124 hypothetical protein; multicopper oxidase type 2 2837971 6163558 Lcho_2591 Leptothrix cholodnii SP-6 multicopper oxidase type 2 YP_001791621.1 2835284 R 395495 CDS YP_001791622.1 171059273 6163560 complement(2838693..2839889) 1 NC_010524.1 PFAM: Extracellular ligand-binding receptor; KEGG: har:HEAR0738 putative amino acid ABC transporter; extracellular ligand-binding receptor 2839889 6163560 Lcho_2592 Leptothrix cholodnii SP-6 extracellular ligand-binding receptor YP_001791622.1 2838693 R 395495 CDS YP_001791623.1 171059274 6163561 complement(2840085..2840534) 1 NC_010524.1 hypothetical protein 2840534 6163561 Lcho_2593 Leptothrix cholodnii SP-6 hypothetical protein YP_001791623.1 2840085 R 395495 CDS YP_001791624.1 171059275 6163562 complement(2840543..2840980) 1 NC_010524.1 PFAM: DNA polymerase III chi subunit HolC; KEGG: ajs:Ajs_1922 DNA polymerase III chi subunit, HolC; DNA polymerase III chi subunit HolC 2840980 6163562 Lcho_2594 Leptothrix cholodnii SP-6 DNA polymerase III chi subunit HolC YP_001791624.1 2840543 R 395495 CDS YP_001791625.1 171059276 6163563 complement(2840989..2842449) 1 NC_010524.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: mpt:Mpe_A1942 leucyl aminopeptidase; leucyl aminopeptidase 2842449 6163563 Lcho_2595 Leptothrix cholodnii SP-6 leucyl aminopeptidase YP_001791625.1 2840989 R 395495 CDS YP_001791626.1 171059277 6163509 2842477..2843571 1 NC_010524.1 PFAM: permease YjgP/YjgQ family protein; KEGG: mpt:Mpe_A1943 putative transmembrane protein; YjgP/YjgQ family permease 2843571 6163509 Lcho_2596 Leptothrix cholodnii SP-6 YjgP/YjgQ family permease YP_001791626.1 2842477 D 395495 CDS YP_001791627.1 171059278 6163510 2843584..2844690 1 NC_010524.1 PFAM: permease YjgP/YjgQ family protein; KEGG: mpt:Mpe_A1944 hypothetical protein; YjgP/YjgQ family permease 2844690 6163510 Lcho_2597 Leptothrix cholodnii SP-6 YjgP/YjgQ family permease YP_001791627.1 2843584 D 395495 CDS YP_001791628.1 171059279 6163511 2844702..2845097 1 NC_010524.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: mpt:Mpe_A1945 hypothetical protein; cobalamin (vitamin B12) biosynthesis CbiX protein 2845097 6163511 Lcho_2598 Leptothrix cholodnii SP-6 cobalamin (vitamin B12) biosynthesis CbiX protein YP_001791628.1 2844702 D 395495 CDS YP_001791629.1 171059280 6163512 2845094..2846059 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A1946 transcriptional regulator CysB-like protein; transcriptional regulator CysB-like protein 2846059 6163512 Lcho_2599 Leptothrix cholodnii SP-6 transcriptional regulator CysB-like protein YP_001791629.1 2845094 D 395495 CDS YP_001791630.1 171059281 6163513 2846104..2847294 1 NC_010524.1 PFAM: aminotransferase class I and II; KEGG: mpt:Mpe_A1947 putative pyridoxal phosphate aminotransferase protein; class I/II aminotransferase 2847294 6163513 Lcho_2600 Leptothrix cholodnii SP-6 class I/II aminotransferase YP_001791630.1 2846104 D 395495 CDS YP_001791631.1 171059282 6163514 complement(2847325..2848170) 1 NC_010524.1 hypothetical protein 2848170 6163514 Lcho_2601 Leptothrix cholodnii SP-6 hypothetical protein YP_001791631.1 2847325 R 395495 CDS YP_001791632.1 171059283 6163515 2848228..2848923 1 NC_010524.1 PFAM: Glutathione S-transferase domain; KEGG: mpt:Mpe_A1954 putative GST-related protein; glutathione S-transferase domain-containing protein 2848923 6163515 Lcho_2602 Leptothrix cholodnii SP-6 glutathione S-transferase domain-containing protein YP_001791632.1 2848228 D 395495 CDS YP_001791633.1 171059284 6162892 complement(2848924..2850177) 1 NC_010524.1 PFAM: transglutaminase domain protein; KEGG: bmu:Bmul_4112 transglutaminase domain protein; transglutaminase domain-containing protein 2850177 6162892 Lcho_2603 Leptothrix cholodnii SP-6 transglutaminase domain-containing protein YP_001791633.1 2848924 R 395495 CDS YP_001791634.1 171059285 6162893 complement(2850174..2852981) 1 NC_010524.1 PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bte:BTH_II1918 u1937b; B1937_F1_4; hypothetical protein 2852981 6162893 Lcho_2604 Leptothrix cholodnii SP-6 hypothetical protein YP_001791634.1 2850174 R 395495 CDS YP_001791635.1 171059286 6162894 complement(2853060..2856584) 1 NC_010524.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: mpt:Mpe_A2553 transglutaminase-like superfamily protein; transglutaminase domain-containing protein 2856584 6162894 Lcho_2605 Leptothrix cholodnii SP-6 transglutaminase domain-containing protein YP_001791635.1 2853060 R 395495 CDS YP_001791636.1 171059287 6162895 complement(2856691..2857650) 1 NC_010524.1 PFAM: protein of unknown function DUF403; KEGG: mpt:Mpe_A2549 hypothetical protein; hypothetical protein 2857650 6162895 Lcho_2606 Leptothrix cholodnii SP-6 hypothetical protein YP_001791636.1 2856691 R 395495 CDS YP_001791637.1 171059288 6162896 complement(2857655..2859088) 1 NC_010524.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: mpt:Mpe_A2550 hypothetical protein; hypothetical protein 2859088 6162896 Lcho_2607 Leptothrix cholodnii SP-6 hypothetical protein YP_001791637.1 2857655 R 395495 CDS YP_001791638.1 171059289 6162897 complement(2859085..2861586) 1 NC_010524.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: mpt:Mpe_A2554 putative transporter DNA uptake transmembrane protein; DNA internalization-like competence protein ComEC/Rec2 2861586 6162897 Lcho_2608 Leptothrix cholodnii SP-6 DNA internalization-like competence protein ComEC/Rec2 YP_001791638.1 2859085 R 395495 CDS YP_001791639.1 171059290 6162898 2861774..2862232 1 NC_010524.1 PFAM: Endoribonuclease L-PSP; KEGG: mpt:Mpe_A2555 hypothetical protein; endoribonuclease L-PSP 2862232 6162898 Lcho_2609 Leptothrix cholodnii SP-6 endoribonuclease L-PSP YP_001791639.1 2861774 D 395495 CDS YP_001791640.1 171059291 6162770 2862303..2862800 1 NC_010524.1 PFAM: Disulphide bond formation protein DsbB; KEGG: bbr:BB2601 disulfide bond formation protein B; disulfide bond formation protein DsbB 2862800 6162770 Lcho_2610 Leptothrix cholodnii SP-6 disulfide bond formation protein DsbB YP_001791640.1 2862303 D 395495 CDS YP_001791641.1 171059292 6162771 2863039..2863794 1 NC_010524.1 PFAM: Lytic transglycosylase catalytic; KEGG: reh:H16_A0991 putative transglycosylase; lytic transglycosylase catalytic subunit 2863794 6162771 Lcho_2611 Leptothrix cholodnii SP-6 lytic transglycosylase catalytic subunit YP_001791641.1 2863039 D 395495 CDS YP_001791642.1 171059293 6162772 2863849..2864310 1 NC_010524.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: rso:RSc2310 putative GspG-related transmembrane protein; general secretion pathway protein G 2864310 6162772 Lcho_2612 Leptothrix cholodnii SP-6 general secretion pathway protein G YP_001791642.1 2863849 D 395495 CDS YP_001791643.1 171059294 6162773 2864359..2865507 1 NC_010524.1 PFAM: type II secretion system protein; KEGG: rme:Rmet_4712 type II secretion system protein; type II secretion system protein 2865507 6162773 Lcho_2613 Leptothrix cholodnii SP-6 type II secretion system protein YP_001791643.1 2864359 D 395495 CDS YP_001791644.1 171059295 6162774 2865511..2867253 1 NC_010524.1 PFAM: type II secretion system protein E; KEGG: rme:Rmet_4711 type II secretion system protein E; type II secretion system protein E 2867253 6162774 Lcho_2614 Leptothrix cholodnii SP-6 type II secretion system protein E YP_001791644.1 2865511 D 395495 CDS YP_001791645.1 171059296 6162775 2867231..2868001 1 NC_010524.1 hypothetical protein 2868001 6162775 Lcho_2615 Leptothrix cholodnii SP-6 hypothetical protein YP_001791645.1 2867231 D 395495 CDS YP_001791646.1 171059297 6162776 2867998..2868603 1 NC_010524.1 KEGG: pfo:Pfl_1984 fimbrial assembly; fimbrial assembly 2868603 6162776 Lcho_2616 Leptothrix cholodnii SP-6 fimbrial assembly YP_001791646.1 2867998 D 395495 CDS YP_001791647.1 171059298 6162989 2868600..2869181 1 NC_010524.1 KEGG: rso:RSc2305 probable transmembrane protein; putative transmembrane protein 2869181 6162989 Lcho_2617 Leptothrix cholodnii SP-6 putative transmembrane protein YP_001791647.1 2868600 D 395495 CDS YP_001791648.1 171059299 6162990 2869237..2869830 1 NC_010524.1 KEGG: rso:RSc2304 putative proline rich transmembrane protein; hypothetical protein 2869830 6162990 Lcho_2618 Leptothrix cholodnii SP-6 hypothetical protein YP_001791648.1 2869237 D 395495 CDS YP_001791649.1 171059300 6162991 2869827..2871815 1 NC_010524.1 PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; Tetratricopeptide TPR_2 repeat protein; KEGG: rso:RSc2303 probable GspD-related protein; type II and III secretion system protein 2871815 6162991 Lcho_2619 Leptothrix cholodnii SP-6 type II and III secretion system protein YP_001791649.1 2869827 D 395495 CDS YP_001791650.1 171059301 6162992 2871835..2872314 1 NC_010524.1 KEGG: rso:RS02978 putative general secretion pathway GspG related transmembrane protein; putative general secretion pathway GspG related transmembrane protein 2872314 6162992 Lcho_2620 Leptothrix cholodnii SP-6 putative general secretion pathway GspG related transmembrane protein YP_001791650.1 2871835 D 395495 CDS YP_001791651.1 171059302 6162993 2872308..2872862 1 NC_010524.1 PFAM: type II secretion system protein G; KEGG: rme:Rmet_4704 secretory pathway pseudopilin PulG; type II secretion system protein G 2872862 6162993 Lcho_2621 Leptothrix cholodnii SP-6 type II secretion system protein G YP_001791651.1 2872308 D 395495 CDS YP_001791652.1 171059303 6162994 2872895..2873461 1 NC_010524.1 KEGG: mfa:Mfla_2411 hypothetical protein; hypothetical protein 2873461 6162994 Lcho_2622 Leptothrix cholodnii SP-6 hypothetical protein YP_001791652.1 2872895 D 395495 CDS YP_001791653.1 171059304 6162995 complement(2873350..2874909) 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pna:Pnap_1536 integral membrane sensor signal transduction histidine kinase; histidine kinase 2874909 6162995 Lcho_2623 Leptothrix cholodnii SP-6 histidine kinase YP_001791653.1 2873350 R 395495 CDS YP_001791654.1 171059305 6164007 complement(2874913..2875632) 1 NC_010524.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pna:Pnap_1535 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2875632 6164007 Lcho_2624 Leptothrix cholodnii SP-6 two component transcriptional regulator YP_001791654.1 2874913 R 395495 CDS YP_001791655.1 171059306 6164008 complement(2875853..2880562) 1 NC_010524.1 KEGG: neu:NE0315 possible multicopper oxidase; putative multicopper oxidase 2880562 6164008 Lcho_2625 Leptothrix cholodnii SP-6 putative multicopper oxidase YP_001791655.1 2875853 R 395495 CDS YP_001791656.1 171059307 6164009 2880999..2882978 1 NC_010524.1 KEGG: ppf:Pput_2282 40-residue YVTN family beta-propeller repeat protein; hypothetical protein 2882978 6164009 Lcho_2626 Leptothrix cholodnii SP-6 hypothetical protein YP_001791656.1 2880999 D 395495 CDS YP_001791657.1 171059308 6164010 2883016..2884293 1 NC_010524.1 PFAM: electron transport protein SCO1/SenC; KEGG: pfo:Pfl_1977 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 2884293 6164010 Lcho_2627 Leptothrix cholodnii SP-6 electron transport protein SCO1/SenC YP_001791657.1 2883016 D 395495 CDS YP_001791658.1 171059309 6164011 2884293..2885948 1 NC_010524.1 KEGG: pfo:Pfl_1979 cytochrome c, putative; cytochrome c 2885948 6164011 Lcho_2628 Leptothrix cholodnii SP-6 cytochrome c YP_001791658.1 2884293 D 395495 CDS YP_001791659.1 171059310 6164012 2886577..2887989 1 NC_010524.1 KEGG: ppf:Pput_2366 hypothetical protein; hypothetical protein 2887989 6164012 Lcho_2629 Leptothrix cholodnii SP-6 hypothetical protein YP_001791659.1 2886577 D 395495 CDS YP_001791660.1 171059311 6164013 2888006..2890483 1 NC_010524.1 PFAM: Fibronectin type III domain protein; KEGG: gsu:GSU1844 IPT/TIG domain protein, putative; fibronectin type III domain-containing protein 2890483 6164013 Lcho_2630 Leptothrix cholodnii SP-6 fibronectin type III domain-containing protein YP_001791660.1 2888006 D 395495 CDS YP_001791661.1 171059312 6160969 2890678..2891007 1 NC_010524.1 hypothetical protein 2891007 6160969 Lcho_2631 Leptothrix cholodnii SP-6 hypothetical protein YP_001791661.1 2890678 D 395495 CDS YP_001791662.1 171059313 6160970 complement(2891010..2893334) 1 NC_010524.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 2893334 6160970 Lcho_2632 Leptothrix cholodnii SP-6 DNA topoisomerase IV subunit A YP_001791662.1 2891010 R 395495 CDS YP_001791663.1 171059314 6160971 complement(2893408..2893935) 1 NC_010524.1 hypothetical protein 2893935 6160971 Lcho_2633 Leptothrix cholodnii SP-6 hypothetical protein YP_001791663.1 2893408 R 395495 CDS YP_001791664.1 171059315 6160972 complement(2893994..2894809) 1 NC_010524.1 PFAM: OmpA/MotB domain protein; KEGG: rpd:RPD_1877 OmpA/MotB; OmpA/MotB domain-containing protein 2894809 6160972 Lcho_2634 Leptothrix cholodnii SP-6 OmpA/MotB domain-containing protein YP_001791664.1 2893994 R 395495 CDS YP_001791665.1 171059316 6160973 complement(2895186..2897162) 1 NC_010524.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 2897162 6160973 Lcho_2635 Leptothrix cholodnii SP-6 DNA topoisomerase IV subunit B YP_001791665.1 2895186 R 395495 CDS YP_001791666.1 171059317 6160974 2897352..2898074 1 NC_010524.1 KEGG: tcx:Tcr_0046 hypothetical protein; hypothetical protein 2898074 6160974 Lcho_2636 Leptothrix cholodnii SP-6 hypothetical protein YP_001791666.1 2897352 D 395495 CDS YP_001791667.1 171059318 6160975 2898158..2899402 1 NC_010524.1 PFAM: major facilitator superfamily MFS_1; KEGG: mpt:Mpe_A2560 putative MFS transporter; major facilitator transporter 2899402 6160975 Lcho_2637 Leptothrix cholodnii SP-6 major facilitator transporter YP_001791667.1 2898158 D 395495 CDS YP_001791668.1 171059319 6160917 2899412..2899543 1 NC_010524.1 hypothetical protein 2899543 6160917 Lcho_2638 Leptothrix cholodnii SP-6 hypothetical protein YP_001791668.1 2899412 D 395495 CDS YP_001791669.1 171059320 6160918 2899559..2900146 1 NC_010524.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; Tellurite resistance methyltransferase, TehB, core; KEGG: rso:RSc1144 hypothetical protein; type 11 methyltransferase 2900146 6160918 Lcho_2639 Leptothrix cholodnii SP-6 type 11 methyltransferase YP_001791669.1 2899559 D 395495 CDS YP_001791670.1 171059321 6160919 2900205..2901086 1 NC_010524.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 2901086 6160919 Lcho_2640 Leptothrix cholodnii SP-6 dihydrodipicolinate synthase YP_001791670.1 2900205 D 395495 CDS YP_001791671.1 171059322 6160920 2901209..2902405 1 NC_010524.1 PFAM: NlpBDapX family lipoprotein; KEGG: mpt:Mpe_A2564 putative transmembrane protein; NlpB/DapX family lipoprotein 2902405 6160920 Lcho_2641 Leptothrix cholodnii SP-6 NlpB/DapX family lipoprotein YP_001791671.1 2901209 D 395495 CDS YP_001791672.1 171059323 6160921 complement(2902943..2904199) 1 NC_010524.1 PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: mpt:Mpe_A2568 hypothetical protein; cupin 4 family protein 2904199 6160921 Lcho_2642 Leptothrix cholodnii SP-6 cupin 4 family protein YP_001791672.1 2902943 R 395495 CDS YP_001791673.1 171059324 6160922 2904258..2904791 1 NC_010524.1 KEGG: mpt:Mpe_A2569 putative FkbP-type peptidyl-prolyl cis-trans isomerase; putative FkbP-type peptidyl-prolyl cis-trans isomerase 2904791 6160922 Lcho_2643 Leptothrix cholodnii SP-6 putative FkbP-type peptidyl-prolyl cis-trans isomerase YP_001791673.1 2904258 D 395495 CDS YP_001791674.1 171059325 6160923 complement(2904831..2905283) 1 NC_010524.1 KEGG: mpt:Mpe_A2570 dUTP diphosphatase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 2905283 6160923 Lcho_2644 Leptothrix cholodnii SP-6 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_001791674.1 2904831 R 395495 CDS YP_001791675.1 171059326 6161165 complement(2905298..2906557) 1 NC_010524.1 KEGG: mpt:Mpe_A2571 putative DNA/pantothenate metabolism flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 2906557 6161165 Lcho_2645 Leptothrix cholodnii SP-6 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_001791675.1 2905298 R 395495 CDS YP_001791676.1 171059327 6161166 2906719..2909091 1 NC_010524.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: azo:azo1830 putative TonB-denpendent receptor; TonB-dependent receptor plug 2909091 6161166 Lcho_2646 Leptothrix cholodnii SP-6 TonB-dependent receptor plug YP_001791676.1 2906719 D 395495 CDS YP_001791677.1 171059328 6161167 complement(2909098..2910312) 1 NC_010524.1 PFAM: Rh family protein/ammonium transporter; KEGG: pol:Bpro_4891 Rh-like protein/ammonium transporter; Rh family protein/ammonium transporter 2910312 6161167 Lcho_2647 Leptothrix cholodnii SP-6 Rh family protein/ammonium transporter YP_001791677.1 2909098 R 395495 CDS YP_001791678.1 171059329 6161168 2910729..2912168 1 NC_010524.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mpt:Mpe_A2088 putative ATP-dependent RNA helicase 1; DEAD/DEAH box helicase 2912168 6161168 Lcho_2648 Leptothrix cholodnii SP-6 DEAD/DEAH box helicase YP_001791678.1 2910729 D 395495 CDS YP_001791679.1 171059330 6161169 complement(2912212..2912715) 1 NC_010524.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2912715 6161169 Lcho_2649 Leptothrix cholodnii SP-6 N-acetyltransferase GCN5 YP_001791679.1 2912212 R 395495 CDS YP_001791680.1 171059331 6161170 complement(2913112..2913585) 1 NC_010524.1 KEGG: tcr:508175.329 60S ribosomal protein L19; 50S ribosomal protein L19 2913585 6161170 Lcho_2650 Leptothrix cholodnii SP-6 50S ribosomal protein L19 YP_001791680.1 2913112 R 395495 CDS YP_001791681.1 171059332 6161171 complement(2913681..2914544) 1 NC_010524.1 KEGG: mpt:Mpe_A2091 hypothetical protein; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; procollagen-proline dioxygenase 2914544 6161171 Lcho_2651 Leptothrix cholodnii SP-6 procollagen-proline dioxygenase YP_001791681.1 2913681 R 395495 CDS YP_001791682.1 171059333 6162796 complement(2914610..2915383) 1 NC_010524.1 PFAM: protein of unknown function DUF328; KEGG: pna:Pnap_3166 protein of unknown function DUF328; hypothetical protein 2915383 6162796 Lcho_2652 Leptothrix cholodnii SP-6 hypothetical protein YP_001791682.1 2914610 R 395495 CDS YP_001791683.1 171059334 6162797 2915445..2915873 1 NC_010524.1 KEGG: bpt:Bpet3332 hypothetical protein; hypothetical protein 2915873 6162797 Lcho_2653 Leptothrix cholodnii SP-6 hypothetical protein YP_001791683.1 2915445 D 395495 CDS YP_001791684.1 171059335 6162798 complement(2915874..2916428) 1 NC_010524.1 hypothetical protein 2916428 6162798 Lcho_2654 Leptothrix cholodnii SP-6 hypothetical protein YP_001791684.1 2915874 R 395495 CDS YP_001791685.1 171059336 6162799 2916592..2917230 1 NC_010524.1 KEGG: mpt:Mpe_A2297 putative endonuclease III protein; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; endonuclease III 2917230 6162799 Lcho_2655 Leptothrix cholodnii SP-6 endonuclease III YP_001791685.1 2916592 D 395495 CDS YP_001791686.1 171059337 6162800 complement(2917241..2918050) 1 NC_010524.1 PFAM: periplasmic binding protein; KEGG: pol:Bpro_2784 periplasmic binding protein; periplasmic-binding protein 2918050 6162800 Lcho_2656 Leptothrix cholodnii SP-6 periplasmic-binding protein YP_001791686.1 2917241 R 395495 CDS YP_001791687.1 171059338 6162801 complement(2918068..2918463) 1 NC_010524.1 KEGG: pol:Bpro_1578 aspartate alpha-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: aspartate decarboxylase; aspartate 1-decarboxylase 2918463 6162801 Lcho_2657 Leptothrix cholodnii SP-6 aspartate 1-decarboxylase YP_001791687.1 2918068 R 395495 CDS YP_001791688.1 171059339 6162802 complement(2918474..2919124) 1 NC_010524.1 PFAM: Phosphoglycerate mutase; KEGG: mpt:Mpe_A2301 fructose-2,6-biphosphatase; phosphoglycerate mutase 2919124 6162802 Lcho_2658 Leptothrix cholodnii SP-6 phosphoglycerate mutase YP_001791688.1 2918474 R 395495 CDS YP_001791689.1 171059340 6162005 complement(2919117..2919911) 1 NC_010524.1 TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: mpt:Mpe_A2302 cobalamin-5-phosphate synthase; cobalamin 5'-phosphate synthase 2919911 6162005 Lcho_2659 Leptothrix cholodnii SP-6 cobalamin 5'-phosphate synthase YP_001791689.1 2919117 R 395495 CDS YP_001791690.1 171059341 6162006 complement(2919911..2920990) 1 NC_010524.1 KEGG: dac:Daci_2816 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2920990 6162006 Lcho_2660 Leptothrix cholodnii SP-6 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_001791690.1 2919911 R 395495 CDS YP_001791691.1 171059342 6162007 complement(2921041..2922582) 1 NC_010524.1 TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: mpt:Mpe_A2304 cobyric acid synthase; cobyric acid synthase CobQ 2922582 6162007 Lcho_2661 Leptothrix cholodnii SP-6 cobyric acid synthase CobQ YP_001791691.1 2921041 R 395495 CDS YP_001791692.1 171059343 6162008 complement(2922598..2923395) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A2305 ferric-citrate ABC transporter ATPase; ABC transporter-like protein 2923395 6162008 Lcho_2662 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001791692.1 2922598 R 395495 CDS YP_001791693.1 171059344 6162009 complement(2923392..2924399) 1 NC_010524.1 PFAM: transport system permease protein; KEGG: mpt:Mpe_A2306 iron(III) dicitrate-binding protein; transport system permease 2924399 6162009 Lcho_2663 Leptothrix cholodnii SP-6 transport system permease YP_001791693.1 2923392 R 395495 CDS YP_001791694.1 171059345 6162010 complement(2924396..2925307) 1 NC_010524.1 PFAM: periplasmic binding protein; KEGG: mpt:Mpe_A2307 iron(III) dicitrate-binding protein; periplasmic-binding protein 2925307 6162010 Lcho_2664 Leptothrix cholodnii SP-6 periplasmic-binding protein YP_001791694.1 2924396 R 395495 CDS YP_001791695.1 171059346 6162011 complement(2925304..2925879) 1 NC_010524.1 PFAM: cobalbumin biosynthesis protein; KEGG: mpt:Mpe_A2308 adenosyl cobinamide kinase (cobalamin-5-phosphate synthase); cobalbumin biosynthesis protein 2925879 6162011 Lcho_2665 Leptothrix cholodnii SP-6 cobalbumin biosynthesis protein YP_001791695.1 2925304 R 395495 CDS YP_001791696.1 171059347 6161842 complement(2925891..2927807) 1 NC_010524.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mpt:Mpe_A2309 TonB-dependent outer membrane cobalamin receptor; TonB-dependent receptor 2927807 6161842 Lcho_2666 Leptothrix cholodnii SP-6 TonB-dependent receptor YP_001791696.1 2925891 R 395495 CDS YP_001791697.1 171059348 6161843 2928208..2928435 1 NC_010524.1 KEGG: mpt:Mpe_A2310 hypothetical protein; hypothetical protein 2928435 6161843 Lcho_2667 Leptothrix cholodnii SP-6 hypothetical protein YP_001791697.1 2928208 D 395495 CDS YP_001791698.1 171059349 6161844 2928432..2928758 1 NC_010524.1 PFAM: protein of unknown function DUF710; KEGG: mpt:Mpe_A2311 hypothetical protein; hypothetical protein 2928758 6161844 Lcho_2668 Leptothrix cholodnii SP-6 hypothetical protein YP_001791698.1 2928432 D 395495 CDS YP_001791699.1 171059350 6161846 2929036..2929509 1 NC_010524.1 PFAM: protein of unknown function DUF55; KEGG: bvi:Bcep1808_2542 protein of unknown function DUF55; hypothetical protein 2929509 6161846 Lcho_2669 Leptothrix cholodnii SP-6 hypothetical protein YP_001791699.1 2929036 D 395495 CDS YP_001791700.1 171059351 6161847 2929506..2930318 1 NC_010524.1 PFAM: protein of unknown function DUF81; KEGG: rfr:Rfer_2628 protein of unknown function DUF81; hypothetical protein 2930318 6161847 Lcho_2670 Leptothrix cholodnii SP-6 hypothetical protein YP_001791700.1 2929506 D 395495 CDS YP_001791701.1 171059352 6162853 complement(2930325..2931311) 1 NC_010524.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: mpt:Mpe_A2313 GGDEF domain containing protein; diguanylate cyclase 2931311 6162853 Lcho_2671 Leptothrix cholodnii SP-6 diguanylate cyclase YP_001791701.1 2930325 R 395495 CDS YP_001791702.1 171059353 6162854 complement(2931385..2931963) 1 NC_010524.1 KEGG: pol:Bpro_3714 hypothetical protein; hypothetical protein 2931963 6162854 Lcho_2672 Leptothrix cholodnii SP-6 hypothetical protein YP_001791702.1 2931385 R 395495 CDS YP_001791703.1 171059354 6162855 complement(2931985..2933349) 1 NC_010524.1 KEGG: mpt:Mpe_A2097 putative ferredoxin; putative ferredoxin 2933349 6162855 Lcho_2673 Leptothrix cholodnii SP-6 putative ferredoxin YP_001791703.1 2931985 R 395495 CDS YP_001791704.1 171059355 6162856 complement(2933452..2933871) 1 NC_010524.1 PFAM: Rubrerythrin; KEGG: mpt:Mpe_A2098 putative oxidative stress related rubrerythrin protein; rubrerythrin 2933871 6162856 Lcho_2674 Leptothrix cholodnii SP-6 rubrerythrin YP_001791704.1 2933452 R 395495 CDS YP_001791705.1 171059356 6162857 complement(2934050..2935201) 1 NC_010524.1 PFAM: ANTAR domain protein; KEGG: pol:Bpro_3275 response regulator receiver (CheY-like) and ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein 2935201 6162857 Lcho_2675 Leptothrix cholodnii SP-6 response regulator receiver/ANTAR domain-containing protein YP_001791705.1 2934050 R 395495 CDS YP_001791706.1 171059357 6162858 2935702..2936958 1 NC_010524.1 PFAM: major facilitator superfamily MFS_1; KEGG: mpt:Mpe_A2315 nitrate transporter; major facilitator transporter 2936958 6162858 Lcho_2676 Leptothrix cholodnii SP-6 major facilitator transporter YP_001791706.1 2935702 D 395495 CDS YP_001791707.1 171059358 6162859 complement(2937024..2938766) 1 NC_010524.1 PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: mpt:Mpe_A2316 putative serine/threonine protein kinase; protein serine/threonine phosphatase 2938766 6162859 Lcho_2677 Leptothrix cholodnii SP-6 protein serine/threonine phosphatase YP_001791707.1 2937024 R 395495 CDS YP_001791708.1 171059359 6162840 2938910..2941375 1 NC_010524.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mpt:Mpe_A2317 nitrite reductase (NAD(P)H), large subunit; nitrite reductase (NAD(P)H) large subunit 2941375 6162840 Lcho_2678 Leptothrix cholodnii SP-6 nitrite reductase (NAD(P)H) large subunit YP_001791708.1 2938910 D 395495 CDS YP_001791709.1 171059360 6162841 2941408..2941764 1 NC_010524.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: rfr:Rfer_2558 nitrite reductase (NAD(P)H) large subunit, NirD; nitrite reductase (NAD(P)H) small subunit 2941764 6162841 Lcho_2679 Leptothrix cholodnii SP-6 nitrite reductase (NAD(P)H) small subunit YP_001791709.1 2941408 D 395495 CDS YP_001791710.1 171059361 6162842 2941827..2944628 1 NC_010524.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mpt:Mpe_A2319 putative nitrate reductase; molybdopterin oxidoreductase 2944628 6162842 Lcho_2680 Leptothrix cholodnii SP-6 molybdopterin oxidoreductase YP_001791710.1 2941827 D 395495 CDS YP_001791711.1 171059362 6162843 complement(2944785..2946119) 1 NC_010524.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: azo:azo0447 transcriptional regulatory protein; two component sigma-54 specific Fis family transcriptional regulator 2946119 6162843 Lcho_2681 Leptothrix cholodnii SP-6 two component sigma-54 specific Fis family transcriptional regulator YP_001791711.1 2944785 R 395495 CDS YP_001791712.1 171059363 6162844 complement(2946116..2948023) 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: azo:azo0448 sensor histidine kinase; histidine kinase 2948023 6162844 Lcho_2682 Leptothrix cholodnii SP-6 histidine kinase YP_001791712.1 2946116 R 395495 CDS YP_001791713.1 171059364 6162845 complement(2948020..2948148) 1 NC_010524.1 hypothetical protein 2948148 6162845 Lcho_2683 Leptothrix cholodnii SP-6 hypothetical protein YP_001791713.1 2948020 R 395495 CDS YP_001791714.1 171059365 6162846 complement(2948203..2953047) 1 NC_010524.1 PFAM: NAD-glutamate dehydrogenase; KEGG: pol:Bpro_3020 NAD-glutamate dehydrogenase; NAD-glutamate dehydrogenase 2953047 6162846 Lcho_2684 Leptothrix cholodnii SP-6 NAD-glutamate dehydrogenase YP_001791714.1 2948203 R 395495 CDS YP_001791715.1 171059366 6162666 complement(2953631..2954365) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0446 putative polar amino acid transport system ATP-binding protein; ABC transporter-like protein 2954365 6162666 Lcho_2685 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001791715.1 2953631 R 395495 CDS YP_001791716.1 171059367 6162667 complement(2954378..2955043) 1 NC_010524.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A0445 amino acid permease; polar amino acid ABC transporter inner membrane subunit 2955043 6162667 Lcho_2686 Leptothrix cholodnii SP-6 polar amino acid ABC transporter inner membrane subunit YP_001791716.1 2954378 R 395495 CDS YP_001791717.1 171059368 6162668 complement(2955040..2955783) 1 NC_010524.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A0444 putative ABC transporter protein, putative glutamate/aspartate transmembrane subunit; polar amino acid ABC transporter inner membrane subunit 2955783 6162668 Lcho_2687 Leptothrix cholodnii SP-6 polar amino acid ABC transporter inner membrane subunit YP_001791717.1 2955040 R 395495 CDS YP_001791718.1 171059369 6162669 complement(2955871..2956773) 1 NC_010524.1 PFAM: extracellular solute-binding protein family 3; KEGG: vei:Veis_1219 extracellular solute-binding protein, family 3; extracellular solute-binding protein 2956773 6162669 Lcho_2688 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001791718.1 2955871 R 395495 CDS YP_001791719.1 171059370 6162670 complement(2956805..2957875) 1 NC_010524.1 KEGG: azo:azo0438 periplasmic L-asparaginase II; TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; L-asparaginase 2957875 6162670 Lcho_2689 Leptothrix cholodnii SP-6 L-asparaginase YP_001791719.1 2956805 R 395495 CDS YP_001791720.1 171059371 6162671 2958275..2959204 1 NC_010524.1 PFAM: glycosyl transferase family 3; KEGG: mpt:Mpe_A2320 hypothetical protein; glycosyl transferase family protein 2959204 6162671 Lcho_2690 Leptothrix cholodnii SP-6 glycosyl transferase family protein YP_001791720.1 2958275 D 395495 CDS YP_001791721.1 171059372 6162672 complement(2959304..2961202) 1 NC_010524.1 catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; propionyl-CoA synthetase 2961202 prpE 6162672 prpE Leptothrix cholodnii SP-6 propionyl-CoA synthetase YP_001791721.1 2959304 R 395495 CDS YP_001791722.1 171059373 6162370 complement(2961297..2961758) 1 NC_010524.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpt:Mpe_A1018 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase 2961758 6162370 Lcho_2692 Leptothrix cholodnii SP-6 glyoxalase/bleomycin resistance protein/dioxygenase YP_001791722.1 2961297 R 395495 CDS YP_001791723.1 171059374 6162371 complement(2961779..2963854) 1 NC_010524.1 PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: ajs:Ajs_2043 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase L chain ATP-binding 2963854 6162371 Lcho_2693 Leptothrix cholodnii SP-6 carbamoyl-phosphate synthase L chain ATP-binding YP_001791723.1 2961779 R 395495 CDS YP_001791724.1 171059375 6162372 complement(2963875..2965407) 1 NC_010524.1 PFAM: carboxyl transferase; KEGG: pol:Bpro_2164 carboxyl transferase; carboxyl transferase 2965407 6162372 Lcho_2694 Leptothrix cholodnii SP-6 carboxyl transferase YP_001791724.1 2963875 R 395495 CDS YP_001791725.1 171059376 6162373 complement(2965468..2966523) 1 NC_010524.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase 2966523 6162373 Lcho_2695 Leptothrix cholodnii SP-6 arginine/ornithine transport system ATPase YP_001791725.1 2965468 R 395495 CDS YP_001791726.1 171059377 6162374 complement(2966516..2966989) 1 NC_010524.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_C7224 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2966989 6162374 Lcho_2696 Leptothrix cholodnii SP-6 N-acetyltransferase GCN5 YP_001791726.1 2966516 R 395495 CDS YP_001791727.1 171059378 6162375 complement(2967036..2969198) 1 NC_010524.1 MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 2969198 6162375 Lcho_2697 Leptothrix cholodnii SP-6 methylmalonyl-CoA mutase YP_001791727.1 2967036 R 395495 CDS YP_001791728.1 171059379 6162376 2969235..2969933 1 NC_010524.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pna:Pnap_2384 transcriptional regulator, GntR family; GntR family transcriptional regulator 2969933 6162376 Lcho_2698 Leptothrix cholodnii SP-6 GntR family transcriptional regulator YP_001791728.1 2969235 D 395495 CDS YP_001791729.1 171059380 6162319 2970048..2971208 1 NC_010524.1 KEGG: pna:Pnap_3953 succinyl-CoA synthetase, beta subunit; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; succinyl-CoA synthetase subunit beta 2971208 6162319 Lcho_2699 Leptothrix cholodnii SP-6 succinyl-CoA synthetase subunit beta YP_001791729.1 2970048 D 395495 CDS YP_001791730.1 171059381 6162320 2971226..2972119 1 NC_010524.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 2972119 6162320 Lcho_2700 Leptothrix cholodnii SP-6 succinyl-CoA synthetase subunit alpha YP_001791730.1 2971226 D 395495 CDS YP_001791731.1 171059382 6162321 complement(2972288..2973601) 1 NC_010524.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 2973601 gltA 6162321 gltA Leptothrix cholodnii SP-6 type II citrate synthase YP_001791731.1 2972288 R 395495 CDS YP_001791732.1 171059383 6162322 complement(2973669..2973944) 1 NC_010524.1 PFAM: protein of unknown function DUF339; KEGG: mpt:Mpe_A2166 hypothetical protein; hypothetical protein 2973944 6162322 Lcho_2702 Leptothrix cholodnii SP-6 hypothetical protein YP_001791732.1 2973669 R 395495 CDS YP_001791733.1 171059384 6162323 complement(2973976..2974680) 1 NC_010524.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: mpt:Mpe_A2167 succinate dehydrogenase (ubiquinone); succinate dehydrogenase and fumarate reductase iron-sulfur protein 2974680 6162323 Lcho_2703 Leptothrix cholodnii SP-6 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_001791733.1 2973976 R 395495 CDS YP_001791734.1 171059385 6162324 complement(2974699..2976507) 1 NC_010524.1 KEGG: mpt:Mpe_A2168 succinate dehydrogenase; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; succinate dehydrogenase, flavoprotein subunit 2976507 6162324 Lcho_2704 Leptothrix cholodnii SP-6 succinate dehydrogenase, flavoprotein subunit YP_001791734.1 2974699 R 395495 CDS YP_001791735.1 171059386 6162325 complement(2976507..2976869) 1 NC_010524.1 TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: mpt:Mpe_A2169 transmembrane succinate dehydrogenase (hydrophobic membrane anchor subunit) oxidoreductase protein; succinate dehydrogenase, hydrophobic membrane anchor protein 2976869 6162325 Lcho_2705 Leptothrix cholodnii SP-6 succinate dehydrogenase, hydrophobic membrane anchor protein YP_001791735.1 2976507 R 395495 CDS YP_001791736.1 171059387 6162312 complement(2976907..2977335) 1 NC_010524.1 TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: mpt:Mpe_A2170 putative succinate dehydrogenase cytochrome b-556 subunit; succinate dehydrogenase, cytochrome b556 subunit 2977335 6162312 Lcho_2706 Leptothrix cholodnii SP-6 succinate dehydrogenase, cytochrome b556 subunit YP_001791736.1 2976907 R 395495 CDS YP_001791737.1 171059388 6162313 complement(2977429..2978208) 1 NC_010524.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: mpt:Mpe_A2171 putative transcription regulator protein; GntR family transcriptional regulator 2978208 6162313 Lcho_2707 Leptothrix cholodnii SP-6 GntR family transcriptional regulator YP_001791737.1 2977429 R 395495 CDS YP_001791738.1 171059389 6162314 2978431..2979417 1 NC_010524.1 catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 2979417 6162314 Lcho_2708 Leptothrix cholodnii SP-6 malate dehydrogenase YP_001791738.1 2978431 D 395495 CDS YP_001791739.1 171059390 6162315 2979544..2980596 1 NC_010524.1 KEGG: mpt:Mpe_A2173 putative lyase; putative lyase 2980596 6162315 Lcho_2709 Leptothrix cholodnii SP-6 putative lyase YP_001791739.1 2979544 D 395495 CDS YP_001791740.1 171059391 6162316 2980807..2981247 1 NC_010524.1 KEGG: mpt:Mpe_A1366 putative signal peptide protein; putative signal peptide protein 2981247 6162316 Lcho_2710 Leptothrix cholodnii SP-6 putative signal peptide protein YP_001791740.1 2980807 D 395495 CDS YP_001791741.1 171059392 6162317 2981459..2984050 1 NC_010524.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 2984050 6162317 Lcho_2711 Leptothrix cholodnii SP-6 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_001791741.1 2981459 D 395495 CDS YP_001791742.1 171059393 6162318 complement(2984145..2985056) 1 NC_010524.1 catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA; DNA ligase 2985056 6162318 Lcho_2712 Leptothrix cholodnii SP-6 DNA ligase YP_001791742.1 2984145 R 395495 CDS YP_001791743.1 171059394 6160890 complement(2985219..2986673) 1 NC_010524.1 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I 2986673 sbcB 6160890 sbcB Leptothrix cholodnii SP-6 exonuclease I YP_001791743.1 2985219 R 395495 CDS YP_001791744.1 171059395 6160891 complement(2986728..2987954) 1 NC_010524.1 KEGG: mpt:Mpe_A1064 hypothetical protein; hypothetical protein 2987954 6160891 Lcho_2714 Leptothrix cholodnii SP-6 hypothetical protein YP_001791744.1 2986728 R 395495 CDS YP_001791745.1 171059396 6160892 complement(2987983..2989377) 1 NC_010524.1 TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: mpt:Mpe_A1065 polysaccharide biosynthesis protein, putative; undecaprenyl-phosphate glucose phosphotransferase 2989377 6160892 Lcho_2715 Leptothrix cholodnii SP-6 undecaprenyl-phosphate glucose phosphotransferase YP_001791745.1 2987983 R 395495 CDS YP_001791746.1 171059397 6160893 complement(2989534..2991444) 1 NC_010524.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mpt:Mpe_A2856 GGDEF domain containing protein; diguanylate cyclase 2991444 6160893 Lcho_2716 Leptothrix cholodnii SP-6 diguanylate cyclase YP_001791746.1 2989534 R 395495 CDS YP_001791747.1 171059398 6160894 complement(2991560..2993722) 1 NC_010524.1 KEGG: mpt:Mpe_A2857 sensory box/response regulator; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; response regulator receiver modulated diguanylate cyclase/phosphodiesterase 2993722 6160894 Lcho_2717 Leptothrix cholodnii SP-6 response regulator receiver modulated diguanylate cyclase/phosphodiesterase YP_001791747.1 2991560 R 395495 CDS YP_001791748.1 171059399 6160895 complement(2993732..2997499) 1 NC_010524.1 KEGG: mpt:Mpe_A2858 signal transduction histidine kinase-like protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 2997499 6160895 Lcho_2718 Leptothrix cholodnii SP-6 multi-sensor hybrid histidine kinase YP_001791748.1 2993732 R 395495 CDS YP_001791749.1 171059400 6160896 2997834..2999183 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A2859 bacteriophytochrome-like protein; histidine kinase 2999183 6160896 Lcho_2719 Leptothrix cholodnii SP-6 histidine kinase YP_001791749.1 2997834 D 395495 CDS YP_001791750.1 171059401 6160611 complement(2999225..3000355) 1 NC_010524.1 KEGG: ade:Adeh_2645 cellulose biosynthesis (CelD)-like protein; hypothetical protein 3000355 6160611 Lcho_2720 Leptothrix cholodnii SP-6 hypothetical protein YP_001791750.1 2999225 R 395495 CDS YP_001791751.1 171059402 6160612 complement(3000367..3000972) 1 NC_010524.1 PFAM: response regulator receiver; KEGG: mpt:Mpe_A2860 response regulator; response regulator receiver protein 3000972 6160612 Lcho_2721 Leptothrix cholodnii SP-6 response regulator receiver protein YP_001791751.1 3000367 R 395495 CDS YP_001791752.1 171059403 6160613 complement(3001061..3003997) 1 NC_010524.1 KEGG: mpt:Mpe_A2861 signal transduction histidine kinase-like protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; putative signal transduction histidine kinase 3003997 6160613 Lcho_2722 Leptothrix cholodnii SP-6 putative signal transduction histidine kinase YP_001791752.1 3001061 R 395495 CDS YP_001791753.1 171059404 6160614 complement(3004012..3005211) 1 NC_010524.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: mpt:Mpe_A3062 signal transduction protein; putative signal transduction protein 3005211 6160614 Lcho_2723 Leptothrix cholodnii SP-6 putative signal transduction protein YP_001791753.1 3004012 R 395495 CDS YP_001791754.1 171059405 6160615 complement(3005233..3006450) 1 NC_010524.1 TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: mpt:Mpe_A3063 flagellin-related hook-associated protein; flagellar hook-associated protein 3 3006450 6160615 Lcho_2724 Leptothrix cholodnii SP-6 flagellar hook-associated protein 3 YP_001791754.1 3005233 R 395495 CDS YP_001791755.1 171059406 6160616 complement(3006548..3008470) 1 NC_010524.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: mpt:Mpe_A3064 flagellar hook-associated protein; flagellar hook-associated protein FlgK 3008470 6160616 Lcho_2725 Leptothrix cholodnii SP-6 flagellar hook-associated protein FlgK YP_001791755.1 3006548 R 395495 CDS YP_001791756.1 171059407 6160617 complement(3008467..3009513) 1 NC_010524.1 KEGG: mpt:Mpe_A3065 flagellum-specific muramidase; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; flagellar rod assembly protein/muramidase FlgJ 3009513 6160617 Lcho_2726 Leptothrix cholodnii SP-6 flagellar rod assembly protein/muramidase FlgJ YP_001791756.1 3008467 R 395495 CDS YP_001791757.1 171059408 6163465 complement(3009516..3010694) 1 NC_010524.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 3010694 flgI 6163465 flgI Leptothrix cholodnii SP-6 flagellar basal body P-ring protein YP_001791757.1 3009516 R 395495 CDS YP_001791758.1 171059409 6163466 complement(3010741..3011442) 1 NC_010524.1 PFAM: flagellar L-ring protein; KEGG: mpt:Mpe_A3067 flagellar basal-body L-ring protein; flagellar L-ring protein 3011442 6163466 Lcho_2728 Leptothrix cholodnii SP-6 flagellar L-ring protein YP_001791758.1 3010741 R 395495 CDS YP_001791759.1 171059410 6163467 complement(3011452..3012234) 1 NC_010524.1 TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: mpt:Mpe_A3068 flagellar basal body and hook protein; flagellar basal-body rod protein FlgG 3012234 6163467 Lcho_2729 Leptothrix cholodnii SP-6 flagellar basal-body rod protein FlgG YP_001791759.1 3011452 R 395495 CDS YP_001791760.1 171059411 6163468 complement(3012252..3012977) 1 NC_010524.1 TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; KEGG: mpt:Mpe_A3069 flagellar basal body and hook protein; flagellar basal-body rod protein FlgF 3012977 6163468 Lcho_2730 Leptothrix cholodnii SP-6 flagellar basal-body rod protein FlgF YP_001791760.1 3012252 R 395495 CDS YP_001791761.1 171059412 6163469 complement(3012992..3014497) 1 NC_010524.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: bxe:Bxe_A0143 putative flagellar hook protein FlgE; hypothetical protein 3014497 6163469 Lcho_2731 Leptothrix cholodnii SP-6 hypothetical protein YP_001791761.1 3012992 R 395495 CDS YP_001791762.1 171059413 6163470 complement(3014557..3015231) 1 NC_010524.1 PFAM: flagellar hook capping protein; KEGG: rfr:Rfer_3716 flagellar hook capping protein; flagellar hook capping protein 3015231 6163470 Lcho_2732 Leptothrix cholodnii SP-6 flagellar hook capping protein YP_001791762.1 3014557 R 395495 CDS YP_001791763.1 171059414 6163471 complement(3015298..3015708) 1 NC_010524.1 TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: mpt:Mpe_A3072 flagellar basal body rod protein; flagellar basal-body rod protein FlgC 3015708 6163471 Lcho_2733 Leptothrix cholodnii SP-6 flagellar basal-body rod protein FlgC YP_001791763.1 3015298 R 395495 CDS YP_001791764.1 171059415 6161810 complement(3015743..3016147) 1 NC_010524.1 TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: mpt:Mpe_A3073 flagellar basal body protein; flagellar basal-body rod protein FlgB 3016147 6161810 Lcho_2734 Leptothrix cholodnii SP-6 flagellar basal-body rod protein FlgB YP_001791764.1 3015743 R 395495 CDS YP_001791765.1 171059416 6161811 3016319..3017086 1 NC_010524.1 TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: mpt:Mpe_A3074 flagellar basal body P-ring biosynthesis protein; flagella basal body P-ring formation protein FlgA 3017086 6161811 Lcho_2735 Leptothrix cholodnii SP-6 flagella basal body P-ring formation protein FlgA YP_001791765.1 3016319 D 395495 CDS YP_001791766.1 171059417 6161812 3017406..3017726 1 NC_010524.1 PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: mpt:Mpe_A3075 negative regulator of flagellin synthesis (anti-S28 factor); anti-sigma-28 factor FlgM 3017726 6161812 Lcho_2736 Leptothrix cholodnii SP-6 anti-sigma-28 factor FlgM YP_001791766.1 3017406 D 395495 CDS YP_001791767.1 171059418 6161813 3017723..3018130 1 NC_010524.1 KEGG: mpt:Mpe_A3076 hypothetical protein; hypothetical protein 3018130 6161813 Lcho_2737 Leptothrix cholodnii SP-6 hypothetical protein YP_001791767.1 3017723 D 395495 CDS YP_001791768.1 171059419 6161814 complement(3018137..3018511) 1 NC_010524.1 PFAM: Domain of unknown function DUF1801; hypothetical protein 3018511 6161814 Lcho_2738 Leptothrix cholodnii SP-6 hypothetical protein YP_001791768.1 3018137 R 395495 CDS YP_001791769.1 171059420 6161815 complement(3018574..3018993) 1 NC_010524.1 KEGG: mpt:Mpe_A1206 hypothetical protein; hypothetical protein 3018993 6161815 Lcho_2739 Leptothrix cholodnii SP-6 hypothetical protein YP_001791769.1 3018574 R 395495 CDS YP_001791770.1 171059421 6161816 complement(3019129..3019698) 1 NC_010524.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 3019698 dcd 6161816 dcd Leptothrix cholodnii SP-6 deoxycytidine triphosphate deaminase YP_001791770.1 3019129 R 395495 CDS YP_001791771.1 171059422 6163038 3019823..3020362 1 NC_010524.1 PFAM: protein of unknown function DUF962; KEGG: psb:Psyr_0242 protein of unknown function DUF962; hypothetical protein 3020362 6163038 Lcho_2741 Leptothrix cholodnii SP-6 hypothetical protein YP_001791771.1 3019823 D 395495 CDS YP_001791772.1 171059423 6163039 complement(3020402..3020773) 1 NC_010524.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: mpt:Mpe_A3165 putative HNS-like transcription regulator protein; histone family protein nucleoid-structuring protein H-NS 3020773 6163039 Lcho_2742 Leptothrix cholodnii SP-6 histone family protein nucleoid-structuring protein H-NS YP_001791772.1 3020402 R 395495 CDS YP_001791773.1 171059424 6163040 3020893..3021936 1 NC_010524.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pna:Pnap_2134 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 3021936 6163040 Lcho_2743 Leptothrix cholodnii SP-6 alcohol dehydrogenase YP_001791773.1 3020893 D 395495 CDS YP_001791774.1 171059425 6163041 complement(3021920..3023260) 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mfa:Mfla_1283 PAS/PAC sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 3023260 6163041 Lcho_2744 Leptothrix cholodnii SP-6 PAS/PAC sensor signal transduction histidine kinase YP_001791774.1 3021920 R 395495 CDS YP_001791775.1 171059426 6163042 complement(3023305..3024774) 1 NC_010524.1 PFAM: chemotaxis sensory transducer; KEGG: dac:Daci_5410 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3024774 6163042 Lcho_2745 Leptothrix cholodnii SP-6 methyl-accepting chemotaxis sensory transducer YP_001791775.1 3023305 R 395495 CDS YP_001791776.1 171059427 6163043 3024930..3025292 1 NC_010524.1 PFAM: response regulator receiver; KEGG: dac:Daci_1873 response regulator receiver protein; response regulator receiver protein 3025292 6163043 Lcho_2746 Leptothrix cholodnii SP-6 response regulator receiver protein YP_001791776.1 3024930 D 395495 CDS YP_001791777.1 171059428 6163044 complement(3025302..3026180) 1 NC_010524.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: reh:H16_A0643 uncharacterized protein required for formate dehydrogenase activity; formate dehydrogenase family accessory protein FdhD 3026180 6163044 Lcho_2747 Leptothrix cholodnii SP-6 formate dehydrogenase family accessory protein FdhD YP_001791777.1 3025302 R 395495 CDS YP_001791778.1 171059429 6163987 3026315..3027106 1 NC_010524.1 KEGG: ade:Adeh_1032 hypothetical protein; hypothetical protein 3027106 6163987 Lcho_2748 Leptothrix cholodnii SP-6 hypothetical protein YP_001791778.1 3026315 D 395495 CDS YP_001791779.1 171059430 6163988 complement(3027113..3027409) 1 NC_010524.1 KEGG: mca:MCA1389 formate dehydrogenase, delta subunit; hypothetical protein 3027409 6163988 Lcho_2749 Leptothrix cholodnii SP-6 hypothetical protein YP_001791779.1 3027113 R 395495 CDS YP_001791780.1 171059431 6163989 complement(3027406..3030315) 1 NC_010524.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mpt:Mpe_A3710 NAD-dependent formate dehydrogenase alpha subunit; formate dehydrogenase subunit alpha 3030315 6163989 Lcho_2750 Leptothrix cholodnii SP-6 formate dehydrogenase subunit alpha YP_001791780.1 3027406 R 395495 CDS YP_001791781.1 171059432 6163990 complement(3030326..3031897) 1 NC_010524.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mpt:Mpe_A3709 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 3031897 6163990 Lcho_2751 Leptothrix cholodnii SP-6 NADH dehydrogenase (quinone) YP_001791781.1 3030326 R 395495 CDS YP_001791782.1 171059433 6163991 complement(3031894..3032415) 1 NC_010524.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: mpt:Mpe_A3708 NAD-dependent formate dehydrogenase gamma subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit 3032415 6163991 Lcho_2752 Leptothrix cholodnii SP-6 NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_001791782.1 3031894 R 395495 CDS YP_001791783.1 171059434 6163992 complement(3032552..3033514) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pna:Pnap_0823 transcriptional regulator, LysR family; LysR family transcriptional regulator 3033514 6163992 Lcho_2753 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001791783.1 3032552 R 395495 CDS YP_001791784.1 171059435 6163993 3033662..3034174 1 NC_010524.1 hypothetical protein 3034174 6163993 Lcho_2754 Leptothrix cholodnii SP-6 hypothetical protein YP_001791784.1 3033662 D 395495 CDS YP_001791785.1 171059436 6161388 complement(3034178..3035272) 1 NC_010524.1 PFAM: protein of unknown function DUF59; KEGG: mpt:Mpe_A1163 putative iron sulfur binding protein; hypothetical protein 3035272 6161388 Lcho_2755 Leptothrix cholodnii SP-6 hypothetical protein YP_001791785.1 3034178 R 395495 CDS YP_001791786.1 171059437 6161389 complement(3035358..3035693) 1 NC_010524.1 PFAM: ferredoxin; KEGG: mpt:Mpe_A1368 ferredoxin; ferredoxin 3035693 6161389 Lcho_2756 Leptothrix cholodnii SP-6 ferredoxin YP_001791786.1 3035358 R 395495 CDS YP_001791787.1 171059438 6161390 complement(3035690..3036745) 1 NC_010524.1 KEGG: azc:AZC_0688 hypothetical protein; hypothetical protein 3036745 6161390 Lcho_2757 Leptothrix cholodnii SP-6 hypothetical protein YP_001791787.1 3035690 R 395495 CDS YP_001791788.1 171059439 6161391 3036864..3038933 1 NC_010524.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 3038933 metG 6161391 metG Leptothrix cholodnii SP-6 methionyl-tRNA synthetase YP_001791788.1 3036864 D 395495 CDS YP_001791789.1 171059440 6161392 3038948..3039733 1 NC_010524.1 PFAM: protein of unknown function DUF1275; KEGG: pol:Bpro_0910 protein of unknown function DUF1275; hypothetical protein 3039733 6161392 Lcho_2759 Leptothrix cholodnii SP-6 hypothetical protein YP_001791789.1 3038948 D 395495 CDS YP_001791790.1 171059441 6161393 3039794..3041617 1 NC_010524.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: mpt:Mpe_A1160 sulfate transporter; sulfate transporter 3041617 6161393 Lcho_2760 Leptothrix cholodnii SP-6 sulfate transporter YP_001791790.1 3039794 D 395495 CDS YP_001791791.1 171059442 6161394 3041660..3041860 1 NC_010524.1 KEGG: mpt:Mpe_A1158 hypothetical protein; hypothetical protein 3041860 6161394 Lcho_2761 Leptothrix cholodnii SP-6 hypothetical protein YP_001791791.1 3041660 D 395495 CDS YP_001791792.1 171059443 6163620 3041857..3042768 1 NC_010524.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: mpt:Mpe_A1157 segregation and condensation protein A; chromosome segregation and condensation protein ScpA 3042768 6163620 Lcho_2762 Leptothrix cholodnii SP-6 chromosome segregation and condensation protein ScpA YP_001791792.1 3041857 D 395495 CDS YP_001791793.1 171059444 6163621 3043118..3045373 1 NC_010524.1 KEGG: eba:ebA2924 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3045373 6163621 Lcho_2763 Leptothrix cholodnii SP-6 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001791793.1 3043118 D 395495 CDS YP_001791794.1 171059445 6163622 complement(3045378..3046355) 1 NC_010524.1 TIGRFAM: guanosine monophosphate reductase; PFAM: IMP dehydrogenase/GMP reductase; KEGG: ajs:Ajs_3326 guanosine 5'-monophosphate oxidoreductase; guanosine 5'-monophosphate oxidoreductase 3046355 6163622 Lcho_2764 Leptothrix cholodnii SP-6 guanosine 5'-monophosphate oxidoreductase YP_001791794.1 3045378 R 395495 CDS YP_001791795.1 171059446 6163623 complement(3046557..3048158) 1 NC_010524.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: bja:bll1362 hypothetical protein; diguanylate cyclase 3048158 6163623 Lcho_2765 Leptothrix cholodnii SP-6 diguanylate cyclase YP_001791795.1 3046557 R 395495 CDS YP_001791796.1 171059447 6163624 complement(3048265..3049323) 1 NC_010524.1 PFAM: Patatin; KEGG: pol:Bpro_0732 patatin; patatin 3049323 6163624 Lcho_2766 Leptothrix cholodnii SP-6 patatin YP_001791796.1 3048265 R 395495 CDS YP_001791797.1 171059448 6163625 3049400..3051946 1 NC_010524.1 PFAM: UvrD/REP helicase; KEGG: mpt:Mpe_A1142 DNA helicase II; UvrD/REP helicase 3051946 6163625 Lcho_2767 Leptothrix cholodnii SP-6 UvrD/REP helicase YP_001791797.1 3049400 D 395495 CDS YP_001791798.1 171059449 6163626 complement(3052000..3052497) 1 NC_010524.1 PFAM: Ferritin Dps family protein; KEGG: ajs:Ajs_0378 ferritin, Dps family protein; ferritin Dps family protein 3052497 6163626 Lcho_2768 Leptothrix cholodnii SP-6 ferritin Dps family protein YP_001791798.1 3052000 R 395495 CDS YP_001791799.1 171059450 6163402 complement(3052648..3053901) 1 NC_010524.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: mpt:Mpe_A2468 isocitrate dehydrogenase; isocitrate dehydrogenase 3053901 6163402 Lcho_2769 Leptothrix cholodnii SP-6 isocitrate dehydrogenase YP_001791799.1 3052648 R 395495 CDS YP_001791800.1 171059451 6163403 complement(3053970..3054689) 1 NC_010524.1 KEGG: mpt:Mpe_A2469 putative transmembrane protein; putative transmembrane protein 3054689 6163403 Lcho_2770 Leptothrix cholodnii SP-6 putative transmembrane protein YP_001791800.1 3053970 R 395495 CDS YP_001791801.1 171059452 6163404 complement(3054689..3056152) 1 NC_010524.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3056152 6163404 Lcho_2771 Leptothrix cholodnii SP-6 coproporphyrinogen III oxidase YP_001791801.1 3054689 R 395495 CDS YP_001791802.1 171059453 6163405 3056325..3057062 1 NC_010524.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mpt:Mpe_A2471 transcription factor Fnr; Crp/FNR family transcriptional regulator 3057062 6163405 Lcho_2772 Leptothrix cholodnii SP-6 Crp/FNR family transcriptional regulator YP_001791802.1 3056325 D 395495 CDS YP_001791803.1 171059454 6163406 complement(3057075..3057407) 1 NC_010524.1 KEGG: vei:Veis_1164 hypothetical protein; hypothetical protein 3057407 6163406 Lcho_2773 Leptothrix cholodnii SP-6 hypothetical protein YP_001791803.1 3057075 R 395495 CDS YP_001791804.1 171059455 6163407 complement(3057404..3057667) 1 NC_010524.1 KEGG: pna:Pnap_3777 hypothetical protein; hypothetical protein 3057667 6163407 Lcho_2774 Leptothrix cholodnii SP-6 hypothetical protein YP_001791804.1 3057404 R 395495 CDS YP_001791805.1 171059456 6163408 complement(3057683..3059170) 1 NC_010524.1 TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: pna:Pnap_3778 4Fe-4S ferredoxin, iron-sulfur binding domain protein; cytochrome c oxidase accessory protein CcoG 3059170 6163408 Lcho_2775 Leptothrix cholodnii SP-6 cytochrome c oxidase accessory protein CcoG YP_001791805.1 3057683 R 395495 CDS YP_001791806.1 171059457 6162267 complement(3059193..3060125) 1 NC_010524.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: mpt:Mpe_A2475 putative cytochrome c oxidase (subunit III) transmembrane protein; cytochrome c oxidase, cbb3-type subunit III 3060125 6162267 Lcho_2776 Leptothrix cholodnii SP-6 cytochrome c oxidase, cbb3-type subunit III YP_001791806.1 3059193 R 395495 CDS YP_001791807.1 171059458 6162268 complement(3060118..3060324) 1 NC_010524.1 PFAM: Cbb3-type cytochrome oxidase component; KEGG: rfr:Rfer_1932 Cbb3-type cytochrome oxidase component; cbb3-type cytochrome oxidase subunit 3060324 6162268 Lcho_2777 Leptothrix cholodnii SP-6 cbb3-type cytochrome oxidase subunit YP_001791807.1 3060118 R 395495 CDS YP_001791808.1 171059459 6162269 complement(3060332..3060961) 1 NC_010524.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 3060961 6162269 Lcho_2778 Leptothrix cholodnii SP-6 cbb3-type cytochrome c oxidase subunit II YP_001791808.1 3060332 R 395495 CDS YP_001791809.1 171059460 6162270 complement(3060983..3062422) 1 NC_010524.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 3062422 6162270 Lcho_2779 Leptothrix cholodnii SP-6 cbb3-type cytochrome c oxidase subunit I YP_001791809.1 3060983 R 395495 CDS YP_001791810.1 171059461 6162271 complement(3062478..3062648) 1 NC_010524.1 TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: dac:Daci_2774 cytochrome oxidase maturation protein, cbb3-type; cbb3-type cytochrome oxidase maturation protein 3062648 6162271 Lcho_2780 Leptothrix cholodnii SP-6 cbb3-type cytochrome oxidase maturation protein YP_001791810.1 3062478 R 395495 CDS YP_001791811.1 171059462 6162272 complement(3062652..3065069) 1 NC_010524.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mpt:Mpe_A2479 putative cation transport P-type ATPase; heavy metal translocating P-type ATPase 3065069 6162272 Lcho_2781 Leptothrix cholodnii SP-6 heavy metal translocating P-type ATPase YP_001791811.1 3062652 R 395495 CDS YP_001791812.1 171059463 6162273 3065147..3065680 1 NC_010524.1 PFAM: protein of unknown function DUF192; KEGG: mpt:Mpe_A2480 exported protein; hypothetical protein 3065680 6162273 Lcho_2782 Leptothrix cholodnii SP-6 hypothetical protein YP_001791812.1 3065147 D 395495 CDS YP_001791813.1 171059464 6162247 3065809..3066600 1 NC_010524.1 PFAM: protein of unknown function DUF81; KEGG: mpt:Mpe_A1504 hypothetical protein; hypothetical protein 3066600 6162247 Lcho_2783 Leptothrix cholodnii SP-6 hypothetical protein YP_001791813.1 3065809 D 395495 CDS YP_001791814.1 171059465 6162248 3066674..3068380 1 NC_010524.1 PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: mpt:Mpe_A1503 putative nitrite/sulfite reductase; sulfite reductase 3068380 6162248 Lcho_2784 Leptothrix cholodnii SP-6 sulfite reductase YP_001791814.1 3066674 D 395495 CDS YP_001791815.1 171059466 6162249 3068404..3068940 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A1502 hypothetical protein; hypothetical protein 3068940 6162249 Lcho_2785 Leptothrix cholodnii SP-6 hypothetical protein YP_001791815.1 3068404 D 395495 CDS YP_001791816.1 171059467 6162250 3068937..3069671 1 NC_010524.1 KEGG: mpt:Mpe_A1501 phosphoadenylyl-sulfate reductase (thioredoxin); TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase; adenylylsulfate reductase 3069671 6162250 Lcho_2786 Leptothrix cholodnii SP-6 adenylylsulfate reductase YP_001791816.1 3068937 D 395495 CDS YP_001791817.1 171059468 6162251 3069714..3070685 1 NC_010524.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 3070685 6162251 Lcho_2787 Leptothrix cholodnii SP-6 sulfate adenylyltransferase subunit 2 YP_001791817.1 3069714 D 395495 CDS YP_001791818.1 171059469 6162252 3070770..3072092 1 NC_010524.1 KEGG: mpt:Mpe_A1499 sulfate adenylyltransferase; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; sulfate adenylyltransferase large subunit 3072092 6162252 Lcho_2788 Leptothrix cholodnii SP-6 sulfate adenylyltransferase large subunit YP_001791818.1 3070770 D 395495 CDS YP_001791819.1 171059470 6162253 3072098..3072820 1 NC_010524.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mpt:Mpe_A1498 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 3072820 6162253 Lcho_2789 Leptothrix cholodnii SP-6 uroporphyrin-III C-methyltransferase YP_001791819.1 3072098 D 395495 CDS YP_001791820.1 171059471 6162196 3072945..3073268 1 NC_010524.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mpt:Mpe_A1497 ferredoxin; 4Fe-4S ferredoxin 3073268 6162196 Lcho_2790 Leptothrix cholodnii SP-6 4Fe-4S ferredoxin YP_001791820.1 3072945 D 395495 CDS YP_001791821.1 171059472 6162197 3073336..3074442 1 NC_010524.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dac:Daci_4658 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3074442 6162197 Lcho_2791 Leptothrix cholodnii SP-6 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001791821.1 3073336 D 395495 CDS YP_001791822.1 171059473 6162198 3074516..3076750 1 NC_010524.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: dac:Daci_0735 PAS/PAC sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 3076750 6162198 Lcho_2792 Leptothrix cholodnii SP-6 PAS/PAC sensor signal transduction histidine kinase YP_001791822.1 3074516 D 395495 CDS YP_001791823.1 171059474 6162200 3077154..3077783 1 NC_010524.1 PFAM: Dual specificity protein phosphatase; SMART: Protein-tyrosine phosphatase, catalytic; KEGG: rpe:RPE_4503 ADP-ribosylation/crystallin J1; dual specificity protein phosphatase 3077783 6162200 Lcho_2793 Leptothrix cholodnii SP-6 dual specificity protein phosphatase YP_001791823.1 3077154 D 395495 CDS YP_001791824.1 171059475 6162201 3078022..3080241 1 NC_010524.1 KEGG: bbr:BB1386 hypothetical protein; hypothetical protein 3080241 6162201 Lcho_2794 Leptothrix cholodnii SP-6 hypothetical protein YP_001791824.1 3078022 D 395495 CDS YP_001791825.1 171059476 6161921 3080262..3081041 1 NC_010524.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbr:BB1383 enoyl-(acyl carrier protein) reductase; short-chain dehydrogenase/reductase SDR 3081041 6161921 Lcho_2795 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001791825.1 3080262 D 395495 CDS YP_001791826.1 171059477 6161922 3081053..3081325 1 NC_010524.1 hypothetical protein 3081325 6161922 Lcho_2796 Leptothrix cholodnii SP-6 hypothetical protein YP_001791826.1 3081053 D 395495 CDS YP_001791827.1 171059478 6161923 3081369..3082778 1 NC_010524.1 PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: rfr:Rfer_2974 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 3082778 6161923 Lcho_2797 Leptothrix cholodnii SP-6 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase YP_001791827.1 3081369 D 395495 CDS YP_001791828.1 171059479 6161924 3082775..3084025 1 NC_010524.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: rfr:Rfer_2975 acetate kinase; acetate kinase 3084025 6161924 Lcho_2798 Leptothrix cholodnii SP-6 acetate kinase YP_001791828.1 3082775 D 395495 CDS YP_001791829.1 171059480 6161925 complement(3084063..3084323) 1 NC_010524.1 hypothetical protein 3084323 6161925 Lcho_2799 Leptothrix cholodnii SP-6 hypothetical protein YP_001791829.1 3084063 R 395495 CDS YP_001791830.1 171059481 6161926 3084504..3085088 1 NC_010524.1 PFAM: nuclease (SNase domain protein); KEGG: nmu:Nmul_A2003 nuclease (SNase-like); nuclease 3085088 6161926 Lcho_2800 Leptothrix cholodnii SP-6 nuclease YP_001791830.1 3084504 D 395495 CDS YP_001791831.1 171059482 6161927 3085190..3086611 1 NC_010524.1 PFAM: Ethanolamine ammonia lyase large subunit; KEGG: mpt:Mpe_A2417 putative ethanolamine ammonia-lyase heavy chain protein; ethanolamine ammonia lyase large subunit 3086611 6161927 Lcho_2801 Leptothrix cholodnii SP-6 ethanolamine ammonia lyase large subunit YP_001791831.1 3085190 D 395495 CDS YP_001791832.1 171059483 6161915 3086608..3087468 1 NC_010524.1 PFAM: Ethanolamine ammonia-lyase light chain; KEGG: pna:Pnap_2627 ethanolamine ammonia-lyase; ethanolamine ammonia-lyase 3087468 6161915 Lcho_2802 Leptothrix cholodnii SP-6 ethanolamine ammonia-lyase YP_001791832.1 3086608 D 395495 CDS YP_001791833.1 171059484 6161916 complement(3087454..3087750) 1 NC_010524.1 KEGG: dac:Daci_4071 histone family protein nucleoid-structuring protein H-NS; hypothetical protein 3087750 6161916 Lcho_2803 Leptothrix cholodnii SP-6 hypothetical protein YP_001791833.1 3087454 R 395495 CDS YP_001791834.1 171059485 6161918 complement(3088245..3090041) 1 NC_010524.1 PFAM: Metal-dependent hydrolase HDOD; SMART: serine/threonine protein kinase; KEGG: mpt:Mpe_A2971 serine/threonine protein kinase-like protein; serine/threonine protein kinase 3090041 6161918 Lcho_2804 Leptothrix cholodnii SP-6 serine/threonine protein kinase YP_001791834.1 3088245 R 395495 CDS YP_001791835.1 171059486 6161919 3090251..3090580 1 NC_010524.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mpt:Mpe_A1283 thioredoxin 1; thioredoxin 3090580 6161919 Lcho_2805 Leptothrix cholodnii SP-6 thioredoxin YP_001791835.1 3090251 D 395495 CDS YP_001791836.1 171059487 6161920 3090832..3092094 1 NC_010524.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 3092094 rho 6161920 rho Leptothrix cholodnii SP-6 transcription termination factor Rho YP_001791836.1 3090832 D 395495 CDS YP_001791837.1 171059488 6161848 3092229..3092486 1 NC_010524.1 PFAM: ribosomal protein L31; KEGG: mpt:Mpe_A1281 putative ribosomal protein L31; 50S ribosomal protein L31 3092486 6161848 Lcho_2807 Leptothrix cholodnii SP-6 50S ribosomal protein L31 YP_001791837.1 3092229 D 395495 CDS YP_001791838.1 171059489 6161849 3092672..3094285 1 NC_010524.1 KEGG: mpt:Mpe_A1280 hypothetical protein; hypothetical protein 3094285 6161849 Lcho_2808 Leptothrix cholodnii SP-6 hypothetical protein YP_001791838.1 3092672 D 395495 CDS YP_001791839.1 171059490 6161850 complement(3094303..3095640) 1 NC_010524.1 KEGG: mpt:Mpe_A1278 putative phosphate regulon two-component system sensor kinase; TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 3095640 6161850 Lcho_2809 Leptothrix cholodnii SP-6 PAS/PAC sensor signal transduction histidine kinase YP_001791839.1 3094303 R 395495 CDS YP_001791840.1 171059491 6161851 complement(3095755..3096459) 1 NC_010524.