-- dump date 20140619_131524 -- class Genbank::CDS -- table cds_note -- id note YP_001789042.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. YP_001789043.1 KEGG: mpt:Mpe_A0002 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain YP_001789044.1 KEGG: mpt:Mpe_A0003 DNA topoisomerase (ATP-hydrolyzing); TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II YP_001789045.1 KEGG: pna:Pnap_1125 hypothetical protein YP_001789046.1 PFAM: regulatory protein LysR; KEGG: pna:Pnap_3443 transcriptional regulator, LysR family YP_001789047.1 KEGG: ajs:Ajs_2095 hypothetical protein YP_001789048.1 KEGG: pna:Pnap_0166 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001789049.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: eba:ebA2890 hypothetical protein YP_001789050.1 PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: eba:ebA2889 hypothetical protein YP_001789051.1 KEGG: pol:Bpro_2657 hypothetical protein YP_001789052.1 PFAM: Mammalian cell entry related domain protein; KEGG: aav:Aave_1818 mammalian cell entry related domain protein YP_001789053.1 KEGG: pol:Bpro_2659 ABC-type transport system ipermease component YP_001789054.1 PFAM: protein of unknown function UPF0118; KEGG: rfr:Rfer_2147 protein of unknown function UPF0118 YP_001789055.1 KEGG: ajs:Ajs_0603 MazG nucleotide pyrophosphohydrolase YP_001789056.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: cvi:CV_0045 probable oxidoreductase iron/ascorbate family YP_001789057.1 PFAM: polysaccharide deacetylase; KEGG: ajs:Ajs_0773 polysaccharide deacetylase YP_001789058.1 KEGG: ajs:Ajs_0772 tetratricopeptide TPR_2 repeat protein YP_001789059.1 KEGG: rso:RSc2274 putative lipoprotein YP_001789060.1 KEGG: bxe:Bxe_A2972 putative transmembrane protein YP_001789061.1 KEGG: abo:ABO_0894 hypothetical protein YP_001789062.1 PFAM: glycosyl transferase group 1; KEGG: reh:H16_B2199 lipopolysaccharide N-acetylglucosaminyl transferase YP_001789063.1 KEGG: rme:Rmet_4161 putative transmembrane protein YP_001789064.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: rso:RS01781 hypothetical protein YP_001789065.1 KEGG: mpt:Mpe_A0049 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_001789066.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: rxy:Rxyl_0136 transcriptional regulator, GntR family YP_001789067.1 PFAM: OsmC family protein; KEGG: rfr:Rfer_3388 OsmC-like protein YP_001789068.1 PFAM: Negative transcriptional regulator; KEGG: rfr:Rfer_3387 negative transcriptional regulator YP_001789069.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bmu:Bmul_4135 GCN5-related N-acetyltransferase YP_001789070.1 PFAM: protein of unknown function DUF427; KEGG: mpt:Mpe_A1381 hypothetical protein YP_001789071.1 PFAM: protein of unknown function DUF323; KEGG: mpt:Mpe_A1379 hypothetical protein YP_001789072.1 KEGG: mpt:Mpe_A1056 periplasmic protein/biopolymer transport YP_001789073.1 TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; Septum formation inhibitor MinC domain protein; KEGG: mpt:Mpe_A3345 putative septum site-determining protein YP_001789074.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ajs:Ajs_0066 septum site-determining protein MinD YP_001789075.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell YP_001789077.1 PFAM: pyruvate carboxyltransferase; KEGG: pol:Bpro_2353 pyruvate carboxyltransferase YP_001789078.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pol:Bpro_2352 L-carnitine dehydratase/bile acid-inducible protein F YP_001789079.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_2351 uncharacterized protein UPF0065 YP_001789080.1 KEGG: pna:Pnap_0797 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_001789081.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis YP_001789082.1 PFAM: Lipocalin family protein; KEGG: tbd:Tbd_1196 outer membrane lipoprotein YP_001789083.1 PFAM: transcriptional regulator domain protein; KEGG: jan:Jann_3721 transcriptional regulatory protein-like YP_001789085.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; KEGG: rpb:RPB_0891 adenylate/guanylate cyclase YP_001789086.1 PFAM: response regulator receiver; KEGG: xau:Xaut_3859 response regulator receiver protein YP_001789087.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: cau:Caur_0402 histidine kinase YP_001789088.1 PFAM: electron transport protein SCO1/SenC; KEGG: scl:sce2899 SCO1/SenC family lipoprotein YP_001789089.1 KEGG: gdi:GDI2643 putative nitrate transport protein NrtA YP_001789090.1 PFAM: alpha/beta hydrolase fold; KEGG: rha:RHA1_ro10186 hypothetical protein YP_001789091.1 KEGG: sus:Acid_4622 homoserine O-acetyltransferase YP_001789092.1 PFAM: globin; KEGG: ade:Adeh_1754 globin like protein YP_001789093.1 KEGG: scl:sce8365 hypothetical protein YP_001789094.1 PFAM: ATP-binding region ATPase domain protein; KEGG: rru:Rru_A3213 PAS/PAC sensor signal transduction histidine kinase YP_001789095.1 PFAM: GAF domain protein; histidine kinase HAMP region domain protein; KEGG: bja:blr2862 two-component hybrid sensor and regulator YP_001789096.1 KEGG: rle:pRL110111 hypothetical protein YP_001789097.1 KEGG: mpt:Mpe_A3139 hypothetical protein YP_001789098.1 KEGG: mpt:Mpe_A2525 hypothetical protein YP_001789099.1 PFAM: metallophosphoesterase; KEGG: rfr:Rfer_3683 metallophosphoesterase YP_001789100.1 PFAM: luciferase family protein; KEGG: bmu:Bmul_2136 luciferase family protein YP_001789101.1 KEGG: mgm:Mmc1_3719 hypothetical protein YP_001789102.1 PFAM: SlyX family protein; KEGG: bbr:BB1266 hypothetical protein YP_001789103.1 KEGG: bja:bll2732 putative cytochrome c YP_001789104.1 PFAM: Sulphur oxidation protein SoxZ; KEGG: bja:bll2733 probable sulfur oxidation protein YP_001789105.1 with SoxZ catalyzes the oxidation of sulfur compounds YP_001789106.1 KEGG: bbt:BBta_2764 putative cytochrome c, putative SoxX protein YP_001789107.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bja:bll2736 putative aldehyde dehydrogenase protein YP_001789108.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: smd:Smed_6324 (2Fe-2S)-binding domain protein YP_001789109.1 PFAM: multicopper oxidase type 2; KEGG: mgr:MGG_08046 hypothetical protein YP_001789110.1 involved in biogenesis of respiratory and photosynthetic systems; KEGG: ppf:Pput_2533 electron transport protein SCO1/SenC YP_001789111.1 PFAM: Chromate transporter; KEGG: rfr:Rfer_2757 chromate transporter YP_001789112.1 PFAM: Chromate transporter; KEGG: vei:Veis_3786 chromate transporter YP_001789113.1 PFAM: Acyl transferase; KEGG: dac:Daci_1762 (acyl-carrier protein) S-malonyltransferase YP_001789114.1 KEGG: mpt:Mpe_A2891 triphosphoribosyl-dephospho-CoA synthase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; PFAM: triphosphoribosyl-dephospho-CoA protein YP_001789115.1 KEGG: dac:Daci_1764 holo-ACP synthase, malonate decarboxylase-specific YP_001789116.1 TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: dac:Daci_1765 malonate decarboxylase, gamma subunit YP_001789117.1 The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A YP_001789118.1 TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase delta subunit; KEGG: dac:Daci_1767 malonate decarboxylase acyl carrier protein YP_001789119.1 TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: mpt:Mpe_A2895 alpha subunit of malonate decarboxylase YP_001789120.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A2898 hypothetical protein YP_001789121.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mpt:Mpe_A2899 putative GntR-family transcription regulator YP_001789122.1 PFAM: aminotransferase class I and II; KEGG: pol:Bpro_1410 aminotransferase YP_001789123.1 PFAM: DSBA oxidoreductase; KEGG: mpt:Mpe_A0744 2-hydroxychromene-2-carboxylate isomerase family protein YP_001789124.1 KEGG: aav:Aave_3831 restriction endonuclease YP_001789125.1 SMART: tyrosine protein kinase; serine/threonine protein kinase; leucine-rich repeat-containing protein typical subtype; KEGG: pfo:Pfl_3676 serine/threonine protein kinase YP_001789126.1 KEGG: pol:Bpro_0661 D-serine deaminase YP_001789127.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pna:Pnap_0620 GAF modulated sigma54 specific transcriptional regulator, fis family YP_001789128.1 PFAM: Rhodanese domain protein; KEGG: mgm:Mmc1_2517 rhodanese domain protein YP_001789129.1 KEGG: pna:Pnap_0619 putative flavoprotein involved in K+ transport YP_001789130.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: pol:Bpro_1051 flavin reductase-like, FMN-binding YP_001789131.1 PFAM: DTW domain containing protein; KEGG: mms:mma_1862 hypothetical protein YP_001789132.1 PFAM: dienelactone hydrolase; KEGG: ter:Tery_0392 carboxymethylenebutenolidase YP_001789133.1 PFAM: aldo/keto reductase; KEGG: bmu:Bmul_3074 aldo/keto reductase YP_001789134.1 PFAM: protein of unknown function UPF0016; KEGG: mpt:Mpe_A0366 putative transmembrane protein YP_001789135.1 TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: mpt:Mpe_A0560 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) YP_001789136.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: pol:Bpro_0674 transcriptional regulator, AsnC family YP_001789137.1 PFAM: heat shock protein DnaJ domain protein YP_001789138.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: mpt:Mpe_A0557 UDP-N-acetylglucosamine diphosphorylase YP_001789139.1 KEGG: mpt:Mpe_A0556 putative lipoprotein YP_001789140.1 KEGG: mpt:Mpe_A0555 putative lipoprotein YP_001789141.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs YP_001789142.1 KEGG: reh:H16_A0259 dihydroneopterin aldolase YP_001789143.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mpt:Mpe_A0552 putative oxidoreductase protein YP_001789144.1 PFAM: protein of unknown function DUF185; KEGG: mpt:Mpe_A0551 hypothetical protein YP_001789145.1 KEGG: ajs:Ajs_0499 hypothetical protein YP_001789146.1 PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: mpt:Mpe_A3298 tRNA nucleotidyltransferase YP_001789147.1 PFAM: Glutathione S-transferase domain; KEGG: aav:Aave_4206 glutathione S-transferase, N-terminal domain YP_001789148.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pfo:Pfl_2004 two component, sigma-54 specific, transcriptional regulator, fis family YP_001789149.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pen:PSEEN2417 sensor histidine kinase YP_001789150.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: mpt:Mpe_A3296 nucleoside-diphosphate-sugar epimerase YP_001789151.1 PFAM: Lytic transglycosylase catalytic; KEGG: mpt:Mpe_A3295 putative transglycosylase YP_001789152.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A3294 LysR family regulatory protein YP_001789154.1 PFAM: TfoX domain protein; KEGG: afw:Anae109_0262 TfoX domain protein YP_001789155.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: mpt:Mpe_A3291 hypothetical protein YP_001789156.1 PFAM: OmpW family protein; KEGG: dac:Daci_4836 OmpW family protein YP_001789157.1 KEGG: aav:Aave_4058 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_001789158.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: mpt:Mpe_A3287 putative hemolysin YP_001789159.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine YP_001789160.1 PFAM: intradiol ring-cleavage dioxygenase; KEGG: pol:Bpro_3458 intradiol ring-cleavage dioxygenase YP_001789161.1 KEGG: mpt:Mpe_A0034 hypothetical protein YP_001789162.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis YP_001789164.1 KEGG: bpt:Bpet0636 hypothetical protein YP_001789165.1 KEGG: rfr:Rfer_4021 hypothetical protein YP_001789166.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase YP_001789167.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: mpt:Mpe_A3251 putative acyltransferase YP_001789168.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: mpt:Mpe_A3250 lipid A biosynthesis lauroyl acyltransferase YP_001789169.1 PFAM: diaminopimelate epimerase; KEGG: pol:Bpro_1058 diaminopimelate epimerase YP_001789170.1 PFAM: protein of unknown function DUF484; KEGG: mpt:Mpe_A3244 hypothetical protein YP_001789171.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mpt:Mpe_A3243 putative site specific integrase/recombinase protein YP_001789172.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: bpd:BURPS668_0884 xylulokinase YP_001789173.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: vei:Veis_3165 helix-turn-helix-domain containing protein, AraC type YP_001789174.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: vei:Veis_3167 mannitol dehydrogenase, C-terminal domain YP_001789175.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: vei:Veis_3168 ABC transporter related YP_001789176.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3169 binding-protein-dependent transport systems inner membrane component YP_001789177.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3170 binding-protein-dependent transport systems inner membrane component YP_001789178.1 PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_3171 extracellular solute-binding protein, family 1 YP_001789179.1 SMART: PUA domain containing protein; KEGG: mpt:Mpe_A3242 hypothetical protein YP_001789180.1 KEGG: dac:Daci_1738 hypothetical protein YP_001789181.1 PFAM: outer membrane efflux protein; KEGG: dac:Daci_1739 outer membrane efflux protein YP_001789182.1 KEGG: dac:Daci_1740 hypothetical protein YP_001789183.1 KEGG: dac:Daci_1741 conserved hypothetical secreted protein YP_001789184.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: dac:Daci_1742 heavy metal efflux pump, CzcA family YP_001789185.1 KEGG: dac:Daci_1743 hypothetical protein YP_001789186.1 KEGG: pna:Pnap_1251 hypothetical protein YP_001789187.1 KEGG: ajs:Ajs_1464 hypothetical protein YP_001789188.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: pol:Bpro_1178 heavy metal translocating P-type ATPase YP_001789189.1 PFAM: Ankyrin; KEGG: pol:Bpro_4103 ankyrin YP_001789190.1 PFAM: protein of unknown function DUF336; KEGG: dac:Daci_1203 protein of unknown function DUF336 YP_001789191.1 PFAM: flagellar transcriptional activator; KEGG: mpt:Mpe_A2869 transcriptional regulator YP_001789192.1 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems YP_001789193.1 KEGG: aav:Aave_0260 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_001789194.1 PFAM: flavin-containing monooxygenase FMO; KEGG: mlo:mlr7328 hypothetical protein YP_001789195.1 PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: pmy:Pmen_3460 glycine cleavage T protein (aminomethyl transferase) YP_001789196.1 PFAM: nitrogen regulatory protein P-II; KEGG: mpt:Mpe_A0171 nitrogen regulatory protein P-II-2 YP_001789197.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mfa:Mfla_0434 ammonium transporter YP_001789198.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: pol:Bpro_5295 electron-transferring-flavoprotein dehydrogenase YP_001789199.1 PFAM: N-formylglutamate amidohydrolase; KEGG: azo:azo3002 conserved hypothetical formylglutamte amindohyrolase YP_001789200.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B2188 transcriptional regulator, LysR-family YP_001789201.1 PFAM: FAD dependent oxidoreductase; KEGG: reh:H16_B2189 D-amino-acid dehydrogenase YP_001789202.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: azo:azo3005 probable electron transfer flavoprotein, beta subunit YP_001789203.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: azo:azo3006 probable electron transfer flavoprotein, alpha subunit YP_001789204.1 PFAM: protein of unknown function DUF886; KEGG: azo:azo3007 hypothetical protein YP_001789205.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: azo:azo3009 putative DNA binding helix-turn helix protein YP_001789206.1 TIGRFAM: glutamine synthetase, type III; PFAM: glutamine synthetase catalytic region; KEGG: reh:H16_B2191 glutamine synthetase YP_001789207.1 PFAM: glutamine amidotransferase class-II; KEGG: reh:H16_B2192 glutamine amidotransferases class-II YP_001789208.1 PFAM: glutamate synthase alpha subunit domain protein; KEGG: mfa:Mfla_0458 glutamate synthase, alpha subunit-like protein YP_001789209.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; ferredoxin-dependent glutamate synthase; KEGG: rxy:Rxyl_2501 ferredoxin-dependent glutamate synthase YP_001789210.1 KEGG: xau:Xaut_3182 hypothetical protein YP_001789211.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: xau:Xaut_3181 ferredoxin YP_001789212.1 KEGG: xau:Xaut_3180 conserved hypothetical cytosolic protein YP_001789213.1 PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: pmy:Pmen_3456 glycine cleavage T protein (aminomethyl transferase) YP_001789214.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine YP_001789215.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: nmu:Nmul_A0357 methenyltetrahydrofolate cyclohydrolase YP_001789216.1 KEGG: rfr:Rfer_2918 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_001789217.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: bxe:Bxe_A2213 putative ferredoxin subunit of nitrate/nitrite reductase (NADPH) YP_001789218.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rso:RSp1222 probable nitrite reductase NADPH (large subunit) oxidoreductase protein YP_001789219.1 PFAM: cyclic nucleotide-binding; KEGG: mpt:Mpe_A3813 cAMP-dependent protein kinase - catabolite gene activator and regulatory subunit YP_001789220.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: bxe:Bxe_B2429 putative pterin-4-alpha-carbinolamine dehydratase (PcbD) YP_001789221.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: mpt:Mpe_A3810 sodium/hydrogen exchanger family protein YP_001789222.1 KEGG: mpt:Mpe_A3809 arabinose-5-phosphate isomerase; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS) YP_001789223.1 TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: mpt:Mpe_A3808 3-deoxy-manno-octulosonate-8-phosphatase YP_001789224.1 PFAM: protein of unknown function DUF1239; KEGG: mpt:Mpe_A3807 putative transmembrane protein YP_001789225.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpt:Mpe_A3806 short chain dehydrogenase YP_001789226.1 PFAM: RNP-1 like RNA-binding protein; KEGG: mpt:Mpe_A3805 RNA-binding region RNP-1 YP_001789227.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: mpt:Mpe_A3804 putative transmembrane protein YP_001789228.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: mpt:Mpe_A3803 putative choline dehydrogenase lipoprotein oxidoreductase YP_001789229.1 PFAM: protein of unknown function DUF81; KEGG: mpt:Mpe_A3802 hypothetical protein YP_001789230.1 PFAM: beta-lactamase domain protein; KEGG: mpt:Mpe_A0066 cAMP phosphodiesterases, class-II, metallo-beta-lactamase superfamily YP_001789231.1 PFAM: Forkhead-associated protein; KEGG: mpt:Mpe_A0067 hypothetical protein YP_001789232.1 PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: mpt:Mpe_A0068 serine/threonine specific protein phosphatase (putative) YP_001789233.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mpt:Mpe_A0069 putative serine/threonine protein kinase YP_001789234.1 PFAM: Integral membrane protein TerC; KEGG: mpt:Mpe_A0070 hypothetical protein YP_001789235.1 PFAM: SWIB/MDM2 domain protein; KEGG: mpt:Mpe_A0056 hypothetical protein YP_001789236.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis YP_001789237.1 PFAM: protein of unknown function DUF1234; KEGG: mpt:Mpe_A3781 hypothetical protein YP_001789238.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: mpt:Mpe_A3780 putative chromosome partitioning protein ParB YP_001789239.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: mpt:Mpe_A3779 hypothetical protein YP_001789240.1 PFAM: protein of unknown function DUF444; KEGG: mpt:Mpe_A3778 hypothetical protein YP_001789241.1 PFAM: SpoVR family protein; KEGG: mpt:Mpe_A3777 hypothetical protein YP_001789242.1 PFAM: FAD linked oxidase domain protein; KEGG: mpt:Mpe_A3774 putative oxidoreductase YP_001789243.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: pna:Pnap_3266 putative transcriptional regulator, Crp/Fnr family YP_001789244.1 KEGG: rfr:Rfer_0021 hypothetical protein YP_001789245.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mpt:Mpe_A3371 putative GntR-family transcriptional regulator YP_001789246.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_2470 binding-protein-dependent transport systems inner membrane component YP_001789247.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A3373 ABC transporter permease protein YP_001789248.1 KEGG: pna:Pnap_3269 twin-arginine translocation pathway signal YP_001789249.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mpt:Mpe_A3375 ABC transporter ATP-binding protein YP_001789250.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: mpt:Mpe_A3376 hydantoin racemase YP_001789251.1 KEGG: azo:azo1492 putative histidine protein kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001789252.1 PFAM: protein of unknown function DUF45; KEGG: mpt:Mpe_A3377 hypothetical protein YP_001789253.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mpt:Mpe_A3378 putative acyltransferase YP_001789254.1 TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase central region; KEGG: mpt:Mpe_A3379 putative phosphatase protein YP_001789255.1 KEGG: mpt:Mpe_A3380 glycine--tRNA ligase; TIGRFAM: glycyl-tRNA synthetase, beta subunit YP_001789256.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_001789257.1 KEGG: mpt:Mpe_A0256 hypothetical protein YP_001789258.1 PFAM: Nucleotidyl transferase; KEGG: mpt:Mpe_A0257 putative mannose-1-phosphate guanyltransferase-related protein YP_001789259.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: rfr:Rfer_0227 hemerythrin HHE cation binding protein YP_001789260.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: ajs:Ajs_3959 transketolase YP_001789261.1 KEGG: reh:H16_A3146 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_001789262.1 KEGG: pca:Pcar_1811 hypothetical protein YP_001789263.1 KEGG: pca:Pcar_1810 hypothetical protein YP_001789264.1 KEGG: pca:Pcar_1809 hypothetical protein YP_001789265.1 KEGG: cph:Cpha266_1443 hypothetical protein YP_001789266.1 KEGG: mpt:Mpe_A0262 putative signal peptide protein YP_001789267.1 TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: mpt:Mpe_A0263 biotin acetyl-CoA-carboxylase synthetase YP_001789268.1 PFAM: nuclear protein SET; KEGG: mpt:Mpe_A0264 hypothetical protein YP_001789269.1 decatenates replicating daughter chromosomes YP_001789270.1 PFAM: GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: saz:Sama_3396 response regulator receiver protein YP_001789271.1 PFAM: Auxin Efflux Carrier; KEGG: mpt:Mpe_A0268 putative MdcF malonate transporter YP_001789272.1 KEGG: neu:NE1377 protein of unknown function DUF132 YP_001789273.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mpt:Mpe_A3350 putative sugar transport protein YP_001789274.1 KEGG: ajs:Ajs_3750 hypothetical protein YP_001789275.1 KEGG: rfr:Rfer_3780 hypothetical protein YP_001789276.1 PFAM: Na+/solute symporter; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rfr:Rfer_3779 periplasmic sensor signal transduction histidine kinase YP_001789277.1 PFAM: response regulator receiver; KEGG: rfr:Rfer_3778 response regulator receiver domain protein YP_001789278.1 KEGG: rfr:Rfer_3777 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_001789279.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; protein of unknown function DUF1289; KEGG: rfr:Rfer_3823 YbaK/prolyl-tRNA synthetase associated protein YP_001789280.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ajs:Ajs_3752 major facilitator superfamily MFS_1 YP_001789282.1 PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: mpt:Mpe_A3043 DNA binding response regulator, LuxR family YP_001789283.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mpt:Mpe_A3044 methanol utilization control sensor protein MoxY, putative YP_001789284.1 PFAM: coenzyme PQQ biosynthesis protein A YP_001789285.1 possibly involved in transport of pyrroloquinoline quinone transport YP_001789286.1 Required in the synthesis of PPQ, but its exact function is unknown YP_001789287.1 PFAM: coenzyme PQQ synthesis D; KEGG: azo:azo1189 PqqD protein YP_001789288.1 KEGG: azo:azo1190 pyrroloquinoline quinone biosynthesis protein PqqE; TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001789289.1 PFAM: UspA domain protein; KEGG: mpt:Mpe_A3490 universal stress protein YP_001789290.1 KEGG: reu:Reut_B3636 hypothetical protein YP_001789291.1 PFAM: cytochrome c oxidase subunit III; KEGG: pol:Bpro_0729 cytochrome c oxidase, subunit III YP_001789292.1 PFAM: cytochrome c oxidase subunit III; KEGG: pol:Bpro_0728 cytochrome c oxidase subunit III YP_001789293.1 KEGG: pol:Bpro_0727 cytochrome-c oxidase; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_001789294.1 PFAM: cytochrome c oxidase subunit II; KEGG: har:HEAR1115 putative cytochrome c oxidase polypeptide II precursor (cytochrome cbb3 subunit 2) (oxidase aa(3) subunit 2) ith a fused monohemic cytochrome c at its C terminus YP_001789295.1 KEGG: mms:mma_1857 hypothetical protein YP_001789296.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: pol:Bpro_4739 YbaK/prolyl-tRNA synthetase associated region YP_001789297.1 KEGG: azo:azo2876 hypothetical protein YP_001789298.1 TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: psa:PST_3162 alkyl hydroperoxide reductase subunit C YP_001789299.1 TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutaredoxin; KEGG: rso:RSp0246 probable alkyl hydroperoxide reductase (subunit F) oxidoreductase protein YP_001789300.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_4560 transcriptional regulator, LysR family YP_001789301.1 PFAM: DSBA oxidoreductase; KEGG: aav:Aave_3987 DsbA oxidoreductase YP_001789302.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bch:Bcen2424_3500 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001789303.1 KEGG: mpt:Mpe_A0593 hypothetical protein YP_001789304.1 PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: mpt:Mpe_A0594 family M61 unassigned peptidase YP_001789305.1 KEGG: mpt:Mpe_A0595 hypothetical protein YP_001789306.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: aav:Aave_0882 enoyl-CoA hydratase/isomerase YP_001789307.1 KEGG: mpt:Mpe_A0592 putative thiol:disulfide interchange protein YP_001789308.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: mpt:Mpe_A0591 monooxygenase family protein YP_001789309.1 PFAM: Tail Collar domain protein; KEGG: pna:Pnap_4767 phage tail collar domain protein YP_001789310.1 PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: mpt:Mpe_A0589 hypothetical protein YP_001789311.1 TIGRFAM: GTP-binding protein YchF; PFAM: GTP-binding protein HSR1-related; Protein of unknown function DUF933; KEGG: mpt:Mpe_A3166 putative GTP-binding protein YP_001789313.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: rru:Rru_A1847 transglutaminase-like YP_001789314.1 KEGG: dac:Daci_1594 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_001789315.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: azo:azo3673 two-component system histidine kinase YP_001789317.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bte:BTH_I0673 DNA-binding response regulator YP_001789318.1 PFAM: regulatory protein AsnC/Lrp family; Helix-turn-helix type 11 domain protein; KEGG: rfr:Rfer_3882 transcriptional regulator, AsnC family YP_001789319.1 catalyzes the formation of L-proline from L-ornithine YP_001789320.1 KEGG: dar:Daro_1057 twin-arginine translocation pathway signal YP_001789321.1 TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: vch:VC1560 catalase/peroxidase YP_001789322.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: pmy:Pmen_0570 metal dependent phosphohydrolase YP_001789323.1 PFAM: protein of unknown function DUF748; KEGG: mpt:Mpe_A2234 hypothetical protein YP_001789324.1 KEGG: eba:ebB57 hypothetical protein YP_001789325.1 KEGG: eba:ebB56 hypothetical protein YP_001789326.1 PFAM: conserved hypothetical protein; KEGG: rfr:Rfer_3194 uncharacterized protein UPF0065 YP_001789327.1 PFAM: Endoribonuclease L-PSP; KEGG: pol:Bpro_2665 endoribonuclease L-PSP YP_001789328.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 YP_001789329.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: bbr:BB0155 probable oxidoreductase YP_001789330.1 KEGG: reh:H16_B0032 acetyltransferase YP_001789331.1 KEGG: cau:Caur_3354 hypothetical protein YP_001789332.1 KEGG: maq:Maqu_1318 hypothetical protein YP_001789333.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; aminotransferase class-III; KEGG: bpt:Bpet4818 lipopolysaccharides biosynthesis aminotransferase YP_001789334.1 PFAM: polysaccharide biosynthesis protein; KEGG: bpt:Bpet1527 hypothetical protein YP_001789335.1 KEGG: bpt:Bpet1526 acetyltransferase YP_001789336.1 PFAM: glycosyl transferase group 1; KEGG: bpt:Bpet1525 glycosyltransferase YP_001789337.1 PFAM: glycosyl transferase group 1; KEGG: plu:plu4805 WblI protein YP_001789338.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mpt:Mpe_A0605 hypothetical protein YP_001789339.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mpt:Mpe_A0607 lipopolysaccharide biosynthesis protein YP_001789340.1 PFAM: sugar transferase; KEGG: mpt:Mpe_A0608 putative sugar transferase YP_001789341.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: mpt:Mpe_A0609 polysaccharide biosynthesis protein YP_001789342.1 PFAM: Patatin; KEGG: aav:Aave_2086 patatin YP_001789343.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: reh:H16_A0400 excinuclease ABC, ATPase subunit (A) YP_001789345.1 PFAM: Pirin domain protein; KEGG: azo:azo3369 hypothetical protein YP_001789346.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: eba:ebA3879 acyl carrier protein phosphodiesterase YP_001789347.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azo:azo3371 putative transcriptional regulator, LysR family YP_001789348.1 KEGG: pna:Pnap_1706 hypothetical protein YP_001789349.1 KEGG: rpc:RPC_0663 proline dehydrogenase YP_001789350.1 PFAM: Glutathione S-transferase domain; KEGG: aav:Aave_0048 glutathione S-transferase, C-terminal domain YP_001789351.1 PFAM: glutaredoxin; KEGG: rfr:Rfer_0010 glutaredoxin YP_001789352.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: mpt:Mpe_A3688 putative signal transduction protein YP_001789353.1 KEGG: mgi:Mflv_3257 GTP cyclohydrolase II YP_001789354.1 PFAM: protein of unknown function DUF1688; KEGG: rha:RHA1_ro00257 hypothetical protein YP_001789355.1 TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: rfr:Rfer_2073 uracil phosphoribosyltransferase YP_001789356.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: mpt:Mpe_A3620 putative glutamate synthase YP_001789357.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: kra:Krad_2011 diguanylate cyclase YP_001789358.1 Catalyzes the deamination of cytosine to uracil and ammonia YP_001789359.1 PFAM: Glutathione S-transferase domain; KEGG: aav:Aave_4668 glutathione S-transferase, N-terminal domain YP_001789361.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine YP_001789362.1 TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: mpt:Mpe_A3583 hypothetical protein YP_001789364.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mpt:Mpe_A3578 putative peptidase YP_001789365.1 PFAM: Auxin Efflux Carrier; KEGG: mpt:Mpe_A0129 malonate transporter, putative YP_001789366.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: aav:Aave_0755 TRAP dicarboxylate transporter, DctP subunit YP_001789367.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; KEGG: pna:Pnap_0046 carbohydrate kinase, thermoresistant glucokinase family YP_001789368.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pna:Pnap_0047 periplasmic binding protein/LacI transcriptional regulator YP_001789369.1 KEGG: mpt:Mpe_A1429 L-serine ammonia-lyase; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_001789370.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: cvi:CV_3427 hypothetical protein YP_001789371.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS YP_001789372.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: asa:ASA_3266 chemotaxis protein CheA YP_001789373.1 KEGG: rpe:RPE_1195 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001789374.1 PFAM: CheW domain protein; KEGG: psb:Psyr_0784 CheW-like protein YP_001789375.1 PFAM: MCP methyltransferase CheR-type; KEGG: rfr:Rfer_0904 MCP methyltransferase, CheR-type YP_001789376.1 stimulates methylation of MCP proteins; KEGG: rfr:Rfer_0905 CheD, stimulates methylation of MCP proteins YP_001789377.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: dar:Daro_1148 chemotaxis-specific methylesterase YP_001789378.1 PFAM: NnrUfamily protein; KEGG: mpt:Mpe_A0055 hypothetical protein YP_001789379.1 PFAM: UvrD/REP helicase; KEGG: mpt:Mpe_A0128 putative ATP-dependent DNA helicase rep protein YP_001789380.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: pha:PSHAa2649 serine protease precursor YP_001789381.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; peptidase domain protein; KEGG: pha:PSHAa2649 serine protease precursor YP_001789382.1 PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: aav:Aave_0649 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) YP_001789383.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: mpt:Mpe_A0276 preprotein translocase YajC subunit YP_001789384.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane YP_001789385.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF YP_001789386.1 KEGG: mpt:Mpe_A0279 hypothetical protein YP_001789387.1 PFAM: protein of unknown function DUF494; KEGG: mpt:Mpe_A0280 hypothetical protein YP_001789388.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: mpt:Mpe_A0281 putative smf protein YP_001789389.1 PFAM: Peptidoglycan-binding LysM; KEGG: mpt:Mpe_A0282 putative signal peptide protein YP_001789390.1 KEGG: mpt:Mpe_A0283 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_001789391.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: ajs:Ajs_4053 methionyl-tRNA formyltransferase YP_001789392.1 KEGG: mpt:Mpe_A0286 hypothetical protein YP_001789393.1 PFAM: AzlC family protein; KEGG: mpt:Mpe_A0287 hypothetical protein YP_001789394.1 PFAM: branched-chain amino acid transport; KEGG: ajs:Ajs_4055 branched-chain amino acid transport YP_001789395.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway YP_001789396.1 KEGG: pna:Pnap_4909 protein of unknown function DUF88 YP_001789397.1 PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_2453 DNA polymerase, beta domain protein region YP_001789398.1 PFAM: protein of unknown function DUF86; KEGG: afw:Anae109_0233 protein of unknown function DUF86 YP_001789399.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate YP_001789400.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_001789401.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis YP_001789402.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_001789403.1 KEGG: mpt:Mpe_A0293 hypothetical protein YP_001789404.1 PFAM: Thioredoxin domain; KEGG: mpt:Mpe_A0294 putative thioredoxin protein YP_001789405.1 KEGG: pna:Pnap_3863 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_001789406.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway YP_001789407.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: mpt:Mpe_A0297 hypothetical protein YP_001789408.1 KEGG: mpt:Mpe_A0298 hypothetical protein YP_001789409.1 KEGG: ajs:Ajs_3939 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C YP_001789410.1 PFAM: peptidase M22 glycoprotease; KEGG: mpt:Mpe_A0301 putative transmembrane protein YP_001789411.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: mpt:Mpe_A0302 putative ribosomal-protein acetyltransferase YP_001789412.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: mpt:Mpe_A0303 putative DNA polymerase-related protein, bacteriophage-type YP_001789413.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: mpt:Mpe_A0305 transport protein YP_001789414.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_001789415.1 KEGG: mpt:Mpe_A3221 hypothetical protein YP_001789416.1 KEGG: ajs:Ajs_3626 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_001789417.1 PFAM: cytochrome c assembly protein; KEGG: mpt:Mpe_A3219 ABC-type uncharacterized transport system permease component-like protein YP_001789418.1 KEGG: pfl:PFL_5308 hypothetical protein YP_001789419.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A3217 signal transduction histidine kinase YP_001789420.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mpt:Mpe_A3216 type IV pilus expression regulatory protein YP_001789421.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: mpt:Mpe_A3215 N-acetyl-anhydromuranmyl-L-alanine amidase YP_001789422.1 Catalyzes the rate-limiting step in dNTP synthesis YP_001789423.1 Catalyzes the rate-limiting step in dNTP synthesis YP_001789424.1 PFAM: protein of unknown function DUF167; KEGG: pol:Bpro_1104 protein of unknown function DUF167 YP_001789426.1 PFAM: PfkB domain protein; KEGG: mpt:Mpe_A3210 putative sugar kinase transferase protein YP_001789428.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold domain protein; KEGG: mca:MCA0985 sensory box protein YP_001789429.1 PFAM: glutamine amidotransferase class-II; KEGG: mpt:Mpe_A3628 putative glutamine amidotransferase YP_001789430.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpt:Mpe_A0164 putative electron transfer oxidoreductase YP_001789431.1 PFAM: Patatin; KEGG: mpt:Mpe_A0430 patatin-like phospholipase YP_001789432.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pna:Pnap_0226 periplasmic binding protein/LacI transcriptional regulator YP_001789433.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential YP_001789434.1 PFAM: cytochrome c class I; KEGG: mpt:Mpe_A0432 cytochrome c YP_001789435.1 KEGG: mpt:Mpe_A0435 hypothetical protein YP_001789436.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ YP_001789437.1 PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: mpt:Mpe_A0437 hypothetical protein YP_001789438.1 PFAM: protein of unknown function DUF161; KEGG: mpt:Mpe_A3339 conserved hypothetical protein VC0940 YP_001789439.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: eba:ebA3865 hypothetical protein YP_001789440.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein YP_001789441.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_001789442.1 KEGG: azo:azo3910 hypothetical secreted protein YP_001789443.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_1453 transcriptional regulator, LysR family YP_001789444.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_1454 short-chain dehydrogenase/reductase SDR YP_001789445.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pol:Bpro_1455 TRAP dicarboxylate transporter, DctP subunit YP_001789446.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dac:Daci_0730 tripartite ATP-independent periplasmic transporter DctQ component YP_001789447.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pol:Bpro_1457 TRAP dicarboxylate transporter-DctM subunit YP_001789448.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pol:Bpro_1458 xylose isomerase-like TIM barrel YP_001789449.1 PFAM: putative sugar-binding domain protein; KEGG: vei:Veis_2041 transcriptional regulator, DeoR family YP_001789450.1 KEGG: vei:Veis_2042 sugar-phosphate isomerases, RpiB/LacA/LacB family; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase YP_001789451.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone YP_001789452.1 TIGRFAM: transaldolase; transketolase; PFAM: Transaldolase; Transketolase domain protein; Transketolase central region; KEGG: azo:azo2836 transketolase YP_001789453.1 PFAM: regulatory protein TetR; KEGG: pol:Bpro_4502 transcriptional regulator, TetR family YP_001789454.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: aav:Aave_0752 tripartite ATP-independent periplasmic transporter, DctQ component YP_001789455.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pol:Bpro_4500 TRAP dicarboxylate transporter-DctM subunit YP_001789456.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pol:Bpro_4499 TRAP dicarboxylate transporter, DctP subunit YP_001789457.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_001789458.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; Xylose isomerase domain protein TIM barrel; KEGG: pna:Pnap_1560 4-hydroxyphenylpyruvate dioxygenase YP_001789459.1 PFAM: UBA/THIF-type NAD/FAD binding protein; Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: pna:Pnap_1561 shikimate dehydrogenase YP_001789460.1 PFAM: CBS domain containing protein; KEGG: pna:Pnap_1409 putative signal-transduction protein with CBS domains YP_001789461.1 PFAM: Pirin domain protein; KEGG: mpt:Mpe_A0588 putative pirin-like protein YP_001789462.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine YP_001789463.1 KEGG: mpt:Mpe_A3573 putative proline-rich protein YP_001789464.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mpt:Mpe_A3572 putative long-chain-fatty-acid--CoA ligase protein YP_001789465.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: pol:Bpro_4544 NAD(P) transhydrogenase, beta subunit YP_001789466.1 KEGG: mpt:Mpe_A3570 NAD(P) transhydrogenase, subunit alpha part 2 YP_001789467.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: pna:Pnap_3800 NAD(P)(+) transhydrogenase (AB-specific) YP_001789468.1 PFAM: NUDIX hydrolase; KEGG: mpt:Mpe_A3567 hypothetical protein YP_001789469.1 PFAM: glycosyl transferase family 9; KEGG: reu:Reut_B4386 lipopolysaccharide heptosyltransferase II YP_001789470.1 SMART: zinc finger CDGSH-type domain protein; KEGG: mag:amb4007 hypothetical protein YP_001789471.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_001789472.1 KEGG: pna:Pnap_1118 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969 YP_001789473.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pna:Pnap_1119 glyoxalase/bleomycin resistance protein/dioxygenase YP_001789474.1 KEGG: pna:Pnap_1120 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_001789475.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: rme:Rmet_1059 transferase hexapeptide repeat YP_001789476.1 PFAM: conserved hypothetical protein; KEGG: dac:Daci_3139 hypothetical protein YP_001789477.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pna:Pnap_1122 L-carnitine dehydratase/bile acid-inducible protein F YP_001789478.1 PFAM: pyruvate carboxyltransferase; KEGG: pna:Pnap_1123 pyruvate carboxyltransferase YP_001789479.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_6279 transcriptional regulator, LysR family YP_001789480.1 TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: sme:SMb20586 putative transcriptional regulator, IclR family protein YP_001789481.1 catalyzes the formation of protocatechuate from 4-hydroxybenzoate YP_001789482.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: bpt:Bpet3318 putative sulfate permease YP_001789483.1 KEGG: mpt:Mpe_A2032 hypothetical protein YP_001789484.1 PFAM: thioesterase superfamily protein; KEGG: azo:azo2495 probable thiesterase YP_001789485.1 PFAM: pyruvate carboxyltransferase; KEGG: pol:Bpro_4514 pyruvate carboxyltransferase YP_001789486.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: scl:sce1470 MATE efflux family protein YP_001789487.1 KEGG: gvi:glr1249 hypothetical protein YP_001789488.1 PFAM: protein of unknown function DUF1653; KEGG: xcv:XCV3888 hypothetical protein YP_001789489.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: par:Psyc_0360 hypothetical protein YP_001789490.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: pmy:Pmen_2247 chromate transporter, chromate ion transporter (CHR) family YP_001789491.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: azc:AZC_3546 hypothetical protein YP_001789492.1 PFAM: protein of unknown function DUF336; KEGG: bmu:Bmul_1674 protein of unknown function DUF336 YP_001789493.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: bpd:BURPS668_0335 N-acylglucosamine 2-epimerase family protein YP_001789494.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bxe:Bxe_A4284 transcriptional regulator, LacI family YP_001789497.1 PFAM: YceI family protein; KEGG: pna:Pnap_3578 YceI family protein YP_001789498.1 PFAM: YceI family protein; KEGG: aav:Aave_3506 YceI family protein YP_001789499.1 PFAM: cytochrome B561; KEGG: mpt:Mpe_A3506 putative cytochrome b-561 membrane protein YP_001789500.1 PFAM: regulatory protein MerR; KEGG: mpt:Mpe_A0238 hypothetical protein YP_001789501.1 PFAM: glutathione peroxidase; KEGG: mpt:Mpe_A0237 putative glutathione peroxidase transmembrane protein YP_001789502.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mpt:Mpe_A0236 putative dehydrogenase YP_001789503.1 PFAM: protein of unknown function DUF1365; KEGG: mpt:Mpe_A0235 hypothetical protein YP_001789504.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mpt:Mpe_A0234 cyclopropane-fatty-acyl-phospholipid synthase YP_001789505.1 KEGG: mpt:Mpe_A0233 hypothetical protein YP_001789506.1 KEGG: mpt:Mpe_A0232 sodium:galactoside symporter family protein YP_001789507.1 KEGG: mpt:Mpe_A0231 lipoprotein, putative YP_001789508.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_1455 short-chain dehydrogenase/reductase SDR YP_001789509.1 KEGG: mpt:Mpe_A0229 hypothetical protein YP_001789510.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: mpt:Mpe_A0227 transport protein YP_001789511.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: mpt:Mpe_A0226 putative PTS system, EIIa component YP_001789512.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: mpt:Mpe_A0225 putative nitrogen regulatory IIA protein YP_001789513.1 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system YP_001789514.1 PFAM: ferric-uptake regulator; KEGG: mpt:Mpe_A0223 transcriptional regulator YP_001789515.1 PFAM: SmpA/OmlA domain protein; KEGG: mpt:Mpe_A0222 small protein A (tmRNA-binding)-like protein YP_001789516.1 PFAM: dihydrodipicolinate reductase; KEGG: pna:Pnap_3789 dihydrodipicolinate reductase YP_001789517.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mpt:Mpe_A0220 putative transport-related membrane protein YP_001789518.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mpt:Mpe_A0219 putative transport-related membrane protein YP_001789519.1 TIGRFAM: leucyl-tRNA synthetase; KEGG: pol:Bpro_4605 leucyl-tRNA synthetase YP_001789520.1 PFAM: Rare lipoprotein B; KEGG: mpt:Mpe_A0217 putative lipoprotein B precursor YP_001789521.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA YP_001789522.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring YP_001789523.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth YP_001789524.1 TIGRFAM: methyltransferase FkbM family; KEGG: nmu:Nmul_A1173 methyltransferase FkbM YP_001789525.1 PFAM: Fimbrial protein pilin; KEGG: mca:MCA1510 fimbrial protein YP_001789526.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mca:MCA1511 TPR domain protein YP_001789527.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mca:MCA1512 TPR domain protein YP_001789529.1 PFAM: O-antigen polymerase; KEGG: mpt:Mpe_A0063 O-antigen polymerase YP_001789530.1 PFAM: AAA-4 family protein; KEGG: neu:NE0383 hypothetical protein YP_001789531.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: mpt:Mpe_A0062 molybdenum cofactor biosynthesis protein YP_001789532.1 PFAM: peptidase M48 Ste24p; KEGG: mpt:Mpe_A0060 conserved hypothetical signal peptide protein YP_001789533.1 PFAM: membrane protein of unknown function; KEGG: mpt:Mpe_A0059 putative transmembrane protein YP_001789534.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle YP_001789535.1 KEGG: pna:Pnap_3953 succinyl-CoA synthetase, beta subunit; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein YP_001789536.1 PFAM: regulatory protein RecX; KEGG: pol:Bpro_4684 regulatory protein RecX YP_001789537.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs YP_001789538.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mpt:Mpe_A0076 response regulator transcription regulatory protein YP_001789539.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: mpt:Mpe_A0077 putative transmembrane sensor histidine kinase transcription regulator protein YP_001789540.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: mpt:Mpe_A0079 putative rod shape-determining transmembrane protein YP_001789541.1 KEGG: mpt:Mpe_A0080 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_001789542.1 TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; KEGG: mpt:Mpe_A0081 putative rod shape-determining MreD transmembrane protein YP_001789543.1 TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: mpt:Mpe_A0082 putative rod shape-determining MreC transmembrane protein YP_001789544.1 functions in MreBCD complex in some organisms YP_001789545.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain YP_001789546.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_001789548.1 KEGG: mpt:Mpe_A2203 putative chaperone protein YP_001789549.1 KEGG: dar:Daro_4100 hypothetical protein YP_001789550.1 KEGG: mpt:Mpe_A3644 hypothetical protein YP_001789551.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_1896 drug resistance transporter, Bcr/CflA subfamily YP_001789552.1 PFAM: carbonic anhydrase; KEGG: dar:Daro_3922 carbonic anhydrase, eukaryotic YP_001789553.1 MraZ; UPF0040; crystal structure shows similarity to AbrB YP_001789554.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: mpt:Mpe_A0454 S-adenosyl-methyltransferase MraW YP_001789555.1 PFAM: cell division protein FtsL; KEGG: pol:Bpro_1068 cell division protein, FtsL -like YP_001789556.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: mpt:Mpe_A0456 peptidoglycan glycosyltransferase YP_001789557.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate YP_001789558.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mpt:Mpe_A0458 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamino pimelate--D-alanyl-D-alanyl ligase YP_001789559.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_001789560.1 TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mpt:Mpe_A0460 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_001789561.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: mpt:Mpe_A0461 cell division protein FtsW YP_001789562.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis YP_001789563.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis YP_001789564.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_001789565.1 PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: mpt:Mpe_A0465 cell division protein FtsQ YP_001789566.1 PFAM: cell division protein FtsA; KEGG: mpt:Mpe_A0466 putative cell division protein FtsA YP_001789567.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: mpt:Mpe_A0467 cell division protein FtsZ YP_001789568.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis YP_001789569.1 KEGG: mpt:Mpe_A0469 hypothetical protein YP_001789570.1 KEGG: xcv:XCV1929 putative C-di-GMP phosphodiesterase or signal transduction protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_001789571.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity YP_001789572.1 involved in de novo purine biosynthesis YP_001789573.1 PFAM: helix-turn-helix Fis-type; KEGG: pol:Bpro_1131 transcriptional regulator, fis family YP_001789574.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; dihydroorotate dehydrogenase; KEGG: mpt:Mpe_A0486 tRNA-dihydrouridine synthase B YP_001789575.1 KEGG: mpt:Mpe_A0487 putative transmembrane protein YP_001789576.1 PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: azo:azo3546 probable carboxypeptidase TAQ YP_001789577.1 KEGG: pcr:Pcryo_1046 protein of unknown function DUF11 YP_001789578.1 KEGG: xau:Xaut_4604 hypothetical protein YP_001789579.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate YP_001789580.1 PFAM: protein of unknown function DUF820; KEGG: hha:Hhal_1924 protein of unknown function DUF820 YP_001789581.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mpt:Mpe_A0500 hypothetical protein YP_001789582.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly YP_001789583.1 PFAM: protein of unknown function DUF815; KEGG: ajs:Ajs_0798 protein of unknown function DUF815 YP_001789584.1 PFAM: NUDIX hydrolase; KEGG: rfr:Rfer_2908 NUDIX hydrolase YP_001789585.1 PFAM: protein of unknown function DUF329; KEGG: ajs:Ajs_0800 protein of unknown function DUF329 YP_001789586.1 PFAM: protein of unknown function DUF1342; KEGG: mpt:Mpe_A0505 hypothetical protein YP_001789587.1 KEGG: mpt:Mpe_A0506 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_001789588.1 PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: mpt:Mpe_A0507 signal peptidase YP_001789589.1 PFAM: type II secretion system protein; KEGG: mpt:Mpe_A0508 pilus tip-associated protein YP_001789590.1 KEGG: mpt:Mpe_A0509 pilus biogenesis ATPase; TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase YP_001789591.1 molecular chaperone YP_001789592.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages YP_001789593.1 KEGG: mpt:Mpe_A3159 hypothetical protein YP_001789594.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpt:Mpe_A3158 hypothetical protein YP_001789595.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mpt:Mpe_A0111 single-strand binding protein YP_001789596.1 KEGG: mpt:Mpe_A0108 putative ATP-dependent DNA helicase protein; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases YP_001789597.1 PFAM: Patatin; KEGG: mpt:Mpe_A0078 alpha-beta hydrolase superfamily esterase-like protein YP_001789599.1 KEGG: mpt:Mpe_A0107 hypothetical protein YP_001789600.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: rfr:Rfer_2975 acetate kinase YP_001789601.1 PFAM: basic membrane lipoprotein; KEGG: aha:AHA_0219 membrane lipoprotein YP_001789602.