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: mpt:Mpe_A1276 putative phosphate transport system protein; phosphate uptake regulator PhoU 3096459 6161851 Lcho_2810 Leptothrix cholodnii SP-6 phosphate uptake regulator PhoU YP_001791840.1 3095755 R 395495 CDS YP_001791841.1 171059492 6161852 complement(3096489..3097274) 1 NC_010524.1 KEGG: mpt:Mpe_A1275 phosphate transport ATP-binding protein; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase 3097274 6161852 Lcho_2811 Leptothrix cholodnii SP-6 phosphate ABC transporter ATPase YP_001791841.1 3096489 R 395495 CDS YP_001791842.1 171059493 6161853 complement(3097291..3098157) 1 NC_010524.1 Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA 3098157 pstA 6161853 pstA Leptothrix cholodnii SP-6 phosphate transporter permease subunit PtsA YP_001791842.1 3097291 R 395495 CDS YP_001791843.1 171059494 6161854 complement(3098157..3099125) 1 NC_010524.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A1273 phosphate transport system permease protein; phosphate ABC transporter permease 3099125 6161854 Lcho_2813 Leptothrix cholodnii SP-6 phosphate ABC transporter permease YP_001791843.1 3098157 R 395495 CDS YP_001791844.1 171059495 6161655 complement(3099195..3100247) 1 NC_010524.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mpt:Mpe_A1272 putative phosphate-binding periplasmic (pbp) ABC transporter protein; phosphate ABC transporter substrate-binding protein 3100247 6161655 Lcho_2814 Leptothrix cholodnii SP-6 phosphate ABC transporter substrate-binding protein YP_001791844.1 3099195 R 395495 CDS YP_001791845.1 171059496 6161656 complement(3100393..3101727) 1 NC_010524.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 3101727 glmM 6161656 glmM Leptothrix cholodnii SP-6 phosphoglucosamine mutase YP_001791845.1 3100393 R 395495 CDS YP_001791846.1 171059497 6161657 complement(3101795..3102622) 1 NC_010524.1 KEGG: mpt:Mpe_A1269 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 3102622 6161657 Lcho_2816 Leptothrix cholodnii SP-6 dihydropteroate synthase YP_001791846.1 3101795 R 395495 CDS YP_001791847.1 171059498 6161658 complement(3102722..3104626) 1 NC_010524.1 KEGG: mpt:Mpe_A1268 vesicle-fusing ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 3104626 6161658 Lcho_2817 Leptothrix cholodnii SP-6 ATP-dependent metalloprotease FtsH YP_001791847.1 3102722 R 395495 CDS YP_001791848.1 171059499 6161659 complement(3104792..3105490) 1 NC_010524.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: mpt:Mpe_A1267 putative ribosomal RNA large subunit methyltransferase J; ribosomal RNA methyltransferase RrmJ/FtsJ 3105490 6161659 Lcho_2818 Leptothrix cholodnii SP-6 ribosomal RNA methyltransferase RrmJ/FtsJ YP_001791848.1 3104792 R 395495 CDS YP_001791849.1 171059500 6161660 3105586..3105993 1 NC_010524.1 PFAM: protein of unknown function UPF0044; KEGG: mpt:Mpe_A1266 hypothetical protein; hypothetical protein 3105993 6161660 Lcho_2819 Leptothrix cholodnii SP-6 hypothetical protein YP_001791849.1 3105586 D 395495 CDS YP_001791850.1 171059501 6161661 complement(3106037..3106492) 1 NC_010524.1 KEGG: mpt:Mpe_A1264 hypothetical protein; hypothetical protein 3106492 6161661 Lcho_2820 Leptothrix cholodnii SP-6 hypothetical protein YP_001791850.1 3106037 R 395495 CDS YP_001791851.1 171059502 6161628 complement(3106504..3106980) 1 NC_010524.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: aav:Aave_2612 transcription elongation factor GreA; transcription elongation factor GreA 3106980 6161628 Lcho_2821 Leptothrix cholodnii SP-6 transcription elongation factor GreA YP_001791851.1 3106504 R 395495 CDS YP_001791852.1 171059503 6161629 complement(3107075..3110350) 1 NC_010524.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: mpt:Mpe_A1262 putative carbamoyl-phosphate synthase (large chain) protein; carbamoyl-phosphate synthase large subunit 3110350 6161629 Lcho_2822 Leptothrix cholodnii SP-6 carbamoyl-phosphate synthase large subunit YP_001791852.1 3107075 R 395495 CDS YP_001791853.1 171059504 6161630 complement(3110343..3111527) 1 NC_010524.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: pol:Bpro_2679 carbamoyl phosphate synthase small subunit; carbamoyl-phosphate synthase small subunit 3111527 6161630 Lcho_2823 Leptothrix cholodnii SP-6 carbamoyl-phosphate synthase small subunit YP_001791853.1 3110343 R 395495 CDS YP_001791854.1 171059505 6161631 complement(3111738..3112145) 1 NC_010524.1 PFAM: protein of unknown function DUF336; KEGG: mpt:Mpe_A1258 hypothetical protein; hypothetical protein 3112145 6161631 Lcho_2824 Leptothrix cholodnii SP-6 hypothetical protein YP_001791854.1 3111738 R 395495 CDS YP_001791855.1 171059506 6161632 3112327..3113022 1 NC_010524.1 PFAM: protein of unknown function UPF0005; KEGG: ajs:Ajs_2411 protein of unknown function UPF0005; hypothetical protein 3113022 6161632 Lcho_2825 Leptothrix cholodnii SP-6 hypothetical protein YP_001791855.1 3112327 D 395495 CDS YP_001791856.1 171059507 6161633 complement(3113110..3114531) 1 NC_010524.1 KEGG: mpt:Mpe_A1530 putative replicative DNA helicase protein; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; replicative DNA helicase 3114531 6161633 Lcho_2826 Leptothrix cholodnii SP-6 replicative DNA helicase YP_001791856.1 3113110 R 395495 CDS YP_001791857.1 171059508 6161634 complement(3114710..3115162) 1 NC_010524.1 PFAM: ribosomal protein L9; KEGG: mpt:Mpe_A1529 50S ribosomal protein L9; 50S ribosomal protein L9 3115162 6161634 Lcho_2827 Leptothrix cholodnii SP-6 50S ribosomal protein L9 YP_001791857.1 3114710 R 395495 CDS YP_001791858.1 171059509 6161582 complement(3115174..3115458) 1 NC_010524.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 3115458 rpsR 6161582 rpsR Leptothrix cholodnii SP-6 30S ribosomal protein S18 YP_001791858.1 3115174 R 395495 CDS YP_001791859.1 171059510 6161583 complement(3115469..3115777) 1 NC_010524.1 KEGG: mpt:Mpe_A1527 primosomal replication protein N; primosomal replication protein N 3115777 6161583 Lcho_2829 Leptothrix cholodnii SP-6 primosomal replication protein N YP_001791859.1 3115469 R 395495 CDS YP_001791860.1 171059511 6161584 complement(3115822..3116187) 1 NC_010524.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 3116187 rpsF 6161584 rpsF Leptothrix cholodnii SP-6 30S ribosomal protein S6 YP_001791860.1 3115822 R 395495 CDS YP_001791861.1 171059512 6161585 complement(3116304..3118415) 1 NC_010524.1 PFAM: Na+/solute symporter; KEGG: mpt:Mpe_A0866 putative membrane transport protein; Na+/solute symporter 3118415 6161585 Lcho_2831 Leptothrix cholodnii SP-6 Na+/solute symporter YP_001791861.1 3116304 R 395495 CDS YP_001791862.1 171059513 6161586 complement(3118433..3118705) 1 NC_010524.1 KEGG: eba:ebA828 predicted membrane protein; hypothetical protein 3118705 6161586 Lcho_2832 Leptothrix cholodnii SP-6 hypothetical protein YP_001791862.1 3118433 R 395495 CDS YP_001791863.1 171059514 6161587 complement(3118851..3121247) 1 NC_010524.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 3121247 6161587 Lcho_2833 Leptothrix cholodnii SP-6 phosphoenolpyruvate synthase YP_001791863.1 3118851 R 395495 CDS YP_001791864.1 171059515 6161588 3121446..3122267 1 NC_010524.1 PFAM: protein of unknown function DUF299; KEGG: mpt:Mpe_A1520 hypothetical protein; hypothetical protein 3122267 6161588 Lcho_2834 Leptothrix cholodnii SP-6 hypothetical protein YP_001791864.1 3121446 D 395495 CDS YP_001791865.1 171059516 6163103 complement(3122296..3123129) 1 NC_010524.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mpt:Mpe_A1965 putative tRNA/rRNA methyltransferase protein; tRNA/rRNA methyltransferase SpoU 3123129 6163103 Lcho_2835 Leptothrix cholodnii SP-6 tRNA/rRNA methyltransferase SpoU YP_001791865.1 3122296 R 395495 CDS YP_001791866.1 171059517 6163104 complement(3123129..3123785) 1 NC_010524.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 3123785 rnhB 6163104 rnhB Leptothrix cholodnii SP-6 ribonuclease HII YP_001791866.1 3123129 R 395495 CDS YP_001791867.1 171059518 6163105 complement(3123757..3124902) 1 NC_010524.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 3124902 lpxB 6163105 lpxB Leptothrix cholodnii SP-6 lipid-A-disaccharide synthase YP_001791867.1 3123757 R 395495 CDS YP_001791868.1 171059519 6163106 complement(3124932..3125726) 1 NC_010524.1 TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: mpt:Mpe_A1968 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 3125726 6163106 Lcho_2838 Leptothrix cholodnii SP-6 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase YP_001791868.1 3124932 R 395495 CDS YP_001791869.1 171059520 6163107 complement(3125741..3126187) 1 NC_010524.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: aav:Aave_1834 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 3126187 6163107 Lcho_2839 Leptothrix cholodnii SP-6 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YP_001791869.1 3125741 R 395495 CDS YP_001791870.1 171059521 6163108 complement(3126184..3127212) 1 NC_010524.1 TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD; KEGG: mpt:Mpe_A1969 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 3127212 6163108 Lcho_2840 Leptothrix cholodnii SP-6 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_001791870.1 3126184 R 395495 CDS YP_001791871.1 171059522 6163109 complement(3127283..3127807) 1 NC_010524.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: mpt:Mpe_A1970 putative transmembrane protein; outer membrane chaperone Skp 3127807 6163109 Lcho_2841 Leptothrix cholodnii SP-6 outer membrane chaperone Skp YP_001791871.1 3127283 R 395495 CDS YP_001791872.1 171059523 6162659 complement(3127807..3130119) 1 NC_010524.1 TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: mpt:Mpe_A1971 putative outer membrane signal peptide protein; outer membrane protein assembly complex, YaeT protein 3130119 6162659 Lcho_2842 Leptothrix cholodnii SP-6 outer membrane protein assembly complex, YaeT protein YP_001791872.1 3127807 R 395495 CDS YP_001791873.1 171059524 6162660 complement(3130124..3131599) 1 NC_010524.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: mpt:Mpe_A1972 hypothetical protein; membrane-associated zinc metalloprotease 3131599 6162660 Lcho_2843 Leptothrix cholodnii SP-6 membrane-associated zinc metalloprotease YP_001791873.1 3130124 R 395495 CDS YP_001791874.1 171059525 6162661 complement(3131606..3132814) 1 NC_010524.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3132814 6162661 Lcho_2844 Leptothrix cholodnii SP-6 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_001791874.1 3131606 R 395495 CDS YP_001791875.1 171059526 6162662 complement(3132811..3133647) 1 NC_010524.1 PFAM: phosphatidate cytidylyltransferase; KEGG: mpt:Mpe_A1974 putative phosphatidate cytidylyltransferase membrane protein; phosphatidate cytidylyltransferase 3133647 6162662 Lcho_2845 Leptothrix cholodnii SP-6 phosphatidate cytidylyltransferase YP_001791875.1 3132811 R 395495 CDS YP_001791876.1 171059527 6162663 complement(3133657..3134430) 1 NC_010524.1 KEGG: mpt:Mpe_A1975 di-trans-poly-cis-decaprenylcistransferase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 3134430 6162663 Lcho_2846 Leptothrix cholodnii SP-6 undecaprenyl diphosphate synthase YP_001791876.1 3133657 R 395495 CDS YP_001791877.1 171059528 6162664 complement(3134452..3135012) 1 NC_010524.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 3135012 frr 6162664 frr Leptothrix cholodnii SP-6 ribosome recycling factor YP_001791877.1 3134452 R 395495 CDS YP_001791878.1 171059529 6162665 complement(3135055..3135765) 1 NC_010524.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 3135765 pyrH 6162665 pyrH Leptothrix cholodnii SP-6 uridylate kinase YP_001791878.1 3135055 R 395495 CDS YP_001791879.1 171059530 6162601 complement(3135854..3136774) 1 NC_010524.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 3136774 tsf 6162601 tsf Leptothrix cholodnii SP-6 elongation factor Ts YP_001791879.1 3135854 R 395495 CDS YP_001791880.1 171059531 6162602 complement(3136874..3137620) 1 NC_010524.1 PFAM: ribosomal protein S2; KEGG: mpt:Mpe_A1979 putative 30S ribosomal protein S2; 30S ribosomal protein S2 3137620 6162602 Lcho_2850 Leptothrix cholodnii SP-6 30S ribosomal protein S2 YP_001791880.1 3136874 R 395495 CDS YP_001791881.1 171059532 6162603 3137914..3139155 1 NC_010524.1 PFAM: Amidase; KEGG: mpt:Mpe_A1980 amidase; amidase 3139155 6162603 Lcho_2851 Leptothrix cholodnii SP-6 amidase YP_001791881.1 3137914 D 395495 CDS YP_001791882.1 171059533 6162604 3139155..3140522 1 NC_010524.1 PFAM: FAD dependent oxidoreductase; KEGG: mpt:Mpe_A1981 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase 3140522 6162604 Lcho_2852 Leptothrix cholodnii SP-6 D-amino-acid dehydrogenase YP_001791882.1 3139155 D 395495 CDS YP_001791883.1 171059534 6162605 3140519..3140980 1 NC_010524.1 KEGG: mpt:Mpe_A3449 hypothetical protein; hypothetical protein 3140980 6162605 Lcho_2853 Leptothrix cholodnii SP-6 hypothetical protein YP_001791883.1 3140519 D 395495 CDS YP_001791884.1 171059535 6162606 3140983..3142629 1 NC_010524.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: mpt:Mpe_A1982 hypothetical protein; carbohydrate kinase 3142629 6162606 Lcho_2854 Leptothrix cholodnii SP-6 carbohydrate kinase YP_001791884.1 3140983 D 395495 CDS YP_001791885.1 171059536 6162607 complement(3142650..3144851) 1 NC_010524.1 KEGG: mpt:Mpe_A1983 exoribonuclease II; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; SMART: Cold shock protein; ribonuclease R 3144851 6162607 Lcho_2855 Leptothrix cholodnii SP-6 ribonuclease R YP_001791885.1 3142650 R 395495 CDS YP_001791886.1 171059537 6161856 complement(3145243..3145764) 1 NC_010524.1 PFAM: phosphoribosyltransferase; KEGG: mpt:Mpe_A1984 putative transferase; phosphoribosyltransferase 3145764 6161856 Lcho_2856 Leptothrix cholodnii SP-6 phosphoribosyltransferase YP_001791886.1 3145243 R 395495 CDS YP_001791887.1 171059538 6161857 complement(3145797..3147134) 1 NC_010524.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 3147134 6161857 Lcho_2857 Leptothrix cholodnii SP-6 adenylosuccinate synthetase YP_001791887.1 3145797 R 395495 CDS YP_001791888.1 171059539 6161858 complement(3147182..3148345) 1 NC_010524.1 PFAM: tRNA synthetase class II (G H P and S); KEGG: mpt:Mpe_A1986 ATP phosphoribosyltransferase regulatory subunit; tRNA synthetase class II (G H P and S) 3148345 6161858 Lcho_2858 Leptothrix cholodnii SP-6 tRNA synthetase class II (G H P and S) YP_001791888.1 3147182 R 395495 CDS YP_001791889.1 171059540 6161859 complement(3148402..3148590) 1 NC_010524.1 KEGG: mpt:Mpe_A1987 hypothetical protein; hypothetical protein 3148590 6161859 Lcho_2859 Leptothrix cholodnii SP-6 hypothetical protein YP_001791889.1 3148402 R 395495 CDS YP_001791890.1 171059541 6161860 complement(3148601..3149488) 1 NC_010524.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: mpt:Mpe_A1988 putative serine protease transmembrane protein; HflC protein 3149488 6161860 Lcho_2860 Leptothrix cholodnii SP-6 HflC protein YP_001791890.1 3148601 R 395495 CDS YP_001791891.1 171059542 6159962 complement(3149506..3150687) 1 NC_010524.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: mpt:Mpe_A1989 hypothetical protein; HflK protein 3150687 6159962 Lcho_2861 Leptothrix cholodnii SP-6 HflK protein YP_001791891.1 3149506 R 395495 CDS YP_001791892.1 171059543 6159963 complement(3150833..3152071) 1 NC_010524.1 TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: mpt:Mpe_A1990 putative GTP-binding protein; GTP-binding proten HflX 3152071 6159963 Lcho_2862 Leptothrix cholodnii SP-6 GTP-binding proten HflX YP_001791892.1 3150833 R 395495 CDS YP_001791893.1 171059544 6159964 complement(3152113..3152355) 1 NC_010524.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: mpt:Mpe_A1991 putative host factor-I protein; RNA chaperone Hfq 3152355 6159964 Lcho_2863 Leptothrix cholodnii SP-6 RNA chaperone Hfq YP_001791893.1 3152113 R 395495 CDS YP_001791894.1 171059545 6159965 complement(3152425..3153771) 1 NC_010524.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 3153771 engA 6159965 engA Leptothrix cholodnii SP-6 GTP-binding protein EngA YP_001791894.1 3152425 R 395495 CDS YP_001791895.1 171059546 6159966 complement(3153805..3154968) 1 NC_010524.1 TIGRFAM: outer membrane assembly lipoprotein YfgL; SMART: Pyrrolo-quinoline quinone; KEGG: mpt:Mpe_A1993 hypothetical protein; outer membrane assembly lipoprotein YfgL 3154968 6159966 Lcho_2865 Leptothrix cholodnii SP-6 outer membrane assembly lipoprotein YfgL YP_001791895.1 3153805 R 395495 CDS YP_001791896.1 171059547 6159967 complement(3154965..3155639) 1 NC_010524.1 KEGG: mpt:Mpe_A1994 hypothetical protein; hypothetical protein 3155639 6159967 Lcho_2866 Leptothrix cholodnii SP-6 hypothetical protein YP_001791896.1 3154965 R 395495 CDS YP_001791897.1 171059548 6159968 complement(3155776..3157077) 1 NC_010524.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 3157077 hisS 6159968 hisS Leptothrix cholodnii SP-6 histidyl-tRNA synthetase YP_001791897.1 3155776 R 395495 CDS YP_001791898.1 171059549 6159743 complement(3157147..3158439) 1 NC_010524.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 3158439 ispG 6159743 ispG Leptothrix cholodnii SP-6 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_001791898.1 3157147 R 395495 CDS YP_001791899.1 171059550 6159744 complement(3158448..3159347) 1 NC_010524.1 KEGG: mpt:Mpe_A1997 hypothetical protein; hypothetical protein 3159347 6159744 Lcho_2869 Leptothrix cholodnii SP-6 hypothetical protein YP_001791899.1 3158448 R 395495 CDS YP_001791900.1 171059551 6159745 complement(3159340..3160260) 1 NC_010524.1 KEGG: mpt:Mpe_A1998 uncharacterized protein involved in fimbrial biogenesis; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; type IV pilus biogenesis/stability protein PilW 3160260 6159745 Lcho_2870 Leptothrix cholodnii SP-6 type IV pilus biogenesis/stability protein PilW YP_001791900.1 3159340 R 395495 CDS YP_001791901.1 171059552 6159746 complement(3160321..3161502) 1 NC_010524.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: mpt:Mpe_A1999 hypothetical protein; radical SAM protein 3161502 6159746 Lcho_2871 Leptothrix cholodnii SP-6 radical SAM protein YP_001791901.1 3160321 R 395495 CDS YP_001791902.1 171059553 6159747 complement(3161584..3162009) 1 NC_010524.1 PFAM: nucleoside diphosphate kinase; KEGG: mpt:Mpe_A2000 nucleoside diphosphate kinase; nucleoside-diphosphate kinase 3162009 6159747 Lcho_2872 Leptothrix cholodnii SP-6 nucleoside-diphosphate kinase YP_001791902.1 3161584 R 395495 CDS YP_001791903.1 171059554 6159748 complement(3162128..3164338) 1 NC_010524.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mpt:Mpe_A2001 ribosomal large subunit pseudouridine synthase B; pseudouridine synthase 3164338 6159748 Lcho_2873 Leptothrix cholodnii SP-6 pseudouridine synthase YP_001791903.1 3162128 R 395495 CDS YP_001791904.1 171059555 6159749 complement(3164349..3164969) 1 NC_010524.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: mpt:Mpe_A2002 putative segregation and condensation protein B; segregation and condensation protein B 3164969 6159749 Lcho_2874 Leptothrix cholodnii SP-6 segregation and condensation protein B YP_001791904.1 3164349 R 395495 CDS YP_001791905.1 171059556 6159848 complement(3165278..3166387) 1 NC_010524.1 KEGG: mpt:Mpe_A2003 putative ribosomal large subunit pseudouridine synthase D protein; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 3166387 6159848 Lcho_2875 Leptothrix cholodnii SP-6 RluA family pseudouridine synthase YP_001791905.1 3165278 R 395495 CDS YP_001791906.1 171059557 6159849 3166400..3167254 1 NC_010524.1 KEGG: mpt:Mpe_A2004 putative transmembrane protein; putative transmembrane protein 3167254 6159849 Lcho_2876 Leptothrix cholodnii SP-6 putative transmembrane protein YP_001791906.1 3166400 D 395495 CDS YP_001791907.1 171059558 6159850 complement(3167264..3169240) 1 NC_010524.1 SMART: helicase c2; DEAD-like helicases; KEGG: mpt:Mpe_A2005 putative ATP-dependent DNA helicase-related protein; helicase c2 3169240 6159850 Lcho_2877 Leptothrix cholodnii SP-6 helicase c2 YP_001791907.1 3167264 R 395495 CDS YP_001791908.1 171059559 6159851 complement(3169237..3169440) 1 NC_010524.1 PFAM: protein of unknown function DUF465; KEGG: mpt:Mpe_A2006 hypothetical protein; hypothetical protein 3169440 6159851 Lcho_2878 Leptothrix cholodnii SP-6 hypothetical protein YP_001791908.1 3169237 R 395495 CDS YP_001791909.1 171059560 6159852 3169494..3170261 1 NC_010524.1 SMART: protein phosphatase 2C domain protein; KEGG: mpt:Mpe_A2007 hypothetical protein; protein serine/threonine phosphatase 3170261 6159852 Lcho_2879 Leptothrix cholodnii SP-6 protein serine/threonine phosphatase YP_001791909.1 3169494 D 395495 CDS YP_001791910.1 171059561 6159853 complement(3170310..3171410) 1 NC_010524.1 PFAM: AFG1-family ATPase; KEGG: mpt:Mpe_A2009 hypothetical protein; AFG1 family ATPase 3171410 6159853 Lcho_2880 Leptothrix cholodnii SP-6 AFG1 family ATPase YP_001791910.1 3170310 R 395495 CDS YP_001791911.1 171059562 6159854 complement(3171493..3172920) 1 NC_010524.1 E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 3172920 6159854 Lcho_2881 Leptothrix cholodnii SP-6 dihydrolipoamide dehydrogenase YP_001791911.1 3171493 R 395495 CDS YP_001791912.1 171059563 6160153 complement(3172943..3173287) 1 NC_010524.1 PFAM: PspC domain protein; KEGG: sat:SYN_00293 transcriptional regulator-like protein; phage shock protein C 3173287 6160153 Lcho_2882 Leptothrix cholodnii SP-6 phage shock protein C YP_001791912.1 3172943 R 395495 CDS YP_001791913.1 171059564 6160154 complement(3173344..3174585) 1 NC_010524.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: ajs:Ajs_1823 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 3174585 6160154 Lcho_2883 Leptothrix cholodnii SP-6 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_001791913.1 3173344 R 395495 CDS YP_001791914.1 171059565 6160155 complement(3174696..3177548) 1 NC_010524.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 3177548 sucA 6160155 sucA Leptothrix cholodnii SP-6 2-oxoglutarate dehydrogenase E1 component YP_001791914.1 3174696 R 395495 CDS YP_001791915.1 171059566 6160156 complement(3177810..3178823) 1 NC_010524.1 KEGG: nmu:Nmul_A2461 hypothetical protein; hypothetical protein 3178823 6160156 Lcho_2885 Leptothrix cholodnii SP-6 hypothetical protein YP_001791915.1 3177810 R 395495 CDS YP_001791916.1 171059567 6160157 3179128..3179898 1 NC_010524.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: mpt:Mpe_A2099 putative transcription regulator protein; IclR family transcriptional regulator 3179898 6160157 Lcho_2886 Leptothrix cholodnii SP-6 IclR family transcriptional regulator YP_001791916.1 3179128 D 395495 CDS YP_001791917.1 171059568 6160158 complement(3179917..3180888) 1 NC_010524.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: mpt:Mpe_A2100 serine-type D-Ala-D-Ala carboxypeptidase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 3180888 6160158 Lcho_2887 Leptothrix cholodnii SP-6 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 YP_001791917.1 3179917 R 395495 CDS YP_001791918.1 171059569 6160159 complement(3181121..3182662) 1 NC_010524.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 3182662 6160159 Lcho_2888 Leptothrix cholodnii SP-6 2-isopropylmalate synthase YP_001791918.1 3181121 R 395495 CDS YP_001791919.1 171059570 6160201 complement(3182674..3184389) 1 NC_010524.1 KEGG: pol:Bpro_2321 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; 2-isopropylmalate synthase 3184389 6160201 Lcho_2889 Leptothrix cholodnii SP-6 2-isopropylmalate synthase YP_001791919.1 3182674 R 395495 CDS YP_001791920.1 171059571 6160202 complement(3184635..3185477) 1 NC_010524.1 TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mpt:Mpe_A2102 CDP-diacylglycerol--serine O-phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase 3185477 6160202 Lcho_2890 Leptothrix cholodnii SP-6 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_001791920.1 3184635 R 395495 CDS YP_001791921.1 171059572 6160203 complement(3185603..3186619) 1 NC_010524.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 3186619 6160203 Lcho_2891 Leptothrix cholodnii SP-6 ketol-acid reductoisomerase YP_001791921.1 3185603 R 395495 CDS YP_001791922.1 171059573 6160204 complement(3186786..3187277) 1 NC_010524.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 3187277 ilvH 6160204 ilvH Leptothrix cholodnii SP-6 acetolactate synthase 3 regulatory subunit YP_001791922.1 3186786 R 395495 CDS YP_001791923.1 171059574 6160205 complement(3187432..3189210) 1 NC_010524.1 acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase 3 catalytic subunit 3189210 6160205 Lcho_2893 Leptothrix cholodnii SP-6 acetolactate synthase 3 catalytic subunit YP_001791923.1 3187432 R 395495 CDS YP_001791924.1 171059575 6160206 3189500..3190066 1 NC_010524.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mpt:Mpe_A2106 putative RNA polymerase sigma factor transcription regulator protein; ECF subfamily RNA polymerase sigma-24 factor 3190066 6160206 Lcho_2894 Leptothrix cholodnii SP-6 ECF subfamily RNA polymerase sigma-24 factor YP_001791924.1 3189500 D 395495 CDS YP_001791925.1 171059576 6160207 3190063..3190554 1 NC_010524.1 KEGG: ajs:Ajs_1767 putative transmembrane protein; putative transmembrane protein 3190554 6160207 Lcho_2895 Leptothrix cholodnii SP-6 putative transmembrane protein YP_001791925.1 3190063 D 395495 CDS YP_001791926.1 171059577 6160077 3190617..3191309 1 NC_010524.1 KEGG: mpt:Mpe_A2108 hypothetical protein; hypothetical protein 3191309 6160077 Lcho_2896 Leptothrix cholodnii SP-6 hypothetical protein YP_001791926.1 3190617 D 395495 CDS YP_001791927.1 171059578 6160078 3191306..3191866 1 NC_010524.1 PFAM: RDD domain containing protein; KEGG: mpt:Mpe_A2109 hypothetical protein; RDD domain-containing protein 3191866 6160078 Lcho_2897 Leptothrix cholodnii SP-6 RDD domain-containing protein YP_001791927.1 3191306 D 395495 CDS YP_001791928.1 171059579 6160079 3191914..3192294 1 NC_010524.1 PFAM: diacylglycerol kinase; KEGG: mpt:Mpe_A2110 diacylglycerol kinase; diacylglycerol kinase 3192294 6160079 Lcho_2898 Leptothrix cholodnii SP-6 diacylglycerol kinase YP_001791928.1 3191914 D 395495 CDS YP_001791929.1 171059580 6160080 complement(3192371..3192709) 1 NC_010524.1 PFAM: nitrogen regulatory protein P-II; KEGG: mpt:Mpe_A2112 putative nitrogen regulatory p-II transcription regulator protein; nitrogen regulatory protein P-II 3192709 6160080 Lcho_2899 Leptothrix cholodnii SP-6 nitrogen regulatory protein P-II YP_001791929.1 3192371 R 395495 CDS YP_001791930.1 171059581 6160081 complement(3192818..3194482) 1 NC_010524.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 3194482 6160081 Lcho_2900 Leptothrix cholodnii SP-6 putative ABC transporter ATP-binding protein YP_001791930.1 3192818 R 395495 CDS YP_001791931.1 171059582 6160082 3194692..3195540 1 NC_010524.1 KEGG: bbr:BB3086 hypothetical protein; hypothetical protein 3195540 6160082 Lcho_2901 Leptothrix cholodnii SP-6 hypothetical protein YP_001791931.1 3194692 D 395495 CDS YP_001791932.1 171059583 6160083 3195513..3197156 1 NC_010524.1 KEGG: mpt:Mpe_A1533 hypothetical protein; hypothetical protein 3197156 6160083 Lcho_2902 Leptothrix cholodnii SP-6 hypothetical protein YP_001791932.1 3195513 D 395495 CDS YP_001791933.1 171059584 6160233 3197161..3200490 1 NC_010524.1 KEGG: mpt:Mpe_A1532 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 3200490 6160233 Lcho_2903 Leptothrix cholodnii SP-6 DNA polymerase III subunit alpha YP_001791933.1 3197161 D 395495 CDS YP_001791934.1 171059585 6160234 3200674..3201180 1 NC_010524.1 KEGG: har:HEAR3117 putative type 4 fimbrial biogenesis transmembrane protein; putative type 4 fimbrial biogenesis transmembrane protein 3201180 6160234 Lcho_2904 Leptothrix cholodnii SP-6 putative type 4 fimbrial biogenesis transmembrane protein YP_001791934.1 3200674 D 395495 CDS YP_001791935.1 171059586 6160235 3201174..3201812 1 NC_010524.1 KEGG: mfa:Mfla_2522 methylation; Tfp pilus assembly protein FimT 3201812 6160235 Lcho_2905 Leptothrix cholodnii SP-6 Tfp pilus assembly protein FimT YP_001791935.1 3201174 D 395495 CDS YP_001791936.1 171059587 6160236 3201857..3202276 1 NC_010524.1 KEGG: dar:Daro_3039 hypothetical protein; hypothetical protein 3202276 6160236 Lcho_2906 Leptothrix cholodnii SP-6 hypothetical protein YP_001791936.1 3201857 D 395495 CDS YP_001791937.1 171059588 6160237 3202286..3203452 1 NC_010524.1 KEGG: mms:mma_3357 type IV pilus assembly protein PilW; type IV pilus assembly protein PilW 3203452 6160237 Lcho_2907 Leptothrix cholodnii SP-6 type IV pilus assembly protein PilW YP_001791937.1 3202286 D 395495 CDS YP_001791938.1 171059589 6160238 3203463..3204140 1 NC_010524.1 KEGG: mms:mma_3356 type IV pilus assembly protein PilX; type IV pilus assembly protein PilX 3204140 6160238 Lcho_2908 Leptothrix cholodnii SP-6 type IV pilus assembly protein PilX YP_001791938.1 3203463 D 395495 CDS YP_001791939.1 171059590 6160239 3204161..3208090 1 NC_010524.1 KEGG: mms:mma_3355 type IV fimbrial biogenesis protein PilY1; type IV fimbrial biogenesis protein PilY1 3208090 6160239 Lcho_2909 Leptothrix cholodnii SP-6 type IV fimbrial biogenesis protein PilY1 YP_001791939.1 3204161 D 395495 CDS YP_001791940.1 171059591 6159993 3208096..3208881 1 NC_010524.1 TIGRFAM: TonB family protein; KEGG: tbd:Tbd_2268 TonB domain protein; TonB family protein 3208881 6159993 Lcho_2910 Leptothrix cholodnii SP-6 TonB family protein YP_001791940.1 3208096 D 395495 CDS YP_001791941.1 171059592 6159994 complement(3208901..3209836) 1 NC_010524.1 PFAM: histone deacetylase superfamily; KEGG: mpt:Mpe_A1246 putative histone deacetylase-family protein; histone deacetylase superfamily protein 3209836 6159994 Lcho_2911 Leptothrix cholodnii SP-6 histone deacetylase superfamily protein YP_001791941.1 3208901 R 395495 CDS YP_001791942.1 171059593 6159995 3209889..3210938 1 NC_010524.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: mpt:Mpe_A1245 putative MoxR like protein; ATPase 3210938 6159995 Lcho_2912 Leptothrix cholodnii SP-6 ATPase YP_001791942.1 3209889 D 395495 CDS YP_001791943.1 171059594 6159996 3210938..3212026 1 NC_010524.1 PFAM: protein of unknown function DUF58; KEGG: mpt:Mpe_A1244 hypothetical protein; hypothetical protein 3212026 6159996 Lcho_2913 Leptothrix cholodnii SP-6 hypothetical protein YP_001791943.1 3210938 D 395495 CDS YP_001791944.1 171059595 6159997 3212028..3214148 1 NC_010524.1 PFAM: transglutaminase domain protein; KEGG: mpt:Mpe_A1243 hypothetical protein; transglutaminase domain-containing protein 3214148 6159997 Lcho_2914 Leptothrix cholodnii SP-6 transglutaminase domain-containing protein YP_001791944.1 3212028 D 395495 CDS YP_001791945.1 171059596 6159998 3214160..3214558 1 NC_010524.1 KEGG: mpt:Mpe_A2925 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase 3214558 6159998 Lcho_2915 Leptothrix cholodnii SP-6 lactoylglutathione lyase YP_001791945.1 3214160 D 395495 CDS YP_001791946.1 171059597 6159999 3214600..3218949 1 NC_010524.1 KEGG: reh:H16_A0562 superfamily II DNA/RNA helicase, SNF2 family; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases; non-specific serine/threonine protein kinase 3218949 6159999 Lcho_2916 Leptothrix cholodnii SP-6 non-specific serine/threonine protein kinase YP_001791946.1 3214600 D 395495 CDS YP_001791947.1 171059598 6160257 3218996..3220726 1 NC_010524.1 KEGG: mms:mma_0535 ABC-type multidrug transport system, ATPase and permease components; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA 3220726 6160257 Lcho_2917 Leptothrix cholodnii SP-6 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA YP_001791947.1 3218996 D 395495 CDS YP_001791948.1 171059599 6160258 complement(3220795..3221418) 1 NC_010524.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: mfa:Mfla_0760 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 3221418 6160258 Lcho_2918 Leptothrix cholodnii SP-6 2-dehydro-3-deoxyphosphogluconate aldolase YP_001791948.1 3220795 R 395495 CDS YP_001791949.1 171059600 6160259 complement(3221445..3223289) 1 NC_010524.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 3223289 6160259 Lcho_2919 Leptothrix cholodnii SP-6 phosphogluconate dehydratase YP_001791949.1 3221445 R 395495 CDS YP_001791950.1 171059601 6160260 3223401..3224129 1 NC_010524.1 PFAM: ChaC family protein; KEGG: mpt:Mpe_A2926 uncharacterized protein involved in cation transport; ChaC family protein 3224129 6160260 Lcho_2920 Leptothrix cholodnii SP-6 ChaC family protein YP_001791950.1 3223401 D 395495 CDS YP_001791951.1 171059602 6160261 complement(3224083..3224733) 1 NC_010524.1 KEGG: mpt:Mpe_A2928 hypothetical protein; hypothetical protein 3224733 6160261 Lcho_2921 Leptothrix cholodnii SP-6 hypothetical protein YP_001791951.1 3224083 R 395495 CDS YP_001791952.1 171059603 6160262 3224987..3225622 1 NC_010524.1 KEGG: mpt:Mpe_A2931 pyridoxamine-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase 3225622 6160262 Lcho_2922 Leptothrix cholodnii SP-6 pyridoxamine 5'-phosphate oxidase YP_001791952.1 3224987 D 395495 CDS YP_001791953.1 171059604 6160263 complement(3225659..3226234) 1 NC_010524.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: rfr:Rfer_2598 peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase 3226234 6160263 Lcho_2923 Leptothrix cholodnii SP-6 peptide methionine sulfoxide reductase YP_001791953.1 3225659 R 395495 CDS YP_001791954.1 171059605 6160026 3226327..3227142 1 NC_010524.1 PFAM: protein of unknown function DUF218; KEGG: pna:Pnap_1132 protein of unknown function DUF218; hypothetical protein 3227142 6160026 Lcho_2924 Leptothrix cholodnii SP-6 hypothetical protein YP_001791954.1 3226327 D 395495 CDS YP_001791955.1 171059606 6160027 complement(3227454..3229028) 1 NC_010524.1 TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: mpt:Mpe_A2936 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; UbiD family decarboxylase 3229028 6160027 Lcho_2925 Leptothrix cholodnii SP-6 UbiD family decarboxylase YP_001791955.1 3227454 R 395495 CDS YP_001791956.1 171059607 6160028 3229284..3230219 1 NC_010524.1 PFAM: Lytic transglycosylase catalytic; KEGG: mpt:Mpe_A2937 hypothetical protein; lytic transglycosylase catalytic subunit 3230219 6160028 Lcho_2926 Leptothrix cholodnii SP-6 lytic transglycosylase catalytic subunit YP_001791956.1 3229284 D 395495 CDS YP_001791957.1 171059608 6160029 3230458..3231705 1 NC_010524.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 3231705 glyA 6160029 glyA Leptothrix cholodnii SP-6 serine hydroxymethyltransferase YP_001791957.1 3230458 D 395495 CDS YP_001791958.1 171059609 6160030 3231825..3232268 1 NC_010524.1 PFAM: ATP-cone domain protein; KEGG: mpt:Mpe_A2939 hypothetical protein; transcriptional regulator NrdR 3232268 nrdR 6160030 nrdR Leptothrix cholodnii SP-6 transcriptional regulator NrdR YP_001791958.1 3231825 D 395495 CDS YP_001791959.1 171059610 6160031 3232389..3232955 1 NC_010524.1 TIGRFAM: general secretion pathway protein H; KEGG: mpt:Mpe_A2940 fimbrial biogenesis protein; general secretion pathway protein H 3232955 6160031 Lcho_2929 Leptothrix cholodnii SP-6 general secretion pathway protein H YP_001791959.1 3232389 D 395495 CDS YP_001791960.1 171059611 6160032 3232949..3233398 1 NC_010524.1 KEGG: asa:ASA_0688 type IV pilus assembly protein; type IV pilus assembly protein 3233398 6160032 Lcho_2930 Leptothrix cholodnii SP-6 type IV pilus assembly protein YP_001791960.1 3232949 D 395495 CDS YP_001791961.1 171059612 6160109 3233404..3234114 1 NC_010524.1 KEGG: mpt:Mpe_A2942 fimbrial biogenesis protein; fimbrial biogenesis protein 3234114 6160109 Lcho_2931 Leptothrix cholodnii SP-6 fimbrial biogenesis protein YP_001791961.1 3233404 D 395495 CDS YP_001791962.1 171059613 6160110 3234095..3235369 1 NC_010524.1 KEGG: mpt:Mpe_A2943 fimbrial biogenesis protein; fimbrial biogenesis protein 3235369 6160110 Lcho_2932 Leptothrix cholodnii SP-6 fimbrial biogenesis protein YP_001791962.1 3234095 D 395495 CDS YP_001791963.1 171059614 6160111 3235366..3236547 1 NC_010524.1 KEGG: eba:ebA5107 hypothetical protein; hypothetical protein 3236547 6160111 Lcho_2933 Leptothrix cholodnii SP-6 hypothetical protein YP_001791963.1 3235366 D 395495 CDS YP_001791964.1 171059615 6160112 3236621..3237871 1 NC_010524.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: mpt:Mpe_A2945 bifunctional protein diaminohydroxyphosphoribosylaminopyrimidine deaminase, 5-amino-6-(5-phosphoribosylamino)uracil reductase; riboflavin biosynthesis protein RibD 3237871 6160112 Lcho_2934 Leptothrix cholodnii SP-6 riboflavin biosynthesis protein RibD YP_001791964.1 3236621 D 395495 CDS YP_001791965.1 171059616 6160113 3237919..3239010 1 NC_010524.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: mpt:Mpe_A2947 putative riboflavin biosynthesis bifunctional protein; 3,4-dihydroxy-2-butanone 4-phosphate synthase 3239010 6160113 Lcho_2935 Leptothrix cholodnii SP-6 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001791965.1 3237919 D 395495 CDS YP_001791966.1 171059617 6160114 3239067..3239531 1 NC_010524.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 3239531 ribH 6160114 ribH Leptothrix cholodnii SP-6 6,7-dimethyl-8-ribityllumazine synthase YP_001791966.1 3239067 D 395495 CDS YP_001791967.1 171059618 6160115 3239528..3240043 1 NC_010524.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: mpt:Mpe_A2949 putative N utilization substance B (transcriptional antiterminator)(l factor) transcription regulator protein; NusB antitermination factor 3240043 6160115 Lcho_2937 Leptothrix cholodnii SP-6 NusB antitermination factor YP_001791967.1 3239528 D 395495 CDS YP_001791968.1 171059619 6159731 3240146..3241336 1 NC_010524.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aminotransferase class I and II; KEGG: mpt:Mpe_A2950 aminotransferase; aminotransferase 3241336 6159731 Lcho_2938 Leptothrix cholodnii SP-6 aminotransferase YP_001791968.1 3240146 D 395495 CDS YP_001791969.1 171059620 6159732 3241333..3242670 1 NC_010524.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mpt:Mpe_A2951 serine/threonine protein kinase-like protein; serine/threonine protein kinase 3242670 6159732 Lcho_2939 Leptothrix cholodnii SP-6 serine/threonine protein kinase YP_001791969.1 3241333 D 395495 CDS YP_001791970.1 171059621 6159733 3242690..3243127 1 NC_010524.1 TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: mpt:Mpe_A2953 putative thioesterase protein; tol-pal system-associated acyl-CoA thioesterase 3243127 6159733 Lcho_2940 Leptothrix cholodnii SP-6 tol-pal system-associated acyl-CoA thioesterase YP_001791970.1 3242690 D 395495 CDS YP_001791971.1 171059622 6159734 3243124..3243834 1 NC_010524.1 TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: mpt:Mpe_A2954 transmembrane protein/biopolymer transport; protein TolQ 3243834 6159734 Lcho_2941 Leptothrix cholodnii SP-6 protein TolQ YP_001791971.1 3243124 D 395495 CDS YP_001791972.1 171059623 6159735 3243848..3244318 1 NC_010524.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mpt:Mpe_A2955 putative TolR-like translocation protein; biopolymer transport protein ExbD/TolR 3244318 6159735 Lcho_2942 Leptothrix cholodnii SP-6 biopolymer transport protein ExbD/TolR YP_001791972.1 3243848 D 395495 CDS YP_001791973.1 171059624 6159736 3244322..3245338 1 NC_010524.1 TIGRFAM: TonB family protein; protein TolA; PFAM: Tol-Pal system TolA; KEGG: ajs:Ajs_2773 TonB family protein; protein TolA 3245338 6159736 Lcho_2943 Leptothrix cholodnii SP-6 protein TolA YP_001791973.1 3244322 D 395495 CDS YP_001791974.1 171059625 6159737 3245412..3246812 1 NC_010524.1 KEGG: mpt:Mpe_A2511 conserved hypothetical HD-GYP hydrolase domain containing protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 3246812 6159737 Lcho_2944 Leptothrix cholodnii SP-6 metal dependent phosphohydrolase YP_001791974.1 3245412 D 395495 CDS YP_001791975.1 171059626 6159711 3246824..3249370 1 NC_010524.1 KEGG: mpt:Mpe_A2510 signal transduction protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3249370 6159711 Lcho_2945 Leptothrix cholodnii SP-6 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001791975.1 3246824 D 395495 CDS YP_001791976.1 171059627 6159712 3249435..3249737 1 NC_010524.1 KEGG: xcb:XC_2829 hypothetical protein; hypothetical protein 3249737 6159712 Lcho_2946 Leptothrix cholodnii SP-6 hypothetical protein YP_001791976.1 3249435 D 395495 CDS YP_001791977.1 171059628 6159713 complement(3249754..3250878) 1 NC_010524.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: mex:Mext_4798 2-alkenal reductase; 2-alkenal reductase 3250878 6159713 Lcho_2947 Leptothrix cholodnii SP-6 2-alkenal reductase YP_001791977.1 3249754 R 395495 CDS YP_001791978.1 171059629 6159714 3251005..3251121 1 NC_010524.1 hypothetical protein 3251121 6159714 Lcho_2948 Leptothrix cholodnii SP-6 hypothetical protein YP_001791978.1 3251005 D 395495 CDS YP_001791979.1 171059630 6159715 3251121..3252008 1 NC_010524.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: reh:H16_A3687 putative chloramphenicol sensitive permease; transporter DMT superfamily protein 3252008 6159715 Lcho_2949 Leptothrix cholodnii SP-6 transporter DMT superfamily protein YP_001791979.1 3251121 D 395495 CDS YP_001791980.1 171059631 6159716 3252040..3253377 1 NC_010524.1 KEGG: mpt:Mpe_A2215 hypothetical protein; hypothetical protein 3253377 6159716 Lcho_2950 Leptothrix cholodnii SP-6 hypothetical protein YP_001791980.1 3252040 D 395495 CDS YP_001791981.1 171059632 6159717 complement(3253395..3253805) 1 NC_010524.1 PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; KEGG: cch:Cag_1325 nucleic acid-binding protein,contains PIN domain; PilT domain-containing protein 3253805 6159717 Lcho_2951 Leptothrix cholodnii SP-6 PilT domain-containing protein YP_001791981.1 3253395 R 395495 CDS YP_001791982.1 171059633 6160391 complement(3253819..3254052) 1 NC_010524.1 KEGG: eba:ebD16 hypothetical protein; hypothetical protein 3254052 6160391 Lcho_2952 Leptothrix cholodnii SP-6 hypothetical protein YP_001791982.1 3253819 R 395495 CDS YP_001791983.1 171059634 6160393 complement(3254528..3255202) 1 NC_010524.1 KEGG: bfs:BF1531 hypothetical protein; hypothetical protein 3255202 6160393 Lcho_2954 Leptothrix cholodnii SP-6 hypothetical protein YP_001791983.1 3254528 R 395495 CDS YP_001791984.1 171059635 6160394 complement(3255202..3256251) 1 NC_010524.1 PFAM: protein of unknown function DUF262; KEGG: bfs:BF1532 hypothetical protein; hypothetical protein 3256251 6160394 Lcho_2955 Leptothrix cholodnii SP-6 hypothetical protein YP_001791984.1 3255202 R 395495 CDS YP_001791985.1 171059636 6160395 complement(3256555..3257034) 1 NC_010524.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bpt:Bpet0843 hypothetical protein; 3-demethylubiquinone-9 3-methyltransferase 3257034 6160395 Lcho_2956 Leptothrix cholodnii SP-6 3-demethylubiquinone-9 3-methyltransferase YP_001791985.1 3256555 R 395495 CDS YP_001791986.1 171059637 6160396 3257259..3257849 1 NC_010524.1 PFAM: CBS domain containing protein; KEGG: tbd:Tbd_0664 hypothetical protein; hypothetical protein 3257849 6160396 Lcho_2957 Leptothrix cholodnii SP-6 hypothetical protein YP_001791986.1 3257259 D 395495 CDS YP_001791987.1 171059638 6160397 3257925..3258560 1 NC_010524.1 PFAM: Glutathione S-transferase domain; KEGG: azo:azo2267 putative glutathione transferase; glutathione S-transferase domain-containing protein 3258560 6160397 Lcho_2958 Leptothrix cholodnii SP-6 glutathione S-transferase domain-containing protein YP_001791987.1 3257925 D 395495 CDS YP_001791988.1 171059639 6160398 3258702..3260579 1 NC_010524.1 PFAM: NERD domain protein; KEGG: rso:RS02993 hypothetical protein; NERD domain-containing protein 3260579 6160398 Lcho_2959 Leptothrix cholodnii SP-6 NERD domain-containing protein YP_001791988.1 3258702 D 395495 CDS YP_001791989.1 171059640 6160400 complement(3262158..3263213) 1 NC_010524.1 PFAM: DNA/RNA non-specific endonuclease; KEGG: xcv:XCV3882 putative endonuclease precursor; DNA/RNA non-specific endonuclease 3263213 6160400 Lcho_2962 Leptothrix cholodnii SP-6 DNA/RNA non-specific endonuclease YP_001791989.1 3262158 R 395495 CDS YP_001791990.1 171059641 6160401 complement(3263344..3263592) 1 NC_010524.1 TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB; KEGG: eba:ebD102 hypothetical protein; addiction module antitoxin 3263592 6160401 Lcho_2963 Leptothrix cholodnii SP-6 addiction module antitoxin YP_001791990.1 3263344 R 395495 CDS YP_001791991.1 171059642 6160402 complement(3263604..3263846) 1 NC_010524.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: eba:ebD103 putative antitoxin of toxin-antitoxin stability system; prevent-host-death family protein 3263846 6160402 Lcho_2964 Leptothrix cholodnii SP-6 prevent-host-death family protein YP_001791991.1 3263604 R 395495 CDS YP_001791992.1 171059643 6160403 3263989..3265809 1 NC_010524.1 PFAM: creatinase; peptidase M24; KEGG: mpt:Mpe_A2217 putative peptidase, M24 family protein; peptidase M24 3265809 6160403 Lcho_2965 Leptothrix cholodnii SP-6 peptidase M24 YP_001791992.1 3263989 D 395495 CDS YP_001791993.1 171059644 6160404 complement(3265806..3267596) 1 NC_010524.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: tbd:Tbd_0660 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3267596 6160404 Lcho_2966 Leptothrix cholodnii SP-6 methyl-accepting chemotaxis sensory transducer YP_001791993.1 3265806 R 395495 CDS YP_001791994.1 171059645 6160448 complement(3267977..3270835) 1 NC_010524.1 KEGG: mpt:Mpe_A2083 hypothetical protein; hypothetical protein 3270835 6160448 Lcho_2967 Leptothrix cholodnii SP-6 hypothetical protein YP_001791994.1 3267977 R 395495 CDS YP_001791995.1 171059646 6160449 complement(3270868..3272601) 1 NC_010524.1 KEGG: mpt:Mpe_A2113 NAD(+) synthase (glutamine-hydrolyzing); TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD synthase; NAD+ synthetase 3272601 6160449 Lcho_2968 Leptothrix cholodnii SP-6 NAD+ synthetase YP_001791995.1 3270868 R 395495 CDS YP_001791996.1 171059647 6160450 3272807..3273952 1 NC_010524.1 PFAM: protein of unknown function DUF482; KEGG: mpt:Mpe_A2114 hypothetical protein; hypothetical protein 3273952 6160450 Lcho_2969 Leptothrix cholodnii SP-6 hypothetical protein YP_001791996.1 3272807 D 395495 CDS YP_001791997.1 171059648 6160451 3274188..3274637 1 NC_010524.1 KEGG: dac:Daci_0558 hypothetical protein; hypothetical protein 3274637 6160451 Lcho_2970 Leptothrix cholodnii SP-6 hypothetical protein YP_001791997.1 3274188 D 395495 CDS YP_001791998.1 171059649 6160452 complement(3274646..3276439) 1 NC_010524.1 PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: ppf:Pput_3498 ABC transporter domain protein; ABC transporter 3276439 6160452 Lcho_2971 Leptothrix cholodnii SP-6 ABC transporter YP_001791998.1 3274646 R 395495 CDS YP_001791999.1 171059650 6160453 complement(3276558..3277097) 1 NC_010524.1 PFAM: Inorganic pyrophosphatase; KEGG: mpt:Mpe_A2120 inorganic diphosphatase; inorganic diphosphatase 3277097 6160453 Lcho_2972 Leptothrix cholodnii SP-6 inorganic diphosphatase YP_001791999.1 3276558 R 395495 CDS YP_001792000.1 171059651 6160454 3277387..3279525 1 NC_010524.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 3279525 hppA 6160454 hppA Leptothrix cholodnii SP-6 membrane-bound proton-translocating pyrophosphatase YP_001792000.1 3277387 D 395495 CDS YP_001792001.1 171059652 6160599 3279829..3281070 1 NC_010524.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: aav:Aave_2488 polyhydroxyalkanoate depolymerase, intracellular; polyhydroxyalkanoate depolymerase 3281070 6160599 Lcho_2974 Leptothrix cholodnii SP-6 polyhydroxyalkanoate depolymerase YP_001792001.1 3279829 D 395495 CDS YP_001792002.1 171059653 6160600 3281143..3281817 1 NC_010524.1 TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: mpt:Mpe_A2296 putative electron transport-related protein; RnfABCDGE type electron transport complex subunit B 3281817 6160600 Lcho_2975 Leptothrix cholodnii SP-6 RnfABCDGE type electron transport complex subunit B YP_001792002.1 3281143 D 395495 CDS YP_001792003.1 171059654 6160601 complement(3281841..3282752) 1 NC_010524.1 KEGG: pol:Bpro_1716 hypothetical protein; hypothetical protein 3282752 6160601 Lcho_2976 Leptothrix cholodnii SP-6 hypothetical protein YP_001792003.1 3281841 R 395495 CDS YP_001792004.1 171059655 6160603 3283123..3284412 1 NC_010524.1 PFAM: integrase family protein; KEGG: bam:Bamb_0912 phage integrase family protein; integrase family protein 3284412 6160603 Lcho_2977 Leptothrix cholodnii SP-6 integrase family protein YP_001792004.1 3283123 D 395495 CDS YP_001792005.1 171059656 6160604 3284912..3285184 1 NC_010524.1 PFAM: Prophage CP4-57 regulatory; phage transcriptional regulator AlpA 3285184 6160604 Lcho_2978 Leptothrix cholodnii SP-6 phage transcriptional regulator AlpA YP_001792005.1 3284912 D 395495 CDS YP_001792006.1 171059657 6161438 3285184..3285459 1 NC_010524.1 hypothetical protein 3285459 6161438 Lcho_2979 Leptothrix cholodnii SP-6 hypothetical protein YP_001792006.1 3285184 D 395495 CDS YP_001792007.1 171059658 6161439 3285680..3285898 1 NC_010524.1 hypothetical protein 3285898 6161439 Lcho_2980 Leptothrix cholodnii SP-6 hypothetical protein YP_001792007.1 3285680 D 395495 CDS YP_001792008.1 171059659 6161440 3285891..3286097 1 NC_010524.1 hypothetical protein 3286097 6161440 Lcho_2981 Leptothrix cholodnii SP-6 hypothetical protein YP_001792008.1 3285891 D 395495 CDS YP_001792009.1 171059660 6161441 3286099..3286626 1 NC_010524.1 hypothetical protein 3286626 6161441 Lcho_2982 Leptothrix cholodnii SP-6 hypothetical protein YP_001792009.1 3286099 D 395495 CDS YP_001792010.1 171059661 6161442 3286623..3287438 1 NC_010524.1 KEGG: pna:Pnap_0964 hypothetical protein; hypothetical protein 3287438 6161442 Lcho_2983 Leptothrix cholodnii SP-6 hypothetical protein YP_001792010.1 3286623 D 395495 CDS YP_001792011.1 171059662 6161443 3287435..3289063 1 NC_010524.1 KEGG: pna:Pnap_0963 hypothetical protein; hypothetical protein 3289063 6161443 Lcho_2984 Leptothrix cholodnii SP-6 hypothetical protein YP_001792011.1 3287435 D 395495 CDS YP_001792012.1 171059663 6161444 3289408..3289941 1 NC_010524.1 KEGG: dac:Daci_4688 hypothetical protein; hypothetical protein 3289941 6161444 Lcho_2985 Leptothrix cholodnii SP-6 hypothetical protein YP_001792012.1 3289408 D 395495 CDS YP_001792013.1 171059664 6162640 3289916..3290386 1 NC_010524.1 hypothetical protein 3290386 6162640 Lcho_2986 Leptothrix cholodnii SP-6 hypothetical protein YP_001792013.1 3289916 D 395495 CDS YP_001792014.1 171059665 6162641 3290419..3290697 1 NC_010524.1 hypothetical protein 3290697 6162641 Lcho_2987 Leptothrix cholodnii SP-6 hypothetical protein YP_001792014.1 3290419 D 395495 CDS YP_001792015.1 171059666 6162642 3290684..3292486 1 NC_010524.1 PFAM: peptidase U35 phage prohead HK97; KEGG: rsq:Rsph17025_2821 peptidase U35, phage prohead HK97; peptidase U35 phage prohead HK97 3292486 6162642 Lcho_2988 Leptothrix cholodnii SP-6 peptidase U35 phage prohead HK97 YP_001792015.1 3290684 D 395495 CDS YP_001792016.1 171059667 6162643 3292686..3293096 1 NC_010524.1 hypothetical protein 3293096 6162643 Lcho_2989 Leptothrix cholodnii SP-6 hypothetical protein YP_001792016.1 3292686 D 395495 CDS YP_001792017.1 171059668 6162644 complement(3293345..3293818) 1 NC_010524.1 KEGG: rfr:Rfer_0046 cytochrome c family protein, putative; cytochrome c family protein 3293818 6162644 Lcho_2990 Leptothrix cholodnii SP-6 cytochrome c family protein YP_001792017.1 3293345 R 395495 CDS YP_001792018.1 171059669 6162645 3293978..3295684 1 NC_010524.1 KEGG: bba:Bd3194 hypothetical protein; hypothetical protein 3295684 6162645 Lcho_2991 Leptothrix cholodnii SP-6 hypothetical protein YP_001792018.1 3293978 D 395495 CDS YP_001792019.1 171059670 6162646 complement(3295737..3296816) 1 NC_010524.1 KEGG: ajs:Ajs_2860 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 3296816 6162646 Lcho_2992 Leptothrix cholodnii SP-6 tartrate dehydrogenase YP_001792019.1 3295737 R 395495 CDS YP_001792020.1 171059671 6163840 complement(3296856..3298493) 1 NC_010524.1 PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: mpt:Mpe_A2516 vinylacetyl-CoA delta-isomerase; vinylacetyl-CoA Delta-isomerase 3298493 6163840 Lcho_2993 Leptothrix cholodnii SP-6 vinylacetyl-CoA Delta-isomerase YP_001792020.1 3296856 R 395495 CDS YP_001792021.1 171059672 6163841 3298644..3299189 1 NC_010524.1 PFAM: isochorismatase hydrolase; KEGG: mpt:Mpe_A2514 hypothetical protein; isochorismatase hydrolase 3299189 6163841 Lcho_2994 Leptothrix cholodnii SP-6 isochorismatase hydrolase YP_001792021.1 3298644 D 395495 CDS YP_001792022.1 171059673 6163842 complement(3299215..3300063) 1 NC_010524.1 PFAM: protein of unknown function RIO1; KEGG: mpt:Mpe_A1034 RIO-type serine/threonine protein kinase; hypothetical protein 3300063 6163842 Lcho_2995 Leptothrix cholodnii SP-6 hypothetical protein YP_001792022.1 3299215 R 395495 CDS YP_001792023.1 171059674 6163843 complement(3300066..3302339) 1 NC_010524.1 PFAM: helicase domain protein; SMART: DEAD-like helicases; KEGG: gox:GOX1762 putative RNA helicase; helicase domain-containing protein 3302339 6163843 Lcho_2996 Leptothrix cholodnii SP-6 helicase domain-containing protein YP_001792023.1 3300066 R 395495 CDS YP_001792024.1 171059675 6163844 3302398..3303831 1 NC_010524.1 PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bxe:Bxe_A4436 ATP-dependent RNA helicase DbpA; DEAD/DEAH box helicase 3303831 6163844 Lcho_2997 Leptothrix cholodnii SP-6 DEAD/DEAH box helicase YP_001792024.1 3302398 D 395495 CDS YP_001792025.1 171059676 6163845 3304005..3306266 1 NC_010524.1 KEGG: xac:XAC2202 hemolysin secretion protein B; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; type I secretion system ATPase 3306266 6163845 Lcho_2998 Leptothrix cholodnii SP-6 type I secretion system ATPase YP_001792025.1 3304005 D 395495 CDS YP_001792026.1 171059677 6163913 3307049..3307522 1 NC_010524.1 KEGG: aav:Aave_4358 transposition helper protein; transposition helper protein 3307522 6163913 Lcho_3000 Leptothrix cholodnii SP-6 transposition helper protein YP_001792026.1 3307049 D 395495 CDS YP_001792027.1 171059678 6163914 3307519..3308607 1 NC_010524.1 PFAM: Integrase catalytic region; KEGG: bpt:Bpet3733 putative transposase; integrase catalytic subunit 3308607 6163914 Lcho_3001 Leptothrix cholodnii SP-6 integrase catalytic subunit YP_001792027.1 3307519 D 395495 CDS YP_001792028.1 171059679 6163915 3309463..3310350 1 NC_010524.1 hypothetical protein 3310350 6163915 Lcho_3002 Leptothrix cholodnii SP-6 hypothetical protein YP_001792028.1 3309463 D 395495 CDS YP_001792029.1 171059680 6163917 complement(3314124..3315104) 1 NC_010524.1 PFAM: Integrase catalytic region; KEGG: bxe:Bxe_B0052 putative transposase; integrase catalytic subunit 3315104 6163917 Lcho_3004 Leptothrix cholodnii SP-6 integrase catalytic subunit YP_001792029.1 3314124 R 395495 CDS YP_001792030.1 171059681 6163918 3317961..3318941 1 NC_010524.1 PFAM: Integrase catalytic region; KEGG: bxe:Bxe_B0052 putative transposase; integrase catalytic subunit 3318941 6163918 Lcho_3005 Leptothrix cholodnii SP-6 integrase catalytic subunit YP_001792030.1 3317961 D 395495 CDS YP_001792031.1 171059682 6163919 complement(3321035..3322459) 1 NC_010524.1 PFAM: FAD linked oxidase domain protein; KEGG: rso:RSc1556 probable oxidoreductase protein; FAD linked oxidase domain-containing protein 3322459 6163919 Lcho_3006 Leptothrix cholodnii SP-6 FAD linked oxidase domain-containing protein YP_001792031.1 3321035 R 395495 CDS YP_001792032.1 171059683 6160850 complement(3322464..3323525) 1 NC_010524.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: mpt:Mpe_A3247 conserved hypothetical dioxygenase; 2-nitropropane dioxygenase 3323525 6160850 Lcho_3007 Leptothrix cholodnii SP-6 2-nitropropane dioxygenase YP_001792032.1 3322464 R 395495 CDS YP_001792033.1 171059684 6160851 3323694..3324119 1 NC_010524.1 PFAM: Domain of unknown function DUF1924; KEGG: pna:Pnap_1532 mono-heme class I cytochrome c; hypothetical protein 3324119 6160851 Lcho_3008 Leptothrix cholodnii SP-6 hypothetical protein YP_001792033.1 3323694 D 395495 CDS YP_001792034.1 171059685 6160852 3324116..3324637 1 NC_010524.1 KEGG: pna:Pnap_1533 diheme cytochrome c; hypothetical protein 3324637 6160852 Lcho_3009 Leptothrix cholodnii SP-6 hypothetical protein YP_001792034.1 3324116 D 395495 CDS YP_001792035.1 171059686 6160853 3324634..3325344 1 NC_010524.1 PFAM: cytochrome B561; KEGG: bvi:Bcep1808_6299 cytochrome b561; cytochrome B561 3325344 6160853 Lcho_3010 Leptothrix cholodnii SP-6 cytochrome B561 YP_001792035.1 3324634 D 395495 CDS YP_001792036.1 171059687 6160854 3325356..3326021 1 NC_010524.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rfr:Rfer_0503 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3326021 6160854 Lcho_3011 Leptothrix cholodnii SP-6 two component transcriptional regulator YP_001792036.1 3325356 D 395495 CDS YP_001792037.1 171059688 6160855 3326021..3327448 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rfr:Rfer_0504 periplasmic sensor signal transduction histidine kinase; histidine kinase 3327448 6160855 Lcho_3012 Leptothrix cholodnii SP-6 histidine kinase YP_001792037.1 3326021 D 395495 CDS YP_001792038.1 171059689 6160856 3327570..3329243 1 NC_010524.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: rpa:RPA0955 putative 5'-nucleotidase family protein; 5'-nucleotidase domain-containing protein 3329243 6160856 Lcho_3013 Leptothrix cholodnii SP-6 5'-nucleotidase domain-containing protein YP_001792038.1 3327570 D 395495 CDS YP_001792039.1 171059690 6161080 3329323..3330405 1 NC_010524.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 3330405 6161080 Lcho_3014 Leptothrix cholodnii SP-6 phosphoserine aminotransferase YP_001792039.1 3329323 D 395495 CDS YP_001792040.1 171059691 6161081 3330398..3331606 1 NC_010524.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: tbd:Tbd_0950 D-isomer specific 2-hydroxyacid dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 3331606 6161081 Lcho_3015 Leptothrix cholodnii SP-6 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_001792040.1 3330398 D 395495 CDS YP_001792041.1 171059692 6161082 3331659..3332714 1 NC_010524.1 KEGG: mgm:Mmc1_2535 ABC-type nitrate/sulfonate/bicarbonate transport system protein; ABC-type nitrate/sulfonate/bicarbonate transport system protein 3332714 6161082 Lcho_3016 Leptothrix cholodnii SP-6 ABC-type nitrate/sulfonate/bicarbonate transport system protein YP_001792041.1 3331659 D 395495 CDS YP_001792042.1 171059693 6161083 3332711..3334462 1 NC_010524.1 KEGG: rfr:Rfer_3932 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; putative PAS/PAC sensor protein 3334462 6161083 Lcho_3017 Leptothrix cholodnii SP-6 putative PAS/PAC sensor protein YP_001792042.1 3332711 D 395495 CDS YP_001792043.1 171059694 6161084 3334468..3337911 1 NC_010524.1 KEGG: aav:Aave_0649 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3337911 6161084 Lcho_3018 Leptothrix cholodnii SP-6 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001792043.1 3334468 D 395495 CDS YP_001792044.1 171059695 6161085 3338092..3339129 1 NC_010524.1 KEGG: aha:AHA_2711 hypothetical protein; hypothetical protein 3339129 6161085 Lcho_3019 Leptothrix cholodnii SP-6 hypothetical protein YP_001792044.1 3338092 D 395495 CDS YP_001792045.1 171059696 6161086 complement(3339160..3339879) 1 NC_010524.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mpt:Mpe_A0770 transcriptional regulator, GntR family; GntR family transcriptional regulator 3339879 6161086 Lcho_3020 Leptothrix cholodnii SP-6 GntR family transcriptional regulator YP_001792045.1 3339160 R 395495 CDS YP_001792046.1 171059697 6160843 complement(3339890..3340588) 1 NC_010524.1 PFAM: isochorismatase hydrolase; KEGG: scl:sce4416 putative isochorismatase; isochorismatase hydrolase 3340588 6160843 Lcho_3021 Leptothrix cholodnii SP-6 isochorismatase hydrolase YP_001792046.1 3339890 R 395495 CDS YP_001792047.1 171059698 6160844 complement(3340585..3342264) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1372 ABC transporter, duplicated ATPase subunits; ABC transporter-like protein 3342264 6160844 Lcho_3022 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792047.1 3340585 R 395495 CDS YP_001792048.1 171059699 6160845 complement(3342377..3343078) 1 NC_010524.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_1705 isochorismatase hydrolase; isochorismatase hydrolase 3343078 6160845 Lcho_3023 Leptothrix cholodnii SP-6 isochorismatase hydrolase YP_001792048.1 3342377 R 395495 CDS YP_001792049.1 171059700 6160846 complement(3343092..3344015) 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: mlo:mlr7063 sugar ABC transporter, permease protein; inner-membrane translocator 3344015 6160846 Lcho_3024 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001792049.1 3343092 R 395495 CDS YP_001792050.1 171059701 6160847 complement(3344019..3345131) 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: mpt:Mpe_A0768 ABC transporter permease protein; inner-membrane translocator 3345131 6160847 Lcho_3025 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001792050.1 3344019 R 395495 CDS YP_001792051.1 171059702 6160848 complement(3345147..3346292) 1 NC_010524.1 PFAM: basic membrane lipoprotein; KEGG: mpt:Mpe_A0769 bmp family protein; basic membrane lipoprotein 3346292 6160848 Lcho_3026 Leptothrix cholodnii SP-6 basic membrane lipoprotein YP_001792051.1 3345147 R 395495 CDS YP_001792052.1 171059703 6160849 complement(3346343..3346759) 1 NC_010524.1 KEGG: mpt:Mpe_A0771 hypothetical protein; hypothetical protein 3346759 6160849 Lcho_3027 Leptothrix cholodnii SP-6 hypothetical protein YP_001792052.1 3346343 R 395495 CDS YP_001792053.1 171059704 6162465 complement(3346780..3348183) 1 NC_010524.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 3348183 6162465 Lcho_3028 Leptothrix cholodnii SP-6 amidase YP_001792053.1 3346780 R 395495 CDS YP_001792054.1 171059705 6162466 complement(3348180..3348377) 1 NC_010524.1 hypothetical protein 3348377 6162466 Lcho_3029 Leptothrix cholodnii SP-6 hypothetical protein YP_001792054.1 3348180 R 395495 CDS YP_001792055.1 171059706 6162467 complement(3348374..3348583) 1 NC_010524.1 hypothetical protein 3348583 6162467 Lcho_3030 Leptothrix cholodnii SP-6 hypothetical protein YP_001792055.1 3348374 R 395495 CDS YP_001792056.1 171059707 6162468 complement(3348587..3350452) 1 NC_010524.1 TIGRFAM: allophanate hydrolase; PFAM: Amidase; KEGG: mpt:Mpe_A0773 UreA amidolyase; allophanate hydrolase 3350452 6162468 Lcho_3031 Leptothrix cholodnii SP-6 allophanate hydrolase YP_001792056.1 3348587 R 395495 CDS YP_001792057.1 171059708 6162469 3350774..3351856 1 NC_010524.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: noc:Noc_1881 helix-turn-helix, fis-type; putative sigma-54 specific transcriptional regulator 3351856 6162469 Lcho_3032 Leptothrix cholodnii SP-6 putative sigma-54 specific transcriptional regulator YP_001792057.1 3350774 D 395495 CDS YP_001792058.1 171059709 6162470 3352076..3352291 1 NC_010524.1 KEGG: hch:HCH_04226 hypothetical protein; hypothetical protein 3352291 6162470 Lcho_3033 Leptothrix cholodnii SP-6 hypothetical protein YP_001792058.1 3352076 D 395495 CDS YP_001792059.1 171059710 6162471 3352339..3352938 1 NC_010524.1 KEGG: mxa:MXAN_4492 hypothetical protein; hypothetical protein 3352938 6162471 Lcho_3034 Leptothrix cholodnii SP-6 hypothetical protein YP_001792059.1 3352339 D 395495 CDS YP_001792060.1 171059711 6162107 3352935..3353744 1 NC_010524.1 KEGG: mxa:MXAN_4493 hypothetical protein; hypothetical protein 3353744 6162107 Lcho_3035 Leptothrix cholodnii SP-6 hypothetical protein YP_001792060.1 3352935 D 395495 CDS YP_001792061.1 171059712 6162108 3353799..3355589 1 NC_010524.1 PFAM: tail sheath protein; KEGG: mxa:MXAN_4494 putative phage tail sheath protein; tail sheath protein 3355589 6162108 Lcho_3036 Leptothrix cholodnii SP-6 tail sheath protein YP_001792061.1 3353799 D 395495 CDS YP_001792062.1 171059713 6162109 3355617..3356060 1 NC_010524.1 TIGRFAM: conserved hypothetical phage tail protein; PFAM: conserved hypothetical protein; KEGG: mxa:MXAN_4495 hypothetical protein; phage tail protein 3356060 6162109 Lcho_3037 Leptothrix cholodnii SP-6 phage tail protein YP_001792062.1 3355617 D 395495 CDS YP_001792063.1 171059714 6162110 3356080..3357684 1 NC_010524.1 KEGG: mxa:MXAN_4496 hypothetical protein; hypothetical protein 3357684 6162110 Lcho_3038 Leptothrix cholodnii SP-6 hypothetical protein YP_001792063.1 3356080 D 395495 CDS YP_001792064.1 171059715 6162111 3357681..3358163 1 NC_010524.1 TIGRFAM: conserved hypothetical phage tail protein; PFAM: conserved hypothetical protein; KEGG: mxa:MXAN_4497 hypothetical protein; phage tail protein 3358163 6162111 Lcho_3039 Leptothrix cholodnii SP-6 phage tail protein YP_001792064.1 3357681 D 395495 CDS YP_001792065.1 171059716 6162112 3358165..3359139 1 NC_010524.1 KEGG: mxa:MXAN_4498 hypothetical protein; hypothetical protein 3359139 6162112 Lcho_3040 Leptothrix cholodnii SP-6 hypothetical protein YP_001792065.1 3358165 D 395495 CDS YP_001792066.1 171059717 6162113 3359226..3359399 1 NC_010524.1 hypothetical protein 3359399 6162113 Lcho_3041 Leptothrix cholodnii SP-6 hypothetical protein YP_001792066.1 3359226 D 395495 CDS YP_001792067.1 171059718 6161569 3359423..3360508 1 NC_010524.1 KEGG: mxa:MXAN_4500 hypothetical protein; hypothetical protein 3360508 6161569 Lcho_3042 Leptothrix cholodnii SP-6 hypothetical protein YP_001792067.1 3359423 D 395495 CDS YP_001792068.1 171059719 6161570 3360526..3361215 1 NC_010524.1 PFAM: Rhs element Vgr protein; KEGG: eli:ELI_09320 hypothetical protein; Rhs element Vgr protein 3361215 6161570 Lcho_3043 Leptothrix cholodnii SP-6 Rhs element Vgr protein YP_001792068.1 3360526 D 395495 CDS YP_001792069.1 171059720 6161571 3361205..3362872 1 NC_010524.1 KEGG: mxa:MXAN_4502 hypothetical protein; hypothetical protein 3362872 6161571 Lcho_3044 Leptothrix cholodnii SP-6 hypothetical protein YP_001792069.1 3361205 D 395495 CDS YP_001792070.1 171059721 6161572 3362869..3363261 1 NC_010524.1 PFAM: GPW/gp25 family protein; KEGG: mxa:MXAN_4503 baseplate assembly protein W; GPW/gp25 family protein 3363261 6161572 Lcho_3045 Leptothrix cholodnii SP-6 GPW/gp25 family protein YP_001792070.1 3362869 D 395495 CDS YP_001792071.1 171059722 6161573 3363265..3365547 1 NC_010524.1 KEGG: mxa:MXAN_4504 hypothetical protein; hypothetical protein 3365547 6161573 Lcho_3046 Leptothrix cholodnii SP-6 hypothetical protein YP_001792071.1 3363265 D 395495 CDS YP_001792072.1 171059723 6161574 3365547..3368396 1 NC_010524.1 TIGRFAM: phage tail protein; KEGG: mxa:MXAN_4505 putative phage tail protein; phage tail protein 3368396 6161574 Lcho_3047 Leptothrix cholodnii SP-6 phage tail protein YP_001792072.1 3365547 D 395495 CDS YP_001792073.1 171059724 6161575 3368412..3368726 1 NC_010524.1 hypothetical protein 3368726 6161575 Lcho_3048 Leptothrix cholodnii SP-6 hypothetical protein YP_001792073.1 3368412 D 395495 CDS YP_001792074.1 171059725 6163666 3368737..3369090 1 NC_010524.1 KEGG: aga:AgaP_27410 ENSANGP00000031521; hypothetical protein 3369090 6163666 Lcho_3049 Leptothrix cholodnii SP-6 hypothetical protein YP_001792074.1 3368737 D 395495 CDS YP_001792075.1 171059726 6163667 3369087..3370016 1 NC_010524.1 KEGG: mxa:MXAN_4506 hypothetical protein; hypothetical protein 3370016 6163667 Lcho_3050 Leptothrix cholodnii SP-6 hypothetical protein YP_001792075.1 3369087 D 395495 CDS YP_001792076.1 171059727 6163668 3370039..3371973 1 NC_010524.1 KEGG: mxa:MXAN_4507 hypothetical protein; hypothetical protein 3371973 6163668 Lcho_3051 Leptothrix cholodnii SP-6 hypothetical protein YP_001792076.1 3370039 D 395495 CDS YP_001792077.1 171059728 6163669 3372032..3377014 1 NC_010524.1 KEGG: mxa:MXAN_4508 hypothetical protein; hypothetical protein 3377014 6163669 Lcho_3052 Leptothrix cholodnii SP-6 hypothetical protein YP_001792077.1 3372032 D 395495 CDS YP_001792078.1 171059729 6163670 3377018..3378640 1 NC_010524.1 KEGG: mxa:MXAN_4509 hypothetical protein; hypothetical protein 3378640 6163670 Lcho_3053 Leptothrix cholodnii SP-6 hypothetical protein YP_001792078.1 3377018 D 395495 CDS YP_001792079.1 171059730 6163671 3378637..3380814 1 NC_010524.