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmw:Mmwyl1_0633 ABC transporter related YP_001789603.1 PFAM: inner-membrane translocator; KEGG: mes:Meso_3653 inner-membrane translocator YP_001789604.1 PFAM: inner-membrane translocator; KEGG: atc:AGR_C_207 sugar ABC transporter, permease protein YP_001789605.1 PFAM: Aldehyde Dehydrogenase_; KEGG: rsh:Rsph17029_2952 aldehyde dehydrogenase YP_001789606.1 PFAM: Saccharopine dehydrogenase; KEGG: pol:Bpro_4331 saccharopine dehydrogenase YP_001789607.1 KEGG: afw:Anae109_0266 response regulator receiver YP_001789609.1 KEGG: bbt:BBta_6384 hypothetical protein YP_001789610.1 PFAM: protein of unknown function DUF847; KEGG: xau:Xaut_3175 protein of unknown function DUF847 YP_001789611.1 KEGG: sse:Ssed_3749 hypothetical protein YP_001789612.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mpt:Mpe_A0515 hypothetical protein YP_001789613.1 hydrolyzes diadenosine polyphosphate YP_001789614.1 TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; YbaK/prolyl-tRNA synthetase associated region; KEGG: mpt:Mpe_A0517 prolyl-tRNA synthetase YP_001789615.1 PFAM: Lytic transglycosylase catalytic; KEGG: aav:Aave_3669 lytic transglycosylase, catalytic YP_001789616.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: mpt:Mpe_A0519 putative flavoprotein YP_001789617.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: rso:RSc2904 hypothetical protein YP_001789618.1 KEGG: mpt:Mpe_A0521 hypothetical protein YP_001789619.1 TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: vei:Veis_1555 modification methylase, HemK family YP_001789620.1 TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: mpt:Mpe_A0523 peptide chain release factor 1 YP_001789621.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins YP_001789622.1 KEGG: mpt:Mpe_A0525 hypothetical protein YP_001789623.1 PFAM: beta-lactamase domain protein; KEGG: ajs:Ajs_0515 beta-lactamase domain protein YP_001789624.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_001789625.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: mpt:Mpe_A0663 urease accessory protein YP_001789626.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rso:RSc0349 putative bacterioferritin-associated ferredoxin protein YP_001789627.1 TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: pol:Bpro_3046 bacterioferritin YP_001789628.1 PFAM: peptidase S49; KEGG: mpt:Mpe_A0660 putative protease transmembrane protein YP_001789629.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mpt:Mpe_A0659 hypothetical protein YP_001789630.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mpt:Mpe_A0658 haloacid dehalogenase-like hydrolase YP_001789631.1 KEGG: mpt:Mpe_A0657 putative ribosomal large subunit pseudouridine synthase C protein; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase YP_001789632.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: mpt:Mpe_A0656 putative ribonuclease E (RNase E) protein YP_001789633.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: mpt:Mpe_A0655 glycosyl hydrolase, family 3 YP_001789634.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids YP_001789635.1 involved in the de novo synthesis of pyridoxine (Vitamin B6) YP_001789636.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: mpt:Mpe_A0652 putative DNA repair protein RecO YP_001789637.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; KEGG: mpt:Mpe_A0651 putative GTP-binding protein YP_001789638.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: mpt:Mpe_A0650 ribonuclease III YP_001789639.1 KEGG: mpt:Mpe_A0649 hypothetical protein YP_001789640.1 KEGG: mpt:Mpe_A0648 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein YP_001789641.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_001789642.1 KEGG: mpt:Mpe_A0645 subfamily S1C unassigned peptidase; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_001789643.1 KEGG: mpt:Mpe_A0644 putative sigma E factor regulatory protein YP_001789644.1 PFAM: Anti sigma-E protein RseA family protein; KEGG: mpt:Mpe_A0643 putative transmembrane sigma-E factor negative regulatory transcription regulator protein YP_001789645.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response YP_001789646.1 KEGG: mpt:Mpe_A0641 hypothetical protein YP_001789647.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: mpt:Mpe_A0640 putative 3-oxoacyl-(acyl-carrier-protein) synthase II YP_001789648.1 carries the fatty acid chain in fatty acid biosynthesis YP_001789649.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mpt:Mpe_A0638 3-oxoacyl-(acyl-carrier protein) reductase YP_001789650.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: mpt:Mpe_A0637 putative malonyl CoA-(acyl-carrier-protein) transacylase YP_001789651.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs YP_001789652.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY YP_001789653.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_001789654.1 PFAM: protein of unknown function DUF177; KEGG: aav:Aave_1180 protein of unknown function DUF177 YP_001789655.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: mpt:Mpe_A0633 hypothetical protein YP_001789656.1 KEGG: mpt:Mpe_A0632 putative transmembrane protein YP_001789657.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mpt:Mpe_A0631 putative ATP-dependent RNA helicase 2 YP_001789658.1 PFAM: glycosyl transferase family 4; KEGG: mpt:Mpe_A0630 putative undecaprenyl phosphate N-acetylglucosaminyltransferase YP_001789659.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: eba:ebA2278 putative dTDP-D-glucose 4,6-dehydratase YP_001789660.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: dac:Daci_1276 dTDP-4-dehydrorhamnose reductase YP_001789661.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mpt:Mpe_A0626 glucose-1-phosphate thymidylyltransferase YP_001789662.1 KEGG: rme:Rmet_2732 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_001789663.1 KEGG: mpt:Mpe_A0629 mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein YP_001789664.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: ret:RHE_CH00763 GDP-L-fucose synthase protein YP_001789666.1 KEGG: cch:Cag_0660 hypothetical protein YP_001789667.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: mpt:Mpe_A2731 GDP-mannose 4,6-dehydratase YP_001789668.1 PFAM: protein of unknown function DUF820; KEGG: pna:Pnap_0294 protein of unknown function DUF820 YP_001789669.1 PFAM: glycosyl transferase group 1; KEGG: cvi:CV_0515 probable glycosyltransferase YP_001789670.1 PFAM: PilT protein domain protein; KEGG: pna:Pnap_4802 PilT protein domain protein YP_001789671.1 KEGG: pna:Pnap_4803 hypothetical protein YP_001789672.1 PFAM: Hemolysin-type calcium-binding region; Na-Ca exchanger/integrin-beta4; KEGG: ret:RHE_CH00724 rhizobiocin/RTX toxin and hemolysin-type calcium binding protein YP_001789673.1 KEGG: cpy:Cphy_0396 hypothetical protein YP_001789674.1 KEGG: pgi:PG0119 glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF YP_001789675.1 PFAM: glycosyl transferase group 1; KEGG: azo:azo3272 glycosyltransferase YP_001789676.1 KEGG: saz:Sama_2255 hypothetical protein YP_001789677.1 PFAM: polysaccharide biosynthesis protein; KEGG: mmw:Mmwyl1_0834 polysaccharide biosynthesis protein YP_001789678.1 catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis YP_001789679.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: sun:SUN_1549 hypothetical protein YP_001789680.1 catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis YP_001789681.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: pau:PA14_23380 UDP-N-acetyl-D-mannosaminuronate dehydrogenase YP_001789682.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: esa:ESA_03772 hypothetical protein YP_001789683.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: rfr:Rfer_1234 lipopolysaccharide biosynthesis YP_001789685.1 KEGG: pna:Pnap_4284 hypothetical protein YP_001789686.1 PFAM: DNA polymerase beta domain protein region; KEGG: aeh:Mlg_0863 DNA polymerase, beta domain protein region YP_001789687.1 KEGG: aeh:Mlg_0864 hypothetical protein YP_001789688.1 PFAM: polysaccharide export protein; KEGG: bte:BTH_II1986 polysaccharide biosynthesis protein, putative YP_001789689.1 PFAM: multicopper oxidase type 2; KEGG: ppf:Pput_2532 multicopper oxidase, type 2 YP_001789690.1 PFAM: cytochrome c class I; electron transport protein SCO1/SenC; KEGG: pfo:Pfl_2002 electron transport protein SCO1/SenC YP_001789691.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; KEGG: mpt:Mpe_A2628 chorismate binding enzyme YP_001789692.1 KEGG: mpt:Mpe_A2611 ATP:dephospho-CoA triphosphoribosyl transferase YP_001789693.1 PFAM: protein of unknown function DUF583; KEGG: xcb:XC_0499 hypothetical protein YP_001789695.1 KEGG: lma:LmjF35.0290 hypothetical protein, conserved YP_001789696.1 TIGRFAM: small GTP-binding protein; PFAM: protein of unknown function ATP binding; KEGG: noc:Noc_0133 conserved hypothetical ATP binding protein YP_001789697.1 KEGG: noc:Noc_0134 hypothetical protein YP_001789698.1 PFAM: Roadblock/LC7 family protein; KEGG: noc:Noc_1488 Roadblock/LC7 YP_001789699.1 KEGG: pna:Pnap_2812 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001789700.1 KEGG: noc:Noc_1486 ABC-type phosphate/phosphonate transport system periplasmic component YP_001789701.1 KEGG: lma:LmjF35.0290 hypothetical protein, conserved YP_001789702.1 KEGG: pmy:Pmen_0549 sporulation domain protein YP_001789703.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: abo:ABO_1476 ammonium transporter, putative YP_001789704.1 TIGRFAM: cysteine synthase; cysteine synthase B; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mpt:Mpe_A1132 cysteine synthase B YP_001789705.1 PFAM: Rhomboid family protein; KEGG: mpt:Mpe_A1130 integral membrane protein YP_001789706.1 PFAM: PDZ/DHR/GLGF domain protein; KEGG: mpt:Mpe_A1129 putative serine protease YP_001789707.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: mpt:Mpe_A1128 putative oxidoreductase protein YP_001789708.1 catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose YP_001789709.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_001789710.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: mpt:Mpe_A3026 putative transmembrane protein YP_001789711.1 KEGG: mpt:Mpe_A3024 hypothetical protein YP_001789712.1 PFAM: protein of unknown function UPF0118; KEGG: mpt:Mpe_A3023 putative permease transmembrane transport protein YP_001789713.1 KEGG: mpt:Mpe_A3022 hypothetical protein; TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA; SMART: AAA ATPase YP_001789714.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mpt:Mpe_A3021 hypothetical protein YP_001789715.1 KEGG: mpt:Mpe_A3020 putative polynucleotide adenylyltransferase protein; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region YP_001789716.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: mpt:Mpe_A3019 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase YP_001789717.1 PFAM: protein of unknown function DUF47; KEGG: mpt:Mpe_A3016 hypothetical protein YP_001789718.1 PFAM: phosphate transporter; KEGG: dac:Daci_5348 phosphate transporter YP_001789719.1 KEGG: mpt:Mpe_A1102 hypothetical protein YP_001789720.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpt:Mpe_A1103 putative phosphinothricin acetyltransferase YP_001789721.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity YP_001789722.1 Essential for efficient processing of 16S rRNA YP_001789723.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA YP_001789724.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site YP_001789725.1 PFAM: NUDIX hydrolase; KEGG: mpt:Mpe_A1108 hypothetical protein YP_001789726.1 KEGG: mpt:Mpe_A1109 putative cobalamin biosynthesis transmembrane protein YP_001789727.1 PFAM: protein of unknown function DUF599; KEGG: mpt:Mpe_A2884 hypothetical protein YP_001789728.1 PFAM: Pirin domain protein; Cupin 2 conserved barrel domain protein; KEGG: mpt:Mpe_A2889 putative pirin-like protein YP_001789729.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A2890 putative transcriptional regulator transcription regulator protein YP_001789730.1 PFAM: glutamyl-tRNA synthetase class Ic; KEGG: mpt:Mpe_A2900 glutamate--tRNA ligase YP_001789731.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: pna:Pnap_1619 peptidylprolyl isomerase, FKBP-type YP_001789732.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001789733.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway YP_001789734.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: mpt:Mpe_A2694 putative FkpB-type peptidyl-prolyl cis-trans isomerase YP_001789735.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase YP_001789736.1 PFAM: Smr protein/MutS2; KEGG: pol:Bpro_0947 Smr protein/MutS2 YP_001789737.1 PFAM: globin; KEGG: ajs:Ajs_3454 globin YP_001789738.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ajs:Ajs_2277 cobyrinic acid a,c-diamide synthase YP_001789739.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mpt:Mpe_A2699 GGDEF domain containing protein YP_001789740.1 PFAM: MCP methyltransferase CheR-type; KEGG: mpt:Mpe_A2700 methylase of methyl-accepting chemotaxis protein YP_001789741.1 stimulates methylation of MCP proteins; catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors YP_001789742.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: mpt:Mpe_A2702 chemotaxis response regulator YP_001789743.1 KEGG: ajs:Ajs_0921 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001789744.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine YP_001789745.1 KEGG: mpt:Mpe_A2705 tRNA nucleotidyltransferase; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 YP_001789746.1 PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: mpt:Mpe_A2706 hypothetical protein YP_001789747.1 SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mpt:Mpe_A2707 putative protein kinase YP_001789748.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: mpt:Mpe_A2708 hypothetical protein YP_001789749.1 KEGG: dac:Daci_2036 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969 YP_001789750.1 KEGG: bxe:Bxe_C0660 putative hydrolase YP_001789751.1 PFAM: conserved hypothetical protein; KEGG: ajs:Ajs_3546 uncharacterized protein UPF0065 YP_001789752.1 PFAM: conserved hypothetical protein; KEGG: dac:Daci_4275 hypothetical protein YP_001789753.1 KEGG: dac:Daci_5627 porin, gram-negative type YP_001789754.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: dac:Daci_4272 SMP-30/gluconolaconase/LRE domain protein YP_001789755.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_B0346 probable extra-cytoplasmic solute receptor YP_001789756.1 KEGG: acr:Acry_2893 hypothetical protein YP_001789757.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: dac:Daci_4276 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_001789758.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: dac:Daci_4277 dimethylmenaquinone methyltransferase YP_001789759.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_B4610 hypothetical protein YP_001789760.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfl:PFL_2331 transcriptional regulator, LysR family YP_001789761.1 KEGG: mmw:Mmwyl1_1944 hypothetical protein YP_001789762.1 KEGG: kpn:KPN_01707 hypothetical protein YP_001789763.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: rso:RSc0625 probable transcription regulator protein YP_001789764.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: mpt:Mpe_A0752 hypothetical protein YP_001789765.1 KEGG: nwi:Nwi_0459 hypothetical protein YP_001789766.1 TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: pna:Pnap_2096 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001789767.1 Essential for recycling GMP and indirectly, cGMP YP_001789768.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits YP_001789769.1 KEGG: mpt:Mpe_A2721 GTP diphosphokinase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region YP_001789770.1 TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mpt:Mpe_A2723 transcription elongation factor YP_001789771.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; response regulator receiver; KEGG: reu:Reut_B5042 excisionase/Xis, DNA-binding YP_001789772.1 PFAM: response regulator receiver; KEGG: dac:Daci_0738 response regulator receiver protein YP_001789773.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mpt:Mpe_A2643 putative two component response regulator protein YP_001789774.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A2642 putative two component sensor histidine kinase protein YP_001789775.1 PFAM: protein of unknown function DUF1289; KEGG: mpt:Mpe_A2641 hypothetical protein YP_001789776.1 PFAM: protein of unknown function DUF937; KEGG: gme:Gmet_2744 protein of unknown function DUF937 YP_001789777.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001789778.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: mpt:Mpe_A2638 putative phosphoribosylglycinamide formyltransferase protein YP_001789779.1 PFAM: Fmu (Sun) domain protein; KEGG: mpt:Mpe_A1114 NOL1/NOP2/Sun family protein YP_001789780.1 PFAM: fatty acid desaturase; KEGG: mpt:Mpe_A1115 putative stearoyl-CoA desaturase oxidoreductase protein YP_001789781.1 KEGG: mpt:Mpe_A2746 hypothetical protein YP_001789782.1 PFAM: peptidase M23B; KEGG: mpt:Mpe_A2745 putative transmembrane protein YP_001789783.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: mpt:Mpe_A2744 preprotein translocase SecA subunit YP_001789784.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate YP_001789785.1 TIGRFAM: outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; von Willebrand factor type A; Na-Ca exchanger/integrin-beta4; KEGG: pfo:Pfl_1463 VCBS YP_001789786.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bvi:Bcep1808_3674 L-carnitine dehydratase/bile acid-inducible protein F YP_001789787.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ajs:Ajs_0858 glycerophosphodiester phosphodiesterase YP_001789788.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: mpt:Mpe_A2738 putative oxidoreductase protein YP_001789789.1 KEGG: mpt:Mpe_A1948 hypothetical protein YP_001789790.1 PFAM: ribosomal protein L33; KEGG: dar:Daro_3144 50S ribosomal protein L33 YP_001789791.1 required for 70S ribosome assembly YP_001789792.1 KEGG: mpt:Mpe_A1118 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001789793.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mpt:Mpe_A1119 catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein) YP_001789794.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: mpt:Mpe_A1120 putative cell division FtsK transmembrane protein YP_001789795.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: mpt:Mpe_A1121 outer membrane lipoprotein carrier protein LolA YP_001789796.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mpt:Mpe_A1122 recombination factor protein RarA YP_001789797.1 PFAM: inner-membrane translocator; KEGG: mpt:Mpe_A1123 putative amino-acid transmembrane ABC transporter protein YP_001789798.1 PFAM: inner-membrane translocator; KEGG: pol:Bpro_3795 inner-membrane translocator YP_001789799.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A1125 putative ABC transporter ATP-binding protein YP_001789800.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A1126 putative amino acid ATP-binding ABC transporter protein YP_001789801.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate YP_001789802.1 KEGG: mpt:Mpe_A3002 putative porphobilinogen deaminase protein; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase YP_001789803.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: mpt:Mpe_A3001 uroporphyrinogen-III synthase YP_001789804.1 PFAM: protein of unknown function DUF513 hemX; KEGG: mpt:Mpe_A3000 putative uroporphyrin-III methylase YP_001789805.1 PFAM: HemY domain protein; KEGG: mpt:Mpe_A2999 putative porphyrin biosynthesis-related protein YP_001789806.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: eba:ebA495 phage-related integrase YP_001789807.1 PFAM: integrase family protein; KEGG: eba:ebA497 phage-related integrase YP_001789808.1 PFAM: integrase family protein; KEGG: eba:ebA499 phage-related integrase YP_001789809.1 KEGG: nha:Nham_1149 hypothetical protein YP_001789810.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: fjo:Fjoh_3576 DEAD/DEAH box helicase domain protein YP_001789811.1 KEGG: mma:MM_2448 transposase YP_001789812.1 KEGG: vei:Veis_4435 transposase YP_001789813.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mlo:mlr9324 integrase/recombinase YP_001789814.1 PFAM: integrase family protein; KEGG: eba:p2A219 putative integrase YP_001789815.1 PFAM: integrase family protein; KEGG: eba:ebA499 phage-related integrase YP_001789816.1 PFAM: transposase IS3/IS911 family protein; KEGG: pol:Bpro_4705 hypothetical protein YP_001789817.1 PFAM: Integrase catalytic region; KEGG: pol:Bpro_4706 integrase, catalytic region YP_001789818.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mpt:Mpe_A1664 single-strand binding protein YP_001789819.1 PFAM: protein of unknown function DUF932; KEGG: mpt:Mpe_A1665 putative F plasmid protein YP_001789820.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: abo:ABO_2074 ParA family protein YP_001789821.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KorB domain protein; KEGG: ajs:Ajs_4306 ParB-like partition proteins YP_001789823.1 KEGG: bxe:Bxe_C0462 putative DNA relaxase/nickase, TraS/VirD2-like YP_001789825.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: rfr:Rfer_2534 NADP oxidoreductase, coenzyme F420-dependent YP_001789826.1 PFAM: phospholipase/Carboxylesterase; KEGG: mmw:Mmwyl1_0129 phospholipase/carboxylesterase YP_001789827.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_0990 ABC transporter related YP_001789828.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_0989 ABC transporter related YP_001789829.1 PFAM: inner-membrane translocator; KEGG: pol:Bpro_0988 inner-membrane translocator YP_001789830.1 PFAM: inner-membrane translocator; KEGG: pol:Bpro_0987 inner-membrane translocator YP_001789831.1 PFAM: Extracellular ligand-binding receptor; KEGG: pol:Bpro_0986 extracellular ligand-binding receptor YP_001789832.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: pol:Bpro_0985 Rieske (2Fe-2S) region YP_001789833.1 PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: aav:Aave_0166 aromatic-ring-hydroxylating dioxygenase, beta subunit YP_001789834.1 PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: pol:Bpro_0983 Rieske (2Fe-2S) region YP_001789835.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pol:Bpro_0982 fumarylacetoacetate (FAA) hydrolase YP_001789836.1 TIGRFAM: gentisate 1,2-dioxygenase; PFAM: Cupin 2 conserved barrel domain protein; KEGG: pol:Bpro_0981 gentisate 1,2-dioxygenase YP_001789837.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pol:Bpro_0980 oxidoreductase FAD-binding region YP_001789838.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_0979 transcriptional regulator, LysR family YP_001789839.1 PFAM: helix-turn-helix Fis-type; GAF domain protein; KEGG: pol:Bpro_5567 putative transcriptional regulator, fis family YP_001789840.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: pde:Pden_0181 glucose-methanol-choline oxidoreductase YP_001789841.1 PFAM: Aldehyde Dehydrogenase_; KEGG: pde:Pden_0180 aldehyde dehydrogenase YP_001789842.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: mmr:Mmar10_0276 transcriptional regulator, LacI family YP_001789843.1 PFAM: major facilitator superfamily MFS_1; KEGG: aau:AAur_0659 putative major facilitator superfamily (MFS) transporter YP_001789844.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: rle:RL4489 putative glycosyl hydrolase YP_001789845.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_1901 TonB-dependent receptor YP_001789846.1 PFAM: alpha/beta hydrolase fold; KEGG: fre:Franean1_0952 alpha/beta hydrolase fold YP_001789847.1 KEGG: nar:Saro_1725 hypothetical protein YP_001789848.1 KEGG: bur:Bcep18194_A5004 hypothetical protein YP_001789849.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mms:mma_0247 biopolymer transport protein ExbD YP_001789850.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mpt:Mpe_A1756 biopolymer transport ExbD protein YP_001789851.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mpt:Mpe_A1755 biopolymer transport ExbB protein YP_001789852.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: mag:amb3549 periplasmic protein TonB, links inner and outer membranes YP_001789853.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pde:Pden_0188 regulatory proteins, IclR YP_001789854.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pde:Pden_0192 short-chain dehydrogenase/reductase SDR YP_001789855.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pde:Pden_0195 L-carnitine dehydratase/bile acid-inducible protein F YP_001789856.1 KEGG: pde:Pden_0194 hypothetical protein YP_001789857.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pde:Pden_0191 glyoxalase/bleomycin resistance protein/dioxygenase YP_001789858.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: reu:Reut_B5224 TRAP dicarboxylate transporter-DctP subunit YP_001789859.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vei:Veis_4815 TRAP C4-dicarboxylate transport system permease DctM subunit YP_001789860.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: mxa:MXAN_5469 male sterility protein-like protein YP_001789861.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pde:Pden_0196 short-chain dehydrogenase/reductase SDR YP_001789862.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: rha:RHA1_ro00659 possible WhiE protein YP_001789863.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pna:Pnap_2814 antibiotic biosynthesis monooxygenase YP_001789864.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: har:HEAR2599 hypothetical protein YP_001789865.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_3339 transcriptional regulator, LysR family YP_001789866.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: rso:RS05436 hypothetical protein YP_001789867.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: mpt:Mpe_A0409 hypothetical protein YP_001789868.1 KEGG: pol:Bpro_1231 beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase YP_001789869.1 KEGG: rso:RSc2253 probable 3-oxoadipate CoA-transferase subunit B protein; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase YP_001789870.1 KEGG: aav:Aave_3946 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase YP_001789871.1 PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bur:Bcep18194_A4486 intradiol ring-cleavage dioxygenase YP_001789872.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_A4487 transcriptional regulator, LysR family YP_001789873.1 PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: bam:Bamb_3334 stress responsive alpha-beta barrel domain protein YP_001789874.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: pol:Bpro_2063 iron-containing alcohol dehydrogenase YP_001789875.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rha:RHA1_ro02994 possible oxidoreductase YP_001789876.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bam:Bamb_3326 xylose isomerase domain protein TIM barrel YP_001789877.1 PFAM: oxidoreductase domain protein; dihydrodipicolinate reductase; Oxidoreductase domain; KEGG: acr:Acry_2329 inositol 2-dehydrogenase YP_001789878.1 KEGG: rha:RHA1_ro00226 ABC sugar transporter, periplasmic solute-binding protein YP_001789879.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nca:Noca_2377 ABC transporter related YP_001789880.1 PFAM: inner-membrane translocator; KEGG: pde:Pden_1034 inner-membrane translocator YP_001789881.1 KEGG: rfr:Rfer_0226 beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase YP_001789882.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: pna:Pnap_2135 3-hydroxyacyl-CoA dehydrogenase, NAD-binding YP_001789883.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bmu:Bmul_1907 L-carnitine dehydratase/bile acid-inducible protein F YP_001789884.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rme:Rmet_5908 acyl-CoA dehydrogenase-like protein YP_001789885.1 PFAM: cytochrome c class I; KEGG: gtn:GTNG_2417 membrane-attached cytochrome c550 YP_001789886.1 PFAM: Pyrrolo-quinoline quinone; KEGG: bbt:BBta_2326 putative quinoprotein YP_001789887.1 KEGG: mpt:Mpe_A1596 hypothetical protein YP_001789888.1 PFAM: Pyrrolo-quinoline quinone; KEGG: mpt:Mpe_A1595 putative alcohol dehydrogenase YP_001789889.1 PFAM: luciferase family protein; KEGG: pde:Pden_0203 luciferase family protein YP_001789890.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: nar:Saro_3612 flavin reductase domain protein, FMN-binding YP_001789891.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: pap:PSPA7_0941 transcriptional regulator AcoR YP_001789892.1 KEGG: stp:Strop_1877 GTP cyclohydrolase II; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II YP_001789893.1 PFAM: Aldehyde Dehydrogenase_; KEGG: pol:Bpro_0086 aldehyde dehydrogenase YP_001789894.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ajs:Ajs_2810 electron transfer flavoprotein beta-subunit YP_001789895.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: ajs:Ajs_2809 electron transfer flavoprotein, alpha subunit YP_001789896.1 KEGG: pdi:BDI_2988 periplasmic component of the Tol biopolymer transport system YP_001789897.1 KEGG: mpt:Mpe_A1675 hypothetical protein YP_001789898.1 PFAM: OmpA/MotB domain protein; KEGG: mpt:Mpe_A1676 hypothetical protein YP_001789899.1 PFAM: TRAG family protein; KEGG: bxe:Bxe_C0458 putative type IV secretory pathway protein VirD4 YP_001789900.1 TIGRFAM: P-type DNA transfer ATPase VirB11; PFAM: type II secretion system protein E; KEGG: mpt:Mpe_A1678 type IV secretory pathway, VirB11 component YP_001789901.1 PFAM: conjugation TrbI family protein; KEGG: mpt:Mpe_A1679 type IV secretory pathway, VirB10 component YP_001789902.1 PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: mpt:Mpe_A1680 type IV secretory pathway, VirB9 component YP_001789903.1 PFAM: VirB8 family protein; KEGG: mpt:Mpe_A1681 type IV secretory pathway, VirB8 component YP_001789904.1 PFAM: type IV secretion system family protein; KEGG: bxe:Bxe_C0452 putative type IV secretion system protein VirB5/TraF YP_001789905.1 PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: bxe:Bxe_A2654 putative type IV secretion system protein VirB6/TraH YP_001789907.1 TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE TrbE VirB component of type IV transporter system; KEGG: bxe:Bxe_C0450 putative type IV secretion system protein VirB4/TraE YP_001789908.1 PFAM: type IV secretory pathway VirB3 family protein; KEGG: bch:Bcen2424_3314 type IV secretory pathway, VirB3 family protein YP_001789909.1 PFAM: Conjugal transfer protein TrbC; KEGG: bcs:BCAN_B0071 TraC protein YP_001789910.1 PFAM: Lytic transglycosylase catalytic; KEGG: bmu:Bmul_3753 lytic transglycosylase catalytic YP_001789911.1 KEGG: bxe:Bxe_A1752 hypothetical protein YP_001789912.1 PFAM: regulatory protein LuxR; KEGG: mpt:Mpe_A1685 hypothetical protein YP_001789914.1 KEGG: mpt:Mpe_A1683 hypothetical protein YP_001789915.1 PFAM: fatty acid desaturase; KEGG: bxe:Bxe_A1748 putative fatty acid desaturase YP_001789916.1 KEGG: bxe:Bxe_A2669 hypothetical protein YP_001789917.1 specific inhibitor of chromosomal initiation of replication in vitro; inds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport YP_001789919.1 PFAM: Prophage CP4-57 regulatory; KEGG: hha:Hhal_1156 phage transcriptional regulator, AlpA YP_001789920.1 PFAM: Integrase catalytic region; KEGG: bxe:Bxe_B0052 putative transposase YP_001789921.1 PFAM: carbohydrate kinase FGGY; KEGG: ace:Acel_0722 carbohydrate kinase, FGGY YP_001789922.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sen:SACE_4163 zinc-binding dehydrogenase YP_001789923.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ace:Acel_0721 fructose-bisphosphate aldolase YP_001789924.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: sme:SMc02340 putative transcription regulator protein YP_001789926.1 PFAM: extracellular solute-binding protein family 1; KEGG: pde:Pden_4845 extracellular solute-binding protein, family 1 YP_001789927.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_3853 binding-protein-dependent transport systems inner membrane component YP_001789928.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_3852 binding-protein-dependent transport systems inner membrane component YP_001789929.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: csa:Csal_2614 ABC transporter related YP_001789930.1 PFAM: Dak kinase; Dak phosphatase; KEGG: ret:RHE_CH02988 dihydroxyacetone kinase protein YP_001789931.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: vei:Veis_3167 mannitol dehydrogenase, C-terminal domain YP_001789932.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: vei:Veis_3165 helix-turn-helix-domain containing protein, AraC type YP_001789933.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: aav:Aave_4624 filamentation induced by cAMP protein Fic YP_001789934.1 PFAM: integrase family protein; KEGG: dar:Daro_2526 phage integrase YP_001789936.1 KEGG: art:Arth_3462 phosphoribosyltransferase YP_001789937.1 KEGG: aeh:Mlg_1733 phosphoribosyltransferase YP_001789938.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bte:BTH_II1247 DNA-binding response regulator, LuxR family YP_001789939.1 KEGG: reh:H16_A1985 signal transduction histidine kinase containing PAS/PAC sensor domain; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001789940.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: pna:Pnap_0792 putative transcriptional regulator, Crp/Fnr family YP_001789942.1 KEGG: mpt:Mpe_A3028 hypothetical protein YP_001789943.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine YP_001789944.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation YP_001789945.1 KEGG: mpt:Mpe_A0404 hypothetical protein YP_001789946.1 PFAM: MltA-interacting MipA family protein; KEGG: mpt:Mpe_A1330 putative outer membrane protein YP_001789947.1 PFAM: metallophosphoesterase; KEGG: mpt:Mpe_A3031 putative serine/threonine phosphatase YP_001789948.1 PFAM: UspA domain protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mpt:Mpe_A3032 putative serine/threonine kinase YP_001789949.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis YP_001789950.1 PFAM: protein of unknown function DUF1255; KEGG: eba:ebD86 hypothetical protein YP_001789951.1 KEGG: cvi:CV_2214 hypothetical protein YP_001789952.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: cvi:CV_2213 probable sensor histidine kinase/response regulator YP_001789953.1 KEGG: mpt:Mpe_A3554 hypothetical protein YP_001789954.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_001789955.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mpt:Mpe_A2512 LysE family efflux protein YP_001789956.1 PFAM: Class I peptide chain release factor; KEGG: ajs:Ajs_1612 class I peptide chain release factor YP_001789957.1 KEGG: ajs:Ajs_0176 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein YP_001789958.1 PFAM: major facilitator superfamily MFS_1; KEGG: mpt:Mpe_A3563 hypothetical protein YP_001789959.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mpt:Mpe_A3564 putative transmembrane protein YP_001789960.1 PFAM: response regulator receiver; KEGG: mpt:Mpe_A3686 response regulator YP_001789961.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate YP_001789962.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_0158 transcriptional regulator, LysR family YP_001789965.1 PFAM: Aldehyde Dehydrogenase_; KEGG: sil:SPO0097 aldehyde dehydrogenase family protein YP_001789966.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock YP_001789967.1 KEGG: ajs:Ajs_0789 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein YP_001789968.1 PFAM: Cytochrome b/b6 domain; KEGG: mpt:Mpe_A0850 cytochrome b YP_001789969.1 PFAM: cytochrome c1; KEGG: mpt:Mpe_A0851 cytochrome c1 precursor YP_001789970.1 PFAM: Glutathione S-transferase domain; KEGG: mpt:Mpe_A0852 putative transcription modulator protein YP_001789971.1 PFAM: Stringent starvation protein B; KEGG: mpt:Mpe_A0853 ClpXP protease specificity-enhancing factor YP_001789972.1 PFAM: Transaldolase; KEGG: ade:Adeh_4063 putative translaldolase YP_001789973.1 PFAM: protein of unknown function DUF454; KEGG: rfr:Rfer_2579 protein of unknown function DUF454 YP_001789974.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: mpt:Mpe_A1234 DNA-directed DNA polymerase YP_001789975.1 KEGG: rfr:Rfer_1228 hypothetical protein YP_001789976.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: mpt:Mpe_A3769 TldD protein YP_001789977.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive YP_001789978.1 KEGG: ajs:Ajs_3643 hypothetical protein YP_001789979.1 TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: mpt:Mpe_A3773 hypothetical protein YP_001789980.1 TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; KEGG: mpt:Mpe_A3702 SecA-related metal-binding protein YP_001789981.1 PFAM: UspA domain protein; KEGG: mpt:Mpe_A3700 hypothetical protein YP_001789983.1 KEGG: mpt:Mpe_A3516 phosphodiesterase/alkaline phosphatase D YP_001789984.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport YP_001789985.1 PFAM: FAD dependent oxidoreductase; KEGG: mpt:Mpe_A3520 D-amino-acid dehydrogenase YP_001789987.1 PFAM: Resolvase domain; KEGG: atc:AGR_L_1981 hypothetical protein YP_001789991.1 PFAM: integrase family protein; KEGG: pen:PSEEN1782 integrase YP_001789992.1 PFAM: transposase IS4 family protein; KEGG: eba:ebA3243 transposase, IS5 family YP_001789993.1 TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pol:Bpro_1798 phosphoglycolate phosphatase YP_001789994.1 Involved in ubiquinone biosynthesis YP_001789995.1 PFAM: OmpA/MotB domain protein; KEGG: mpt:Mpe_A2237 putative signal peptide protein YP_001789996.1 negatively supercoils closed circular double-stranded DNA YP_001789997.1 KEGG: rfr:Rfer_3193 hypothetical protein YP_001789998.1 TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: mpt:Mpe_A2241 P-protein (bifunctional includes: chorismate mutase and prephenate dehydratase) YP_001789999.1 PFAM: Prephenate dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mpt:Mpe_A2242 prephenate dehydrogenase YP_001790000.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; catalyzes CMP phosphorylation YP_001790001.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_001790002.1 TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: mpt:Mpe_A2245 putative integration host factor beta-subunit (IHF-beta) protein YP_001790003.1 KEGG: mpt:Mpe_A2246 hypothetical protein YP_001790004.1 KEGG: mpt:Mpe_A2247 hypothetical protein YP_001790005.1 TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: dar:Daro_3928 lipopolysaccharide heptosyltransferase I YP_001790006.1 KEGG: tbd:Tbd_0736 hypothetical protein YP_001790007.1 KEGG: mca:MCA1515 hypothetical protein YP_001790008.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: gur:Gura_3058 methyltransferase type 12 YP_001790009.1 KEGG: ret:RHE_CH02994 hypothetical protein YP_001790011.1 KEGG: gdi:GDI2996 hypothetical protein YP_001790012.1 PFAM: glycosyl transferase group 1; KEGG: fjo:Fjoh_2517 glycosyl transferase, group 1 YP_001790013.1 PFAM: glycosyl transferase family 9; KEGG: bpt:Bpet3111 ADP-heptose-LPS heptosyltransferase II YP_001790014.1 KEGG: mpt:Mpe_A2249 hypothetical protein YP_001790015.1 PFAM: Patatin; KEGG: mpt:Mpe_A2250 hypothetical protein YP_001790016.1 KEGG: mpt:Mpe_A2252 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_001790017.1 PFAM: Rhodanese domain protein; KEGG: aav:Aave_3026 rhodanese domain protein YP_001790018.1 TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_3803 transcriptional regulator YP_001790019.1 PFAM: GTPase EngC; KEGG: mpt:Mpe_A2914 putative ATP/GTP-binding protein YP_001790020.1 PFAM: peptidase M48 Ste24p; KEGG: mpt:Mpe_A2912 STE24 endopeptidase YP_001790021.1 3'-5' exoribonuclease specific for small oligoribonuclotides YP_001790022.1 PFAM: regulatory protein MarR; KEGG: rpe:RPE_3794 transcriptional regulator, MarR family YP_001790023.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: dac:Daci_2761 acyl-CoA dehydrogenase domain protein YP_001790024.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_0803 ABC transporter related YP_001790025.1 PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_0802 ABC transporter related YP_001790026.1 PFAM: inner-membrane translocator; KEGG: pna:Pnap_0801 inner-membrane translocator YP_001790027.1 PFAM: Extracellular ligand-binding receptor; KEGG: pna:Pnap_0800 extracellular ligand-binding receptor YP_001790028.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rfr:Rfer_0271 short-chain dehydrogenase/reductase SDR YP_001790029.1 catalyzes the conversion of ferulic acid to feruloyl-CoA YP_001790030.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001790031.1 PFAM: amidohydrolase 2; KEGG: rfr:Rfer_0275 amidohydrolase 2 YP_001790032.1 PFAM: cytochrome c class I; KEGG: pol:Bpro_0336 cytochrome c, class I YP_001790033.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: rfr:Rfer_0084 ferredoxin--NADP(+) reductase YP_001790034.1 PFAM: Chemotaxis phosphatase CheZ; KEGG: mpt:Mpe_A2875 chemotaxis protein CheZ YP_001790035.1 PFAM: response regulator receiver; KEGG: aav:Aave_4410 response regulator receiver protein YP_001790036.1 PFAM: OmpA/MotB domain protein; KEGG: mpt:Mpe_A2873 chemotaxis signal transduction protein CheY YP_001790037.1 KEGG: mpt:Mpe_A2872 chemotaxis signal transduction protein CheY YP_001790038.1 KEGG: ajs:Ajs_0032 methyltransferase type 12 YP_001790039.1 KEGG: mpt:Mpe_A2795 hypothetical protein YP_001790040.1 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems YP_001790041.1 PFAM: flagellar transcriptional activator; KEGG: mpt:Mpe_A2869 transcriptional regulator YP_001790042.1 PFAM: Tetratricopeptide TPR_4; KEGG: rca:Rcas_1625 TPR repeat-containing protein YP_001790043.1 KEGG: cph:Cpha266_1838 hypothetical protein YP_001790044.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: swi:Swit_2139 TPR repeat-containing protein YP_001790045.1 PFAM: flagellin domain protein; KEGG: ajs:Ajs_3813 flagellin domain protein YP_001790046.1 PFAM: flagellin domain protein; KEGG: ajs:Ajs_3813 flagellin domain protein YP_001790047.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: mpt:Mpe_A2865 flagellar capping protein YP_001790048.1 PFAM: flagellar protein FliS; KEGG: mpt:Mpe_A2864 flagellar protein YP_001790049.1 KEGG: mpt:Mpe_A2863 flagellar chaperone YP_001790050.1 PFAM: type IV pilus assembly PilZ; KEGG: mpt:Mpe_A2862 glycosyltransferase-like protein YP_001790051.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: mpt:Mpe_A0564 flagellar hook-basal body protein YP_001790052.1 TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: mpt:Mpe_A0565 flagellar biosynthesis lipoprotein YP_001790053.1 PFAM: flagellar motor switch protein FliG; KEGG: mpt:Mpe_A0566 flagellar motor switch protein YP_001790054.1 PFAM: flagellar assembly protein FliH; KEGG: mpt:Mpe_A0567 flagellar biosynthesis protein YP_001790055.1 KEGG: mpt:Mpe_A0568 flagellar biosynthesis ATPase; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase YP_001790056.1 TIGRFAM: flagellar export protein FliJ; KEGG: mpt:Mpe_A0569 flagellar biosynthesis chaperone YP_001790057.1 PFAM: flagellar hook-length control protein; KEGG: mpt:Mpe_A0570 flagellar hook-length control protein YP_001790058.1 PFAM: flagellar basal body-associated protein FliL; KEGG: mpt:Mpe_A0571 flagellar basal body-associated protein YP_001790059.1 PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: mpt:Mpe_A0572 flagellar motor switch protein YP_001790060.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: mpt:Mpe_A0573 flagellar motor switch protein YP_001790061.1 PFAM: flagellar biosynthesis protein FliO; KEGG: mpt:Mpe_A0574 flagellar biogenesis protein YP_001790062.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus YP_001790063.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: mpt:Mpe_A0576 flagellar biosynthesis protein YP_001790064.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: mpt:Mpe_A0577 flagellar biosynthesis protein YP_001790065.1 KEGG: mpt:Mpe_A0322 putative transmembrane protein YP_001790066.1 PFAM: PTS system fructose subfamily IIA component; KEGG: mpt:Mpe_A0323 PTS system, unknown pentitol phosphotransferase enzyme II component, putative YP_001790067.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: aav:Aave_0353 phosphotransferase system, phosphocarrier protein HPr YP_001790068.1 KEGG: mpt:Mpe_A0325 hypothetical protein YP_001790069.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: mpt:Mpe_A0326 putative phosphoenolpyruvate-protein phosphotransferase transmembrane YP_001790071.1 PFAM: transposase IS3/IS911 family protein; KEGG: aeh:Mlg_2336 hypothetical protein YP_001790073.1 PFAM: Integrase catalytic region; KEGG: bvi:Bcep1808_6227 integrase, catalytic region YP_001790074.1 PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; KEGG: pla:Plav_3437 IstB domain protein ATP-binding protein YP_001790075.1 KEGG: mpt:Mpe_A2256 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_001790076.1 TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: mpt:Mpe_A2257 putative ferredoxin (2Fe-2S) protein YP_001790077.1 involved in the maturation of iron-sulfur cluster-containing proteins YP_001790078.1 TIGRFAM: co-chaperone Hsc20; PFAM: heat shock protein DnaJ domain protein; HSC20 oligomerisation; KEGG: mpt:Mpe_A2259 chaperone protein YP_001790079.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly protein IscA; PFAM: HesB/YadR/YfhF-family protein; KEGG: ajs:Ajs_2142 iron-sulfur cluster assembly protein IscA YP_001790080.1 TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: mpt:Mpe_A2261 (Fe-S) cluster formation/repair protein YP_001790081.1 TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mpt:Mpe_A2262 cysteine desulfurase YP_001790082.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mpt:Mpe_A2263 hypothetical protein YP_001790083.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mpt:Mpe_A2264 low molecular weight tyrosine-phosphatase YP_001790084.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_001790085.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate YP_001790086.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mpt:Mpe_A0901 alcohol dehydrogenase YP_001790088.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: rfr:Rfer_2728 serine/threonine protein kinase YP_001790089.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors YP_001790090.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway YP_001790091.1 KEGG: mmw:Mmwyl1_2332 hypothetical protein YP_001790092.1 KEGG: abo:ABO_2005 hypothetical protein YP_001790093.1 KEGG: mpt:Mpe_A1145 hypothetical protein YP_001790094.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine YP_001790095.1 KEGG: pna:Pnap_1477 hypothetical protein YP_001790096.1 KEGG: mpt:Mpe_A1148 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2 YP_001790097.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rfr:Rfer_2544 diguanylate cyclase YP_001790098.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: pna:Pnap_2042 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001790099.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mes:Meso_4517 oxidoreductase-like YP_001790100.1 PFAM: Methyltransferase type 11; KEGG: sit:TM1040_3839 methyltransferase type 11 YP_001790101.1 KEGG: mfa:Mfla_1132 protein of unknown function DUF1555 YP_001790102.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: azo:azo3212 ParA family protein YP_001790103.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: pna:Pnap_1281 major facilitator superfamily MFS_1 YP_001790104.1 PFAM: Urease accessory protein UreF; KEGG: mpt:Mpe_A0664 urease accessory protein YP_001790105.1 involved in the assembly of the urease metallocenter; possible nickel donor YP_001790106.1 PFAM: protein of unknown function DUF477; KEGG: aav:Aave_0379 protein of unknown function DUF477 YP_001790107.1 PFAM: protein of unknown function DUF477; KEGG: pna:Pnap_0258 protein of unknown function DUF477 YP_001790108.1 PFAM: LemA family protein; KEGG: mpt:Mpe_A0145 LemA protein YP_001790109.1 SMART: Rhodanese domain protein YP_001790110.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_001790111.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active YP_001790113.1 KEGG: pol:Bpro_1352 urease subunit gamma; TIGRFAM: urease, gamma subunit; PFAM: Urease gamma subunit region YP_001790114.1 KEGG: rso:RS02334 probable signal peptide protein YP_001790115.1 KEGG: tdn:Tmden_1952 hypothetical protein YP_001790116.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A0670 sensor histidine kinase/response regulator YP_001790117.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: aav:Aave_3524 two component transcriptional regulator, LuxR family YP_001790118.1 TIGRFAM: urea ABC transporter, urea binding protein; KEGG: mpt:Mpe_A0697 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein YP_001790119.1 TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: pol:Bpro_1394 inner-membrane translocator YP_001790120.1 TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: mpt:Mpe_A0699 putative permease transporter transmembrane protein YP_001790121.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: mpt:Mpe_A0700 branched-chain amino acid ABC transporter, ATP-binding protein, putative YP_001790122.1 KEGG: mpt:Mpe_A0701 branched-chain amino acid ABC transporter, ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase YP_001790123.1 PFAM: HI0933 family protein; KEGG: mpt:Mpe_A1785 hypothetical protein YP_001790124.1 KEGG: mfa:Mfla_0451 alkaline phosphatase YP_001790125.1 PFAM: protein of unknown function DUF1555; KEGG: mfa:Mfla_1122 hypothetical protein YP_001790126.1 PFAM: Urease accessory protein UreD; KEGG: aav:Aave_1082 urease accessory protein UreD YP_001790127.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: azo:azo2121 cold shock-like protein YP_001790128.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mpt:Mpe_A0774 hypothetical protein YP_001790129.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_1140 binding-protein-dependent transport systems inner membrane component YP_001790130.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dac:Daci_1139 ABC transporter related YP_001790131.1 PFAM: NMT1/THI5 like domain protein; KEGG: aav:Aave_1093 twin-arginine translocation pathway signal YP_001790132.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mpt:Mpe_A0775 hypothetical protein YP_001790133.1 putative bifunctional enzyme; OHCU decarboxylase catalyzes 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline to allantoin and allantoate amidohydrolase converts allantoate to (S)-ureidoglycolate and ammonia YP_001790134.1 KEGG: pna:Pnap_0355 polysaccharide deacetylase; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase YP_001790135.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mpt:Mpe_A0778 putative transcription regulator protein YP_001790136.1 TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: mpt:Mpe_A0779 putative purine catabolism-related protein YP_001790137.1 PFAM: protein of unknown function DUF989; KEGG: pna:Pnap_0357 protein of unknown function DUF989 YP_001790138.1 TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; KEGG: ajs:Ajs_3401 Na/Pi-cotransporter II-related protein YP_001790139.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mms:mma_0510 methyl-accepting chemotaxis protein YP_001790140.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; KEGG: mpt:Mpe_A0214 signal transduction protein YP_001790141.1 PFAM: helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; Ada metal-binding domain protein; AlkA domain protein; KEGG: spe:Spro_3547 transcriptional regulator, AraC family YP_001790142.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: aav:Aave_2824 methylated-DNA--protein-cysteine methyltransferase YP_001790143.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc2507 probable transmembrane protein YP_001790144.1 KEGG: mdo:100019988 similar to ifapsoriasin YP_001790145.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: aav:Aave_2596 gluconolactonase YP_001790146.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ppf:Pput_1201 TRAP dicarboxylate transporter, DctM subunit YP_001790147.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: ppf:Pput_1202 tripartite ATP-independent periplasmic transporter, DctQ component YP_001790148.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pmy:Pmen_3301 TRAP dicarboxylate transporter, DctP subunit YP_001790149.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: vei:Veis_1238 NAD-dependent epimerase/dehydratase YP_001790150.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mpt:Mpe_A0971 regulatory protein, GntR YP_001790151.1 catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate YP_001790152.1 KEGG: pol:Bpro_3421 glucarate dehydratase; TIGRFAM: glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein YP_001790153.1 PFAM: Aldehyde Dehydrogenase_; KEGG: pol:Bpro_3422 aldehyde dehydrogenase YP_001790154.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A0972 hypothetical protein YP_001790155.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rme:Rmet_5274 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_001790156.1 PFAM: HpcH/HpaI aldolase; KEGG: mpt:Mpe_A0974 2-dehydro-3-deoxyglucarate aldolase YP_001790157.1 KEGG: pol:Bpro_3102 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding YP_001790158.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mpt:Mpe_A2969 type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB YP_001790159.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: mpt:Mpe_A2031 putative DNA mismatch repair protein YP_001790160.1 PFAM: Extracellular ligand-binding receptor; KEGG: dar:Daro_3540 extracellular ligand-binding receptor YP_001790161.1 PFAM: SNARE associated Golgi protein; KEGG: mpt:Mpe_A2029 DedA protein (DSG-1 protein) YP_001790162.1 KEGG: dac:Daci_1894 hypothetical protein YP_001790163.1 PFAM: cell wall hydrolase/autolysin; KEGG: mpt:Mpe_A2027 N-acetylmuramoyl-L-alanine amidase YP_001790164.1 PFAM: protein of unknown function UPF0079; KEGG: mpt:Mpe_A2026 hypothetical protein YP_001790165.