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: mxa:MXAN_4510 ATPase, AAA family; ATPase central domain-containing protein 3380814 6163671 Lcho_3054 Leptothrix cholodnii SP-6 ATPase central domain-containing protein YP_001792079.1 3378637 D 395495 CDS YP_001792080.1 171059731 6163672 3380811..3382415 1 NC_010524.1 PFAM: OmpA/MotB domain protein; KEGG: dsh:Dshi_2548 hypothetical protein; OmpA/MotB domain-containing protein 3382415 6163672 Lcho_3055 Leptothrix cholodnii SP-6 OmpA/MotB domain-containing protein YP_001792080.1 3380811 D 395495 CDS YP_001792081.1 171059732 6163110 3382424..3382825 1 NC_010524.1 hypothetical protein 3382825 6163110 Lcho_3056 Leptothrix cholodnii SP-6 hypothetical protein YP_001792081.1 3382424 D 395495 CDS YP_001792082.1 171059733 6163111 complement(3382868..3383230) 1 NC_010524.1 KEGG: mpt:Mpe_A2139 hypothetical protein; hypothetical protein 3383230 6163111 Lcho_3057 Leptothrix cholodnii SP-6 hypothetical protein YP_001792082.1 3382868 R 395495 CDS YP_001792083.1 171059734 6163112 complement(3383327..3385315) 1 NC_010524.1 PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: mpt:Mpe_A3732 putative transmembrane protein; phospholipid/glycerol acyltransferase 3385315 6163112 Lcho_3058 Leptothrix cholodnii SP-6 phospholipid/glycerol acyltransferase YP_001792083.1 3383327 R 395495 CDS YP_001792084.1 171059735 6163113 complement(3385368..3386165) 1 NC_010524.1 KEGG: ajs:Ajs_3873 hypothetical protein; hypothetical protein 3386165 6163113 Lcho_3059 Leptothrix cholodnii SP-6 hypothetical protein YP_001792084.1 3385368 R 395495 CDS YP_001792085.1 171059736 6163114 complement(3386181..3386645) 1 NC_010524.1 KEGG: aav:Aave_4489 hypothetical protein; hypothetical protein 3386645 6163114 Lcho_3060 Leptothrix cholodnii SP-6 hypothetical protein YP_001792085.1 3386181 R 395495 CDS YP_001792086.1 171059737 6163115 complement(3386689..3387207) 1 NC_010524.1 PFAM: YiaAB two helix domain protein; KEGG: pol:Bpro_0458 hypothetical protein; YiaAB two helix domain-containing protein 3387207 6163115 Lcho_3061 Leptothrix cholodnii SP-6 YiaAB two helix domain-containing protein YP_001792086.1 3386689 R 395495 CDS YP_001792087.1 171059738 6163116 3387348..3388085 1 NC_010524.1 PFAM: helix-turn-helix domain protein; KEGG: ajs:Ajs_3879 helix-turn-helix domain protein; helix-turn-helix domain-containing protein 3388085 6163116 Lcho_3062 Leptothrix cholodnii SP-6 helix-turn-helix domain-containing protein YP_001792087.1 3387348 D 395495 CDS YP_001792088.1 171059739 6162718 complement(3388179..3390155) 1 NC_010524.1 TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: mpt:Mpe_A1385 acetyl-coenzyme A synthetase; acetate--CoA ligase 3390155 6162718 Lcho_3063 Leptothrix cholodnii SP-6 acetate--CoA ligase YP_001792088.1 3388179 R 395495 CDS YP_001792089.1 171059740 6162719 3390383..3390976 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A1384 hypothetical protein; hypothetical protein 3390976 6162719 Lcho_3064 Leptothrix cholodnii SP-6 hypothetical protein YP_001792089.1 3390383 D 395495 CDS YP_001792090.1 171059741 6162720 3391075..3392601 1 NC_010524.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: mpt:Mpe_A1382 putative fumarate hydratase; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha 3392601 6162720 Lcho_3065 Leptothrix cholodnii SP-6 tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha YP_001792090.1 3391075 D 395495 CDS YP_001792091.1 171059742 6162721 complement(3392603..3393961) 1 NC_010524.1 PFAM: MscS Mechanosensitive ion channel; KEGG: pol:Bpro_3144 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 3393961 6162721 Lcho_3066 Leptothrix cholodnii SP-6 mechanosensitive ion channel protein MscS YP_001792091.1 3392603 R 395495 CDS YP_001792092.1 171059743 6162722 3394000..3394770 1 NC_010524.1 PFAM: pseudouridine synthase; KEGG: pna:Pnap_1276 pseudouridine synthase; pseudouridine synthase 3394770 6162722 Lcho_3067 Leptothrix cholodnii SP-6 pseudouridine synthase YP_001792092.1 3394000 D 395495 CDS YP_001792093.1 171059744 6162723 complement(3394959..3395990) 1 NC_010524.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: tbd:Tbd_0099 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3395990 6162723 Lcho_3068 Leptothrix cholodnii SP-6 NAD-dependent epimerase/dehydratase YP_001792093.1 3394959 R 395495 CDS YP_001792094.1 171059745 6162724 complement(3395990..3397270) 1 NC_010524.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: dar:Daro_2440 UDP-glucose/GDP-mannose dehydrogenase:6-phosphogluconate dehydrogenase, NAD-binding; nucleotide sugar dehydrogenase 3397270 6162724 Lcho_3069 Leptothrix cholodnii SP-6 nucleotide sugar dehydrogenase YP_001792094.1 3395990 R 395495 CDS YP_001792095.1 171059746 6162633 complement(3397431..3398591) 1 NC_010524.1 KEGG: rpb:RPB_3755 hypothetical protein; cellulose biosynthesis protein CelD 3398591 6162633 Lcho_3070 Leptothrix cholodnii SP-6 cellulose biosynthesis protein CelD YP_001792095.1 3397431 R 395495 CDS YP_001792096.1 171059747 6162634 complement(3398745..3399926) 1 NC_010524.1 KEGG: acr:Acry_1801 protein involved in cellulose biosynthesis (CelD)-like protein; cellulose biosynthesis protein CelD-like protein 3399926 6162634 Lcho_3071 Leptothrix cholodnii SP-6 cellulose biosynthesis protein CelD-like protein YP_001792096.1 3398745 R 395495 CDS YP_001792097.1 171059748 6162635 complement(3400053..3401108) 1 NC_010524.1 PFAM: acyltransferase 3; KEGG: rpb:RPB_0504 acyltransferase 3; acyltransferase 3 3401108 6162635 Lcho_3072 Leptothrix cholodnii SP-6 acyltransferase 3 YP_001792097.1 3400053 R 395495 CDS YP_001792098.1 171059749 6162636 3401631..3403106 1 NC_010524.1 PFAM: polysaccharide biosynthesis protein; KEGG: ppd:Ppro_2862 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 3403106 6162636 Lcho_3073 Leptothrix cholodnii SP-6 polysaccharide biosynthesis protein YP_001792098.1 3401631 D 395495 CDS YP_001792099.1 171059750 6162637 3403152..3404117 1 NC_010524.1 PFAM: polysaccharide deacetylase; KEGG: mav:MAV_1144 polysaccharide deacetylase domain protein; polysaccharide deacetylase 3404117 6162637 Lcho_3074 Leptothrix cholodnii SP-6 polysaccharide deacetylase YP_001792099.1 3403152 D 395495 CDS YP_001792100.1 171059751 6162638 3404130..3405254 1 NC_010524.1 PFAM: glycosyl transferase family 2; KEGG: scl:sce0862 glycosyltransferase; glycosyl transferase family protein 3405254 6162638 Lcho_3075 Leptothrix cholodnii SP-6 glycosyl transferase family protein YP_001792100.1 3404130 D 395495 CDS YP_001792101.1 171059752 6162639 3405272..3406048 1 NC_010524.1 PFAM: polysaccharide deacetylase; KEGG: gme:Gmet_2023 polysaccharide deacetylase; polysaccharide deacetylase 3406048 6162639 Lcho_3076 Leptothrix cholodnii SP-6 polysaccharide deacetylase YP_001792101.1 3405272 D 395495 CDS YP_001792102.1 171059753 6160469 3406017..3407531 1 NC_010524.1 PFAM: O-antigen polymerase; KEGG: cau:Caur_3256 O-antigen polymerase; O-antigen polymerase 3407531 6160469 Lcho_3077 Leptothrix cholodnii SP-6 O-antigen polymerase YP_001792102.1 3406017 D 395495 CDS YP_001792103.1 171059754 6160470 3407558..3409060 1 NC_010524.1 PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_3580 O-antigen polymerase; O-antigen polymerase 3409060 6160470 Lcho_3078 Leptothrix cholodnii SP-6 O-antigen polymerase YP_001792103.1 3407558 D 395495 CDS YP_001792104.1 171059755 6160471 complement(3409045..3410055) 1 NC_010524.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: eba:ebA1639 predicted nucleoside-diphosphate-sugar epimerase; NAD-dependent epimerase/dehydratase 3410055 6160471 Lcho_3079 Leptothrix cholodnii SP-6 NAD-dependent epimerase/dehydratase YP_001792104.1 3409045 R 395495 CDS YP_001792105.1 171059756 6160472 complement(3410081..3411199) 1 NC_010524.1 PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_3097 glycosyl transferase group 1; group 1 glycosyl transferase 3411199 6160472 Lcho_3080 Leptothrix cholodnii SP-6 group 1 glycosyl transferase YP_001792105.1 3410081 R 395495 CDS YP_001792106.1 171059757 6160473 complement(3411255..3412265) 1 NC_010524.1 KEGG: sgl:SG2199 hypothetical protein; hypothetical protein 3412265 6160473 Lcho_3081 Leptothrix cholodnii SP-6 hypothetical protein YP_001792106.1 3411255 R 395495 CDS YP_001792107.1 171059758 6160474 complement(3412340..3413410) 1 NC_010524.1 hypothetical protein 3413410 6160474 Lcho_3082 Leptothrix cholodnii SP-6 hypothetical protein YP_001792107.1 3412340 R 395495 CDS YP_001792108.1 171059759 6160475 3413494..3413652 1 NC_010524.1 hypothetical protein 3413652 6160475 Lcho_3083 Leptothrix cholodnii SP-6 hypothetical protein YP_001792108.1 3413494 D 395495 CDS YP_001792109.1 171059760 6163472 complement(3413785..3414924) 1 NC_010524.1 PFAM: glycosyl transferase group 1; KEGG: scl:sce8918 glycosyltransferase; group 1 glycosyl transferase 3414924 6163472 Lcho_3084 Leptothrix cholodnii SP-6 group 1 glycosyl transferase YP_001792109.1 3413785 R 395495 CDS YP_001792110.1 171059761 6163473 3415151..3416380 1 NC_010524.1 PFAM: glycosyl transferase group 1; KEGG: acr:Acry_0205 glycosyl transferase, group 1; group 1 glycosyl transferase 3416380 6163473 Lcho_3085 Leptothrix cholodnii SP-6 group 1 glycosyl transferase YP_001792110.1 3415151 D 395495 CDS YP_001792111.1 171059762 6163474 3416377..3417144 1 NC_010524.1 PFAM: protein of unknown function DUF218; KEGG: scl:sce0863 hypothetical protein; hypothetical protein 3417144 6163474 Lcho_3086 Leptothrix cholodnii SP-6 hypothetical protein YP_001792111.1 3416377 D 395495 CDS YP_001792112.1 171059763 6163475 3417234..3418535 1 NC_010524.1 hypothetical protein 3418535 6163475 Lcho_3087 Leptothrix cholodnii SP-6 hypothetical protein YP_001792112.1 3417234 D 395495 CDS YP_001792113.1 171059764 6163476 complement(3418627..3419697) 1 NC_010524.1 hypothetical protein 3419697 6163476 Lcho_3088 Leptothrix cholodnii SP-6 hypothetical protein YP_001792113.1 3418627 R 395495 CDS YP_001792114.1 171059765 6163477 complement(3420762..3421598) 1 NC_010524.1 PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: mpt:Mpe_A1113 putative two-component system, regulatory protein; LytTR family two component transcriptional regulator 3421598 6163477 Lcho_3089 Leptothrix cholodnii SP-6 LytTR family two component transcriptional regulator YP_001792114.1 3420762 R 395495 CDS YP_001792115.1 171059766 6163478 complement(3421601..3422650) 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; KEGG: rfr:Rfer_1711 histidine kinase internal protein; histidine kinase internal region 3422650 6163478 Lcho_3090 Leptothrix cholodnii SP-6 histidine kinase internal region YP_001792115.1 3421601 R 395495 CDS YP_001792116.1 171059767 6162692 3422735..3424165 1 NC_010524.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 3424165 6162692 Lcho_3091 Leptothrix cholodnii SP-6 argininosuccinate lyase YP_001792116.1 3422735 D 395495 CDS YP_001792117.1 171059768 6162693 3424335..3425258 1 NC_010524.1 KEGG: dar:Daro_0889 hypothetical protein; hypothetical protein 3425258 6162693 Lcho_3092 Leptothrix cholodnii SP-6 hypothetical protein YP_001792117.1 3424335 D 395495 CDS YP_001792118.1 171059769 6162694 3425272..3425916 1 NC_010524.1 PFAM: Fimbrial assembly family protein; KEGG: dar:Daro_0890 hypothetical protein; fimbrial assembly family protein 3425916 6162694 Lcho_3093 Leptothrix cholodnii SP-6 fimbrial assembly family protein YP_001792118.1 3425272 D 395495 CDS YP_001792119.1 171059770 6162695 3425913..3426578 1 NC_010524.1 KEGG: pca:Pcar_0383 MshA biogenesis protein, MshJ-like; MshA biogenesis protein, MshJ-like protein 3426578 6162695 Lcho_3094 Leptothrix cholodnii SP-6 MshA biogenesis protein, MshJ-like protein YP_001792119.1 3425913 D 395495 CDS YP_001792120.1 171059771 6162696 3426575..3427135 1 NC_010524.1 hypothetical protein 3427135 6162696 Lcho_3095 Leptothrix cholodnii SP-6 hypothetical protein YP_001792120.1 3426575 D 395495 CDS YP_001792121.1 171059772 6162697 3427135..3428868 1 NC_010524.1 TIGRFAM: pilus (MSHA type) biogenesis protein MshL; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: dar:Daro_0893 type II and III secretion system protein:secretin, N-terminal:secretin/TonB, short N-terminal; pilus (MSHA type) biogenesis protein MshL 3428868 6162697 Lcho_3096 Leptothrix cholodnii SP-6 pilus (MSHA type) biogenesis protein MshL YP_001792121.1 3427135 D 395495 CDS YP_001792122.1 171059773 6162698 3428878..3430614 1 NC_010524.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: dar:Daro_0879 type II secretion system protein E:general secretory system II, protein E, N-terminal; type II secretion system protein E 3430614 6162698 Lcho_3097 Leptothrix cholodnii SP-6 type II secretion system protein E YP_001792122.1 3428878 D 395495 CDS YP_001792123.1 171059774 6161707 3430705..3431943 1 NC_010524.1 PFAM: type II secretion system protein; KEGG: dar:Daro_0880 type II secretion system protein; type II secretion system protein 3431943 6161707 Lcho_3098 Leptothrix cholodnii SP-6 type II secretion system protein YP_001792123.1 3430705 D 395495 CDS YP_001792124.1 171059775 6161708 3431959..3432117 1 NC_010524.1 hypothetical protein 3432117 6161708 Lcho_3099 Leptothrix cholodnii SP-6 hypothetical protein YP_001792124.1 3431959 D 395495 CDS YP_001792125.1 171059776 6161709 3432135..3432545 1 NC_010524.1 KEGG: rfr:Rfer_3363 methylation; hypothetical protein 3432545 6161709 Lcho_3100 Leptothrix cholodnii SP-6 hypothetical protein YP_001792125.1 3432135 D 395495 CDS YP_001792126.1 171059777 6161710 3432597..3435998 1 NC_010524.1 KEGG: spc:Sputcn32_0573 MSHA biogenesis protein MshQ; hypothetical protein 3435998 6161710 Lcho_3101 Leptothrix cholodnii SP-6 hypothetical protein YP_001792126.1 3432597 D 395495 CDS YP_001792127.1 171059778 6161711 3435998..3436471 1 NC_010524.1 KEGG: dar:Daro_0884 prokaryotic N-terminal methylation site; hypothetical protein 3436471 6161711 Lcho_3102 Leptothrix cholodnii SP-6 hypothetical protein YP_001792127.1 3435998 D 395495 CDS YP_001792128.1 171059779 6161712 3436461..3436934 1 NC_010524.1 KEGG: rfr:Rfer_3340 hypothetical protein; hypothetical protein 3436934 6161712 Lcho_3103 Leptothrix cholodnii SP-6 hypothetical protein YP_001792128.1 3436461 D 395495 CDS YP_001792129.1 171059780 6161713 3436924..3437817 1 NC_010524.1 KEGG: rfr:Rfer_3339 methylation; hypothetical protein 3437817 6161713 Lcho_3104 Leptothrix cholodnii SP-6 hypothetical protein YP_001792129.1 3436924 D 395495 CDS YP_001792130.1 171059781 6161362 3437814..3438263 1 NC_010524.1 KEGG: dar:Daro_0887 MSHA biogenesis protein MshP; MSHA biogenesis protein MshP 3438263 6161362 Lcho_3105 Leptothrix cholodnii SP-6 MSHA biogenesis protein MshP YP_001792130.1 3437814 D 395495 CDS YP_001792131.1 171059782 6161363 3438713..3440533 1 NC_010524.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: mpt:Mpe_A3393 putative methanol dehydrogenase protein, large subunit; methanol/ethanol family PQQ-dependent dehydrogenase 3440533 6161363 Lcho_3106 Leptothrix cholodnii SP-6 methanol/ethanol family PQQ-dependent dehydrogenase YP_001792131.1 3438713 D 395495 CDS YP_001792132.1 171059783 6161364 3440678..3441061 1 NC_010524.1 KEGG: mpt:Mpe_A3394 hypothetical protein; hypothetical protein 3441061 6161364 Lcho_3107 Leptothrix cholodnii SP-6 hypothetical protein YP_001792132.1 3440678 D 395495 CDS YP_001792133.1 171059784 6161365 3441058..3441939 1 NC_010524.1 SMART: extracellular solute-binding protein family 3; KEGG: mpt:Mpe_A3395 MxaJ protein; extracellular solute-binding protein 3441939 6161365 Lcho_3108 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001792133.1 3441058 D 395495 CDS YP_001792134.1 171059785 6161366 3441956..3442687 1 NC_010524.1 KEGG: mpt:Mpe_A3397 hypothetical protein; hypothetical protein 3442687 6161366 Lcho_3109 Leptothrix cholodnii SP-6 hypothetical protein YP_001792134.1 3441956 D 395495 CDS YP_001792135.1 171059786 6161367 3442704..3443069 1 NC_010524.1 KEGG: mpt:Mpe_A3398 hypothetical protein; hypothetical protein 3443069 6161367 Lcho_3110 Leptothrix cholodnii SP-6 hypothetical protein YP_001792135.1 3442704 D 395495 CDS YP_001792136.1 171059787 6161368 3443114..3443947 1 NC_010524.1 PFAM: Sulphur oxidation protein SoxZ; KEGG: mpt:Mpe_A2085 hypothetical protein; sulfur oxidation protein SoxZ 3443947 6161368 Lcho_3111 Leptothrix cholodnii SP-6 sulfur oxidation protein SoxZ YP_001792136.1 3443114 D 395495 CDS YP_001792137.1 171059788 6164067 complement(3443959..3444528) 1 NC_010524.1 KEGG: bxe:Bxe_B2422 hypothetical protein; hypothetical protein 3444528 6164067 Lcho_3112 Leptothrix cholodnii SP-6 hypothetical protein YP_001792137.1 3443959 R 395495 CDS YP_001792138.1 171059789 6164068 3444712..3445644 1 NC_010524.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mpt:Mpe_A3013 hypothetical protein; hypothetical protein 3445644 6164068 Lcho_3113 Leptothrix cholodnii SP-6 hypothetical protein YP_001792138.1 3444712 D 395495 CDS YP_001792139.1 171059790 6164069 3445641..3446177 1 NC_010524.1 KEGG: mpt:Mpe_A3014 MxaD protein; MxaD protein 3446177 6164069 Lcho_3114 Leptothrix cholodnii SP-6 MxaD protein YP_001792139.1 3445641 D 395495 CDS YP_001792140.1 171059791 6164070 3446180..3447235 1 NC_010524.1 KEGG: mpt:Mpe_A2189 hypothetical protein; hypothetical protein 3447235 6164070 Lcho_3115 Leptothrix cholodnii SP-6 hypothetical protein YP_001792140.1 3446180 D 395495 CDS YP_001792141.1 171059792 6164071 3447225..3448088 1 NC_010524.1 KEGG: mpt:Mpe_A2188 hypothetical protein; hypothetical protein 3448088 6164071 Lcho_3116 Leptothrix cholodnii SP-6 hypothetical protein YP_001792141.1 3447225 D 395495 CDS YP_001792142.1 171059793 6164072 3448085..3448609 1 NC_010524.1 KEGG: mpt:Mpe_A2187 hypothetical protein; hypothetical protein 3448609 6164072 Lcho_3117 Leptothrix cholodnii SP-6 hypothetical protein YP_001792142.1 3448085 D 395495 CDS YP_001792143.1 171059794 6164073 complement(3448635..3449663) 1 NC_010524.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: mpt:Mpe_A1582 ACR3 permease; arsenical-resistance protein 3449663 6164073 Lcho_3118 Leptothrix cholodnii SP-6 arsenical-resistance protein YP_001792143.1 3448635 R 395495 CDS YP_001792144.1 171059795 6164060 complement(3449737..3450243) 1 NC_010524.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bmu:Bmul_6164 protein tyrosine phosphatase; protein tyrosine phosphatase 3450243 6164060 Lcho_3119 Leptothrix cholodnii SP-6 protein tyrosine phosphatase YP_001792144.1 3449737 R 395495 CDS YP_001792145.1 171059796 6164061 complement(3450261..3450782) 1 NC_010524.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_0488 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3450782 6164061 Lcho_3120 Leptothrix cholodnii SP-6 glyoxalase/bleomycin resistance protein/dioxygenase YP_001792145.1 3450261 R 395495 CDS YP_001792146.1 171059797 6164062 complement(3450796..3451122) 1 NC_010524.1 PFAM: regulatory protein ArsR; KEGG: mpt:Mpe_A1584 TC repressor; ArsR family transcriptional regulator 3451122 6164062 Lcho_3121 Leptothrix cholodnii SP-6 ArsR family transcriptional regulator YP_001792146.1 3450796 R 395495 CDS YP_001792147.1 171059798 6164063 complement(3451198..3451563) 1 NC_010524.1 hypothetical protein 3451563 6164063 Lcho_3122 Leptothrix cholodnii SP-6 hypothetical protein YP_001792147.1 3451198 R 395495 CDS YP_001792148.1 171059799 6164064 complement(3451714..3452796) 1 NC_010524.1 PFAM: transposase IS4 family protein; KEGG: eba:ebA3243 transposase, IS5 family; transposase IS4 family protein 3452796 6164064 Lcho_3123 Leptothrix cholodnii SP-6 transposase IS4 family protein YP_001792148.1 3451714 R 395495 CDS YP_001792149.1 171059800 6164065 complement(3452926..3453519) 1 NC_010524.1 hypothetical protein 3453519 6164065 Lcho_3124 Leptothrix cholodnii SP-6 hypothetical protein YP_001792149.1 3452926 R 395495 CDS YP_001792150.1 171059801 6164066 complement(3453526..3453996) 1 NC_010524.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: hch:HCH_03030 predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 3453996 6164066 Lcho_3125 Leptothrix cholodnii SP-6 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001792150.1 3453526 R 395495 CDS YP_001792151.1 171059802 6160476 complement(3454040..3454378) 1 NC_010524.1 KEGG: reu:Reut_C6417 hypothetical protein; hypothetical protein 3454378 6160476 Lcho_3126 Leptothrix cholodnii SP-6 hypothetical protein YP_001792151.1 3454040 R 395495 CDS YP_001792152.1 171059803 6160477 3454607..3455107 1 NC_010524.1 KEGG: pol:Bpro_5572 transposase IS116/IS110/IS902; hypothetical protein 3455107 6160477 Lcho_3127 Leptothrix cholodnii SP-6 hypothetical protein YP_001792152.1 3454607 D 395495 CDS YP_001792153.1 171059804 6160478 complement(3455538..3456350) 1 NC_010524.1 KEGG: fre:Franean1_2180 response regulator receiver protein; response regulator receiver protein 3456350 6160478 Lcho_3128 Leptothrix cholodnii SP-6 response regulator receiver protein YP_001792153.1 3455538 R 395495 CDS YP_001792154.1 171059805 6160479 3457037..3457528 1 NC_010524.1 PFAM: transposase IS3/IS911 family protein; KEGG: aeh:Mlg_2336 hypothetical protein; transposase IS3/IS911 family protein 3457528 6160479 Lcho_3129 Leptothrix cholodnii SP-6 transposase IS3/IS911 family protein YP_001792154.1 3457037 D 395495 CDS YP_001792155.1 171059806 6160480 3457525..3458568 1 NC_010524.1 PFAM: Integrase catalytic region; KEGG: sbl:Sbal_4350 integrase, catalytic region; integrase catalytic subunit 3458568 6160480 Lcho_3130 Leptothrix cholodnii SP-6 integrase catalytic subunit YP_001792155.1 3457525 D 395495 CDS YP_001792156.1 171059807 6160481 complement(3458631..3459308) 1 NC_010524.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: mpt:Mpe_A2629 putative hydrolase protein; HAD family hydrolase 3459308 6160481 Lcho_3131 Leptothrix cholodnii SP-6 HAD family hydrolase YP_001792156.1 3458631 R 395495 CDS YP_001792157.1 171059808 6160482 complement(3459317..3459862) 1 NC_010524.1 TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: mpt:Mpe_A2627 putative formaldehyde-activating enzyme; formaldehyde-activating enzyme 3459862 6160482 Lcho_3132 Leptothrix cholodnii SP-6 formaldehyde-activating enzyme YP_001792157.1 3459317 R 395495 CDS YP_001792158.1 171059809 6161066 complement(3459906..3460751) 1 NC_010524.1 KEGG: mpt:Mpe_A2626 formylmethanofuran dehydrogenase; TIGRFAM: formylmethanofuran dehydrogenase subunit C; PFAM: glutamate synthase alpha subunit domain protein; formylmethanofuran dehydrogenase subunit C 3460751 6161066 Lcho_3133 Leptothrix cholodnii SP-6 formylmethanofuran dehydrogenase subunit C YP_001792158.1 3459906 R 395495 CDS YP_001792159.1 171059810 6161067 complement(3460748..3461695) 1 NC_010524.1 catalyzes the transfer of a formyl group from formylmethanofuran to tetrahydromethanopterin tetrahydromethanopterin; formylmethanofuran--tetrahydromethanopterin formyltransferase 3461695 6161067 Lcho_3134 Leptothrix cholodnii SP-6 formylmethanofuran--tetrahydromethanopterin formyltransferase YP_001792159.1 3460748 R 395495 CDS YP_001792160.1 171059811 6161068 complement(3461692..3463377) 1 NC_010524.1 TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase 3; KEGG: mpt:Mpe_A2624 formylmethanofurane dehydrogenase, A subunit, putative; formylmethanofuran dehydrogenase subunit A 3463377 6161068 Lcho_3135 Leptothrix cholodnii SP-6 formylmethanofuran dehydrogenase subunit A YP_001792160.1 3461692 R 395495 CDS YP_001792161.1 171059812 6161069 complement(3463374..3464675) 1 NC_010524.1 KEGG: mpt:Mpe_A2623 formylmethanofuran dehydrogenase; formylmethanofuran dehydrogenase 3464675 6161069 Lcho_3136 Leptothrix cholodnii SP-6 formylmethanofuran dehydrogenase YP_001792161.1 3463374 R 395495 CDS YP_001792162.1 171059813 6161070 complement(3464965..3465723) 1 NC_010524.1 PFAM: histidine biosynthesis protein; KEGG: mpt:Mpe_A2622 HisA/HisF family protein, putative; histidine biosynthesis protein 3465723 6161070 Lcho_3137 Leptothrix cholodnii SP-6 histidine biosynthesis protein YP_001792162.1 3464965 R 395495 CDS YP_001792163.1 171059814 6161071 3465778..3466809 1 NC_010524.1 PFAM: protein of unknown function DUF201; KEGG: mpt:Mpe_A2621 hypothetical protein; hypothetical protein 3466809 6161071 Lcho_3138 Leptothrix cholodnii SP-6 hypothetical protein YP_001792163.1 3465778 D 395495 CDS YP_001792164.1 171059815 6161072 3466796..3467947 1 NC_010524.1 TIGRFAM: H4MPT-linked C1 transfer pathway protein; KEGG: mpt:Mpe_A2620 S-layer protein, putative; H4MPT-linked C1 transfer pathway protein 3467947 6161072 Lcho_3139 Leptothrix cholodnii SP-6 H4MPT-linked C1 transfer pathway protein YP_001792164.1 3466796 D 395495 CDS YP_001792165.1 171059816 6162899 3467947..3468540 1 NC_010524.1 PFAM: aspartate/glutamate/uridylate kinase; KEGG: mpt:Mpe_A2619 uncharacterized kinase; aspartate/glutamate/uridylate kinase 3468540 6162899 Lcho_3140 Leptothrix cholodnii SP-6 aspartate/glutamate/uridylate kinase YP_001792165.1 3467947 D 395495 CDS YP_001792166.1 171059817 6162900 complement(3468587..3469345) 1 NC_010524.1 KEGG: mpt:Mpe_A2618 hypothetical protein; hypothetical protein 3469345 6162900 Lcho_3141 Leptothrix cholodnii SP-6 hypothetical protein YP_001792166.1 3468587 R 395495 CDS YP_001792167.1 171059818 6162901 complement(3469345..3469932) 1 NC_010524.1 KEGG: mpt:Mpe_A2617 hypothetical protein; hypothetical protein 3469932 6162901 Lcho_3142 Leptothrix cholodnii SP-6 hypothetical protein YP_001792167.1 3469345 R 395495 CDS YP_001792168.1 171059819 6162902 complement(3469929..3471344) 1 NC_010524.1 PFAM: dihydropteroate synthase DHPS; KEGG: mpt:Mpe_A2616 pterin-binding domain protein; dihydropteroate synthase DHPS 3471344 6162902 Lcho_3143 Leptothrix cholodnii SP-6 dihydropteroate synthase DHPS YP_001792168.1 3469929 R 395495 CDS YP_001792169.1 171059820 6162903 complement(3471323..3471763) 1 NC_010524.1 KEGG: mpt:Mpe_A2615 DNA/pantothenate metabolism flavolike protein; DNA/pantothenate metabolism flavolike protein 3471763 6162903 Lcho_3144 Leptothrix cholodnii SP-6 DNA/pantothenate metabolism flavolike protein YP_001792169.1 3471323 R 395495 CDS YP_001792170.1 171059821 6162904 complement(3471909..3474026) 1 NC_010524.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mpt:Mpe_A2614 putative transcriptional regulator; Fis family GAF modulated sigma54 specific transcriptional regulator 3474026 6162904 Lcho_3145 Leptothrix cholodnii SP-6 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001792170.1 3471909 R 395495 CDS YP_001792171.1 171059822 6162905 3474294..3474824 1 NC_010524.1 PFAM: dihydroneopterin aldolase; KEGG: mpt:Mpe_A2613 dihydroneopterin aldolase-like protein; dihydroneopterin aldolase 3474824 6162905 Lcho_3146 Leptothrix cholodnii SP-6 dihydroneopterin aldolase YP_001792171.1 3474294 D 395495 CDS YP_001792172.1 171059823 6163319 complement(3474886..3475395) 1 NC_010524.1 TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: mpt:Mpe_A2612 formaldehyde-activating enzyme; formaldehyde-activating enzyme 3475395 6163319 Lcho_3147 Leptothrix cholodnii SP-6 formaldehyde-activating enzyme YP_001792172.1 3474886 R 395495 CDS YP_001792173.1 171059824 6163320 complement(3475547..3476443) 1 NC_010524.1 PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: mpt:Mpe_A2611 ATP:dephospho-CoA triphosphoribosyl transferase; triphosphoribosyl-dephospho-CoA protein 3476443 6163320 Lcho_3148 Leptothrix cholodnii SP-6 triphosphoribosyl-dephospho-CoA protein YP_001792173.1 3475547 R 395495 CDS YP_001792174.1 171059825 6163321 complement(3476445..3477443) 1 NC_010524.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: mpt:Mpe_A2610 ribosomal protein S6 modification protein, putative; alpha-L-glutamate ligase 3477443 6163321 Lcho_3149 Leptothrix cholodnii SP-6 alpha-L-glutamate ligase YP_001792174.1 3476445 R 395495 CDS YP_001792175.1 171059826 6163322 complement(3477448..3478452) 1 NC_010524.1 catalyzes the reversible formation of methenyl-H(4)methanopterin from N(5)-formyl-H(4)methanopterin; N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase 3478452 6163322 Lcho_3150 Leptothrix cholodnii SP-6 N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase YP_001792175.1 3477448 R 395495 CDS YP_001792176.1 171059827 6163323 complement(3478449..3479696) 1 NC_010524.1 PFAM: protein of unknown function DUF201; KEGG: mpt:Mpe_A2608 hypothetical protein; hypothetical protein 3479696 6163323 Lcho_3151 Leptothrix cholodnii SP-6 hypothetical protein YP_001792176.1 3478449 R 395495 CDS YP_001792177.1 171059828 6163324 complement(3479693..3480604) 1 NC_010524.1 PFAM: Methylene-tetrahydromethanopterin dehydrogenase; KEGG: mpt:Mpe_A2607 methylene tetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase, putative; methylenetetrahydrofolate dehydrogenase 3480604 6163324 Lcho_3152 Leptothrix cholodnii SP-6 methylenetetrahydrofolate dehydrogenase YP_001792177.1 3479693 R 395495 CDS YP_001792178.1 171059829 6163325 complement(3480610..3481737) 1 NC_010524.1 TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinase; KEGG: mpt:Mpe_A2606 kinase, GHMP family, putative; beta-ribofuranosylaminobenzene 5'-phosphate synthase 3481737 6163325 Lcho_3153 Leptothrix cholodnii SP-6 beta-ribofuranosylaminobenzene 5'-phosphate synthase YP_001792178.1 3480610 R 395495 CDS YP_001792179.1 171059830 6162731 3481989..3482585 1 NC_010524.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mms:mma_2445 phosphinothricin N-acetyltransferase; N-acetyltransferase GCN5 3482585 6162731 Lcho_3154 Leptothrix cholodnii SP-6 N-acetyltransferase GCN5 YP_001792179.1 3481989 D 395495 CDS YP_001792180.1 171059831 6162732 3482695..3483549 1 NC_010524.1 PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mpt:Mpe_A1094 ATPase, AAA family protein; ATPase 3483549 6162732 Lcho_3155 Leptothrix cholodnii SP-6 ATPase YP_001792180.1 3482695 D 395495 CDS YP_001792181.1 171059832 6162733 3483561..3483842 1 NC_010524.1 KEGG: mpt:Mpe_A1093 hypothetical protein; hypothetical protein 3483842 6162733 Lcho_3156 Leptothrix cholodnii SP-6 hypothetical protein YP_001792181.1 3483561 D 395495 CDS YP_001792182.1 171059833 6162734 3483839..3484423 1 NC_010524.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpt:Mpe_A1092 putative amino-acid acetyltransferase; N-acetyltransferase GCN5 3484423 6162734 Lcho_3157 Leptothrix cholodnii SP-6 N-acetyltransferase GCN5 YP_001792182.1 3483839 D 395495 CDS YP_001792183.1 171059834 6162735 3484435..3486441 1 NC_010524.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: slo:Shew_0490 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 3486441 6162735 Lcho_3158 Leptothrix cholodnii SP-6 peptidase S9 prolyl oligopeptidase YP_001792183.1 3484435 D 395495 CDS YP_001792184.1 171059835 6162736 complement(3486419..3487441) 1 NC_010524.1 KEGG: pna:Pnap_0127 poly (3-hydroxybutyrate) depolymerase; poly (3-hydroxybutyrate) depolymerase 3487441 6162736 Lcho_3159 Leptothrix cholodnii SP-6 poly (3-hydroxybutyrate) depolymerase YP_001792184.1 3486419 R 395495 CDS YP_001792185.1 171059836 6162737 3487682..3488863 1 NC_010524.1 KEGG: mpt:Mpe_A1091 hypothetical protein; hypothetical protein 3488863 6162737 Lcho_3160 Leptothrix cholodnii SP-6 hypothetical protein YP_001792185.1 3487682 D 395495 CDS YP_001792186.1 171059837 6161757 3488860..3490800 1 NC_010524.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: mpt:Mpe_A1090 hypothetical protein; surface antigen (D15) 3490800 6161757 Lcho_3161 Leptothrix cholodnii SP-6 surface antigen (D15) YP_001792186.1 3488860 D 395495 CDS YP_001792187.1 171059838 6161758 3490803..3495164 1 NC_010524.1 PFAM: protein of unknown function DUF490; KEGG: mpt:Mpe_A1089 hypothetical protein; hypothetical protein 3495164 6161758 Lcho_3162 Leptothrix cholodnii SP-6 hypothetical protein YP_001792187.1 3490803 D 395495 CDS YP_001792188.1 171059839 6161760 3495456..3496745 1 NC_010524.1 PFAM: integrase family protein; KEGG: mpt:Mpe_A1087 prophage CP4-like integrase; integrase family protein 3496745 6161760 Lcho_3163 Leptothrix cholodnii SP-6 integrase family protein YP_001792188.1 3495456 D 395495 CDS YP_001792189.1 171059840 6161761 3498201..3498656 1 NC_010524.1 hypothetical protein 3498656 6161761 Lcho_3164 Leptothrix cholodnii SP-6 hypothetical protein YP_001792189.1 3498201 D 395495 CDS YP_001792190.1 171059841 6161762 3499024..3499323 1 NC_010524.1 PFAM: transposase IS3/IS911 family protein; KEGG: pol:Bpro_4705 hypothetical protein; transposase IS3/IS911 family protein 3499323 6161762 Lcho_3165 Leptothrix cholodnii SP-6 transposase IS3/IS911 family protein YP_001792190.1 3499024 D 395495 CDS YP_001792191.1 171059842 6161648 3499320..3500207 1 NC_010524.1 PFAM: Integrase catalytic region; KEGG: pol:Bpro_4706 integrase, catalytic region; integrase catalytic subunit 3500207 6161648 Lcho_3166 Leptothrix cholodnii SP-6 integrase catalytic subunit YP_001792191.1 3499320 D 395495 CDS YP_001792192.1 171059843 6161650 3500629..3501099 1 NC_010524.1 TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: asu:Asuc_1243 phage protein, HK97 GP10 family; HK97 family phage protein 3501099 6161650 Lcho_3168 Leptothrix cholodnii SP-6 HK97 family phage protein YP_001792192.1 3500629 D 395495 CDS YP_001792193.1 171059844 6161651 3501147..3501449 1 NC_010524.1 hypothetical protein 3501449 6161651 Lcho_3169 Leptothrix cholodnii SP-6 hypothetical protein YP_001792193.1 3501147 D 395495 CDS YP_001792194.1 171059845 6161652 3502013..3502615 1 NC_010524.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: rme:Rmet_6187 resolvase-like protein; resolvase domain-containing protein 3502615 6161652 Lcho_3170 Leptothrix cholodnii SP-6 resolvase domain-containing protein YP_001792194.1 3502013 D 395495 CDS YP_001792195.1 171059846 6161653 3502655..3502990 1 NC_010524.1 KEGG: eba:ebB86 RelE-like cytotoxic translational repressor of toxin-antitoxin stability system; RelE-like cytotoxic translational repressor of toxin-antitoxin stability system 3502990 6161653 Lcho_3171 Leptothrix cholodnii SP-6 RelE-like cytotoxic translational repressor of toxin-antitoxin stability system YP_001792195.1 3502655 D 395495 CDS YP_001792196.1 171059847 6161654 3502995..3503279 1 NC_010524.1 PFAM: helix-turn-helix domain protein; KEGG: vei:Veis_0468 helix-turn-helix domain protein; XRE family transcriptional regulator 3503279 6161654 Lcho_3172 Leptothrix cholodnii SP-6 XRE family transcriptional regulator YP_001792196.1 3502995 D 395495 CDS YP_001792197.1 171059848 6161595 3503641..3505731 1 NC_010524.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; KEGG: ajs:Ajs_3104 diguanylate cyclase with PAS/PAC sensor; PAS/PAC sensor-containing diguanylate cyclase 3505731 6161595 Lcho_3173 Leptothrix cholodnii SP-6 PAS/PAC sensor-containing diguanylate cyclase YP_001792197.1 3503641 D 395495 CDS YP_001792198.1 171059849 6161596 3505949..3509212 1 NC_010524.1 PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: dar:Daro_2754 PAS; GAF sensor hybrid histidine kinase 3509212 6161596 Lcho_3174 Leptothrix cholodnii SP-6 GAF sensor hybrid histidine kinase YP_001792198.1 3505949 D 395495 CDS YP_001792199.1 171059850 6161597 complement(3509246..3510175) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_0722 transcriptional regulator, LysR family; LysR family transcriptional regulator 3510175 6161597 Lcho_3175 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001792199.1 3509246 R 395495 CDS YP_001792200.1 171059851 6161598 3510295..3511371 1 NC_010524.1 KEGG: rfr:Rfer_0845 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 3511371 6161598 Lcho_3176 Leptothrix cholodnii SP-6 tartrate dehydrogenase YP_001792200.1 3510295 D 395495 CDS YP_001792201.1 171059852 6161599 3511408..3512694 1 NC_010524.1 PFAM: MOFRL domain protein; KEGG: azo:azo1162 probable hydroxypyruvate reductase; hydroxypyruvate reductase 3512694 6161599 Lcho_3177 Leptothrix cholodnii SP-6 hydroxypyruvate reductase YP_001792201.1 3511408 D 395495 CDS YP_001792202.1 171059853 6161600 3512796..3513782 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: pna:Pnap_1017 uncharacterized protein UPF0065; hypothetical protein 3513782 6161600 Lcho_3178 Leptothrix cholodnii SP-6 hypothetical protein YP_001792202.1 3512796 D 395495 CDS YP_001792203.1 171059854 6161601 complement(3513822..3514919) 1 NC_010524.1 PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: eba:ebA3490 hypothetical protein; heat shock protein DnaJ domain-containing protein 3514919 6161601 Lcho_3179 Leptothrix cholodnii SP-6 heat shock protein DnaJ domain-containing protein YP_001792203.1 3513822 R 395495 CDS YP_001792204.1 171059855 6162963 3515150..3516718 1 NC_010524.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mms:mma_2584 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3516718 6162963 Lcho_3180 Leptothrix cholodnii SP-6 methyl-accepting chemotaxis sensory transducer YP_001792204.1 3515150 D 395495 CDS YP_001792205.1 171059856 6162964 complement(3516743..3517471) 1 NC_010524.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll6662 ribitol 2-dehydrogenase; short-chain dehydrogenase/reductase SDR 3517471 6162964 Lcho_3181 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001792205.1 3516743 R 395495 CDS YP_001792206.1 171059857 6162965 complement(3517521..3518468) 1 NC_010524.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: vei:Veis_3165 helix-turn-helix-domain containing protein, AraC type; AraC family transcriptional regulator 3518468 6162965 Lcho_3182 Leptothrix cholodnii SP-6 AraC family transcriptional regulator YP_001792206.1 3517521 R 395495 CDS YP_001792207.1 171059858 6162967 3519450..3520481 1 NC_010524.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: mpt:Mpe_A1486 hypothetical protein; peptidase C14 caspase catalytic subunit p20 3520481 6162967 Lcho_3184 Leptothrix cholodnii SP-6 peptidase C14 caspase catalytic subunit p20 YP_001792207.1 3519450 D 395495 CDS YP_001792208.1 171059859 6162968 3520499..3521908 1 NC_010524.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: rfr:Rfer_1231 hypothetical protein; hypothetical protein 3521908 6162968 Lcho_3185 Leptothrix cholodnii SP-6 hypothetical protein YP_001792208.1 3520499 D 395495 CDS YP_001792209.1 171059860 6162969 3521948..3523882 1 NC_010524.1 KEGG: rfr:Rfer_1231 hypothetical protein; hypothetical protein 3523882 6162969 Lcho_3186 Leptothrix cholodnii SP-6 hypothetical protein YP_001792209.1 3521948 D 395495 CDS YP_001792210.1 171059861 6162789 3523963..3525987 1 NC_010524.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: eba:ebD78 hypothetical protein; hypothetical protein 3525987 6162789 Lcho_3187 Leptothrix cholodnii SP-6 hypothetical protein YP_001792210.1 3523963 D 395495 CDS YP_001792211.1 171059862 6162790 3526060..3527088 1 NC_010524.1 KEGG: mxa:MXAN_4939 hypothetical protein; hypothetical protein 3527088 6162790 Lcho_3188 Leptothrix cholodnii SP-6 hypothetical protein YP_001792211.1 3526060 D 395495 CDS YP_001792212.1 171059863 6162791 3527109..3527741 1 NC_010524.1 KEGG: mxa:MXAN_4941 hypothetical protein; hypothetical protein 3527741 6162791 Lcho_3189 Leptothrix cholodnii SP-6 hypothetical protein YP_001792212.1 3527109 D 395495 CDS YP_001792213.1 171059864 6162792 3527738..3529723 1 NC_010524.1 KEGG: reh:H16_A1654 hypothetical membrane spanning protein; hypothetical protein 3529723 6162792 Lcho_3190 Leptothrix cholodnii SP-6 hypothetical protein YP_001792213.1 3527738 D 395495 CDS YP_001792214.1 171059865 6162793 3529754..3531355 1 NC_010524.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: reh:H16_A1655 choline dehydrogenase; cholesterol oxidase 3531355 6162793 Lcho_3191 Leptothrix cholodnii SP-6 cholesterol oxidase YP_001792214.1 3529754 D 395495 CDS YP_001792215.1 171059866 6162794 3531359..3534160 1 NC_010524.1 KEGG: rfr:Rfer_1230 hypothetical protein; hypothetical protein 3534160 6162794 Lcho_3192 Leptothrix cholodnii SP-6 hypothetical protein YP_001792215.1 3531359 D 395495 CDS YP_001792216.1 171059867 6162795 complement(3534225..3535031) 1 NC_010524.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mpt:Mpe_A3527 oxidoreductase; short-chain dehydrogenase/reductase SDR 3535031 6162795 Lcho_3193 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001792216.1 3534225 R 395495 CDS YP_001792217.1 171059868 6162446 3535193..3536122 1 NC_010524.1 PFAM: alpha/beta hydrolase fold; KEGG: mpt:Mpe_A3619 putative hydrolase; alpha/beta hydrolase fold protein 3536122 6162446 Lcho_3194 Leptothrix cholodnii SP-6 alpha/beta hydrolase fold protein YP_001792217.1 3535193 D 395495 CDS YP_001792218.1 171059869 6162447 3536171..3537973 1 NC_010524.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: xom:XOO_3074 phosphodiesterase; diguanylate cyclase/phosphodiesterase 3537973 6162447 Lcho_3195 Leptothrix cholodnii SP-6 diguanylate cyclase/phosphodiesterase YP_001792218.1 3536171 D 395495 CDS YP_001792219.1 171059870 6162448 3538004..3538675 1 NC_010524.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: mac:MA2988 phosphoribosylanthranilate isomerase; N-(5 -phosphoribosyl)anthranilate isomerase 3538675 6162448 Lcho_3196 Leptothrix cholodnii SP-6 N-(5 -phosphoribosyl)anthranilate isomerase YP_001792219.1 3538004 D 395495 CDS YP_001792220.1 171059871 6162449 complement(3538677..3539654) 1 NC_010524.1 positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose; DNA-binding transcriptional regulator AraC 3539654 6162449 Lcho_3197 Leptothrix cholodnii SP-6 DNA-binding transcriptional regulator AraC YP_001792220.1 3538677 R 395495 CDS YP_001792221.1 171059872 6162450 complement(3539683..3540927) 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: aav:Aave_2252 inner-membrane translocator; monosaccharide-transporting ATPase 3540927 6162450 Lcho_3198 Leptothrix cholodnii SP-6 monosaccharide-transporting ATPase YP_001792221.1 3539683 R 395495 CDS YP_001792222.1 171059873 6162451 complement(3540929..3542452) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_2253 ABC transporter-related protein; ABC transporter-like protein 3542452 6162451 Lcho_3199 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792222.1 3540929 R 395495 CDS YP_001792223.1 171059874 6162452 complement(3542537..3543601) 1 NC_010524.1 KEGG: aav:Aave_2254 sugar ABC transporter, periplasmic sugar-binding protein; sugar ABC transporter periplasmic sugar-binding protein 3543601 6162452 Lcho_3200 Leptothrix cholodnii SP-6 sugar ABC transporter periplasmic sugar-binding protein YP_001792223.1 3542537 R 395495 CDS YP_001792224.1 171059875 6162326 3544251..3545945 1 NC_010524.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase 3545945 6162326 Lcho_3201 Leptothrix cholodnii SP-6 ribulokinase YP_001792224.1 3544251 D 395495 CDS YP_001792225.1 171059876 6162327 3545942..3546676 1 NC_010524.1 PFAM: class II aldolase/adducin family protein; KEGG: cko:CKO_03636 hypothetical protein; L-ribulose-5-phosphate 4-epimerase 3546676 6162327 Lcho_3202 Leptothrix cholodnii SP-6 L-ribulose-5-phosphate 4-epimerase YP_001792225.1 3545942 D 395495 CDS YP_001792226.1 171059877 6162328 3546713..3548206 1 NC_010524.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase 3548206 6162328 Lcho_3203 Leptothrix cholodnii SP-6 L-arabinose isomerase YP_001792226.1 3546713 D 395495 CDS YP_001792227.1 171059878 6162329 complement(3548527..3549480) 1 NC_010524.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: gur:Gura_0276 helix-turn-helix-domain containing protein, AraC type; AraC family transcriptional regulator 3549480 6162329 Lcho_3204 Leptothrix cholodnii SP-6 AraC family transcriptional regulator YP_001792227.1 3548527 R 395495 CDS YP_001792228.1 171059879 6162330 3549637..3550440 1 NC_010524.1 PFAM: protein of unknown function DUF1037; KEGG: smd:Smed_3808 protein of unknown function DUF1037; hypothetical protein 3550440 6162330 Lcho_3205 Leptothrix cholodnii SP-6 hypothetical protein YP_001792228.1 3549637 D 395495 CDS YP_001792229.1 171059880 6162331 3550440..3551549 1 NC_010524.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bha:BH2165 hypothetical protein; oxidoreductase domain-containing protein 3551549 6162331 Lcho_3206 Leptothrix cholodnii SP-6 oxidoreductase domain-containing protein YP_001792229.1 3550440 D 395495 CDS YP_001792230.1 171059881 6162332 3551612..3552817 1 NC_010524.1 PFAM: major facilitator superfamily MFS_1; KEGG: rfr:Rfer_0434 major facilitator superfamily MFS_1; major facilitator transporter 3552817 6162332 Lcho_3207 Leptothrix cholodnii SP-6 major facilitator transporter YP_001792230.1 3551612 D 395495 CDS YP_001792231.1 171059882 6161609 complement(3552861..3553646) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_3475 ABC transporter related; ABC transporter-like protein 3553646 6161609 Lcho_3208 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792231.1 3552861 R 395495 CDS YP_001792232.1 171059883 6161610 complement(3553636..3554286) 1 NC_010524.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3474 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; polar amino acid ABC transporter inner membrane subunit 3554286 6161610 Lcho_3209 Leptothrix cholodnii SP-6 polar amino acid ABC transporter inner membrane subunit YP_001792232.1 3553636 R 395495 CDS YP_001792233.1 171059884 6161611 complement(3554377..3555054) 1 NC_010524.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3473 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; polar amino acid ABC transporter inner membrane subunit 3555054 6161611 Lcho_3210 Leptothrix cholodnii SP-6 polar amino acid ABC transporter inner membrane subunit YP_001792233.1 3554377 R 395495 CDS YP_001792234.1 171059885 6161612 complement(3555088..3555879) 1 NC_010524.1 PFAM: extracellular solute-binding protein family 3; KEGG: pol:Bpro_3472 extracellular solute-binding protein, family 3; extracellular solute-binding protein 3555879 6161612 Lcho_3211 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001792234.1 3555088 R 395495 CDS YP_001792235.1 171059886 6161613 3556092..3557474 1 NC_010524.1 KEGG: rfr:Rfer_2239 coenzyme F390 synthetase-like; coenzyme F390 synthetase-like protein 3557474 6161613 Lcho_3212 Leptothrix cholodnii SP-6 coenzyme F390 synthetase-like protein YP_001792235.1 3556092 D 395495 CDS YP_001792236.1 171059887 6161614 complement(3557476..3559293) 1 NC_010524.1 PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: eba:ebA5073 putative poly-beta-hydroxyalkanoate synthase; poly-beta-hydroxybutyrate polymerase domain-containing protein 3559293 6161614 Lcho_3213 Leptothrix cholodnii SP-6 poly-beta-hydroxybutyrate polymerase domain-containing protein YP_001792236.1 3557476 R 395495 CDS YP_001792237.1 171059888 6161615 3559490..3561496 1 NC_010524.1 PFAM: 5'-Nucleotidase domain protein; KEGG: sde:Sde_0580 alkaline phosphatase; 5'-nucleotidase domain-containing protein 3561496 6161615 Lcho_3214 Leptothrix cholodnii SP-6 5'-nucleotidase domain-containing protein YP_001792237.1 3559490 D 395495 CDS YP_001792238.1 171059889 6161457 complement(3561606..3563336) 1 NC_010524.1 KEGG: maq:Maqu_3484 hypothetical protein; hypothetical protein 3563336 6161457 Lcho_3215 Leptothrix cholodnii SP-6 hypothetical protein YP_001792238.1 3561606 R 395495 CDS YP_001792239.1 171059890 6161458 complement(3563425..3565164) 1 NC_010524.1 PFAM: chemotaxis sensory transducer; KEGG: rfr:Rfer_3609 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3565164 6161458 Lcho_3216 Leptothrix cholodnii SP-6 methyl-accepting chemotaxis sensory transducer YP_001792239.1 3563425 R 395495 CDS YP_001792240.1 171059891 6161459 complement(3565327..3567792) 1 NC_010524.1 PFAM: glycoside hydrolase family 31; KEGG: rso:RSc1081 probable glucosidase protein; Alpha-glucosidase 3567792 6161459 Lcho_3217 Leptothrix cholodnii SP-6 Alpha-glucosidase YP_001792240.1 3565327 R 395495 CDS YP_001792241.1 171059892 6161460 complement(3567793..3569097) 1 NC_010524.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: C4-dicarboxylate anaerobic carrier; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: mmw:Mmwyl1_2782 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 3569097 6161460 Lcho_3218 Leptothrix cholodnii SP-6 TRAP dicarboxylate transporter subunit DctM YP_001792241.1 3567793 R 395495 CDS YP_001792242.1 171059893 6161461 complement(3569094..3569624) 1 NC_010524.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sit:TM1040_3869 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 3569624 6161461 Lcho_3219 Leptothrix cholodnii SP-6 tripartite ATP-independent periplasmic transporter DctQ YP_001792242.1 3569094 R 395495 CDS YP_001792243.1 171059894 6161462 complement(3569643..3570617) 1 NC_010524.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: vvy:VVA1590 TRAP-type C4-dicarboxylate transport system, periplasmic component; TRAP dicarboxylate transporter subunit Dctp 3570617 6161462 Lcho_3220 Leptothrix cholodnii SP-6 TRAP dicarboxylate transporter subunit Dctp YP_001792243.1 3569643 R 395495 CDS YP_001792244.1 171059895 6161463 complement(3570780..3572375) 1 NC_010524.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 3572375 glpD 6161463 glpD Leptothrix cholodnii SP-6 glycerol-3-phosphate dehydrogenase YP_001792244.1 3570780 R 395495 CDS YP_001792245.1 171059896 6161980 3572502..3573275 1 NC_010524.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: reh:H16_A2504 transcriptional regulator, DeoR-family; DeoR family transcriptional regulator 3573275 6161980 Lcho_3222 Leptothrix cholodnii SP-6 DeoR family transcriptional regulator YP_001792245.1 3572502 D 395495 CDS YP_001792246.1 171059897 6161981 3573317..3574810 1 NC_010524.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: rfr:Rfer_3678 glycerol kinase; glycerol kinase 3574810 6161981 Lcho_3223 Leptothrix cholodnii SP-6 glycerol kinase YP_001792246.1 3573317 D 395495 CDS YP_001792247.1 171059898 6161982 3575000..3576253 1 NC_010524.1 PFAM: sodium/hydrogen exchanger; KEGG: bxe:Bxe_A0001 hypothetical protein; sodium/hydrogen exchanger 3576253 6161982 Lcho_3224 Leptothrix cholodnii SP-6 sodium/hydrogen exchanger YP_001792247.1 3575000 D 395495 CDS YP_001792248.1 171059899 6161983 3576250..3577374 1 NC_010524.1 ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity; carboxylate-amine ligase 3577374 6161983 Lcho_3225 Leptothrix cholodnii SP-6 carboxylate-amine ligase YP_001792248.1 3576250 D 395495 CDS YP_001792249.1 171059900 6161984 3577344..3578201 1 NC_010524.1 PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: azo:azo2275 putative glutamine amidotransferase; peptidase C26 3578201 6161984 Lcho_3226 Leptothrix cholodnii SP-6 peptidase C26 YP_001792249.1 3577344 D 395495 CDS YP_001792250.1 171059901 6161985 3578342..3579430 1 NC_010524.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bpm:BURPS1710b_A1187 LacI family regulatory protein; LacI family transcriptional regulator 3579430 6161985 Lcho_3227 Leptothrix cholodnii SP-6 LacI family transcriptional regulator YP_001792250.1 3578342 D 395495 CDS YP_001792251.1 171059902 6161986 complement(3579427..3580962) 1 NC_010524.1 PFAM: FAD dependent oxidoreductase; tryptophan halogenase; KEGG: nar:Saro_1882 tryptophan halogenase; tryptophan halogenase 3580962 6161986 Lcho_3228 Leptothrix cholodnii SP-6 tryptophan halogenase YP_001792251.1 3579427 R 395495 CDS YP_001792252.1 171059903 6162744 complement(3581071..3583698) 1 NC_010524.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_1136 TonB-dependent receptor; TonB-dependent receptor 3583698 6162744 Lcho_3229 Leptothrix cholodnii SP-6 TonB-dependent receptor YP_001792252.1 3581071 R 395495 CDS YP_001792253.1 171059904 6162745 complement(3583882..3585087) 1 NC_010524.1 PFAM: sodium/hydrogen exchanger; KEGG: dar:Daro_4191 sodium/hydrogen exchanger; sodium/hydrogen exchanger 3585087 6162745 Lcho_3230 Leptothrix cholodnii SP-6 sodium/hydrogen exchanger YP_001792253.1 3583882 R 395495 CDS YP_001792254.1 171059905 6162746 complement(3585109..3586329) 1 NC_010524.1 KEGG: bxe:Bxe_A2996 hypothetical protein; hypothetical protein 3586329 6162746 Lcho_3231 Leptothrix cholodnii SP-6 hypothetical protein YP_001792254.1 3585109 R 395495 CDS YP_001792255.1 171059906 6162747 complement(3586341..3586781) 1 NC_010524.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bur:Bcep18194_A5005 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 3586781 6162747 Lcho_3232 Leptothrix cholodnii SP-6 biopolymer transport protein ExbD/TolR YP_001792255.1 3586341 R 395495 CDS YP_001792256.1 171059907 6162748 complement(3586792..3587220) 1 NC_010524.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mpt:Mpe_A1756 biopolymer transport ExbD protein; biopolymer transport protein ExbD/TolR 3587220 6162748 Lcho_3233 Leptothrix cholodnii SP-6 biopolymer transport protein ExbD/TolR YP_001792256.1 3586792 R 395495 CDS YP_001792257.1 171059908 6162749 complement(3587231..3588067) 1 NC_010524.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mpt:Mpe_A1755 biopolymer transport ExbB protein; MotA/TolQ/ExbB proton channel 3588067 6162749 Lcho_3234 Leptothrix cholodnii SP-6 MotA/TolQ/ExbB proton channel YP_001792257.1 3587231 R 395495 CDS YP_001792258.1 171059909 6162750 complement(3588138..3588815) 1 NC_010524.1 TIGRFAM: TonB family protein; KEGG: azo:azo2329 periplasmic biopolymer transport protein linking inner and outer membranes; TonB family protein 3588815 6162750 Lcho_3235 Leptothrix cholodnii SP-6 TonB family protein YP_001792258.1 3588138 R 395495 CDS YP_001792259.1 171059910 6161669 complement(3588840..3589088) 1 NC_010524.1 KEGG: mpt:Mpe_B0598 hypothetical protein; hypothetical protein 3589088 6161669 Lcho_3236 Leptothrix cholodnii SP-6 hypothetical protein YP_001792259.1 3588840 R 395495 CDS YP_001792260.1 171059911 6161670 3589439..3590470 1 NC_010524.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pna:Pnap_0226 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 3590470 6161670 Lcho_3237 Leptothrix cholodnii SP-6 LacI family transcriptional regulator YP_001792260.1 3589439 D 395495 CDS YP_001792261.1 171059912 6161671 complement(3590507..3591583) 1 NC_010524.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpl:BURPS1106A_A2822 transcriptional regulator, LacI family; periplasmic-binding protein/LacI transcriptional regulator 3591583 6161671 Lcho_3238 Leptothrix cholodnii SP-6 periplasmic-binding protein/LacI transcriptional regulator YP_001792261.1 3590507 R 395495 CDS YP_001792262.1 171059913 6161672 complement(3591795..3593219) 1 NC_010524.1 PFAM: glycoside hydrolase family 4; KEGG: rca:Rcas_1884 glycoside hydrolase family 4; glycoside hydrolase family protein 3593219 6161672 Lcho_3239 Leptothrix cholodnii SP-6 glycoside hydrolase family protein YP_001792262.1 3591795 R 395495 CDS YP_001792263.1 171059914 6161673 complement(3593357..3594661) 1 NC_010524.1 PFAM: extracellular solute-binding protein family 1; KEGG: aau:AAur_3361 putative extracellular sugar-binding protein; extracellular solute-binding protein 3594661 6161673 Lcho_3240 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001792263.1 3593357 R 395495 CDS YP_001792264.1 171059915 6161674 complement(3594716..3595642) 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO0272 putative binding-protein-dependent transport protein; binding-protein-dependent transport system inner membrane protein 3595642 6161674 Lcho_3241 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001792264.1 3594716 R 395495 CDS YP_001792265.1 171059916 6161675 complement(3595726..3596679) 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO0271 putative binding-protein-dependent transport protein; binding-protein-dependent transport system inner membrane protein 3596679 6161675 Lcho_3242 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001792265.1 3595726 R 395495 CDS YP_001792266.1 171059917 6160864 3596965..3597999 1 NC_010524.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_2027 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 3597999 6160864 Lcho_3243 Leptothrix cholodnii SP-6 LacI family transcriptional regulator YP_001792266.1 3596965 D 395495 CDS YP_001792267.1 171059918 6160865 3598175..3599347 1 NC_010524.1 PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; KEGG: bpm:BURPS1710b_A1185 maltose/maltodextrin import ATP-binding protein MalK; ABC transporter-like protein 3599347 6160865 Lcho_3244 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792267.1 3598175 D 395495 CDS YP_001792268.1 171059919 6160866 3599372..3601393 1 NC_010524.1 PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; KEGG: bam:Bamb_4931 beta-galactosidase; beta-galactosidase 3601393 6160866 Lcho_3245 Leptothrix cholodnii SP-6 beta-galactosidase YP_001792268.1 3599372 D 395495 CDS YP_001792269.1 171059920 6160867 3601416..3603602 1 NC_010524.1 PFAM: glycoside hydrolase clan GH-D; KEGG: bpl:BURPS1106A_A2815 alpha-galactosidase; glycoside hydrolase clan GH-D 3603602 6160867 Lcho_3246 Leptothrix cholodnii SP-6 glycoside hydrolase clan GH-D YP_001792269.1 3601416 D 395495 CDS YP_001792270.1 171059921 6160868 3603605..3604621 1 NC_010524.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: asa:ASA_2390 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 3604621 6160868 Lcho_3247 Leptothrix cholodnii SP-6 UDP-glucose 4-epimerase YP_001792270.1 3603605 D 395495 CDS YP_001792271.1 171059922 6160869 3604618..3605670 1 NC_010524.1 KEGG: asa:ASA_2391 galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; galactose-1-phosphate uridylyltransferase 3605670 6160869 Lcho_3248 Leptothrix cholodnii SP-6 galactose-1-phosphate uridylyltransferase YP_001792271.1 3604618 D 395495 CDS YP_001792272.1 171059923 6160870 3605684..3606847 1 NC_010524.1 TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: aha:AHA_4105 galactokinase; galactokinase 3606847 6160870 Lcho_3249 Leptothrix cholodnii SP-6 galactokinase YP_001792272.1 3605684 D 395495 CDS YP_001792273.1 171059924 6163576 3606873..3607886 1 NC_010524.1 PFAM: aldo/keto reductase; KEGG: esa:ESA_00850 hypothetical protein; aldo/keto reductase 3607886 6163576 Lcho_3250 Leptothrix cholodnii SP-6 aldo/keto reductase YP_001792273.1 3606873 D 395495 CDS YP_001792274.1 171059925 6163577 complement(3607902..3608612) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dar:Daro_1671 ABC transporter related; ABC transporter-like protein 3608612 6163577 Lcho_3251 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792274.1 3607902 R 395495 CDS YP_001792275.1 171059926 6163578 complement(3608615..3609835) 1 NC_010524.1 PFAM: protein of unknown function DUF214; KEGG: dar:Daro_1672 protein of unknown function DUF214; hypothetical protein 3609835 6163578 Lcho_3252 Leptothrix cholodnii SP-6 hypothetical protein YP_001792275.1 3608615 R 395495 CDS YP_001792276.1 171059927 6163579 complement(3609832..3611025) 1 NC_010524.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pna:Pnap_2837 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 3611025 6163579 Lcho_3253 Leptothrix cholodnii SP-6 RND family efflux transporter MFP subunit YP_001792276.1 3609832 R 395495 CDS YP_001792277.1 171059928 6163580 complement(3611022..3611621) 1 NC_010524.1 PFAM: regulatory protein TetR; KEGG: rfr:Rfer_3622 transcriptional regulator, TetR family; TetR family transcriptional regulator 3611621 6163580 Lcho_3254 Leptothrix cholodnii SP-6 TetR family transcriptional regulator YP_001792277.1 3611022 R 395495 CDS YP_001792278.1 171059929 6163581 3611790..3612908 1 NC_010524.1 TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pna:Pnap_1230 alcohol dehydrogenase, zinc-binding domain protein; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 3612908 6163581 Lcho_3255 Leptothrix cholodnii SP-6 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase YP_001792278.1 3611790 D 395495 CDS YP_001792279.1 171059930 6163582 3612989..3613855 1 NC_010524.1 KEGG: ajs:Ajs_2801 carboxylesterase; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase; S-formylglutathione hydrolase 3613855 6163582 Lcho_3256 Leptothrix cholodnii SP-6 S-formylglutathione hydrolase YP_001792279.1 3612989 D 395495 CDS YP_001792280.1 171059931 6163696 3613902..3615242 1 NC_010524.1 PFAM: Chloride channel core; KEGG: mpt:Mpe_A0110 voltage gated chloride channel family protein; chloride channel core 3615242 6163696 Lcho_3257 Leptothrix cholodnii SP-6 chloride channel core YP_001792280.1 3613902 D 395495 CDS YP_001792281.1 171059932 6163697 complement(3615274..3616548) 1 NC_010524.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mpt:Mpe_A3640 glycolate oxidase iron-sulfur subunit; glycolate oxidase iron-sulfur subunit 3616548 glcF 6163697 glcF Leptothrix cholodnii SP-6 glycolate oxidase iron-sulfur subunit YP_001792281.1 3615274 R 395495 CDS YP_001792282.1 171059933 6163698 complement(3616599..3617729) 1 NC_010524.1 PFAM: FAD linked oxidase domain protein; KEGG: mpt:Mpe_A3639 FAD linked oxidase; FAD linked oxidase domain-containing protein 3617729 6163698 Lcho_3259 Leptothrix cholodnii SP-6 FAD linked oxidase domain-containing protein YP_001792282.1 3616599 R 395495 CDS YP_001792283.1 171059934 6163699 complement(3617755..3619293) 1 NC_010524.1 PFAM: FAD linked oxidase domain protein; KEGG: ajs:Ajs_0425 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 3619293 6163699 Lcho_3260 Leptothrix cholodnii SP-6 FAD linked oxidase domain-containing protein YP_001792283.1 3617755 R 395495 CDS YP_001792284.1 171059935 6163700 complement(3619371..3620630) 1 NC_010524.1 PFAM: domain of unknown function DUF1745; KEGG: mpt:Mpe_A3636 hypothetical protein; hypothetical protein 3620630 6163700 Lcho_3261 Leptothrix cholodnii SP-6 hypothetical protein YP_001792284.1 3619371 R 395495 CDS YP_001792285.1 171059936 6163701 complement(3620680..3621555) 1 NC_010524.1 KEGG: mpt:Mpe_A3635 hypothetical protein; hypothetical protein 3621555 6163701 Lcho_3262 Leptothrix cholodnii SP-6 hypothetical protein YP_001792285.1 3620680 R 395495 CDS YP_001792286.1 171059937 6163702 complement(3621649..3622638) 1 NC_010524.1 PFAM: GumN family protein; KEGG: aav:Aave_0743 GumN family protein; GumN family protein 3622638 6163702 Lcho_3263 Leptothrix cholodnii SP-6 GumN family protein YP_001792286.1 3621649 R 395495 CDS YP_001792287.1 171059938 6163607 complement(3622631..3623617) 1 NC_010524.1 KEGG: mpt:Mpe_A3633 hypothetical protein; hypothetical protein 3623617 6163607 Lcho_3264 Leptothrix cholodnii SP-6 hypothetical protein YP_001792287.1 3622631 R 395495 CDS YP_001792288.1 171059939 6163608 3623669..3624802 1 NC_010524.1 KEGG: pna:Pnap_0301 hypothetical protein; hypothetical protein 3624802 6163608 Lcho_3265 Leptothrix cholodnii SP-6 hypothetical protein YP_001792288.1 3623669 D 395495 CDS YP_001792289.1 171059940 6163609 3624969..3625265 1 NC_010524.1 KEGG: mpt:Mpe_A3630 hypothetical protein; hypothetical protein 3625265 6163609 Lcho_3266 Leptothrix cholodnii SP-6 hypothetical protein YP_001792289.1 3624969 D 395495 CDS YP_001792290.1 171059941 6163610 3625419..3627806 1 NC_010524.