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: mpt:Mpe_A2025 putative iron-sulfur 4Fe-4S ferredoxin protein YP_001790166.1 PFAM: MOFRL domain protein; KEGG: azo:azo1162 probable hydroxypyruvate reductase YP_001790167.1 KEGG: pol:Bpro_4563 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_001790168.1 KEGG: pol:Bpro_4562 hydroxypyruvate isomerase; TIGRFAM: hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel YP_001790169.1 catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate YP_001790170.1 KEGG: rfr:Rfer_0499 hypothetical protein YP_001790171.1 KEGG: rfr:Rfer_0498 hypothetical protein YP_001790172.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: rfr:Rfer_0497 oxidoreductase FAD/NAD(P)-binding YP_001790174.1 catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway. YP_001790175.1 TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: mpt:Mpe_A0781 putative permease transmembrane protein YP_001790176.1 PFAM: protein of unknown function DUF989; KEGG: pna:Pnap_0357 protein of unknown function DUF989 YP_001790177.1 PFAM: Auxin Efflux Carrier; KEGG: mpt:Mpe_A2024 hypothetical protein YP_001790178.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: gvi:gll1951 phosphopantetheinyltransferase family protein YP_001790179.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A2023 hypothetical protein YP_001790180.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: pol:Bpro_3191 tyrosine recombinase XerD YP_001790181.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A0132 amino acid ABC transporter YP_001790182.1 PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: pna:Pnap_3442 extracellular solute-binding protein, family 3 YP_001790183.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: aav:Aave_3092 membrane-bound metal-dependent hydrolase YP_001790184.1 KEGG: spu:758554 hypothetical protein LOC758554 YP_001790186.1 KEGG: spu:758554 hypothetical protein LOC758554 YP_001790187.1 TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: rfr:Rfer_3908 protein of unknown function DUF196 YP_001790188.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: eba:ebA3283 hypothetical protein YP_001790189.1 TIGRFAM: CRISPR-associated protein Cas4; PFAM: protein of unknown function DUF83; KEGG: eba:ebA3284 predicted RecB family exonuclease protein YP_001790190.1 TIGRFAM: addiction module component, TIGR02574 family; PFAM: Putative addiction module component CHP02574 family protein YP_001790191.1 PFAM: plasmid stabilization system; KEGG: noc:Noc_2071 plasmid stabilization system protein YP_001790192.1 TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein, Csd2 family; PFAM: CRISPR-associated protein TM1801; KEGG: mca:MCA0654 CRISPR-associated TM1801 family protein YP_001790193.1 TIGRFAM: CRISPR-associated protein, Csd1 family; PFAM: CRISPR-associated protein CT1133; KEGG: gme:Gmet_1066 CRISPR-associated CT1133 family protein YP_001790194.1 TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: mca:MCA0656 CRISPR-associated CT1134 family protein YP_001790195.1 PFAM: DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mca:MCA0657 CRISPR-associated helicase Cas3 YP_001790196.1 KEGG: mpt:Mpe_A3300 methyl-accepting chemotaxis protein YP_001790197.1 PFAM: Hsp33 protein; KEGG: pna:Pnap_1179 HSP33 protein YP_001790198.1 KEGG: pol:Bpro_3188 transferase hexapeptide repeat YP_001790199.1 PFAM: protein of unknown function DUF455; KEGG: aav:Aave_1317 protein of unknown function DUF455 YP_001790200.1 PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: pna:Pnap_1267 ion transport protein YP_001790201.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: mpt:Mpe_A2020 hypothetical protein YP_001790202.1 KEGG: aav:Aave_1320 hypothetical protein YP_001790203.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: fre:Franean1_6766 endonuclease/exonuclease/phosphatase YP_001790204.1 PFAM: FAD linked oxidase domain protein; biotin/lipoate A/B protein ligase; KEGG: mpt:Mpe_A3638 putative glycolate oxidase (FAD-linked subunit) oxidoreductase protein YP_001790205.1 PFAM: FAD linked oxidase domain protein; KEGG: mpt:Mpe_A3639 FAD linked oxidase YP_001790206.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mpt:Mpe_A3640 glycolate oxidase iron-sulfur subunit YP_001790207.1 PFAM: Septum formation initiator; KEGG: mpt:Mpe_A2848 hypothetical protein YP_001790208.1 PFAM: enolase; KEGG: ajs:Ajs_0997 phosphopyruvate hydratase YP_001790209.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis YP_001790210.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_001790211.1 KEGG: dac:Daci_1821 pantoate--beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase YP_001790212.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_001790213.1 KEGG: sal:Sala_1918 hypothetical protein YP_001790214.1 KEGG: mpt:Mpe_A2843 hypothetical protein YP_001790215.1 This protein performs the mismatch recognition step during the DNA repair process YP_001790217.1 KEGG: pol:Bpro_1182 membrane protein-like YP_001790218.1 PFAM: regulatory protein MarR; KEGG: pna:Pnap_2122 transcriptional regulator, MarR family YP_001790219.1 TIGRFAM: 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_2123 short-chain dehydrogenase/reductase SDR YP_001790220.1 TIGRFAM: 2-ketocyclohexanecarboxyl-CoA hydrolase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pna:Pnap_2124 naphthoate synthase YP_001790221.1 TIGRFAM: cyclohexanecarboxyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pna:Pnap_2125 acyl-CoA dehydrogenase domain protein YP_001790222.1 AliA; in Rhodopseudomonas palustris, this enzyme was found to act on 3-chlorobenzoate and allows the organism to grow on this substrate YP_001790223.1 PFAM: conserved hypothetical protein; KEGG: pna:Pnap_2127 uncharacterized protein UPF0065 YP_001790224.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pna:Pnap_2128 enoyl-CoA hydratase/isomerase YP_001790225.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pna:Pnap_2129 acyl-CoA dehydrogenase YP_001790226.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: mpt:Mpe_A1443 electron-transferring-flavoprotein dehydrogenase YP_001790227.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pna:Pnap_2130 acyl-CoA dehydrogenase domain protein YP_001790228.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dac:Daci_2390 electron transfer flavoprotein alpha/beta-subunit YP_001790229.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: mpt:Mpe_A1297 electron transfer flavoprotein alpha-subunit YP_001790230.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pna:Pnap_2941 enoyl-CoA hydratase/isomerase YP_001790231.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: pna:Pnap_2940 3-hydroxybutyryl-CoA dehydrogenase YP_001790232.1 KEGG: pol:Bpro_1231 beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase YP_001790233.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pna:Pnap_2708 transcriptional regulator, AraC family YP_001790234.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_2709 short-chain dehydrogenase/reductase SDR YP_001790235.1 proposed role in polysaccahride synthesis YP_001790236.1 PFAM: NIPSNAP family containing protein; KEGG: pna:Pnap_2711 NIPSNAP family containing protein YP_001790237.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_2712 short-chain dehydrogenase/reductase SDR YP_001790238.1 PFAM: inner-membrane translocator; KEGG: pna:Pnap_2713 inner-membrane translocator YP_001790239.1 PFAM: inner-membrane translocator; KEGG: pna:Pnap_2714 inner-membrane translocator YP_001790240.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_2715 ABC transporter related YP_001790241.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_2716 ABC transporter related YP_001790242.1 PFAM: Extracellular ligand-binding receptor; KEGG: pna:Pnap_2717 extracellular ligand-binding receptor YP_001790243.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: mpt:Mpe_A1354 predicted rhodopsin-like G-protein coupled receptor superfamily YP_001790244.1 KEGG: pna:Pnap_3659 hypothetical protein YP_001790245.1 PFAM: cytochrome B561; KEGG: pna:Pnap_3658 cytochrome b561 YP_001790246.1 PFAM: coenzyme A transferase; KEGG: pna:Pnap_2700 coenzyme A transferase YP_001790247.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pna:Pnap_2701 acyl-CoA dehydrogenase domain protein YP_001790248.1 PFAM: Extracellular ligand-binding receptor; KEGG: pna:Pnap_1650 extracellular ligand-binding receptor YP_001790249.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bja:blr3664 putative oxidoreductase YP_001790250.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: xau:Xaut_2699 xylose isomerase domain protein TIM barrel YP_001790251.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_2720 short-chain dehydrogenase/reductase SDR YP_001790252.1 PFAM: inositol monophosphatase; KEGG: mpt:Mpe_A2841 inositol-1(or 4)-monophosphatase YP_001790253.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mpt:Mpe_A2840 putative tRNA/rRNA methyltransferase protein YP_001790254.1 TIGRFAM: serine O-acetyltransferase; KEGG: mpt:Mpe_A2839 serine O-acetyltransferase YP_001790255.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: mpt:Mpe_A2838 molybdopterin biosynthesis Mog protein YP_001790256.1 PFAM: protein of unknown function DUF615; KEGG: mpt:Mpe_A2837 hypothetical protein YP_001790257.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: mpt:Mpe_A2836 PmbA protein YP_001790258.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pol:Bpro_1749 twin-arginine translocation pathway signal YP_001790259.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: vei:Veis_2234 protein of unknown function DUF6, transmembrane YP_001790260.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpt:Mpe_A3053 oxidoreductase YP_001790261.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mpt:Mpe_A3051 permeases of the drug/metabolite transporter (DMT) superfamily YP_001790262.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mpt:Mpe_A3049 quinone oxidoreductase, putative YP_001790263.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RS01896 probable TonB-dependent receptor signal peptide protein YP_001790264.1 KEGG: rso:RS01895 putative transmembrane protein YP_001790265.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rso:RS01894 hypothetical protein YP_001790266.1 KEGG: mpt:Mpe_A3050 hypothetical protein YP_001790267.1 KEGG: mpt:Mpe_A3048 integral membrane protein YP_001790268.1 TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: mpt:Mpe_A3047 signal peptidase II YP_001790269.1 PFAM: aldo/keto reductase; KEGG: dsh:Dshi_2756 aldo/keto reductase YP_001790270.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: mpt:Mpe_A3046 isoleucyl-tRNA synthetase YP_001790271.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities YP_001790272.1 KEGG: rfr:Rfer_2550 putative fructose transport system kinase YP_001790273.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: aav:Aave_3440 acyl-CoA dehydrogenase domain protein YP_001790274.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ajs:Ajs_3393 acyl-CoA dehydrogenase domain protein YP_001790275.1 KEGG: mpt:Mpe_A3040 predicted peptidase aspartic family YP_001790276.1 PFAM: protein of unknown function DUF520; KEGG: mpt:Mpe_A3039 hypothetical protein YP_001790277.1 KEGG: mpt:Mpe_A3038 UDP-N-acetylmuramate dehydrogenase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein YP_001790278.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: mpt:Mpe_A3528 putative lipoprotein YP_001790279.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mpt:Mpe_A3689 GTN reductase YP_001790280.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mpt:Mpe_A2071 endonuclease/exonuclease/phosphatase family protein YP_001790281.1 KEGG: pna:Pnap_1322 hypothetical protein YP_001790282.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: syd:Syncc9605_0708 deoxyribodipyrimidine photolyase YP_001790283.1 KEGG: syr:SynRCC307_2288 DNA photolyase FAD binding domain YP_001790284.1 PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: mpt:Mpe_A2055 putative alpha-deoxyribodipyrimidine photolyase-related protein YP_001790285.1 KEGG: mpt:Mpe_A2054 hypothetical protein YP_001790286.1 PFAM: thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pnu:Pnuc_0780 methyltransferase type 11 YP_001790287.1 PFAM: Rhodanese domain protein; KEGG: mpt:Mpe_A3482 rhodanese-related sulfurtransferase-like protein YP_001790288.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: aeh:Mlg_0631 cyclic nucleotide-binding protein YP_001790289.1 KEGG: hch:HCH_00812 deoxyinosine 3'endonuclease (endonuclease V) YP_001790290.1 PFAM: protein of unknown function DUF98 YP_001790291.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: pna:Pnap_2839 cation diffusion facilitator family transporter YP_001790292.1 KEGG: rfr:Rfer_0528 porin, gram-negative type YP_001790293.1 PFAM: dihydrofolate reductase region; KEGG: mpt:Mpe_A2052 dihydrofolate reductase YP_001790294.1 PFAM: thymidylate synthase; KEGG: ajs:Ajs_1197 thymidylate synthase YP_001790295.1 PFAM: type IV pilus assembly PilZ YP_001790296.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_3238 ABC transporter related YP_001790297.1 KEGG: mpt:Mpe_A1631 hypothetical protein YP_001790298.1 KEGG: mpt:Mpe_A1632 multi-Cu oxidase YP_001790299.1 PFAM: outer membrane efflux protein; KEGG: mpt:Mpe_A1633 putative copper resistance-related lipoprotein YP_001790300.1 PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: pol:Bpro_3485 twin-arginine translocation pathway signal YP_001790301.1 PFAM: blue (type 1) copper domain protein; KEGG: eba:ebA1878 predicted multicopper oxidase YP_001790302.1 PFAM: protein of unknown function DUF411; KEGG: mpt:Mpe_A0494 hypothetical protein YP_001790303.1 KEGG: pst:PSPTO_5177 hypothetical protein YP_001790304.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: psb:Psyr_0362 RNA polymerase sigma factor YP_001790305.1 KEGG: dac:Daci_3806 hypothetical protein YP_001790306.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bxe:Bxe_A1639 ABC peptide transporter, ATPase subunit YP_001790307.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rme:Rmet_2144 binding-protein-dependent transport systems inner membrane component YP_001790308.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_2974 binding-protein-dependent transport systems inner membrane component YP_001790309.1 PFAM: protein of unknown function DUF86; KEGG: pna:Pnap_0134 protein of unknown function DUF86 YP_001790310.1 PFAM: DNA polymerase beta domain protein region; KEGG: ppd:Ppro_2946 DNA polymerase, beta domain protein region YP_001790311.1 PFAM: extracellular solute-binding protein family 5; KEGG: bam:Bamb_2094 extracellular solute-binding protein, family 5 YP_001790312.1 KEGG: ypi:YpsIP31758_0091 hypothetical protein YP_001790313.1 KEGG: mpt:Mpe_A2048 hypothetical protein YP_001790315.1 KEGG: mpt:Mpe_A0864 hypothetical protein YP_001790316.1 PFAM: protein of unknown function DUF214; KEGG: mpt:Mpe_A2047 ABC transporter, permease protein YP_001790317.1 PFAM: beta-lactamase domain protein; KEGG: ajs:Ajs_0715 beta-lactamase domain protein YP_001790318.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A2035 ABC transporter, ATP-binding protein YP_001790319.1 KEGG: ajs:Ajs_3111 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_001790320.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_3211 drug resistance transporter Bcr/CflA subfamily YP_001790321.1 KEGG: eba:ebB34 hypothetical protein YP_001790322.1 KEGG: eba:ebA1117 hypothetical protein YP_001790323.1 PFAM: Domain of unknown function DUF1841; KEGG: pol:Bpro_1226 hypothetical protein YP_001790324.1 PFAM: nitroreductase; KEGG: xac:XAC0554 hypothetical protein YP_001790325.1 PFAM: protein of unknown function DUF81; KEGG: mpt:Mpe_A1099 putative integral membrane protein YP_001790326.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bpt:Bpet3275 conserved hypothetical protein, putative enoyl-CoA hydratase family member YP_001790327.1 catalyzes the formation of malonyl-CoA from malonate and CoA YP_001790328.1 KEGG: bpt:Bpet0639 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001790329.1 KEGG: sse:Ssed_3337 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001790330.1 transport system that facilitates potassium-efflux YP_001790331.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: pol:Bpro_1238 NAD(P)H dehydrogenase (quinone) YP_001790332.1 KEGG: mpt:Mpe_A1153 putative partition-related protein YP_001790333.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpt:Mpe_A1151 two-component response regulator YP_001790334.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A1150 signal transduction histidine kinase-like protein YP_001790335.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids YP_001790336.1 KEGG: ajs:Ajs_0183 hypothetical protein YP_001790337.1 TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; KEGG: mpt:Mpe_A3546 putative formyltetrahydrofolate deformylase protein YP_001790338.1 KEGG: mpt:Mpe_A3545 hypothetical protein YP_001790339.1 KEGG: mpt:Mpe_A3544 hypothetical protein YP_001790340.1 KEGG: mpt:Mpe_A3543 hypothetical protein YP_001790341.1 PFAM: cytochrome c class I; KEGG: mpt:Mpe_A3542 putative cytochrome YP_001790342.1 PFAM: Fibronectin type III domain protein YP_001790343.1 PFAM: helicase domain protein; type III restriction protein res subunit; protein of unknown function DUF450; EcoEI R domain protein; SMART: DEAD-like helicases; KEGG: ajs:Ajs_2618 EcoEI R, C-terminal domain protein YP_001790344.1 PFAM: N-6 DNA methylase; KEGG: ajs:Ajs_2616 N-6 DNA methylase YP_001790345.1 PFAM: restriction modification system DNA specificity domain; KEGG: vei:Veis_1015 restriction modification system DNA specificity domain YP_001790347.1 KEGG: vvy:VV1909 hypothetical protein YP_001790348.1 KEGG: vei:Veis_3011 hypothetical protein YP_001790349.1 PFAM: conserved hypothetical protein; KEGG: azo:azo1638 hypothetical protein YP_001790350.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azo:azo1636 HTH-type transcriptional regulator YP_001790351.1 PFAM: O-methyltransferase family 2; Methyltransferase type 12; KEGG: mgi:Mflv_3940 O-methyltransferase, family 2 YP_001790352.1 KEGG: tbd:Tbd_0094 hypothetical protein YP_001790354.1 PFAM: cytochrome c class I; KEGG: mpt:Mpe_A0755 putative alcohol dehydrogenase cytochrome c subunit precursor YP_001790355.1 KEGG: pna:Pnap_1283 putative cytochrome c YP_001790356.1 PFAM: permease; KEGG: eba:ebA6443 predicted permease YP_001790357.1 TIGRFAM: redox-active disulfide protein 2; KEGG: eba:ebA6442 hypothetical protein YP_001790358.1 PFAM: LrgA family protein; KEGG: pol:Bpro_0432 LrgA YP_001790359.1 PFAM: LrgB family protein; KEGG: pol:Bpro_0431 LrgB-like protein YP_001790360.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; KEGG: bpt:Bpet2096 flagellar-specific RNA polymerase sigma factor YP_001790362.1 KEGG: gme:Gmet_1448 hypothetical protein YP_001790363.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Ig domain protein group 2 domain protein; Ig domain protein group 1 domain protein; KEGG: ttj:TTHA1868 extracellular serine protease YP_001790364.1 PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pol:Bpro_2122 TRAP C4-dicarboxylate transport system permease DctM subunit YP_001790365.1 KEGG: psa:PST_1663 hypothetical protein YP_001790366.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: azo:azo3677 putative C4-dicarboxylate-binding periplasmic protein YP_001790367.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pna:Pnap_2724 ferredoxin YP_001790368.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bvi:Bcep1808_3498 vanillate monooxygenase YP_001790369.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: csa:Csal_0345 transcriptional regulator, GntR family YP_001790370.1 PFAM: cytochrome c class I; KEGG: rfr:Rfer_4077 cytochrome c, class I YP_001790371.1 PFAM: NapC/NirT cytochrome c domain protein; KEGG: bpt:Bpet4055 cytochrome c-type protein YP_001790372.1 PFAM: NapC/NirT cytochrome c domain protein; KEGG: azo:azo3938 probable cytochrome c-type protein NapC YP_001790373.1 PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: azo:azo3939 probable diheme cytochrome c YP_001790374.1 TIGRFAM: ferredoxin-type protein, NapH/MauN family; KEGG: dsh:Dshi_3163 ferredoxin-type protein, NapH/MauN family YP_001790375.1 TIGRFAM: MauM/NapG family ferredoxin-type protein; KEGG: rsq:Rsph17025_3221 hypothetical protein YP_001790376.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC YP_001790378.1 KEGG: pna:Pnap_2325 nitrogenase MoFe cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1 YP_001790379.1 KEGG: tbd:Tbd_1456 putative diguanylate cyclase/phosphodiesterase (GGDEF and EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001790380.1 TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: dar:Daro_2890 peptidase M52, hydrogen uptake protein YP_001790381.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: dar:Daro_2889 nickel-dependent hydrogenase, large subunit YP_001790382.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: dar:Daro_2888 NADH ubiquinone oxidoreductase, 20 kDa subunit YP_001790383.1 KEGG: pna:Pnap_2324 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1 YP_001790384.1 TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: bbt:BBta_5920 nitrogenase molybdenum-iron protein NifX YP_001790385.1 TIGRFAM: nitrogen fixation protein; PFAM: protein of unknown function DUF269; KEGG: bxe:Bxe_B1473 hypothetical protein YP_001790386.1 PFAM: protein of unknown function DUF683; KEGG: pna:Pnap_2321 protein of unknown function DUF683 YP_001790387.1 TIGRFAM: ferredoxin III, nif-specific; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bvi:Bcep1808_6025 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001790388.1 PFAM: NifQ family protein; KEGG: bxe:Bxe_B1476 putative nitrogen fixation-related protein(NifQ) YP_001790389.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_2888 molybdenum ABC transporter, periplasmic molybdate-binding protein YP_001790390.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB0824 molybdenum transport system permease protein YP_001790391.1 KEGG: eba:ebA2719 molybdenum import ATP-binding protein; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase YP_001790392.1 KEGG: mpt:Mpe_A2174 hypothetical protein YP_001790393.1 TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mpt:Mpe_A2262 cysteine desulfurase YP_001790394.1 TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: mpt:Mpe_A2261 (Fe-S) cluster formation/repair protein YP_001790395.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: cvi:CV_3694 hypothetical protein YP_001790396.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: bvi:Bcep1808_5990 iron-sulfur cluster assembly accessory protein YP_001790397.1 KEGG: mfa:Mfla_0804 Fe-S protein assembly chaperone HscA; TIGRFAM: Fe-S protein assembly chaperone HscA; PFAM: Heat shock protein 70 YP_001790398.1 TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: pna:Pnap_1564 ferredoxin, 2Fe-2S type, ISC system YP_001790399.1 TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase; KEGG: pna:Pnap_2310 homocitrate synthase YP_001790400.1 PFAM: nitrogen fixation protein NifW; KEGG: pna:Pnap_2312 nitrogen fixation protein NifW YP_001790401.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bxe:Bxe_B1436 electron transfer flavoprotein, fix A (beta subunit) YP_001790402.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: bxe:Bxe_B1435 electron transfer flavoprotein FixB (alpha subunit) YP_001790403.1 PFAM: monooxygenase FAD-binding; HI0933 family protein; FAD dependent oxidoreductase; KEGG: pna:Pnap_2315 electron-transferring-flavoprotein dehydrogenase YP_001790404.1 KEGG: bvi:Bcep1808_5981 putative ferredoxin like protein; FixX YP_001790405.1 KEGG: pna:Pnap_1570 transcriptional regulator, NifA, fis family; TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001790406.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: eba:ebA3019 phosphate regulon transcriptional regulatory protein PhoB YP_001790407.1 PFAM: regulatory protein LuxR; KEGG: nmu:Nmul_A2579 transcriptional regulator, LuxR family YP_001790408.1 KEGG: nmc:NMC0423 probable insertion element IS1016 transposase YP_001790409.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: mms:mma_0633 exopolysaccharide biosynthesis protein YP_001790410.1 TIGRFAM: capsular exopolysaccharide family; KEGG: mms:mma_0634 mrp-like protein YP_001790411.1 PFAM: Fibronectin type III domain protein; KEGG: ret:RHE_CH01068 hypothetical protein YP_001790413.1 KEGG: mst:Msp_0062 hypothetical protein YP_001790414.1 PFAM: glycosyl transferase family 2; KEGG: dde:Dde_0844 glycosyltransferase involved in cell wall biogenesis-like YP_001790415.1 PFAM: glycosyl transferase family 8; KEGG: lsa:LSA1474 putative bifunctional glycosyl transferase, family 8 YP_001790416.1 PFAM: glycosyl transferase family 2; KEGG: smd:Smed_4802 glycosyl transferase family 2 YP_001790417.1 KEGG: nar:Saro_3228 hypothetical protein YP_001790418.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: ade:Adeh_4176 UDP-N-acetylglucosamine 2-epimerase YP_001790419.1 KEGG: aeh:Mlg_0113 hypothetical protein YP_001790420.1 PFAM: Methyltransferase type 11; KEGG: rpd:RPD_3889 methyltransferase type 11 YP_001790421.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4265 glycosyl transferase, family 2 YP_001790422.1 KEGG: hau:Haur_3584 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase YP_001790423.1 PFAM: glycosyl transferase family 2; KEGG: sfu:Sfum_0967 glycosyl transferase, family 2 YP_001790424.1 KEGG: pgi:PG0114 hypothetical protein YP_001790425.1 PFAM: polysaccharide biosynthesis protein; protein of unknown function DUF354; KEGG: smd:Smed_4810 polysaccharide biosynthesis protein YP_001790426.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ret:RHE_CH01368 probable aminotransferase protein (involved in cell wall biogenesis) YP_001790427.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: art:Arth_4059 NAD-dependent epimerase/dehydratase YP_001790428.1 PFAM: sugar transferase; KEGG: sfu:Sfum_0975 undecaprenyl-phosphate galactose phosphotransferase YP_001790429.1 KEGG: mag:amb0106 acetyltransferase YP_001790430.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: nha:Nham_3041 oxidoreductase-like YP_001790431.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cau:Caur_1631 glutamine--scyllo-inositol transaminase YP_001790432.1 KEGG: amr:AM1_5765 hypothetical protein YP_001790433.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: sat:SYN_01953 response regulator with a HTH DNA-binding domain YP_001790434.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: dar:Daro_1573 response regulator receiver:ATP-binding region, ATPase-like:histidine kinase, dimerization and phosphoacceptor region YP_001790435.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rso:RSc0292 response regulator transcription regulator protein YP_001790436.1 KEGG: rme:Rmet_5178 hypothetical protein YP_001790437.1 TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; KEGG: bvi:Bcep1808_5994 nitrogenase cofactor biosynthesis protein NifB YP_001790438.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bvi:Bcep1808_5995 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001790439.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: bxe:Bxe_B1447 HesB/YadR/YfhF YP_001790440.1 KEGG: pna:Pnap_1577 hypothetical protein YP_001790441.1 PFAM: leucine rich repeat variant; LRV FeS4 cluster domain protein; KEGG: bxe:Bxe_B1449 hypothetical protein YP_001790442.1 PFAM: NifZ family protein; KEGG: bxe:Bxe_B1450 hypothetical protein YP_001790443.1 KEGG: mca:MCA0210 NifZ protein, putative YP_001790444.1 KEGG: bxe:Bxe_B1452 hypothetical protein YP_001790445.1 PFAM: aminotransferase class V; KEGG: bvi:Bcep1808_6002 aminotransferase, class V YP_001790446.1 TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU family protein; KEGG: mca:MCA0213 hypothetical protein YP_001790447.1 KEGG: pna:Pnap_1584 hypothetical protein YP_001790448.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bvi:Bcep1808_6005 DegT/DnrJ/EryC1/StrS aminotransferase YP_001790449.1 KEGG: pna:Pnap_1586 hypothetical protein YP_001790450.1 PFAM: ferredoxin; KEGG: bbt:BBta_5894 putative ferredoxin, 2Fe-2S YP_001790451.1 PFAM: amine oxidase; KEGG: azc:AZC_3405 flavin-containing protein YP_001790453.1 KEGG: pna:Pnap_1062 hypothetical protein YP_001790454.1 PFAM: Phosphoglycerate mutase; KEGG: mpt:Mpe_A3811 hypothetical protein YP_001790455.1 KEGG: rfr:Rfer_1416 hypothetical protein YP_001790456.1 PFAM: Immunoglobulin I-set domain protein; SMART: Immunoglobulin subtype; KEGG: dsy:DSY0542 hypothetical protein YP_001790457.1 PFAM: protein of unknown function DUF255; KEGG: pna:Pnap_2043 protein of unknown function DUF255 YP_001790458.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_1745 diguanylate cyclase (GGDEF domain) YP_001790459.1 KEGG: bra:BRADO1846 hypothetical protein YP_001790460.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: pna:Pnap_2352 putative regulatory protein, FmdB family YP_001790461.1 KEGG: bvi:Bcep1808_6012 hypothetical protein YP_001790463.1 nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis YP_001790464.1 KEGG: bxe:Bxe_B1466 nitrogenase, molybdenum-iron protein alpha chain(NifD); TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1 YP_001790465.1 KEGG: bvi:Bcep1808_6017 nitrogenase molybdenum-iron protein beta chain; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1 YP_001790466.1 KEGG: pna:Pnap_2341 hypothetical protein YP_001790467.1 KEGG: pna:Pnap_2339 hypothetical protein YP_001790468.1 TIGRFAM: co-chaperone Hsc20; PFAM: heat shock protein DnaJ domain protein; HSC20 oligomerisation; KEGG: mpt:Mpe_A2259 chaperone protein YP_001790469.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: dac:Daci_4439 transcriptional regulator, IclR family YP_001790470.1 PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: pol:Bpro_1847 shikimate 5-dehydrogenase YP_001790471.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pol:Bpro_4499 TRAP dicarboxylate transporter, DctP subunit YP_001790472.1 PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; KEGG: pna:Pnap_0622 NmrA family protein YP_001790473.1 PFAM: helix-turn-helix HxlR type; KEGG: pna:Pnap_0621 transcriptional regulator, HxlR family YP_001790474.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ajs:Ajs_1913 uroporphyrin-III C-methyltransferase YP_001790475.1 PFAM: cytochrome d1 heme region; KEGG: ajs:Ajs_1912 nitrite reductase (NO-forming) YP_001790476.1 KEGG: ajs:Ajs_1911 hypothetical protein YP_001790477.1 PFAM: cytochrome d1 heme region; KEGG: ajs:Ajs_1910 cytochrome d1, heme region YP_001790478.1 KEGG: ajs:Ajs_1909 putative transcriptional regulator, AsnC family YP_001790479.1 KEGG: ajs:Ajs_1908 putative transcriptional regulator, AsnC family YP_001790480.1 KEGG: ajs:Ajs_1907 putative transcriptional regulator, AsnC family YP_001790481.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ajs:Ajs_1906 radical SAM domain protein YP_001790482.1 KEGG: dar:Daro_2934 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001790483.1 PFAM: cytochrome d1 heme region; KEGG: ajs:Ajs_1905 cytochrome d1, heme region YP_001790484.1 KEGG: gvi:glr2981 hypothetical protein YP_001790485.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pol:Bpro_1962 hypothetical protein YP_001790487.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: ajs:Ajs_1904 putative transcriptional regulator, Crp/Fnr family YP_001790488.1 PFAM: protein of unknown function DUF799; KEGG: psp:PSPPH_1127 lipoprotein, putative YP_001790489.1 KEGG: reh:H16_B0250 lipoprotein YP_001790490.1 PFAM: Curli production assembly/transport component CsgG; KEGG: pap:PSPA7_0048 lipoprotein, putative YP_001790491.1 TIGRFAM: hydrogenase maturation protease; KEGG: bxe:Bxe_C0532 hypothetical protein YP_001790492.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: bxe:Bxe_C0531 putative nickel-dependent hydrogenase, large subunit YP_001790493.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: rfr:Rfer_3856 NADH ubiquinone oxidoreductase, 20 kDa subunit YP_001790494.1 PFAM: ferredoxin; KEGG: rfr:Rfer_3857 hydrogen dehydrogenase YP_001790495.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: rfr:Rfer_3858 respiratory-chain NADH dehydrogenase domain, 51 kDa subunit YP_001790496.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: aha:AHA_2190 response regulator receiver:metal-dependent phosphohydrolase, HD subdomain YP_001790497.1 KEGG: aha:AHA_2188 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein YP_001790498.1 PFAM: von Willebrand factor type A; small acid-soluble spore P family protein; KEGG: dar:Daro_3197 von Willebrand factor, type A YP_001790499.1 KEGG: tbd:Tbd_0556 iron-sulfur cluster-binding protein YP_001790500.1 PFAM: ATPase associated with various cellular activities AAA_5; CbbQ/NirQ/NorQ domain protein; KEGG: tbd:Tbd_0558 putative nitric oxide reductase activation protein NorQ YP_001790501.1 PFAM: cytochrome c oxidase subunit I; KEGG: azo:azo3089 putative nitric-oxide reductase subunit B YP_001790502.1 KEGG: azo:azo3088 putative nitric-oxide reductase subunit C YP_001790503.1 PFAM: peptidase U32; KEGG: ajs:Ajs_3220 peptidase U32 YP_001790504.1 PFAM: peptidase U32; KEGG: ajs:Ajs_3221 peptidase U32 YP_001790505.1 PFAM: Sterol-binding domain protein; KEGG: azo:azo0372 hypothetical protein YP_001790506.1 PFAM: CBS domain containing protein; HPP family protein?; KEGG: mpt:Mpe_A0317 CBS domain protein YP_001790507.1 KEGG: rme:Rmet_4922 hypothetical protein YP_001790508.1 PFAM: NnrS family protein; KEGG: pna:Pnap_3970 NnrS family protein YP_001790509.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rfr:Rfer_1866 transcriptional regulator, BadM/Rrf2 family YP_001790510.1 TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: pna:Pnap_2096 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001790511.1 PFAM: NosL family protein; KEGG: ajs:Ajs_1134 NosL family protein YP_001790512.1 PFAM: ABC-2 type transporter; KEGG: ajs:Ajs_1135 ABC-2 type transporter YP_001790513.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_1136 ABC transporter related YP_001790514.1 PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: ajs:Ajs_1137 periplasmic copper-binding YP_001790515.1 PFAM: FMN-binding domain protein; KEGG: ajs:Ajs_1138 FMN-binding domain protein YP_001790516.1 reduces nitrous oxide to nitrogen YP_001790517.1 PFAM: ApbE family lipoprotein; KEGG: rso:RSp1366 probable thiamine biosynthesis ApbE transmembrane protein YP_001790518.1 KEGG: mpt:Mpe_A1702 putative NnrS family YP_001790519.1 PFAM: protein of unknown function DUF59; KEGG: mpt:Mpe_A1701 hypothetical protein YP_001790520.1 KEGG: pol:Bpro_4726 hypothetical protein YP_001790521.1 PFAM: cytochrome c class I; KEGG: pol:Bpro_2050 cytochrome c, class I YP_001790522.1 KEGG: pol:Bpro_2051 hypothetical protein YP_001790523.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_001790524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A1388 putative isoleucine biosynthesis transcriptional activator YP_001790525.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: mpt:Mpe_A1389 putative prolipoprotein diacylglyceryl transferase transmembrane YP_001790526.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_001790527.1 KEGG: pol:Bpro_3263 putative transporter signal peptide protein YP_001790528.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate YP_001790529.1 PFAM: ribosomal protein S15; KEGG: mpt:Mpe_A1398 30S ribosomal protein S15 YP_001790530.1 KEGG: mpt:Mpe_A1399 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein YP_001790531.1 TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ajs:Ajs_0954 alcohol dehydrogenase, zinc-binding domain protein YP_001790532.1 PFAM: triosephosphate isomerase; KEGG: mpt:Mpe_A1401 triphosphate isomerase YP_001790533.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: mpt:Mpe_A1402 general secretory pathway, export membrane protein YP_001790534.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: mpt:Mpe_A1403 NADH dehydrogenase I chain A YP_001790535.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_001790536.1 KEGG: reh:H16_A1052 NADH dehydrogenase chain C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_001790537.1 Catalyzes the transfer of electrons from NADH to quinone YP_001790538.1 KEGG: ajs:Ajs_0961 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_001790539.1 KEGG: mpt:Mpe_A1408 NADH dehydrogenase (quinone); TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit YP_001790540.1 TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: ferredoxin; molybdopterin oxidoreductase; KEGG: mpt:Mpe_A1409 putative NADH dehydrogenase I chain G YP_001790541.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: mpt:Mpe_A1410 NADH-ubiquinone oxidoreductase, chain H YP_001790542.1 Catalyzes the transfer of electrons from NADH to quinone YP_001790543.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: mpt:Mpe_A1412 NADH-ubiquinone oxidoreductase, chain J YP_001790544.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: mpt:Mpe_A1413 putative transmembrane NADH dehydrogenase I (chain K) oxidoreductase protein YP_001790545.1 KEGG: mpt:Mpe_A1414 NADH dehydrogenase (quinone); TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I) YP_001790546.1 KEGG: mpt:Mpe_A1415 NADH dehydrogenase (quinone); TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_001790547.1 Catalyzes the transfer of electrons from NADH to quinone YP_001790548.1 PFAM: NUDIX hydrolase; KEGG: mpt:Mpe_A1418 ADP-ribose pyrophosphatase YP_001790549.1 PFAM: protein of unknown function DUF1178; KEGG: mpt:Mpe_A1419 hypothetical protein YP_001790550.1 PFAM: FAD linked oxidase domain protein; KEGG: mpt:Mpe_A1420 putative oxidoreductase protein YP_001790551.1 KEGG: mpt:Mpe_A1421 putative transmembrane protein YP_001790552.1 PFAM: ribonuclease BN; KEGG: mpt:Mpe_A1422 putative ribonuclease BN transmembrane protein YP_001790553.1 KEGG: mpt:Mpe_A2920 aerotaxis sensor receptor; TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001790554.1 PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_A1356 alpha/beta hydrolase fold protein YP_001790555.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol YP_001790556.1 PFAM: CBS domain containing protein; KEGG: mpt:Mpe_A1423 hypothetical protein YP_001790557.1 PFAM: CheW domain protein; KEGG: mpt:Mpe_A0587 chemotaxis signal transduction protein YP_001790558.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_001790559.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: dar:Daro_1148 chemotaxis-specific methylesterase YP_001790560.1 stimulates methylation of MCP proteins; KEGG: hch:HCH_03704 chemotaxis protein, stimulates methylation of MCP protein YP_001790561.1 PFAM: MCP methyltransferase CheR-type; KEGG: aav:Aave_3546 MCP methyltransferase, CheR-type YP_001790562.1 PFAM: CheW domain protein; KEGG: cvi:CV_1012 signal transduction chemotaxis protein YP_001790563.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; PAS fold-4 domain protein; KEGG: aha:AHA_1033 methyl-accepting chemotaxis protein YP_001790564.1 TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: asa:ASA_3269 methyl-accepting chemotaxis protein YP_001790565.1 KEGG: asa:ASA_3269 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_001790566.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: aha:AHA_1036 chemotaxis protein CheA YP_001790567.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: azo:azo0409 putative STAS domain protein YP_001790568.1 PFAM: response regulator receiver; KEGG: psp:PSPPH_0807 chemotaxis protein CheY YP_001790569.1 PFAM: response regulator receiver; KEGG: aha:AHA_1038 chemotaxis protein CheY YP_001790570.1 PFAM: chemotaxis sensory transducer; KEGG: pmy:Pmen_1571 methyl-accepting chemotaxis sensory transducer YP_001790571.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rfr:Rfer_2342 methyl-accepting chemotaxis sensory transducer YP_001790572.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; KEGG: vei:Veis_4873 diguanylate cyclase with PAS/PAC sensor YP_001790573.1 KEGG: aba:Acid345_0468 hypothetical protein YP_001790574.1 KEGG: mca:MCA2189 cytochrome c family protein YP_001790575.1 TIGRFAM: cytochrome C family protein; KEGG: aba:Acid345_0471 hypothetical protein YP_001790576.1 PFAM: Sporulation domain protein; KEGG: mca:MCA2191 hypothetical protein YP_001790577.1 KEGG: mpt:Mpe_A1215 heme ABC export system, ATP-binding protein CcmA; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase YP_001790578.1 TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: mpt:Mpe_A1214 ABC transporter, permease domain protein YP_001790579.1 TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: mpt:Mpe_A1213 ABC transporter, permease domain protein YP_001790581.1 PFAM: CcmE/CycJ protein; KEGG: mpt:Mpe_A1212 CcmE/CycJ protein YP_001790582.1 TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: mpt:Mpe_A1211 cytochrome c-type biogenesis protein (CcmF) YP_001790583.1 TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mpt:Mpe_A1210 periplasmic protein thiol:disulfide oxidoreductase DsbE YP_001790584.1 PFAM: cytochrome C biogenesis protein; KEGG: mpt:Mpe_A1209 C-type cytochrome biogenesis protein YP_001790585.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mpt:Mpe_A1208 TPR repeat protein YP_001790586.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_2667 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001790587.1 Displays esterase activity toward palmitoyl-CoA and pNP-butyrate YP_001790588.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rso:RSc0808 probable low specificity L-threonine aldolase protein YP_001790589.1 PFAM: Integrase catalytic region; KEGG: bxe:Bxe_B0052 putative transposase YP_001790590.1 PFAM: protein of unknown function DUF182; KEGG: rso:RSc1463 hypothetical protein YP_001790591.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine YP_001790592.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: ajs:Ajs_1937 glycine cleavage system H protein YP_001790593.1 TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: mpt:Mpe_A1433 glycine cleavage system T protein YP_001790594.1 Required for efficient pilin antigenic variation YP_001790595.1 PFAM: metallophosphoesterase; KEGG: bur:Bcep18194_C6632 metallophosphoesterase YP_001790596.1 KEGG: bvi:Bcep1808_5498 hypothetical protein YP_001790597.1 PFAM: PilT protein domain protein; KEGG: gvi:gll3555 hypothetical protein YP_001790598.1 TIGRFAM: prevent-host-death family protein; KEGG: gvi:gsl3556 hypothetical protein YP_001790599.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) YP_001790601.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pol:Bpro_3047 TonB-dependent siderophore receptor YP_001790602.1 PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: pna:Pnap_2559 2OG-Fe(II) oxygenase YP_001790603.1 TIGRFAM: TonB family protein; KEGG: mpt:Mpe_A3718 periplasmic protein/biopolymer transport YP_001790604.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mpt:Mpe_A3719 MotA/TolQ/ExbB proton channel family protein YP_001790605.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mpt:Mpe_A3720 biopolymer transport protein ExbD/TolR YP_001790606.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mes:Meso_0341 two component transcriptional regulator, LuxR family YP_001790607.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: eba:ebA3794 complex two-component hybrid sensor component containing histidine kinase and response receiver domain YP_001790608.1 KEGG: mpt:Mpe_A3735 cytochrome c-551 precursor YP_001790609.1 TIGRFAM: S-adenosylmethionine--tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: mpt:Mpe_A3736 putative queuosine S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_001790610.1 TIGRFAM: addiction module antidote; PFAM: SpoVT/AbrB domain protein; KEGG: rfr:Rfer_3405 transcriptional regulator/antitoxin, MazE YP_001790611.1 TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: rfr:Rfer_3404 death-on-curing protein YP_001790612.1 catalyzes branch migration in Holliday junction intermediates YP_001790613.1 PFAM: regulatory protein TetR; KEGG: rfr:Rfer_3529 transcriptional regulator, TetR family YP_001790614.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0826 putative ATP-binding ABC transporter protein YP_001790615.1 PFAM: ABC-2 type transporter; KEGG: mpt:Mpe_A0827 putative transmembrane protein YP_001790616.1 PFAM: BolA family protein; KEGG: mpt:Mpe_A0828 transcriptional regulator BolA superfamily-like protein YP_001790617.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_001790618.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ YP_001790619.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer YP_001790620.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_001790621.1 PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: mpt:Mpe_A0833 imidazoleglycerol-phosphate dehydratase YP_001790622.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_001790623.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide YP_001790624.1 TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: pna:Pnap_0701 imidazoleglycerol phosphate synthase, cyclase subunit YP_001790625.1 PFAM: protein of unknown function DUF1555; KEGG: nmu:Nmul_A2031 hypothetical protein YP_001790626.1 KEGG: ana:all7120 unknown protein YP_001790627.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpt:Mpe_A0581 response regulator protein YP_001790628.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mpt:Mpe_A0582 signal transduction histidine kinase-like protein YP_001790629.1 KEGG: mpt:Mpe_A0583 hypothetical protein YP_001790630.1 PFAM: response regulator receiver; KEGG: mpt:Mpe_A0584 chemotaxis signal transduction protein CheY YP_001790631.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: mpt:Mpe_A0585 chemotaxis protein histidine kinase YP_001790632.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: aav:Aave_0035 methyl-accepting chemotaxis sensory transducer YP_001790633.1 PFAM: chemotaxis sensory transducer; KEGG: aav:Aave_0168 methyl-accepting chemotaxis sensory transducer YP_001790634.1 PFAM: protein of unknown function DUF214; KEGG: mpt:Mpe_A0810 putative transmembrane protein YP_001790635.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: mpt:Mpe_A0756 hypothetical protein YP_001790636.1 PFAM: protein of unknown function DUF34; KEGG: mpt:Mpe_A0845 hypothetical protein YP_001790637.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: mpt:Mpe_A0844 putative HtrA-like serine protease signal peptide protein YP_001790638.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: rfr:Rfer_2958 sec-independent protein translocase TatC YP_001790639.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: mpt:Mpe_A0842 sec-independent translocase YP_001790640.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes YP_001790641.1 PFAM: histidine triad (HIT) protein; KEGG: mpt:Mpe_A0840 hypothetical protein YP_001790642.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: mpt:Mpe_A0838 phosphoribosyl-ATP pyrophosphatase YP_001790643.1 PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: aav:Aave_1048 phosphoribosyl-AMP cyclohydrolase YP_001790644.1 KEGG: mpt:Mpe_A0846 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA YP_001790645.1 TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: mpt:Mpe_A3743 UbiA prenyltransferase YP_001790646.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: ccr:CC_0740 sensory box/GGDEF family protein YP_001790647.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A3739 oxidative stress regulatory protein OxyR YP_001790648.1 PFAM: cytochrome c class I; KEGG: mpt:Mpe_A1095 cytochrome c553-like protein YP_001790649.1 KEGG: mpt:Mpe_A1096 hypothetical protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_001790650.1 TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: mpt:Mpe_A3077 flagellar biosynthesis protein YP_001790651.1 TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: mpt:Mpe_A3078 flagellar biosynthesis protein YP_001790652.1 PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; KEGG: mpt:Mpe_A3079 flagellar GTP-binding protein YP_001790653.1 KEGG: mpt:Mpe_A3080 antiactivator of flagellar biosynthesis YP_001790654.1 KEGG: mpt:Mpe_A3081 DNA-directed RNA polymerase specialized sigma subunit; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2 YP_001790655.1 PFAM: chemotaxis sensory transducer; KEGG: mpt:Mpe_A3082 methyl-accepting chemotaxis protein YP_001790656.1 KEGG: pol:Bpro_3703 hypothetical protein YP_001790657.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: aav:Aave_0314 hemerythrin-like metal-binding protein YP_001790658.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: mpt:Mpe_A3745 putative glutamic dehyrogenase YP_001790659.1 KEGG: mpt:Mpe_A3746 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_001790660.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain YP_001790661.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: mpt:Mpe_A3749 putative leucine-responsive regulatory protein YP_001790662.1 PFAM: alanine racemase domain protein; KEGG: bmu:Bmul_2655 alanine racemase domain protein YP_001790663.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: mpt:Mpe_A3760 pili biogenesis ATPase YP_001790664.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: mpt:Mpe_A3762 pili biogenesis ATPase YP_001790665.1 PFAM: ATP-binding region ATPase domain protein; KEGG: bbr:BB2739 probable two-component sensor histidine kinase YP_001790666.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpt:Mpe_A3237 response regulator YP_001790667.1 KEGG: stp:Strop_1435 hypothetical protein YP_001790668.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: aav:Aave_0633 3-hydroxyisobutyrate dehydrogenase YP_001790669.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: ajs:Ajs_0416 transport-associated YP_001790670.1 TIGRFAM: phosphoheptose isomerase; KEGG: mpt:Mpe_A3765 phosphoheptose isomerase YP_001790671.1 PFAM: protein of unknown function UPF0102; KEGG: aav:Aave_0630 protein of unknown function UPF0102 YP_001790672.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mpt:Mpe_A3767 hypothetical protein YP_001790673.1 KEGG: mpt:Mpe_A0661 signal transduction protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001790674.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: mpt:Mpe_A2132 oligopeptidase A YP_001790675.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate YP_001790676.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mpt:Mpe_A2130 response regulator protein YP_001790677.1 KEGG: mpt:Mpe_A2129 putative two-component transmembrane sensor histidine kinase transcription regulator protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001790678.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC YP_001790679.1 KEGG: mpt:Mpe_A2127 dihydrolipoamide S-succinyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein YP_001790680.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ajs:Ajs_2096 dihydrolipoamide dehydrogenase YP_001790681.1 PFAM: beta-lactamase domain protein; KEGG: mpt:Mpe_A2919 beta-lactamase related protein YP_001790682.1 KEGG: mpt:Mpe_A2133 hypothetical protein YP_001790683.1 PFAM: ApbE family lipoprotein; KEGG: abo:ABO_2002 thiamine biosynthesis lipoprotein, putative YP_001790684.1 PFAM: protein of unknown function DUF839; KEGG: pol:Bpro_1725 twin-arginine translocation pathway signal YP_001790685.1 PFAM: transcriptional regulator domain protein; KEGG: rme:Rmet_2180 two component transcriptional regulator, winged helix family YP_001790686.1 TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: dar:Daro_3562 phosphate binding protein YP_001790687.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: net:Neut_0238 phosphate ABC transporter, inner membrane subunit PstC YP_001790688.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eba:ebA4829 phosphate ABC transporter, permease protein YP_001790689.1 KEGG: mfa:Mfla_0792 phosphate transport system permease protein 1; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_001790690.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: mpt:Mpe_A1276 putative phosphate transport system protein YP_001790691.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mpt:Mpe_A1277 phosphate regulon two-component system response regulator YP_001790693.1 PFAM: nitroreductase; KEGG: rfr:Rfer_3637 nitroreductase YP_001790694.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mpt:Mpe_A2463 putative cold shock protein YP_001790695.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: mpt:Mpe_A2462 hypothetical protein YP_001790696.1 KEGG: mpt:Mpe_A2461 putative ATP-dependent clp protease ATP-binding subunit; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase YP_001790697.1 PFAM: protein of unknown function DUF980; KEGG: mpt:Mpe_A2460 hypothetical protein YP_001790698.1 TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; KEGG: ajs:Ajs_1619 UDP-2,3-diacylglucosamine hydrolase YP_001790699.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mpt:Mpe_A2458 peptidyl-prolyl cis-trans isomerase B YP_001790700.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mpt:Mpe_A2457 peptidylprolyl isomerase YP_001790701.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rfr:Rfer_1347 ErfK/YbiS/YcfS/YnhG YP_001790702.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_001790703.1 PFAM: HhH-GPD family protein; KEGG: mpt:Mpe_A2455 DNA-3-methyladenine glycosylase YP_001790704.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit; KEGG: mpt:Mpe_A2454 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha YP_001790705.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; KEGG: mpt:Mpe_A2453 putative cell cycle protein YP_001790706.