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: mpt:Mpe_A0165 putative ATPase protein; ATPase central domain-containing protein 3627806 6163610 Lcho_3267 Leptothrix cholodnii SP-6 ATPase central domain-containing protein YP_001792290.1 3625419 D 395495 CDS YP_001792291.1 171059942 6163611 3627851..3628924 1 NC_010524.1 PFAM: homocysteine S-methyltransferase; KEGG: mpt:Mpe_A0166 5-methyltetrahydrofolate--homocysteine S-methyltransferase; homocysteine S-methyltransferase 3628924 6163611 Lcho_3268 Leptothrix cholodnii SP-6 homocysteine S-methyltransferase YP_001792291.1 3627851 D 395495 CDS YP_001792292.1 171059943 6163612 complement(3628941..3629408) 1 NC_010524.1 KEGG: mpt:Mpe_A0167 outer membrane protein; outer membrane protein 3629408 6163612 Lcho_3269 Leptothrix cholodnii SP-6 outer membrane protein YP_001792292.1 3628941 R 395495 CDS YP_001792293.1 171059944 6163613 3629748..3632522 1 NC_010524.1 KEGG: mpt:Mpe_A0168 5-methyltetrahydrofolate--homocysteine S-methyltransferase; TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein; methionine synthase 3632522 6163613 Lcho_3270 Leptothrix cholodnii SP-6 methionine synthase YP_001792293.1 3629748 D 395495 CDS YP_001792294.1 171059945 6162906 complement(3632544..3635489) 1 NC_010524.1 PFAM: protein of unknown function DUF940 membrane lipoprotein putative; KEGG: bps:BPSS0415 lipoprotein; hypothetical protein 3635489 6162906 Lcho_3271 Leptothrix cholodnii SP-6 hypothetical protein YP_001792294.1 3632544 R 395495 CDS YP_001792295.1 171059946 6162907 complement(3635531..3636229) 1 NC_010524.1 KEGG: bpd:BURPS668_A0656 putative lipoprotein; putative lipoprotein 3636229 6162907 Lcho_3272 Leptothrix cholodnii SP-6 putative lipoprotein YP_001792295.1 3635531 R 395495 CDS YP_001792296.1 171059947 6162908 complement(3636292..3636549) 1 NC_010524.1 KEGG: sfv:SFV_0996 hypothetical protein; hypothetical protein 3636549 6162908 Lcho_3273 Leptothrix cholodnii SP-6 hypothetical protein YP_001792296.1 3636292 R 395495 CDS YP_001792297.1 171059948 6162909 complement(3636737..3637855) 1 NC_010524.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 3637855 6162909 Lcho_3274 Leptothrix cholodnii SP-6 gamma-glutamyl kinase YP_001792297.1 3636737 R 395495 CDS YP_001792298.1 171059949 6162910 complement(3637909..3639018) 1 NC_010524.1 TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; KEGG: mpt:Mpe_A0513 hypothetical protein; GTP-binding protein Obg/CgtA 3639018 6162910 Lcho_3275 Leptothrix cholodnii SP-6 GTP-binding protein Obg/CgtA YP_001792298.1 3637909 R 395495 CDS YP_001792299.1 171059950 6162911 complement(3639108..3639365) 1 NC_010524.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 3639365 rpmA 6162911 rpmA Leptothrix cholodnii SP-6 50S ribosomal protein L27 YP_001792299.1 3639108 R 395495 CDS YP_001792300.1 171059951 6162912 complement(3639396..3639707) 1 NC_010524.1 PFAM: ribosomal protein L21; KEGG: mpt:Mpe_A0511 putative 50S ribosomal protein L21; 50S ribosomal protein L21 3639707 rplU 6162912 rplU Leptothrix cholodnii SP-6 50S ribosomal protein L21 YP_001792300.1 3639396 R 395495 CDS YP_001792301.1 171059952 6162581 3640036..3640977 1 NC_010524.1 PFAM: Polyprenyl synthetase; KEGG: mpt:Mpe_A0510 dimethylallyltransferase; polyprenyl synthetase 3640977 6162581 Lcho_3278 Leptothrix cholodnii SP-6 polyprenyl synthetase YP_001792301.1 3640036 D 395495 CDS YP_001792302.1 171059953 6162583 3641192..3641470 1 NC_010524.1 PFAM: acylphosphatase; KEGG: dar:Daro_1185 acylphosphatase; acylphosphatase 3641470 6162583 Lcho_3279 Leptothrix cholodnii SP-6 acylphosphatase YP_001792302.1 3641192 D 395495 CDS YP_001792303.1 171059954 6162584 3641455..3641715 1 NC_010524.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ajs:Ajs_4153 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 3641715 6162584 Lcho_3280 Leptothrix cholodnii SP-6 4Fe-4S ferredoxin YP_001792303.1 3641455 D 395495 CDS YP_001792304.1 171059955 6162585 3641870..3642034 1 NC_010524.1 hypothetical protein 3642034 6162585 Lcho_3281 Leptothrix cholodnii SP-6 hypothetical protein YP_001792304.1 3641870 D 395495 CDS YP_001792305.1 171059956 6162586 complement(3642095..3643123) 1 NC_010524.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: bte:BTH_I2641 myo-inositol dehydrogenase; oxidoreductase domain-containing protein 3643123 6162586 Lcho_3282 Leptothrix cholodnii SP-6 oxidoreductase domain-containing protein YP_001792305.1 3642095 R 395495 CDS YP_001792306.1 171059957 6162422 complement(3643123..3644118) 1 NC_010524.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bxe:Bxe_A1331 myo-inositol 2-dehydrogenase; inositol 2-dehydrogenase 3644118 6162422 Lcho_3283 Leptothrix cholodnii SP-6 inositol 2-dehydrogenase YP_001792306.1 3643123 R 395495 CDS YP_001792307.1 171059958 6162423 3644426..3645256 1 NC_010524.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rso:RSc1245 putative protein implicated in myo-inositol catabolique pathway; xylose isomerase domain-containing protein 3645256 6162423 Lcho_3284 Leptothrix cholodnii SP-6 xylose isomerase domain-containing protein YP_001792307.1 3644426 D 395495 CDS YP_001792308.1 171059959 6162424 3645281..3646414 1 NC_010524.1 PFAM: regulatory protein LacI; KEGG: bmu:Bmul_0614 transcriptional regulator, LacI family; LacI family transcriptional regulator 3646414 6162424 Lcho_3285 Leptothrix cholodnii SP-6 LacI family transcriptional regulator YP_001792308.1 3645281 D 395495 CDS YP_001792309.1 171059960 6162425 complement(3646440..3650447) 1 NC_010524.1 KEGG: sco:SCO3372 large ATP-binding protein; NACHT family-like NTPase 3650447 6162425 Lcho_3286 Leptothrix cholodnii SP-6 NACHT family-like NTPase YP_001792309.1 3646440 R 395495 CDS YP_001792310.1 171059961 6162426 complement(3650494..3651372) 1 NC_010524.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bam:Bamb_1311 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 3651372 6162426 Lcho_3287 Leptothrix cholodnii SP-6 RpiR family transcriptional regulator YP_001792310.1 3650494 R 395495 CDS YP_001792311.1 171059962 6162427 3651584..3652861 1 NC_010524.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_A6008 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3652861 6162427 Lcho_3288 Leptothrix cholodnii SP-6 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001792311.1 3651584 D 395495 CDS YP_001792312.1 171059963 6162428 3652910..3653707 1 NC_010524.1 PFAM: Ketopantoate hydroxymethyltransferase; KEGG: smd:Smed_5004 ketopantoate hydroxymethyltransferase; ketopantoate hydroxymethyltransferase 3653707 6162428 Lcho_3289 Leptothrix cholodnii SP-6 ketopantoate hydroxymethyltransferase YP_001792312.1 3652910 D 395495 CDS YP_001792313.1 171059964 6162287 3653752..3654600 1 NC_010524.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 3654600 purU 6162287 purU Leptothrix cholodnii SP-6 formyltetrahydrofolate deformylase YP_001792313.1 3653752 D 395495 CDS YP_001792314.1 171059965 6162288 3654597..3655598 1 NC_010524.1 KEGG: bur:Bcep18194_A6012 hypothetical protein; hypothetical protein 3655598 6162288 Lcho_3291 Leptothrix cholodnii SP-6 hypothetical protein YP_001792314.1 3654597 D 395495 CDS YP_001792315.1 171059966 6162289 complement(3655573..3656319) 1 NC_010524.1 PFAM: Integral membrane protein TerC; KEGG: ilo:IL1429 hypothetical protein; integral membrane protein TerC 3656319 6162289 Lcho_3292 Leptothrix cholodnii SP-6 integral membrane protein TerC YP_001792315.1 3655573 R 395495 CDS YP_001792316.1 171059967 6162290 complement(3656422..3659091) 1 NC_010524.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rfr:Rfer_1665 ATPase, E1-E2 type; HAD superfamily P-type ATPase 3659091 6162290 Lcho_3293 Leptothrix cholodnii SP-6 HAD superfamily P-type ATPase YP_001792316.1 3656422 R 395495 CDS YP_001792317.1 171059968 6162291 3659207..3660163 1 NC_010524.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: scl:sce3322 put. D-ribose-binding periplasmic protein; periplasmic-binding protein/LacI transcriptional regulator 3660163 6162291 Lcho_3294 Leptothrix cholodnii SP-6 periplasmic-binding protein/LacI transcriptional regulator YP_001792317.1 3659207 D 395495 CDS YP_001792318.1 171059969 6162292 3660148..3662580 1 NC_010524.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; KEGG: rfr:Rfer_1021 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3662580 6162292 Lcho_3295 Leptothrix cholodnii SP-6 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001792318.1 3660148 D 395495 CDS YP_001792319.1 171059970 6162293 3662602..3663378 1 NC_010524.1 PFAM: pseudouridine synthase; KEGG: ajs:Ajs_2505 pseudouridine synthase; pseudouridine synthase 3663378 6162293 Lcho_3296 Leptothrix cholodnii SP-6 pseudouridine synthase YP_001792319.1 3662602 D 395495 CDS YP_001792320.1 171059971 6162208 complement(3663359..3664801) 1 NC_010524.1 KEGG: cau:Caur_2727 glycosyl hydrolase family 32 domain protein; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; Beta-fructofuranosidase 3664801 6162208 Lcho_3297 Leptothrix cholodnii SP-6 Beta-fructofuranosidase YP_001792320.1 3663359 R 395495 CDS YP_001792321.1 171059972 6162209 complement(3664798..3665964) 1 NC_010524.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: mmw:Mmwyl1_0233 regulatory protein LacI; LacI family transcriptional regulator 3665964 6162209 Lcho_3298 Leptothrix cholodnii SP-6 LacI family transcriptional regulator YP_001792321.1 3664798 R 395495 CDS YP_001792322.1 171059973 6162210 3666209..3667474 1 NC_010524.1 PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_pAT_379 putative sugar transport sugar binding protein; extracellular solute-binding protein 3667474 6162210 Lcho_3299 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001792322.1 3666209 D 395495 CDS YP_001792323.1 171059974 6162211 3667503..3668627 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_pAT_377 ABC transporter sugar permease; binding-protein-dependent transport system inner membrane protein 3668627 6162211 Lcho_3300 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001792323.1 3667503 D 395495 CDS YP_001792324.1 171059975 6162212 3668659..3669534 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_0230 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3669534 6162212 Lcho_3301 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001792324.1 3668659 D 395495 CDS YP_001792325.1 171059976 6162213 3669607..3670611 1 NC_010524.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rle:pRL100256 putative ATP-binding component of ABC transporter; ABC transporter-like protein 3670611 6162213 Lcho_3302 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792325.1 3669607 D 395495 CDS YP_001792326.1 171059977 6162214 complement(3670622..3670933) 1 NC_010524.1 TIGRFAM: Rieske [2Fe-2S] domain protein, MocE subfamily; PFAM: Rieske [2Fe-2S] domain protein; KEGG: bch:Bcen2424_2681 Rieske (2Fe-2S) domain protein, MocE subfamily; Rieske (2Fe-2S) domain-containing protein 3670933 6162214 Lcho_3303 Leptothrix cholodnii SP-6 Rieske (2Fe-2S) domain-containing protein YP_001792326.1 3670622 R 395495 CDS YP_001792327.1 171059978 6161533 complement(3670963..3672039) 1 NC_010524.1 PFAM: fatty acid desaturase; KEGG: bmu:Bmul_0615 fatty acid desaturase; fatty acid desaturase 3672039 6161533 Lcho_3304 Leptothrix cholodnii SP-6 fatty acid desaturase YP_001792327.1 3670963 R 395495 CDS YP_001792328.1 171059979 6161534 3672233..3673285 1 NC_010524.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: hch:HCH_01170 ABC-type sugar transport system, periplasmic component; LacI family transcriptional regulator 3673285 6161534 Lcho_3305 Leptothrix cholodnii SP-6 LacI family transcriptional regulator YP_001792328.1 3672233 D 395495 CDS YP_001792329.1 171059980 6161535 3673361..3673783 1 NC_010524.1 hypothetical protein 3673783 6161535 Lcho_3306 Leptothrix cholodnii SP-6 hypothetical protein YP_001792329.1 3673361 D 395495 CDS YP_001792330.1 171059981 6161536 3673934..3674380 1 NC_010524.1 KEGG: pna:Pnap_4904 hypothetical protein; dual specificity protein phosphatase 3674380 6161536 Lcho_3307 Leptothrix cholodnii SP-6 dual specificity protein phosphatase YP_001792330.1 3673934 D 395495 CDS YP_001792331.1 171059982 6161537 3674579..3675460 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmu:Bmul_5797 transcriptional regulator, LysR family; LysR family transcriptional regulator 3675460 6161537 Lcho_3308 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001792331.1 3674579 D 395495 CDS YP_001792332.1 171059983 6161538 complement(3675474..3675836) 1 NC_010524.1 KEGG: mpt:Mpe_A1928 hypothetical protein; hypothetical protein 3675836 6161538 Lcho_3309 Leptothrix cholodnii SP-6 hypothetical protein YP_001792332.1 3675474 R 395495 CDS YP_001792333.1 171059984 6161539 complement(3675870..3677060) 1 NC_010524.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rle:pRL120541 putative transmembrane GGDEF/EAL domain protein; diguanylate cyclase 3677060 6161539 Lcho_3310 Leptothrix cholodnii SP-6 diguanylate cyclase YP_001792333.1 3675870 R 395495 CDS YP_001792334.1 171059985 6160836 complement(3677172..3678197) 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: bmu:Bmul_1889 monosaccharide-transporting ATPase; monosaccharide-transporting ATPase 3678197 6160836 Lcho_3311 Leptothrix cholodnii SP-6 monosaccharide-transporting ATPase YP_001792334.1 3677172 R 395495 CDS YP_001792335.1 171059986 6160837 complement(3678314..3679861) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmu:Bmul_1890 ABC transporter related; ABC transporter-like protein 3679861 6160837 Lcho_3312 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792335.1 3678314 R 395495 CDS YP_001792336.1 171059987 6160838 complement(3679986..3680915) 1 NC_010524.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rso:RSc1241 putative rhizopine-binding precursor signal peptide protein; periplasmic-binding protein/LacI transcriptional regulator 3680915 6160838 Lcho_3313 Leptothrix cholodnii SP-6 periplasmic-binding protein/LacI transcriptional regulator YP_001792336.1 3679986 R 395495 CDS YP_001792337.1 171059988 6160839 3681143..3683083 1 NC_010524.1 PFAM: PfkB domain protein; KEGG: bmu:Bmul_1892 PfkB domain protein; ribokinase-like domain-containing protein 3683083 6160839 Lcho_3314 Leptothrix cholodnii SP-6 ribokinase-like domain-containing protein YP_001792337.1 3681143 D 395495 CDS YP_001792338.1 171059989 6160840 3683144..3685000 1 NC_010524.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bur:Bcep18194_A4566 acetolactate synthase; thiamine pyrophosphate protein central region 3685000 6160840 Lcho_3315 Leptothrix cholodnii SP-6 thiamine pyrophosphate protein central region YP_001792338.1 3683144 D 395495 CDS YP_001792339.1 171059990 6160841 3685020..3685949 1 NC_010524.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bur:Bcep18194_A4565 xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 3685949 6160841 Lcho_3316 Leptothrix cholodnii SP-6 xylose isomerase domain-containing protein YP_001792339.1 3685020 D 395495 CDS YP_001792340.1 171059991 6160842 3685961..3686758 1 NC_010524.1 PFAM: Myo-inositol catabolism IolB domain protein; KEGG: bam:Bamb_1300 myo-inositol catabolism IolB domain protein; myo-inositol catabolism IolB domain-containing protein 3686758 6160842 Lcho_3317 Leptothrix cholodnii SP-6 myo-inositol catabolism IolB domain-containing protein YP_001792340.1 3685961 D 395495 CDS YP_001792341.1 171059992 6163389 3687110..3688057 1 NC_010524.1 KEGG: pna:Pnap_0225 hypothetical protein; hypothetical protein 3688057 6163389 Lcho_3318 Leptothrix cholodnii SP-6 hypothetical protein YP_001792341.1 3687110 D 395495 CDS YP_001792342.1 171059993 6163390 3688173..3689258 1 NC_010524.1 PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; KEGG: esa:ESA_01983 hypothetical protein; oxidoreductase domain-containing protein 3689258 6163390 Lcho_3319 Leptothrix cholodnii SP-6 oxidoreductase domain-containing protein YP_001792342.1 3688173 D 395495 CDS YP_001792343.1 171059994 6163391 complement(3689566..3693018) 1 NC_010524.1 PFAM: phosphorylase kinase alphabeta; KEGG: amr:AM1_2391 phosphorylase kinase alpha; phosphorylase kinase subunit alpha/beta 3693018 6163391 Lcho_3320 Leptothrix cholodnii SP-6 phosphorylase kinase subunit alpha/beta YP_001792343.1 3689566 R 395495 CDS YP_001792344.1 171059995 6163392 complement(3693125..3695311) 1 NC_010524.1 KEGG: pna:Pnap_1104 1,4-alpha-glucan branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; 1,4-alpha-glucan branching protein 3695311 6163392 Lcho_3321 Leptothrix cholodnii SP-6 1,4-alpha-glucan branching protein YP_001792344.1 3693125 R 395495 CDS YP_001792345.1 171059996 6163393 complement(3695405..3697423) 1 NC_010524.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: art:Arth_2030 alpha amylase, catalytic region; alpha amylase 3697423 6163393 Lcho_3322 Leptothrix cholodnii SP-6 alpha amylase YP_001792345.1 3695405 R 395495 CDS YP_001792346.1 171059997 6163394 complement(3697462..3699174) 1 NC_010524.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: btl:BALH_3635 oligo-1,6-glucosidase; alpha amylase 3699174 6163394 Lcho_3323 Leptothrix cholodnii SP-6 alpha amylase YP_001792346.1 3697462 R 395495 CDS YP_001792347.1 171059998 6163395 complement(3699248..3700384) 1 NC_010524.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: vei:Veis_0947 ABC transporter related; ABC transporter-like protein 3700384 6163395 Lcho_3324 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792347.1 3699248 R 395495 CDS YP_001792348.1 171059999 6163712 complement(3700439..3702109) 1 NC_010524.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mlo:mll5109 alpha-glucosidase; alpha amylase 3702109 6163712 Lcho_3325 Leptothrix cholodnii SP-6 alpha amylase YP_001792348.1 3700439 R 395495 CDS YP_001792349.1 171060000 6163713 complement(3702137..3703780) 1 NC_010524.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: csa:Csal_0261 alpha amylase; alpha amylase 3703780 6163713 Lcho_3326 Leptothrix cholodnii SP-6 alpha amylase YP_001792349.1 3702137 R 395495 CDS YP_001792350.1 171060001 6163714 complement(3703783..3704619) 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_0023 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3704619 6163714 Lcho_3327 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001792350.1 3703783 R 395495 CDS YP_001792351.1 171060002 6163715 complement(3704619..3705533) 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_0259 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3705533 6163715 Lcho_3328 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001792351.1 3704619 R 395495 CDS YP_001792352.1 171060003 6163716 complement(3705631..3706902) 1 NC_010524.1 PFAM: extracellular solute-binding protein family 1; KEGG: hch:HCH_00201 ABC-type sugar transport system, periplasmic component; extracellular solute-binding protein 3706902 6163716 Lcho_3329 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001792352.1 3705631 R 395495 CDS YP_001792353.1 171060004 6163717 3707146..3708996 1 NC_010524.1 glucokinase catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; bifunctional glucokinase/RpiR family transcriptional regulator 3708996 6163717 Lcho_3330 Leptothrix cholodnii SP-6 bifunctional glucokinase/RpiR family transcriptional regulator YP_001792353.1 3707146 D 395495 CDS YP_001792354.1 171060005 6163718 3709076..3710215 1 NC_010524.1 PFAM: Aldose 1-epimerase; KEGG: eca:ECA1388 aldose 1-epimerase; aldose 1-epimerase 3710215 6163718 Lcho_3331 Leptothrix cholodnii SP-6 aldose 1-epimerase YP_001792354.1 3709076 D 395495 CDS YP_001792355.1 171060006 6160766 complement(3710222..3711739) 1 NC_010524.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: mpt:Mpe_A3524 putative transmembrane aldehyde dehydrogenase oxidoreductase protein; methylmalonate-semialdehyde dehydrogenase 3711739 6160766 Lcho_3332 Leptothrix cholodnii SP-6 methylmalonate-semialdehyde dehydrogenase YP_001792355.1 3710222 R 395495 CDS YP_001792356.1 171060007 6160767 3711919..3712863 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_1395 transcriptional regulator, LysR family; LysR family transcriptional regulator 3712863 6160767 Lcho_3333 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001792356.1 3711919 D 395495 CDS YP_001792357.1 171060008 6160768 complement(3712882..3713658) 1 NC_010524.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dac:Daci_4337 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3713658 6160768 Lcho_3334 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001792357.1 3712882 R 395495 CDS YP_001792358.1 171060009 6160769 3713767..3715191 1 NC_010524.1 PFAM: peptidase M48 Ste24p; KEGG: dar:Daro_0246 peptidase M48, Ste24p; peptidase M48 Ste24p 3715191 6160769 Lcho_3335 Leptothrix cholodnii SP-6 peptidase M48 Ste24p YP_001792358.1 3713767 D 395495 CDS YP_001792359.1 171060010 6160770 3715205..3715939 1 NC_010524.1 KEGG: dar:Daro_2990 hypothetical protein; hypothetical protein 3715939 6160770 Lcho_3336 Leptothrix cholodnii SP-6 hypothetical protein YP_001792359.1 3715205 D 395495 CDS YP_001792360.1 171060011 6160771 3715967..3716785 1 NC_010524.1 PFAM: protein of unknown function DUF124; KEGG: mpt:Mpe_A2218 hypothetical protein; hypothetical protein 3716785 6160771 Lcho_3337 Leptothrix cholodnii SP-6 hypothetical protein YP_001792360.1 3715967 D 395495 CDS YP_001792361.1 171060012 6160772 complement(3716893..3717327) 1 NC_010524.1 PFAM: UspA domain protein; KEGG: mpt:Mpe_A2637 hypothetical protein; UspA domain-containing protein 3717327 6160772 Lcho_3338 Leptothrix cholodnii SP-6 UspA domain-containing protein YP_001792361.1 3716893 R 395495 CDS YP_001792362.1 171060013 6161252 complement(3717442..3717633) 1 NC_010524.1 TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: ajs:Ajs_0227 4-oxalocrotonate tautomerase family enzyme; 4-oxalocrotonate tautomerase 3717633 6161252 Lcho_3339 Leptothrix cholodnii SP-6 4-oxalocrotonate tautomerase YP_001792362.1 3717442 R 395495 CDS YP_001792363.1 171060014 6161253 complement(3717677..3718714) 1 NC_010524.1 catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase 3718714 6161253 Lcho_3340 Leptothrix cholodnii SP-6 4-hydroxy-2-ketovalerate aldolase YP_001792363.1 3717677 R 395495 CDS YP_001792364.1 171060015 6161254 complement(3718729..3719646) 1 NC_010524.1 catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase 3719646 6161254 Lcho_3341 Leptothrix cholodnii SP-6 acetaldehyde dehydrogenase YP_001792364.1 3718729 R 395495 CDS YP_001792365.1 171060016 6161255 complement(3719663..3720451) 1 NC_010524.1 KEGG: mpt:Mpe_A2272 4-oxalocrotonate decarboxylase; TIGRFAM: 4-oxalocrotonate decarboxylase; PFAM: Hydratase/decarboxylase; 4-oxalocrotonate decarboxylase 3720451 6161255 Lcho_3342 Leptothrix cholodnii SP-6 4-oxalocrotonate decarboxylase YP_001792365.1 3719663 R 395495 CDS YP_001792366.1 171060017 6161256 complement(3720552..3721334) 1 NC_010524.1 KEGG: reu:Reut_B5691 4-oxalocrotonate decarboxylase; TIGRFAM: 2-oxopent-4-enoate hydratase; PFAM: Hydratase/decarboxylase; 2-oxopent-4-enoate hydratase 3721334 6161256 Lcho_3343 Leptothrix cholodnii SP-6 2-oxopent-4-enoate hydratase YP_001792366.1 3720552 R 395495 CDS YP_001792367.1 171060018 6161257 complement(3721383..3722252) 1 NC_010524.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: vei:Veis_2786 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 3722252 6161257 Lcho_3344 Leptothrix cholodnii SP-6 alpha/beta hydrolase fold protein YP_001792367.1 3721383 R 395495 CDS YP_001792368.1 171060019 6161258 3722424..3723284 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A2279 LysR family transcriptional regulatory protein; LysR family transcriptional regulator 3723284 6161258 Lcho_3345 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001792368.1 3722424 D 395495 CDS YP_001792369.1 171060020 6160711 3723544..3724686 1 NC_010524.1 PFAM: Extracellular ligand-binding receptor; KEGG: har:HEAR0738 putative amino acid ABC transporter; extracellular ligand-binding receptor 3724686 6160711 Lcho_3346 Leptothrix cholodnii SP-6 extracellular ligand-binding receptor YP_001792369.1 3723544 D 395495 CDS YP_001792370.1 171060021 6160712 complement(3724801..3725793) 1 NC_010524.1 PFAM: Integral membrane protein TerC; KEGG: pen:PSEEN3035 hypothetical protein; integral membrane protein TerC 3725793 6160712 Lcho_3347 Leptothrix cholodnii SP-6 integral membrane protein TerC YP_001792370.1 3724801 R 395495 CDS YP_001792371.1 171060022 6160713 3726004..3726885 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A1718 putative LysR-family transcriptional regulator; LysR family transcriptional regulator 3726885 6160713 Lcho_3348 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001792371.1 3726004 D 395495 CDS YP_001792372.1 171060023 6160714 complement(3726896..3727330) 1 NC_010524.1 KEGG: mpt:Mpe_A1719 hypothetical protein; hypothetical protein 3727330 6160714 Lcho_3349 Leptothrix cholodnii SP-6 hypothetical protein YP_001792372.1 3726896 R 395495 CDS YP_001792373.1 171060024 6160715 3727651..3727992 1 NC_010524.1 KEGG: mpt:Mpe_A1725 hypothetical protein; hypothetical protein 3727992 6160715 Lcho_3350 Leptothrix cholodnii SP-6 hypothetical protein YP_001792373.1 3727651 D 395495 CDS YP_001792374.1 171060025 6160716 complement(3728061..3729341) 1 NC_010524.1 PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: rfr:Rfer_0377 putative membrane anion transport protein; citrate transporter 3729341 6160716 Lcho_3351 Leptothrix cholodnii SP-6 citrate transporter YP_001792374.1 3728061 R 395495 CDS YP_001792375.1 171060026 6160330 3729571..3729984 1 NC_010524.1 TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; KEGG: vei:Veis_3009 nucleotidyltransferase substrate binding protein, HI0074 family; nucleotidyltransferase substrate-binding protein 3729984 6160330 Lcho_3352 Leptothrix cholodnii SP-6 nucleotidyltransferase substrate-binding protein YP_001792375.1 3729571 D 395495 CDS YP_001792376.1 171060027 6160331 3729981..3730319 1 NC_010524.1 PFAM: DNA polymerase beta domain protein region; KEGG: xom:XOO_3260 hypothetical protein; DNA polymerase subunit beta 3730319 6160331 Lcho_3353 Leptothrix cholodnii SP-6 DNA polymerase subunit beta YP_001792376.1 3729981 D 395495 CDS YP_001792377.1 171060028 6160332 complement(3730361..3731815) 1 NC_010524.1 TIGRFAM: 2-hydroxymuconic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: reu:Reut_B5689 betaine-aldehyde dehydrogenase; 2-hydroxymuconic semialdehyde dehydrogenase 3731815 6160332 Lcho_3354 Leptothrix cholodnii SP-6 2-hydroxymuconic semialdehyde dehydrogenase YP_001792377.1 3730361 R 395495 CDS YP_001792378.1 171060029 6160333 complement(3731862..3732317) 1 NC_010524.1 PFAM: protein of unknown function DUF336; KEGG: ajs:Ajs_0219 protein of unknown function DUF336; hypothetical protein 3732317 6160333 Lcho_3355 Leptothrix cholodnii SP-6 hypothetical protein YP_001792378.1 3731862 R 395495 CDS YP_001792379.1 171060030 6160334 complement(3732337..3733281) 1 NC_010524.1 TIGRFAM: catechol 2,3 dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vei:Veis_2789 catechol 2,3-dioxygenase; catechol 2,3 dioxygenase 3733281 6160334 Lcho_3356 Leptothrix cholodnii SP-6 catechol 2,3 dioxygenase YP_001792379.1 3732337 R 395495 CDS YP_001792380.1 171060031 6160335 complement(3733281..3733673) 1 NC_010524.1 PFAM: ferredoxin; KEGG: vei:Veis_2790 ferredoxin; ferredoxin 3733673 6160335 Lcho_3357 Leptothrix cholodnii SP-6 ferredoxin YP_001792380.1 3733281 R 395495 CDS YP_001792381.1 171060032 6160336 complement(3733681..3734745) 1 NC_010524.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: vei:Veis_2791 oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD/NAD(P)-binding subunit 3734745 6160336 Lcho_3358 Leptothrix cholodnii SP-6 oxidoreductase FAD/NAD(P)-binding subunit YP_001792381.1 3733681 R 395495 CDS YP_001792382.1 171060033 6161046 complement(3734764..3735120) 1 NC_010524.1 PFAM: Phenol hydroxylase conserved region; KEGG: vei:Veis_2792 phenol hydroxylase conserved region; phenol hydroxylase subunit 3735120 6161046 Lcho_3359 Leptothrix cholodnii SP-6 phenol hydroxylase subunit YP_001792382.1 3734764 R 395495 CDS YP_001792383.1 171060034 6161047 complement(3735117..3736703) 1 NC_010524.1 PFAM: methane/phenol/toluene hydroxylase; YHS domain protein; KEGG: vei:Veis_2793 methane/phenol/toluene hydroxylase; methane/phenol/toluene hydroxylase 3736703 6161047 Lcho_3360 Leptothrix cholodnii SP-6 methane/phenol/toluene hydroxylase YP_001792383.1 3735117 R 395495 CDS YP_001792384.1 171060035 6161048 complement(3736728..3736997) 1 NC_010524.1 PFAM: monooxygenase component MmoB/DmpM; KEGG: vei:Veis_2794 monooxygenase component MmoB/DmpM; monooxygenase component MmoB/DmpM 3736997 6161048 Lcho_3361 Leptothrix cholodnii SP-6 monooxygenase component MmoB/DmpM YP_001792384.1 3736728 R 395495 CDS YP_001792385.1 171060036 6161049 complement(3737030..3738025) 1 NC_010524.1 PFAM: methane/phenol/toluene hydroxylase; KEGG: vei:Veis_2795 methane/phenol/toluene hydroxylase; phenol 2-monooxygenase 3738025 6161049 Lcho_3362 Leptothrix cholodnii SP-6 phenol 2-monooxygenase YP_001792385.1 3737030 R 395495 CDS YP_001792386.1 171060037 6161050 complement(3738073..3738303) 1 NC_010524.1 PFAM: Phenol hydroxylase subunit; KEGG: vei:Veis_2796 phenol hydroxylase subunit; phenol hydroxylase subunit 3738303 6161050 Lcho_3363 Leptothrix cholodnii SP-6 phenol hydroxylase subunit YP_001792386.1 3738073 R 395495 CDS YP_001792387.1 171060038 6161051 3738503..3740260 1 NC_010524.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; 4-vinyl reductase 4VR; Activator of aromatic catabolism; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ajs:Ajs_0205 sigma54 specific transcriptional regulator, fis family; putative sigma-54 specific transcriptional regulator 3740260 6161051 Lcho_3364 Leptothrix cholodnii SP-6 putative sigma-54 specific transcriptional regulator YP_001792387.1 3738503 D 395495 CDS YP_001792388.1 171060039 6161052 3740271..3741014 1 NC_010524.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ajs:Ajs_0204 transcriptional regulator, GntR family; GntR family transcriptional regulator 3741014 6161052 Lcho_3365 Leptothrix cholodnii SP-6 GntR family transcriptional regulator YP_001792388.1 3740271 D 395495 CDS YP_001792389.1 171060040 6161035 complement(3741064..3743352) 1 NC_010524.1 KEGG: dar:Daro_1441 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS/PAC sensor hybrid histidine kinase 3743352 6161035 Lcho_3366 Leptothrix cholodnii SP-6 PAS/PAC sensor hybrid histidine kinase YP_001792389.1 3741064 R 395495 CDS YP_001792390.1 171060041 6161036 complement(3743383..3744321) 1 NC_010524.1 PFAM: Rhodanese domain protein; KEGG: mpt:Mpe_A2636 3-mercaptopyruvate sulfurtransferase; rhodanese domain-containing protein 3744321 6161036 Lcho_3367 Leptothrix cholodnii SP-6 rhodanese domain-containing protein YP_001792390.1 3743383 R 395495 CDS YP_001792391.1 171060042 6161037 complement(3744318..3745205) 1 NC_010524.1 KEGG: mpt:Mpe_A2635 putative transmembrane protein; putative transmembrane protein 3745205 6161037 Lcho_3368 Leptothrix cholodnii SP-6 putative transmembrane protein YP_001792391.1 3744318 R 395495 CDS YP_001792392.1 171060043 6161038 3745343..3746488 1 NC_010524.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: aav:Aave_1298 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 3746488 6161038 Lcho_3369 Leptothrix cholodnii SP-6 glycerophosphoryl diester phosphodiesterase YP_001792392.1 3745343 D 395495 CDS YP_001792393.1 171060044 6161039 complement(3746579..3747745) 1 NC_010524.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: aav:Aave_2012 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 3747745 6161039 Lcho_3370 Leptothrix cholodnii SP-6 Rieske (2Fe-2S) domain-containing protein YP_001792393.1 3746579 R 395495 CDS YP_001792394.1 171060045 6161040 3747965..3748210 1 NC_010524.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: mpt:Mpe_A2633 putative exodeoxyribonuclease small subunit protein; exodeoxyribonuclease VII small subunit 3748210 6161040 Lcho_3371 Leptothrix cholodnii SP-6 exodeoxyribonuclease VII small subunit YP_001792394.1 3747965 D 395495 CDS YP_001792395.1 171060046 6161041 3748207..3749103 1 NC_010524.1 PFAM: Polyprenyl synthetase; KEGG: mpt:Mpe_A2632 geranyltranstransferase; polyprenyl synthetase 3749103 6161041 Lcho_3372 Leptothrix cholodnii SP-6 polyprenyl synthetase YP_001792395.1 3748207 D 395495 CDS YP_001792396.1 171060047 6161073 3749139..3751058 1 NC_010524.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: mpt:Mpe_A2631 putative 1-deoxyxylulose-5-phosphate synthase protein; deoxyxylulose-5-phosphate synthase 3751058 6161073 Lcho_3373 Leptothrix cholodnii SP-6 deoxyxylulose-5-phosphate synthase YP_001792396.1 3749139 D 395495 CDS YP_001792397.1 171060048 6161074 complement(3751072..3752115) 1 NC_010524.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: tbd:Tbd_1431 putative heat shock protein, DnaJ family; heat shock protein DnaJ domain-containing protein 3752115 6161074 Lcho_3374 Leptothrix cholodnii SP-6 heat shock protein DnaJ domain-containing protein YP_001792397.1 3751072 R 395495 CDS YP_001792398.1 171060049 6161075 3752239..3752679 1 NC_010524.1 PFAM: heat shock protein Hsp20; KEGG: eba:ebA2730 heat shock protein, HSP20 family; heat shock protein Hsp20 3752679 6161075 Lcho_3375 Leptothrix cholodnii SP-6 heat shock protein Hsp20 YP_001792398.1 3752239 D 395495 CDS YP_001792399.1 171060050 6161076 3752721..3753113 1 NC_010524.1 PFAM: heat shock protein Hsp20; KEGG: eba:ebB88 putative heat shock protein; heat shock protein Hsp20 3753113 6161076 Lcho_3376 Leptothrix cholodnii SP-6 heat shock protein Hsp20 YP_001792399.1 3752721 D 395495 CDS YP_001792400.1 171060051 6161077 complement(3753147..3753467) 1 NC_010524.1 PFAM: cytochrome c class I; KEGG: psa:PST_0367 hypothetical protein; cytochrome c class I 3753467 6161077 Lcho_3377 Leptothrix cholodnii SP-6 cytochrome c class I YP_001792400.1 3753147 R 395495 CDS YP_001792401.1 171060052 6161078 complement(3753492..3754760) 1 NC_010524.1 KEGG: mes:Meso_1588 putative glucose/sorbosone dehydrogenase; putative glucose/sorbosone dehydrogenase 3754760 6161078 Lcho_3378 Leptothrix cholodnii SP-6 putative glucose/sorbosone dehydrogenase YP_001792401.1 3753492 R 395495 CDS YP_001792402.1 171060053 6161079 3755018..3756973 1 NC_010524.1 PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bbt:BBta_3626 putative sigma-54-dependent transcriptional regulator, HTH fis-type family; putative phytochrome sensor protein 3756973 6161079 Lcho_3379 Leptothrix cholodnii SP-6 putative phytochrome sensor protein YP_001792402.1 3755018 D 395495 CDS YP_001792403.1 171060054 6163364 complement(3756975..3758048) 1 NC_010524.1 KEGG: mpt:Mpe_A3087 putative zinc protease protein; putative zinc protease protein 3758048 6163364 Lcho_3380 Leptothrix cholodnii SP-6 putative zinc protease protein YP_001792403.1 3756975 R 395495 CDS YP_001792404.1 171060055 6163365 complement(3758045..3760168) 1 NC_010524.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mpt:Mpe_A3090 conserved hypothetical oxidoreductase protein; molybdopterin oxidoreductase 3760168 6163365 Lcho_3381 Leptothrix cholodnii SP-6 molybdopterin oxidoreductase YP_001792404.1 3758045 R 395495 CDS YP_001792405.1 171060056 6163366 3760272..3761480 1 NC_010524.1 KEGG: mpt:Mpe_A3092 hippurate hydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 3761480 6163366 Lcho_3382 Leptothrix cholodnii SP-6 amidohydrolase YP_001792405.1 3760272 D 395495 CDS YP_001792406.1 171060057 6163367 3761477..3762154 1 NC_010524.1 PFAM: ThiJ/PfpI domain protein; KEGG: aav:Aave_1967 ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein 3762154 6163367 Lcho_3383 Leptothrix cholodnii SP-6 ThiJ/PfpI domain-containing protein YP_001792406.1 3761477 D 395495 CDS YP_001792407.1 171060058 6163368 complement(3762165..3762785) 1 NC_010524.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mpt:Mpe_A3093 hypothetical protein; HAD family hydrolase 3762785 6163368 Lcho_3384 Leptothrix cholodnii SP-6 HAD family hydrolase YP_001792407.1 3762165 R 395495 CDS YP_001792408.1 171060059 6163369 complement(3762849..3764486) 1 NC_010524.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 3764486 pgi 6163369 pgi Leptothrix cholodnii SP-6 glucose-6-phosphate isomerase YP_001792408.1 3762849 R 395495 CDS YP_001792409.1 171060060 6163370 complement(3764517..3765464) 1 NC_010524.1 KEGG: vei:Veis_1779 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B 3765464 6163370 Lcho_3386 Leptothrix cholodnii SP-6 transaldolase B YP_001792409.1 3764517 R 395495 CDS YP_001792410.1 171060061 6162075 3765716..3767173 1 NC_010524.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 3767173 6162075 Lcho_3387 Leptothrix cholodnii SP-6 glucose-6-phosphate 1-dehydrogenase YP_001792410.1 3765716 D 395495 CDS YP_001792411.1 171060062 6162076 3767281..3768135 1 NC_010524.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: vei:Veis_1778 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 3768135 6162076 Lcho_3388 Leptothrix cholodnii SP-6 RpiR family transcriptional regulator YP_001792411.1 3767281 D 395495 CDS YP_001792412.1 171060063 6162077 complement(3768167..3768430) 1 NC_010524.1 KEGG: rfr:Rfer_2940 sulfate transporter/antisigma-factor antagonist STAS; sulfate transporter/antisigma-factor antagonist STAS 3768430 6162077 Lcho_3389 Leptothrix cholodnii SP-6 sulfate transporter/antisigma-factor antagonist STAS YP_001792412.1 3768167 R 395495 CDS YP_001792413.1 171060064 6162078 complement(3768457..3769071) 1 NC_010524.1 PFAM: toluene tolerance family protein; KEGG: pol:Bpro_0797 toluene tolerance; toluene tolerance family protein 3769071 6162078 Lcho_3390 Leptothrix cholodnii SP-6 toluene tolerance family protein YP_001792413.1 3768457 R 395495 CDS YP_001792414.1 171060065 6162079 complement(3769174..3769983) 1 NC_010524.1 PFAM: VacJ family lipoprotein; KEGG: mpt:Mpe_A3098 putative lipoprotein; VacJ family lipoprotein 3769983 6162079 Lcho_3391 Leptothrix cholodnii SP-6 VacJ family lipoprotein YP_001792414.1 3769174 R 395495 CDS YP_001792415.1 171060066 6162080 complement(3769980..3770462) 1 NC_010524.1 PFAM: Mammalian cell entry related domain protein; KEGG: pol:Bpro_0795 mammalian cell entry related; hypothetical protein 3770462 6162080 Lcho_3392 Leptothrix cholodnii SP-6 hypothetical protein YP_001792415.1 3769980 R 395495 CDS YP_001792416.1 171060067 6162081 complement(3770481..3771260) 1 NC_010524.1 PFAM: protein of unknown function DUF140; KEGG: mpt:Mpe_A3100 hypothetical protein; hypothetical protein 3771260 6162081 Lcho_3393 Leptothrix cholodnii SP-6 hypothetical protein YP_001792416.1 3770481 R 395495 CDS YP_001792417.1 171060068 6163211 complement(3771257..3772093) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A3101 putative ABC transporter ATP-binding subunit; ABC transporter-like protein 3772093 6163211 Lcho_3394 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792417.1 3771257 R 395495 CDS YP_001792418.1 171060069 6163212 complement(3772242..3773717) 1 NC_010524.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 3773717 gltD 6163212 gltD Leptothrix cholodnii SP-6 glutamate synthase subunit beta YP_001792418.1 3772242 R 395495 CDS YP_001792419.1 171060070 6163213 complement(3773784..3778550) 1 NC_010524.1 PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: mpt:Mpe_A3103 glutamate synthase (ferredoxin); glutamate synthase 3778550 6163213 Lcho_3396 Leptothrix cholodnii SP-6 glutamate synthase YP_001792419.1 3773784 R 395495 CDS YP_001792420.1 171060071 6163214 complement(3778713..3779426) 1 NC_010524.1 PFAM: protein of unknown function DUF1568; KEGG: aav:Aave_1007 protein of unknown function DUF1568; hypothetical protein 3779426 6163214 Lcho_3397 Leptothrix cholodnii SP-6 hypothetical protein YP_001792420.1 3778713 R 395495 CDS YP_001792421.1 171060072 6163215 3779521..3780444 1 NC_010524.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mpt:Mpe_A0450 cysteine synthase; cysteine synthase A 3780444 6163215 Lcho_3398 Leptothrix cholodnii SP-6 cysteine synthase A YP_001792421.1 3779521 D 395495 CDS YP_001792422.1 171060073 6163216 complement(3780455..3781600) 1 NC_010524.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 3781600 6163216 Lcho_3399 Leptothrix cholodnii SP-6 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_001792422.1 3780455 R 395495 CDS YP_001792423.1 171060074 6163217 complement(3781713..3782834) 1 NC_010524.1 PFAM: 3-dehydroquinate synthase; KEGG: pna:Pnap_0679 3-dehydroquinate synthase; 3-dehydroquinate synthase 3782834 6163217 Lcho_3400 Leptothrix cholodnii SP-6 3-dehydroquinate synthase YP_001792423.1 3781713 R 395495 CDS YP_001792424.1 171060075 6162833 complement(3782886..3783434) 1 NC_010524.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 3783434 aroK 6162833 aroK Leptothrix cholodnii SP-6 shikimate kinase YP_001792424.1 3782886 R 395495 CDS YP_001792425.1 171060076 6162834 complement(3783635..3785323) 1 NC_010524.1 KEGG: dac:Daci_5576 hypothetical protein; hypothetical protein 3785323 6162834 Lcho_3402 Leptothrix cholodnii SP-6 hypothetical protein YP_001792425.1 3783635 R 395495 CDS YP_001792426.1 171060077 6162835 complement(3785374..3787554) 1 NC_010524.1 TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: mpt:Mpe_A3109 fimbrial biogenesis protein; type IV pilus secretin PilQ 3787554 6162835 Lcho_3403 Leptothrix cholodnii SP-6 type IV pilus secretin PilQ YP_001792426.1 3785374 R 395495 CDS YP_001792427.1 171060078 6162836 complement(3787551..3788111) 1 NC_010524.1 PFAM: Pilus assembly protein PilP; KEGG: mpt:Mpe_A3110 fimbrial assembly protein; pilus assembly protein PilP 3788111 6162836 Lcho_3404 Leptothrix cholodnii SP-6 pilus assembly protein PilP YP_001792427.1 3787551 R 395495 CDS YP_001792428.1 171060079 6162837 complement(3788111..3788827) 1 NC_010524.1 PFAM: Pilus assembly protein PilO; KEGG: mpt:Mpe_A3111 fimbrial assembly protein; pilus assembly protein PilO 3788827 6162837 Lcho_3405 Leptothrix cholodnii SP-6 pilus assembly protein PilO YP_001792428.1 3788111 R 395495 CDS YP_001792429.1 171060080 6162838 complement(3788838..3789476) 1 NC_010524.1 PFAM: Fimbrial assembly family protein; KEGG: mpt:Mpe_A3112 fimbrial assembly protein; fimbrial assembly family protein 3789476 6162838 Lcho_3406 Leptothrix cholodnii SP-6 fimbrial assembly family protein YP_001792429.1 3788838 R 395495 CDS YP_001792430.1 171060081 6162839 complement(3789473..3790531) 1 NC_010524.1 TIGRFAM: type IV pilus assembly protein PilM; KEGG: mpt:Mpe_A3113 fimbrial assembly protein; type IV pilus assembly protein PilM 3790531 6162839 Lcho_3407 Leptothrix cholodnii SP-6 type IV pilus assembly protein PilM YP_001792430.1 3789473 R 395495 CDS YP_001792431.1 171060082 6162415 3790895..3793195 1 NC_010524.1 KEGG: mpt:Mpe_A3114 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; 1A family penicillin-binding protein 3793195 6162415 Lcho_3408 Leptothrix cholodnii SP-6 1A family penicillin-binding protein YP_001792431.1 3790895 D 395495 CDS YP_001792432.1 171060083 6162416 complement(3793245..3793631) 1 NC_010524.1 TIGRFAM: iron donor protein CyaY; PFAM: Frataxin family protein; KEGG: mpt:Mpe_A3115 CyaY protein; iron donor protein CyaY 3793631 6162416 Lcho_3409 Leptothrix cholodnii SP-6 iron donor protein CyaY YP_001792432.1 3793245 R 395495 CDS YP_001792433.1 171060084 6162417 3793901..3795169 1 NC_010524.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mpt:Mpe_A3116 putative diaminopimelate decarboxylase protein; diaminopimelate decarboxylase 3795169 6162417 Lcho_3410 Leptothrix cholodnii SP-6 diaminopimelate decarboxylase YP_001792433.1 3793901 D 395495 CDS YP_001792434.1 171060085 6162418 complement(3795198..3795926) 1 NC_010524.1 KEGG: pol:Bpro_0748 hypothetical protein; hypothetical protein 3795926 6162418 Lcho_3411 Leptothrix cholodnii SP-6 hypothetical protein YP_001792434.1 3795198 R 395495 CDS YP_001792435.1 171060086 6162419 complement(3796165..3797418) 1 NC_010524.1 KEGG: pol:Bpro_0746 outer membrane protein (porin)-like; outer membrane protein (porin)-like protein 3797418 6162419 Lcho_3412 Leptothrix cholodnii SP-6 outer membrane protein (porin)-like protein YP_001792435.1 3796165 R 395495 CDS YP_001792436.1 171060087 6162420 complement(3797581..3798627) 1 NC_010524.1 KEGG: mms:mma_0290 outer membrane porin; outer membrane porin 3798627 6162420 Lcho_3413 Leptothrix cholodnii SP-6 outer membrane porin YP_001792436.1 3797581 R 395495 CDS YP_001792437.1 171060088 6162421 3798894..3799544 1 NC_010524.1 KEGG: pol:Bpro_0745 putative ubiquinone biosynthesis protein; putative ubiquinone biosynthesis protein 3799544 6162421 Lcho_3414 Leptothrix cholodnii SP-6 putative ubiquinone biosynthesis protein YP_001792437.1 3798894 D 395495 CDS YP_001792438.1 171060089 6162068 complement(3799563..3799985) 1 NC_010524.1 PFAM: OsmC family protein; KEGG: mpt:Mpe_A3124 hypothetical protein; OsmC family protein 3799985 6162068 Lcho_3415 Leptothrix cholodnii SP-6 OsmC family protein YP_001792438.1 3799563 R 395495 CDS YP_001792439.1 171060090 6162069 3800461..3801966 1 NC_010524.1 TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Threonine dehydratase domain protein; Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mpt:Mpe_A3125 threonine dehydratase biosynthetic; threonine dehydratase, biosynthetic 3801966 6162069 Lcho_3416 Leptothrix cholodnii SP-6 threonine dehydratase, biosynthetic YP_001792439.1 3800461 D 395495 CDS YP_001792440.1 171060091 6162070 3802003..3803097 1 NC_010524.1 PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; KEGG: mpt:Mpe_A3126 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3803097 6162070 Lcho_3417 Leptothrix cholodnii SP-6 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_001792440.1 3802003 D 395495 CDS YP_001792441.1 171060092 6162071 complement(3803139..3803726) 1 NC_010524.1 KEGG: mpt:Mpe_A3127 general secretion pathway protein C; general secretion pathway protein C 3803726 6162071 Lcho_3418 Leptothrix cholodnii SP-6 general secretion pathway protein C YP_001792441.1 3803139 R 395495 CDS YP_001792442.1 171060093 6162072 3803828..3804280 1 NC_010524.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: mpt:Mpe_A3128 general secretion pathway protein G; general secretion pathway protein G 3804280 6162072 Lcho_3419 Leptothrix cholodnii SP-6 general secretion pathway protein G YP_001792442.1 3803828 D 395495 CDS YP_001792443.1 171060094 6162073 3804255..3804785 1 NC_010524.1 KEGG: mpt:Mpe_A3129 general secretion pathway protein H; general secretion pathway protein H 3804785 6162073 Lcho_3420 Leptothrix cholodnii SP-6 general secretion pathway protein H YP_001792443.1 3804255 D 395495 CDS YP_001792444.1 171060095 6162074 3804811..3805152 1 NC_010524.1 TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: mpt:Mpe_A3130 general secretion pathway protein I; general secretion pathway protein I 3805152 6162074 Lcho_3421 Leptothrix cholodnii SP-6 general secretion pathway protein I YP_001792444.1 3804811 D 395495 CDS YP_001792445.1 171060096 6161875 3805171..3805869 1 NC_010524.1 KEGG: mpt:Mpe_A3131 general secretion pathway protein J; general secretion pathway protein J 3805869 6161875 Lcho_3422 Leptothrix cholodnii SP-6 general secretion pathway protein J YP_001792445.1 3805171 D 395495 CDS YP_001792446.1 171060097 6161876 3805896..3806879 1 NC_010524.1 PFAM: General secretion pathway protein K; KEGG: mpt:Mpe_A3132 general secretion pathway protein K; general secretion pathway protein K 3806879 6161876 Lcho_3423 Leptothrix cholodnii SP-6 general secretion pathway protein K YP_001792446.1 3805896 D 395495 CDS YP_001792447.1 171060098 6161877 3806953..3808239 1 NC_010524.1 PFAM: General secretion pathway L; KEGG: mpt:Mpe_A3133 general secretion pathway protein L; general secretion pathway L 3808239 6161877 Lcho_3424 Leptothrix cholodnii SP-6 general secretion pathway L YP_001792447.1 3806953 D 395495 CDS YP_001792448.1 171060099 6161878 3808236..3808748 1 NC_010524.1 PFAM: General secretion pathway M protein; KEGG: mpt:Mpe_A3134 general secretion pathway protein M; general secretion pathway M protein 3808748 6161878 Lcho_3425 Leptothrix cholodnii SP-6 general secretion pathway M protein YP_001792448.1 3808236 D 395495 CDS YP_001792449.1 171060100 6161879 3808753..3809712 1 NC_010524.1 KEGG: mpt:Mpe_A3135 general secretion pathway protein N; general secretion pathway protein N 3809712 6161879 Lcho_3426 Leptothrix cholodnii SP-6 general secretion pathway protein N YP_001792449.1 3808753 D 395495 CDS YP_001792450.1 171060101 6161880 3809715..3811976 1 NC_010524.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: mpt:Mpe_A3136 general secretion pathway protein D; general secretion pathway protein D 3811976 6161880 Lcho_3427 Leptothrix cholodnii SP-6 general secretion pathway protein D YP_001792450.1 3809715 D 395495 CDS YP_001792451.1 171060102 6161881 3811993..3813408 1 NC_010524.1 KEGG: mpt:Mpe_A3137 pili biogenesis ATPase; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; general secretory pathway protein E 3813408 6161881 Lcho_3428 Leptothrix cholodnii SP-6 general secretory pathway protein E YP_001792451.1 3811993 D 395495 CDS YP_001792452.1 171060103 6163123 3813513..3814730 1 NC_010524.1 TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: mpt:Mpe_A3138 general secretory pathway protein F; general secretion pathway protein F 3814730 6163123 Lcho_3429 Leptothrix cholodnii SP-6 general secretion pathway protein F YP_001792452.1 3813513 D 395495 CDS YP_001792453.1 171060104 6163124 complement(3814793..3831634) 1 NC_010524.1 KEGG: pin:Ping_2394 filamentous haemagglutinin family outer membrane protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Ig family protein; filamentous haemagglutinin domain protein; SMART: Dystroglycan-type cadherin domain protein; filamentous hemagglutinin outer membrane protein 3831634 6163124 Lcho_3430 Leptothrix cholodnii SP-6 filamentous hemagglutinin outer membrane protein YP_001792453.1 3814793 R 395495 CDS YP_001792454.1 171060105 6163125 complement(3831726..3833429) 1 NC_010524.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: mms:mma_1617 hemolysin activation/secretion signal peptide protein; polypeptide-transport-associated domain-containing protein 3833429 6163125 Lcho_3431 Leptothrix cholodnii SP-6 polypeptide-transport-associated domain-containing protein YP_001792454.1 3831726 R 395495 CDS YP_001792455.1 171060106 6163126 3833721..3834734 1 NC_010524.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mpt:Mpe_A3140 putative ATPase; ATPase central domain-containing protein 3834734 6163126 Lcho_3432 Leptothrix cholodnii SP-6 ATPase central domain-containing protein YP_001792455.1 3833721 D 395495 CDS YP_001792456.1 171060107 6163127 complement(3834789..3835544) 1 NC_010524.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: pol:Bpro_0605 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 3835544 6163127 Lcho_3433 Leptothrix cholodnii SP-6 Crp/FNR family transcriptional regulator YP_001792456.1 3834789 R 395495 CDS YP_001792457.1 171060108 6163128 3835738..3837684 1 NC_010524.1 PFAM: AMP-dependent synthetase and ligase; KEGG: pna:Pnap_3607 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 3837684 6163128 Lcho_3434 Leptothrix cholodnii SP-6 AMP-dependent synthetase and ligase YP_001792457.1 3835738 D 395495 CDS YP_001792458.1 171060109 6163129 3837681..3838475 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0469 ABC transporter related; ABC transporter-like protein 3838475 6163129 Lcho_3435 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792458.1 3837681 D 395495 CDS YP_001792459.1 171060110 6160190 3838575..3839504 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: pol:Bpro_0602 inner-membrane translocator; inner-membrane translocator 3839504 6160190 Lcho_3436 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001792459.1 3838575 D 395495 CDS YP_001792460.1 171060111 6160191 3839523..3840587 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: aav:Aave_0784 inner-membrane translocator; inner-membrane translocator 3840587 6160191 Lcho_3437 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001792460.1 3839523 D 395495 CDS YP_001792461.1 171060112 6160192 3840714..3842045 1 NC_010524.1 KEGG: pna:Pnap_3611 hypothetical protein; hypothetical protein 3842045 6160192 Lcho_3438 Leptothrix cholodnii SP-6 hypothetical protein YP_001792461.1 3840714 D 395495 CDS YP_001792462.1 171060113 6160193 3842130..3842942 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_0599 ABC transporter related; ABC transporter-like protein 3842942 6160193 Lcho_3439 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792462.1 3842130 D 395495 CDS YP_001792463.1 171060114 6160194 3843000..3843299 1 NC_010524.1 KEGG: mpt:Mpe_A3142 hypothetical protein; hypothetical protein 3843299 6160194 Lcho_3440 Leptothrix cholodnii SP-6 hypothetical protein YP_001792463.1 3843000 D 395495 CDS YP_001792464.1 171060115 6160195 3843292..3844554 1 NC_010524.1 KEGG: ajs:Ajs_0464 putative phenylacetate-CoA ligase; putative phenylacetate-CoA ligase 3844554 6160195 Lcho_3441 Leptothrix cholodnii SP-6 putative phenylacetate-CoA ligase YP_001792464.1 3843292 D 395495 CDS YP_001792465.1 171060116 6160196 3844669..3845643 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A3143 hypothetical protein; hypothetical protein 3845643 6160196 Lcho_3442 Leptothrix cholodnii SP-6 hypothetical protein YP_001792465.1 3844669 D 395495 CDS YP_001792466.1 171060117 6160276 3845900..3846541 1 NC_010524.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mpt:Mpe_A3148 two component response regulator; two component transcriptional regulator 3846541 6160276 Lcho_3443 Leptothrix cholodnii SP-6 two component transcriptional regulator YP_001792466.1 3845900 D 395495 CDS YP_001792467.1 171060118 6160277 3846534..3847928 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A3149 sensor histidine kinase; histidine kinase 3847928 6160277 Lcho_3444 Leptothrix cholodnii SP-6 histidine kinase YP_001792467.1 3846534 D 395495 CDS YP_001792468.1 171060119 6160278 complement(3847943..3849184) 1 NC_010524.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 3849184 6160278 Lcho_3445 Leptothrix cholodnii SP-6 tyrosyl-tRNA synthetase YP_001792468.1 3847943 R 395495 CDS YP_001792469.1 171060120 6160279 3849360..3850754 1 NC_010524.1 PFAM: peptidase M23B; KEGG: mpt:Mpe_A3151 hypothetical protein; peptidase M23B 3850754 6160279 Lcho_3446 Leptothrix cholodnii SP-6 peptidase M23B YP_001792469.1 3849360 D 395495 CDS YP_001792470.1 171060121 6160280 3850796..3851893 1 NC_010524.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 3851893 anmK 6160280 anmK Leptothrix cholodnii SP-6 anhydro-N-acetylmuramic acid kinase YP_001792470.1 3850796 D 395495 CDS YP_001792471.1 171060122 6160281 complement(3851973..3852338) 1 NC_010524.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: aav:Aave_4049 iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly accessory protein 3852338 6160281 Lcho_3448 Leptothrix cholodnii SP-6 iron-sulfur cluster assembly accessory protein YP_001792471.1 3851973 R 395495 CDS YP_001792472.1 171060123 6160282 complement(3852414..3852836) 1 NC_010524.1 PFAM: protein of unknown function DUF583; KEGG: mpt:Mpe_A3154 hypothetical protein; hypothetical protein 3852836 6160282 Lcho_3449 Leptothrix cholodnii SP-6 hypothetical protein YP_001792472.1 3852414 R 395495 CDS YP_001792473.1 171060124 6159867 complement(3852920..3853633) 1 NC_010524.1 KEGG: mpt:Mpe_A3155 hypothetical protein; hypothetical protein 3853633 6159867 Lcho_3450 Leptothrix cholodnii SP-6 hypothetical protein YP_001792473.1 3852920 R 395495 CDS YP_001792474.1 171060125 6159868 complement(3853814..3854206) 1 NC_010524.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 3854206 rpsI 6159868 rpsI Leptothrix cholodnii SP-6 30S ribosomal protein S9 YP_001792474.1 3853814 R 395495 CDS YP_001792475.1 171060126 6159869 complement(3854216..3854644) 1 NC_010524.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 3854644 rplM 6159869 rplM Leptothrix cholodnii SP-6 50S ribosomal protein L13 YP_001792475.1 3854216 R 395495 CDS YP_001792476.1 171060127 6159870 complement(3854895..3856046) 1 NC_010524.1 PFAM: basic membrane lipoprotein; KEGG: aav:Aave_1135 basic membrane lipoprotein; basic membrane lipoprotein 3856046 6159870 Lcho_3453 Leptothrix cholodnii SP-6 basic membrane lipoprotein YP_001792476.1 3854895 R 395495 CDS YP_001792477.1 171060128 6159871 complement(3856124..3856948) 1 NC_010524.1 KEGG: mpt:Mpe_A0802 hypothetical protein; hypothetical protein 3856948 6159871 Lcho_3454 Leptothrix cholodnii SP-6 hypothetical protein YP_001792477.1 3856124 R 395495 CDS YP_001792478.1 171060129 6159872 complement(3857096..3858016) 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: pol:Bpro_1485 inner-membrane translocator; inner-membrane translocator 3858016 6159872 Lcho_3455 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001792478.1 3857096 R 395495 CDS YP_001792479.1 171060130 6159873 complement(3858035..3859120) 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: dac:Daci_2136 inner-membrane translocator; inner-membrane translocator 3859120 6159873 Lcho_3456 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001792479.1 3858035 R 395495 CDS YP_001792480.1 171060131 6159892 complement(3859107..3860666) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0803 putative sugar ATP binding ABC transporter protein; ABC transporter-like protein 3860666 6159892 Lcho_3457 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792480.1 3859107 R 395495 CDS YP_001792481.1 171060132 6159893 complement(3860725..3862029) 1 NC_010524.1 TIGRFAM: guanine deaminase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: mpt:Mpe_A0801 guanine deaminase; guanine deaminase 3862029 6159893 Lcho_3458 Leptothrix cholodnii SP-6 guanine deaminase YP_001792481.1 3860725 R 395495 CDS YP_001792482.1 171060133 6159894 complement(3862026..3863003) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A0800 putative LysR-family transcriptonal regulator; LysR family transcriptional regulator 3863003 6159894 Lcho_3459 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001792482.1 3862026 R 395495 CDS YP_001792483.1 171060134 6159895 3863110..3864702 1 NC_010524.1 TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: dac:Daci_5910 xanthine dehydrogenase, small subunit; xanthine dehydrogenase small subunit 3864702 6159895 Lcho_3460 Leptothrix cholodnii SP-6 xanthine dehydrogenase small subunit YP_001792483.1 3863110 D 395495 CDS YP_001792484.1 171060135 6159896 3864699..3867062 1 NC_010524.1 KEGG: mpt:Mpe_A0798 xanthine dehydrogenase; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; xanthine dehydrogenase, molybdopterin-binding subunit 3867062 6159896 Lcho_3461 Leptothrix cholodnii SP-6 xanthine dehydrogenase, molybdopterin-binding subunit YP_001792484.1 3864699 D 395495 CDS YP_001792485.1 171060136 6159897 3867076..3867912 1 NC_010524.1 TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: mpt:Mpe_A0797 xanthine dehydrogenase accessory factor; xanthine dehydrogenase accessory protein XdhC 3867912 6159897 Lcho_3462 Leptothrix cholodnii SP-6 xanthine dehydrogenase accessory protein XdhC YP_001792485.1 3867076 D 395495 CDS YP_001792486.1 171060137 6159898 complement(3867949..3871950) 1 NC_010524.1 KEGG: psb:Psyr_2940 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; MASE1 domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 3871950 6159898 Lcho_3463 Leptothrix cholodnii SP-6 multi-sensor hybrid histidine kinase YP_001792486.1 3867949 R 395495 CDS YP_001792487.1 171060138 6159781 complement(3871991..3874105) 1 NC_010524.1 KEGG: tcx:Tcr_1222 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3874105 6159781 Lcho_3464 Leptothrix cholodnii SP-6 response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001792487.1 3871991 R 395495 CDS YP_001792488.1 171060139 6159782 3874533..3877607 1 NC_010524.1 KEGG: azo:azo1687 hypothetical protein; hypothetical protein 3877607 6159782 Lcho_3465 Leptothrix cholodnii SP-6 hypothetical protein YP_001792488.1 3874533 D 395495 CDS YP_001792489.1 171060140 6159784 3880425..3882662 1 NC_010524.1 KEGG: rfr:Rfer_3395 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3882662 6159784 Lcho_3468 Leptothrix cholodnii SP-6 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001792489.1 3880425 D 395495 CDS YP_001792490.1 171060141 6159786 3882930..3884231 1 NC_010524.1 PFAM: integrase family protein; KEGG: bam:Bamb_0912 phage integrase family protein; integrase family protein 3884231 6159786 Lcho_3469 Leptothrix cholodnii SP-6 integrase family protein YP_001792490.1 3882930 D 395495 CDS YP_001792491.1 171060142 6160250 3884339..3884662 1 NC_010524.1 hypothetical protein 3884662 6160250 Lcho_3470 Leptothrix cholodnii SP-6 hypothetical protein YP_001792491.1 3884339 D 395495 CDS YP_001792492.1 171060143 6160251 3884763..3885878 1 NC_010524.1 KEGG: eba:ebA798 hypothetical protein; hypothetical protein 3885878 6160251 Lcho_3471 Leptothrix cholodnii SP-6 hypothetical protein YP_001792492.1 3884763 D 395495 CDS YP_001792493.1 171060144 6160252 3886077..3886301 1 NC_010524.1 hypothetical protein 3886301 6160252 Lcho_3472 Leptothrix cholodnii SP-6 hypothetical protein YP_001792493.1 3886077 D 395495 CDS YP_001792494.1 171060145 6160253 3886311..3886694 1 NC_010524.1 hypothetical protein 3886694 6160253 Lcho_3473 Leptothrix cholodnii SP-6 hypothetical protein YP_001792494.1 3886311 D 395495 CDS YP_001792495.1 171060146 6160254 3887132..3887377 1 NC_010524.1 hypothetical protein 3887377 6160254 Lcho_3474 Leptothrix cholodnii SP-6 hypothetical protein YP_001792495.1 3887132 D 395495 CDS YP_001792496.1 171060147 6160255 3887379..3887945 1 NC_010524.1 hypothetical protein 3887945 6160255 Lcho_3475 Leptothrix cholodnii SP-6 hypothetical protein YP_001792496.1 3887379 D 395495 CDS YP_001792497.1 171060148 6160256 3887942..3888928 1 NC_010524.1 KEGG: asa:ASA_P4G122 DNA primase; hypothetical protein 3888928 6160256 Lcho_3476 Leptothrix cholodnii SP-6 hypothetical protein YP_001792497.1 3887942 D 395495 CDS YP_001792498.1 171060149 6159787 3888921..3890816 1 NC_010524.1 PFAM: protein of unknown function DUF927; KEGG: lpc:LPC_2195 inner membrane protein; hypothetical protein 3890816 6159787 Lcho_3477 Leptothrix cholodnii SP-6 hypothetical protein YP_001792498.1 3888921 D 395495 CDS YP_001792499.1 171060150 6159788 3891202..3891324 1 NC_010524.1 hypothetical protein 3891324 6159788 Lcho_3478 Leptothrix cholodnii SP-6 hypothetical protein YP_001792499.1 3891202 D 395495 CDS YP_001792500.1 171060151 6159789 3891389..3892066 1 NC_010524.1 KEGG: rso:RSc2475 hypothetical protein; hypothetical protein 3892066 6159789 Lcho_3479 Leptothrix cholodnii SP-6 hypothetical protein YP_001792500.1 3891389 D 395495 CDS YP_001792501.1 171060152 6159790 3892256..3892387 1 NC_010524.1 hypothetical protein 3892387 6159790 Lcho_3480 Leptothrix cholodnii SP-6 hypothetical protein YP_001792501.1 3892256 D 395495 CDS YP_001792502.1 171060153 6159793 complement(3893191..3894246) 1 NC_010524.1 KEGG: pna:Pnap_1401 hypothetical protein; hypothetical protein 3894246 6159793 Lcho_3483 Leptothrix cholodnii SP-6 hypothetical protein YP_001792502.1 3893191 R 395495 CDS YP_001792503.1 171060154 6160090 complement(3894380..3895453) 1 NC_010524.1 PFAM: porin Gram-negative type; KEGG: slo:Shew_3260 porin, gram-negative type; porin 3895453 6160090 Lcho_3484 Leptothrix cholodnii SP-6 porin YP_001792503.1 3894380 R 395495 CDS YP_001792504.1 171060155 6160091 complement(3895716..3897437) 1 NC_010524.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: har:HEAR3262 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3897437 6160091 Lcho_3485 Leptothrix cholodnii SP-6 methyl-accepting chemotaxis sensory transducer YP_001792504.1 3895716 R 395495 CDS YP_001792505.1 171060156 6160092 complement(3897635..3898300) 1 NC_010524.1 PFAM: CBS domain containing protein; KEGG: rfr:Rfer_1632 CBS domain containing membrane protein; hypothetical protein 3898300 6160092 Lcho_3486 Leptothrix cholodnii SP-6 hypothetical protein YP_001792505.1 3897635 R 395495 CDS YP_001792506.1 171060157 6160093 complement(3898355..3899380) 1 NC_010524.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 3899380 hrcA 6160093 hrcA Leptothrix cholodnii SP-6 heat-inducible transcription repressor YP_001792506.1 3898355 R 395495 CDS YP_001792507.1 171060158 6160094 3899449..3900369 1 NC_010524.1 catalyzes the phosphorylation of NAD to NADP; NAD(+)/NADH kinase family protein 3900369 ppnK 6160094 ppnK Leptothrix cholodnii SP-6 NAD(+)/NADH kinase family protein YP_001792507.1 3899449 D 395495 CDS YP_001792508.1 171060159 6160095 3900384..3902087 1 NC_010524.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: mpt:Mpe_A3335 putative DNA repair protein; DNA repair protein RecN 3902087 6160095 Lcho_3489 Leptothrix cholodnii SP-6 DNA repair protein RecN YP_001792508.1 3900384 D 395495 CDS YP_001792509.1 171060160 6160096 3902114..3903070 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A3336 hypothetical protein; hypothetical protein 3903070 6160096 Lcho_3490 Leptothrix cholodnii SP-6 hypothetical protein YP_001792509.1 3902114 D 395495 CDS YP_001792510.1 171060161 6160006 3903070..3903699 1 NC_010524.1 PFAM: peptidase S16 lon domain protein; KEGG: mpt:Mpe_A3337 hypothetical protein; peptidase S16 lon domain-containing protein 3903699 6160006 Lcho_3491 Leptothrix cholodnii SP-6 peptidase S16 lon domain-containing protein YP_001792510.1 3903070 D 395495 CDS YP_001792511.1 171060162 6160007 complement(3903716..3904870) 1 NC_010524.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: mpt:Mpe_A3235 putative A/G-specific adenine glycosylase; A/G-specific adenine glycosylase 3904870 6160007 Lcho_3492 Leptothrix cholodnii SP-6 A/G-specific adenine glycosylase YP_001792511.1 3903716 R 395495 CDS YP_001792512.1 171060163 6160008 complement(3904867..3906996) 1 NC_010524.1 KEGG: mpt:Mpe_A3234 hypothetical protein; hypothetical protein 3906996 6160008 Lcho_3493 Leptothrix cholodnii SP-6 hypothetical protein YP_001792512.1 3904867 R 395495 CDS YP_001792513.1 171060164 6160009 complement(3907089..3907919) 1 NC_010524.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 3907919 6160009 Lcho_3494 Leptothrix cholodnii SP-6 formamidopyrimidine-DNA glycosylase YP_001792513.1 3907089 R 395495 CDS YP_001792514.1 171060165 6160010 3907994..3909856 1 NC_010524.1 PFAM: Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: mpt:Mpe_A3232 hypothetical protein; hypothetical protein 3909856 6160010 Lcho_3495 Leptothrix cholodnii SP-6 hypothetical protein YP_001792514.1 3907994 D 395495 CDS YP_001792515.1 171060166 6160011 3909853..3910449 1 NC_010524.1 KEGG: mpt:Mpe_A3231 hypothetical protein; hypothetical protein 3910449 6160011 Lcho_3496 Leptothrix cholodnii SP-6 hypothetical protein YP_001792515.1 3909853 D 395495 CDS YP_001792516.1 171060167 6160012 3910512..3911387 1 NC_010524.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 3911387 ipk 6160012 ipk Leptothrix cholodnii SP-6 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_001792516.1 3910512 D 395495 CDS YP_001792517.1 171060168 6159982 3911601..3912563 1 NC_010524.1 KEGG: mpt:Mpe_A3229 ribose-phosphate diphosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 3912563 6159982 Lcho_3498 Leptothrix cholodnii SP-6 ribose-phosphate pyrophosphokinase YP_001792517.1 3911601 D 395495 CDS YP_001792518.1 171060169 6159983 3912631..3913257 1 NC_010524.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 3913257 6159983 Lcho_3499 Leptothrix cholodnii SP-6 50S ribosomal protein L25/general stress protein Ctc YP_001792518.1 3912631 D 395495 CDS YP_001792519.1 171060170 6159984 3913391..3914032 1 NC_010524.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 3914032 6159984 Lcho_3500 Leptothrix cholodnii SP-6 peptidyl-tRNA hydrolase YP_001792519.1 3913391 D 395495 CDS YP_001792520.1 171060171 6159985 complement(3914042..3914314) 1 NC_010524.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bxe:Bxe_A4137 ferredoxin; 4Fe-4S ferredoxin 3914314 6159985 Lcho_3501 Leptothrix cholodnii SP-6 4Fe-4S ferredoxin YP_001792520.1 3914042 R 395495 CDS YP_001792521.1 171060172 6159986 complement(3914364..3914864) 1 NC_010524.1 KEGG: mpt:Mpe_A3224 pantetheine-phosphate adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase 3914864 6159986 Lcho_3502 Leptothrix cholodnii SP-6 pantetheine-phosphate adenylyltransferase YP_001792521.1 3914364 R 395495 CDS YP_001792522.1 171060173 6160950 complement(3914880..3915542) 1 NC_010524.1 TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein; methyltransferase small; KEGG: mpt:Mpe_A3223 putative methylase; methyltransferase 3915542 6160950 Lcho_3503 Leptothrix cholodnii SP-6 methyltransferase YP_001792522.1 3914880 R 395495 CDS YP_001792523.1 171060174 6160951 3915698..3916738 1 NC_010524.1 KEGG: mpt:Mpe_A3222 putative cell division protein; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 3916738 6160951 Lcho_3504 Leptothrix cholodnii SP-6 signal recognition particle-docking protein FtsY YP_001792523.1 3915698 D 395495 CDS YP_001792524.1 171060175 6160952 complement(3916740..3919235) 1 NC_010524.1 TIGRFAM: secretion ATPase, PEP-CTERM locus subfamily; SMART: AAA ATPase; KEGG: eba:ebA4256 general secretion pathway protein-related protein; secretion ATPase 3919235 6160952 Lcho_3505 Leptothrix cholodnii SP-6 secretion ATPase YP_001792524.1 3916740 R 395495 CDS YP_001792525.1 171060176 6160953 complement(3919246..3920733) 1 NC_010524.1 KEGG: dar:Daro_2400 hypothetical protein; hypothetical protein 3920733 6160953 Lcho_3506 Leptothrix cholodnii SP-6 hypothetical protein YP_001792525.1 3919246 R 395495 CDS YP_001792526.1 171060177 6160954 complement(3920801..3921718) 1 NC_010524.1 KEGG: dar:Daro_2399 probable exopolysaccharide biosynthesis protein; putative exopolysaccharide biosynthesis protein 3921718 6160954 Lcho_3507 Leptothrix cholodnii SP-6 putative exopolysaccharide biosynthesis protein YP_001792526.1 3920801 R 395495 CDS YP_001792527.1 171060178 6160955 complement(3921737..3923290) 1 NC_010524.1 TIGRFAM: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily; PFAM: lipopolysaccharide biosynthesis protein; KEGG: eba:ebA4249 polysaccharide chain length determinant protein; polysaccharide chain length determinant protein 3923290 6160955 Lcho_3508 Leptothrix cholodnii SP-6 polysaccharide chain length determinant protein YP_001792527.1 3921737 R 395495 CDS YP_001792528.1 171060179 6160956 complement(3923414..3924055) 1 NC_010524.1 PFAM: polysaccharide export protein; KEGG: rfr:Rfer_0658 polysaccharide export protein; polysaccharide export protein 3924055 6160956 Lcho_3509 Leptothrix cholodnii SP-6 polysaccharide export protein YP_001792528.1 3923414 R 395495 CDS YP_001792529.1 171060180 6161355 complement(3924279..3925688) 1 NC_010524.1 KEGG: azo:azo3193 glycosyltransferase; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 3925688 6161355 Lcho_3510 Leptothrix cholodnii SP-6 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_001792529.1 3924279 R 395495 CDS YP_001792530.1 171060181 6161356 complement(3925701..3925814) 1 NC_010524.1 hypothetical protein 3925814 6161356 Lcho_3511 Leptothrix cholodnii SP-6 hypothetical protein YP_001792530.1 3925701 R 395495 CDS YP_001792531.1 171060182 6161357 complement(3925964..3926695) 1 NC_010524.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mpt:Mpe_A2735 putative ubiquinone/menaquinone biosynthesis methyltransferase protein; ubiquinone/menaquinone biosynthesis methyltransferase 3926695 6161357 Lcho_3512 Leptothrix cholodnii SP-6 ubiquinone/menaquinone biosynthesis methyltransferase YP_001792531.1 3925964 R 395495 CDS YP_001792532.1 171060183 6161358 complement(3926769..3927176) 1 NC_010524.1 PFAM: protein of unknown function DUF971; KEGG: mpt:Mpe_A2736 hypothetical protein; hypothetical protein 3927176 6161358 Lcho_3513 Leptothrix cholodnii SP-6 hypothetical protein YP_001792532.1 3926769 R 395495 CDS YP_001792533.1 171060184 6161359 complement(3927254..3927997) 1 NC_010524.1 KEGG: aav:Aave_3858 phosphoglycerate mutase 1 family; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 3927997 6161359 Lcho_3514 Leptothrix cholodnii SP-6 phosphoglycerate mutase YP_001792533.1 3927254 R 395495 CDS YP_001792534.1 171060185 6161360 3928069..3928491 1 NC_010524.1 PFAM: Rhodanese domain protein; KEGG: mpt:Mpe_A0714 putative transmembrane protein; rhodanese domain-containing protein 3928491 6161360 Lcho_3515 Leptothrix cholodnii SP-6 rhodanese domain-containing protein YP_001792534.1 3928069 D 395495 CDS YP_001792535.1 171060186 6161361 3928625..3928867 1 NC_010524.1 TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: mpt:Mpe_A0715 glutaredoxin 3; glutaredoxin 3 3928867 6161361 Lcho_3516 Leptothrix cholodnii SP-6 glutaredoxin 3 YP_001792535.1 3928625 D 395495 CDS YP_001792536.1 171060187 6162114 3929012..3930898 1 NC_010524.1 PFAM: K potassium transporter; KEGG: mpt:Mpe_A0174 potassium uptake protein; K potassium transporter 3930898 6162114 Lcho_3517 Leptothrix cholodnii SP-6 K potassium transporter YP_001792536.1 3929012 D 395495 CDS YP_001792537.1 171060188 6162115 complement(3930909..3931514) 1 NC_010524.1 KEGG: mpt:Mpe_A0241 hypothetical protein; hypothetical protein 3931514 6162115 Lcho_3518 Leptothrix cholodnii SP-6 hypothetical protein YP_001792537.1 3930909 R 395495 CDS YP_001792538.1 171060189 6162116 complement(3931535..3934327) 1 NC_010524.1 PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: mpt:Mpe_A0242 glutamate-ammonia-ligase adenylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 3934327 6162116 Lcho_3519 Leptothrix cholodnii SP-6 (glutamate--ammonia-ligase) adenylyltransferase YP_001792538.1 3931535 R 395495 CDS YP_001792539.1 171060190 6162117 3934432..3938784 1 NC_010524.1 KEGG: mpt:Mpe_A0243 putative transmembrane protein; putative transmembrane protein 3938784 6162117 Lcho_3520 Leptothrix cholodnii SP-6 putative transmembrane protein YP_001792539.1 3934432 D 395495 CDS YP_001792540.1 171060191 6162118 3938819..3939637 1 NC_010524.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mpt:Mpe_A0244 putative nitrilase protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3939637 6162118 Lcho_3521 Leptothrix cholodnii SP-6 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001792540.1 3938819 D 395495 CDS YP_001792541.1 171060192 6162119 complement(3939695..3940951) 1 NC_010524.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: mpt:Mpe_A0245 putative 2-octaprenyl-6-methoxyphenol hydroxylase oxidoreductase protein; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 3940951 6162119 Lcho_3522 Leptothrix cholodnii SP-6 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase YP_001792541.1 3939695 R 395495 CDS YP_001792542.1 171060193 6162120 complement(3941057..3943174) 1 NC_010524.1 KEGG: mpt:Mpe_A0133 putative primosomal protein; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; primosomal protein N' 3943174 6162120 Lcho_3523 Leptothrix cholodnii SP-6 primosomal protein N' YP_001792542.1 3941057 R 395495 CDS YP_001792543.1 171060194 6161803 complement(3943536..3944606) 1 NC_010524.1 KEGG: pol:Bpro_4264 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 3944606 6161803 Lcho_3524 Leptothrix cholodnii SP-6 uroporphyrinogen decarboxylase YP_001792543.1 3943536 R 395495 CDS YP_001792544.1 171060195 6161804 complement(3944716..3945093) 1 NC_010524.1 TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: mpt:Mpe_A0198 putative ATP synthase epsilon chain protein; ATP synthase F1 subunit epsilon 3945093 6161804 Lcho_3525 Leptothrix cholodnii SP-6 ATP synthase F1 subunit epsilon YP_001792544.1 3944716 R 395495 CDS YP_001792545.1 171060196 6161805 complement(3945218..3946642) 1 NC_010524.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 3946642 6161805 Lcho_3526 Leptothrix cholodnii SP-6 F0F1 ATP synthase subunit beta YP_001792545.1 3945218 R 395495 CDS YP_001792546.1 171060197 6161806 complement(3946776..3947657) 1 NC_010524.1 KEGG: mpt:Mpe_A0196 sodium-transporting two-sector ATPase; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; ATP synthase F1 subunit gamma 3947657 6161806 Lcho_3527 Leptothrix cholodnii SP-6 ATP synthase F1 subunit gamma YP_001792546.1 3946776 R 395495 CDS YP_001792547.1 171060198 6161807 complement(3947691..3949229) 1 NC_010524.1 KEGG: mpt:Mpe_A0195 sodium-transporting two-sector ATPase; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 alpha subunit; ATP synthase F1 subunit alpha 3949229 6161807 Lcho_3528 Leptothrix cholodnii SP-6 ATP synthase F1 subunit alpha YP_001792547.1 3947691 R 395495 CDS YP_001792548.1 171060199 6161808 complement(3949336..3949869) 1 NC_010524.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 3949869 6161808 Lcho_3529 Leptothrix cholodnii SP-6 F0F1 ATP synthase subunit delta YP_001792548.1 3949336 R 395495 CDS YP_001792549.1 171060200 6161809 complement(3949872..3950342) 1 NC_010524.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 3950342 6161809 Lcho_3530 Leptothrix cholodnii SP-6 F0F1 ATP synthase subunit B YP_001792549.1 3949872 R 395495 CDS YP_001792550.1 171060201 6161271 complement(3950393..3950641) 1 NC_010524.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 3950641 6161271 Lcho_3531 Leptothrix cholodnii SP-6 F0F1 ATP synthase subunit C YP_001792550.1 3950393 R 395495 CDS YP_001792551.1 171060202 6161272 complement(3950713..3951609) 1 NC_010524.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 3951609 6161272 Lcho_3532 Leptothrix cholodnii SP-6 F0F1 ATP synthase subunit A YP_001792551.1 3950713 R 395495 CDS YP_001792552.1 171060203 6161273 complement(3951632..3952126) 1 NC_010524.1 KEGG: mpt:Mpe_A0190 putative ATP synthase protein I AtpI; putative ATP synthase protein I AtpI 3952126 6161273 Lcho_3533 Leptothrix cholodnii SP-6 putative ATP synthase protein I AtpI YP_001792552.1 3951632 R 395495 CDS YP_001792553.1 171060204 6161274 complement(3952363..3953262) 1 NC_010524.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: mms:mma_0269 gluconolactonase; SMP-30/gluconolaconase/LRE domain-containing protein 3953262 6161274 Lcho_3534 Leptothrix cholodnii SP-6 SMP-30/gluconolaconase/LRE domain-containing protein YP_001792553.1 3952363 R 395495 CDS YP_001792554.1 171060205 6161275 complement(3953390..3953884) 1 NC_010524.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpt:Mpe_A0188 putative acetyltransferase; N-acetyltransferase GCN5 3953884 6161275 Lcho_3535 Leptothrix cholodnii SP-6 N-acetyltransferase GCN5 YP_001792554.1 3953390 R 395495 CDS YP_001792555.1 171060206 6161276 complement(3953909..3954568) 1 NC_010524.1 PFAM: cytochrome B561; KEGG: vei:Veis_1276 cytochrome b561; cytochrome B561 3954568 6161276 Lcho_3536 Leptothrix cholodnii SP-6 cytochrome B561 YP_001792555.1 3953909 R 395495 CDS YP_001792556.1 171060207 6161277 3954826..3955278 1 NC_010524.1 PFAM: cytochrome c prime; KEGG: pna:Pnap_0216 cytochrome c, class II; cytochrome c prime 3955278 6161277 Lcho_3537 Leptothrix cholodnii SP-6 cytochrome c prime YP_001792556.1 3954826 D 395495 CDS YP_001792557.1 171060208 6160910 complement(3955388..3956239) 1 NC_010524.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: mpt:Mpe_A0187 phenazine biosynthesis protein, PhzF family; PhzF family phenazine biosynthesis protein 3956239 6160910 Lcho_3538 Leptothrix cholodnii SP-6 PhzF family phenazine biosynthesis protein YP_001792557.1 3955388 R 395495 CDS YP_001792558.1 171060209 6160911 complement(3956257..3957480) 1 NC_010524.1 PFAM: aminotransferase class I and II; KEGG: mpt:Mpe_A0186 valine-pyruvate aminotransferase; GntR family transcriptional regulator 3957480 6160911 Lcho_3539 Leptothrix cholodnii SP-6 GntR family transcriptional regulator YP_001792558.1 3956257 R 395495 CDS YP_001792559.1 171060210 6160912 complement(3957544..3958470) 1 NC_010524.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mpt:Mpe_A0184 hypothetical protein; hypothetical protein 3958470 6160912 Lcho_3540 Leptothrix cholodnii SP-6 hypothetical protein YP_001792559.1 3957544 R 395495 CDS YP_001792560.1 171060211 6160913 complement(3958481..3959077) 1 NC_010524.1 KEGG: ajs:Ajs_3843 hypothetical protein; hypothetical protein 3959077 6160913 Lcho_3541 Leptothrix cholodnii SP-6 hypothetical protein YP_001792560.1 3958481 R 395495 CDS YP_001792561.1 171060212 6160914 complement(3959226..3960167) 1 NC_010524.1 TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: mpt:Mpe_A3171 RNA polymerase sigma-32 factor; RNA polymerase sigma-32 subunit RpoH 3960167 6160914 Lcho_3542 Leptothrix cholodnii SP-6 RNA polymerase sigma-32 subunit RpoH YP_001792561.1 3959226 R 395495 CDS YP_001792562.1 171060213 6160915 3960444..3965255 1 NC_010524.1 KEGG: cvi:CV_3503 probable sensor/response regulator hybrid; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 3965255 6160915 Lcho_3543 Leptothrix cholodnii SP-6 multi-sensor hybrid histidine kinase YP_001792562.1 3960444 D 395495 CDS YP_001792563.1 171060214 6160916 3965252..3966220 1 NC_010524.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: ppd:Ppro_1341 response regulator receiver modulated diguanylate cyclase; response regulator receiver modulated diguanylate cyclase 3966220 6160916 Lcho_3544 Leptothrix cholodnii SP-6 response regulator receiver modulated diguanylate cyclase YP_001792563.1 3965252 D 395495 CDS YP_001792564.1 171060215 6160936 complement(3966245..3968056) 1 NC_010524.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: cau:Caur_3534 diguanylate cyclase; diguanylate cyclase/phosphodiesterase 3968056 6160936 Lcho_3545 Leptothrix cholodnii SP-6 diguanylate cyclase/phosphodiesterase YP_001792564.1 3966245 R 395495 CDS YP_001792565.1 171060216 6160937 complement(3968084..3969400) 1 NC_010524.1 KEGG: dvl:Dvul_0309 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 3969400 6160937 Lcho_3546 Leptothrix cholodnii SP-6 PAS/PAC sensor-containing diguanylate cyclase YP_001792565.1 3968084 R 395495 CDS YP_001792566.1 171060217 6160938 complement(3969410..3969802) 1 NC_010524.1 KEGG: sru:SRU_2224 photoactive yellow protein; photoactive yellow protein 3969802 6160938 Lcho_3547 Leptothrix cholodnii SP-6 photoactive yellow protein YP_001792566.1 3969410 R 395495 CDS YP_001792567.1 171060218 6160939 complement(3969887..3970849) 1 NC_010524.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rfr:Rfer_0496 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 3970849 6160939 Lcho_3548 Leptothrix cholodnii SP-6 cation diffusion facilitator family transporter YP_001792567.1 3969887 R 395495 CDS YP_001792568.1 171060219 6160940 complement(3970962..3971324) 1 NC_010524.1 PFAM: translation initiation factor SUI1; KEGG: rfr:Rfer_1757 translation initiation factor SUI1; translation initiation factor SUI1 3971324 6160940 Lcho_3549 Leptothrix cholodnii SP-6 translation initiation factor SUI1 YP_001792568.1 3970962 R 395495 CDS YP_001792569.1 171060220 6160941 complement(3971450..3972286) 1 NC_010524.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: tbd:Tbd_2789 probable thiol:disulfide interchange protein; redoxin domain-containing protein 3972286 6160941 Lcho_3550 Leptothrix cholodnii SP-6 redoxin domain-containing protein YP_001792569.1 3971450 R 395495 CDS YP_001792570.1 171060221 6160942 complement(3972349..3973017) 1 NC_010524.1 KEGG: mms:mma_0454 hypothetical protein; hypothetical protein 3973017 6160942 Lcho_3551 Leptothrix cholodnii SP-6 hypothetical protein YP_001792570.1 3972349 R 395495 CDS YP_001792571.1 171060222 6161191 complement(3973120..3973731) 1 NC_010524.1 KEGG: ajs:Ajs_0145 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit 3973731 6161191 Lcho_3552 Leptothrix cholodnii SP-6 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_001792571.1 3973120 R 395495 CDS YP_001792572.1 171060223 6161192 3974001..3975326 1 NC_010524.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_0146 sigma54 specific transcriptional regulator, fis family; putative sigma-54 specific transcriptional regulator 3975326 6161192 Lcho_3553 Leptothrix cholodnii SP-6 putative sigma-54 specific transcriptional regulator YP_001792572.1 3974001 D 395495 CDS YP_001792573.1 171060224 6161193 3975365..3975766 1 NC_010524.1 PFAM: Invasion gene expression up-regulator SirB; KEGG: pol:Bpro_4728 invasion gene expression up-regulator, SirB; invasion gene expression up-regulator SirB 3975766 6161193 Lcho_3554 Leptothrix cholodnii SP-6 invasion gene expression up-regulator SirB YP_001792573.1 3975365 D 395495 CDS YP_001792574.1 171060225 6161194 3975814..3976296 1 NC_010524.1 SMART: Water Stress and Hypersensitive response domain protein; KEGG: bte:BTH_I2944 hypothetical protein; water stress/hypersensitive response domain-containing protein 3976296 6161194 Lcho_3555 Leptothrix cholodnii SP-6 water stress/hypersensitive response domain-containing protein YP_001792574.1 3975814 D 395495 CDS YP_001792575.1 171060226 6161195 complement(3976318..3976890) 1 NC_010524.1 KEGG: vei:Veis_3393 hypothetical protein; hypothetical protein 3976890 6161195 Lcho_3556 Leptothrix cholodnii SP-6 hypothetical protein YP_001792575.1 3976318 R 395495 CDS YP_001792576.1 171060227 6161196 complement(3976926..3978203) 1 NC_010524.1 PFAM: protein of unknown function DUF214; KEGG: mpt:Mpe_A1825 hypothetical protein; hypothetical protein 3978203 6161196 Lcho_3557 Leptothrix cholodnii SP-6 hypothetical protein YP_001792576.1 3976926 R 395495 CDS YP_001792577.1 171060228 6161197 complement(3978200..3978931) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A1826 putative ATP-binding component of ABC transporter; ABC transporter-like protein 3978931 6161197 Lcho_3558 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792577.1 3978200 R 395495 CDS YP_001792578.1 171060229 6161053 complement(3978919..3979485) 1 NC_010524.1 KEGG: vei:Veis_3396 ABC-type metal ion transport system, periplasmic component/surface adhesin; ABC-type metal ion transport system, periplasmic component/surface adhesin 3979485 6161053 Lcho_3559 Leptothrix cholodnii SP-6 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_001792578.1 3978919 R 395495 CDS YP_001792579.1 171060230 6161054 complement(3979563..3980486) 1 NC_010524.1 PFAM: periplasmic solute binding protein; KEGG: mex:Mext_2875 periplasmic solute binding protein; periplasmic solute-binding protein 3980486 6161054 Lcho_3560 Leptothrix cholodnii SP-6 periplasmic solute-binding protein YP_001792579.1 3979563 R 395495 CDS YP_001792580.1 171060231 6161055 complement(3980486..3981373) 1 NC_010524.1 PFAM: ABC-3 protein; KEGG: cvi:CV_3065 high-affinity zinc transport system permease protein; ABC-3 protein 3981373 6161055 Lcho_3561 Leptothrix cholodnii SP-6 ABC-3 protein YP_001792580.1 3980486 R 395495 CDS YP_001792581.1 171060232 6161056 complement(3981420..3982154) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpe:BP3082 putative transport protein ATP-binding; ABC transporter-like protein 3982154 6161056 Lcho_3562 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792581.1 3981420 R 395495 CDS YP_001792582.1 171060233 6161057 complement(3982151..3982246) 1 NC_010524.1 hypothetical protein 3982246 6161057 Lcho_3563 Leptothrix cholodnii SP-6 hypothetical protein YP_001792582.1 3982151 R 395495 CDS YP_001792583.1 171060234 6161058 complement(3982243..3982656) 1 NC_010524.1 PFAM: ferric-uptake regulator; KEGG: dac:Daci_4458 ferric uptake regulator, Fur family; ferric uptake regulator family protein 3982656 6161058 Lcho_3564 Leptothrix cholodnii SP-6 ferric uptake regulator family protein YP_001792583.1 3982243 R 395495 CDS YP_001792584.1 171060235 6161059 complement(3982839..3983516) 1 NC_010524.1 PFAM: 17 kDa surface antigen; KEGG: mpt:Mpe_A0169 hypothetical protein; 17 kDa surface antigen 3983516 6161059 Lcho_3565 Leptothrix cholodnii SP-6 17 kDa surface antigen YP_001792584.1 3982839 R 395495 CDS YP_001792585.1 171060236 6160996 3983828..3984223 1 NC_010524.1 PFAM: histone family protein DNA-binding protein; KEGG: pol:Bpro_1551 histone-like DNA-binding protein; histone family protein DNA-binding protein 3984223 6160996 Lcho_3566 Leptothrix cholodnii SP-6 histone family protein DNA-binding protein YP_001792585.1 3983828 D 395495 CDS YP_001792586.1 171060237 6160997 complement(3984267..3985262) 1 NC_010524.1 KEGG: gvi:gll1989 unknown protein; hypothetical protein 3985262 6160997 Lcho_3567 Leptothrix cholodnii SP-6 hypothetical protein YP_001792586.1 3984267 R 395495 CDS YP_001792587.1 171060238 6160998 complement(3985333..3987381) 1 NC_010524.1 catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA; bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase 3987381 6160998 Lcho_3568 Leptothrix cholodnii SP-6 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase YP_001792587.1 3985333 R 395495 CDS YP_001792588.1 171060239 6160999 complement(3987413..3988501) 1 NC_010524.1 TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mpt:Mpe_A0991 putative ring-hydroxylation complex protein 4; phenylacetate-CoA oxygenase/reductase subunit PaaK 3988501 6160999 Lcho_3569 Leptothrix cholodnii SP-6 phenylacetate-CoA oxygenase/reductase subunit PaaK YP_001792588.1 3987413 R 395495 CDS YP_001792589.1 171060240 6161000 complement(3988498..3988614) 1 NC_010524.1 hypothetical protein 3988614 6161000 Lcho_3570 Leptothrix cholodnii SP-6 hypothetical protein YP_001792589.1 3988498 R 395495 CDS YP_001792590.1 171060241 6161001 complement(3988623..3989174) 1 NC_010524.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: dac:Daci_0813 phenylacetate-CoA oxygenase, PaaJ subunit; phenylacetate-CoA oxygenase subunit PaaJ 3989174 6161001 Lcho_3571 Leptothrix cholodnii SP-6 phenylacetate-CoA oxygenase subunit PaaJ YP_001792590.1 3988623 R 395495 CDS YP_001792591.1 171060242 6161002 complement(3989171..3989962) 1 NC_010524.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: dac:Daci_0812 phenylacetate-CoA oxygenase, PaaI subunit; phenylacetate-CoA oxygenase subunit PaaI 3989962 6161002 Lcho_3572 Leptothrix cholodnii SP-6 phenylacetate-CoA oxygenase subunit PaaI YP_001792591.1 3989171 R 395495 CDS YP_001792592.1 171060243 6163143 complement(3989971..3990273) 1 NC_010524.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB 3990273 paaB 6163143 paaB Leptothrix cholodnii SP-6 phenylacetate-CoA oxygenase subunit PaaB YP_001792592.1 3989971 R 395495 CDS YP_001792593.1 171060244 6163144 complement(3990298..3991326) 1 NC_010524.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA 3991326 paaA 6163144 paaA Leptothrix cholodnii SP-6 phenylacetate-CoA oxygenase subunit PaaA YP_001792593.1 3990298 R 395495 CDS YP_001792594.1 171060245 6163145 3991486..3992493 1 NC_010524.1 PFAM: basic membrane lipoprotein; KEGG: vei:Veis_4425 basic membrane lipoprotein; basic membrane lipoprotein 3992493 6163145 Lcho_3575 Leptothrix cholodnii SP-6 basic membrane lipoprotein YP_001792594.1 3991486 D 395495 CDS YP_001792595.1 171060246 6163146 3992516..3994168 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_4427 ABC transporter related; ABC transporter-like protein 3994168 6163146 Lcho_3576 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792595.1 3992516 D 395495 CDS YP_001792596.1 171060247 6163147 3994179..3995261 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_4428 inner-membrane translocator; inner-membrane translocator 3995261 6163147 Lcho_3577 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001792596.1 3994179 D 395495 CDS YP_001792597.1 171060248 6163148 3995258..3996181 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_4429 inner-membrane translocator; inner-membrane translocator 3996181 6163148 Lcho_3578 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001792597.1 3995258 D 395495 CDS YP_001792598.1 171060249 6163149 3996217..3997113 1 NC_010524.1 KEGG: mpt:Mpe_A2078 hypothetical protein; hypothetical protein 3997113 6163149 Lcho_3579 Leptothrix cholodnii SP-6 hypothetical protein YP_001792598.1 3996217 D 395495 CDS YP_001792599.1 171060250 6162866 3997124..3997918 1 NC_010524.1 PFAM: molybdopterin binding domain; KEGG: mpt:Mpe_A2077 hypothetical protein; molybdopterin-binding domain-containing protein 3997918 6162866 Lcho_3580 Leptothrix cholodnii SP-6 molybdopterin-binding domain-containing protein YP_001792599.1 3997124 D 395495 CDS YP_001792600.1 171060251 6162867 3998123..3999538 1 NC_010524.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: mpt:Mpe_A2076 glutamate--ammonia ligase; glutamine synthetase 3999538 6162867 Lcho_3581 Leptothrix cholodnii SP-6 glutamine synthetase YP_001792600.1 3998123 D 395495 CDS YP_001792601.1 171060252 6162868 3999715..4000206 1 NC_010524.1 KEGG: mpt:Mpe_A2075 conserved hypothetical signal peptide protein; putative signal peptide protein 4000206 6162868 Lcho_3582 Leptothrix cholodnii SP-6 putative signal peptide protein YP_001792601.1 3999715 D 395495 CDS YP_001792602.1 171060253 6162869 4000203..4001276 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: mpt:Mpe_A2074 putative nitrogen regulation protein NR(II); signal transduction histidine kinase, nitrogen specific, NtrB 4001276 6162869 Lcho_3583 Leptothrix cholodnii SP-6 signal transduction histidine kinase, nitrogen specific, NtrB YP_001792602.1 4000203 D 395495 CDS YP_001792603.1 171060254 6162870 4001330..4002814 1 NC_010524.1 KEGG: mpt:Mpe_A2073 putative nitrogen assimilation regulatory response regulator transcription regulator protein; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; nitrogen metabolism transcriptional regulator NtrC 4002814 6162870 Lcho_3584 Leptothrix cholodnii SP-6 nitrogen metabolism transcriptional regulator NtrC YP_001792603.1 4001330 D 395495 CDS YP_001792604.1 171060255 6162871 4003108..4003755 1 NC_010524.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: ajs:Ajs_3105 putative transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 4003755 6162871 Lcho_3585 Leptothrix cholodnii SP-6 Crp/FNR family transcriptional regulator YP_001792604.1 4003108 D 395495 CDS YP_001792605.1 171060256 6162872 complement(4003802..4004689) 1 NC_010524.1 PFAM: dienelactone hydrolase; KEGG: mpt:Mpe_A3005 carboxymethylenebutenolidase; carboxymethylenebutenolidase 4004689 6162872 Lcho_3586 Leptothrix cholodnii SP-6 carboxymethylenebutenolidase YP_001792605.1 4003802 R 395495 CDS YP_001792606.1 171060257 6162757 complement(4004689..4004790) 1 NC_010524.1 hypothetical protein 4004790 6162757 Lcho_3587 Leptothrix cholodnii SP-6 hypothetical protein YP_001792606.1 4004689 R 395495 CDS YP_001792607.1 171060258 6162758 complement(4004851..4005555) 1 NC_010524.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dar:Daro_0224 response regulator receiver:transcriptional regulatory protein, C-terminal; two component transcriptional regulator 4005555 6162758 Lcho_3588 Leptothrix cholodnii SP-6 two component transcriptional regulator YP_001792607.1 4004851 R 395495 CDS YP_001792608.1 171060259 6162759 complement(4005563..4007521) 1 NC_010524.1 KEGG: pna:Pnap_3281 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase 4007521 6162759 Lcho_3589 Leptothrix cholodnii SP-6 PAS/PAC sensor hybrid histidine kinase YP_001792608.1 4005563 R 395495 CDS YP_001792609.1 171060260 6162760 4007704..4009347 1 NC_010524.1 PFAM: AMP-dependent synthetase and ligase; KEGG: pna:Pnap_3282 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 4009347 6162760 Lcho_3590 Leptothrix cholodnii SP-6 AMP-dependent synthetase and ligase YP_001792609.1 4007704 D 395495 CDS YP_001792610.1 171060261 6162761 4009358..4010110 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rme:Rmet_3520 ABC transporter-related protein; ABC transporter-like protein 4010110 6162761 Lcho_3591 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792610.1 4009358 D 395495 CDS YP_001792611.1 171060262 6162762 4010107..4010826 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo0118 ABC transporter ATP-binding protein; ABC transporter-like protein 4010826 6162762 Lcho_3592 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792611.1 4010107 D 395495 CDS YP_001792612.1 171060263 6162763 4010876..4012087 1 NC_010524.1 KEGG: azo:azo0119 probable ABC transporter substrate binding protein; putative ABC transporter substrate-binding protein 4012087 6162763 Lcho_3593 Leptothrix cholodnii SP-6 putative ABC transporter substrate-binding protein YP_001792612.1 4010876 D 395495 CDS YP_001792613.1 171060264 6162587 4012103..4012987 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: eba:ebA3426 probable transmembrane ABC transporter protein; inner-membrane translocator 4012987 6162587 Lcho_3594 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001792613.1 4012103 D 395495 CDS YP_001792614.1 171060265 6162588 4013001..4013936 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: azo:azo0121 putative branched-chain amino acid transport permease; inner-membrane translocator 4013936 6162588 Lcho_3595 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001792614.1 4013001 D 395495 CDS YP_001792615.1 171060266 6162589 4013971..4015752 1 NC_010524.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: azo:azo1702 probable acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4015752 6162589 Lcho_3596 Leptothrix cholodnii SP-6 acyl-CoA dehydrogenase domain-containing protein YP_001792615.1 4013971 D 395495 CDS YP_001792616.1 171060267 6162590 4015769..4016245 1 NC_010524.1 PFAM: MaoC domain protein dehydratase; KEGG: pna:Pnap_3284 MaoC domain protein dehydratase; dehydratase 4016245 6162590 Lcho_3597 Leptothrix cholodnii SP-6 dehydratase YP_001792616.1 4015769 D 395495 CDS YP_001792617.1 171060268 6162591 4016262..4017011 1 NC_010524.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dac:Daci_2390 electron transfer flavoprotein alpha/beta-subunit; electron transfer flavoprotein alpha/beta-subunit 4017011 6162591 Lcho_3598 Leptothrix cholodnii SP-6 electron transfer flavoprotein alpha/beta-subunit YP_001792617.1 4016262 D 395495 CDS YP_001792618.1 171060269 6162592 4017014..4017940 1 NC_010524.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: mpt:Mpe_A1297 electron transfer flavoprotein alpha-subunit; electron transfer flavoprotein subunit alpha 4017940 6162592 Lcho_3599 Leptothrix cholodnii SP-6 electron transfer flavoprotein subunit alpha YP_001792618.1 4017014 D 395495 CDS YP_001792619.1 171060270 6162593 4018249..4019793 1 NC_010524.1 PFAM: Ppx/GppA phosphatase; KEGG: mpt:Mpe_A3006 exopolyphosphatase; Ppx/GppA phosphatase 4019793 6162593 Lcho_3600 Leptothrix cholodnii SP-6 Ppx/GppA phosphatase YP_001792619.1 4018249 D 395495 CDS YP_001792620.1 171060271 6161835 4019842..4021902 1 NC_010524.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 4021902 6161835 Lcho_3601 Leptothrix cholodnii SP-6 polyphosphate kinase YP_001792620.1 4019842 D 395495 CDS YP_001792621.1 171060272 6161836 4021969..4022556 1 NC_010524.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sus:Acid_4132 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4022556 6161836 Lcho_3602 Leptothrix cholodnii SP-6 N-acetyltransferase GCN5 YP_001792621.1 4021969 D 395495 CDS YP_001792622.1 171060273 6161837 complement(4022493..4023680) 1 NC_010524.1 KEGG: eba:ebA5591 hypothetical protein; hypothetical protein 4023680 6161837 Lcho_3603 Leptothrix cholodnii SP-6 hypothetical protein YP_001792622.1 4022493 R 395495 CDS YP_001792623.1 171060274 6161838 complement(4023724..4024596) 1 NC_010524.1 TIGRFAM: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related; KEGG: bja:bll6631 probable phosphatidylserine decarboxylase proenzyme; phosphatidylserine decarboxylase 4024596 6161838 Lcho_3604 Leptothrix cholodnii SP-6 phosphatidylserine decarboxylase YP_001792623.1 4023724 R 395495 CDS YP_001792624.1 171060275 6161839 4024661..4026310 1 NC_010524.1 PFAM: aminotransferase class-III; KEGG: bbt:BBta_6209 putative glutamate-1-semialdehyde 2,1-aminomutase (GSA) (glutamate-1-semialdehyde aminotransferase); class III aminotransferase 4026310 6161839 Lcho_3605 Leptothrix cholodnii SP-6 class III aminotransferase YP_001792624.1 4024661 D 395495 CDS YP_001792625.1 171060276 6161840 complement(4026315..4026923) 1 NC_010524.1 KEGG: bbt:BBta_6210 putative membrane protein of unknown function; hypothetical protein 4026923 6161840 Lcho_3606 Leptothrix cholodnii SP-6 hypothetical protein YP_001792625.1 4026315 R 395495 CDS YP_001792626.1 171060277 6161841 4027092..4028333 1 NC_010524.1 PFAM: glycosyl transferase group 1; KEGG: azo:azo0856 glycosyltransferase; group 1 glycosyl transferase 4028333 6161841 Lcho_3607 Leptothrix cholodnii SP-6 group 1 glycosyl transferase YP_001792626.1 4027092 D 395495 CDS YP_001792627.1 171060278 6161769 complement(4028299..4029567) 1 NC_010524.1 PFAM: major facilitator superfamily MFS_1; KEGG: mpt:Mpe_A1454 hypothetical protein; lysophospholipid transporter LplT 4029567 6161769 Lcho_3608 Leptothrix cholodnii SP-6 lysophospholipid transporter LplT YP_001792627.1 4028299 R 395495 CDS YP_001792628.1 171060279 6161770 complement(4029673..4031421) 1 NC_010524.1 KEGG: pna:Pnap_1209 alkaline phosphatase; alkaline phosphatase 4031421 6161770 Lcho_3609 Leptothrix cholodnii SP-6 alkaline phosphatase YP_001792628.1 4029673 R 395495 CDS YP_001792629.1 171060280 6161771 4031614..4033110 1 NC_010524.1 PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: aci:ACIAD1197 hypothetical protein; adenylate cyclase 4033110 6161771 Lcho_3610 Leptothrix cholodnii SP-6 adenylate cyclase YP_001792629.1 4031614 D 395495 CDS YP_001792630.1 171060281 6161772 complement(4033139..4035025) 1 NC_010524.1 PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dar:Daro_3576 TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP C4-dicarboxylate transport system permease DctM 4035025 6161772 Lcho_3611 Leptothrix cholodnii SP-6 TRAP C4-dicarboxylate transport system permease DctM YP_001792630.1 4033139 R 395495 CDS YP_001792631.1 171060282 6161773 complement(4035022..4036041) 1 NC_010524.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dar:Daro_3577 TRAP dicarboxylate transporter-DctP subunit; TRAP C4-dicarboxylate transport system permease subunit DctP 4036041 6161773 Lcho_3612 Leptothrix cholodnii SP-6 TRAP C4-dicarboxylate transport system permease subunit DctP YP_001792631.1 4035022 R 395495 CDS YP_001792632.1 171060283 6161774 complement(4036077..4037018) 1 NC_010524.1 KEGG: dar:Daro_3578 hypothetical protein; hypothetical protein 4037018 6161774 Lcho_3613 Leptothrix cholodnii SP-6 hypothetical protein YP_001792632.1 4036077 R 395495 CDS YP_001792633.1 171060284 6161775 4037141..4037371 1 NC_010524.1 PFAM: SirA family protein; KEGG: ajs:Ajs_2898 SirA family protein; SirA family protein 4037371 6161775 Lcho_3614 Leptothrix cholodnii SP-6 SirA family protein YP_001792633.1 4037141 D 395495 CDS YP_001792634.1 171060285 6163294 complement(4037346..4037633) 1 NC_010524.1 hypothetical protein 4037633 6163294 Lcho_3615 Leptothrix cholodnii SP-6 hypothetical protein YP_001792634.1 4037346 R 395495 CDS YP_001792635.1 171060286 6163295 complement(4037742..4039322) 1 NC_010524.1 PFAM: Ppx/GppA phosphatase; KEGG: mpt:Mpe_A3006 exopolyphosphatase; Ppx/GppA phosphatase 4039322 6163295 Lcho_3616 Leptothrix cholodnii SP-6 Ppx/GppA phosphatase YP_001792635.1 4037742 R 395495 CDS YP_001792636.1 171060287 6163296 complement(4039489..4040094) 1 NC_010524.1 KEGG: pna:Pnap_2210 hypothetical protein; hypothetical protein 4040094 6163296 Lcho_3617 Leptothrix cholodnii SP-6 hypothetical protein YP_001792636.1 4039489 R 395495 CDS YP_001792637.1 171060288 6163297 complement(4040134..4041222) 1 NC_010524.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: mms:mma_2655 cation transporter (MIT family); Mg2 transporter protein CorA family protein 4041222 6163297 Lcho_3618 Leptothrix cholodnii SP-6 Mg2 transporter protein CorA family protein YP_001792637.1 4040134 R 395495 CDS YP_001792638.1 171060289 6163298 4041369..4042301 1 NC_010524.1 PFAM: metallophosphoesterase; KEGG: ajs:Ajs_1203 metallophosphoesterase; metallophosphoesterase 4042301 6163298 Lcho_3619 Leptothrix cholodnii SP-6 metallophosphoesterase YP_001792638.1 4041369 D 395495 CDS YP_001792639.1 171060290 6163299 4042381..4043316 1 NC_010524.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: azo:azo2159 conservd hypothetical membrane protein; PA-phosphatase-like phosphoesterase 4043316 6163299 Lcho_3620 Leptothrix cholodnii SP-6 PA-phosphatase-like phosphoesterase YP_001792639.1 4042381 D 395495 CDS YP_001792640.1 171060291 6163300 4043316..4044314 1 NC_010524.1 KEGG: afw:Anae109_4197 hypothetical protein; hypothetical protein 4044314 6163300 Lcho_3621 Leptothrix cholodnii SP-6 hypothetical protein YP_001792640.1 4043316 D 395495 CDS YP_001792641.1 171060292 6163258 4044311..4045507 1 NC_010524.1 PFAM: glycosyl transferase family 2; KEGG: afw:Anae109_4198 glycosyl transferase family 2; glycosyl transferase family protein 4045507 6163258 Lcho_3622 Leptothrix cholodnii SP-6 glycosyl transferase family protein YP_001792641.1 4044311 D 395495 CDS YP_001792642.1 171060293 6163259 4045504..4047315 1 NC_010524.1 PFAM: glycosyl transferase family 39; KEGG: azo:azo2162 conserved hypothetical protein, similar to glycosyltransferases; glycosyl transferase family protein 4047315 6163259 Lcho_3623 Leptothrix cholodnii SP-6 glycosyl transferase family protein YP_001792642.1 4045504 D 395495 CDS YP_001792643.1 171060294 6163260 4047312..4049075 1 NC_010524.1 KEGG: azo:azo2314 glycosyltransferase; glycosyltransferase 4049075 6163260 Lcho_3624 Leptothrix cholodnii SP-6 glycosyltransferase YP_001792643.1 4047312 D 395495 CDS YP_001792644.1 171060295 6163261 4049072..4049860 1 NC_010524.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: azo:azo2163 hypothetical protein; PA-phosphatase-like phosphoesterase 4049860 6163261 Lcho_3625 Leptothrix cholodnii SP-6 PA-phosphatase-like phosphoesterase YP_001792644.1 4049072 D 395495 CDS YP_001792645.1 171060296 6163262 complement(4049836..4050702) 1 NC_010524.1 KEGG: mpt:Mpe_A1135 UTP--glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase 4050702 6163262 Lcho_3626 Leptothrix cholodnii SP-6 UTP-glucose-1-phosphate uridylyltransferase YP_001792645.1 4049836 R 395495 CDS YP_001792646.1 171060297 6163263 4050847..4051875 1 NC_010524.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mpt:Mpe_A1136 phosphoglycerate dehydrogenase-related protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic subunit 4051875 6163263 Lcho_3627 Leptothrix cholodnii SP-6 D-isomer specific 2-hydroxyacid dehydrogenase catalytic subunit YP_001792646.1 4050847 D 395495 CDS YP_001792647.1 171060298 6163225 complement(4051841..4054702) 1 NC_010524.1 TIGRFAM: valyl-tRNA synthetase; KEGG: mpt:Mpe_A1137 putative valyl-tRNA synthetase; valyl-tRNA synthetase 4054702 6163225 Lcho_3628 Leptothrix cholodnii SP-6 valyl-tRNA synthetase YP_001792647.1 4051841 R 395495 CDS YP_001792648.1 171060299 6163226 4054919..4055767 1 NC_010524.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 4055767 6163226 Lcho_3629 Leptothrix cholodnii SP-6 3-hydroxybutyryl-CoA dehydrogenase YP_001792648.1 4054919 D 395495 CDS YP_001792649.1 171060300 6163227 4055809..4056819 1 NC_010524.1 PFAM: diacylglycerol kinase catalytic region; KEGG: tth:TTC1957 protein BmrU; diacylglycerol kinase catalytic subunit 4056819 6163227 Lcho_3630 Leptothrix cholodnii SP-6 diacylglycerol kinase catalytic subunit YP_001792649.1 4055809 D 395495 CDS YP_001792650.1 171060301 6163228 4056851..4057771 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpd:RPD_0989 LysR, substrate-binding; LysR family transcriptional regulator 4057771 6163228 Lcho_3631 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001792650.1 4056851 D 395495 CDS YP_001792651.1 171060302 6163229 4057852..4058880 1 NC_010524.1 PFAM: amidohydrolase 2; KEGG: dac:Daci_4449 amidohydrolase 2; amidohydrolase 2 4058880 6163229 Lcho_3632 Leptothrix cholodnii SP-6 amidohydrolase 2 YP_001792651.1 4057852 D 395495 CDS YP_001792652.1 171060303 6163230 4058883..4059578 1 NC_010524.1 TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase; KEGG: pna:Pnap_2031 dimethylmenaquinone methyltransferase; hypothetical protein 4059578 6163230 Lcho_3633 Leptothrix cholodnii SP-6 hypothetical protein YP_001792652.1 4058883 D 395495 CDS YP_001792653.1 171060304 6163231 4059589..4060530 1 NC_010524.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; Phosphogluconate dehydrogenase, NAD-binding, putative-like; KEGG: rfr:Rfer_0336 6-phosphogluconate dehydrogenase, NAD-binding; phosphogluconate dehydrogenase 4060530 6163231 Lcho_3634 Leptothrix cholodnii SP-6 phosphogluconate dehydrogenase YP_001792653.1 4059589 D 395495 CDS YP_001792654.1 171060305 6163170 4060534..4061478 1 NC_010524.1 PFAM: amidohydrolase 2; KEGG: pna:Pnap_2029 amidohydrolase 2; amidohydrolase 2 4061478 6163170 Lcho_3635 Leptothrix cholodnii SP-6 amidohydrolase 2 YP_001792654.1 4060534 D 395495 CDS YP_001792655.1 171060306 6163171 4061836..4062276 1 NC_010524.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase subunit alpha 4062276 6163171 Lcho_3636 Leptothrix cholodnii SP-6 protocatechuate 4,5-dioxygenase subunit alpha YP_001792655.1 4061836 D 395495 CDS YP_001792656.1 171060307 6163172 4062278..4063135 1 NC_010524.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase subunit beta 4063135 6163172 Lcho_3637 Leptothrix cholodnii SP-6 protocatechuate 4,5-dioxygenase subunit beta YP_001792656.1 4062278 D 395495 CDS YP_001792657.1 171060308 6163173 4063147..4064103 1 NC_010524.1 PFAM: oxidoreductase domain protein; KEGG: dac:Daci_4444 oxidoreductase domain protein; oxidoreductase domain-containing protein 4064103 6163173 Lcho_3638 Leptothrix cholodnii SP-6 oxidoreductase domain-containing protein YP_001792657.1 4063147 D 395495 CDS YP_001792658.1 171060309 6163174 4064127..4065077 1 NC_010524.1 PFAM: Auxin Efflux Carrier; KEGG: eba:ebA5059 predicted permease; auxin efflux carrier 4065077 6163174 Lcho_3639 Leptothrix cholodnii SP-6 auxin efflux carrier YP_001792658.1 4064127 D 395495 CDS YP_001792659.1 171060310 6163175 complement(4065113..4066438) 1 NC_010524.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: aav:Aave_3770 protein of unknown function DUF21; hypothetical protein 4066438 6163175 Lcho_3640 Leptothrix cholodnii SP-6 hypothetical protein YP_001792659.1 4065113 R 395495 CDS YP_001792660.1 171060311 6163176 4066580..4068001 1 NC_010524.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: bpt:Bpet0011 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 4068001 6163176 Lcho_3641 Leptothrix cholodnii SP-6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_001792660.1 4066580 D 395495 CDS YP_001792661.1 171060312 6162679 4067967..4069193 1 NC_010524.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 4069193 6162679 Lcho_3642 Leptothrix cholodnii SP-6 8-amino-7-oxononanoate synthase YP_001792661.1 4067967 D 395495 CDS YP_001792662.1 171060313 6162680 4069190..4069900 1 NC_010524.1 TIGRFAM: dethiobiotin synthase; KEGG: pna:Pnap_4031 dethiobiotin synthase; dethiobiotin synthase 4069900 6162680 Lcho_3643 Leptothrix cholodnii SP-6 dethiobiotin synthase YP_001792662.1 4069190 D 395495 CDS YP_001792663.1 171060314 6162681 4069991..4071028 1 NC_010524.1 KEGG: pol:Bpro_1580 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 4071028 6162681 Lcho_3644 Leptothrix cholodnii SP-6 biotin synthase YP_001792663.1 4069991 D 395495 CDS YP_001792664.1 171060315 6162682 4071028..4072317 1 NC_010524.1 PFAM: cytochrome P450; KEGG: pna:Pnap_4029 cytochrome P450; cytochrome P450 4072317 6162682 Lcho_3645 Leptothrix cholodnii SP-6 cytochrome P450 YP_001792664.1 4071028 D 395495 CDS YP_001792665.1 171060316 6162683 complement(4072406..4072720) 1 NC_010524.1 PFAM: small multidrug resistance protein; KEGG: ppu:PP_1701 SugE protein; small multidrug resistance protein 4072720 6162683 Lcho_3646 Leptothrix cholodnii SP-6 small multidrug resistance protein YP_001792665.1 4072406 R 395495 CDS YP_001792666.1 171060317 6162684 complement(4072831..4073832) 1 NC_010524.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ppu:PP_2988 alcohol dehydrogenase, zinc-containing; alcohol dehydrogenase 4073832 6162684 Lcho_3647 Leptothrix cholodnii SP-6 alcohol dehydrogenase YP_001792666.1 4072831 R 395495 CDS YP_001792667.1 171060318 6162685 4074029..4074643 1 NC_010524.1 PFAM: regulatory protein TetR; KEGG: bam:Bamb_4737 transcriptional regulator, TetR family; TetR family transcriptional regulator 4074643 6162685 Lcho_3648 Leptothrix cholodnii SP-6 TetR family transcriptional regulator YP_001792667.1 4074029 D 395495 CDS YP_001792668.1 171060319 6162472 complement(4074711..4075424) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_2954 ABC transporter related; ABC transporter-like protein 4075424 6162472 Lcho_3649 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792668.1 4074711 R 395495 CDS YP_001792669.1 171060320 6162473 complement(4075426..4076274) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_0211 ABC transporter related; ABC transporter-like protein 4076274 6162473 Lcho_3650 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792669.1 4075426 R 395495 CDS YP_001792670.1 171060321 6162474 complement(4076271..4077278) 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: rfr:Rfer_0212 inner-membrane translocator; inner-membrane translocator 4077278 6162474 Lcho_3651 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001792670.1 4076271 R 395495 CDS YP_001792671.1 171060322 6162475 complement(4077359..4078240) 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: pna:Pnap_2951 inner-membrane translocator; inner-membrane translocator 4078240 6162475 Lcho_3652 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001792671.1 4077359 R 395495 CDS YP_001792672.1 171060323 6162476 complement(4078367..4079539) 1 NC_010524.1 PFAM: Extracellular ligand-binding receptor; KEGG: rfr:Rfer_0214 extracellular ligand-binding receptor; extracellular ligand-binding receptor 4079539 6162476 Lcho_3653 Leptothrix cholodnii SP-6 extracellular ligand-binding receptor YP_001792672.1 4078367 R 395495 CDS YP_001792673.1 171060324 6162477 complement(4079536..4080354) 1 NC_010524.1 PFAM: alpha/beta hydrolase fold; KEGG: rfr:Rfer_0215 alpha/beta hydrolase; alpha/beta hydrolase fold protein 4080354 6162477 Lcho_3654 Leptothrix cholodnii SP-6 alpha/beta hydrolase fold protein YP_001792673.1 4079536 R 395495 CDS YP_001792674.1 171060325 6161737 complement(4080351..4081946) 1 NC_010524.1 TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; KEGG: rfr:Rfer_0216 benzoate-CoA ligase family; benzoate-CoA ligase family 4081946 6161737 Lcho_3655 Leptothrix cholodnii SP-6 benzoate-CoA ligase family YP_001792674.1 4080351 R 395495 CDS YP_001792675.1 171060326 6161738 complement(4081980..4083539) 1 NC_010524.1 PFAM: Aldehyde Dehydrogenase_; KEGG: pna:Pnap_2947 aldehyde dehydrogenase; aldehyde dehydrogenase 4083539 6161738 Lcho_3656 Leptothrix cholodnii SP-6 aldehyde dehydrogenase YP_001792675.1 4081980 R 395495 CDS YP_001792676.1 171060327 6161739 complement(4083550..4084014) 1 NC_010524.1 KEGG: reh:H16_B1916 hypothetical protein; hypothetical protein 4084014 6161739 Lcho_3657 Leptothrix cholodnii SP-6 hypothetical protein YP_001792676.1 4083550 R 395495 CDS YP_001792677.1 171060328 6161740 4084114..4085070 1 NC_010524.1 consists of N-terminal helix-turn-helix domain and C-terminal shikimate kinase-like domain which may bind benzoyl-CoA; controls inducible expression of the bzd catabolic operon that is involved in the anaerobic catabolism of benzoate; anaerobic benzoate catabolism transcriptional regulator 4085070 6161740 Lcho_3658 Leptothrix cholodnii SP-6 anaerobic benzoate catabolism transcriptional regulator YP_001792677.1 4084114 D 395495 CDS YP_001792678.1 171060329 6161741 4085185..4086852 1 NC_010524.1 cleaves the ring of 2,3-dihydro-2,3-dihydroxybenzoyl-CoA forming 6-hydroxy-3-hexenoyl-CoA; benzoyl-CoA-dihydrodiol lyase 4086852 6161741 Lcho_3659 Leptothrix cholodnii SP-6 benzoyl-CoA-dihydrodiol lyase YP_001792678.1 4085185 D 395495 CDS YP_001792679.1 171060330 6161742 4086976..4088403 1 NC_010524.1 KEGG: reh:H16_B1913 benzoyl-CoA dioxygenase B; benzoyl-CoA dioxygenase B 4088403 6161742 Lcho_3660 Leptothrix cholodnii SP-6 benzoyl-CoA dioxygenase B YP_001792679.1 4086976 D 395495 CDS YP_001792680.1 171060331 6161743 4088609..4089904 1 NC_010524.1 TIGRFAM: benzoyl-CoA oxygenase/reductase, BoxA protein; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pna:Pnap_2942 oxidoreductase FAD/NAD(P)-binding domain protein; benzoyl-CoA oxygenase/reductase, BoxA protein 4089904 6161743 Lcho_3661 Leptothrix cholodnii SP-6 benzoyl-CoA oxygenase/reductase, BoxA protein YP_001792680.1 4088609 D 395495 CDS YP_001792681.1 171060332 6160312 4090048..4090851 1 NC_010524.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pol:Bpro_1631 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 4090851 6160312 Lcho_3662 Leptothrix cholodnii SP-6 enoyl-CoA hydratase/isomerase YP_001792681.1 4090048 D 395495 CDS YP_001792682.1 171060333 6160313 4090878..4092395 1 NC_010524.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: pna:Pnap_2940 3-hydroxybutyryl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase 4092395 6160313 Lcho_3663 Leptothrix cholodnii SP-6 3-hydroxybutyryl-CoA dehydrogenase YP_001792682.1 4090878 D 395495 CDS YP_001792683.1 171060334 6160314 4092419..4092874 1 NC_010524.1 PFAM: MaoC domain protein dehydratase; KEGG: rfr:Rfer_0225 MaoC-like dehydratase; dehydratase 4092874 6160314 Lcho_3664 Leptothrix cholodnii SP-6 dehydratase YP_001792683.1 4092419 D 395495 CDS YP_001792684.1 171060335 6160315 4092921..4094123 1 NC_010524.1 KEGG: rfr:Rfer_0226 beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; beta-ketoadipyl CoA thiolase 4094123 6160315 Lcho_3665 Leptothrix cholodnii SP-6 beta-ketoadipyl CoA thiolase YP_001792684.1 4092921 D 395495 CDS YP_001792685.1 171060336 6160316 complement(4094185..4098930) 1 NC_010524.1 KEGG: neu:NE0315 possible multicopper oxidase; putative multicopper oxidase 4098930 6160316 Lcho_3666 Leptothrix cholodnii SP-6 putative multicopper oxidase YP_001792685.1 4094185 R 395495 CDS YP_001792686.1 171060337 6160317 4099601..4100947 1 NC_010524.1 KEGG: gsu:GSU1844 IPT/TIG domain protein, putative; IPT/TIG domain-containing protein 4100947 6160317 Lcho_3667 Leptothrix cholodnii SP-6 IPT/TIG domain-containing protein YP_001792686.1 4099601 D 395495 CDS YP_001792687.1 171060338 6160318 4100956..4103466 1 NC_010524.1 PFAM: Fibronectin type III domain protein; KEGG: pen:PSEEN2822 hypothetical protein; fibronectin type III domain-containing protein 4103466 6160318 Lcho_3668 Leptothrix cholodnii SP-6 fibronectin type III domain-containing protein YP_001792687.1 4100956 D 395495 CDS YP_001792688.1 171060339 6160417 4103663..4104865 1 NC_010524.1 catalyzes the formation of catechol from salicylate; salicylate hydroxylase 4104865 6160417 Lcho_3669 Leptothrix cholodnii SP-6 salicylate hydroxylase YP_001792688.1 4103663 D 395495 CDS YP_001792689.1 171060340 6160418 4104862..4105917 1 NC_010524.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: pna:Pnap_3145 cupin 2, conserved barrel domain protein; cupin 4105917 6160418 Lcho_3670 Leptothrix cholodnii SP-6 cupin YP_001792689.1 4104862 D 395495 CDS YP_001792690.1 171060341 6160419 4105970..4106677 1 NC_010524.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pna:Pnap_3146 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 4106677 6160419 Lcho_3671 Leptothrix cholodnii SP-6 fumarylacetoacetate (FAA) hydrolase YP_001792690.1 4105970 D 395495 CDS YP_001792691.1 171060342 6160420 4106682..4107320 1 NC_010524.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: dac:Daci_3700 maleylacetoacetate isomerase; maleylacetoacetate isomerase 4107320 6160420 Lcho_3672 Leptothrix cholodnii SP-6 maleylacetoacetate isomerase YP_001792691.1 4106682 D 395495 CDS YP_001792692.1 171060343 6160421 4107505..4108041 1 NC_010524.1 KEGG: eba:ebA733 hypothetical protein; hypothetical protein 4108041 6160421 Lcho_3673 Leptothrix cholodnii SP-6 hypothetical protein YP_001792692.1 4107505 D 395495 CDS YP_001792693.1 171060344 6160422 4108038..4109369 1 NC_010524.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: eba:ebA732 C4-dicarboxylate uptake permease; TRAP dicarboxylate transporter subunit DctM 4109369 6160422 Lcho_3674 Leptothrix cholodnii SP-6 TRAP dicarboxylate transporter subunit DctM YP_001792693.1 4108038 D 395495 CDS YP_001792694.1 171060345 6160423 4109413..4110447 1 NC_010524.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: eba:ebA729 dicarboxylate transport protein; TRAP C4-dicarboxylate transport system permease subunit DctP 4110447 6160423 Lcho_3675 Leptothrix cholodnii SP-6 TRAP C4-dicarboxylate transport system permease subunit DctP YP_001792694.1 4109413 D 395495 CDS YP_001792695.1 171060346 6160424 4110633..4110857 1 NC_010524.1 KEGG: pna:Pnap_3867 hypothetical protein; hypothetical protein 4110857 6160424 Lcho_3676 Leptothrix cholodnii SP-6 hypothetical protein YP_001792695.1 4110633 D 395495 CDS YP_001792696.1 171060347 6160425 4110868..4111692 1 NC_010524.1 PFAM: protein of unknown function DUF344; KEGG: xac:XAC0941 transcriptional regulator; hypothetical protein 4111692 6160425 Lcho_3677 Leptothrix cholodnii SP-6 hypothetical protein YP_001792696.1 4110868 D 395495 CDS YP_001792697.1 171060348 6160426 complement(4111705..4113432) 1 NC_010524.1 PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: pna:Pnap_1803 ABC transporter domain protein; ABC transporter 4113432 6160426 Lcho_3678 Leptothrix cholodnii SP-6 ABC transporter YP_001792697.1 4111705 R 395495 CDS YP_001792698.1 171060349 6160427 complement(4113496..4113948) 1 NC_010524.1 PFAM: CBS domain containing protein; KEGG: pna:Pnap_1141 putative signal-transduction protein with CBS domains; signal-transduction protein 4113948 6160427 Lcho_3679 Leptothrix cholodnii SP-6 signal-transduction protein YP_001792698.1 4113496 R 395495 CDS YP_001792699.1 171060350 6160428 complement(4114075..4114635) 1 NC_010524.1 PFAM: Phosphoglycerate mutase; KEGG: aha:AHA_2360 phosphoglycerate mutase; phosphoglycerate mutase 4114635 6160428 Lcho_3680 Leptothrix cholodnii SP-6 phosphoglycerate mutase YP_001792699.1 4114075 R 395495 CDS YP_001792700.1 171060351 6160429 4114804..4116981 1 NC_010524.1 KEGG: rca:Rcas_1443 hypothetical protein; hypothetical protein 4116981 6160429 Lcho_3681 Leptothrix cholodnii SP-6 hypothetical protein YP_001792700.1 4114804 D 395495 CDS YP_001792701.1 171060352 6160455 4116981..4118330 1 NC_010524.1 KEGG: afw:Anae109_4000 metallophosphoesterase; hypothetical protein 4118330 6160455 Lcho_3682 Leptothrix cholodnii SP-6 hypothetical protein YP_001792701.1 4116981 D 395495 CDS YP_001792702.1 171060353 6160456 complement(4118349..4120100) 1 NC_010524.1 proposed role in polysaccahride synthesis; putative FAD-binding dehydrogenase 4120100 6160456 Lcho_3683 Leptothrix cholodnii SP-6 putative FAD-binding dehydrogenase YP_001792702.1 4118349 R 395495 CDS YP_001792703.1 171060354 6160457 complement(4120278..4121042) 1 NC_010524.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pna:Pnap_1648 regulatory proteins, IclR; IclR family transcriptional regulator 4121042 6160457 Lcho_3684 Leptothrix cholodnii SP-6 IclR family transcriptional regulator YP_001792703.1 4120278 R 395495 CDS YP_001792704.1 171060355 6160458 4121204..4122097 1 NC_010524.1 PFAM: UBA/THIF-type NAD/FAD binding protein; Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: pol:Bpro_1847 shikimate 5-dehydrogenase; shikimate dehydrogenase 4122097 6160458 Lcho_3685 Leptothrix cholodnii SP-6 shikimate dehydrogenase YP_001792704.1 4121204 D 395495 CDS YP_001792705.1 171060356 6160459 4122164..4123315 1 NC_010524.1 PFAM: Extracellular ligand-binding receptor; KEGG: pna:Pnap_1650 extracellular ligand-binding receptor; extracellular ligand-binding receptor 4123315 6160459 Lcho_3686 Leptothrix cholodnii SP-6 extracellular ligand-binding receptor YP_001792705.1 4122164 D 395495 CDS YP_001792706.1 171060357 6160460 4123413..4124288 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: pol:Bpro_1849 inner-membrane translocator; inner-membrane translocator 4124288 6160460 Lcho_3687 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001792706.1 4123413 D 395495 CDS YP_001792707.1 171060358 6160461 4124310..4125302 1 NC_010524.1 PFAM: inner-membrane translocator; KEGG: pna:Pnap_1652 inner-membrane translocator; inner-membrane translocator 4125302 6160461 Lcho_3688 Leptothrix cholodnii SP-6 inner-membrane translocator YP_001792707.1 4124310 D 395495 CDS YP_001792708.1 171060359 6161087 4125299..4126057 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_1653 ABC transporter related; ABC transporter-like protein 4126057 6161087 Lcho_3689 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792708.1 4125299 D 395495 CDS YP_001792709.1 171060360 6161088 4126059..4126808 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_1852 ABC transporter related; ABC transporter-like protein 4126808 6161088 Lcho_3690 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792709.1 4126059 D 395495 CDS YP_001792710.1 171060361 6161089 4126961..4127848 1 NC_010524.1 KEGG: pol:Bpro_1853 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 4127848 6161089 Lcho_3691 Leptothrix cholodnii SP-6 4-hydroxyphenylpyruvate dioxygenase YP_001792710.1 4126961 D 395495 CDS YP_001792711.1 171060362 6161090 4127862..4128779 1 NC_010524.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pna:Pnap_1656 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 4128779 6161090 Lcho_3692 Leptothrix cholodnii SP-6 xylose isomerase domain-containing protein YP_001792711.1 4127862 D 395495 CDS YP_001792712.1 171060363 6161091 4128857..4129168 1 NC_010524.1 KEGG: dac:Daci_4212 hypothetical protein; hypothetical protein 4129168 6161091 Lcho_3693 Leptothrix cholodnii SP-6 hypothetical protein YP_001792712.1 4128857 D 395495 CDS YP_001792713.1 171060364 6161092 4129236..4130495 1 NC_010524.1 PFAM: nucleoside recognition domain protein; KEGG: dar:Daro_3256 nucleoside recognition; nucleoside recognition domain-containing protein 4130495 6161092 Lcho_3694 Leptothrix cholodnii SP-6 nucleoside recognition domain-containing protein YP_001792713.1 4129236 D 395495 CDS YP_001792714.1 171060365 6161093 4130559..4131557 1 NC_010524.1 PFAM: aldo/keto reductase; KEGG: azo:azo2535 probable aldo-keto reductase; aldo/keto reductase 4131557 6161093 Lcho_3695 Leptothrix cholodnii SP-6 aldo/keto reductase YP_001792714.1 4130559 D 395495 CDS YP_001792715.1 171060366 6163351 4131671..4132276 1 NC_010524.1 hypothetical protein 4132276 6163351 Lcho_3696 Leptothrix cholodnii SP-6 hypothetical protein YP_001792715.1 4131671 D 395495 CDS YP_001792716.1 171060367 6163352 complement(4132268..4133191) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbt:BBta_2732 putative transcriptional regulatory protein, LysR family; LysR family transcriptional regulator 4133191 6163352 Lcho_3697 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001792716.1 4132268 R 395495 CDS YP_001792717.1 171060368 6163353 4133311..4133673 1 NC_010524.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase subunit alpha 4133673 6163353 Lcho_3698 Leptothrix cholodnii SP-6 protocatechuate 4,5-dioxygenase subunit alpha YP_001792717.1 4133311 D 395495 CDS YP_001792718.1 171060369 6163354 4133678..4134592 1 NC_010524.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase subunit beta 4134592 6163354 Lcho_3699 Leptothrix cholodnii SP-6 protocatechuate 4,5-dioxygenase subunit beta YP_001792718.1 4133678 D 395495 CDS YP_001792719.1 171060370 6163355 4134728..4135804 1 NC_010524.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ppd:Ppro_0900 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 4135804 6163355 Lcho_3700 Leptothrix cholodnii SP-6 endonuclease/exonuclease/phosphatase YP_001792719.1 4134728 D 395495 CDS YP_001792720.1 171060371 6163356 4135851..4137338 1 NC_010524.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 4137338 6163356 Lcho_3701 Leptothrix cholodnii SP-6 AMP nucleosidase YP_001792720.1 4135851 D 395495 CDS YP_001792721.1 171060372 6163357 complement(4137375..4139966) 1 NC_010524.1 KEGG: rfr:Rfer_2262 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein; response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 4139966 6163357 Lcho_3702 Leptothrix cholodnii SP-6 response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001792721.1 4137375 R 395495 CDS YP_001792722.1 171060373 6162803 complement(4139963..4143028) 1 NC_010524.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: rfr:Rfer_2263 periplasmic sensor hybrid histidine kinase; Hpt sensor hybrid histidine kinase 4143028 6162803 Lcho_3703 Leptothrix cholodnii SP-6 Hpt sensor hybrid histidine kinase YP_001792722.1 4139963 R 395495 CDS YP_001792723.1 171060374 6162804 complement(4143025..4143930) 1 NC_010524.1 KEGG: rfr:Rfer_2264 hypothetical protein; hypothetical protein 4143930 6162804 Lcho_3704 Leptothrix cholodnii SP-6 hypothetical protein YP_001792723.1 4143025 R 395495 CDS YP_001792724.1 171060375 6162805 complement(4144068..4144802) 1 NC_010524.1 PFAM: peptidase M48 Ste24p; KEGG: mpt:Mpe_A0578 hypothetical protein; peptidase M48 Ste24p 4144802 6162805 Lcho_3705 Leptothrix cholodnii SP-6 peptidase M48 Ste24p YP_001792724.1 4144068 R 395495 CDS YP_001792725.1 171060376 6162806 4145137..4146633 1 NC_010524.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rfr:Rfer_3184 RND efflux system, outer membrane lipoprotein, NodT; RND efflux system outer membrane lipoprotein 4146633 6162806 Lcho_3706 Leptothrix cholodnii SP-6 RND efflux system outer membrane lipoprotein YP_001792725.1 4145137 D 395495 CDS YP_001792726.1 171060377 6162807 4146630..4147943 1 NC_010524.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pna:Pnap_3548 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 4147943 6162807 Lcho_3707 Leptothrix cholodnii SP-6 RND family efflux transporter MFP subunit YP_001792726.1 4146630 D 395495 CDS YP_001792727.1 171060378 6162808 4147940..4148704 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_2824 ABC transporter related; ABC transporter-like protein 4148704 6162808 Lcho_3708 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792727.1 4147940 D 395495 CDS YP_001792728.1 171060379 6162189 4148704..4149915 1 NC_010524.1 PFAM: protein of unknown function DUF214; KEGG: dar:Daro_3916 protein of unknown function DUF214; hypothetical protein 4149915 6162189 Lcho_3709 Leptothrix cholodnii SP-6 hypothetical protein YP_001792728.1 4148704 D 395495 CDS YP_001792729.1 171060380 6162190 complement(4149979..4150917) 1 NC_010524.1 KEGG: dac:Daci_0052 peptidoglycan-binding domain 1 protein; peptidoglycan-binding domain-containing protein 4150917 6162190 Lcho_3710 Leptothrix cholodnii SP-6 peptidoglycan-binding domain-containing protein YP_001792729.1 4149979 R 395495 CDS YP_001792730.1 171060381 6162191 complement(4151084..4151671) 1 NC_010524.1 SMART: Rhodanese domain protein; KEGG: dar:Daro_1929 rhodanese-like; rhodanese domain-containing protein 4151671 6162191 Lcho_3711 Leptothrix cholodnii SP-6 rhodanese domain-containing protein YP_001792730.1 4151084 R 395495 CDS YP_001792731.1 171060382 6162192 complement(4151784..4153220) 1 NC_010524.