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation. YP_001790707.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate YP_001790708.1 KEGG: pol:Bpro_3609 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein YP_001790709.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis YP_001790710.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde YP_001790711.1 KEGG: mpt:Mpe_A2160 putative transmembrane protein YP_001790712.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability YP_001790713.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: mpt:Mpe_A2158 phosphoribosylanthranilate isomerase YP_001790714.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_001790715.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis YP_001790716.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: mpt:Mpe_A2155 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta YP_001790717.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mpt:Mpe_A2154 bifunctional protein: folylpolyglutamate synthase and dihydrofolate synthase YP_001790718.1 PFAM: Sporulation domain protein; KEGG: mpt:Mpe_A2153 DedD protein YP_001790719.1 PFAM: Colicin V production protein; KEGG: mpt:Mpe_A2152 colicin V production protein YP_001790720.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway YP_001790721.1 KEGG: mpt:Mpe_A2150 cystathionine gamma-synthase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_001790722.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_001790723.1 KEGG: eba:ebA584 glucokinase; TIGRFAM: glucokinase; PFAM: Glucokinase YP_001790724.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bte:BTH_I1556 maltose ABC transporter, ATP-binding protein, putative YP_001790725.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pna:Pnap_3692 binding-protein-dependent transport systems inner membrane component YP_001790726.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_1096 binding-protein-dependent transport systems inner membrane component YP_001790727.1 PFAM: extracellular solute-binding protein family 1; KEGG: pna:Pnap_3689 extracellular solute-binding protein, family 1 YP_001790728.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: rfr:Rfer_1092 periplasmic sensor signal transduction histidine kinase YP_001790729.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dar:Daro_0429 response regulator receiver:transcriptional regulatory protein, C-terminal YP_001790730.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aav:Aave_3255 short-chain dehydrogenase/reductase SDR YP_001790731.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins YP_001790732.1 KEGG: mpt:Mpe_A1922 putative N utilization substance transcription regulator protein; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; NusA domain protein; SMART: KH domain protein YP_001790733.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex YP_001790734.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock YP_001790735.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: mpt:Mpe_A1919 pseudouridylate synthase YP_001790736.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: aav:Aave_3380 GTP-binding protein TypA YP_001790737.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mpt:Mpe_A1917 hypothetical protein YP_001790738.1 KEGG: sru:SRU_1591 hypothetical protein YP_001790739.1 TIGRFAM: pyridine nucleotide-disulfide oxidoreductase family protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsh:Rsph17029_3291 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001790740.1 PFAM: protein of unknown function DUF547; KEGG: mmw:Mmwyl1_0177 protein of unknown function DUF547 YP_001790741.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SNARE associated Golgi protein; KEGG: rfr:Rfer_1621 pyridine nucleotide-disulphide oxidoreductase dimerisation protein YP_001790743.1 PFAM: protein of unknown function DUF140; KEGG: sdn:Sden_0670 protein of unknown function DUF140 YP_001790744.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_2415 ABC transporter related YP_001790745.1 PFAM: Mammalian cell entry related domain protein; KEGG: sfu:Sfum_2416 mammalian cell entry related domain protein YP_001790746.1 KEGG: sfu:Sfum_2417 protein of unknown function DUF330 YP_001790747.1 PFAM: Patatin; KEGG: rfr:Rfer_0361 patatin YP_001790748.1 KEGG: hne:HNE_0662 YHS domain protein YP_001790749.1 KEGG: aeh:Mlg_0907 hypothetical protein YP_001790750.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pol:Bpro_2748 methyltransferase type 11 YP_001790751.1 PFAM: small multidrug resistance protein; KEGG: mac:MA1348 multidrug efflux pump YP_001790752.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_1618 phosphonate uptake transporter YP_001790753.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2238 phosphonate uptake transporter YP_001790754.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_2237 ABC transporter related YP_001790755.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: rfr:Rfer_1615 phosphonate-binding periplasmic protein YP_001790756.1 KEGG: rme:Rmet_2566 putative uncharacterized conserved protein YP_001790757.1 PFAM: protein of unknown function DUF323; KEGG: pol:Bpro_1756 protein of unknown function DUF323 YP_001790758.1 PFAM: glycosyl transferase group 1; KEGG: rfr:Rfer_1614 glycosyl transferase, group 1 YP_001790759.1 catalyzes the formation of selenophosphate from selenide and ATP YP_001790760.1 KEGG: dar:Daro_2471 hypothetical protein YP_001790761.1 TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: mpt:Mpe_A1916 tRNA-dihydrouridine synthase A YP_001790762.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pau:PA14_50060 hypothetical protein YP_001790763.1 KEGG: nmu:Nmul_A0828 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001790764.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mpt:Mpe_A1915 putative transmembrane protein YP_001790765.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A1906 putrescine transport system permease protein YP_001790766.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A1905 putrescine ABC transporter, permease protein YP_001790767.1 KEGG: mpt:Mpe_A1904 ATP-binding component of putrescine transport system; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_001790768.1 PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_1698 extracellular solute-binding protein, family 1 YP_001790769.1 PFAM: Aldehyde Dehydrogenase_; KEGG: mpt:Mpe_A1909 putative aldehyde dehydrogenase YP_001790770.1 PFAM: aminotransferase class-III; KEGG: mpt:Mpe_A1902 putative aminotransferase YP_001790771.1 PFAM: glutamine synthetase catalytic region; KEGG: mpt:Mpe_A1901 glutamate--ammonia ligase YP_001790772.1 PFAM: peptidase C26; KEGG: mpt:Mpe_A1900 glutamine amidotransferase-like protein YP_001790773.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: mpt:Mpe_A1899 oxidoreductase YP_001790774.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate YP_001790775.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: rfr:Rfer_0363 hemerythrin HHE cation binding protein YP_001790776.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: ajs:Ajs_2401 isocitrate lyase YP_001790777.1 TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); TGS domain protein; Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; KEGG: dac:Daci_4616 threonyl-tRNA synthetase YP_001790778.1 PFAM: initiation factor 3; KEGG: mpt:Mpe_A1887 putative translation initiation factor protein YP_001790779.1 PFAM: ribosomal protein L35; KEGG: aav:Aave_2857 ribosomal protein L35 YP_001790780.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_001790781.1 TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; KEGG: ajs:Ajs_2396 phenylalanyl-tRNA synthetase, alpha subunit YP_001790782.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily YP_001790783.1 TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: mpt:Mpe_A1882 integration host factor alpha-subunit YP_001790784.1 PFAM: regulatory protein MerR; KEGG: mpt:Mpe_A1881 putative transcriptional regulator YP_001790785.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_1389 TPR repeat YP_001790786.1 KEGG: mag:amb3790 large exoprotein involved in heme utilization or adhesion YP_001790787.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: cph:Cpha266_1841 TPR repeat-containing protein YP_001790788.1 KEGG: bxe:Bxe_A3797 hypothetical protein YP_001790789.1 KEGG: rpc:RPC_4192 hypothetical protein YP_001790790.1 KEGG: bam:Bamb_3149 ABC transporter related; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase YP_001790791.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: bam:Bamb_3148 type I secretion membrane fusion protein, HlyD family YP_001790792.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: bam:Bamb_3587 type I secretion membrane fusion protein, HlyD family YP_001790793.1 KEGG: noc:Noc_1818 type I secretion system ATPase, PrtD; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_001790794.1 KEGG: bam:Bamb_3147 outer membrane efflux protein YP_001790795.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate YP_001790796.1 TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: mpt:Mpe_A2774 alanyl aminopeptidase YP_001790797.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rfr:Rfer_2702 HAD-superfamily hydrolase subfamily IA, variant 3 YP_001790798.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: mpt:Mpe_A2773 peptide chain release factor 2 YP_001790799.1 PFAM: alpha/beta hydrolase fold; KEGG: mpt:Mpe_A2772 putative hydrolase protein YP_001790800.1 PFAM: CheW domain protein; KEGG: neu:NE1397 CheW-like domain YP_001790801.1 KEGG: pst:PSPTO_2441 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001790802.1 KEGG: scl:sce1544 hypothetical protein YP_001790803.1 PFAM: peptidase M50; KEGG: rso:RSc2524 hypothetical protein YP_001790804.1 KEGG: mpt:Mpe_A0031 hypothetical protein YP_001790805.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: mpt:Mpe_A0261 hypothetical protein YP_001790807.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: rfr:Rfer_3900 hypothetical protein YP_001790808.1 TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V RecC subunit; KEGG: dac:Daci_0520 exodeoxyribonuclease V, gamma subunit YP_001790809.1 TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: dac:Daci_0521 exodeoxyribonuclease V, beta subunit YP_001790810.1 TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: dac:Daci_0522 exodeoxyribonuclease V, alpha subunit YP_001790811.1 PFAM: Extracellular ligand-binding receptor; KEGG: reh:H16_A1414 ABC-type transporter, periplasmic component YP_001790812.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pna:Pnap_1503 TRAP dicarboxylate transporter, DctM subunit YP_001790813.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dac:Daci_2246 tripartite ATP-independent periplasmic transporter DctQ component YP_001790814.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpt:Mpe_A1026 response regulator protein YP_001790815.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; Cache type 2 domain protein; KEGG: mpt:Mpe_A1027 putative transmembrane sensor histidine kinase transcription regulator protein YP_001790816.1 PFAM: protein of unknown function DUF442; KEGG: mpt:Mpe_A1235 hypothetical protein YP_001790817.1 KEGG: mpt:Mpe_A1236 hypothetical protein YP_001790818.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_001790819.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpt:Mpe_A1238 hypothetical protein YP_001790820.1 KEGG: mpt:Mpe_A0481 periplasmic binding protein, putative YP_001790821.1 KEGG: mpt:Mpe_A0480 cytochrome c550 YP_001790822.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mpt:Mpe_A2583 sigma-54 activated regulatory protein YP_001790823.1 KEGG: pna:Pnap_0734 beta-lactamase domain protein YP_001790824.1 KEGG: mpt:Mpe_A2585 pyrroloquinoline quinone biosynthesis protein PqqB YP_001790825.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A2589 ABC efflux transporter, ATP-binding protein YP_001790826.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: vei:Veis_4977 40-residue YVTN family beta-propeller repeat protein YP_001790827.1 KEGG: pna:Pnap_0722 hypothetical protein YP_001790828.1 PFAM: ABC-2 type transporter; KEGG: mpt:Mpe_A2590 efflux ABC transporter, permease protein YP_001790829.1 KEGG: mpt:Mpe_A2591 hypothetical protein YP_001790830.1 KEGG: mpt:Mpe_A2592 hypothetical protein YP_001790831.1 KEGG: mpt:Mpe_A2593 hypothetical protein YP_001790832.1 KEGG: mpt:Mpe_A2594 hypothetical protein YP_001790833.1 PFAM: conserved hypothetical protein; KEGG: reh:H16_B1040 probable extra-cytoplasmic solute receptor YP_001790834.1 KEGG: pna:Pnap_3155 hypothetical protein YP_001790835.1 KEGG: reh:H16_B1261 hypothetical protein YP_001790836.1 PFAM: integrase family protein; KEGG: dac:Daci_3780 integrase family protein YP_001790837.1 PFAM: SCP-like extracellular; KEGG: mpt:Mpe_A3565 hypothetical protein YP_001790838.1 PFAM: protein of unknown function DUF519; KEGG: mpt:Mpe_A3717 hypothetical protein YP_001790839.1 PFAM: WD-40 repeat protein; KEGG: amr:AM1_4989 WD-repeat protein YP_001790840.1 SMART: TIR protein; KEGG: amr:AM1_4988 hypothetical protein YP_001790841.1 PFAM: peptidase M48 Ste24p; KEGG: nmu:Nmul_A1887 peptidase M48, Ste24p YP_001790843.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: mpt:Mpe_A0473 quinoprotein ethanol dehydrogenase, putative YP_001790844.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mpt:Mpe_A2523 molybdopterin biosynthesis protein YP_001790845.1 KEGG: mpt:Mpe_A2223 putative permease component of ABC transporter YP_001790846.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A2222 putative ATP-binding component of ABC transporter YP_001790847.1 KEGG: mpt:Mpe_A2221 hypothetical protein YP_001790848.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pna:Pnap_0048 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001790849.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: mpt:Mpe_A2581 tungsten-containing aldehyde:ferredoxin oxidoreductase YP_001790850.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pna:Pnap_0050 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001790851.1 PFAM: thiamineS protein; KEGG: mpt:Mpe_A2579 hypothetical protein YP_001790852.1 KEGG: mpt:Mpe_A2578 hypothetical protein YP_001790853.1 PFAM: GYD family protein; KEGG: reh:H16_B1698 hypothetical protein YP_001790854.1 PFAM: regulatory protein LysR; KEGG: bbr:BB2126 hypothetical protein YP_001790855.1 KEGG: mpt:Mpe_A2664 signal transduction protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001790856.1 PFAM: beta-lactamase domain protein; KEGG: mpt:Mpe_A0472 hydrolase, putative YP_001790857.1 KEGG: mpt:Mpe_A0471 hypothetical protein YP_001790858.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mpt:Mpe_A1076 iron transporter YP_001790859.1 KEGG: rfr:Rfer_1303 hypothetical protein YP_001790860.1 PFAM: regulatory protein MarR; KEGG: dac:Daci_3704 transcriptional regulator, MarR family YP_001790861.1 PFAM: BLUF domain protein; KEGG: mpt:Mpe_A1075 hypothetical protein YP_001790862.1 PFAM: GTP cyclohydrolase I; KEGG: mpt:Mpe_A1074 GTP cyclohydrolase I YP_001790863.1 KEGG: amr:AM1_A0167 hypothetical protein YP_001790864.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ajs:Ajs_3752 major facilitator superfamily MFS_1 YP_001790865.1 KEGG: mgm:Mmc1_0996 chromosome segregation ATPases-like protein YP_001790866.1 PFAM: Heavy metal transport/detoxification protein; KEGG: mpt:Mpe_A1641 chaperonin YP_001790867.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mpt:Mpe_A1640 P1 ATPase/HMA domain YP_001790868.1 PFAM: thioesterase superfamily protein; KEGG: dar:Daro_0435 hypothetical protein YP_001790869.1 PFAM: protein of unknown function DUF1624; KEGG: mpt:Mpe_A1762 conserved hypothetical protein MTH789 YP_001790870.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mpt:Mpe_A1764 putative exported isomerase YP_001790871.1 PFAM: BolA family protein; KEGG: bur:Bcep18194_A5212 BolA-like protein YP_001790872.1 TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; KEGG: mpt:Mpe_A1766 intracellular septation protein A YP_001790873.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: mpt:Mpe_A1767 methionine-S-oxide reductase YP_001790874.1 PFAM: protein of unknown function UPF0061; KEGG: mpt:Mpe_A1768 hypothetical protein YP_001790875.1 activates fatty acids by binding to coenzyme A YP_001790876.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: kpn:KPN_00261 hypothetical protein YP_001790878.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dar:Daro_3437 GCN5-related N-acetyltransferase YP_001790879.1 PFAM: protein of unknown function UPF0126; KEGG: sru:SRU_2560 UPF0126 domain protein YP_001790880.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rfr:Rfer_0850 lytic murein transglycosylase YP_001790881.1 PFAM: peptidase U32; KEGG: pna:Pnap_3025 peptidase U32 YP_001790882.1 PFAM: inner-membrane translocator; KEGG: mpt:Mpe_A1771 putative amino acid transmembrane transmembrane protein YP_001790883.1 PFAM: inner-membrane translocator; KEGG: pol:Bpro_2576 inner-membrane translocator YP_001790884.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A1773 putative amino-acid ATP-binding ABC transporter protein YP_001790885.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A1774 putative amino-acid ATP-binding ABC transporter protein YP_001790886.1 PFAM: transglutaminase domain protein; KEGG: dar:Daro_0510 transglutaminase-like YP_001790887.1 PFAM: thioesterase superfamily protein; KEGG: mpt:Mpe_A1780 hypothetical protein YP_001790888.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aav:Aave_2870 GCN5-related N-acetyltransferase YP_001790889.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_B1745 putative diguanylate cyclase (GGDEF domain) YP_001790890.1 KEGG: dac:Daci_2891 hypothetical protein YP_001790891.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: dac:Daci_2892 cytochrome-c peroxidase YP_001790892.1 KEGG: dac:Daci_2893 hypothetical protein YP_001790893.1 KEGG: ade:Adeh_3688 response regulator receiver domain protein (CheY-like) YP_001790894.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: mpt:Mpe_A1792 putative transcription accessory protein YP_001790895.1 KEGG: pna:Pnap_3051 hypothetical protein YP_001790896.1 KEGG: mpt:Mpe_A2501 PAP2 superfamily protein YP_001790897.1 PFAM: sulfatase; protein of unknown function DUF1705; KEGG: har:HEAR0049 putative sulfatase membrane protein YP_001790898.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xau:Xaut_3399 two component transcriptional regulator, winged helix family YP_001790899.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A3149 sensor histidine kinase YP_001790900.1 KEGG: art:Arth_1252 hypothetical protein YP_001790901.1 KEGG: art:Arth_1251 hypothetical protein YP_001790903.1 PFAM: Patatin; KEGG: art:Arth_1250 patatin YP_001790904.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mpt:Mpe_A1799 putative esterase/lipase YP_001790905.1 PFAM: GCN5-related N-acetyltransferase; thioesterase superfamily protein; KEGG: mpt:Mpe_A1800 thioesterase-like protein YP_001790906.1 PFAM: protein of unknown function DUF833; KEGG: mpt:Mpe_A1864 hypothetical protein YP_001790908.1 TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: mpt:Mpe_A1862 hypothetical protein YP_001790909.1 PFAM: aminodeoxychorismate lyase; KEGG: mpt:Mpe_A1861 hypothetical protein YP_001790910.1 PFAM: thymidylate kinase; KEGG: mpt:Mpe_A1860 thymidylate kinase YP_001790911.1 TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: mpt:Mpe_A1859 DNA-directed DNA polymerase YP_001790912.1 PFAM: type IV pilus assembly PilZ; KEGG: mpt:Mpe_A1858 type IV pilus assembly protein YP_001790913.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: mpt:Mpe_A1857 putative deoxyribonuclease YP_001790914.1 KEGG: rfr:Rfer_3578 hypothetical protein YP_001790915.1 KEGG: mpt:Mpe_A1813 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_001790916.1 PFAM: band 7 protein; KEGG: mpt:Mpe_A1927 putative membrane protein with protease subunit YP_001790917.1 PFAM: protein of unknown function DUF107; KEGG: mpt:Mpe_A1926 hypothetical protein YP_001790918.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: mpt:Mpe_A1925 lysine decarboxylase YP_001790919.1 KEGG: pna:Pnap_1103 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_001790920.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate YP_001790921.1 TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pna:Pnap_1106 glucose-1-phosphate adenylyltransferase YP_001790922.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose YP_001790923.1 KEGG: bxe:Bxe_B2201 phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_001790924.1 KEGG: mpt:Mpe_A3512 uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_001790925.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mpt:Mpe_A3511 MoxR-like ATPase YP_001790926.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A1573 putative oxidative stress resistance two-component transmembrane sensor histidine kinase transcription regulator protein YP_001790927.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation YP_001790928.1 PFAM: protein of unknown function DUF541; KEGG: mpt:Mpe_A1575 hypothetical protein YP_001790929.1 TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rfr:Rfer_2069 3-hydroxybutyrate dehydrogenase YP_001790930.1 PFAM: alpha/beta hydrolase fold; KEGG: mpt:Mpe_A1577 putative hydrolase protein YP_001790931.1 KEGG: mpt:Mpe_A1578 GTP diphosphokinase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein YP_001790932.1 TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: reu:Reut_A1350 polyhydroxyalkanoate synthesis repressor PhaR YP_001790933.1 PFAM: lipolytic protein G-D-S-L family; KEGG: ajs:Ajs_2271 lipolytic enzyme, G-D-S-L family YP_001790934.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A1816 ABC transporter, ATP-binding protein YP_001790935.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: ajs:Ajs_2268 RNA methyltransferase, TrmH family, group 3 YP_001790936.1 PFAM: Silent information regulator protein Sir2; KEGG: ajs:Ajs_2262 silent information regulator protein Sir2 YP_001790937.1 TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: mpt:Mpe_A1818 uracil phosphoribosyltransferase YP_001790938.1 KEGG: rfr:Rfer_2233 hypothetical protein YP_001790939.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mpt:Mpe_A1820 putative D-3-phosphoglycerate dehydrogenase oxidoreductase protein YP_001790940.1 PFAM: peptidase S45 penicillin amidase; KEGG: mpt:Mpe_A1822 penicillin amidase YP_001790941.1 KEGG: pau:PA14_58700 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_001790942.1 PFAM: type IV pilus assembly PilZ; KEGG: mpt:Mpe_B0017 hypothetical protein YP_001790943.1 KEGG: mpt:Mpe_A2850 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: putative methyltransferase YP_001790944.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell YP_001790945.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mpt:Mpe_A2033 putative arginine/proline rich protein YP_001790946.1 PFAM: regulatory protein TetR; KEGG: hau:Haur_2521 transcriptional regulator, TetR family YP_001790947.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_001790948.1 PFAM: FAD dependent oxidoreductase; KEGG: rme:Rmet_1140 FAD dependent oxidoreductase YP_001790949.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: mpt:Mpe_A1760 methionine aminopeptidase YP_001790950.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein YP_001790951.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S] YP_001790952.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: mpt:Mpe_A1254 subfamily M23B unassigned peptidase YP_001790953.1 KEGG: mpt:Mpe_A1253 L-isoaspartate(D-aspartate) O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_001790954.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate YP_001790955.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpt:Mpe_A1249 response regulator YP_001790956.1 PFAM: UspA domain protein; KEGG: pna:Pnap_0391 UspA domain protein YP_001790957.1 TIGRFAM: glutamate--cysteine ligase; KEGG: pol:Bpro_3399 glutamate--cysteine ligase, monofunctional YP_001790958.1 PFAM: ABC-2 type transporter; KEGG: mpt:Mpe_A0977 ABC transporter permease protein YP_001790959.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0978 ABC transporter, ATP-binding protein YP_001790960.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mpt:Mpe_A1955 putative peptidyl-prolyl cis-trans isomerase transmembrane protein YP_001790961.1 PFAM: histone family protein DNA-binding protein; KEGG: mpt:Mpe_A1956 DNA-binding protein Hu-beta YP_001790962.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mpt:Mpe_A1957 putative transmembrane protein YP_001790963.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mpt:Mpe_A1958 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001790964.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision YP_001790965.1 KEGG: mpt:Mpe_A1961 hypothetical protein YP_001790966.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_001790967.1 KEGG: mpt:Mpe_A1758 hypothetical protein YP_001790968.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mms:mma_0247 biopolymer transport protein ExbD YP_001790969.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: azo:azo0233 putative biopolymer transport protein ExbD YP_001790970.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mpt:Mpe_A1755 biopolymer transport ExbB protein YP_001790971.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pau:PA14_37730 putative TonB dependent receptor YP_001790972.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: mpt:Mpe_A1349 hypothetical protein YP_001790973.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: pol:Bpro_1987 protein of unknown function DUF395, YeeE/YedE YP_001790974.1 TIGRFAM: tol-pal system protein YbgF; PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: mpt:Mpe_A1348 putative transmembrane protein YP_001790975.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: mpt:Mpe_A1347 putative peptidoglycan-associated lipoprotein precursor YP_001790976.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA YP_001790977.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: rso:RSc2199 hypothetical protein YP_001790978.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: mpt:Mpe_A1344 putative ribonuclease G YP_001790979.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: rfr:Rfer_2081 Maf-like protein YP_001790980.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA YP_001790981.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: ajs:Ajs_1901 iojap-like protein YP_001790982.1 KEGG: mpt:Mpe_A1340 nicotinate-nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase YP_001790983.