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pol:Bpro_2037 RND efflux system, outer membrane lipoprotein, NodT; RND efflux system outer membrane lipoprotein 4153220 6162192 Lcho_3712 Leptothrix cholodnii SP-6 RND efflux system outer membrane lipoprotein YP_001792731.1 4151784 R 395495 CDS YP_001792732.1 171060383 6162193 complement(4153223..4156399) 1 NC_010524.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pna:Pnap_2886 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family protein 4156399 6162193 Lcho_3713 Leptothrix cholodnii SP-6 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001792732.1 4153223 R 395495 CDS YP_001792733.1 171060384 6162194 complement(4156410..4157636) 1 NC_010524.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pol:Bpro_2035 secretion protein HlyD; RND family efflux transporter MFP subunit 4157636 6162194 Lcho_3714 Leptothrix cholodnii SP-6 RND family efflux transporter MFP subunit YP_001792733.1 4156410 R 395495 CDS YP_001792734.1 171060385 6162195 4157850..4158476 1 NC_010524.1 PFAM: regulatory protein TetR; KEGG: rfr:Rfer_2067 transcriptional regulator, TetR family; TetR family transcriptional regulator 4158476 6162195 Lcho_3715 Leptothrix cholodnii SP-6 TetR family transcriptional regulator YP_001792734.1 4157850 D 395495 CDS YP_001792735.1 171060386 6161727 complement(4158493..4158804) 1 NC_010524.1 PFAM: protein of unknown function DUF1232; KEGG: pol:Bpro_2926 hypothetical protein; hypothetical protein 4158804 6161727 Lcho_3716 Leptothrix cholodnii SP-6 hypothetical protein YP_001792735.1 4158493 R 395495 CDS YP_001792736.1 171060387 6161728 4158994..4159440 1 NC_010524.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: rfr:Rfer_2543 hypothetical protein; activator of Hsp90 ATPase 1 family protein 4159440 6161728 Lcho_3717 Leptothrix cholodnii SP-6 activator of Hsp90 ATPase 1 family protein YP_001792736.1 4158994 D 395495 CDS YP_001792737.1 171060388 6161729 4159556..4159885 1 NC_010524.1 KEGG: pol:Bpro_0891 cupin 2, conserved barrel; cupin 4159885 6161729 Lcho_3718 Leptothrix cholodnii SP-6 cupin YP_001792737.1 4159556 D 395495 CDS YP_001792738.1 171060389 6161730 4160015..4162117 1 NC_010524.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 4162117 6161730 Lcho_3719 Leptothrix cholodnii SP-6 elongation factor G YP_001792738.1 4160015 D 395495 CDS YP_001792739.1 171060390 6161731 complement(4162163..4163860) 1 NC_010524.1 KEGG: pna:Pnap_3103 hypothetical protein; hypothetical protein 4163860 6161731 Lcho_3720 Leptothrix cholodnii SP-6 hypothetical protein YP_001792739.1 4162163 R 395495 CDS YP_001792740.1 171060391 6161732 complement(4163882..4164985) 1 NC_010524.1 PFAM: basic membrane lipoprotein; KEGG: rfr:Rfer_3296 basic membrane lipoprotein; basic membrane lipoprotein 4164985 6161732 Lcho_3721 Leptothrix cholodnii SP-6 basic membrane lipoprotein YP_001792740.1 4163882 R 395495 CDS YP_001792741.1 171060392 6161733 complement(4165114..4165377) 1 NC_010524.1 hypothetical protein 4165377 6161733 Lcho_3722 Leptothrix cholodnii SP-6 hypothetical protein YP_001792741.1 4165114 R 395495 CDS YP_001792742.1 171060393 6162532 complement(4165463..4166374) 1 NC_010524.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: mpt:Mpe_A1176 putative FdhD protein; formate dehydrogenase family accessory protein FdhD 4166374 6162532 Lcho_3723 Leptothrix cholodnii SP-6 formate dehydrogenase family accessory protein FdhD YP_001792742.1 4165463 R 395495 CDS YP_001792743.1 171060394 6162533 complement(4166384..4166737) 1 NC_010524.1 KEGG: pol:Bpro_0941 hypothetical protein; hypothetical protein 4166737 6162533 Lcho_3724 Leptothrix cholodnii SP-6 hypothetical protein YP_001792743.1 4166384 R 395495 CDS YP_001792744.1 171060395 6162534 complement(4166764..4167918) 1 NC_010524.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: mpt:Mpe_A1173 formate dehydrogenase subunit C precursor; formate dehydrogenase subunit gamma 4167918 6162534 Lcho_3725 Leptothrix cholodnii SP-6 formate dehydrogenase subunit gamma YP_001792744.1 4166764 R 395495 CDS YP_001792745.1 171060396 6162535 complement(4167944..4168177) 1 NC_010524.1 KEGG: pol:Bpro_0939 putative lipoprotein; putative lipoprotein 4168177 6162535 Lcho_3726 Leptothrix cholodnii SP-6 putative lipoprotein YP_001792745.1 4167944 R 395495 CDS YP_001792746.1 171060397 6162536 complement(4168174..4168818) 1 NC_010524.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mpt:Mpe_A1171 formate dehydrogenase iron-sulfur subunit; 4Fe-4S ferredoxin 4168818 6162536 Lcho_3727 Leptothrix cholodnii SP-6 4Fe-4S ferredoxin YP_001792746.1 4168174 R 395495 CDS YP_001792747.1 171060398 6162537 complement(4168928..4171912) 1 NC_010524.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mpt:Mpe_A1170 formate dehydrogenase large subunit precursor; molybdopterin oxidoreductase 4171912 6162537 Lcho_3728 Leptothrix cholodnii SP-6 molybdopterin oxidoreductase YP_001792747.1 4168928 R 395495 CDS YP_001792748.1 171060399 6162538 complement(4171941..4172180) 1 NC_010524.1 hypothetical protein 4172180 6162538 Lcho_3729 Leptothrix cholodnii SP-6 hypothetical protein YP_001792748.1 4171941 R 395495 CDS YP_001792749.1 171060400 6163763 4172390..4172869 1 NC_010524.1 KEGG: mpt:Mpe_A1164 hypothetical protein; hypothetical protein 4172869 6163763 Lcho_3730 Leptothrix cholodnii SP-6 hypothetical protein YP_001792749.1 4172390 D 395495 CDS YP_001792750.1 171060401 6163764 4172878..4173507 1 NC_010524.1 KEGG: mpt:Mpe_A1165 proline rich protein; proline rich protein 4173507 6163764 Lcho_3731 Leptothrix cholodnii SP-6 proline rich protein YP_001792750.1 4172878 D 395495 CDS YP_001792751.1 171060402 6163765 4173413..4175644 1 NC_010524.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mpt:Mpe_A1166 putative iron-sulfur binding protein; 4Fe-4S ferredoxin 4175644 6163765 Lcho_3732 Leptothrix cholodnii SP-6 4Fe-4S ferredoxin YP_001792751.1 4173413 D 395495 CDS YP_001792752.1 171060403 6163766 4175660..4176304 1 NC_010524.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: mpt:Mpe_A1167 hypothetical protein; cytoplasmic chaperone TorD family protein 4176304 6163766 Lcho_3733 Leptothrix cholodnii SP-6 cytoplasmic chaperone TorD family protein YP_001792752.1 4175660 D 395495 CDS YP_001792753.1 171060404 6163767 4176304..4176903 1 NC_010524.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 4176903 mobA 6163767 mobA Leptothrix cholodnii SP-6 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_001792753.1 4176304 D 395495 CDS YP_001792754.1 171060405 6163768 4176890..4178269 1 NC_010524.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mpt:Mpe_A1169 sigma-54 dependent response regulator; two component sigma-54 specific Fis family transcriptional regulator 4178269 6163768 Lcho_3735 Leptothrix cholodnii SP-6 two component sigma-54 specific Fis family transcriptional regulator YP_001792754.1 4176890 D 395495 CDS YP_001792755.1 171060406 6163821 4178269..4180296 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A1168 sensor histidine kinase; histidine kinase 4180296 6163821 Lcho_3736 Leptothrix cholodnii SP-6 histidine kinase YP_001792755.1 4178269 D 395495 CDS YP_001792756.1 171060407 6163822 4180690..4182180 1 NC_010524.1 PFAM: outer membrane efflux protein; KEGG: azo:azo2554 putative outer membrane efflux protein; outer membrane efflux protein 4182180 6163822 Lcho_3737 Leptothrix cholodnii SP-6 outer membrane efflux protein YP_001792756.1 4180690 D 395495 CDS YP_001792757.1 171060408 6163823 4182230..4183027 1 NC_010524.1 KEGG: azo:azo2555 HlyD family secretion protein; HlyD family secretion protein 4183027 6163823 Lcho_3738 Leptothrix cholodnii SP-6 HlyD family secretion protein YP_001792757.1 4182230 D 395495 CDS YP_001792758.1 171060409 6163824 4183129..4195824 1 NC_010524.1 KEGG: sde:Sde_3233 hypothetical protein; TIGRFAM: outer membrane adhesin like proteiin; PFAM: Cadherin; glycosyl hydrolase BNR repeat-containing protein; Ig family protein; LVIVD repeat protein; SMART: Dystroglycan-type cadherin domain protein; outer membrane adhesin-like protein 4195824 6163824 Lcho_3739 Leptothrix cholodnii SP-6 outer membrane adhesin-like protein YP_001792758.1 4183129 D 395495 CDS YP_001792759.1 171060410 6163825 4195907..4197232 1 NC_010524.1 KEGG: azo:azo2557 HlyD family secretion protein; HlyD family secretion protein 4197232 6163825 Lcho_3740 Leptothrix cholodnii SP-6 HlyD family secretion protein YP_001792759.1 4195907 D 395495 CDS YP_001792760.1 171060411 6163826 4197234..4199396 1 NC_010524.1 KEGG: azo:azo2558 membrane protein with HlyD domain; HlyD domain-containing protein 4199396 6163826 Lcho_3741 Leptothrix cholodnii SP-6 HlyD domain-containing protein YP_001792760.1 4197234 D 395495 CDS YP_001792761.1 171060412 6163827 complement(4199409..4200479) 1 NC_010524.1 KEGG: mpt:Mpe_A0809 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; adenosine deaminase 4200479 6163827 Lcho_3742 Leptothrix cholodnii SP-6 adenosine deaminase YP_001792761.1 4199409 R 395495 CDS YP_001792762.1 171060413 6161212 4200715..4201839 1 NC_010524.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rfr:Rfer_3761 secretion protein HlyD; RND family efflux transporter MFP subunit 4201839 6161212 Lcho_3743 Leptothrix cholodnii SP-6 RND family efflux transporter MFP subunit YP_001792762.1 4200715 D 395495 CDS YP_001792763.1 171060414 6161213 4201861..4205163 1 NC_010524.1 PFAM: acriflavin resistance protein; KEGG: rfr:Rfer_3760 acriflavin resistance protein; acriflavin resistance protein 4205163 6161213 Lcho_3744 Leptothrix cholodnii SP-6 acriflavin resistance protein YP_001792763.1 4201861 D 395495 CDS YP_001792764.1 171060415 6161214 4205185..4205409 1 NC_010524.1 KEGG: rfr:Rfer_3758 hypothetical protein; hypothetical protein 4205409 6161214 Lcho_3745 Leptothrix cholodnii SP-6 hypothetical protein YP_001792764.1 4205185 D 395495 CDS YP_001792765.1 171060416 6161215 4205502..4205792 1 NC_010524.1 PFAM: protein of unknown function DUF156; KEGG: rfr:Rfer_3757 hypothetical protein; hypothetical protein 4205792 6161215 Lcho_3746 Leptothrix cholodnii SP-6 hypothetical protein YP_001792765.1 4205502 D 395495 CDS YP_001792766.1 171060417 6161216 4205843..4206289 1 NC_010524.1 PFAM: OsmC family protein; KEGG: pna:Pnap_2833 OsmC family protein; OsmC family protein 4206289 6161216 Lcho_3747 Leptothrix cholodnii SP-6 OsmC family protein YP_001792766.1 4205843 D 395495 CDS YP_001792767.1 171060418 6161217 complement(4206315..4206671) 1 NC_010524.1 PFAM: regulatory protein ArsR; KEGG: mpt:Mpe_A2424 transcriptional regulator; ArsR family transcriptional regulator 4206671 6161217 Lcho_3748 Leptothrix cholodnii SP-6 ArsR family transcriptional regulator YP_001792767.1 4206315 R 395495 CDS YP_001792768.1 171060419 6161218 complement(4206748..4207104) 1 NC_010524.1 KEGG: mpt:Mpe_A2425 hypothetical protein; hypothetical protein 4207104 6161218 Lcho_3749 Leptothrix cholodnii SP-6 hypothetical protein YP_001792768.1 4206748 R 395495 CDS YP_001792769.1 171060420 6164020 complement(4207152..4207901) 1 NC_010524.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mpt:Mpe_A1484 haloacid dehalogenase; HAD family hydrolase 4207901 6164020 Lcho_3750 Leptothrix cholodnii SP-6 HAD family hydrolase YP_001792769.1 4207152 R 395495 CDS YP_001792770.1 171060421 6164021 complement(4207912..4208949) 1 NC_010524.1 KEGG: rme:Rmet_1518 fructose-bisphosphate aldolase, class II, Calvin cycle subtype; TIGRFAM: ketose-bisphosphate aldolase; fructose-bisphosphate aldolase, class II, Calvin cycle subtype; PFAM: ketose-bisphosphate aldolase class-II; fructose-bisphosphate aldolase 4208949 6164021 Lcho_3751 Leptothrix cholodnii SP-6 fructose-bisphosphate aldolase YP_001792770.1 4207912 R 395495 CDS YP_001792771.1 171060422 6164022 complement(4208989..4209702) 1 NC_010524.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rme:Rmet_1514 phosphoglycolate phosphatase; HAD family hydrolase 4209702 6164022 Lcho_3752 Leptothrix cholodnii SP-6 HAD family hydrolase YP_001792771.1 4208989 R 395495 CDS YP_001792772.1 171060423 6164023 complement(4209745..4211772) 1 NC_010524.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: rme:Rmet_1513 transketolase; transketolase 4211772 6164023 Lcho_3753 Leptothrix cholodnii SP-6 transketolase YP_001792772.1 4209745 R 395495 CDS YP_001792773.1 171060424 6164024 complement(4211802..4212686) 1 NC_010524.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: rfr:Rfer_1392 phosphoribulokinase; phosphoribulokinase 4212686 6164024 Lcho_3754 Leptothrix cholodnii SP-6 phosphoribulokinase YP_001792773.1 4211802 R 395495 CDS YP_001792774.1 171060425 6164025 complement(4212804..4213901) 1 NC_010524.1 PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: rme:Rmet_1511 inositol phosphatase/fructose-1,6-bisphosphatase; inositol phosphatase/fructose-16-bisphosphatase 4213901 6164025 Lcho_3755 Leptothrix cholodnii SP-6 inositol phosphatase/fructose-16-bisphosphatase YP_001792774.1 4212804 R 395495 CDS YP_001792775.1 171060426 6164026 complement(4213950..4214627) 1 NC_010524.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: ajs:Ajs_0361 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 4214627 6164026 Lcho_3756 Leptothrix cholodnii SP-6 ribulose-phosphate 3-epimerase YP_001792775.1 4213950 R 395495 CDS YP_001792776.1 171060427 6163994 4214751..4215701 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A1477 regulatory protein, LysR family; LysR family transcriptional regulator 4215701 6163994 Lcho_3757 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001792776.1 4214751 D 395495 CDS YP_001792777.1 171060428 6163995 complement(4215702..4216751) 1 NC_010524.1 PFAM: regulatory protein MerR; KEGG: bvi:Bcep1808_5897 putative transcriptional regulator, MerR family; MerR family transcriptional regulator 4216751 6163995 Lcho_3758 Leptothrix cholodnii SP-6 MerR family transcriptional regulator YP_001792777.1 4215702 R 395495 CDS YP_001792778.1 171060429 6163996 4217025..4218287 1 NC_010524.1 PFAM: protein of unknown function DUF445; KEGG: pna:Pnap_0221 protein of unknown function DUF445; hypothetical protein 4218287 6163996 Lcho_3759 Leptothrix cholodnii SP-6 hypothetical protein YP_001792778.1 4217025 D 395495 CDS YP_001792779.1 171060430 6163997 complement(4218307..4218894) 1 NC_010524.1 KEGG: pna:Pnap_3563 hypothetical protein; hypothetical protein 4218894 6163997 Lcho_3760 Leptothrix cholodnii SP-6 hypothetical protein YP_001792779.1 4218307 R 395495 CDS YP_001792780.1 171060431 6163998 complement(4218915..4219574) 1 NC_010524.1 PFAM: protein of unknown function DUF938; Methyltransferase type 11; Methyltransferase type 12; KEGG: pol:Bpro_3364 protein of unknown function DUF938; hypothetical protein 4219574 6163998 Lcho_3761 Leptothrix cholodnii SP-6 hypothetical protein YP_001792780.1 4218915 R 395495 CDS YP_001792781.1 171060432 6163999 complement(4219623..4221575) 1 NC_010524.1 PFAM: K potassium transporter; KEGG: pol:Bpro_4252 K+ potassium transporter; K potassium transporter 4221575 6163999 Lcho_3762 Leptothrix cholodnii SP-6 K potassium transporter YP_001792781.1 4219623 R 395495 CDS YP_001792782.1 171060433 6162950 complement(4221663..4222394) 1 NC_010524.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_4253 two component transcriptional regulator, winged helix family; two component transcriptional regulator 4222394 6162950 Lcho_3763 Leptothrix cholodnii SP-6 two component transcriptional regulator YP_001792782.1 4221663 R 395495 CDS YP_001792783.1 171060434 6162951 complement(4222391..4224028) 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_4254 periplasmic sensor signal transduction histidine kinase; histidine kinase 4224028 6162951 Lcho_3764 Leptothrix cholodnii SP-6 histidine kinase YP_001792783.1 4222391 R 395495 CDS YP_001792784.1 171060435 6162952 complement(4224109..4226358) 1 NC_010524.1 PFAM: von Willebrand factor type A; KEGG: pna:Pnap_1976 von Willebrand factor, type A; von Willebrand factor type A 4226358 6162952 Lcho_3765 Leptothrix cholodnii SP-6 von Willebrand factor type A YP_001792784.1 4224109 R 395495 CDS YP_001792785.1 171060436 6162953 complement(4226372..4227178) 1 NC_010524.1 PFAM: ATPase associated with various cellular activities AAA_5; CbbQ/NirQ/NorQ domain protein; KEGG: pna:Pnap_1977 CbbQ/NirQ/NorQ C-terminal domain protein; CbbQ/NirQ/NorQ domain-containing protein 4227178 6162953 Lcho_3766 Leptothrix cholodnii SP-6 CbbQ/NirQ/NorQ domain-containing protein YP_001792785.1 4226372 R 395495 CDS YP_001792786.1 171060437 6162954 complement(4227514..4228896) 1 NC_010524.1 catalyzes the carboxylation of D-ribulose 1,5-bisphosphate in carbon dioxide fixation; ribulose bisphosphate carboxylase 4228896 6162954 Lcho_3767 Leptothrix cholodnii SP-6 ribulose bisphosphate carboxylase YP_001792786.1 4227514 R 395495 CDS YP_001792787.1 171060438 6162955 complement(4229002..4229871) 1 NC_010524.1 PFAM: protein of unknown function DUF323; KEGG: ter:Tery_4351 serine/threonine protein kinase; hypothetical protein 4229871 6162955 Lcho_3768 Leptothrix cholodnii SP-6 hypothetical protein YP_001792787.1 4229002 R 395495 CDS YP_001792788.1 171060439 6162956 complement(4229925..4230428) 1 NC_010524.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mpt:Mpe_A2426 hypothetical protein; redoxin domain-containing protein 4230428 6162956 Lcho_3769 Leptothrix cholodnii SP-6 redoxin domain-containing protein YP_001792788.1 4229925 R 395495 CDS YP_001792789.1 171060440 6162280 complement(4230425..4231363) 1 NC_010524.1 PFAM: beta-lactamase domain protein; KEGG: mpt:Mpe_A2427 beta lactamase precursor; beta-lactamase domain-containing protein 4231363 6162280 Lcho_3770 Leptothrix cholodnii SP-6 beta-lactamase domain-containing protein YP_001792789.1 4230425 R 395495 CDS YP_001792790.1 171060441 6162281 4231603..4231980 1 NC_010524.1 KEGG: mpt:Mpe_A2428 putative cytochrome c; putative cytochrome c 4231980 6162281 Lcho_3771 Leptothrix cholodnii SP-6 putative cytochrome c YP_001792790.1 4231603 D 395495 CDS YP_001792791.1 171060442 6162282 4232001..4233302 1 NC_010524.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase flavin-binding; KEGG: mpt:Mpe_A2429 putative sulfide dehydrogenase flavocytochrome c oxidoreductase protein; flavocytochrome c sulfide dehydrogenase 4233302 6162282 Lcho_3772 Leptothrix cholodnii SP-6 flavocytochrome c sulfide dehydrogenase YP_001792791.1 4232001 D 395495 CDS YP_001792792.1 171060443 6162283 4233386..4233817 1 NC_010524.1 PFAM: Domain of unknown function DUF1791; KEGG: reh:H16_A3567 conserved hypothetical secreted protein; hypothetical protein 4233817 6162283 Lcho_3773 Leptothrix cholodnii SP-6 hypothetical protein YP_001792792.1 4233386 D 395495 CDS YP_001792793.1 171060444 6162284 4233888..4235012 1 NC_010524.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: dar:Daro_3126 YeeE/YedE; hypothetical protein 4235012 6162284 Lcho_3774 Leptothrix cholodnii SP-6 hypothetical protein YP_001792793.1 4233888 D 395495 CDS YP_001792794.1 171060445 6162285 4235042..4235764 1 NC_010524.1 hypothetical protein 4235764 6162285 Lcho_3775 Leptothrix cholodnii SP-6 hypothetical protein YP_001792794.1 4235042 D 395495 CDS YP_001792795.1 171060446 6162286 complement(4235799..4236920) 1 NC_010524.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: dar:Daro_4041 YeeE/YedE; hypothetical protein 4236920 6162286 Lcho_3776 Leptothrix cholodnii SP-6 hypothetical protein YP_001792795.1 4235799 R 395495 CDS YP_001792796.1 171060447 6161908 complement(4236952..4237134) 1 NC_010524.1 PFAM: SirA family protein; KEGG: tbd:Tbd_0574 hypothetical protein; SirA family protein 4237134 6161908 Lcho_3777 Leptothrix cholodnii SP-6 SirA family protein YP_001792796.1 4236952 R 395495 CDS YP_001792797.1 171060448 6161909 complement(4237229..4238971) 1 NC_010524.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: mpt:Mpe_A2432 putative sulfur oxidation signal peptide protein; 5'-nucleotidase domain-containing protein 4238971 6161909 Lcho_3778 Leptothrix cholodnii SP-6 5'-nucleotidase domain-containing protein YP_001792797.1 4237229 R 395495 CDS YP_001792798.1 171060449 6161910 complement(4239080..4239742) 1 NC_010524.1 KEGG: pol:Bpro_2626 hypothetical protein; hypothetical protein 4239742 6161910 Lcho_3779 Leptothrix cholodnii SP-6 hypothetical protein YP_001792798.1 4239080 R 395495 CDS YP_001792799.1 171060450 6161911 complement(4239763..4240572) 1 NC_010524.1 KEGG: mpt:Mpe_A2434 hypothetical protein; hypothetical protein 4240572 6161911 Lcho_3780 Leptothrix cholodnii SP-6 hypothetical protein YP_001792799.1 4239763 R 395495 CDS YP_001792800.1 171060451 6161912 complement(4240658..4240969) 1 NC_010524.1 PFAM: Sulphur oxidation protein SoxZ; KEGG: mpt:Mpe_A2435 hypothetical protein; sulfur oxidation protein SoxZ 4240969 6161912 Lcho_3781 Leptothrix cholodnii SP-6 sulfur oxidation protein SoxZ YP_001792800.1 4240658 R 395495 CDS YP_001792801.1 171060452 6161913 complement(4240987..4241445) 1 NC_010524.1 KEGG: mpt:Mpe_A2436 hypothetical protein; hypothetical protein 4241445 6161913 Lcho_3782 Leptothrix cholodnii SP-6 hypothetical protein YP_001792801.1 4240987 R 395495 CDS YP_001792802.1 171060453 6161914 complement(4241567..4242634) 1 NC_010524.1 PFAM: cytochrome c class I; KEGG: mpt:Mpe_A2437 diheme cytochrome c SoxD; cytochrome c class I 4242634 6161914 Lcho_3783 Leptothrix cholodnii SP-6 cytochrome c class I YP_001792802.1 4241567 R 395495 CDS YP_001792803.1 171060454 6161829 complement(4242618..4243991) 1 NC_010524.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: mpt:Mpe_A2438 putative sulfite oxidase molybdopterin subunit; molybdopterin-binding oxidoreductase 4243991 6161829 Lcho_3784 Leptothrix cholodnii SP-6 molybdopterin-binding oxidoreductase YP_001792803.1 4242618 R 395495 CDS YP_001792804.1 171060455 6161830 complement(4244223..4245047) 1 NC_010524.1 KEGG: aav:Aave_3377 putative transmembrane anti-sigma factor; putative transmembrane anti-sigma factor 4245047 6161830 Lcho_3785 Leptothrix cholodnii SP-6 putative transmembrane anti-sigma factor YP_001792804.1 4244223 R 395495 CDS YP_001792805.1 171060456 6161831 complement(4245066..4245608) 1 NC_010524.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: aav:Aave_3376 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 4245608 6161831 Lcho_3786 Leptothrix cholodnii SP-6 ECF subfamily RNA polymerase sigma-24 factor YP_001792805.1 4245066 R 395495 CDS YP_001792806.1 171060457 6161832 complement(4245645..4246034) 1 NC_010524.1 PFAM: Secreted repeat of unknown function; KEGG: dar:Daro_0520 secreted repeat of unknown function; hypothetical protein 4246034 6161832 Lcho_3787 Leptothrix cholodnii SP-6 hypothetical protein YP_001792806.1 4245645 R 395495 CDS YP_001792807.1 171060458 6161833 4246192..4247208 1 NC_010524.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: aeh:Mlg_1275 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein 4247208 6161833 Lcho_3788 Leptothrix cholodnii SP-6 C4-dicarboxylate transporter/malic acid transport protein YP_001792807.1 4246192 D 395495 CDS YP_001792808.1 171060459 6161834 4247337..4249127 1 NC_010524.1 PFAM: type II and III secretion system protein; NolW domain protein; KEGG: rme:Rmet_4706 type II and III secretion system protein; type II and III secretion system protein 4249127 6161834 Lcho_3789 Leptothrix cholodnii SP-6 type II and III secretion system protein YP_001792808.1 4247337 D 395495 CDS YP_001792809.1 171060460 6160717 complement(4249158..4249439) 1 NC_010524.1 hypothetical protein 4249439 6160717 Lcho_3790 Leptothrix cholodnii SP-6 hypothetical protein YP_001792809.1 4249158 R 395495 CDS YP_001792810.1 171060461 6160718 complement(4249503..4250156) 1 NC_010524.1 PFAM: electron transport protein SCO1/SenC; KEGG: rso:RSc2292 putative transmembrane protein; electron transport protein SCO1/SenC 4250156 6160718 Lcho_3791 Leptothrix cholodnii SP-6 electron transport protein SCO1/SenC YP_001792810.1 4249503 R 395495 CDS YP_001792811.1 171060462 6160719 complement(4250210..4252117) 1 NC_010524.1 KEGG: rme:Rmet_4696 hypothetical protein; hypothetical protein 4252117 6160719 Lcho_3792 Leptothrix cholodnii SP-6 hypothetical protein YP_001792811.1 4250210 R 395495 CDS YP_001792812.1 171060463 6160720 complement(4252114..4252896) 1 NC_010524.1 PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: gur:Gura_3046 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 4252896 6160720 Lcho_3793 Leptothrix cholodnii SP-6 FKBP-type peptidylprolyl isomerase YP_001792812.1 4252114 R 395495 CDS YP_001792813.1 171060464 6160721 complement(4252992..4258913) 1 NC_010524.1 PFAM: Fibronectin type III domain protein; multicopper oxidase type 2; KEGG: gme:Gmet_2163 integrins alpha chain:multicopper oxidase, type 2; fibronectin type III domain-containing protein 4258913 6160721 Lcho_3794 Leptothrix cholodnii SP-6 fibronectin type III domain-containing protein YP_001792813.1 4252992 R 395495 CDS YP_001792814.1 171060465 6160722 4259551..4260702 1 NC_010524.1 PFAM: chemotaxis sensory transducer; KEGG: rfr:Rfer_0898 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4260702 6160722 Lcho_3795 Leptothrix cholodnii SP-6 methyl-accepting chemotaxis sensory transducer YP_001792814.1 4259551 D 395495 CDS YP_001792815.1 171060466 6160723 4260750..4261079 1 NC_010524.1 PFAM: response regulator receiver; KEGG: rfr:Rfer_0899 response regulator receiver domain protein; response regulator receiver protein 4261079 6160723 Lcho_3796 Leptothrix cholodnii SP-6 response regulator receiver protein YP_001792815.1 4260750 D 395495 CDS YP_001792816.1 171060467 6160785 4261096..4261428 1 NC_010524.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rfr:Rfer_0900 anti-sigma-factor antagonist (STAS) domain protein; anti-sigma-factor antagonist 4261428 6160785 Lcho_3797 Leptothrix cholodnii SP-6 anti-sigma-factor antagonist YP_001792816.1 4261096 D 395495 CDS YP_001792817.1 171060468 6160786 4261450..4263648 1 NC_010524.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: rfr:Rfer_0901 CheA signal transduction histidine kinases; CheA signal transduction histidine kinase 4263648 6160786 Lcho_3798 Leptothrix cholodnii SP-6 CheA signal transduction histidine kinase YP_001792817.1 4261450 D 395495 CDS YP_001792818.1 171060469 6160787 4263808..4266126 1 NC_010524.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: azo:azo0407 putative methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4266126 6160787 Lcho_3799 Leptothrix cholodnii SP-6 methyl-accepting chemotaxis sensory transducer YP_001792818.1 4263808 D 395495 CDS YP_001792819.1 171060470 6160788 4266149..4266679 1 NC_010524.1 PFAM: CheW domain protein; KEGG: rfr:Rfer_0903 CheW protein; CheW protein 4266679 6160788 Lcho_3800 Leptothrix cholodnii SP-6 CheW protein YP_001792819.1 4266149 D 395495 CDS YP_001792820.1 171060471 6160789 4266708..4267760 1 NC_010524.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 4267760 6160789 Lcho_3801 Leptothrix cholodnii SP-6 chemotaxis-specific methylesterase YP_001792820.1 4266708 D 395495 CDS YP_001792821.1 171060472 6160790 4267833..4268261 1 NC_010524.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: nha:Nham_4624 protein of unknown function DUF395, YeeE/YedE; hypothetical protein 4268261 6160790 Lcho_3802 Leptothrix cholodnii SP-6 hypothetical protein YP_001792821.1 4267833 D 395495 CDS YP_001792822.1 171060473 6160791 4268269..4268748 1 NC_010524.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: azc:AZC_2083 YeeE/YedE family protein; hypothetical protein 4268748 6160791 Lcho_3803 Leptothrix cholodnii SP-6 hypothetical protein YP_001792822.1 4268269 D 395495 CDS YP_001792823.1 171060474 6160483 4268904..4269917 1 NC_010524.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mpt:Mpe_A0122 thiosulfate binding protein; sulfate ABC transporter substrate-binding protein 4269917 6160483 Lcho_3804 Leptothrix cholodnii SP-6 sulfate ABC transporter substrate-binding protein YP_001792823.1 4268904 D 395495 CDS YP_001792824.1 171060475 6160484 4269924..4270757 1 NC_010524.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A0124 ABC type transporter; sulfate ABC transporter permease 4270757 6160484 Lcho_3805 Leptothrix cholodnii SP-6 sulfate ABC transporter permease YP_001792824.1 4269924 D 395495 CDS YP_001792825.1 171060476 6160485 4270757..4271770 1 NC_010524.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A0125 ABC type transporter; sulfate ABC transporter permease 4271770 6160485 Lcho_3806 Leptothrix cholodnii SP-6 sulfate ABC transporter permease YP_001792825.1 4270757 D 395495 CDS YP_001792826.1 171060477 6160486 4271798..4272865 1 NC_010524.1 KEGG: mpt:Mpe_A0126 ABC type ATPase; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter ATPase 4272865 6160486 Lcho_3807 Leptothrix cholodnii SP-6 sulfate ABC transporter ATPase YP_001792826.1 4271798 D 395495 CDS YP_001792827.1 171060478 6160487 complement(4272914..4274371) 1 NC_010524.1 PFAM: PASTA domain containing protein; KEGG: azo:azo1264 putative transmembrane sensor protein; protein PASTA domain-containing protein 4274371 6160487 Lcho_3808 Leptothrix cholodnii SP-6 protein PASTA domain-containing protein YP_001792827.1 4272914 R 395495 CDS YP_001792828.1 171060479 6160488 complement(4274489..4276087) 1 NC_010524.1 PFAM: gamma-glutamyltranspeptidase; KEGG: bxe:Bxe_B1050 gamma-glutamyltransferase; gamma-glutamyltransferase 4276087 6160488 Lcho_3809 Leptothrix cholodnii SP-6 gamma-glutamyltransferase YP_001792828.1 4274489 R 395495 CDS YP_001792829.1 171060480 6160489 complement(4276165..4277103) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_3039 transcriptional regulator, LysR family; LysR family transcriptional regulator 4277103 6160489 Lcho_3810 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001792829.1 4276165 R 395495 CDS YP_001792830.1 171060481 6160618 4277298..4277705 1 NC_010524.1 KEGG: mpt:Mpe_A0118 hypothetical protein; hypothetical protein 4277705 6160618 Lcho_3811 Leptothrix cholodnii SP-6 hypothetical protein YP_001792830.1 4277298 D 395495 CDS YP_001792831.1 171060482 6160619 complement(4277729..4278403) 1 NC_010524.1 PFAM: Phosphoglycerate mutase; KEGG: vei:Veis_1484 phosphoglycerate mutase; phosphoglycerate mutase 4278403 6160619 Lcho_3812 Leptothrix cholodnii SP-6 phosphoglycerate mutase YP_001792831.1 4277729 R 395495 CDS YP_001792832.1 171060483 6160620 4278557..4279018 1 NC_010524.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 4279018 6160620 Lcho_3813 Leptothrix cholodnii SP-6 preprotein translocase subunit SecB YP_001792832.1 4278557 D 395495 CDS YP_001792833.1 171060484 6160621 4279051..4280064 1 NC_010524.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 4280064 gpsA 6160621 gpsA Leptothrix cholodnii SP-6 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_001792833.1 4279051 D 395495 CDS YP_001792834.1 171060485 6160622 complement(4280091..4280561) 1 NC_010524.1 TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mpt:Mpe_A3185 putative tRNA/rRNA methyltransferase protein; RNA methyltransferase 4280561 6160622 Lcho_3815 Leptothrix cholodnii SP-6 RNA methyltransferase YP_001792834.1 4280091 R 395495 CDS YP_001792835.1 171060486 6160623 complement(4280618..4281418) 1 NC_010524.1 KEGG: mpt:Mpe_A3184 putative phosphoribosyl transferase; putative phosphoribosyl transferase 4281418 6160623 Lcho_3816 Leptothrix cholodnii SP-6 putative phosphoribosyl transferase YP_001792835.1 4280618 R 395495 CDS YP_001792836.1 171060487 6160624 4281447..4282379 1 NC_010524.1 KEGG: mpt:Mpe_A3183 biotin synthesis protein BioC; biotin synthesis protein BioC 4282379 6160624 Lcho_3817 Leptothrix cholodnii SP-6 biotin synthesis protein BioC YP_001792836.1 4281447 D 395495 CDS YP_001792837.1 171060488 6160442 4282746..4283912 1 NC_010524.1 TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; cytochrome C oxidase subunit II transmembrane region; KEGG: mpt:Mpe_A3181 putative cytochrome c oxidase polypeptide II precursor; cytochrome c oxidase subunit II 4283912 6160442 Lcho_3818 Leptothrix cholodnii SP-6 cytochrome c oxidase subunit II YP_001792837.1 4282746 D 395495 CDS YP_001792838.1 171060489 6160443 4283942..4285576 1 NC_010524.1 KEGG: ajs:Ajs_3536 cytochrome-c oxidase; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I 4285576 6160443 Lcho_3819 Leptothrix cholodnii SP-6 cytochrome c oxidase subunit I YP_001792838.1 4283942 D 395495 CDS YP_001792839.1 171060490 6160444 4285579..4285692 1 NC_010524.1 hypothetical protein 4285692 6160444 Lcho_3820 Leptothrix cholodnii SP-6 hypothetical protein YP_001792839.1 4285579 D 395495 CDS YP_001792840.1 171060491 6160445 4285697..4286341 1 NC_010524.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 4286341 6160445 Lcho_3821 Leptothrix cholodnii SP-6 cytochrome C oxidase assembly protein YP_001792840.1 4285697 D 395495 CDS YP_001792841.1 171060492 6160446 4286338..4286589 1 NC_010524.1 KEGG: mpt:Mpe_A3178 hypothetical protein; hypothetical protein 4286589 6160446 Lcho_3822 Leptothrix cholodnii SP-6 hypothetical protein YP_001792841.1 4286338 D 395495 CDS YP_001792842.1 171060493 6160447 4286691..4287572 1 NC_010524.1 PFAM: cytochrome c oxidase subunit III; KEGG: mpt:Mpe_A3177 putative cytochrome c oxidase subunit III transmembrane protein; cytochrome c oxidase subunit III 4287572 6160447 Lcho_3823 Leptothrix cholodnii SP-6 cytochrome c oxidase subunit III YP_001792842.1 4286691 D 395495 CDS YP_001792843.1 171060494 6161888 complement(4287678..4287791) 1 NC_010524.1 KEGG: bch:Bcen2424_6561 hypothetical protein; hypothetical protein 4287791 6161888 Lcho_3824 Leptothrix cholodnii SP-6 hypothetical protein YP_001792843.1 4287678 R 395495 CDS YP_001792844.1 171060495 6161889 4287904..4288659 1 NC_010524.1 KEGG: mpt:Mpe_A3176 hypothetical protein; hypothetical protein 4288659 6161889 Lcho_3825 Leptothrix cholodnii SP-6 hypothetical protein YP_001792844.1 4287904 D 395495 CDS YP_001792845.1 171060496 6161890 4288667..4289329 1 NC_010524.1 KEGG: mpt:Mpe_A3175 hypothetical protein; hypothetical protein 4289329 6161890 Lcho_3826 Leptothrix cholodnii SP-6 hypothetical protein YP_001792845.1 4288667 D 395495 CDS YP_001792846.1 171060497 6161891 4289367..4290602 1 NC_010524.1 PFAM: cytochrome oxidase assembly; KEGG: mpt:Mpe_A3174 putative heme O oxygenase (cytochrome aa3-controlling) transmembrane protein; cytochrome oxidase assembly 4290602 6161891 Lcho_3827 Leptothrix cholodnii SP-6 cytochrome oxidase assembly YP_001792846.1 4289367 D 395495 CDS YP_001792847.1 171060498 6161892 4290599..4291516 1 NC_010524.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 4291516 6161892 Lcho_3828 Leptothrix cholodnii SP-6 protoheme IX farnesyltransferase YP_001792847.1 4290599 D 395495 CDS YP_001792848.1 171060499 6161893 4291513..4292148 1 NC_010524.1 PFAM: electron transport protein SCO1/SenC; KEGG: mpt:Mpe_A3172 putative lipoprotein; electron transport protein SCO1/SenC 4292148 6161893 Lcho_3829 Leptothrix cholodnii SP-6 electron transport protein SCO1/SenC YP_001792848.1 4291513 D 395495 CDS YP_001792849.1 171060500 6161894 complement(4292155..4294053) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0181 ferric-enterobactin ABC transporter ATPase; ABC transporter-like protein 4294053 6161894 Lcho_3830 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001792849.1 4292155 R 395495 CDS YP_001792850.1 171060501 6161431 complement(4294152..4294700) 1 NC_010524.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: rfr:Rfer_1153 OmpA/MotB; peptidoglycan-associated lipoprotein 4294700 6161431 Lcho_3831 Leptothrix cholodnii SP-6 peptidoglycan-associated lipoprotein YP_001792850.1 4294152 R 395495 CDS YP_001792851.1 171060502 6161432 complement(4294846..4296504) 1 NC_010524.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mpt:Mpe_A3384 putative apolipoprotein N-acyltransferase transmembrane; apolipoprotein N-acyltransferase 4296504 6161432 Lcho_3832 Leptothrix cholodnii SP-6 apolipoprotein N-acyltransferase YP_001792851.1 4294846 R 395495 CDS YP_001792852.1 171060503 6161433 complement(4296501..4297421) 1 NC_010524.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: mpt:Mpe_A3385 transport protein; hypothetical protein 4297421 6161433 Lcho_3833 Leptothrix cholodnii SP-6 hypothetical protein YP_001792852.1 4296501 R 395495 CDS YP_001792853.1 171060504 6161434 4297590..4298621 1 NC_010524.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mpt:Mpe_A3386 hypothetical protein; cobalamin synthesis protein P47K 4298621 6161434 Lcho_3834 Leptothrix cholodnii SP-6 cobalamin synthesis protein P47K YP_001792853.1 4297590 D 395495 CDS YP_001792854.1 171060505 6161435 4298949..4299437 1 NC_010524.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: aav:Aave_0808 transcriptional regulator, TraR/DksA family; TraR/DksA family transcriptional regulator 4299437 6161435 Lcho_3835 Leptothrix cholodnii SP-6 TraR/DksA family transcriptional regulator YP_001792854.1 4298949 D 395495 CDS YP_001792855.1 171060506 6161436 4299495..4301231 1 NC_010524.1 KEGG: mpt:Mpe_A3388 hypothetical protein; hypothetical protein 4301231 6161436 Lcho_3836 Leptothrix cholodnii SP-6 hypothetical protein YP_001792855.1 4299495 D 395495 CDS YP_001792856.1 171060507 6161437 4301312..4301848 1 NC_010524.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 4301848 6161437 Lcho_3837 Leptothrix cholodnii SP-6 ATP-dependent protease peptidase subunit YP_001792856.1 4301312 D 395495 CDS YP_001792857.1 171060508 6161953 4301845..4303200 1 NC_010524.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 4303200 hslU 6161953 hslU Leptothrix cholodnii SP-6 ATP-dependent protease ATP-binding subunit HslU YP_001792857.1 4301845 D 395495 CDS YP_001792858.1 171060509 6161954 complement(4303224..4304012) 1 NC_010524.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 4304012 6161954 Lcho_3839 Leptothrix cholodnii SP-6 pantothenate kinase YP_001792858.1 4303224 R 395495 CDS YP_001792859.1 171060510 6161955 complement(4304083..4304685) 1 NC_010524.1 KEGG: mpt:Mpe_A3392 hypothetical protein; hypothetical protein 4304685 6161955 Lcho_3840 Leptothrix cholodnii SP-6 hypothetical protein YP_001792859.1 4304083 R 395495 CDS YP_001792860.1 171060511 6161956 complement(4304831..4305667) 1 NC_010524.1 KEGG: dar:Daro_0832 nitrate transport ATP-binding subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; nitrate ABC transporter ATPases C and D 4305667 6161956 Lcho_3841 Leptothrix cholodnii SP-6 nitrate ABC transporter ATPases C and D YP_001792860.1 4304831 R 395495 CDS YP_001792861.1 171060512 6161957 complement(4305683..4306678) 1 NC_010524.1 TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A1391 NO3-/NO2-ABC transporter; nitrate ABC transporter inner membrane subunit 4306678 6161957 Lcho_3842 Leptothrix cholodnii SP-6 nitrate ABC transporter inner membrane subunit YP_001792861.1 4305683 R 395495 CDS YP_001792862.1 171060513 6161958 complement(4306699..4307952) 1 NC_010524.1 KEGG: mpt:Mpe_A1392 NO3-/NO2-ABC transporter; NO3-/NO2-ABC transporter 4307952 6161958 Lcho_3843 Leptothrix cholodnii SP-6 NO3-/NO2-ABC transporter YP_001792862.1 4306699 R 395495 CDS YP_001792863.1 171060514 6161959 4308382..4311672 1 NC_010524.1 KEGG: mpt:Mpe_A0903 methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: ArgK protein; methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; methylmalonyl-CoA mutase large subunit 4311672 6161959 Lcho_3844 Leptothrix cholodnii SP-6 methylmalonyl-CoA mutase large subunit YP_001792863.1 4308382 D 395495 CDS YP_001792864.1 171060515 6162620 complement(4311700..4312662) 1 NC_010524.1 PFAM: beta-lactamase domain protein; KEGG: mpt:Mpe_A1376 methyl parathion hydrolase; beta-lactamase domain-containing protein 4312662 6162620 Lcho_3845 Leptothrix cholodnii SP-6 beta-lactamase domain-containing protein YP_001792864.1 4311700 R 395495 CDS YP_001792865.1 171060516 6162621 4312878..4313045 1 NC_010524.1 KEGG: mpt:Mpe_A1438 hypothetical protein; hypothetical protein 4313045 6162621 Lcho_3846 Leptothrix cholodnii SP-6 hypothetical protein YP_001792865.1 4312878 D 395495 CDS YP_001792866.1 171060517 6162622 4313157..4314854 1 NC_010524.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpt:Mpe_A1437 uncharacterized FAD-dependent dehydrogenase; FAD dependent oxidoreductase 4314854 6162622 Lcho_3847 Leptothrix cholodnii SP-6 FAD dependent oxidoreductase YP_001792866.1 4313157 D 395495 CDS YP_001792867.1 171060518 6162623 complement(4314882..4316267) 1 NC_010524.1 PFAM: protein of unknown function DUF88; KEGG: ajs:Ajs_1706 protein of unknown function DUF88; hypothetical protein 4316267 6162623 Lcho_3848 Leptothrix cholodnii SP-6 hypothetical protein YP_001792867.1 4314882 R 395495 CDS YP_001792868.1 171060519 6162624 4316408..4317901 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mpt:Mpe_A2604 signal transduction histidine kinase glucose-6-phosphate-like protein; histidine kinase 4317901 6162624 Lcho_3849 Leptothrix cholodnii SP-6 histidine kinase YP_001792868.1 4316408 D 395495 CDS YP_001792869.1 171060520 6162625 4317906..4318580 1 NC_010524.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpt:Mpe_A2603 two-component response regulator; two component LuxR family transcriptional regulator 4318580 6162625 Lcho_3850 Leptothrix cholodnii SP-6 two component LuxR family transcriptional regulator YP_001792869.1 4317906 D 395495 CDS YP_001792870.1 171060521 6162626 4318727..4319731 1 NC_010524.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: vei:Veis_4977 40-residue YVTN family beta-propeller repeat protein; hypothetical protein 4319731 6162626 Lcho_3851 Leptothrix cholodnii SP-6 hypothetical protein YP_001792870.1 4318727 D 395495 CDS YP_001792871.1 171060522 6161205 complement(4319778..4320017) 1 NC_010524.1 hypothetical protein 4320017 6161205 Lcho_3852 Leptothrix cholodnii SP-6 hypothetical protein YP_001792871.1 4319778 R 395495 CDS YP_001792872.1 171060523 6161206 complement(4320088..4321839) 1 NC_010524.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: pna:Pnap_0633 sodium/hydrogen exchanger; sodium/hydrogen exchanger 4321839 6161206 Lcho_3853 Leptothrix cholodnii SP-6 sodium/hydrogen exchanger YP_001792872.1 4320088 R 395495 CDS YP_001792873.1 171060524 6161207 4321916..4323103 1 NC_010524.1 catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA; beta-ketothiolase 4323103 6161207 Lcho_3854 Leptothrix cholodnii SP-6 beta-ketothiolase YP_001792873.1 4321916 D 395495 CDS YP_001792874.1 171060525 6161208 complement(4323192..4323584) 1 NC_010524.1 KEGG: bja:blr5152 hypothetical protein; hypothetical protein 4323584 6161208 Lcho_3855 Leptothrix cholodnii SP-6 hypothetical protein YP_001792874.1 4323192 R 395495 CDS YP_001792875.1 171060526 6161209 complement(4323680..4323982) 1 NC_010524.1 KEGG: pol:Bpro_2130 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 4323982 6161209 Lcho_3856 Leptothrix cholodnii SP-6 antibiotic biosynthesis monooxygenase YP_001792875.1 4323680 R 395495 CDS YP_001792876.1 171060527 6161210 4324072..4324626 1 NC_010524.1 PFAM: YaeQ family protein; KEGG: mfa:Mfla_0160 YaeQ; YaeQ family protein 4324626 6161210 Lcho_3857 Leptothrix cholodnii SP-6 YaeQ family protein YP_001792876.1 4324072 D 395495 CDS YP_001792877.1 171060528 6161211 4324766..4326409 1 NC_010524.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 4326409 prfC 6161211 prfC Leptothrix cholodnii SP-6 peptide chain release factor 3 YP_001792877.1 4324766 D 395495 CDS YP_001792878.1 171060529 6161172 complement(4326423..4327595) 1 NC_010524.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: pol:Bpro_3678 L-lactate dehydrogenase (cytochrome); L-lactate dehydrogenase (cytochrome) 4327595 6161172 Lcho_3859 Leptothrix cholodnii SP-6 L-lactate dehydrogenase (cytochrome) YP_001792878.1 4326423 R 395495 CDS YP_001792879.1 171060530 6161173 complement(4327664..4328584) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azo:azo1015 probable transcriptional regulator, LysR family; LysR family transcriptional regulator 4328584 6161173 Lcho_3860 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001792879.1 4327664 R 395495 CDS YP_001792880.1 171060531 6161174 4328818..4329195 1 NC_010524.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 4329195 rpsL 6161174 rpsL Leptothrix cholodnii SP-6 30S ribosomal protein S12 YP_001792880.1 4328818 D 395495 CDS YP_001792881.1 171060532 6161175 4329358..4329828 1 NC_010524.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 4329828 6161175 Lcho_3862 Leptothrix cholodnii SP-6 30S ribosomal protein S7 YP_001792881.1 4329358 D 395495 CDS YP_001792882.1 171060533 6161176 4329913..4332015 1 NC_010524.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 4332015 6161176 Lcho_3863 Leptothrix cholodnii SP-6 elongation factor G YP_001792882.1 4329913 D 395495 CDS YP_001792883.1 171060534 6161177 4332224..4333414 1 NC_010524.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 4333414 6161177 Lcho_3864 Leptothrix cholodnii SP-6 elongation factor Tu YP_001792883.1 4332224 D 395495 CDS YP_001792884.1 171060535 6161527 4333495..4333806 1 NC_010524.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 4333806 rpsJ 6161527 rpsJ Leptothrix cholodnii SP-6 30S ribosomal protein S10 YP_001792884.1 4333495 D 395495 CDS YP_001792885.1 171060536 6161529 complement(4334319..4338542) 1 NC_010524.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 4338542 6161529 Lcho_3866 Leptothrix cholodnii SP-6 DNA-directed RNA polymerase subunit beta' YP_001792885.1 4334319 R 395495 CDS YP_001792886.1 171060537 6161530 complement(4338555..4342682) 1 NC_010524.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 4342682 rpoB 6161530 rpoB Leptothrix cholodnii SP-6 DNA-directed RNA polymerase subunit beta YP_001792886.1 4338555 R 395495 CDS YP_001792887.1 171060538 6161531 complement(4343023..4343397) 1 NC_010524.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 4343397 rplL 6161531 rplL Leptothrix cholodnii SP-6 50S ribosomal protein L7/L12 YP_001792887.1 4343023 R 395495 CDS YP_001792888.1 171060539 6161532 complement(4343431..4343979) 1 NC_010524.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 4343979 rplJ 6161532 rplJ Leptothrix cholodnii SP-6 50S ribosomal protein L10 YP_001792888.1 4343431 R 395495 CDS YP_001792889.1 171060540 6162490 complement(4344259..4344972) 1 NC_010524.1 PFAM: ribosomal protein L1; KEGG: mpt:Mpe_A3454 50S ribosomal protein L1; 50S ribosomal protein L1 4344972 6162490 Lcho_3870 Leptothrix cholodnii SP-6 50S ribosomal protein L1 YP_001792889.1 4344259 R 395495 CDS YP_001792890.1 171060541 6162491 complement(4344974..4345405) 1 NC_010524.1 PFAM: ribosomal protein L11; KEGG: bte:BTH_I3080 ribosomal protein L11; 50S ribosomal protein L11 4345405 6162491 Lcho_3871 Leptothrix cholodnii SP-6 50S ribosomal protein L11 YP_001792890.1 4344974 R 395495 CDS YP_001792891.1 171060542 6162492 complement(4345559..4346125) 1 NC_010524.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: mpt:Mpe_A3456 transcription antitermination protein NusG; NusG antitermination factor 4346125 6162492 Lcho_3872 Leptothrix cholodnii SP-6 NusG antitermination factor YP_001792891.1 4345559 R 395495 CDS YP_001792892.1 171060543 6162493 complement(4346156..4346539) 1 NC_010524.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 4346539 secE 6162493 secE Leptothrix cholodnii SP-6 preprotein translocase subunit SecE YP_001792892.1 4346156 R 395495 CDS YP_001792893.1 171060544 6162495 complement(4346754..4347944) 1 NC_010524.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 4347944 6162495 Lcho_3874 Leptothrix cholodnii SP-6 elongation factor Tu YP_001792893.1 4346754 R 395495 CDS YP_001792894.1 171060545 6161045 complement(4348471..4349217) 1 NC_010524.1 TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; KEGG: bbr:BB0210 uracil-DNA glycosylase; uracil-DNA glycosylase 4349217 6161045 Lcho_3875 Leptothrix cholodnii SP-6 uracil-DNA glycosylase YP_001792894.1 4348471 R 395495 CDS YP_001792895.1 171060546 6163446 complement(4349225..4350013) 1 NC_010524.1 PFAM: Indole-3-glycerol phosphate synthase; KEGG: mpt:Mpe_A3460 indole-3-glycerol-phosphate synthase; indole-3-glycerol-phosphate synthase 4350013 6163446 Lcho_3876 Leptothrix cholodnii SP-6 indole-3-glycerol-phosphate synthase YP_001792895.1 4349225 R 395495 CDS YP_001792896.1 171060547 6163447 complement(4350024..4351061) 1 NC_010524.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 4351061 trpD 6163447 trpD Leptothrix cholodnii SP-6 anthranilate phosphoribosyltransferase YP_001792896.1 4350024 R 395495 CDS YP_001792897.1 171060548 6163448 complement(4351105..4351671) 1 NC_010524.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: mpt:Mpe_A3462 putative panthranilate synthase component II (glutamine amido-transferase) protein; glutamine amidotransferase of anthranilate synthase 4351671 6163448 Lcho_3878 Leptothrix cholodnii SP-6 glutamine amidotransferase of anthranilate synthase YP_001792897.1 4351105 R 395495 CDS YP_001792898.1 171060549 6163449 4351966..4353159 1 NC_010524.1 PFAM: type II secretion system protein; KEGG: tbd:Tbd_1294 type II secretion system protein F; type II secretion system protein 4353159 6163449 Lcho_3879 Leptothrix cholodnii SP-6 type II secretion system protein YP_001792898.1 4351966 D 395495 CDS YP_001792899.1 171060550 6163450 4353319..4355022 1 NC_010524.1 PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: tbd:Tbd_1295 type II secretion system protein; type II secretion system protein E 4355022 6163450 Lcho_3880 Leptothrix cholodnii SP-6 type II secretion system protein E YP_001792899.1 4353319 D 395495 CDS YP_001792900.1 171060551 6163451 4355003..4356361 1 NC_010524.1 KEGG: tbd:Tbd_1296 hypothetical protein; hypothetical protein 4356361 6163451 Lcho_3881 Leptothrix cholodnii SP-6 hypothetical protein YP_001792900.1 4355003 D 395495 CDS YP_001792901.1 171060552 6163452 4356358..4356897 1 NC_010524.1 KEGG: ppf:Pput_2291 hypothetical protein; hypothetical protein 4356897 6163452 Lcho_3882 Leptothrix cholodnii SP-6 hypothetical protein YP_001792901.1 4356358 D 395495 CDS YP_001792902.1 171060553 6162333 4356894..4357514 1 NC_010524.1 KEGG: tbd:Tbd_1299 probable prolin-rich transmembrane protein; hypothetical protein 4357514 6162333 Lcho_3883 Leptothrix cholodnii SP-6 hypothetical protein YP_001792902.1 4356894 D 395495 CDS YP_001792903.1 171060554 6162334 4357511..4359793 1 NC_010524.1 PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: tbd:Tbd_1300 type II secretion system protein D; type II and III secretion system protein 4359793 6162334 Lcho_3884 Leptothrix cholodnii SP-6 type II and III secretion system protein YP_001792903.1 4357511 D 395495 CDS YP_001792904.1 171060555 6162335 4359790..4360275 1 NC_010524.1 KEGG: mfa:Mfla_2413 methylation; hypothetical protein 4360275 6162335 Lcho_3885 Leptothrix cholodnii SP-6 hypothetical protein YP_001792904.1 4359790 D 395495 CDS YP_001792905.1 171060556 6162336 4360281..4360649 1 NC_010524.1 PFAM: type II secretion system protein G; KEGG: tbd:Tbd_1441 type II secretion system protein G; type II secretion system protein G 4360649 6162336 Lcho_3886 Leptothrix cholodnii SP-6 type II secretion system protein G YP_001792905.1 4360281 D 395495 CDS YP_001792906.1 171060557 6162337 4360643..4361437 1 NC_010524.1 KEGG: ppu:PP_3475 hypothetical protein; hypothetical protein 4361437 6162337 Lcho_3887 Leptothrix cholodnii SP-6 hypothetical protein YP_001792906.1 4360643 D 395495 CDS YP_001792907.1 171060558 6162338 complement(4361471..4362481) 1 NC_010524.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: pfo:Pfl_1980 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 4362481 6162338 Lcho_3888 Leptothrix cholodnii SP-6 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001792907.1 4361471 R 395495 CDS YP_001792908.1 171060559 6162339 complement(4362478..4364103) 1 NC_010524.1 PFAM: Extracellular ligand-binding receptor; KEGG: pfo:Pfl_1979 cytochrome c, putative; extracellular ligand-binding receptor 4364103 6162339 Lcho_3889 Leptothrix cholodnii SP-6 extracellular ligand-binding receptor YP_001792908.1 4362478 R 395495 CDS YP_001792909.1 171060560 6162049 complement(4364113..4364799) 1 NC_010524.1 PFAM: electron transport protein SCO1/SenC; KEGG: pen:PSEEN2852 SCO1/SenC family protein; electron transport protein SCO1/SenC 4364799 6162049 Lcho_3890 Leptothrix cholodnii SP-6 electron transport protein SCO1/SenC YP_001792909.1 4364113 R 395495 CDS YP_001792910.1 171060561 6162050 complement(4364835..4365503) 1 NC_010524.1 PFAM: electron transport protein SCO1/SenC; KEGG: pen:PSEEN2853 Sco1/SenC family protein; electron transport protein SCO1/SenC 4365503 6162050 Lcho_3891 Leptothrix cholodnii SP-6 electron transport protein SCO1/SenC YP_001792910.1 4364835 R 395495 CDS YP_001792911.1 171060562 6162051 complement(4365500..4367482) 1 NC_010524.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: cytochrome d1 heme region; KEGG: pfo:Pfl_1976 hypothetical protein; hypothetical protein 4367482 6162051 Lcho_3892 Leptothrix cholodnii SP-6 hypothetical protein YP_001792911.1 4365500 R 395495 CDS YP_001792912.1 171060563 6162052 complement(4367572..4373622) 1 NC_010524.1 KEGG: pfo:Pfl_1975 hypothetical protein; hypothetical protein 4373622 6162052 Lcho_3893 Leptothrix cholodnii SP-6 hypothetical protein YP_001792912.1 4367572 R 395495 CDS YP_001792913.1 171060564 6162053 4374212..4375540 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: nmu:Nmul_A0008 periplasmic sensor signal transduction histidine kinase; histidine kinase 4375540 6162053 Lcho_3894 Leptothrix cholodnii SP-6 histidine kinase YP_001792913.1 4374212 D 395495 CDS YP_001792914.1 171060565 6162054 4375550..4376098 1 NC_010524.1 PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: mfa:Mfla_2202 response regulator receiver domain protein (CheY-like); two component Fis family transcriptional regulator 4376098 6162054 Lcho_3895 Leptothrix cholodnii SP-6 two component Fis family transcriptional regulator YP_001792914.1 4375550 D 395495 CDS YP_001792915.1 171060566 6162055 complement(4376123..4377610) 1 NC_010524.1 amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 4377610 6162055 Lcho_3896 Leptothrix cholodnii SP-6 4-alpha-glucanotransferase YP_001792915.1 4376123 R 395495 CDS YP_001792916.1 171060567 6161928 complement(4377610..4379097) 1 NC_010524.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 4379097 6161928 Lcho_3897 Leptothrix cholodnii SP-6 anthranilate synthase component I YP_001792916.1 4377610 R 395495 CDS YP_001792917.1 171060568 6161929 complement(4379431..4380096) 1 NC_010524.1 TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aav:Aave_0440 phosphoglycolate phosphatase; phosphoglycolate phosphatase 4380096 6161929 Lcho_3898 Leptothrix cholodnii SP-6 phosphoglycolate phosphatase YP_001792917.1 4379431 R 395495 CDS YP_001792918.1 171060569 6161930 complement(4380108..4380794) 1 NC_010524.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: ajs:Ajs_0361 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 4380794 6161930 Lcho_3899 Leptothrix cholodnii SP-6 ribulose-phosphate 3-epimerase YP_001792918.1 4380108 R 395495 CDS YP_001792919.1 171060570 6161931 4380860..4381246 1 NC_010524.1 PFAM: ApaG domain protein; KEGG: rso:RSc2878 ApaG; ApaG domain-containing protein 4381246 6161931 Lcho_3900 Leptothrix cholodnii SP-6 ApaG domain-containing protein YP_001792919.1 4380860 D 395495 CDS YP_001792920.1 171060571 6161932 4381243..4383327 1 NC_010524.1 KEGG: mpt:Mpe_A3469 putative site-specific recombinase transmembrane protein; putative site-specific recombinase transmembrane protein 4383327 6161932 Lcho_3901 Leptothrix cholodnii SP-6 putative site-specific recombinase transmembrane protein YP_001792920.1 4381243 D 395495 CDS YP_001792921.1 171060572 6161933 4383458..4384753 1 NC_010524.1 PFAM: MltA domain protein; 3D domain protein; KEGG: mpt:Mpe_A3470 membrane-bound lytic murein transglycosylase A; MltA domain-containing protein 4384753 6161933 Lcho_3902 Leptothrix cholodnii SP-6 MltA domain-containing protein YP_001792921.1 4383458 D 395495 CDS YP_001792922.1 171060573 6161790 complement(4384754..4385866) 1 NC_010524.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: acr:Acry_0567 diguanylate cyclase; diguanylate cyclase 4385866 6161790 Lcho_3903 Leptothrix cholodnii SP-6 diguanylate cyclase YP_001792922.1 4384754 R 395495 CDS YP_001792923.1 171060574 6161791 complement(4385913..4386473) 1 NC_010524.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: mpt:Mpe_A3501 transcriptional regulator-like protein protein; AsnC family transcriptional regulator 4386473 6161791 Lcho_3904 Leptothrix cholodnii SP-6 AsnC family transcriptional regulator YP_001792923.1 4385913 R 395495 CDS YP_001792924.1 171060575 6161792 4386589..4390146 1 NC_010524.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 4390146 6161792 Lcho_3905 Leptothrix cholodnii SP-6 indolepyruvate ferredoxin oxidoreductase YP_001792924.1 4386589 D 395495 CDS YP_001792925.1 171060576 6161793 complement(4390165..4390434) 1 NC_010524.1 TIGRFAM: translation initiation factor IF-1; PFAM: RNA binding S1 domain protein; S1 IF1 family protein; KEGG: dac:Daci_4661 translation initiation factor IF-1; translation initiation factor IF-1 4390434 6161793 Lcho_3906 Leptothrix cholodnii SP-6 translation initiation factor IF-1 YP_001792925.1 4390165 R 395495 CDS YP_001792926.1 171060577 6161794 complement(4390661..4390921) 1 NC_010524.1 hypothetical protein 4390921 6161794 Lcho_3907 Leptothrix cholodnii SP-6 hypothetical protein YP_001792926.1 4390661 R 395495 CDS YP_001792927.1 171060578 6161795 complement(4391161..4391493) 1 NC_010524.1 KEGG: pol:Bpro_3230 hypothetical protein; hypothetical protein 4391493 6161795 Lcho_3908 Leptothrix cholodnii SP-6 hypothetical protein YP_001792927.1 4391161 R 395495 CDS YP_001792928.1 171060579 6161796 complement(4391493..4392440) 1 NC_010524.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 4392440 6161796 Lcho_3909 Leptothrix cholodnii SP-6 glutathione synthetase YP_001792928.1 4391493 R 395495 CDS YP_001792929.1 171060580 6161783 complement(4392489..4393670) 1 NC_010524.1 PFAM: aminoglycoside phosphotransferase; KEGG: mpt:Mpe_A0201 hypothetical protein; aminoglycoside phosphotransferase 4393670 6161783 Lcho_3910 Leptothrix cholodnii SP-6 aminoglycoside phosphotransferase YP_001792929.1 4392489 R 395495 CDS YP_001792930.1 171060581 6161784 4393722..4396313 1 NC_010524.1 PFAM: Organic solvent tolerance protein; KEGG: mpt:Mpe_A0202 putative organic solvent tolerance transmembrane protein; organic solvent tolerance protein 4396313 6161784 Lcho_3911 Leptothrix cholodnii SP-6 organic solvent tolerance protein YP_001792930.1 4393722 D 395495 CDS YP_001792931.1 171060582 6161785 4396310..4397704 1 NC_010524.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: mpt:Mpe_A0203 PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain-containing protein 4397704 6161785 Lcho_3912 Leptothrix cholodnii SP-6 SurA domain-containing protein YP_001792931.1 4396310 D 395495 CDS YP_001792932.1 171060583 6161786 4397712..4398521 1 NC_010524.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 4398521 ksgA 6161786 ksgA Leptothrix cholodnii SP-6 dimethyladenosine transferase YP_001792932.1 4397712 D 395495 CDS YP_001792933.1 171060584 6161787 complement(4398782..4399177) 1 NC_010524.1 KEGG: mpt:Mpe_A0205 hypothetical protein; hypothetical protein 4399177 6161787 Lcho_3914 Leptothrix cholodnii SP-6 hypothetical protein YP_001792933.1 4398782 R 395495 CDS YP_001792934.1 171060585 6161788 complement(4399212..4399625) 1 NC_010524.1 PFAM: guanine-specific ribonuclease N1 and T1; KEGG: vei:Veis_4808 guanine-specific ribonuclease N1 and T1; guanine-specific ribonuclease N1 and T1 4399625 6161788 Lcho_3915 Leptothrix cholodnii SP-6 guanine-specific ribonuclease N1 and T1 YP_001792934.1 4399212 R 395495 CDS YP_001792935.1 171060586 6161789 complement(4399939..4402257) 1 NC_010524.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 4402257 6161789 Lcho_3916 Leptothrix cholodnii SP-6 malic enzyme YP_001792935.1 4399939 R 395495 CDS YP_001792936.1 171060587 6161714 4402478..4404610 1 NC_010524.1 KEGG: mpt:Mpe_A0208 two component sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 4404610 6161714 Lcho_3917 Leptothrix cholodnii SP-6 PAS/PAC sensor signal transduction histidine kinase YP_001792936.1 4402478 D 395495 CDS YP_001792937.1 171060588 6161715 4404615..4405262 1 NC_010524.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: aav:Aave_4653 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 4405262 6161715 Lcho_3918 Leptothrix cholodnii SP-6 two component LuxR family transcriptional regulator YP_001792937.1 4404615 D 395495 CDS YP_001792938.1 171060589 6161716 4405362..4406357 1 NC_010524.1 KEGG: mpt:Mpe_A0210 thiamine-phosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein; thiamine-monophosphate kinase 4406357 6161716 Lcho_3919 Leptothrix cholodnii SP-6 thiamine-monophosphate kinase YP_001792938.1 4405362 D 395495 CDS YP_001792939.1 171060590 6161717 4406354..4406911 1 NC_010524.1 PFAM: phosphatidylglycerophosphatase A; KEGG: pol:Bpro_4475 phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A 4406911 6161717 Lcho_3920 Leptothrix cholodnii SP-6 phosphatidylglycerophosphatase A YP_001792939.1 4406354 D 395495 CDS YP_001792940.1 171060591 6161718 4406925..4407434 1 NC_010524.1 PFAM: CinA domain protein; KEGG: ajs:Ajs_0354 CinA domain protein; CinA domain-containing protein 4407434 6161718 Lcho_3921 Leptothrix cholodnii SP-6 CinA domain-containing protein YP_001792940.1 4406925 D 395495 CDS YP_001792941.1 171060592 6161719 complement(4407540..4407938) 1 NC_010524.1 PFAM: ribosomal protein L17; KEGG: pna:Pnap_0346 ribosomal protein L17; 50S ribosomal protein L17 4407938 6161719 Lcho_3922 Leptothrix cholodnii SP-6 50S ribosomal protein L17 YP_001792941.1 4407540 R 395495 CDS YP_001792942.1 171060593 6161720 complement(4408042..4409028) 1 NC_010524.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 4409028 6161720 Lcho_3923 Leptothrix cholodnii SP-6 DNA-directed RNA polymerase subunit alpha YP_001792942.1 4408042 R 395495 CDS YP_001792943.1 171060594 6161662 complement(4409165..4409788) 1 NC_010524.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 4409788 rpsD 6161662 rpsD Leptothrix cholodnii SP-6 30S ribosomal protein S4 YP_001792943.1 4409165 R 395495 CDS YP_001792944.1 171060595 6161663 complement(4410007..4410411) 1 NC_010524.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 4410411 6161663 Lcho_3925 Leptothrix cholodnii SP-6 30S ribosomal protein S11 YP_001792944.1 4410007 R 395495 CDS YP_001792945.1 171060596 6161664 complement(4410442..4410807) 1 NC_010524.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 4410807 rpsM 6161664 rpsM Leptothrix cholodnii SP-6 30S ribosomal protein S13 YP_001792945.1 4410442 R 395495 CDS YP_001792946.1 171060597 6161665 complement(4410843..4410956) 1 NC_010524.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 4410956 rpmJ 6161665 rpmJ Leptothrix cholodnii SP-6 50S ribosomal protein L36 YP_001792946.1 4410843 R 395495 CDS YP_001792947.1 171060598 6161666 complement(4411013..4411231) 1 NC_010524.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 4411231 infA 6161666 infA Leptothrix cholodnii SP-6 translation initiation factor IF-1 YP_001792947.1 4411013 R 395495 CDS YP_001792948.1 171060599 6161667 complement(4411256..4412566) 1 NC_010524.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 4412566 secY 6161667 secY Leptothrix cholodnii SP-6 preprotein translocase subunit SecY YP_001792948.1 4411256 R 395495 CDS YP_001792949.1 171060600 6161668 complement(4412593..4413027) 1 NC_010524.1 late assembly protein; 50S ribosomal protein L15 4413027 rplO 6161668 rplO Leptothrix cholodnii SP-6 50S ribosomal protein L15 YP_001792949.1 4412593 R 395495 CDS YP_001792950.1 171060601 6163725 complement(4413053..4413235) 1 NC_010524.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 4413235 rpmD 6163725 rpmD Leptothrix cholodnii SP-6 50S ribosomal protein L30 YP_001792950.1 4413053 R 395495 CDS YP_001792951.1 171060602 6163726 complement(4413252..4413770) 1 NC_010524.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 4413770 rpsE 6163726 rpsE Leptothrix cholodnii SP-6 30S ribosomal protein S5 YP_001792951.1 4413252 R 395495 CDS YP_001792952.1 171060603 6163727 complement(4413800..4414165) 1 NC_010524.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 4414165 rplR 6163727 rplR Leptothrix cholodnii SP-6 50S ribosomal protein L18 YP_001792952.1 4413800 R 395495 CDS YP_001792953.1 171060604 6163728 complement(4414177..4414710) 1 NC_010524.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 4414710 rplF 6163728 rplF Leptothrix cholodnii SP-6 50S ribosomal protein L6 YP_001792953.1 4414177 R 395495 CDS YP_001792954.1 171060605 6163729 complement(4414727..4415122) 1 NC_010524.1 PFAM: ribosomal protein S8; KEGG: pol:Bpro_0489 ribosomal protein S8; 30S ribosomal protein S8 4415122 6163729 Lcho_3935 Leptothrix cholodnii SP-6 30S ribosomal protein S8 YP_001792954.1 4414727 R 395495 CDS YP_001792955.1 171060606 6163730 complement(4415159..4415464) 1 NC_010524.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 4415464 rpsN 6163730 rpsN Leptothrix cholodnii SP-6 30S ribosomal protein S14 YP_001792955.1 4415159 R 395495 CDS YP_001792956.1 171060607 6163731 complement(4415473..4416024) 1 NC_010524.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 4416024 6163731 Lcho_3937 Leptothrix cholodnii SP-6 50S ribosomal protein L5 YP_001792956.1 4415473 R 395495 CDS YP_001792957.1 171060608 6163583 complement(4416038..4416355) 1 NC_010524.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 4416355 rplX 6163583 rplX Leptothrix cholodnii SP-6 50S ribosomal protein L24 YP_001792957.1 4416038 R 395495 CDS YP_001792958.1 171060609 6163584 complement(4416377..4416745) 1 NC_010524.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 4416745 rplN 6163584 rplN Leptothrix cholodnii SP-6 50S ribosomal protein L14 YP_001792958.1 4416377 R 395495 CDS YP_001792959.1 171060610 6163585 complement(4416977..4418272) 1 NC_010524.1 TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GshA; KEGG: mpt:Mpe_A0173 putative glutamate--cysteine ligase; glutamate--cysteine ligase 4418272 6163585 Lcho_3940 Leptothrix cholodnii SP-6 glutamate--cysteine ligase YP_001792959.1 4416977 R 395495 CDS YP_001792960.1 171060611 6163586 complement(4418402..4419916) 1 NC_010524.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: pol:Bpro_0184 ammonium transporter; ammonium transporter 4419916 6163586 Lcho_3941 Leptothrix cholodnii SP-6 ammonium transporter YP_001792960.1 4418402 R 395495 CDS YP_001792961.1 171060612 6163587 complement(4419939..4420277) 1 NC_010524.1 PFAM: nitrogen regulatory protein P-II; KEGG: mpt:Mpe_A0171 nitrogen regulatory protein P-II-2; nitrogen regulatory protein P-II 4420277 6163587 Lcho_3942 Leptothrix cholodnii SP-6 nitrogen regulatory protein P-II YP_001792961.1 4419939 R 395495 CDS YP_001792962.1 171060613 6163588 4420559..4422073 1 NC_010524.1 KEGG: mpt:Mpe_A0170 putative MG(2+) chelatase family protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI 4422073 6163588 Lcho_3943 Leptothrix cholodnii SP-6 Mg chelatase subunit ChlI YP_001792962.1 4420559 D 395495 CDS YP_001792963.1 171060614 6163589 4422139..4422882 1 NC_010524.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 4422882 6163589 Lcho_3944 Leptothrix cholodnii SP-6 16S ribosomal RNA methyltransferase RsmE YP_001792963.1 4422139 D 395495 CDS YP_001792964.1 171060615 6162931 4423121..4424995 1 NC_010524.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 4424995 6162931 Lcho_3945 Leptothrix cholodnii SP-6 phosphoenolpyruvate carboxykinase YP_001792964.1 4423121 D 395495 CDS YP_001792965.1 171060616 6162932 complement(4425078..4425320) 1 NC_010524.1 hypothetical protein 4425320 6162932 Lcho_3946 Leptothrix cholodnii SP-6 hypothetical protein YP_001792965.1 4425078 R 395495 CDS YP_001792966.1 171060617 6162933 4425458..4426423 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0076 transcriptional regulator, LysR family; LysR family transcriptional regulator 4426423 6162933 Lcho_3947 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001792966.1 4425458 D 395495 CDS YP_001792967.1 171060618 6162934 complement(4426402..4428510) 1 NC_010524.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: fre:Franean1_5550 prolyl oligopeptidase; prolyl oligopeptidase 4428510 6162934 Lcho_3948 Leptothrix cholodnii SP-6 prolyl oligopeptidase YP_001792967.1 4426402 R 395495 CDS YP_001792968.1 171060619 6162935 complement(4428507..4428989) 1 NC_010524.1 PFAM: protein of unknown function UPF0054; KEGG: mpt:Mpe_A3240 hypothetical protein; hypothetical protein 4428989 6162935 Lcho_3949 Leptothrix cholodnii SP-6 hypothetical protein YP_001792968.1 4428507 R 395495 CDS YP_001792969.1 171060620 6162936 complement(4429003..4430127) 1 NC_010524.1 PFAM: PhoH family protein; KEGG: mpt:Mpe_A3239 putative PhoH-like protein; PhoH family protein 4430127 6162936 Lcho_3950 Leptothrix cholodnii SP-6 PhoH family protein YP_001792969.1 4429003 R 395495 CDS YP_001792970.1 171060621 6162937 4430271..4432148 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; KEGG: mpt:Mpe_A3238 signal transduction histidine kinase-like protein; histidine kinase 4432148 6162937 Lcho_3951 Leptothrix cholodnii SP-6 histidine kinase YP_001792970.1 4430271 D 395495 CDS YP_001792971.1 171060622 6162568 4432276..4432944 1 NC_010524.1 PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: mpt:Mpe_A3237 response regulator; two component LuxR family transcriptional regulator 4432944 6162568 Lcho_3952 Leptothrix cholodnii SP-6 two component LuxR family transcriptional regulator YP_001792971.1 4432276 D 395495 CDS YP_001792972.1 171060623 6162569 4433060..4433635 1 NC_010524.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 4433635 ruvA 6162569 ruvA Leptothrix cholodnii SP-6 Holliday junction DNA helicase RuvA YP_001792972.1 4433060 D 395495 CDS YP_001792973.1 171060624 6162570 4433720..4434811 1 NC_010524.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 4434811 ruvB 6162570 ruvB Leptothrix cholodnii SP-6 Holliday junction DNA helicase RuvB YP_001792973.1 4433720 D 395495 CDS YP_001792974.1 171060625 6162571 complement(4434837..4435559) 1 NC_010524.1 PFAM: Phosphoglycerate mutase; KEGG: mpt:Mpe_A0330 putative phosphoglycerate mutase 2 protein; phosphoglycerate mutase 4435559 6162571 Lcho_3955 Leptothrix cholodnii SP-6 phosphoglycerate mutase YP_001792974.1 4434837 R 395495 CDS YP_001792975.1 171060626 6162572 complement(4435573..4435908) 1 NC_010524.1 PFAM: Domain of unknown function DUF1840; KEGG: mpt:Mpe_A0332 hypothetical protein; hypothetical protein 4435908 6162572 Lcho_3956 Leptothrix cholodnii SP-6 hypothetical protein YP_001792975.1 4435573 R 395495 CDS YP_001792976.1 171060627 6162573 complement(4436031..4436756) 1 NC_010524.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mpt:Mpe_A0710 putative 1-acylglycerol-3-phosphate O-acyltransferase; phospholipid/glycerol acyltransferase 4436756 6162573 Lcho_3957 Leptothrix cholodnii SP-6 phospholipid/glycerol acyltransferase YP_001792976.1 4436031 R 395495 CDS YP_001792977.1 171060628 6162574 complement(4436753..4438078) 1 NC_010524.1 KEGG: mpt:Mpe_A0709 putative dihydroorotase-like protein; putative dihydroorotase-like protein 4438078 6162574 Lcho_3958 Leptothrix cholodnii SP-6 putative dihydroorotase-like protein YP_001792977.1 4436753 R 395495 CDS YP_001792978.1 171060629 6162384 complement(4438158..4439120) 1 NC_010524.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 4439120 pyrB 6162384 pyrB Leptothrix cholodnii SP-6 aspartate carbamoyltransferase catalytic subunit YP_001792978.1 4438158 R 395495 CDS YP_001792979.1 171060630 6162385 complement(4439120..4439629) 1 NC_010524.1 PFAM: phosphoribosyltransferase; KEGG: mpt:Mpe_A0707 bifunctional regulator/uracil phosphoribosyltransferase; phosphoribosyltransferase 4439629 6162385 Lcho_3960 Leptothrix cholodnii SP-6 phosphoribosyltransferase YP_001792979.1 4439120 R 395495 CDS YP_001792980.1 171060631 6162386 complement(4439626..4440075) 1 NC_010524.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 4440075 6162386 Lcho_3961 Leptothrix cholodnii SP-6 Holliday junction resolvase-like protein YP_001792980.1 4439626 R 395495 CDS YP_001792981.1 171060632 6162387 complement(4440072..4440653) 1 NC_010524.1 PFAM: protein of unknown function DUF179; KEGG: mpt:Mpe_A0705 hypothetical protein; hypothetical protein 4440653 6162387 Lcho_3962 Leptothrix cholodnii SP-6 hypothetical protein YP_001792981.1 4440072 R 395495 CDS YP_001792982.1 171060633 6162388 4440691..4442226 1 NC_010524.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: mpt:Mpe_A0704 deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photo-lyase 4442226 6162388 Lcho_3963 Leptothrix cholodnii SP-6 deoxyribodipyrimidine photo-lyase YP_001792982.1 4440691 D 395495 CDS YP_001792983.1 171060634 6162389 complement(4442204..4445311) 1 NC_010524.1 PFAM: acriflavin resistance protein; KEGG: mpt:Mpe_A2137 putative transporter lipoprotein transmembrane; acriflavin resistance protein 4445311 6162389 Lcho_3964 Leptothrix cholodnii SP-6 acriflavin resistance protein YP_001792983.1 4442204 R 395495 CDS YP_001792984.1 171060635 6162390 complement(4445308..4446396) 1 NC_010524.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mpt:Mpe_A2136 putative transporter lipoprotein transmembrane; RND family efflux transporter MFP subunit 4446396 6162390 Lcho_3965 Leptothrix cholodnii SP-6 RND family efflux transporter MFP subunit YP_001792984.1 4445308 R 395495 CDS YP_001792985.1 171060636 6162377 complement(4446626..4447663) 1 NC_010524.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rfr:Rfer_1673 diguanylate cyclase; diguanylate cyclase 4447663 6162377 Lcho_3966 Leptothrix cholodnii SP-6 diguanylate cyclase YP_001792985.1 4446626 R 395495 CDS YP_001792986.1 171060637 6162378 complement(4447700..4454944) 1 NC_010524.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: aav:Aave_0905 CheA signal transduction histidine kinase; CheA signal transduction histidine kinase 4454944 6162378 Lcho_3967 Leptothrix cholodnii SP-6 CheA signal transduction histidine kinase YP_001792986.1 4447700 R 395495 CDS YP_001792987.1 171060638 6162379 complement(4454974..4457307) 1 NC_010524.1 PFAM: chemotaxis sensory transducer; KEGG: mpt:Mpe_A3187 twitching motility protein; methyl-accepting chemotaxis sensory transducer 4457307 6162379 Lcho_3968 Leptothrix cholodnii SP-6 methyl-accepting chemotaxis sensory transducer YP_001792987.1 4454974 R 395495 CDS YP_001792988.1 171060639 6162380 complement(4457362..4457892) 1 NC_010524.1 PFAM: CheW domain protein; KEGG: mpt:Mpe_A3188 twitching motility signal transduction protein; CheW protein 4457892 6162380 Lcho_3969 Leptothrix cholodnii SP-6 CheW protein YP_001792988.1 4457362 R 395495 CDS YP_001792989.1 171060640 6162381 complement(4457908..4458273) 1 NC_010524.1 PFAM: response regulator receiver; KEGG: mpt:Mpe_A3189 twitching motility protein; response regulator receiver protein 4458273 6162381 Lcho_3970 Leptothrix cholodnii SP-6 response regulator receiver protein YP_001792989.1 4457908 R 395495 CDS YP_001792990.1 171060641 6162382 complement(4458353..4458790) 1 NC_010524.1 PFAM: response regulator receiver; KEGG: mpt:Mpe_A3190 twitching motility, CheY-like protein; response regulator receiver protein 4458790 6162382 Lcho_3971 Leptothrix cholodnii SP-6 response regulator receiver protein YP_001792990.1 4458353 R 395495 CDS YP_001792991.1 171060642 6162383 complement(4458812..4458964) 1 NC_010524.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: mpt:Mpe_A3191 rubredoxin; rubredoxin-type Fe(Cys)4 protein 4458964 6162383 Lcho_3972 Leptothrix cholodnii SP-6 rubredoxin-type Fe(Cys)4 protein YP_001792991.1 4458812 R 395495 CDS YP_001792992.1 171060643 6161960 4459178..4460110 1 NC_010524.1 PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: mpt:Mpe_A3192 hydroxymethylpyrimidine kinase; phosphomethylpyrimidine kinase type-1 4460110 6161960 Lcho_3973 Leptothrix cholodnii SP-6 phosphomethylpyrimidine kinase type-1 YP_001792992.1 4459178 D 395495 CDS YP_001792993.1 171060644 6161961 4460151..4461464 1 NC_010524.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 4461464 6161961 Lcho_3974 Leptothrix cholodnii SP-6 glutamate-1-semialdehyde aminotransferase YP_001792993.1 4460151 D 395495 CDS YP_001792994.1 171060645 6161962 4461513..4462388 1 NC_010524.1 PFAM: Aldose 1-epimerase; KEGG: mpt:Mpe_A3194 aldose 1-epimerase; aldose 1-epimerase 4462388 6161962 Lcho_3975 Leptothrix cholodnii SP-6 aldose 1-epimerase YP_001792994.1 4461513 D 395495 CDS YP_001792995.1 171060646 6161963 complement(4462390..4463478) 1 NC_010524.1 PFAM: phosphofructokinase; KEGG: dac:Daci_5255 6-phosphofructokinase; 6-phosphofructokinase 4463478 6161963 Lcho_3976 Leptothrix cholodnii SP-6 6-phosphofructokinase YP_001792995.1 4462390 R 395495 CDS YP_001792996.1 171060647 6161964 4463534..4464976 1 NC_010524.1 TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mpt:Mpe_A3197 putative UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase transmembrane protein; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 4464976 6161964 Lcho_3977 Leptothrix cholodnii SP-6 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_001792996.1 4463534 D 395495 CDS YP_001792997.1 171060648 6161965 4464979..4465602 1 NC_010524.1 PFAM: protein of unknown function UPF0227; KEGG: pna:Pnap_3401 protein of unknown function UPF0227; hypothetical protein 4465602 6161965 Lcho_3978 Leptothrix cholodnii SP-6 hypothetical protein YP_001792997.1 4464979 D 395495 CDS YP_001792998.1 171060649 6161966 4465655..4466395 1 NC_010524.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rfr:Rfer_4047 3-oxoacyl-(acyl-carrier-protein) reductase; short-chain dehydrogenase/reductase SDR 4466395 6161966 Lcho_3979 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001792998.1 4465655 D 395495 CDS YP_001792999.1 171060650 6161502 4466435..4468552 1 NC_010524.1 PFAM: ribonuclease II; KEGG: mpt:Mpe_A3199 hypothetical protein; ribonuclease II 4468552 6161502 Lcho_3980 Leptothrix cholodnii SP-6 ribonuclease II YP_001792999.1 4466435 D 395495 CDS YP_001793000.1 171060651 6161503 4468567..4469457 1 NC_010524.1 TIGRFAM: TonB family protein; KEGG: mpt:Mpe_A3200 periplasmic protein/biopolymer transport; TonB family protein 4469457 6161503 Lcho_3981 Leptothrix cholodnii SP-6 TonB family protein YP_001793000.1 4468567 D 395495 CDS YP_001793001.1 171060652 6161504 4469483..4470286 1 NC_010524.1 TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: mpt:Mpe_A3202 putative peptidoglycan biosynthesis-related protein; monofunctional biosynthetic peptidoglycan transglycosylase 4470286 6161504 Lcho_3982 Leptothrix cholodnii SP-6 monofunctional biosynthetic peptidoglycan transglycosylase YP_001793001.1 4469483 D 395495 CDS YP_001793002.1 171060653 6161505 4470331..4470957 1 NC_010524.1 KEGG: mpt:Mpe_A3203 hypothetical protein; hypothetical protein 4470957 6161505 Lcho_3983 Leptothrix cholodnii SP-6 hypothetical protein YP_001793002.1 4470331 D 395495 CDS YP_001793003.1 171060654 6161506 4470954..4471541 1 NC_010524.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mpt:Mpe_A3204 thioredoxin family protein, putative; alkyl hydroperoxide reductase 4471541 6161506 Lcho_3984 Leptothrix cholodnii SP-6 alkyl hydroperoxide reductase YP_001793003.1 4470954 D 395495 CDS YP_001793004.1 171060655 6161507 4471907..4472362 1 NC_010524.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: mpt:Mpe_A3206 putative biotin carboxyl carrier protein of acetyl-CoA carboxylase (BccP); acetyl-CoA carboxylase, biotin carboxyl carrier protein 4472362 6161507 Lcho_3985 Leptothrix cholodnii SP-6 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_001793004.1 4471907 D 395495 CDS YP_001793005.1 171060656 6161508 4472373..4473728 1 NC_010524.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mpt:Mpe_A3207 putative biotin carboxylase protein; acetyl-CoA carboxylase, biotin carboxylase 4473728 6161508 Lcho_3986 Leptothrix cholodnii SP-6 acetyl-CoA carboxylase, biotin carboxylase YP_001793005.1 4472373 D 395495 CDS YP_001793006.1 171060657 6159692 4473752..4474657 1 NC_010524.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 4474657 prmA 6159692 prmA Leptothrix cholodnii SP-6 50S ribosomal protein L11 methyltransferase YP_001793006.1 4473752 D 395495 CDS YP_001793007.1 171060658 6159693 4474679..4476004 1 NC_010524.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: mpt:Mpe_A3209 hypothetical protein; Zinc finger-domain-containing protein 4476004 6159693 Lcho_3988 Leptothrix cholodnii SP-6 Zinc finger-domain-containing protein YP_001793007.1 4474679 D 395495 CDS YP_001793008.1 171060659 6159694 complement(4476082..4476588) 1 NC_010524.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mpt:Mpe_A3433 AhpC/TSA-family protein; redoxin domain-containing protein 4476588 6159694 Lcho_3989 Leptothrix cholodnii SP-6 redoxin domain-containing protein YP_001793008.1 4476082 R 395495 CDS YP_001793009.1 171060660 6159695 complement(4476729..4477025) 1 NC_010524.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 4477025 rpsQ 6159695 rpsQ Leptothrix cholodnii SP-6 30S ribosomal protein S17 YP_001793009.1 4476729 R 395495 CDS YP_001793010.1 171060661 6159696 complement(4477025..4477222) 1 NC_010524.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 4477222 6159696 Lcho_3991 Leptothrix cholodnii SP-6 50S ribosomal protein L29 YP_001793010.1 4477025 R 395495 CDS YP_001793011.1 171060662 6159697 complement(4477237..4477653) 1 NC_010524.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 4477653 rplP 6159697 rplP Leptothrix cholodnii SP-6 50S ribosomal protein L16 YP_001793011.1 4477237 R 395495 CDS YP_001793012.1 171060663 6159698 complement(4477657..4478514) 1 NC_010524.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 4478514 rpsC 6159698 rpsC Leptothrix cholodnii SP-6 30S ribosomal protein S3 YP_001793012.1 4477657 R 395495 CDS YP_001793013.1 171060664 6160823 complement(4478533..4478862) 1 NC_010524.1 TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: pna:Pnap_0208 ribosomal protein L22; 50S ribosomal protein L22 4478862 6160823 Lcho_3994 Leptothrix cholodnii SP-6 50S ribosomal protein L22 YP_001793013.1 4478533 R 395495 CDS YP_001793014.1 171060665 6160824 complement(4478875..4479150) 1 NC_010524.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 4479150 rpsS 6160824 rpsS Leptothrix cholodnii SP-6 30S ribosomal protein S19 YP_001793014.1 4478875 R 395495 CDS YP_001793015.1 171060666 6160825 complement(4479169..4479993) 1 NC_010524.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 4479993 rplB 6160825 rplB Leptothrix cholodnii SP-6 50S ribosomal protein L2 YP_001793015.1 4479169 R 395495 CDS YP_001793016.1 171060667 6160826 complement(4479993..4480319) 1 NC_010524.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 4480319 rplW 6160826 rplW Leptothrix cholodnii SP-6 50S ribosomal protein L23 YP_001793016.1 4479993 R 395495 CDS YP_001793017.1 171060668 6160827 complement(4480316..4480936) 1 NC_010524.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 4480936 rplD 6160827 rplD Leptothrix cholodnii SP-6 50S ribosomal protein L4 YP_001793017.1 4480316 R 395495 CDS YP_001793018.1 171060669 6160828 complement(4480936..4481616) 1 NC_010524.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 4481616 rplC 6160828 rplC Leptothrix cholodnii SP-6 50S ribosomal protein L3 YP_001793018.1 4480936 R 395495 CDS YP_001793019.1 171060670 6161403 complement(4482192..4482914) 1 NC_010524.1 PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: mpt:Mpe_A0275 putative two component response regulator transcription regulator protein; two component Fis family transcriptional regulator 4482914 6161403 Lcho_4000 Leptothrix cholodnii SP-6 two component Fis family transcriptional regulator YP_001793019.1 4482192 R 395495 CDS YP_001793020.1 171060671 6161404 complement(4482922..4485246) 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A0274 putative two component sensor histidine kinase transcription regulator protein; histidine kinase 4485246 6161404 Lcho_4001 Leptothrix cholodnii SP-6 histidine kinase YP_001793020.1 4482922 R 395495 CDS YP_001793021.1 171060672 6161405 complement(4485274..4485843) 1 NC_010524.1 KEGG: mpt:Mpe_A0273 hypothetical protein; hypothetical protein 4485843 6161405 Lcho_4002 Leptothrix cholodnii SP-6 hypothetical protein YP_001793021.1 4485274 R 395495 CDS YP_001793022.1 171060673 6160514 complement(4486009..4487370) 1 NC_010524.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; KEGG: mpt:Mpe_A0272 Sun protein; sun protein 4487370 6160514 Lcho_4003 Leptothrix cholodnii SP-6 sun protein YP_001793022.1 4486009 R 395495 CDS YP_001793023.1 171060674 6160515 complement(4487398..4488327) 1 NC_010524.1 hypothetical protein 4488327 6160515 Lcho_4004 Leptothrix cholodnii SP-6 hypothetical protein YP_001793023.1 4487398 R 395495 CDS YP_001793024.1 171060675 6160516 complement(4488468..4489028) 1 NC_010524.1 PFAM: LemA family protein; KEGG: pna:Pnap_3638 LemA family protein; LemA family protein 4489028 6160516 Lcho_4005 Leptothrix cholodnii SP-6 LemA family protein YP_001793024.1 4488468 R 395495 CDS YP_001793025.1 171060676 6160517 complement(4489059..4489766) 1 NC_010524.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: bbr:BB0421 hypothetical protein; exsB protein 4489766 6160517 Lcho_4006 Leptothrix cholodnii SP-6 exsB protein YP_001793025.1 4489059 R 395495 CDS YP_001793026.1 171060677 6160518 complement(4489783..4491102) 1 NC_010524.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 4491102 proA 6160518 proA Leptothrix cholodnii SP-6 gamma-glutamyl phosphate reductase YP_001793026.1 4489783 R 395495 CDS YP_001793027.1 171060678 6160519 complement(4491109..4492149) 1 NC_010524.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: reh:H16_B0226 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 4492149 6160519 Lcho_4008 Leptothrix cholodnii SP-6 UDP-glucose 4-epimerase YP_001793027.1 4491109 R 395495 CDS YP_001793028.1 171060679 6160520 4492286..4492804 1 NC_010524.1 KEGG: vei:Veis_1320 hypothetical protein; hypothetical protein 4492804 6160520 Lcho_4009 Leptothrix cholodnii SP-6 hypothetical protein YP_001793028.1 4492286 D 395495 CDS YP_001793029.1 171060680 6163421 4492859..4494427 1 NC_010524.1 TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: mpt:Mpe_A1067 putative ubiquinone biosynthesis protein UbiB; 2-polyprenylphenol 6-hydroxylase 4494427 6163421 Lcho_4010 Leptothrix cholodnii SP-6 2-polyprenylphenol 6-hydroxylase YP_001793029.1 4492859 D 395495 CDS YP_001793030.1 171060681 6163422 4494546..4494872 1 NC_010524.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: rfr:Rfer_1295 hypothetical protein; FmdB family regulatory protein 4494872 6163422 Lcho_4011 Leptothrix cholodnii SP-6 FmdB family regulatory protein YP_001793030.1 4494546 D 395495 CDS YP_001793031.1 171060682 6163423 4494916..4495575 1 NC_010524.1 PFAM: protein of unknown function DUF502; KEGG: mpt:Mpe_A1069 putatives membrane protein; hypothetical protein 4495575 6163423 Lcho_4012 Leptothrix cholodnii SP-6 hypothetical protein YP_001793031.1 4494916 D 395495 CDS YP_001793032.1 171060683 6163424 4495669..4497465 1 NC_010524.1 TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mpt:Mpe_A1070 putative aspartyl-tRNA synthetase protein; aspartyl-tRNA synthetase 4497465 6163424 Lcho_4013 Leptothrix cholodnii SP-6 aspartyl-tRNA synthetase YP_001793032.1 4495669 D 395495 CDS YP_001793033.1 171060684 6163425 4497629..4498549 1 NC_010524.1 PFAM: UbiA prenyltransferase; KEGG: azo:azo3613 1,4-dihydroxy-2-naphthoate octaprenyltransferase; UbiA prenyltransferase 4498549 6163425 Lcho_4014 Leptothrix cholodnii SP-6 UbiA prenyltransferase YP_001793033.1 4497629 D 395495 CDS YP_001793034.1 171060685 6163426 4498584..4499075 1 NC_010524.1 PFAM: NUDIX hydrolase; KEGG: mpt:Mpe_A1071 putative dATP pyrophosphohydrolase; NUDIX hydrolase 4499075 6163426 Lcho_4015 Leptothrix cholodnii SP-6 NUDIX hydrolase YP_001793034.1 4498584 D 395495 CDS YP_001793035.1 171060686 6163427 4499072..4499902 1 NC_010524.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mpt:Mpe_A1072 hypothetical protein; endonuclease/exonuclease/phosphatase 4499902 6163427 Lcho_4016 Leptothrix cholodnii SP-6 endonuclease/exonuclease/phosphatase YP_001793035.1 4499072 D 395495 CDS YP_001793036.1 171060687 6163045 4499902..4501257 1 NC_010524.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: mpt:Mpe_A1073 phospholipase D/transphosphatidylase protein; phospholipase D/transphosphatidylase 4501257 6163045 Lcho_4017 Leptothrix cholodnii SP-6 phospholipase D/transphosphatidylase YP_001793036.1 4499902 D 395495 CDS YP_001793037.1 171060688 6163046 complement(4501347..4502222) 1 NC_010524.1 putative metalloprotease; heat shock protein HtpX 4502222 6163046 Lcho_4018 Leptothrix cholodnii SP-6 heat shock protein HtpX YP_001793037.1 4501347 R 395495 CDS YP_001793038.1 171060689 6163047 complement(4502417..4503076) 1 NC_010524.1 KEGG: pna:Pnap_3576 hypothetical protein; hypothetical protein 4503076 6163047 Lcho_4019 Leptothrix cholodnii SP-6 hypothetical protein YP_001793038.1 4502417 R 395495 CDS YP_001793039.1 171060690 6163048 complement(4503210..4504244) 1 NC_010524.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 4504244 6163048 Lcho_4020 Leptothrix cholodnii SP-6 dihydroorotase YP_001793039.1 4503210 R 395495 CDS YP_001793040.1 171060691 6163049 complement(4504287..4505021) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0446 putative polar amino acid transport system ATP-binding protein; ABC transporter-like protein 4505021 6163049 Lcho_4021 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001793040.1 4504287 R 395495 CDS YP_001793041.1 171060692 6163050 complement(4505034..4505699) 1 NC_010524.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A0445 amino acid permease; polar amino acid ABC transporter inner membrane subunit 4505699 6163050 Lcho_4022 Leptothrix cholodnii SP-6 polar amino acid ABC transporter inner membrane subunit YP_001793041.1 4505034 R 395495 CDS YP_001793042.1 171060693 6163051 complement(4505696..4506439) 1 NC_010524.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A0444 putative ABC transporter protein, putative glutamate/aspartate transmembrane subunit; polar amino acid ABC transporter inner membrane subunit 4506439 6163051 Lcho_4023 Leptothrix cholodnii SP-6 polar amino acid ABC transporter inner membrane subunit YP_001793042.1 4505696 R 395495 CDS YP_001793043.1 171060694 6161694 complement(4506505..4507401) 1 NC_010524.1 PFAM: extracellular solute-binding protein family 3; KEGG: aav:Aave_4073 extracellular solute-binding protein, family 3; extracellular solute-binding protein 4507401 6161694 Lcho_4024 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001793043.1 4506505 R 395495 CDS YP_001793044.1 171060695 6161695 complement(4507599..4508549) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A0442 putative transcription regulator protein; LysR family transcriptional regulator 4508549 6161695 Lcho_4025 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001793044.1 4507599 R 395495 CDS YP_001793045.1 171060696 6161696 complement(4508571..4510430) 1 NC_010524.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0439 putative composite ATP-binding transmembrane ABC transporter protein; ABC transporter-like protein 4510430 6161696 Lcho_4026 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001793045.1 4508571 R 395495 CDS YP_001793046.1 171060697 6161697 4510466..4510933 1 NC_010524.1 PFAM: thioesterase superfamily protein; KEGG: mpt:Mpe_A0438 acyl-CoA hydrolase-like protein; thioesterase superfamily protein 4510933 6161697 Lcho_4027 Leptothrix cholodnii SP-6 thioesterase superfamily protein YP_001793046.1 4510466 D 395495 CDS YP_001793047.1 171060698 6161698 complement(4510922..4511764) 1 NC_010524.1 KEGG: bch:Bcen2424_0149 hypothetical protein; hypothetical protein 4511764 6161698 Lcho_4028 Leptothrix cholodnii SP-6 hypothetical protein YP_001793047.1 4510922 R 395495 CDS YP_001793048.1 171060699 6161699 complement(4511879..4512643) 1 NC_010524.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rso:RSc0476 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 4512643 6161699 Lcho_4029 Leptothrix cholodnii SP-6 enoyl-CoA hydratase/isomerase YP_001793048.1 4511879 R 395495 CDS YP_001793049.1 171060700 6161700 complement(4512743..4513942) 1 NC_010524.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 4513942 6161700 Lcho_4030 Leptothrix cholodnii SP-6 acetyl-CoA acetyltransferase YP_001793049.1 4512743 R 395495 CDS YP_001793050.1 171060701 6164081 complement(4513957..4516362) 1 NC_010524.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: mpt:Mpe_A0417 putative 3-hydroxyacyl-CoA dehydrogenase oxidoreductase; 3-hydroxyacyl-CoA dehydrogenase 4516362 6164081 Lcho_4031 Leptothrix cholodnii SP-6 3-hydroxyacyl-CoA dehydrogenase YP_001793050.1 4513957 R 395495 CDS YP_001793051.1 171060702 6164082 complement(4516404..4518194) 1 NC_010524.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mpt:Mpe_A0419 putative acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein 4518194 6164082 Lcho_4032 Leptothrix cholodnii SP-6 acyl-CoA dehydrogenase domain-containing protein YP_001793051.1 4516404 R 395495 CDS YP_001793052.1 171060703 6164083 complement(4518275..4518934) 1 NC_010524.1 PFAM: regulatory protein TetR; KEGG: mpt:Mpe_A0420 TetR family regulatory protein; TetR family transcriptional regulator 4518934 6164083 Lcho_4033 Leptothrix cholodnii SP-6 TetR family transcriptional regulator YP_001793052.1 4518275 R 395495 CDS YP_001793053.1 171060704 6164084 4519120..4519677 1 NC_010524.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mpt:Mpe_A0423 hypothetical protein; HNH endonuclease 4519677 6164084 Lcho_4034 Leptothrix cholodnii SP-6 HNH endonuclease YP_001793053.1 4519120 D 395495 CDS YP_001793054.1 171060705 6164085 4519804..4520283 1 NC_010524.1 PFAM: 17 kDa surface antigen; KEGG: mpt:Mpe_A0424 outer membrane lipoprotein; 17 kDa surface antigen 4520283 6164085 Lcho_4035 Leptothrix cholodnii SP-6 17 kDa surface antigen YP_001793054.1 4519804 D 395495 CDS YP_001793055.1 171060706 6164086 complement(4520332..4520571) 1 NC_010524.1 KEGG: pol:Bpro_2357 hypothetical protein; hypothetical protein 4520571 6164086 Lcho_4036 Leptothrix cholodnii SP-6 hypothetical protein YP_001793055.1 4520332 R 395495 CDS YP_001793056.1 171060707 6164087 complement(4520742..4521245) 1 NC_010524.1 PFAM: Domain of unknown function DUF1854; KEGG: bpa:BPP3181 hypothetical protein; hypothetical protein 4521245 6164087 Lcho_4037 Leptothrix cholodnii SP-6 hypothetical protein YP_001793056.1 4520742 R 395495 CDS YP_001793057.1 171060708 6160545 complement(4521255..4523435) 1 NC_010524.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A1021 putative ABC transporter; ABC transporter-like protein 4523435 6160545 Lcho_4038 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001793057.1 4521255 R 395495 CDS YP_001793058.1 171060709 6160546 4523758..4525941 1 NC_010524.1 catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 4525941 6160546 Lcho_4039 Leptothrix cholodnii SP-6 cyanophycin synthetase YP_001793058.1 4523758 D 395495 CDS YP_001793059.1 171060710 6160547 4525990..4528587 1 NC_010524.1 catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 4528587 6160547 Lcho_4040 Leptothrix cholodnii SP-6 cyanophycin synthetase YP_001793059.1 4525990 D 395495 CDS YP_001793060.1 171060711 6160548 4528621..4529529 1 NC_010524.1 PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: mpt:Mpe_A1207 hypothetical protein; hypothetical protein 4529529 6160548 Lcho_4041 Leptothrix cholodnii SP-6 hypothetical protein YP_001793060.1 4528621 D 395495 CDS YP_001793061.1 171060712 6160551 complement(4530201..4532135) 1 NC_010524.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: aav:Aave_1960 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4532135 6160551 Lcho_4044 Leptothrix cholodnii SP-6 methyl-accepting chemotaxis sensory transducer YP_001793061.1 4530201 R 395495 CDS YP_001793062.1 171060713 6163232 4532324..4533043 1 NC_010524.1 KEGG: mpt:Mpe_A0319 hypothetical protein; hypothetical protein 4533043 6163232 Lcho_4045 Leptothrix cholodnii SP-6 hypothetical protein YP_001793062.1 4532324 D 395495 CDS YP_001793063.1 171060714 6163233 complement(4533056..4533556) 1 NC_010524.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mpt:Mpe_A0318 hypothetical protein; redoxin domain-containing protein 4533556 6163233 Lcho_4046 Leptothrix cholodnii SP-6 redoxin domain-containing protein YP_001793063.1 4533056 R 395495 CDS YP_001793064.1 171060715 6163234 4533768..4535240 1 NC_010524.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: mpt:Mpe_A0086 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; glutamyl-tRNA(Gln) amidotransferase subunit B 4535240 6163234 Lcho_4047 Leptothrix cholodnii SP-6 glutamyl-tRNA(Gln) amidotransferase subunit B YP_001793064.1 4533768 D 395495 CDS YP_001793065.1 171060716 6163235 complement(4535262..4535933) 1 NC_010524.1 KEGG: mpt:Mpe_A0087 hypothetical protein; hypothetical protein 4535933 6163235 Lcho_4048 Leptothrix cholodnii SP-6 hypothetical protein YP_001793065.1 4535262 R 395495 CDS YP_001793066.1 171060717 6163236 complement(4535930..4536625) 1 NC_010524.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 4536625 pyrE 6163236 pyrE Leptothrix cholodnii SP-6 orotate phosphoribosyltransferase YP_001793066.1 4535930 R 395495 CDS YP_001793067.1 171060718 6163237 4536641..4537429 1 NC_010524.1 KEGG: mpt:Mpe_A0089 DNA-(apurinic or apyrimidinic site) lyase; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth 4537429 6163237 Lcho_4050 Leptothrix cholodnii SP-6 exodeoxyribonuclease III Xth YP_001793067.1 4536641 D 395495 CDS YP_001793068.1 171060719 6163238 4537492..4538628 1 NC_010524.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: sit:TM1040_2627 protein of unknown function UPF0052 and CofD; hypothetical protein 4538628 6163238 Lcho_4051 Leptothrix cholodnii SP-6 hypothetical protein YP_001793068.1 4537492 D 395495 CDS YP_001793069.1 171060720 6162885 4538822..4539487 1 NC_010524.1 KEGG: bvi:Bcep1808_7527 hypothetical protein; hypothetical protein 4539487 6162885 Lcho_4052 Leptothrix cholodnii SP-6 hypothetical protein YP_001793069.1 4538822 D 395495 CDS YP_001793070.1 171060721 6162886 4539528..4540166 1 NC_010524.1 PFAM: beta-lactamase domain protein; KEGG: aav:Aave_0282 beta-lactamase domain protein; beta-lactamase domain-containing protein 4540166 6162886 Lcho_4053 Leptothrix cholodnii SP-6 beta-lactamase domain-containing protein YP_001793070.1 4539528 D 395495 CDS YP_001793071.1 171060722 6162887 4540240..4540833 1 NC_010524.1 KEGG: pau:PA14_00960 putative lipoprotein; hypothetical protein 4540833 6162887 Lcho_4054 Leptothrix cholodnii SP-6 hypothetical protein YP_001793071.1 4540240 D 395495 CDS YP_001793072.1 171060723 6162888 4540844..4542181 1 NC_010524.1 TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: bbr:BB0814 hypothetical protein; type VI secretion protein 4542181 6162888 Lcho_4055 Leptothrix cholodnii SP-6 type VI secretion protein YP_001793072.1 4540844 D 395495 CDS YP_001793073.1 171060724 6162889 4542212..4543594 1 NC_010524.1 TIGRFAM: type IV / VI secretion system protein, DotU family; type VI secretion system OmpA/MotB family protein; PFAM: OmpA/MotB domain protein; KEGG: azo:azo3891 hypothetical protein; hypothetical protein 4543594 6162889 Lcho_4056 Leptothrix cholodnii SP-6 hypothetical protein YP_001793073.1 4542212 D 395495 CDS YP_001793074.1 171060725 6162890 4543591..4547253 1 NC_010524.1 TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: azo:azo3890 conserved hypothetical ImcF-related protein; type VI secretion protein IcmF 4547253 6162890 Lcho_4057 Leptothrix cholodnii SP-6 type VI secretion protein IcmF YP_001793074.1 4543591 D 395495 CDS YP_001793075.1 171060726 6162891 4547278..4547973 1 NC_010524.1 KEGG: azo:azo3889 hypothetical protein; hypothetical protein 4547973 6162891 Lcho_4058 Leptothrix cholodnii SP-6 hypothetical protein YP_001793075.1 4547278 D 395495 CDS YP_001793076.1 171060727 6162594 4547985..4549958 1 NC_010524.1 SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: azo:azo3888 putative serine/threonine kinase; serine/threonine protein kinase 4549958 6162594 Lcho_4059 Leptothrix cholodnii SP-6 serine/threonine protein kinase YP_001793076.1 4547985 D 395495 CDS YP_001793077.1 171060728 6162595 4550007..4550717 1 NC_010524.1 PFAM: Peptidase M15A; KEGG: bfr:BF2347 hypothetical protein; peptidase M15A 4550717 6162595 Lcho_4060 Leptothrix cholodnii SP-6 peptidase M15A YP_001793077.1 4550007 D 395495 CDS YP_001793078.1 171060729 6162596 complement(4550724..4551104) 1 NC_010524.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: art:Arth_3251 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4551104 6162596 Lcho_4061 Leptothrix cholodnii SP-6 glyoxalase/bleomycin resistance protein/dioxygenase YP_001793078.1 4550724 R 395495 CDS YP_001793079.1 171060730 6162597 complement(4551142..4551744) 1 NC_010524.1 PFAM: OmpA/MotB domain protein; KEGG: nwi:Nwi_3028 OmpA/MotB; OmpA/MotB domain-containing protein 4551744 6162597 Lcho_4062 Leptothrix cholodnii SP-6 OmpA/MotB domain-containing protein YP_001793079.1 4551142 R 395495 CDS YP_001793080.1 171060731 6162598 complement(4551741..4552508) 1 NC_010524.1 SMART: protein phosphatase 2C domain protein; KEGG: azo:azo3885 putative phosphoprotein phosphatase; protein serine/threonine phosphatase 4552508 6162598 Lcho_4063 Leptothrix cholodnii SP-6 protein serine/threonine phosphatase YP_001793080.1 4551741 R 395495 CDS YP_001793081.1 171060732 6162599 complement(4552514..4554256) 1 NC_010524.1 TIGRFAM: type VI secretion system FHA domain protein; PFAM: Forkhead-associated protein; KEGG: azo:azo3884 hypothetical regulatory protein; FHA domain-containing protein 4554256 6162599 Lcho_4064 Leptothrix cholodnii SP-6 FHA domain-containing protein YP_001793081.1 4552514 R 395495 CDS YP_001793082.1 171060733 6162600 4554537..4555172 1 NC_010524.1 KEGG: ddi:DDB_0191488 zipper-like domain-containing protein; hypothetical protein 4555172 6162600 Lcho_4065 Leptothrix cholodnii SP-6 hypothetical protein YP_001793082.1 4554537 D 395495 CDS YP_001793083.1 171060734 6162152 complement(4555185..4556816) 1 NC_010524.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: azo:azo3908 putative serine/threonine protein kinase; serine/threonine protein kinase 4556816 6162152 Lcho_4066 Leptothrix cholodnii SP-6 serine/threonine protein kinase YP_001793083.1 4555185 R 395495 CDS YP_001793084.1 171060735 6162153 complement(4556834..4557706) 1 NC_010524.1 PFAM: histidine kinase HAMP region domain protein; KEGG: azo:azo3909 probable sensor protein; sensor protein 4557706 6162153 Lcho_4067 Leptothrix cholodnii SP-6 sensor protein YP_001793084.1 4556834 R 395495 CDS YP_001793085.1 171060736 6162154 complement(4557822..4558019) 1 NC_010524.1 hypothetical protein 4558019 6162154 Lcho_4068 Leptothrix cholodnii SP-6 hypothetical protein YP_001793085.1 4557822 R 395495 CDS YP_001793086.1 171060737 6162155 complement(4558033..4562034) 1 NC_010524.1 KEGG: azo:azo2482 putative hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 4562034 6162155 Lcho_4069 Leptothrix cholodnii SP-6 PAS/PAC sensor hybrid histidine kinase YP_001793086.1 4558033 R 395495 CDS YP_001793087.1 171060738 6162156 4562267..4563682 1 NC_010524.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 4563682 trkA 6162156 trkA Leptothrix cholodnii SP-6 potassium transporter peripheral membrane protein YP_001793087.1 4562267 D 395495 CDS YP_001793088.1 171060739 6162157 4563703..4565160 1 NC_010524.1 PFAM: cation transporter; KEGG: dac:Daci_5998 cation transporter; cation transporter 4565160 6162157 Lcho_4071 Leptothrix cholodnii SP-6 cation transporter YP_001793088.1 4563703 D 395495 CDS YP_001793089.1 171060740 6162024 complement(4565176..4566525) 1 NC_010524.1 KEGG: hch:HCH_04281 hypothetical protein; hypothetical protein 4566525 6162024 Lcho_4072 Leptothrix cholodnii SP-6 hypothetical protein YP_001793089.1 4565176 R 395495 CDS YP_001793090.1 171060741 6162025 complement(4566531..4567652) 1 NC_010524.1 KEGG: mxa:MXAN_7132 hypothetical protein; hypothetical protein 4567652 6162025 Lcho_4073 Leptothrix cholodnii SP-6 hypothetical protein YP_001793090.1 4566531 R 395495 CDS YP_001793091.1 171060742 6162026 complement(4567656..4568465) 1 NC_010524.1 KEGG: mxa:MXAN_7136 hypothetical protein; hypothetical protein 4568465 6162026 Lcho_4074 Leptothrix cholodnii SP-6 hypothetical protein YP_001793091.1 4567656 R 395495 CDS YP_001793092.1 171060743 6162027 complement(4568465..4569064) 1 NC_010524.1 KEGG: mxa:MXAN_7135 hypothetical protein; hypothetical protein 4569064 6162027 Lcho_4075 Leptothrix cholodnii SP-6 hypothetical protein YP_001793092.1 4568465 R 395495 CDS YP_001793093.1 171060744 6162028 complement(4569075..4569821) 1 NC_010524.1 hypothetical protein 4569821 6162028 Lcho_4076 Leptothrix cholodnii SP-6 hypothetical protein YP_001793093.1 4569075 R 395495 CDS YP_001793094.1 171060745 6162029 complement(4569808..4570995) 1 NC_010524.1 KEGG: mxa:MXAN_1306 hypothetical protein; hypothetical protein 4570995 6162029 Lcho_4077 Leptothrix cholodnii SP-6 hypothetical protein YP_001793094.1 4569808 R 395495 CDS YP_001793095.1 171060746 6162030 complement(4571006..4571467) 1 NC_010524.1 KEGG: mxa:MXAN_7133 hypothetical protein; hypothetical protein 4571467 6162030 Lcho_4078 Leptothrix cholodnii SP-6 hypothetical protein YP_001793095.1 4571006 R 395495 CDS YP_001793096.1 171060747 6161750 complement(4571480..4571971) 1 NC_010524.1 KEGG: hch:HCH_07060 hypothetical protein; hypothetical protein 4571971 6161750 Lcho_4079 Leptothrix cholodnii SP-6 hypothetical protein YP_001793096.1 4571480 R 395495 CDS YP_001793097.1 171060748 6161751 complement(4571976..4574291) 1 NC_010524.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; Gp5 domain protein; KEGG: pae:PA0095 hypothetical protein; ImpA family type VI secretion-associated protein 4574291 6161751 Lcho_4080 Leptothrix cholodnii SP-6 ImpA family type VI secretion-associated protein YP_001793097.1 4571976 R 395495 CDS YP_001793098.1 171060749 6161752 complement(4574388..4575758) 1 NC_010524.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 11; Methyltransferase type 12; SMART: Tetratricopeptide domain protein; KEGG: azo:azo3907 hypothetical protein; type 12 methyltransferase 4575758 6161752 Lcho_4081 Leptothrix cholodnii SP-6 type 12 methyltransferase YP_001793098.1 4574388 R 395495 CDS YP_001793099.1 171060750 6161753 complement(4575815..4576696) 1 NC_010524.1 KEGG: plu:plu0964 insecticidal toxin complex protein TccC5; hypothetical protein 4576696 6161753 Lcho_4082 Leptothrix cholodnii SP-6 hypothetical protein YP_001793099.1 4575815 R 395495 CDS YP_001793100.1 171060751 6161754 complement(4576776..4577921) 1 NC_010524.1 hypothetical protein 4577921 6161754 Lcho_4083 Leptothrix cholodnii SP-6 hypothetical protein YP_001793100.1 4576776 R 395495 CDS YP_001793101.1 171060752 6161755 complement(4577943..4580693) 1 NC_010524.1 KEGG: azo:azo3903 putative ATP-dependent Clp protease, ATP-binding subunit ClpB; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase AAA-2 domain protein; SMART: AAA ATPase; type VI secretion ATPase 4580693 6161755 Lcho_4084 Leptothrix cholodnii SP-6 type VI secretion ATPase YP_001793101.1 4577943 R 395495 CDS YP_001793102.1 171060753 6161756 complement(4580698..4581831) 1 NC_010524.1 TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: azo:azo3902 putative cytoplasmic protein, SciB; type VI secretion protein 4581831 6161756 Lcho_4085 Leptothrix cholodnii SP-6 type VI secretion protein YP_001793102.1 4580698 R 395495 CDS YP_001793103.1 171060754 6160208 complement(4581857..4583773) 1 NC_010524.1 TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: azo:azo3901 putative cytoplasmic protein, SciC; type VI secretion protein 4583773 6160208 Lcho_4086 Leptothrix cholodnii SP-6 type VI secretion protein YP_001793103.1 4581857 R 395495 CDS YP_001793104.1 171060755 6160209 complement(4583770..4584324) 1 NC_010524.1 TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: azo:azo3900 putative cytoplasmic protein, SciD; type VI secretion system lysozyme-like protein 4584324 6160209 Lcho_4087 Leptothrix cholodnii SP-6 type VI secretion system lysozyme-like protein YP_001793104.1 4583770 R 395495 CDS YP_001793105.1 171060756 6160210 complement(4584347..4584871) 1 NC_010524.1 TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: azo:azo3898 putative cytoplasmic protein,SciK; Hcp1 family type VI secretion system effector 4584871 6160210 Lcho_4088 Leptothrix cholodnii SP-6 Hcp1 family type VI secretion system effector YP_001793105.1 4584347 R 395495 CDS YP_001793106.1 171060757 6160211 complement(4584916..4585401) 1 NC_010524.1 PFAM: protein of unknown function DUF796; KEGG: azo:azo3897 putative cytoplasmic protein,SciM; hypothetical protein 4585401 6160211 Lcho_4089 Leptothrix cholodnii SP-6 hypothetical protein YP_001793106.1 4584916 R 395495 CDS YP_001793107.1 171060758 6160212 complement(4585545..4587041) 1 NC_010524.1 TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: azo:azo3896 putative cytoplasmic protein, SciI; EvpB family type VI secretion protein 4587041 6160212 Lcho_4090 Leptothrix cholodnii SP-6 EvpB family type VI secretion protein YP_001793107.1 4585545 R 395495 CDS YP_001793108.1 171060759 6160213 complement(4587063..4587569) 1 NC_010524.1 TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: azo:azo3895 putative cytoplasmic protein,SciH; type VI secretion protein 4587569 6160213 Lcho_4091 Leptothrix cholodnii SP-6 type VI secretion protein YP_001793108.1 4587063 R 395495 CDS YP_001793109.1 171060760 6160214 complement(4587619..4588656) 1 NC_010524.1 TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein; KEGG: xcv:XCV4202 hypothetical protein; ImpA family type VI secretion-associated protein 4588656 6160214 Lcho_4092 Leptothrix cholodnii SP-6 ImpA family type VI secretion-associated protein YP_001793109.1 4587619 R 395495 CDS YP_001793110.1 171060761 6159941 complement(4588782..4591622) 1 NC_010524.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; KEGG: xac:XAC4113 YapH protein; filamentous hemagglutinin outer membrane protein 4591622 6159941 Lcho_4093 Leptothrix cholodnii SP-6 filamentous hemagglutinin outer membrane protein YP_001793110.1 4588782 R 395495 CDS YP_001793111.1 171060762 6159942 complement(4591633..4593270) 1 NC_010524.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: pna:Pnap_3704 polypeptide-transport-associated domain protein, ShlB-type; polypeptide-transport-associated domain-containing protein 4593270 6159942 Lcho_4094 Leptothrix cholodnii SP-6 polypeptide-transport-associated domain-containing protein YP_001793111.1 4591633 R 395495 CDS YP_001793112.1 171060763 6159943 complement(4593267..4595456) 1 NC_010524.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sus:Acid_6889 tetratricopeptide TPR_2 repeat protein; hypothetical protein 4595456 6159943 Lcho_4095 Leptothrix cholodnii SP-6 hypothetical protein YP_001793112.1 4593267 R 395495 CDS YP_001793113.1 171060764 6159944 complement(4595569..4597383) 1 NC_010524.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A1150 signal transduction histidine kinase-like protein; histidine kinase 4597383 6159944 Lcho_4096 Leptothrix cholodnii SP-6 histidine kinase YP_001793113.1 4595569 R 395495 CDS YP_001793114.1 171060765 6159945 complement(4597388..4598107) 1 NC_010524.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rfr:Rfer_2039 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 4598107 6159945 Lcho_4097 Leptothrix cholodnii SP-6 two component LuxR family transcriptional regulator YP_001793114.1 4597388 R 395495 CDS YP_001793115.1 171060766 6159946 4598436..4599083 1 NC_010524.1 PFAM: regulatory protein LuxR; KEGG: pol:Bpro_4220 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 4599083 6159946 Lcho_4098 Leptothrix cholodnii SP-6 LuxR family transcriptional regulator YP_001793115.1 4598436 D 395495 CDS YP_001793116.1 171060767 6159947 4599129..4599842 1 NC_010524.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: pol:Bpro_4219 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 4599842 6159947 Lcho_4099 Leptothrix cholodnii SP-6 Crp/FNR family transcriptional regulator YP_001793116.1 4599129 D 395495 CDS YP_001793117.1 171060768 6160058 4599893..4604026 1 NC_010524.1 PFAM: Tetratricopeptide TPR_4; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: bbt:BBta_6648 putative adenylate cyclase; hypothetical protein 4604026 6160058 Lcho_4100 Leptothrix cholodnii SP-6 hypothetical protein YP_001793117.1 4599893 D 395495 CDS YP_001793118.1 171060769 6160059 4603978..4605924 1 NC_010524.1 KEGG: dra:DR_A0144 hypothetical protein; hypothetical protein 4605924 6160059 Lcho_4101 Leptothrix cholodnii SP-6 hypothetical protein YP_001793118.1 4603978 D 395495 CDS YP_001793119.1 171060770 6160060 4605921..4607405 1 NC_010524.1 KEGG: sma:SAV3599 peroxidase; peroxidase 4607405 6160060 Lcho_4102 Leptothrix cholodnii SP-6 peroxidase YP_001793119.1 4605921 D 395495 CDS YP_001793120.1 171060771 6160061 4607402..4609459 1 NC_010524.1 PFAM: Patatin; KEGG: pmy:Pmen_2024 patatin; patatin 4609459 6160061 Lcho_4103 Leptothrix cholodnii SP-6 patatin YP_001793120.1 4607402 D 395495 CDS YP_001793121.1 171060772 6160062 complement(4609533..4610483) 1 NC_010524.1 PFAM: peptidase M48 Ste24p; KEGG: mpt:Mpe_A0093 conserved hypothetical signal peptide protein; peptidase M48 Ste24p 4610483 6160062 Lcho_4104 Leptothrix cholodnii SP-6 peptidase M48 Ste24p YP_001793121.1 4609533 R 395495 CDS YP_001793122.1 171060773 6160063 complement(4610539..4612182) 1 NC_010524.1 PFAM: major facilitator superfamily MFS_1; KEGG: azo:azo3975 putative AmpG protein; major facilitator transporter 4612182 6160063 Lcho_4105 Leptothrix cholodnii SP-6 major facilitator transporter YP_001793122.1 4610539 R 395495 CDS YP_001793123.1 171060774 6160064 4612249..4612761 1 NC_010524.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: mpt:Mpe_A3697 hypothetical protein; flavin reductase domain-containing protein 4612761 6160064 Lcho_4106 Leptothrix cholodnii SP-6 flavin reductase domain-containing protein YP_001793123.1 4612249 D 395495 CDS YP_001793124.1 171060775 6160658 4612860..4613285 1 NC_010524.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: tbd:Tbd_2401 thioredoxin; thioredoxin 4613285 6160658 Lcho_4107 Leptothrix cholodnii SP-6 thioredoxin YP_001793124.1 4612860 D 395495 CDS YP_001793125.1 171060776 6160659 complement(4613254..4614108) 1 NC_010524.1 type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 4614108 pyrF 6160659 pyrF Leptothrix cholodnii SP-6 orotidine 5'-phosphate decarboxylase YP_001793125.1 4613254 R 395495 CDS YP_001793126.1 171060777 6160660 complement(4614131..4614772) 1 NC_010524.1 KEGG: cau:Caur_0819 hypothetical protein; hypothetical protein 4614772 6160660 Lcho_4109 Leptothrix cholodnii SP-6 hypothetical protein YP_001793126.1 4614131 R 395495 CDS YP_001793127.1 171060778 6160661 complement(4614769..4616052) 1 NC_010524.1 KEGG: cau:Caur_0818 ATPase-like protein; ATPase-like protein 4616052 6160661 Lcho_4110 Leptothrix cholodnii SP-6 ATPase-like protein YP_001793127.1 4614769 R 395495 CDS YP_001793128.1 171060779 6160662 complement(4616077..4617450) 1 NC_010524.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 4617450 6160662 Lcho_4111 Leptothrix cholodnii SP-6 adenylosuccinate lyase YP_001793128.1 4616077 R 395495 CDS YP_001793129.1 171060780 6160663 complement(4617532..4617930) 1 NC_010524.1 hypothetical protein 4617930 6160663 Lcho_4112 Leptothrix cholodnii SP-6 hypothetical protein YP_001793129.1 4617532 R 395495 CDS YP_001793130.1 171060781 6160664 complement(4618081..4620486) 1 NC_010524.1 KEGG: ava:Ava_1029 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 4620486 6160664 Lcho_4113 Leptothrix cholodnii SP-6 multi-sensor hybrid histidine kinase YP_001793130.1 4618081 R 395495 CDS YP_001793131.1 171060782 6163008 complement(4620510..4621643) 1 NC_010524.1 KEGG: sus:Acid_2684 histidine kinase; two component regulator propeller domain-containing protein 4621643 6163008 Lcho_4114 Leptothrix cholodnii SP-6 two component regulator propeller domain-containing protein YP_001793131.1 4620510 R 395495 CDS YP_001793132.1 171060783 6163009 complement(4621676..4622749) 1 NC_010524.1 PFAM: Two component regulator propeller; KEGG: mxa:MXAN_7206 sensor histidine kinase/response regulator; two component regulator propeller domain-containing protein 4622749 6163009 Lcho_4115 Leptothrix cholodnii SP-6 two component regulator propeller domain-containing protein YP_001793132.1 4621676 R 395495 CDS YP_001793133.1 171060784 6163010 complement(4622746..4623120) 1 NC_010524.1 PFAM: cytochrome c class I; KEGG: syx:SynWH7803_0752 cytochrome c6; cytochrome c class I 4623120 6163010 Lcho_4116 Leptothrix cholodnii SP-6 cytochrome c class I YP_001793133.1 4622746 R 395495 CDS YP_001793134.1 171060785 6163011 complement(4623181..4624578) 1 NC_010524.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rfr:Rfer_0247 two component, sigma54 specific, transcriptional regulator, fis family; two component sigma-54 specific Fis family transcriptional regulator 4624578 6163011 Lcho_4117 Leptothrix cholodnii SP-6 two component sigma-54 specific Fis family transcriptional regulator YP_001793134.1 4623181 R 395495 CDS YP_001793135.1 171060786 6163012 complement(4624594..4626087) 1 NC_010524.1 PFAM: histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rfr:Rfer_0246 histidine kinase; sensor protein 4626087 6163012 Lcho_4118 Leptothrix cholodnii SP-6 sensor protein YP_001793135.1 4624594 R 395495 CDS YP_001793136.1 171060787 6163013 4626166..4626693 1 NC_010524.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: hip:CGSHiEE_05405 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 4626693 6163013 Lcho_4119 Leptothrix cholodnii SP-6 Sel1 domain-containing protein YP_001793136.1 4626166 D 395495 CDS YP_001793137.1 171060788 6161602 complement(4626775..4627374) 1 NC_010524.1 PFAM: TPR repeat-containing protein; KEGG: cpt:CpB0720 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase; hypothetical protein 4627374 6161602 Lcho_4120 Leptothrix cholodnii SP-6 hypothetical protein YP_001793137.1 4626775 R 395495 CDS YP_001793138.1 171060789 6161603 complement(4627371..4628195) 1 NC_010524.1 PFAM: cytochrome c assembly protein; KEGG: gsu:GSU0705 cytochrome c biogenesis protein, CcmF/CcyK/CcsA family; cytochrome c assembly protein 4628195 6161603 Lcho_4121 Leptothrix cholodnii SP-6 cytochrome c assembly protein YP_001793138.1 4627371 R 395495 CDS YP_001793139.1 171060790 6161604 complement(4628188..4629222) 1 NC_010524.1 KEGG: nca:Noca_2201 ResB family protein; hypothetical protein 4629222 6161604 Lcho_4122 Leptothrix cholodnii SP-6 hypothetical protein YP_001793139.1 4628188 R 395495 CDS YP_001793140.1 171060791 6161605 complement(4629219..4631822) 1 NC_010524.1 KEGG: rfr:Rfer_0259 hypothetical protein; hypothetical protein 4631822 6161605 Lcho_4123 Leptothrix cholodnii SP-6 hypothetical protein YP_001793140.1 4629219 R 395495 CDS YP_001793141.1 171060792 6161606 complement(4631822..4632901) 1 NC_010524.1 PFAM: NHL repeat containing protein; KEGG: gsu:GSU3225 NHL repeat domain protein; NHL repeat-containing protein 4632901 6161606 Lcho_4124 Leptothrix cholodnii SP-6 NHL repeat-containing protein YP_001793141.1 4631822 R 395495 CDS YP_001793142.1 171060793 6161607 complement(4632928..4633947) 1 NC_010524.1 PFAM: NHL repeat containing protein; KEGG: afw:Anae109_1838 NHL repeat containing protein; NHL repeat-containing protein 4633947 6161607 Lcho_4125 Leptothrix cholodnii SP-6 NHL repeat-containing protein YP_001793142.1 4632928 R 395495 CDS YP_001793143.1 171060794 6161608 complement(4633968..4634360) 1 NC_010524.1 KEGG: gur:Gura_2745 hypothetical protein; hypothetical protein 4634360 6161608 Lcho_4126 Leptothrix cholodnii SP-6 hypothetical protein YP_001793143.1 4633968 R 395495 CDS YP_001793144.1 171060795 6163756 complement(4634357..4634956) 1 NC_010524.1 KEGG: gur:Gura_3254 hypothetical protein; hypothetical protein 4634956 6163756 Lcho_4127 Leptothrix cholodnii SP-6 hypothetical protein YP_001793144.1 4634357 R 395495 CDS YP_001793145.1 171060796 6163757 complement(4634966..4635865) 1 NC_010524.1 PFAM: Tetratricopeptide TPR_4; KEGG: tcr:506401.190 hypothetical protein Pfam: Myosin_tail_1 FliD_C Nnf1 DUF593 PROSITE: GLU_RICH; hypothetical protein 4635865 6163757 Lcho_4128 Leptothrix cholodnii SP-6 hypothetical protein YP_001793145.1 4634966 R 395495 CDS YP_001793146.1 171060797 6163758 complement(4635862..4636758) 1 NC_010524.1 PFAM: Tetratricopeptide TPR_4; KEGG: ade:Adeh_1603 lytic transglycosylase; hypothetical protein 4636758 6163758 Lcho_4129 Leptothrix cholodnii SP-6 hypothetical protein YP_001793146.1 4635862 R 395495 CDS YP_001793147.1 171060798 6163759 complement(4636755..4637807) 1 NC_010524.1 PFAM: cytochrome c class I; KEGG: bbr:BB4582 putative cytochrome c; cytochrome c class I 4637807 6163759 Lcho_4130 Leptothrix cholodnii SP-6 cytochrome c class I YP_001793147.1 4636755 R 395495 CDS YP_001793148.1 171060799 6163760 complement(4637818..4638300) 1 NC_010524.1 KEGG: gur:Gura_2745 hypothetical protein; hypothetical protein 4638300 6163760 Lcho_4131 Leptothrix cholodnii SP-6 hypothetical protein YP_001793148.1 4637818 R 395495 CDS YP_001793149.1 171060800 6163761 complement(4638361..4640316) 1 NC_010524.1 hypothetical protein 4640316 6163761 Lcho_4132 Leptothrix cholodnii SP-6 hypothetical protein YP_001793149.1 4638361 R 395495 CDS YP_001793150.1 171060801 6163762 complement(4640357..4641436) 1 NC_010524.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mxa:MXAN_0469 putative foldase protein PrsA; PpiC-type peptidyl-prolyl cis-trans isomerase 4641436 6163762 Lcho_4133 Leptothrix cholodnii SP-6 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001793150.1 4640357 R 395495 CDS YP_001793151.1 171060802 6163795 complement(4641445..4642329) 1 NC_010524.1 KEGG: gsu:GSU0618 cytochrome c family protein; cytochrome c family protein 4642329 6163795 Lcho_4134 Leptothrix cholodnii SP-6 cytochrome c family protein YP_001793151.1 4641445 R 395495 CDS YP_001793152.1 171060803 6163796 complement(4642557..4643663) 1 NC_010524.1 PFAM: NHL repeat containing protein; KEGG: gme:Gmet_1869 NHL repeat protein; NHL repeat-containing protein 4643663 6163796 Lcho_4135 Leptothrix cholodnii SP-6 NHL repeat-containing protein YP_001793152.1 4642557 R 395495 CDS YP_001793153.1 171060804 6163797 4643685..4644545 1 NC_010524.1 PFAM: cytochrome c class I; KEGG: sus:Acid_3506 hypothetical protein; cytochrome c class I 4644545 6163797 Lcho_4136 Leptothrix cholodnii SP-6 cytochrome c class I YP_001793153.1 4643685 D 395495 CDS YP_001793154.1 171060805 6163798 4644587..4645549 1 NC_010524.1 PFAM: cytochrome c class I; KEGG: rme:Rmet_6106 putative high-affinity Fe2+/Pb2+ permease; cytochrome c class I 4645549 6163798 Lcho_4137 Leptothrix cholodnii SP-6 cytochrome c class I YP_001793154.1 4644587 D 395495 CDS YP_001793155.1 171060806 6163799 4645763..4646236 1 NC_010524.1 hypothetical protein 4646236 6163799 Lcho_4138 Leptothrix cholodnii SP-6 hypothetical protein YP_001793155.1 4645763 D 395495 CDS YP_001793156.1 171060807 6163800 complement(4646332..4647261) 1 NC_010524.1 PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: rca:Rcas_2653 response regulator receiver and SARP domain protein; SARP family transcriptional regulator 4647261 6163800 Lcho_4139 Leptothrix cholodnii SP-6 SARP family transcriptional regulator YP_001793156.1 4646332 R 395495 CDS YP_001793157.1 171060808 6163801 complement(4647394..4648125) 1 NC_010524.1 PFAM: cyclic nucleotide-binding; KEGG: dac:Daci_5739 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 4648125 6163801 Lcho_4140 Leptothrix cholodnii SP-6 cyclic nucleotide-binding protein YP_001793157.1 4647394 R 395495 CDS YP_001793158.1 171060809 6164117 complement(4648152..4649279) 1 NC_010524.1 KEGG: mpt:Mpe_A0562 serine-pyruvate aminotransferase; serine-pyruvate aminotransferase 4649279 6164117 Lcho_4141 Leptothrix cholodnii SP-6 serine-pyruvate aminotransferase YP_001793158.1 4648152 R 395495 CDS YP_001793159.1 171060810 6164118 complement(4649412..4649882) 1 NC_010524.1 KEGG: ajs:Ajs_3366 integron integrase; integron integrase 4649882 6164118 Lcho_4142 Leptothrix cholodnii SP-6 integron integrase YP_001793159.1 4649412 R 395495 CDS YP_001793160.1 171060811 6164119 complement(4650053..4650940) 1 NC_010524.1 PFAM: Integrase catalytic region; KEGG: pol:Bpro_4706 integrase, catalytic region; integrase catalytic subunit 4650940 6164119 Lcho_4143 Leptothrix cholodnii SP-6 integrase catalytic subunit YP_001793160.1 4650053 R 395495 CDS YP_001793161.1 171060812 6164120 complement(4650937..4651236) 1 NC_010524.1 PFAM: transposase IS3/IS911 family protein; KEGG: pol:Bpro_4705 hypothetical protein; transposase IS3/IS911 family protein 4651236 6164120 Lcho_4144 Leptothrix cholodnii SP-6 transposase IS3/IS911 family protein YP_001793161.1 4650937 R 395495 CDS YP_001793162.1 171060813 6164121 4651908..4652888 1 NC_010524.1 hypothetical protein 4652888 6164121 Lcho_4145 Leptothrix cholodnii SP-6 hypothetical protein YP_001793162.1 4651908 D 395495 CDS YP_001793163.1 171060814 6164122 4653151..4653306 1 NC_010524.1 hypothetical protein 4653306 6164122 Lcho_4146 Leptothrix cholodnii SP-6 hypothetical protein YP_001793163.1 4653151 D 395495 CDS YP_001793164.1 171060815 6164123 4654283..4654783 1 NC_010524.1 KEGG: vvy:VV1883 hypothetical protein; hypothetical protein 4654783 6164123 Lcho_4147 Leptothrix cholodnii SP-6 hypothetical protein YP_001793164.1 4654283 D 395495 CDS YP_001793165.1 171060816 6164046 4654808..4655101 1 NC_010524.1 hypothetical protein 4655101 6164046 Lcho_4148 Leptothrix cholodnii SP-6 hypothetical protein YP_001793165.1 4654808 D 395495 CDS YP_001793166.1 171060817 6164047 4655391..4655555 1 NC_010524.1 KEGG: aav:Aave_4358 transposition helper protein; transposition helper protein 4655555 6164047 Lcho_4149 Leptothrix cholodnii SP-6 transposition helper protein YP_001793166.1 4655391 D 395495 CDS YP_001793167.1 171060818 6164048 4655613..4656104 1 NC_010524.1 PFAM: transposase IS3/IS911 family protein; KEGG: bpt:Bpet4600 putative transposase; transposase IS3/IS911 family protein 4656104 6164048 Lcho_4150 Leptothrix cholodnii SP-6 transposase IS3/IS911 family protein YP_001793167.1 4655613 D 395495 CDS YP_001793168.1 171060819 6164049 4656101..4657144 1 NC_010524.1 PFAM: Integrase catalytic region; KEGG: sbl:Sbal_4350 integrase, catalytic region; integrase catalytic subunit 4657144 6164049 Lcho_4151 Leptothrix cholodnii SP-6 integrase catalytic subunit YP_001793168.1 4656101 D 395495 CDS YP_001793169.1 171060820 6164050 4657232..4657516 1 NC_010524.1 KEGG: aav:Aave_4358 transposition helper protein; transposition helper protein 4657516 6164050 Lcho_4152 Leptothrix cholodnii SP-6 transposition helper protein YP_001793169.1 4657232 D 395495 CDS YP_001793170.1 171060821 6164051 4657513..4658604 1 NC_010524.1 PFAM: Integrase catalytic region; KEGG: aav:Aave_3792 integrase, catalytic region; integrase catalytic subunit 4658604 6164051 Lcho_4153 Leptothrix cholodnii SP-6 integrase catalytic subunit YP_001793170.1 4657513 D 395495 CDS YP_001793171.1 171060822 6161158 complement(4659368..4659898) 1 NC_010524.1 PFAM: UspA domain protein; KEGG: pol:Bpro_2222 UspA; UspA domain-containing protein 4659898 6161158 Lcho_4155 Leptothrix cholodnii SP-6 UspA domain-containing protein YP_001793171.1 4659368 R 395495 CDS YP_001793172.1 171060823 6161159 complement(4659895..4660866) 1 NC_010524.1 PFAM: Integral membrane protein TerC; KEGG: pfo:Pfl_3259 integral membrane protein TerC; integral membrane protein TerC 4660866 6161159 Lcho_4156 Leptothrix cholodnii SP-6 integral membrane protein TerC YP_001793172.1 4659895 R 395495 CDS YP_001793173.1 171060824 6161160 complement(4660877..4661383) 1 NC_010524.1 KEGG: har:HEAR0214 putative universal stress protein UspA; putative universal stress protein UspA 4661383 6161160 Lcho_4157 Leptothrix cholodnii SP-6 putative universal stress protein UspA YP_001793173.1 4660877 R 395495 CDS YP_001793174.1 171060825 6161161 4661533..4662462 1 NC_010524.1 PFAM: regulatory protein LysR; KEGG: rfr:Rfer_3458 transcriptional regulator, LysR family; LysR family transcriptional regulator 4662462 6161161 Lcho_4158 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001793174.1 4661533 D 395495 CDS YP_001793175.1 171060826 6161162 4662561..4663448 1 NC_010524.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: afw:Anae109_0604 activator of HSP90 ATPase 1 family protein; activator of Hsp90 ATPase 1 family protein 4663448 6161162 Lcho_4159 Leptothrix cholodnii SP-6 activator of Hsp90 ATPase 1 family protein YP_001793175.1 4662561 D 395495 CDS YP_001793176.1 171060827 6161163 4663464..4663919 1 NC_010524.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: psa:PST_3589 glyoxylase I family protein; glyoxalase/bleomycin resistance protein/dioxygenase 4663919 6161163 Lcho_4160 Leptothrix cholodnii SP-6 glyoxalase/bleomycin resistance protein/dioxygenase YP_001793176.1 4663464 D 395495 CDS YP_001793177.1 171060828 6161164 4663916..4664308 1 NC_010524.1 PFAM: Domain of unknown function DUF1801; KEGG: cph:Cpha266_1691 hypothetical protein; hypothetical protein 4664308 6161164 Lcho_4161 Leptothrix cholodnii SP-6 hypothetical protein YP_001793177.1 4663916 D 395495 CDS YP_001793178.1 171060829 6162699 complement(4664319..4664510) 1 NC_010524.1 hypothetical protein 4664510 6162699 Lcho_4162 Leptothrix cholodnii SP-6 hypothetical protein YP_001793178.1 4664319 R 395495 CDS YP_001793179.1 171060830 6162700 4664630..4665040 1 NC_010524.1 KEGG: tbd:Tbd_1198 hypothetical protein; hypothetical protein 4665040 6162700 Lcho_4163 Leptothrix cholodnii SP-6 hypothetical protein YP_001793179.1 4664630 D 395495 CDS YP_001793180.1 171060831 6162701 complement(4665071..4666003) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A0157 putative LysR-family regulatory protein; LysR family transcriptional regulator 4666003 6162701 Lcho_4164 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001793180.1 4665071 R 395495 CDS YP_001793181.1 171060832 6162702 4666101..4666820 1 NC_010524.1 KEGG: mpt:Mpe_A0158 2-haloacid dehalogenase; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; haloacid dehalogenase 4666820 6162702 Lcho_4165 Leptothrix cholodnii SP-6 haloacid dehalogenase YP_001793181.1 4666101 D 395495 CDS YP_001793182.1 171060833 6162703 4666887..4669091 1 NC_010524.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 4669091 6162703 Lcho_4166 Leptothrix cholodnii SP-6 malate synthase G YP_001793182.1 4666887 D 395495 CDS YP_001793183.1 171060834 6162704 complement(4669138..4671876) 1 NC_010524.1 PFAM: type III restriction protein res subunit; KEGG: neu:NE2306 hypothetical protein; type III restriction protein res subunit 4671876 6162704 Lcho_4167 Leptothrix cholodnii SP-6 type III restriction protein res subunit YP_001793183.1 4669138 R 395495 CDS YP_001793184.1 171060835 6162705 complement(4671873..4672973) 1 NC_010524.1 KEGG: amt:Amet_3301 hypothetical protein; hypothetical protein 4672973 6162705 Lcho_4168 Leptothrix cholodnii SP-6 hypothetical protein YP_001793184.1 4671873 R 395495 CDS YP_001793185.1 171060836 6162397 complement(4672970..4674631) 1 NC_010524.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: neu:NE2309 adenine specific DNA methylase Mod; DNA methylase N-4/N-6 domain-containing protein 4674631 6162397 Lcho_4169 Leptothrix cholodnii SP-6 DNA methylase N-4/N-6 domain-containing protein YP_001793185.1 4672970 R 395495 CDS YP_001793186.1 171060837 6162398 complement(4674642..4676357) 1 NC_010524.1 KEGG: tbd:Tbd_0934 hypothetical protein; hypothetical protein 4676357 6162398 Lcho_4170 Leptothrix cholodnii SP-6 hypothetical protein YP_001793186.1 4674642 R 395495 CDS YP_001793187.1 171060838 6162399 complement(4676357..4679200) 1 NC_010524.1 PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: eba:ebA2413 helicase (SNF2 family); helicase domain-containing protein 4679200 6162399 Lcho_4171 Leptothrix cholodnii SP-6 helicase domain-containing protein YP_001793187.1 4676357 R 395495 CDS YP_001793188.1 171060839 6162400 complement(4679313..4679690) 1 NC_010524.1 KEGG: aav:Aave_2031 hypothetical protein; hypothetical protein 4679690 6162400 Lcho_4172 Leptothrix cholodnii SP-6 hypothetical protein YP_001793188.1 4679313 R 395495 CDS YP_001793189.1 171060840 6162401 4679798..4681000 1 NC_010524.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mms:mma_3324 drug resistance MFS transporter, Bcr/CflA family; Bcr/CflA subfamily drug resistance transporter 4681000 6162401 Lcho_4173 Leptothrix cholodnii SP-6 Bcr/CflA subfamily drug resistance transporter YP_001793189.1 4679798 D 395495 CDS YP_001793190.1 171060841 6162402 4681031..4681342 1 NC_010524.1 KEGG: aav:Aave_1245 hypothetical protein; hypothetical protein 4681342 6162402 Lcho_4174 Leptothrix cholodnii SP-6 hypothetical protein YP_001793190.1 4681031 D 395495 CDS YP_001793191.1 171060842 6162227 complement(4681343..4684594) 1 NC_010524.1 KEGG: eba:ebA6472 putative response regulator receiver; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 4684594 6162227 Lcho_4175 Leptothrix cholodnii SP-6 response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001793191.1 4681343 R 395495 CDS YP_001793192.1 171060843 6162228 complement(4684615..4685001) 1 NC_010524.1 PFAM: response regulator receiver; KEGG: azo:azo1491 probable polar differentiation response regulator; response regulator receiver protein 4685001 6162228 Lcho_4176 Leptothrix cholodnii SP-6 response regulator receiver protein YP_001793192.1 4684615 R 395495 CDS YP_001793193.1 171060844 6162229 complement(4685004..4686476) 1 NC_010524.1 KEGG: eba:ebA6478 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 4686476 6162229 Lcho_4177 Leptothrix cholodnii SP-6 PAS/PAC sensor signal transduction histidine kinase YP_001793193.1 4685004 R 395495 CDS YP_001793194.1 171060845 6162230 complement(4686624..4687313) 1 NC_010524.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: mpt:Mpe_A2050 outer membrane protein; OmpA/MotB domain-containing protein 4687313 6162230 Lcho_4178 Leptothrix cholodnii SP-6 OmpA/MotB domain-containing protein YP_001793194.1 4686624 R 395495 CDS YP_001793195.1 171060846 6162231 complement(4687483..4688457) 1 NC_010524.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mpt:Mpe_A0213 putative 2-hydroxyacid dehydrogenase in PhoH-CsgG intergenic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 4688457 6162231 Lcho_4179 Leptothrix cholodnii SP-6 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_001793195.1 4687483 R 395495 CDS YP_001793196.1 171060847 6162232 4688500..4689822 1 NC_010524.1 PFAM: putative RNA methylase; THUMP domain protein; KEGG: ajs:Ajs_0350 putative RNA methylase; putative RNA methylase 4689822 6162232 Lcho_4180 Leptothrix cholodnii SP-6 putative RNA methylase YP_001793196.1 4688500 D 395495 CDS YP_001793197.1 171060848 6162233 4689913..4690245 1 NC_010524.1 PFAM: protein of unknown function DUF1508; KEGG: ecx:EcHS_A2222 hypothetical protein; hypothetical protein 4690245 6162233 Lcho_4181 Leptothrix cholodnii SP-6 hypothetical protein YP_001793197.1 4689913 D 395495 CDS YP_001793198.1 171060849 6162121 complement(4690250..4690684) 1 NC_010524.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pol:Bpro_0156 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4690684 6162121 Lcho_4182 Leptothrix cholodnii SP-6 glyoxalase/bleomycin resistance protein/dioxygenase YP_001793198.1 4690250 R 395495 CDS YP_001793199.1 171060850 6162122 complement(4690722..4692200) 1 NC_010524.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: gsu:GSU0018 transcriptional regulator, GntR family/aminotransferase class-I; transcriptional regulator 4692200 6162122 Lcho_4183 Leptothrix cholodnii SP-6 transcriptional regulator YP_001793199.1 4690722 R 395495 CDS YP_001793200.1 171060851 6162123 4692352..4692690 1 NC_010524.1 hypothetical protein 4692690 6162123 Lcho_4184 Leptothrix cholodnii SP-6 hypothetical protein YP_001793200.1 4692352 D 395495 CDS YP_001793201.1 171060852 6162124 4692741..4693466 1 NC_010524.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mpt:Mpe_A3042 ribosomal small subunit pseudouridine synthase A protein; pseudouridine synthase 4693466 6162124 Lcho_4185 Leptothrix cholodnii SP-6 pseudouridine synthase YP_001793201.1 4692741 D 395495 CDS YP_001793202.1 171060853 6162125 complement(4693411..4693779) 1 NC_010524.1 hypothetical protein 4693779 6162125 Lcho_4186 Leptothrix cholodnii SP-6 hypothetical protein YP_001793202.1 4693411 R 395495 CDS YP_001793203.1 171060854 6162126 complement(4693870..4694427) 1 NC_010524.1 KEGG: pol:Bpro_0398 hypothetical protein; hypothetical protein 4694427 6162126 Lcho_4187 Leptothrix cholodnii SP-6 hypothetical protein YP_001793203.1 4693870 R 395495 CDS YP_001793204.1 171060855 6162127 4694601..4695059 1 NC_010524.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bmu:Bmul_5046 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 4695059 6162127 Lcho_4188 Leptothrix cholodnii SP-6 carboxymuconolactone decarboxylase YP_001793204.1 4694601 D 395495 CDS YP_001793205.1 171060856 6160810 4695137..4695559 1 NC_010524.1 KEGG: dar:Daro_1853 hypothetical protein; hypothetical protein 4695559 6160810 Lcho_4189 Leptothrix cholodnii SP-6 hypothetical protein YP_001793205.1 4695137 D 395495 CDS YP_001793206.1 171060857 6160811 complement(4695666..4695998) 1 NC_010524.1 KEGG: rca:Rcas_0081 hypothetical protein; hypothetical protein 4695998 6160811 Lcho_4190 Leptothrix cholodnii SP-6 hypothetical protein YP_001793206.1 4695666 R 395495 CDS YP_001793207.1 171060858 6160812 complement(4695995..4696225) 1 NC_010524.1 PFAM: protein of unknown function DUF433; KEGG: ava:Ava_1741 protein of unknown function DUF433; hypothetical protein 4696225 6160812 Lcho_4191 Leptothrix cholodnii SP-6 hypothetical protein YP_001793207.1 4695995 R 395495 CDS YP_001793208.1 171060859 6160813 complement(4696258..4702065) 1 NC_010524.1 KEGG: mpt:Mpe_A3346 putative excinuclease ABC subunit A (DNA repair ATP-binding) ABC transporter protein; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase; excinuclease ABC subunit A 4702065 6160813 Lcho_4192 Leptothrix cholodnii SP-6 excinuclease ABC subunit A YP_001793208.1 4696258 R 395495 CDS YP_001793209.1 171060860 6160814 complement(4702369..4702557) 1 NC_010524.1 KEGG: bmu:Bmul_2476 protein of unknown function UPF0153; hypothetical protein 4702557 6160814 Lcho_4193 Leptothrix cholodnii SP-6 hypothetical protein YP_001793209.1 4702369 R 395495 CDS YP_001793210.1 171060861 6160815 4702704..4703369 1 NC_010524.1 TIGRFAM: yecA family protein; KEGG: bvi:Bcep1808_2979 YecA family protein; yecA family protein 4703369 6160815 Lcho_4194 Leptothrix cholodnii SP-6 yecA family protein YP_001793210.1 4702704 D 395495 CDS YP_001793211.1 171060862 6160816 4703366..4703893 1 NC_010524.1 PFAM: protein of unknown function DUF45; KEGG: mpt:Mpe_A1039 hypothetical protein; hypothetical protein 4703893 6160816 Lcho_4195 Leptothrix cholodnii SP-6 hypothetical protein YP_001793211.1 4703366 D 395495 CDS YP_001793212.1 171060863 6161381 4704139..4706196 1 NC_010524.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 4706196 6161381 Lcho_4196 Leptothrix cholodnii SP-6 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_001793212.1 4704139 D 395495 CDS YP_001793213.1 171060864 6161382 4706186..4706842 1 NC_010524.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 4706842 gidB 6161382 gidB Leptothrix cholodnii SP-6 16S rRNA methyltransferase GidB YP_001793213.1 4706186 D 395495 CDS YP_001793214.1 171060865 6161383 4706951..4707562 1 NC_010524.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: aav:Aave_0053 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 4707562 6161383 Lcho_4198 Leptothrix cholodnii SP-6 lysine exporter protein LysE/YggA YP_001793214.1 4706951 D 395495 CDS YP_001793215.1 171060866 6161384 4707661..4708431 1 NC_010524.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pol:Bpro_0076 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 4708431 6161384 Lcho_4199 Leptothrix cholodnii SP-6 cobyrinic acid ac-diamide synthase YP_001793215.1 4707661 D 395495 CDS YP_001793216.1 171060867 6161385 complement(4708432..4709523) 1 NC_010524.1 PFAM: beta-lactamase domain protein; KEGG: mpt:Mpe_A3370 hypothetical protein; beta-lactamase domain-containing protein 4709523 6161385 Lcho_4200 Leptothrix cholodnii SP-6 beta-lactamase domain-containing protein YP_001793216.1 4708432 R 395495 CDS YP_001793217.1 171060868 6161386 4709609..4710058 1 NC_010524.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: reh:H16_A0165 transcriptional regulator, MerR-family; MerR family transcriptional regulator 4710058 6161386 Lcho_4201 Leptothrix cholodnii SP-6 MerR family transcriptional regulator YP_001793217.1 4709609 D 395495 CDS YP_001793218.1 171060869 6161387 4710164..4710628 1 NC_010524.1 PFAM: thioesterase superfamily protein; KEGG: dac:Daci_5992 thioesterase superfamily protein; thioesterase superfamily protein 4710628 6161387 Lcho_4202 Leptothrix cholodnii SP-6 thioesterase superfamily protein YP_001793218.1 4710164 D 395495 CDS YP_001793219.1 171060870 6161895 4710724..4711386 1 NC_010524.1 PFAM: carbonic anhydrase; KEGG: mpt:Mpe_A3369 carbonate dehydratase; carbonate dehydratase 4711386 6161895 Lcho_4203 Leptothrix cholodnii SP-6 carbonate dehydratase YP_001793219.1 4710724 D 395495 CDS YP_001793220.1 171060871 6161896 4711396..4713207 1 NC_010524.1 catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase protein 4713207 aceK 6161896 aceK Leptothrix cholodnii SP-6 bifunctional isocitrate dehydrogenase kinase/phosphatase protein YP_001793220.1 4711396 D 395495 CDS YP_001793221.1 171060872 6161897 4713228..4714415 1 NC_010524.1 KEGG: mpt:Mpe_A3367 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 4714415 6161897 Lcho_4205 Leptothrix cholodnii SP-6 acetyl-CoA acetyltransferase YP_001793221.1 4713228 D 395495 CDS YP_001793222.1 171060873 6161898 4714439..4715152 1 NC_010524.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rpb:RPB_4520 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 4715152 6161898 Lcho_4206 Leptothrix cholodnii SP-6 lysine exporter protein LysE/YggA YP_001793222.1 4714439 D 395495 CDS YP_001793223.1 171060874 6161899 4715179..4716309 1 NC_010524.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rme:Rmet_0108 acyl-CoA dehydrogenase-like protein; acyl-CoA dehydrogenase domain-containing protein 4716309 6161899 Lcho_4207 Leptothrix cholodnii SP-6 acyl-CoA dehydrogenase domain-containing protein YP_001793223.1 4715179 D 395495 CDS YP_001793224.1 171060875 6161900 complement(4716334..4716816) 1 NC_010524.1 KEGG: pna:Pnap_0003 hypothetical protein; hypothetical protein 4716816 6161900 Lcho_4208 Leptothrix cholodnii SP-6 hypothetical protein YP_001793224.1 4716334 R 395495 CDS YP_001793225.1 171060876 6161901 complement(4716868..4717803) 1 NC_010524.1 PFAM: restriction endonuclease; KEGG: ecv:APECO1_2075 methylated adenine and cytosine restriction protein; restriction endonuclease 4717803 6161901 Lcho_4209 Leptothrix cholodnii SP-6 restriction endonuclease YP_001793225.1 4716868 R 395495 CDS YP_001793226.1 171060877 6163802 complement(4717920..4721252) 1 NC_010524.1 KEGG: dar:Daro_3006 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 4721252 6163802 Lcho_4210 Leptothrix cholodnii SP-6 multi-sensor hybrid histidine kinase YP_001793226.1 4717920 R 395495 CDS YP_001793227.1 171060878 6163803 complement(4721306..4721818) 1 NC_010524.1 KEGG: eba:ebA226 hypothetical protein; hypothetical protein 4721818 6163803 Lcho_4211 Leptothrix cholodnii SP-6 hypothetical protein YP_001793227.1 4721306 R 395495 CDS YP_001793228.1 171060879 6163804 complement(4721828..4724101) 1 NC_010524.1 KEGG: mfa:Mfla_1283 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 4724101 6163804 Lcho_4212 Leptothrix cholodnii SP-6 PAS/PAC sensor signal transduction histidine kinase YP_001793228.1 4721828 R 395495 CDS YP_001793229.1 171060880 6163805 complement(4724109..4724963) 1 NC_010524.1 KEGG: azo:azo3684 putative periplasmic binding protein; putative periplasmic-binding protein 4724963 6163805 Lcho_4213 Leptothrix cholodnii SP-6 putative periplasmic-binding protein YP_001793229.1 4724109 R 395495 CDS YP_001793230.1 171060881 6163806 complement(4725110..4726369) 1 NC_010524.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mpt:Mpe_A1565 hypothetical protein; polyhydroxyalkanoate depolymerase 4726369 6163806 Lcho_4214 Leptothrix cholodnii SP-6 polyhydroxyalkanoate depolymerase YP_001793230.1 4725110 R 395495 CDS YP_001793231.1 171060882 6163807 4726506..4727168 1 NC_010524.1 PFAM: Glutathione S-transferase domain; KEGG: mpt:Mpe_A1566 glutathione S-transferase; glutathione S-transferase domain-containing protein 4727168 6163807 Lcho_4215 Leptothrix cholodnii SP-6 glutathione S-transferase domain-containing protein YP_001793231.1 4726506 D 395495 CDS YP_001793232.1 171060883 6163808 complement(4727184..4727600) 1 NC_010524.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: mpt:Mpe_A1567 hypothetical protein; cupin 4727600 6163808 Lcho_4216 Leptothrix cholodnii SP-6 cupin YP_001793232.1 4727184 R 395495 CDS YP_001793233.1 171060884 6163889 4727729..4728646 1 NC_010524.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: bmu:Bmul_0155 ATPase BadF/BadG/BcrA/BcrD type; BadF/BadG/BcrA/BcrD type ATPase 4728646 6163889 Lcho_4217 Leptothrix cholodnii SP-6 BadF/BadG/BcrA/BcrD type ATPase YP_001793233.1 4727729 D 395495 CDS YP_001793234.1 171060885 6163890 4728679..4729797 1 NC_010524.1 KEGG: pen:PSEEN4380 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase 4729797 6163890 Lcho_4218 Leptothrix cholodnii SP-6 N-acetylglucosamine-6-phosphate deacetylase YP_001793234.1 4728679 D 395495 CDS YP_001793235.1 171060886 6163891 4729975..4731087 1 NC_010524.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: har:HEAR0106 putative TRAP-type C4-dicarboxylate transport system, periplasmic component; TRAP C4-dicarboxylate transport system permease subunit DctP 4731087 6163891 Lcho_4219 Leptothrix cholodnii SP-6 TRAP C4-dicarboxylate transport system permease subunit DctP YP_001793235.1 4729975 D 395495 CDS YP_001793236.1 171060887 6163892 4731180..4731803 1 NC_010524.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: afw:Anae109_2923 tripartite ATP-independent periplasmic transporter DctQ component; tripartite ATP-independent periplasmic transporter DctQ 4731803 6163892 Lcho_4220 Leptothrix cholodnii SP-6 tripartite ATP-independent periplasmic transporter DctQ YP_001793236.1 4731180 D 395495 CDS YP_001793237.1 171060888 6163893 4731800..4733821 1 NC_010524.1 PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pol:Bpro_4053 TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP C4-dicarboxylate transport system permease DctM 4733821 6163893 Lcho_4221 Leptothrix cholodnii SP-6 TRAP C4-dicarboxylate transport system permease DctM YP_001793237.1 4731800 D 395495 CDS YP_001793238.1 171060889 6163894 complement(4733841..4734464) 1 NC_010524.1 KEGG: aav:Aave_1579 hypothetical protein; hypothetical protein 4734464 6163894 Lcho_4222 Leptothrix cholodnii SP-6 hypothetical protein YP_001793238.1 4733841 R 395495 CDS YP_001793239.1 171060890 6160683 4734610..4735215 1 NC_010524.1 PFAM: DSBA oxidoreductase; KEGG: mpt:Mpe_A3362 putative 2-hydroxychromene-2-carboxylate isomerase protein; DSBA oxidoreductase 4735215 6160683 Lcho_4223 Leptothrix cholodnii SP-6 DSBA oxidoreductase YP_001793239.1 4734610 D 395495 CDS YP_001793240.1 171060891 6160684 complement(4735237..4735521) 1 NC_010524.1 KEGG: mpt:Mpe_A3355 hypothetical protein; hypothetical protein 4735521 6160684 Lcho_4224 Leptothrix cholodnii SP-6 hypothetical protein YP_001793240.1 4735237 R 395495 CDS YP_001793241.1 171060892 6160685 complement(4735796..4737406) 1 NC_010524.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: mpt:Mpe_A0148 putative RNA polymerase sigma N (sigma 54) factor transcription regulator protein; RNA polymerase sigma-54 subunit RpoN 4737406 6160685 Lcho_4225 Leptothrix cholodnii SP-6 RNA polymerase sigma-54 subunit RpoN YP_001793241.1 4735796 R 395495 CDS YP_001793242.1 171060893 6160686 complement(4737426..4738232) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0149 putative ATP-binding ABC transporter protein; ABC transporter-like protein 4738232 6160686 Lcho_4226 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001793242.1 4737426 R 395495 CDS YP_001793243.1 171060894 6160687 complement(4738229..4738864) 1 NC_010524.1 TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: mpt:Mpe_A0150 OstA-like protein; lipopolysaccharide transport periplasmic protein LptA 4738864 6160687 Lcho_4227 Leptothrix cholodnii SP-6 lipopolysaccharide transport periplasmic protein LptA YP_001793243.1 4738229 R 395495 CDS YP_001793244.1 171060895 6160688 complement(4739007..4739672) 1 NC_010524.1 PFAM: DSBA oxidoreductase; KEGG: mpt:Mpe_A0151 thiol:disulfide interchange protein; DSBA oxidoreductase 4739672 6160688 Lcho_4228 Leptothrix cholodnii SP-6 DSBA oxidoreductase YP_001793244.1 4739007 R 395495 CDS YP_001793245.1 171060896 6160689 complement(4739710..4740351) 1 NC_010524.1 PFAM: Sporulation domain protein; KEGG: mpt:Mpe_A0152 hypothetical protein; sporulation domain-containing protein 4740351 6160689 Lcho_4229 Leptothrix cholodnii SP-6 sporulation domain-containing protein YP_001793245.1 4739710 R 395495 CDS YP_001793246.1 171060897 6160897 complement(4740380..4742065) 1 NC_010524.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 4742065 argS 6160897 argS Leptothrix cholodnii SP-6 arginyl-tRNA synthetase YP_001793246.1 4740380 R 395495 CDS YP_001793247.1 171060898 6160898 4742204..4743538 1 NC_010524.1 PFAM: cyclic nucleotide-binding; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mpt:Mpe_A0154 serine/threonine-protein kinase; cyclic nucleotide-binding protein 4743538 6160898 Lcho_4231 Leptothrix cholodnii SP-6 cyclic nucleotide-binding protein YP_001793247.1 4742204 D 395495 CDS YP_001793248.1 171060899 6160899 4743677..4743955 1 NC_010524.1 KEGG: bra:BRADO3400 conserved hypothetical protein; putative signal peptide; putative signal peptide 4743955 6160899 Lcho_4232 Leptothrix cholodnii SP-6 putative signal peptide YP_001793248.1 4743677 D 395495 CDS YP_001793249.1 171060900 6160900 4744047..4744487 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A0307 putative transmembrane protein; hypothetical protein 4744487 6160900 Lcho_4233 Leptothrix cholodnii SP-6 hypothetical protein YP_001793249.1 4744047 D 395495 CDS YP_001793250.1 171060901 6160901 4744612..4745691 1 NC_010524.1 PFAM: VanZ family protein; KEGG: mpt:Mpe_A0308 hypothetical protein; VanZ family protein 4745691 6160901 Lcho_4234 Leptothrix cholodnii SP-6 VanZ family protein YP_001793250.1 4744612 D 395495 CDS YP_001793251.1 171060902 6160902 4745688..4746083 1 NC_010524.1 KEGG: pol:Bpro_0248 ferredoxin-like; ferredoxin-like protein 4746083 6160902 Lcho_4235 Leptothrix cholodnii SP-6 ferredoxin-like protein YP_001793251.1 4745688 D 395495 CDS YP_001793252.1 171060903 6160903 4746093..4746710 1 NC_010524.1 KEGG: mpt:Mpe_A0310 hypothetical protein; hypothetical protein 4746710 6160903 Lcho_4236 Leptothrix cholodnii SP-6 hypothetical protein YP_001793252.1 4746093 D 395495 CDS YP_001793253.1 171060904 6161126 4746863..4748032 1 NC_010524.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: mpt:Mpe_A0311 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 4748032 6161126 Lcho_4237 Leptothrix cholodnii SP-6 serine-type D-Ala-D-Ala carboxypeptidase YP_001793253.1 4746863 D 395495 CDS YP_001793254.1 171060905 6161127 4748123..4749034 1 NC_010524.1 PFAM: aminotransferase class IV; KEGG: mpt:Mpe_A0312 putative class IV aminotransferase; class IV aminotransferase 4749034 6161127 Lcho_4238 Leptothrix cholodnii SP-6 class IV aminotransferase YP_001793254.1 4748123 D 395495 CDS YP_001793255.1 171060906 6161128 4749061..4749336 1 NC_010524.1 PFAM: protein of unknown function DUF493; KEGG: bbr:BB0170 hypothetical protein; hypothetical protein 4749336 6161128 Lcho_4239 Leptothrix cholodnii SP-6 hypothetical protein YP_001793255.1 4749061 D 395495 CDS YP_001793256.1 171060907 6161129 complement(4749358..4749567) 1 NC_010524.1 KEGG: pna:Pnap_1054 hypothetical protein; hypothetical protein 4749567 6161129 Lcho_4240 Leptothrix cholodnii SP-6 hypothetical protein YP_001793256.1 4749358 R 395495 CDS YP_001793257.1 171060908 6161130 complement(4749716..4750474) 1 NC_010524.1 KEGG: vei:Veis_1576 integral membrane protein; integral membrane protein 4750474 6161130 Lcho_4241 Leptothrix cholodnii SP-6 integral membrane protein YP_001793257.1 4749716 R 395495 CDS YP_001793258.1 171060909 6161131 4750704..4751555 1 NC_010524.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: mpt:Mpe_A3409 hypothetical protein; metal-dependent hydrolase HDOD 4751555 6161131 Lcho_4242 Leptothrix cholodnii SP-6 metal-dependent hydrolase HDOD YP_001793258.1 4750704 D 395495 CDS YP_001793259.1 171060910 6161132 complement(4751566..4752096) 1 NC_010524.1 KEGG: jan:Jann_0111 hypothetical protein; hypothetical protein 4752096 6161132 Lcho_4243 Leptothrix cholodnii SP-6 hypothetical protein YP_001793259.1 4751566 R 395495 CDS YP_001793260.1 171060911 6161021 complement(4752166..4753149) 1 NC_010524.1 KEGG: pna:Pnap_0435 putative lipase transmembrane protein; putative lipase transmembrane protein 4753149 6161021 Lcho_4244 Leptothrix cholodnii SP-6 putative lipase transmembrane protein YP_001793260.1 4752166 R 395495 CDS YP_001793261.1 171060912 6161022 complement(4753188..4753607) 1 NC_010524.1 PFAM: nuclear protein SET; KEGG: mpt:Mpe_A0045 hypothetical protein; nuclear protein SET 4753607 6161022 Lcho_4245 Leptothrix cholodnii SP-6 nuclear protein SET YP_001793261.1 4753188 R 395495 CDS YP_001793262.1 171060913 6161023 4754392..4757106 1 NC_010524.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rfr:Rfer_2352 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4757106 6161023 Lcho_4246 Leptothrix cholodnii SP-6 N-acetyltransferase GCN5 YP_001793262.1 4754392 D 395495 CDS YP_001793263.1 171060914 6161024 4757232..4758209 1 NC_010524.1 KEGG: dac:Daci_2447 hypothetical protein; hypothetical protein 4758209 6161024 Lcho_4247 Leptothrix cholodnii SP-6 hypothetical protein YP_001793263.1 4757232 D 395495 CDS YP_001793264.1 171060915 6161025 4758202..4759860 1 NC_010524.1 KEGG: azo:azo0658 hypothetical membrane protein; hypothetical protein 4759860 6161025 Lcho_4248 Leptothrix cholodnii SP-6 hypothetical protein YP_001793264.1 4758202 D 395495 CDS YP_001793265.1 171060916 6161026 complement(4759861..4760079) 1 NC_010524.1 KEGG: reh:H16_B2541 hypothetical protein; hypothetical protein 4760079 6161026 Lcho_4249 Leptothrix cholodnii SP-6 hypothetical protein YP_001793265.1 4759861 R 395495 CDS YP_001793266.1 171060917 6161027 complement(4760158..4761189) 1 NC_010524.1 PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: rfr:Rfer_2380 isocitrate dehydrogenase (NAD+); isocitrate dehydrogenase (NAD(+)) 4761189 6161027 Lcho_4250 Leptothrix cholodnii SP-6 isocitrate dehydrogenase (NAD(+)) YP_001793266.1 4760158 R 395495 CDS YP_001793267.1 171060918 6163647 complement(4761317..4762174) 1 NC_010524.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 4762174 psd 6163647 psd Leptothrix cholodnii SP-6 phosphatidylserine decarboxylase YP_001793267.1 4761317 R 395495 CDS YP_001793268.1 171060919 6163648 4762315..4762626 1 NC_010524.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: rfr:Rfer_2238 protein of unknown function DUF883, ElaB; hypothetical protein 4762626 6163648 Lcho_4252 Leptothrix cholodnii SP-6 hypothetical protein YP_001793268.1 4762315 D 395495 CDS YP_001793269.1 171060920 6163649 4762687..4763076 1 NC_010524.1 KEGG: rfr:Rfer_2237 putative transmembrane protein; putative transmembrane protein 4763076 6163649 Lcho_4253 Leptothrix cholodnii SP-6 putative transmembrane protein YP_001793269.1 4762687 D 395495 CDS YP_001793270.1 171060921 6163650 4763073..4763504 1 NC_010524.1 hypothetical protein 4763504 6163650 Lcho_4254 Leptothrix cholodnii SP-6 hypothetical protein YP_001793270.1 4763073 D 395495 CDS YP_001793271.1 171060922 6163651 complement(4763525..4763956) 1 NC_010524.1 PFAM: protein of unknown function DUF59; hypothetical protein 4763956 6163651 Lcho_4255 Leptothrix cholodnii SP-6 hypothetical protein YP_001793271.1 4763525 R 395495 CDS YP_001793272.1 171060923 6163652 complement(4764026..4764421) 1 NC_010524.1 PFAM: protein of unknown function DUF59; KEGG: mag:amb1263 predicted metal-sulfur cluster biosynthetic enzyme; hypothetical protein 4764421 6163652 Lcho_4256 Leptothrix cholodnii SP-6 hypothetical protein YP_001793272.1 4764026 R 395495 CDS YP_001793273.1 171060924 6163653 4764629..4767652 1 NC_010524.1 KEGG: rfr:Rfer_2197 ribonucleotide reductase large subunit; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; ribonucleoside-diphosphate reductase 4767652 6163653 Lcho_4257 Leptothrix cholodnii SP-6 ribonucleoside-diphosphate reductase YP_001793273.1 4764629 D 395495 CDS YP_001793274.1 171060925 6163326 4767652..4768050 1 NC_010524.1 KEGG: bch:Bcen2424_3352 PilT protein domain protein; PilT domain-containing protein 4768050 6163326 Lcho_4258 Leptothrix cholodnii SP-6 PilT domain-containing protein YP_001793274.1 4767652 D 395495 CDS YP_001793275.1 171060926 6163327 complement(4768066..4768293) 1 NC_010524.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: bch:Bcen2424_3351 transcriptional regulator, AbrB family; AbrB family transcriptional regulator 4768293 6163327 Lcho_4259 Leptothrix cholodnii SP-6 AbrB family transcriptional regulator YP_001793275.1 4768066 R 395495 CDS YP_001793276.1 171060927 6163328 4768472..4769455 1 NC_010524.1 PFAM: aldo/keto reductase; KEGG: sme:SMa0563 aldehyde or keto oxidase, probable; aldo/keto reductase 4769455 6163328 Lcho_4260 Leptothrix cholodnii SP-6 aldo/keto reductase YP_001793276.1 4768472 D 395495 CDS YP_001793277.1 171060928 6163329 4769457..4770284 1 NC_010524.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: ent:Ent638_1703 excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C 4770284 6163329 Lcho_4261 Leptothrix cholodnii SP-6 excinuclease ABC subunit C YP_001793277.1 4769457 D 395495 CDS YP_001793278.1 171060929 6163330 complement(4770291..4771121) 1 NC_010524.1 KEGG: bra:BRADO0602 hypothetical protein; hypothetical protein 4771121 6163330 Lcho_4262 Leptothrix cholodnii SP-6 hypothetical protein YP_001793278.1 4770291 R 395495 CDS YP_001793279.1 171060930 6163331 4771198..4772229 1 NC_010524.1 KEGG: rpe:RPE_4585 hypothetical protein; hypothetical protein 4772229 6163331 Lcho_4263 Leptothrix cholodnii SP-6 hypothetical protein YP_001793279.1 4771198 D 395495 CDS YP_001793280.1 171060931 6162240 complement(4772223..4773155) 1 NC_010524.1 PFAM: protein of unknown function DUF344; KEGG: mpt:Mpe_A1572 hypothetical protein; hypothetical protein 4773155 6162240 Lcho_4264 Leptothrix cholodnii SP-6 hypothetical protein YP_001793280.1 4772223 R 395495 CDS YP_001793281.1 171060932 6162241 4773286..4773417 1 NC_010524.1 hypothetical protein 4773417 6162241 Lcho_4265 Leptothrix cholodnii SP-6 hypothetical protein YP_001793281.1 4773286 D 395495 CDS YP_001793282.1 171060933 6162242 complement(4773453..4774676) 1 NC_010524.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mpt:Mpe_A2069 putative HlyD family secretion protein; RND family efflux transporter MFP subunit 4774676 6162242 Lcho_4266 Leptothrix cholodnii SP-6 RND family efflux transporter MFP subunit YP_001793282.1 4773453 R 395495 CDS YP_001793283.1 171060934 6162243 complement(4774685..4777066) 1 NC_010524.1 PFAM: protein of unknown function DUF214; KEGG: mpt:Mpe_A2068 hypothetical protein; hypothetical protein 4777066 6162243 Lcho_4267 Leptothrix cholodnii SP-6 hypothetical protein YP_001793283.1 4774685 R 395495 CDS YP_001793284.1 171060935 6162244 complement(4777083..4777799) 1 NC_010524.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A2067 ABC-type anti-microbial peptide transporter, ATP-binding protein; ABC transporter-like protein 4777799 6162244 Lcho_4268 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001793284.1 4777083 R 395495 CDS YP_001793285.1 171060936 6162245 complement(4777873..4778766) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dac:Daci_0733 transcriptional regulator, LysR family; LysR family transcriptional regulator 4778766 6162245 Lcho_4269 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001793285.1 4777873 R 395495 CDS YP_001793286.1 171060937 6162246 4778928..4779677 1 NC_010524.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dac:Daci_0732 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4779677 6162246 Lcho_4270 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001793286.1 4778928 D 395495 CDS YP_001793287.1 171060938 6161219 4779722..4780714 1 NC_010524.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pol:Bpro_1455 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit Dctp 4780714 6161219 Lcho_4271 Leptothrix cholodnii SP-6 TRAP dicarboxylate transporter subunit Dctp YP_001793287.1 4779722 D 395495 CDS YP_001793288.1 171060939 6161220 4780777..4781304 1 NC_010524.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dac:Daci_0730 tripartite ATP-independent periplasmic transporter DctQ component; tripartite ATP-independent periplasmic transporter DctQ 4781304 6161220 Lcho_4272 Leptothrix cholodnii SP-6 tripartite ATP-independent periplasmic transporter DctQ YP_001793288.1 4780777 D 395495 CDS YP_001793289.1 171060940 6161221 4781329..4782588 1 NC_010524.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dac:Daci_0729 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 4782588 6161221 Lcho_4273 Leptothrix cholodnii SP-6 TRAP dicarboxylate transporter subunit DctM YP_001793289.1 4781329 D 395495 CDS YP_001793290.1 171060941 6161222 4782621..4783484 1 NC_010524.1 PFAM: Transketolase domain protein; KEGG: pol:Bpro_1461 transketolase-like; transketolase domain-containing protein 4783484 6161222 Lcho_4274 Leptothrix cholodnii SP-6 transketolase domain-containing protein YP_001793290.1 4782621 D 395495 CDS YP_001793291.1 171060942 6161223 4783481..4784497 1 NC_010524.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: dac:Daci_0727 transketolase central region; transketolase central region 4784497 6161223 Lcho_4275 Leptothrix cholodnii SP-6 transketolase central region YP_001793291.1 4783481 D 395495 CDS YP_001793292.1 171060943 6161224 4784614..4785885 1 NC_010524.1 KEGG: eba:ebA6307 O-acetylhomoserine sulfhydrylase, gene: MetY; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase 4785885 6161224 Lcho_4276 Leptothrix cholodnii SP-6 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_001793292.1 4784614 D 395495 CDS YP_001793293.1 171060944 6161225 complement(4785896..4786141) 1 NC_010524.1 hypothetical protein 4786141 6161225 Lcho_4277 Leptothrix cholodnii SP-6 hypothetical protein YP_001793293.1 4785896 R 395495 CDS YP_001793294.1 171060945 6160625 4786796..4787323 1 NC_010524.1 PFAM: Phosphoglycerate mutase; KEGG: rca:Rcas_1740 phosphohistidine phosphatase, SixA; putative phosphohistidine phosphatase SixA 4787323 6160625 Lcho_4278 Leptothrix cholodnii SP-6 putative phosphohistidine phosphatase SixA YP_001793294.1 4786796 D 395495 CDS YP_001793295.1 171060946 6160626 4787414..4788661 1 NC_010524.1 PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_2551 extracellular ligand-binding receptor; extracellular ligand-binding receptor 4788661 6160626 Lcho_4279 Leptothrix cholodnii SP-6 extracellular ligand-binding receptor YP_001793295.1 4787414 D 395495 CDS YP_001793296.1 171060947 6160627 4788753..4790942 1 NC_010524.1 KEGG: pna:Pnap_3987 putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane; putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane 4790942 6160627 Lcho_4280 Leptothrix cholodnii SP-6 putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane YP_001793296.1 4788753 D 395495 CDS YP_001793297.1 171060948 6160628 4790987..4792531 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_4100 periplasmic sensor signal transduction histidine kinase; histidine kinase 4792531 6160628 Lcho_4281 Leptothrix cholodnii SP-6 histidine kinase YP_001793297.1 4790987 D 395495 CDS YP_001793298.1 171060949 6160629 4792528..4793181 1 NC_010524.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: pol:Bpro_4101 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 4793181 6160629 Lcho_4282 Leptothrix cholodnii SP-6 two component LuxR family transcriptional regulator YP_001793298.1 4792528 D 395495 CDS YP_001793299.1 171060950 6160630 4793282..4793623 1 NC_010524.1 TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: dar:Daro_0570 PhnA protein; alkylphosphonate utilization operon protein PhnA 4793623 6160630 Lcho_4283 Leptothrix cholodnii SP-6 alkylphosphonate utilization operon protein PhnA YP_001793299.1 4793282 D 395495 CDS YP_001793300.1 171060951 6160631 4793681..4794406 1 NC_010524.1 PFAM: DTW domain containing protein; KEGG: rfr:Rfer_3956 DTW; DTW domain-containing protein 4794406 6160631 Lcho_4284 Leptothrix cholodnii SP-6 DTW domain-containing protein YP_001793300.1 4793681 D 395495 CDS YP_001793301.1 171060952 6161226 complement(4795520..4795618) 1 NC_010524.1 hypothetical protein 4795618 6161226 Lcho_4285 Leptothrix cholodnii SP-6 hypothetical protein YP_001793301.1 4795520 R 395495 CDS YP_001793302.1 171060953 6161227 4795843..4797186 1 NC_010524.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: cch:Cag_1392 putative type II DNA modification enzyme (methyltransferase); DNA methylase N-4/N-6 domain-containing protein 4797186 6161227 Lcho_4286 Leptothrix cholodnii SP-6 DNA methylase N-4/N-6 domain-containing protein YP_001793302.1 4795843 D 395495 CDS YP_001793303.1 171060954 6161228 complement(4797183..4798082) 1 NC_010524.1 hypothetical protein 4798082 6161228 Lcho_4287 Leptothrix cholodnii SP-6 hypothetical protein YP_001793303.1 4797183 R 395495 CDS YP_001793304.1 171060955 6161229 complement(4798140..4801316) 1 NC_010524.1 PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: ade:Adeh_3869 type III restriction enzyme, res subunit; type III restriction protein res subunit 4801316 6161229 Lcho_4288 Leptothrix cholodnii SP-6 type III restriction protein res subunit YP_001793304.1 4798140 R 395495 CDS YP_001793305.1 171060956 6161230 4801539..4801886 1 NC_010524.1 KEGG: pfo:Pfl_3518 hypothetical protein; hypothetical protein 4801886 6161230 Lcho_4289 Leptothrix cholodnii SP-6 hypothetical protein YP_001793305.1 4801539 D 395495 CDS YP_001793306.1 171060957 6161231 4802062..4802706 1 NC_010524.1 hypothetical protein 4802706 6161231 Lcho_4290 Leptothrix cholodnii SP-6 hypothetical protein YP_001793306.1 4802062 D 395495 CDS YP_001793307.1 171060958 6161232 4802808..4803218 1 NC_010524.1 KEGG: dar:Daro_0419 hypothetical protein; hypothetical protein 4803218 6161232 Lcho_4291 Leptothrix cholodnii SP-6 hypothetical protein YP_001793307.1 4802808 D 395495 CDS YP_001793308.1 171060959 6161776 complement(4803649..4804227) 1 NC_010524.1 KEGG: rme:Rmet_2169 hypothetical protein; hypothetical protein 4804227 6161776 Lcho_4292 Leptothrix cholodnii SP-6 hypothetical protein YP_001793308.1 4803649 R 395495 CDS YP_001793309.1 171060960 6161777 complement(4804227..4804823) 1 NC_010524.1 KEGG: pst:PSPTO_0023 hypothetical protein; hypothetical protein 4804823 6161777 Lcho_4293 Leptothrix cholodnii SP-6 hypothetical protein YP_001793309.1 4804227 R 395495 CDS YP_001793310.1 171060961 6161778 complement(4804820..4805944) 1 NC_010524.1 PFAM: helix-turn-helix domain protein; KEGG: pst:PSPTO_0022 DNA-binding protein; XRE family transcriptional regulator 4805944 6161778 Lcho_4294 Leptothrix cholodnii SP-6 XRE family transcriptional regulator YP_001793310.1 4804820 R 395495 CDS YP_001793311.1 171060962 6161779 4806060..4806371 1 NC_010524.1 KEGG: rle:pRL100468 hypothetical protein; hypothetical protein 4806371 6161779 Lcho_4295 Leptothrix cholodnii SP-6 hypothetical protein YP_001793311.1 4806060 D 395495 CDS YP_001793312.1 171060963 6161780 complement(4806411..4807298) 1 NC_010524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_1765 transcriptional regulator, LysR family; LysR family transcriptional regulator 4807298 6161780 Lcho_4296 Leptothrix cholodnii SP-6 LysR family transcriptional regulator YP_001793312.1 4806411 R 395495 CDS YP_001793313.1 171060964 6161781 4807434..4808399 1 NC_010524.1 PFAM: conserved hypothetical protein; KEGG: dac:Daci_0295 hypothetical protein; hypothetical protein 4808399 6161781 Lcho_4297 Leptothrix cholodnii SP-6 hypothetical protein YP_001793313.1 4807434 D 395495 CDS YP_001793314.1 171060965 6161782 complement(4808416..4809255) 1 NC_010524.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: dac:Daci_0581 transcriptional regulator, IclR family; IclR family transcriptional regulator 4809255 6161782 Lcho_4298 Leptothrix cholodnii SP-6 IclR family transcriptional regulator YP_001793314.1 4808416 R 395495 CDS YP_001793315.1 171060966 6162082 4809470..4810435 1 NC_010524.1 PFAM: beta-lactamase domain protein; KEGG: pol:Bpro_4534 beta-lactamase-like; beta-lactamase domain-containing protein 4810435 6162082 Lcho_4299 Leptothrix cholodnii SP-6 beta-lactamase domain-containing protein YP_001793315.1 4809470 D 395495 CDS YP_001793316.1 171060967 6162083 4810441..4812177 1 NC_010524.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: pol:Bpro_4535 hypothetical protein; FAD-dependent oxidoreductase 4812177 6162083 Lcho_4300 Leptothrix cholodnii SP-6 FAD-dependent oxidoreductase YP_001793316.1 4810441 D 395495 CDS YP_001793317.1 171060968 6162084 4812197..4812415 1 NC_010524.1 KEGG: pol:Bpro_4536 hypothetical protein; hypothetical protein 4812415 6162084 Lcho_4301 Leptothrix cholodnii SP-6 hypothetical protein YP_001793317.1 4812197 D 395495 CDS YP_001793318.1 171060969 6162085 4812429..4813760 1 NC_010524.1 An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; homogentisate 1,2-dioxygenase 4813760 6162085 Lcho_4302 Leptothrix cholodnii SP-6 homogentisate 1,2-dioxygenase YP_001793318.1 4812429 D 395495 CDS YP_001793319.1 171060970 6162086 4813757..4815094 1 NC_010524.1 KEGG: pol:Bpro_2996 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969; fumarylacetoacetase 4815094 6162086 Lcho_4303 Leptothrix cholodnii SP-6 fumarylacetoacetase YP_001793319.1 4813757 D 395495 CDS YP_001793320.1 171060971 6162087 complement(4815082..4816059) 1 NC_010524.1 PFAM: protein of unknown function DUF182; KEGG: aav:Aave_3933 protein of unknown function DUF182; hypothetical protein 4816059 6162087 Lcho_4304 Leptothrix cholodnii SP-6 hypothetical protein YP_001793320.1 4815082 R 395495 CDS YP_001793321.1 171060972 6162088 complement(4816065..4818302) 1 NC_010524.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rle:RL2500 putative isoquinoline 1-oxidoreductase beta subunit; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein 4818302 6162088 Lcho_4305 Leptothrix cholodnii SP-6 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein YP_001793321.1 4816065 R 395495 CDS YP_001793322.1 171060973 6163083 complement(4818314..4818787) 1 NC_010524.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rle:RL2499 putative isoquinoline 1-oxidoreductase alpha subunit; 2Fe-2S iron-sulfur cluster-binding domain-containing protein 4818787 6163083 Lcho_4306 Leptothrix cholodnii SP-6 2Fe-2S iron-sulfur cluster-binding domain-containing protein YP_001793322.1 4818314 R 395495 CDS YP_001793323.1 171060974 6163084 4819008..4819916 1 NC_010524.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: pfl:PFL_2378 transcriptional regulator, AraC family; AraC family transcriptional regulator 4819916 6163084 Lcho_4307 Leptothrix cholodnii SP-6 AraC family transcriptional regulator YP_001793323.1 4819008 D 395495 CDS YP_001793324.1 171060975 6163085 complement(4820037..4820600) 1 NC_010524.1 TIGRFAM: phasin family protein; PFAM: Phasin family protein; KEGG: mpt:Mpe_A1506 hypothetical protein; phasin family protein 4820600 6163085 Lcho_4308 Leptothrix cholodnii SP-6 phasin family protein YP_001793324.1 4820037 R 395495 CDS YP_001793325.1 171060976 6163086 4820933..4821865 1 NC_010524.1 PFAM: pseudouridine synthase; KEGG: mms:mma_3511 RNA pseudouridylate synthase family protein; pseudouridine synthase 4821865 6163086 Lcho_4309 Leptothrix cholodnii SP-6 pseudouridine synthase YP_001793325.1 4820933 D 395495 CDS YP_001793326.1 171060977 6163087 complement(4821875..4822885) 1 NC_010524.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: vei:Veis_3569 oxidoreductase domain protein; oxidoreductase domain-containing protein 4822885 6163087 Lcho_4310 Leptothrix cholodnii SP-6 oxidoreductase domain-containing protein YP_001793326.1 4821875 R 395495 CDS YP_001793327.1 171060978 6163088 4823011..4824237 1 NC_010524.1 KEGG: rfr:Rfer_2773 hypothetical protein; putative metal dependent phosphohydrolase 4824237 6163088 Lcho_4311 Leptothrix cholodnii SP-6 putative metal dependent phosphohydrolase YP_001793327.1 4823011 D 395495 CDS YP_001793328.1 171060979 6163089 complement(4824238..4824753) 1 NC_010524.1 KEGG: reu:Reut_B5395 probable transmembrane protein; putative transmembrane protein 4824753 6163089 Lcho_4312 Leptothrix cholodnii SP-6 putative transmembrane protein YP_001793328.1 4824238 R 395495 CDS YP_001793329.1 171060980 6163096 4824975..4825997 1 NC_010524.1 PFAM: peptidase M12A astacin; peptidase domain protein; SMART: peptidase metallopeptidase; KEGG: fgr:FG08198.1 hypothetical protein; peptidase domain-containing protein 4825997 6163096 Lcho_4313 Leptothrix cholodnii SP-6 peptidase domain-containing protein YP_001793329.1 4824975 D 395495 CDS YP_001793330.1 171060981 6163097 complement(4826020..4826937) 1 NC_010524.1 KEGG: mpt:Mpe_A1035 hypothetical protein; hypothetical protein 4826937 6163097 Lcho_4314 Leptothrix cholodnii SP-6 hypothetical protein YP_001793330.1 4826020 R 395495 CDS YP_001793331.1 171060982 6163098 complement(4826967..4828187) 1 NC_010524.1 PFAM: glucose sorbosone dehydrogenase; KEGG: mpt:Mpe_A2752 glucose/sorbosone dehydrogenase; glucose sorbosone dehydrogenase 4828187 6163098 Lcho_4315 Leptothrix cholodnii SP-6 glucose sorbosone dehydrogenase YP_001793331.1 4826967 R 395495 CDS YP_001793332.1 171060983 6163099 4828399..4829163 1 NC_010524.1 PFAM: inositol monophosphatase; KEGG: smd:Smed_3968 inositol-phosphate phosphatase; inositol-phosphate phosphatase 4829163 6163099 Lcho_4316 Leptothrix cholodnii SP-6 inositol-phosphate phosphatase YP_001793332.1 4828399 D 395495 CDS YP_001793333.1 171060984 6163100 4829200..4830231 1 NC_010524.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb20365 putative ABC transporter iron-binding protein; extracellular solute-binding protein 4830231 6163100 Lcho_4317 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001793333.1 4829200 D 395495 CDS YP_001793334.1 171060985 6163101 4830228..4832075 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jan:Jann_1364 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4832075 6163101 Lcho_4318 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001793334.1 4830228 D 395495 CDS YP_001793335.1 171060986 6163102 4832077..4833171 1 NC_010524.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: oan:Oant_3843 ABC transporter related; ABC transporter-like protein 4833171 6163102 Lcho_4319 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001793335.1 4832077 D 395495 CDS YP_001793336.1 171060987 6161198 4833283..4834665 1 NC_010524.1 KEGG: bxe:Bxe_B2084 beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1; beta-galactosidase 4834665 6161198 Lcho_4320 Leptothrix cholodnii SP-6 beta-galactosidase YP_001793336.1 4833283 D 395495 CDS YP_001793337.1 171060988 6161199 4834755..4835984 1 NC_010524.1 PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B2083 ABC sugar transporter, periplasmic ligand binding protein; extracellular solute-binding protein 4835984 6161199 Lcho_4321 Leptothrix cholodnii SP-6 extracellular solute-binding protein YP_001793337.1 4834755 D 395495 CDS YP_001793338.1 171060989 6161200 4836046..4836960 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_1109 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4836960 6161200 Lcho_4322 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001793338.1 4836046 D 395495 CDS YP_001793339.1 171060990 6161201 4836957..4837895 1 NC_010524.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2081 ABC sugar transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 4837895 6161201 Lcho_4323 Leptothrix cholodnii SP-6 binding-protein-dependent transport system inner membrane protein YP_001793339.1 4836957 D 395495 CDS YP_001793340.1 171060991 6161202 4837927..4839012 1 NC_010524.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rfr:Rfer_1107 ABC transporter related; ABC transporter-like protein 4839012 6161202 Lcho_4324 Leptothrix cholodnii SP-6 ABC transporter-like protein YP_001793340.1 4837927 D 395495 CDS YP_001793341.1 171060992 6161203 4839058..4840113 1 NC_010524.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rfr:Rfer_1112 transcriptional regulator, LacI family; LacI family transcriptional regulator 4840113 6161203 Lcho_4325 Leptothrix cholodnii SP-6 LacI family transcriptional regulator YP_001793341.1 4839058 D 395495 CDS YP_001793342.1 171060993 6161204 4840192..4841265 1 NC_010524.1 PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: smd:Smed_2952 oxidoreductase domain protein; oxidoreductase domain-containing protein 4841265 6161204 Lcho_4326 Leptothrix cholodnii SP-6 oxidoreductase domain-containing protein YP_001793342.1 4840192 D 395495 CDS YP_001793343.1 171060994 6164053 4841281..4842030 1 NC_010524.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: atc:AGR_L_982 hypothetical protein; xylose isomerase domain-containing protein 4842030 6164053 Lcho_4327 Leptothrix cholodnii SP-6 xylose isomerase domain-containing protein YP_001793343.1 4841281 D 395495 CDS YP_001793344.1 171060995 6164054 4842049..4843107 1 NC_010524.1 PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: bra:BRADO0446 conserved hypothetical protein; putative xylose isomerase-like; xylose isomerase domain-containing protein 4843107 6164054 Lcho_4328 Leptothrix cholodnii SP-6 xylose isomerase domain-containing protein YP_001793344.1 4842049 D 395495 CDS YP_001793345.1 171060996 6164055 4843130..4844293 1 NC_010524.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bxe:Bxe_A3671 putative oxidoreductase; oxidoreductase domain-containing protein 4844293 6164055 Lcho_4329 Leptothrix cholodnii SP-6 oxidoreductase domain-containing protein YP_001793345.1 4843130 D 395495 CDS YP_001793346.1 171060997 6164056 4844317..4846827 1 NC_010524.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: ret:RHE_PF00473 beta-glucosidase protein; glycoside hydrolase family 3 4846827 6164056 Lcho_4330 Leptothrix cholodnii SP-6 glycoside hydrolase family 3 YP_001793346.1 4844317 D 395495 CDS YP_001793347.1 171060998 6164057 complement(4846854..4848458) 1 NC_010524.1 PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: ajs:Ajs_3664 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4848458 6164057 Lcho_4331 Leptothrix cholodnii SP-6 methyl-accepting chemotaxis sensory transducer YP_001793347.1 4846854 R 395495 CDS YP_001793348.1 171060999 6164058 4848568..4849770 1 NC_010524.1 PFAM: major facilitator superfamily MFS_1; KEGG: rle:pRL120185 putative transmembrane transporter; major facilitator transporter 4849770 6164058 Lcho_4332 Leptothrix cholodnii SP-6 major facilitator transporter YP_001793348.1 4848568 D 395495 CDS YP_001793349.1 171061000 6164059 4849893..4851338 1 NC_010524.1 PFAM: RES domain protein; KEGG: nha:Nham_1974 hypothetical protein; RES domain-containing protein 4851338 6164059 Lcho_4333 Leptothrix cholodnii SP-6 RES domain-containing protein YP_001793349.1 4849893 D 395495 CDS YP_001793350.1 171061001 6164000 complement(4851406..4851825) 1 NC_010524.1 PFAM: PilT protein domain protein; KEGG: eba:ebA3350 plasmid stability protein; PilT domain-containing protein 4851825 6164000 Lcho_4334 Leptothrix cholodnii SP-6 PilT domain-containing protein YP_001793350.1 4851406 R 395495 CDS YP_001793351.1 171061002 6164001 complement(4851822..4852076) 1 NC_010524.1 KEGG: vei:Veis_3768 plasmid stability protein StbC; plasmid stability protein StbC 4852076 6164001 Lcho_4335 Leptothrix cholodnii SP-6 plasmid stability protein StbC YP_001793351.1 4851822 R 395495 CDS YP_001793352.1 171061003 6164002 4852240..4852899 1 NC_010524.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: reu:Reut_B3694 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 4852899 6164002 Lcho_4336 Leptothrix cholodnii SP-6 lysine exporter protein LysE/YggA YP_001793352.1 4852240 D 395495 CDS YP_001793353.1 171061004 6164003 4852915..4853565 1 NC_010524.1 PFAM: Negative transcriptional regulator; KEGG: rfr:Rfer_3387 negative transcriptional regulator; FMN-binding negative transcriptional regulator 4853565 6164003 Lcho_4337 Leptothrix cholodnii SP-6 FMN-binding negative transcriptional regulator YP_001793353.1 4852915 D 395495 CDS YP_001793354.1 171061005 6164004 complement(4853580..4854950) 1 NC_010524.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bra:BRADO2304 C4-dicarboxylate transport transcriptional regulatory protein (response regulator in two-component reguatory system); two component sigma-54 specific Fis family transcriptional regulator 4854950 6164004 Lcho_4338 Leptothrix cholodnii SP-6 two component sigma-54 specific Fis family transcriptional regulator YP_001793354.1 4853580 R 395495 CDS YP_001793355.1 171061006 6164005 complement(4854954..4856756) 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bja:blr3730 two-component hybrid sensor and regulator; histidine kinase 4856756 6164005 Lcho_4339 Leptothrix cholodnii SP-6 histidine kinase YP_001793355.1 4854954 R 395495 CDS YP_001793356.1 171061007 6164006 complement(4856824..4858167) 1 NC_010524.1 involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 4858167 6164006 Lcho_4340 Leptothrix cholodnii SP-6 C4-dicarboxylate transporter DctA YP_001793356.1 4856824 R 395495 CDS YP_001793357.1 171061008 6164039 4858580..4859770 1 NC_010524.1 PFAM: major facilitator superfamily MFS_1; KEGG: vei:Veis_1471 major facilitator superfamily MFS_1; major facilitator transporter 4859770 6164039 Lcho_4341 Leptothrix cholodnii SP-6 major facilitator transporter YP_001793357.1 4858580 D 395495 CDS YP_001793358.1 171061009 6164040 complement(4859783..4860607) 1 NC_010524.1 PFAM: protein of unknown function DUF81; KEGG: bpt:Bpet2726 putative integral membrane protein; hypothetical protein 4860607 6164040 Lcho_4342 Leptothrix cholodnii SP-6 hypothetical protein YP_001793358.1 4859783 R 395495 CDS YP_001793359.1 171061010 6164041 4860772..4861428 1 NC_010524.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rme:Rmet_3629 transcriptional regulator, GntR family; GntR family transcriptional regulator 4861428 6164041 Lcho_4343 Leptothrix cholodnii SP-6 GntR family transcriptional regulator YP_001793359.1 4860772 D 395495 CDS YP_001793360.1 171061011 6164042 complement(4861441..4862352) 1 NC_010524.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: rme:Rmet_3634 ornithine cyclodeaminase/mu-crystallin; ornithine cyclodeaminase/mu-crystallin 4862352 6164042 Lcho_4344 Leptothrix cholodnii SP-6 ornithine cyclodeaminase/mu-crystallin YP_001793360.1 4861441 R 395495 CDS YP_001793361.1 171061012 6164043 complement(4862400..4863128) 1 NC_010524.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rme:Rmet_3629 transcriptional regulator, GntR family; GntR family transcriptional regulator 4863128 6164043 Lcho_4345 Leptothrix cholodnii SP-6 GntR family transcriptional regulator YP_001793361.1 4862400 R 395495 CDS YP_001793362.1 171061013 6164044 complement(4863125..4863880) 1 NC_010524.1 PFAM: protein of unknown function DUF81; KEGG: reh:H16_B1882 hypothetical membrane spanning protein; hypothetical protein 4863880 6164044 Lcho_4346 Leptothrix cholodnii SP-6 hypothetical protein YP_001793362.1 4863125 R 395495 CDS YP_001793363.1 171061014 6164045 complement(4863900..4864235) 1 NC_010524.1 PFAM: ferredoxin; KEGG: reh:H16_B1886 ferredoxin; ferredoxin 4864235 6164045 Lcho_4347 Leptothrix cholodnii SP-6 ferredoxin YP_001793363.1 4863900 R 395495 CDS YP_001793364.1 171061015 6163962 complement(4864247..4864543) 1 NC_010524.1 KEGG: rme:Rmet_3637 hypothetical protein; hypothetical protein 4864543 6163962 Lcho_4348 Leptothrix cholodnii SP-6 hypothetical protein YP_001793364.1 4864247 R 395495 CDS YP_001793365.1 171061016 6163963 complement(4864590..4864925) 1 NC_010524.1 PFAM: ferredoxin; KEGG: reu:Reut_B3759 ferredoxin; ferredoxin 4864925 6163963 Lcho_4349 Leptothrix cholodnii SP-6 ferredoxin YP_001793365.1 4864590 R 395495 CDS YP_001793366.1 171061017 6163964 4865298..4866029 1 NC_010524.1 PFAM: TENA/THI-4 domain protein; KEGG: reu:Reut_B3762 coenzyme PQQ synthesis C; TENA/THI-4 domain-containing protein 4866029 6163964 Lcho_4350 Leptothrix cholodnii SP-6 TENA/THI-4 domain-containing protein YP_001793366.1 4865298 D 395495 CDS YP_001793367.1 171061018 6163965 4866095..4867570 1 NC_010524.1 PFAM: Aldehyde Dehydrogenase_; KEGG: reu:Reut_B3763 aldehyde dehydrogenase; aldehyde dehydrogenase 4867570 6163965 Lcho_4351 Leptothrix cholodnii SP-6 aldehyde dehydrogenase YP_001793367.1 4866095 D 395495 CDS YP_001793368.1 171061019 6163966 4867598..4868077 1 NC_010524.1 PFAM: protein of unknown function DUF336; KEGG: rme:Rmet_3631 protein of unknown function DUF336; hypothetical protein 4868077 6163966 Lcho_4352 Leptothrix cholodnii SP-6 hypothetical protein YP_001793368.1 4867598 D 395495 CDS YP_001793369.1 171061020 6163967 4868103..4869098 1 NC_010524.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: reh:H16_B1877 putative oxidoreductase; oxidoreductase FAD/NAD(P)-binding subunit 4869098 6163967 Lcho_4353 Leptothrix cholodnii SP-6 oxidoreductase FAD/NAD(P)-binding subunit YP_001793369.1 4868103 D 395495 CDS YP_001793370.1 171061021 6160943 4869533..4871062 1 NC_010524.1 KEGG: reh:H16_B1883 hypothetical membrane spanning protein; hypothetical protein 4871062 6160943 Lcho_4354 Leptothrix cholodnii SP-6 hypothetical protein YP_001793370.1 4869533 D 395495 CDS YP_001793371.1 171061022 6160944 4871068..4872552 1 NC_010524.1 PFAM: gamma-glutamyltranspeptidase; KEGG: tth:TTC0403 gamma-glutamyltranspeptidase; gamma-glutamyltransferase 4872552 6160944 Lcho_4355 Leptothrix cholodnii SP-6 gamma-glutamyltransferase YP_001793371.1 4871068 D 395495 CDS YP_001793372.1 171061023 6160945 4872594..4873211 1 NC_010524.1 PFAM: Glutathione S-transferase domain; KEGG: pol:Bpro_2015 glutathione S-transferase-like; glutathione S-transferase domain-containing protein 4873211 6160945 Lcho_4356 Leptothrix cholodnii SP-6 glutathione S-transferase domain-containing protein YP_001793372.1 4872594 D 395495 CDS YP_001793373.1 171061024 6160946 complement(4873225..4874208) 1 NC_010524.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: psa:PST_2897 probable oxidoreductase; 2OG-Fe(II) oxygenase 4874208 6160946 Lcho_4357 Leptothrix cholodnii SP-6 2OG-Fe(II) oxygenase YP_001793373.1 4873225 R 395495 CDS YP_001793374.1 171061025 6160947 4874421..4877429 1 NC_010524.1 KEGG: pna:Pnap_3261 hypothetical protein; hypothetical protein 4877429 6160947 Lcho_4358 Leptothrix cholodnii SP-6 hypothetical protein YP_001793374.1 4874421 D 395495 CDS YP_001793375.1 171061026 6160948 4877426..4879102 1 NC_010524.1 PFAM: OmpA/MotB domain protein; KEGG: pmy:Pmen_2437 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 4879102 6160948 Lcho_4359 Leptothrix cholodnii SP-6 OmpA/MotB domain-containing protein YP_001793375.1 4877426 D 395495 CDS YP_001793376.1 171061027 6160949 4879175..4880344 1 NC_010524.1 PFAM: glutamine amidotransferase class-I; DGPFAETKE family protein; KEGG: tbd:Tbd_0876 hypothetical protein; DGPFAETKE family protein 4880344 6160949 Lcho_4360 Leptothrix cholodnii SP-6 DGPFAETKE family protein YP_001793376.1 4879175 D 395495 CDS YP_001793377.1 171061028 6161133 4880434..4880847 1 NC_010524.1 PFAM: DGPFAETKE family protein; KEGG: mpt:Mpe_A0021 hypothetical protein; DGPFAETKE family protein 4880847 6161133 Lcho_4361 Leptothrix cholodnii SP-6 DGPFAETKE family protein YP_001793377.1 4880434 D 395495 CDS YP_001793378.1 171061029 6161134 4880884..4881306 1 NC_010524.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpt:Mpe_A0020 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 4881306 6161134 Lcho_4362 Leptothrix cholodnii SP-6 glyoxalase/bleomycin resistance protein/dioxygenase YP_001793378.1 4880884 D 395495 CDS YP_001793379.1 171061030 6161135 4881296..4882582 1 NC_010524.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_B0234 unknown sigma factor; RNA polymerase ECF-subfamily sigma factor 4882582 6161135 Lcho_4363 Leptothrix cholodnii SP-6 RNA polymerase ECF-subfamily sigma factor YP_001793379.1 4881296 D 395495 CDS YP_001793380.1 171061031 6161136 complement(4882583..4882921) 1 NC_010524.1 KEGG: mpt:Mpe_B0622 hypothetical protein; hypothetical protein 4882921 6161136 Lcho_4364 Leptothrix cholodnii SP-6 hypothetical protein YP_001793380.1 4882583 R 395495 CDS YP_001793381.1 171061032 6161137 4883128..4884381 1 NC_010524.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: cvi:CV_2841 ATP-dependent RNA helicase; DEAD/DEAH box helicase 4884381 6161137 Lcho_4365 Leptothrix cholodnii SP-6 DEAD/DEAH box helicase YP_001793381.1 4883128 D 395495 CDS YP_001793382.1 171061033 6161138 4884416..4885141 1 NC_010524.1 KEGG: pna:Pnap_0222 putative esterase; putative esterase 4885141 6161138 Lcho_4366 Leptothrix cholodnii SP-6 putative esterase YP_001793382.1 4884416 D 395495 CDS YP_001793383.1 171061034 6161139 4885138..4885632 1 NC_010524.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: syx:SynWH7803_0016 peptide methionine sulfoxide reductase; methionine-R-sulfoxide reductase 4885632 6161139 Lcho_4367 Leptothrix cholodnii SP-6 methionine-R-sulfoxide reductase YP_001793383.1 4885138 D 395495 CDS YP_001793384.1 171061035 6161178 complement(4885633..4886400) 1 NC_010524.1 PFAM: AAA-4 family protein; KEGG: tbd:Tbd_1077 predicted transcriptional regulator; putative transcriptional regulator 4886400 6161178 Lcho_4368 Leptothrix cholodnii SP-6 putative transcriptional regulator YP_001793384.1 4885633 R 395495 CDS YP_001793385.1 171061036 6161179 complement(4886403..4887158) 1 NC_010524.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: psa:PST_2883 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 4887158 6161179 Lcho_4369 Leptothrix cholodnii SP-6 short-chain dehydrogenase/reductase SDR YP_001793385.1 4886403 R 395495 CDS YP_001793386.1 171061037 6161180 4887215..4889119 1 NC_010524.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aav:Aave_0105 radical SAM domain protein; radical SAM domain-containing protein 4889119 6161180 Lcho_4370 Leptothrix cholodnii SP-6 radical SAM domain-containing protein YP_001793386.1 4887215 D 395495 CDS YP_001793387.1 171061038 6161181 complement(4889146..4890915) 1 NC_010524.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aav:Aave_3093 integral membrane sensor signal transduction histidine kinase; histidine kinase 4890915 6161181 Lcho_4371 Leptothrix cholodnii SP-6 histidine kinase YP_001793387.1 4889146 R 395495 CDS YP_001793388.1 171061039 6161182 complement(4890909..4891037) 1 NC_010524.1 hypothetical protein 4891037 6161182 Lcho_4372 Leptothrix cholodnii SP-6 hypothetical protein YP_001793388.1 4890909 R 395495 CDS YP_001793389.1 171061040 6161183 4891326..4892645 1 NC_010524.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: cvi:CV_4003 ammonium transporter; ammonium transporter 4892645 6161183 Lcho_4373 Leptothrix cholodnii SP-6 ammonium transporter YP_001793389.1 4891326 D 395495 CDS YP_001793390.1 171061041 6161184 4892676..4892957 1 NC_010524.1 KEGG: rme:Rmet_1299 hypothetical protein; hypothetical protein 4892957 6161184 Lcho_4374 Leptothrix cholodnii SP-6 hypothetical protein YP_001793390.1 4892676 D 395495 CDS YP_001793391.1 171061042 6161028 4892957..4893532 1 NC_010524.1 PFAM: MOSC domain containing protein; KEGG: mpt:Mpe_A3716 hypothetical protein; MOSC domain-containing protein 4893532 6161028 Lcho_4375 Leptothrix cholodnii SP-6 MOSC domain-containing protein YP_001793391.1 4892957 D 395495 CDS YP_001793392.1 171061043 6161029 4893573..4895552 1 NC_010524.1 KEGG: mxa:MXAN_5509 hypothetical protein; superfamily I DNA/RNA helicase 4895552 6161029 Lcho_4376 Leptothrix cholodnii SP-6 superfamily I DNA/RNA helicase YP_001793392.1 4893573 D 395495 CDS YP_001793393.1 171061044 6161030 complement(4895549..4896250) 1 NC_010524.1 PFAM: phospholipase/Carboxylesterase; KEGG: mpt:Mpe_A0054 carboxylesterase; phospholipase/carboxylesterase 4896250 6161030 Lcho_4377 Leptothrix cholodnii SP-6 phospholipase/carboxylesterase YP_001793393.1 4895549 R 395495 CDS YP_001793394.1 171061045 6161031 4896304..4896996 1 NC_010524.1 PFAM: dienelactone hydrolase; KEGG: rso:RS04764 putative transmembrane protein; carboxymethylenebutenolidase 4896996 6161031 Lcho_4378 Leptothrix cholodnii SP-6 carboxymethylenebutenolidase YP_001793394.1 4896304 D 395495 CDS YP_001793395.1 171061046 6161032 complement(4897025..4898086) 1 NC_010524.1 PFAM: Catalase domain protein; KEGG: mpt:Mpe_A1580 putative catalase; catalase 4898086 6161032 Lcho_4379 Leptothrix cholodnii SP-6 catalase YP_001793395.1 4897025 R 395495 CDS YP_001793396.1 171061047 6161033 complement(4898598..4899362) 1 NC_010524.1 PFAM: Rare lipoprotein A; KEGG: mxa:MXAN_3573 putative lipoprotein; rare lipoprotein A 4899362 6161033 Lcho_4380 Leptothrix cholodnii SP-6 rare lipoprotein A YP_001793396.1 4898598 R 395495 CDS YP_001793397.1 171061048 6161034 4899782..4901035 1 NC_010524.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: dar:Daro_2873 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 4901035 6161034 Lcho_4381 Leptothrix cholodnii SP-6 2-nitropropane dioxygenase YP_001793397.1 4899782 D 395495 CDS YP_001793398.1 171061049 6161100 4901216..4903453 1 NC_010524.1 KEGG: pna:Pnap_3680 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type; isocitrate dehydrogenase 4903453 6161100 Lcho_4382 Leptothrix cholodnii SP-6 isocitrate dehydrogenase YP_001793398.1 4901216 D 395495 CDS YP_001793399.1 171061050 6161101 4903654..4904367 1 NC_010524.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rfr:Rfer_3416 conserved hypothetical protein, potential methyltransferase; type 11 methyltransferase 4904367 6161101 Lcho_4383 Leptothrix cholodnii SP-6 type 11 methyltransferase YP_001793399.1 4903654 D 395495 CDS YP_001793400.1 171061051 6161102 complement(4904459..4905898) 1 NC_010524.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 4905898 trmE 6161102 trmE Leptothrix cholodnii SP-6 tRNA modification GTPase TrmE YP_001793400.1 4904459 R 395495 CDS YP_001793401.1 171061052 6161103 complement(4906314..4907993) 1 NC_010524.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: mpt:Mpe_A3825 60kDa inner-membrane protein; 60 kDa inner membrane insertion protein 4907993 6161103 Lcho_4385 Leptothrix cholodnii SP-6 60 kDa inner membrane insertion protein YP_001793401.1 4906314 R 395495 CDS YP_001793402.1 171061053 6161104 complement(4907996..4908334) 1 NC_010524.1 PFAM: protein of unknown function DUF37; KEGG: dac:Daci_6057 protein of unknown function DUF37; hypothetical protein 4908334 6161104 Lcho_4386 Leptothrix cholodnii SP-6 hypothetical protein YP_001793402.1 4907996 R 395495 CDS YP_001793403.1 171061054 6161105 complement(4908454..4908924) 1 NC_010524.1 KEGG: mpt:Mpe_A3827 ribonuclease P protein component; hypothetical protein 4908924 6161105 Lcho_4387 Leptothrix cholodnii SP-6 hypothetical protein YP_001793403.1 4908454 R 395495 CDS YP_001793404.1 171061055 6161106 complement(4908989..4909123) 1 NC_010524.1 PFAM: ribosomal protein L34; KEGG: pna:Pnap_4116 ribosomal protein L34; 50S ribosomal protein L34 4909123 6161106 Lcho_4388 Leptothrix cholodnii SP-6 50S ribosomal protein L34 YP_001793404.1 4908989 R 395495 CDS