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis YP_001790984.1 KEGG: mpt:Mpe_A1338 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase YP_001790985.1 PFAM: protein of unknown function DUF28; KEGG: aav:Aave_3203 protein of unknown function DUF28 YP_001790986.1 PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: mpt:Mpe_A1336 hypothetical protein YP_001790987.1 PFAM: protein of unknown function DUF1499; KEGG: ana:all1003 hypothetical protein YP_001790988.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001790990.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: mpt:Mpe_A0029 PhnB protein YP_001790991.1 KEGG: plu:plu0597 hypothetical protein YP_001790992.1 KEGG: plu:plu0598 hypothetical protein YP_001790993.1 PFAM: Integrase catalytic region; KEGG: pol:Bpro_4706 integrase, catalytic region YP_001790994.1 PFAM: transposase IS3/IS911 family protein; KEGG: pol:Bpro_4705 hypothetical protein YP_001790996.1 PFAM: protein of unknown function DUF1428; KEGG: xcb:XC_3061 hypothetical protein YP_001790997.1 KEGG: xom:XOO_0504 hypothetical protein YP_001790998.1 KEGG: xom:XOO_0505 hypothetical protein YP_001791000.1 PFAM: acriflavin resistance protein; KEGG: pna:Pnap_1682 acriflavin resistance protein YP_001791001.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pol:Bpro_2282 secretion protein HlyD YP_001791002.1 PFAM: ribonuclease H; KEGG: rso:RSc1513 ribonuclease H YP_001791003.1 KEGG: pol:Bpro_2280 hypothetical protein YP_001791004.1 KEGG: vei:Veis_0591 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein YP_001791005.1 PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; KEGG: mpt:Mpe_A2530 membrane-bound lytic murein transglycosylase D, putative YP_001791006.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_001791007.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A2533 hypothetical protein YP_001791008.1 KEGG: mpt:Mpe_A2534 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_001791009.1 PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: ava:Ava_3213 AIR synthase related protein-like YP_001791010.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys YP_001791011.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate YP_001791012.1 KEGG: pol:Bpro_3522 hypothetical protein YP_001791013.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: aav:Aave_2987 short-chain dehydrogenase/reductase SDR YP_001791014.1 KEGG: dar:Daro_1045 hypothetical protein YP_001791015.1 KEGG: rme:Rmet_1154 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase YP_001791016.1 KEGG: mpt:Mpe_A1456 3-oxoacid CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase YP_001791017.1 PFAM: regulatory protein LuxR; KEGG: rfr:Rfer_2636 transcriptional regulator, LuxR family YP_001791018.1 KEGG: sfu:Sfum_0602 hypothetical protein YP_001791019.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rso:RSc0626 probable aldehyde dehydrogenase (subunit III) oxidoreductase protein YP_001791020.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: gme:Gmet_0837 twin-arginine translocation pathway signal YP_001791021.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pna:Pnap_1622 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_001791022.1 KEGG: mpt:Mpe_A1510 hypothetical protein YP_001791023.1 PFAM: histone deacetylase superfamily; KEGG: mpt:Mpe_A1507 hypothetical protein YP_001791024.1 TIGRFAM: phasin family protein; PFAM: Phasin family protein; KEGG: bmu:Bmul_1136 phasin family protein YP_001791026.1 PFAM: protein of unknown function DUF461; KEGG: dac:Daci_2890 protein of unknown function DUF461 YP_001791027.1 PFAM: electron transport protein SCO1/SenC; KEGG: dac:Daci_1998 electron transport protein SCO1/SenC YP_001791028.1 PFAM: protein of unknown function DUF461; KEGG: dac:Daci_2688 protein of unknown function DUF461 YP_001791029.1 KEGG: dra:DR_0834 nitrogen regulator, putative YP_001791031.1 KEGG: aav:Aave_0652 hypothetical protein YP_001791032.1 KEGG: mpt:Mpe_A1821 hypothetical protein YP_001791033.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001791034.1 TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: pna:Pnap_2630 4-aminobutyrate aminotransferase YP_001791035.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: mpt:Mpe_A2324 succinate-semialdehyde dehydrogenase (NAD(P)+) YP_001791036.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mpt:Mpe_A2326 GGDEF domain containing protein YP_001791038.1 KEGG: mpt:Mpe_A1569 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases YP_001791039.1 KEGG: mpt:Mpe_A1568 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase subfamily IB hypothetical 1; Haloacid dehalogenase domain protein hydrolase type 3 YP_001791040.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: har:HEAR2840 hypothetical protein YP_001791041.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity YP_001791042.1 PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain; KEGG: mpt:Mpe_A3415 disulfide reductase YP_001791043.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cte:CT1072 thiol:disulfide interchange protein DsbE, putative YP_001791044.1 PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_0039 major facilitator superfamily MFS_1 YP_001791045.1 KEGG: mpt:Mpe_A1550 hypothetical protein YP_001791047.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate YP_001791048.1 KEGG: mpt:Mpe_A1552 hypothetical protein YP_001791049.1 KEGG: mpt:Mpe_A1551 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_001791050.1 KEGG: mpt:Mpe_A1550 hypothetical protein YP_001791051.1 KEGG: mpt:Mpe_A1549 putative ATP-dependent protease (heat shock protein); TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase YP_001791052.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: aav:Aave_1248 molybdopterin biosynthesis MoaE YP_001791053.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: mpt:Mpe_A1545 molybdopterin converting factor subunit 1 YP_001791054.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mpt:Mpe_A1544 putative molybdopterin biosynthesis MoeA protein YP_001791055.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: mpt:Mpe_A1543 putative molybdopterin-guanine dinucleotide biosynthesis protein YP_001791056.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine YP_001791057.1 PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; KEGG: aav:Aave_1238 homoserine dehydrogenase YP_001791058.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor YP_001791059.1 PFAM: protein of unknown function DUF498; KEGG: mpt:Mpe_A1539 hypothetical protein YP_001791060.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mpt:Mpe_A1538 putative bacterioferritin comigratory oxidoreductase protein YP_001791061.1 PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: mpt:Mpe_A1537 PhoH-like ATPase YP_001791062.1 KEGG: mpt:Mpe_A1753 ATPase component ABC-type dipeptide/oligopeptide/nickel transport system; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001791063.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A1752 ABC type ATPase YP_001791064.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A1751 IM pore protein YP_001791065.1 PFAM: extracellular solute-binding protein family 5; KEGG: mpt:Mpe_A1750 putative extracellular solute-binding protein YP_001791066.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: mpt:Mpe_A1749 muramoyltetrapeptide carboxypeptidase YP_001791067.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mpt:Mpe_A1748 putative hydrolase protein YP_001791068.1 KEGG: nmu:Nmul_A1648 ATPase, E1-E2 type; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein YP_001791069.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: reh:H16_B1084 transcriptional regulator, AsnC-family YP_001791070.1 PFAM: protein of unknown function DUF534; KEGG: bbr:BB3356 hypothetical protein YP_001791071.1 PFAM: inner-membrane translocator; KEGG: reh:H16_A1398 ABC-type transporter, permease component YP_001791072.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rme:Rmet_1209 ABC transporter-related protein YP_001791073.1 PFAM: Glu/Leu/Phe/Val dehydrogenase; KEGG: rha:RHA1_ro03043 glutamate dehydrogenase (NAD(P)+) YP_001791074.1 KEGG: ppu:PP_3433 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_001791075.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pna:Pnap_1119 glyoxalase/bleomycin resistance protein/dioxygenase YP_001791076.1 KEGG: pol:Bpro_2996 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969 YP_001791077.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: sal:Sala_1825 transcriptional coactivator/pterin dehydratase YP_001791078.1 phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin YP_001791079.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_0167 short-chain dehydrogenase/reductase SDR YP_001791080.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: ajs:Ajs_1232 heavy metal efflux pump, CzcA family YP_001791081.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: pap:PSPA7_4014 heavy metal RND efflux membrane fusion protein, CzcB family YP_001791082.1 KEGG: pfo:Pfl_2394 heavy metal RND efflux outer membrane protein, CzcC family YP_001791083.1 KEGG: pol:Bpro_3494 hypothetical protein YP_001791084.1 KEGG: reu:Reut_A2520 hypothetical protein YP_001791085.1 PFAM: protein of unknown function DUF195; KEGG: mpt:Mpe_A1514 hypothetical protein YP_001791086.1 TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; PFAM: FAD dependent oxidoreductase; protein of unknown function DUF752; KEGG: mpt:Mpe_A1964 hypothetical protein YP_001791087.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit YP_001791088.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: mpt:Mpe_A1615 putative cystathionine beta-lyase YP_001791089.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_001791090.1 PFAM: cyclase/dehydrase; KEGG: mpt:Mpe_A1617 hypothetical protein YP_001791091.1 PFAM: protein of unknown function UPF0125; KEGG: mpt:Mpe_A1618 hypothetical protein YP_001791092.1 KEGG: mpt:Mpe_A1619 putative transmembrane protein YP_001791093.1 KEGG: mpt:Mpe_A1620 IMP dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase YP_001791094.1 PFAM: major facilitator superfamily MFS_1; KEGG: mpt:Mpe_A1621 tetracycline-efflux transporter YP_001791095.1 KEGG: bmu:Bmul_1287 GMP synthase, large subunit; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: glutamine amidotransferase class-I; GMP synthase domain protein YP_001791096.1 PFAM: Chloride channel core; KEGG: psb:Psyr_1486 Cl-channel, voltage gated YP_001791097.1 PFAM: thioesterase superfamily protein; KEGG: rfr:Rfer_3014 thioesterase superfamily YP_001791098.1 PFAM: protein of unknown function DUF480; KEGG: bmu:Bmul_3231 protein of unknown function DUF480 YP_001791099.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mpt:Mpe_A1448 short chain dehydrogenase YP_001791100.1 KEGG: pmy:Pmen_4512 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001791101.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: pol:Bpro_1895 electron-transferring-flavoprotein dehydrogenase YP_001791102.1 binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP) YP_001791103.1 catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans YP_001791104.1 PFAM: TPR repeat-containing protein; cellulose synthase operon C domain protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rme:Rmet_2252 cellulose synthase operon C-like protein YP_001791105.1 TIGRFAM: cellulose synthase operon protein YhjU; KEGG: mms:mma_1625 hypothetical protein YP_001791106.1 KEGG: bch:Bcen2424_1385 cellulose synthase (UDP-forming); TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ YP_001791107.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: msm:MSMEG_1594 enoyl-CoA hydratase YP_001791108.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mpt:Mpe_A1435 putative CoA ligase (AMP-forming) YP_001791109.1 TIGRFAM: lytic murein transglycosylase B; KEGG: mpt:Mpe_A1242 putative membrane-bound lytic murein transglycosylase B protein YP_001791110.1 PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A1802 putative ATP-binding ABC transporter protein YP_001791111.1 PFAM: Radical SAM domain protein; KEGG: mpt:Mpe_A2509 hypothetical protein YP_001791112.1 PFAM: OsmC family protein; KEGG: psa:PST_0169 organic hydroperoxide resistance protein YP_001791113.1 PFAM: Asparaginase/glutaminase; KEGG: mpt:Mpe_A1865 asparaginase YP_001791114.1 Represses a number of genes involved in the response to DNA damage YP_001791116.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA YP_001791117.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_001791118.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis YP_001791119.1 TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: mpt:Mpe_A1870 putative poly-beta-hydroxybutyrate polymerase transmembrane protein YP_001791120.1 KEGG: rfr:Rfer_2563 hypothetical protein YP_001791121.1 PFAM: protein of unknown function DUF152; KEGG: mpt:Mpe_A1871 hypothetical protein YP_001791122.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: mpt:Mpe_A1872 putative glutathione-S-transferase YP_001791123.1 PFAM: NUDIX hydrolase; KEGG: mpt:Mpe_A1874 hypothetical protein YP_001791124.1 KEGG: mpt:Mpe_A1875 putative ABC transporter; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase YP_001791125.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: mpt:Mpe_A1876 HlyD family secretion protein YP_001791126.1 TIGRFAM: outer membrane adhesin like proteiin; KEGG: prw:PsycPRwf_1167 putative outer membrane adhesin like proteiin YP_001791127.1 PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; KEGG: mpt:Mpe_A1878 hypothetical protein YP_001791128.1 KEGG: mpt:Mpe_A1879 hypothetical protein YP_001791129.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: mpt:Mpe_A1880 outer membrane protein YP_001791130.1 TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mpt:Mpe_A1081 arginase YP_001791131.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A1082 hypothetical protein YP_001791132.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: mpt:Mpe_A1083 putative molybdopterin biosynthesis protein YP_001791133.1 KEGG: mpt:Mpe_A1084 C-terminal processing peptidase; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41 YP_001791134.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mpt:Mpe_A1085 putative transport system ATP-binding protein YP_001791135.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A1086 ABC-type Fe3+ transport system, permease component YP_001791136.1 PFAM: Aldehyde Dehydrogenase_; KEGG: pna:Pnap_3013 aldehyde dehydrogenase (NAD(+)) YP_001791137.1 PFAM: protein of unknown function DUF779; KEGG: aeh:Mlg_2727 protein of unknown function DUF779 YP_001791138.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis YP_001791139.1 PFAM: arsenate reductase and related; KEGG: aav:Aave_1859 arsenate reductase YP_001791140.1 PFAM: Roadblock/LC7 family protein; KEGG: noc:Noc_1488 Roadblock/LC7 YP_001791141.1 KEGG: noc:Noc_1486 ABC-type phosphate/phosphonate transport system periplasmic component YP_001791142.1 KEGG: mmw:Mmwyl1_3836 hypothetical protein YP_001791143.1 PFAM: protein of unknown function DUF839; KEGG: mpt:Mpe_A3526 hypothetical protein YP_001791144.1 KEGG: vei:Veis_2448 hypothetical protein YP_001791145.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine YP_001791146.1 PFAM: protein of unknown function DUF1415; KEGG: xac:XAC3675 hypothetical protein YP_001791147.1 PFAM: pyruvate carboxyltransferase; KEGG: mpt:Mpe_A3354 hydroxymethylglutaryl-CoA lyase YP_001791148.1 PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mpt:Mpe_A3356 putative acyl-CoA carboxylase alpha chain protein YP_001791149.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rso:RSc0267 enoyl-CoA hydratase YP_001791150.1 PFAM: carboxyl transferase; KEGG: mpt:Mpe_A3359 propionyl-CoA carboxylase YP_001791151.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mpt:Mpe_A3360 acyl-CoA dehydrogenase, probably isovaleryl-CoA dehydrogenase YP_001791152.1 PFAM: regulatory protein TetR; KEGG: mpt:Mpe_A3361 putative TetR family transcriptional regulator YP_001791153.1 KEGG: eba:ebA4129 hypothetical protein YP_001791154.1 PFAM: acyltransferase 3; KEGG: reu:Reut_B3984 acyltransferase 3 YP_001791155.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: mpt:Mpe_A2968 5-oxoprolinase (ATP-hydrolyzing) YP_001791156.1 PFAM: methyltransferase small; ribosomal L11 methyltransferase; Methyltransferase type 12; KEGG: azo:azo3853 hypothetical protein YP_001791157.1 KEGG: yli:YALI0B14795g hypothetical protein YP_001791158.1 PFAM: dihydrouridine synthase DuS; KEGG: ajs:Ajs_3192 dihydrouridine synthase, DuS YP_001791159.1 KEGG: ilo:IL0575 predicted secreted protein YP_001791160.1 PFAM: protein of unknown function DUF924; KEGG: bxe:Bxe_A3243 putative transmembrane protein YP_001791161.1 PFAM: ferredoxin; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: chy:CHY_2596 putative nitrate reductase YP_001791162.1 KEGG: afu:AF0417 A. fulgidus predicted coding region AF0417 YP_001791163.1 KEGG: pin:Ping_2136 hypothetical protein YP_001791165.1 PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aav:Aave_2437 radical SAM N-terminal domain protein YP_001791166.1 KEGG: mpt:Mpe_A1301 hypothetical protein YP_001791167.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo0660 ABC transporter permease and ATP-binding protein YP_001791168.1 PFAM: extracellular solute-binding protein family 3; KEGG: rfr:Rfer_2324 extracellular solute-binding protein, family 3 YP_001791169.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_2325 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine YP_001791170.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_2326 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine YP_001791171.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_2327 ABC transporter related YP_001791172.1 KEGG: pen:PSEEN0366 hypothetical protein YP_001791173.1 KEGG: pen:PSEEN0367 hypothetical protein YP_001791174.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rfr:Rfer_2438 transcriptional regulator, LysR family YP_001791175.1 PFAM: Carboxymuconolactone decarboxylase; Cupin 2 conserved barrel domain protein; KEGG: rfr:Rfer_2441 carboxymuconolactone decarboxylase YP_001791177.1 PFAM: aldo/keto reductase; KEGG: pde:Pden_3243 aldo/keto reductase YP_001791178.1 PFAM: sodium/calcium exchanger membrane region; KEGG: rfr:Rfer_1133 sodium/calcium exchanger membrane protein YP_001791179.1 PFAM: protein of unknown function DUF1504; KEGG: pol:Bpro_2221 protein of unknown function DUF1504 YP_001791180.1 KEGG: rfr:Rfer_2187 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase YP_001791181.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rfr:Rfer_2186 pyruvate flavodoxin/ferredoxin oxidoreductase-like YP_001791182.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: rfr:Rfer_2185 thiamine pyrophosphate enzyme-like TPP-binding YP_001791183.1 unknown function YP_001791184.1 PFAM: extracellular solute-binding protein family 1; KEGG: rsq:Rsph17025_1446 ABC-type uncharacterized transport system periplasmic component-like protein YP_001791185.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsh:Rsph17029_1833 ABC transporter, fused inner membrane subunits YP_001791186.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsh:Rsph17029_1834 ABC transporter related YP_001791187.1 PFAM: major facilitator superfamily MFS_1; KEGG: dar:Daro_1135 major facilitator superfamily MFS_1 YP_001791188.1 PFAM: cation efflux protein; KEGG: mpt:Mpe_A1655 hypothetical protein YP_001791189.1 PFAM: Disulphide bond formation protein DsbB; KEGG: psa:PST_0576 disulfide bond formation protein YP_001791190.1 KEGG: rfr:Rfer_0414 DsbA oxidoreductase YP_001791192.1 PFAM: GTP cyclohydrolase II; KEGG: reu:Reut_B4241 GTP cyclohydrolase II YP_001791193.1 PFAM: protein of unknown function DUF1302; KEGG: gme:Gmet_2248 hypothetical protein YP_001791194.1 PFAM: protein of unknown function DUF1329; KEGG: psa:PST_0616 hypothetical protein YP_001791195.1 KEGG: psa:PST_0617 glycosyl hydrolase YP_001791196.1 KEGG: psa:PST_0618 transporter, putative YP_001791197.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: ppf:Pput_2672 Rieske (2Fe-2S) domain protein YP_001791198.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: gur:Gura_2167 methyl-accepting chemotaxis sensory transducer YP_001791199.1 PFAM: HipA domain protein; KEGG: pol:Bpro_1570 hypothetical protein YP_001791200.1 KEGG: ppd:Ppro_3210 hypothetical protein YP_001791201.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_B4540 conserved hypothetical protein 698 YP_001791202.1 PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_5305 acyl-CoA synthetase YP_001791203.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rme:Rmet_0776 major facilitator superfamily MFS_1 YP_001791204.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dac:Daci_2009 alcohol dehydrogenase zinc-binding domain protein YP_001791205.1 PFAM: protein of unknown function DUF849; KEGG: reh:H16_B2526 hypothetical protein YP_001791206.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: reu:Reut_A2147 taurine dioxygenase YP_001791207.1 PFAM: regulatory protein LuxR; KEGG: bps:BPSS2291 GerE family regulatory protein YP_001791208.1 PFAM: SCP-like extracellular; SMART: Allergen V5/Tpx-1 family protein; KEGG: nve:NEMVE_v1g233975 predicted protein Pfam: SCP PROSITE: CRISP_1 YP_001791210.1 KEGG: ppd:Ppro_3130 hypothetical protein YP_001791214.1 KEGG: jan:Jann_1611 serine/threonine protein kinase YP_001791219.1 KEGG: reh:H16_B2382 putative helicase YP_001791226.1 KEGG: pna:Pnap_4720 hypothetical protein YP_001791228.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Prophage CP4-57 regulatory YP_001791231.1 PFAM: integrase family protein; KEGG: vei:Veis_2767 phage integrase family protein YP_001791232.1 KEGG: ppu:PP_3397 hypothetical protein YP_001791233.1 PFAM: Fibronectin type III domain protein; KEGG: pen:PSEEN2822 hypothetical protein YP_001791234.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: mms:mma_1067 cytosine/purine/uracil/thiamine/allantoin permease family protein (NCS1 family) YP_001791235.1 KEGG: dac:Daci_3294 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_001791236.1 KEGG: dvl:Dvul_0900 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_001791237.1 PFAM: hydroxyethylthiazole kinase; KEGG: rfr:Rfer_2472 hydroxyethylthiazole kinase YP_001791238.1 PFAM: carbohydrate kinase FGGY; KEGG: vei:Veis_2124 carbohydrate kinase, FGGY YP_001791239.1 TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; KEGG: vei:Veis_2123 protein of unknown function DUF718 YP_001791240.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_2122 inner-membrane translocator YP_001791241.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_2121 inner-membrane translocator YP_001791242.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_2120 ABC transporter related YP_001791243.1 TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_2119 rhamnose ABC transporter, periplasmic rhamnose-binding protein YP_001791244.1 TIGRFAM: L-rhamnose catabolism isomerase; PFAM: Xylose isomerase domain protein TIM barrel; KEGG: vei:Veis_2116 L-rhamnose catabolism isomerase YP_001791245.1 TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: class II aldolase/adducin family protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: vei:Veis_2115 rhamnulose-1-phosphate aldolase/alcohol dehydrogenase YP_001791246.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vei:Veis_2114 transcriptional regulator, LysR family YP_001791247.1 PFAM: peptidase M16 domain protein; KEGG: dac:Daci_3015 peptidase M16 domain protein YP_001791248.1 PFAM: protein of unknown function DUF344; KEGG: reh:H16_A1212 hypothetical protein YP_001791249.1 KEGG: rle:pRL70166 hypothetical protein YP_001791250.1 KEGG: gsu:GSU0551 hypothetical protein YP_001791251.1 PFAM: PfkB domain protein; KEGG: pfl:PFL_3076 fructokinase YP_001791252.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pna:Pnap_2602 periplasmic binding protein/LacI transcriptional regulator YP_001791253.1 PFAM: inner-membrane translocator; KEGG: pna:Pnap_2604 inner-membrane translocator YP_001791254.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_2605 ABC transporter related YP_001791255.1 PFAM: RbsD or FucU transport; KEGG: pol:Bpro_3206 RbsD or FucU transport YP_001791256.1 PFAM: ROK family protein; KEGG: pol:Bpro_3207 hypothetical protein YP_001791257.1 KEGG: mpt:Mpe_A1374 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases YP_001791258.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ppr:PBPRB1021 hypothetical protein YP_001791259.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis YP_001791260.1 PFAM: Fe(II) trafficking protein YggX; KEGG: mpt:Mpe_A1372 hypothetical protein YP_001791261.1 KEGG: bvi:Bcep1808_7770 hypothetical protein YP_001791263.1 KEGG: bwe:BcerKBAB4_5440 hypothetical protein YP_001791264.1 KEGG: aba:Acid345_3158 hypothetical protein YP_001791265.1 KEGG: pst:PSPTO_4044 hypothetical protein YP_001791266.1 PFAM: Prophage tail length tape measure; KEGG: rso:RSc1690 probable phage HK97 tail length TAPE measure-related protein YP_001791267.1 PFAM: Protein of unknown function DUF1799 phage-related; KEGG: aav:Aave_1781 hypothetical protein YP_001791269.1 KEGG: rsq:Rsph17025_2092 hypothetical protein YP_001791272.1 PFAM: protein of unknown function DUF1320; KEGG: pol:Bpro_3744 protein of unknown function DUF1320 YP_001791274.1 KEGG: mag:amb1768 Mu-like prophage major head subunit gpT YP_001791275.1 KEGG: rsq:Rsph17025_2097 hypothetical protein YP_001791276.1 KEGG: bvi:Bcep1808_1303 hypothetical protein YP_001791278.1 PFAM: putative head morphogenesis protein SPP1 gp7; KEGG: pol:Bpro_3784 phage putative head morphogenesis protein, SPP1 gp7 YP_001791279.1 PFAM: protein of unknown function DUF935; KEGG: bvi:Bcep1808_1306 protein of unknown function DUF935 YP_001791280.1 KEGG: pol:Bpro_3782 hypothetical protein YP_001791282.1 KEGG: stt:t1374 hypothetical protein YP_001791283.1 KEGG: bbr:BB3634 hypothetical protein YP_001791284.1 KEGG: bbr:BB3635 phage-related hypothetical protein YP_001791286.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: par:Psyc_0447 possible RNA-directed DNA polymerase (reverse transcriptase) YP_001791287.1 KEGG: par:Psyc_0448 hypothetical protein YP_001791288.1 KEGG: par:Psyc_0449 hypothetical protein YP_001791291.1 PFAM: Peptidase M15A; KEGG: bte:BTH_II1066 hypothetical protein YP_001791292.1 KEGG: mms:mma_3471 hypothetical protein YP_001791293.1 KEGG: sat:SYN_02332 hypothetical cytosolic protein YP_001791296.1 KEGG: aav:Aave_2905 putative transcriptional regulator, XRE family YP_001791297.1 KEGG: cvi:CV_2151 hypothetical protein YP_001791301.1 PFAM: regulatory protein IclR; KEGG: mfa:Mfla_2714 hypothetical protein YP_001791303.1 KEGG: hdu:HD1532 hypothetical protein YP_001791304.1 KEGG: bbr:BB3647 hypothetical protein YP_001791305.1 KEGG: sgl:SG0822 hypothetical protein YP_001791308.1 KEGG: mfa:Mfla_2720 hypothetical protein YP_001791309.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: pol:Bpro_3758 hypothetical protein YP_001791310.1 KEGG: bvi:Bcep1808_1319 hypothetical protein YP_001791311.1 PFAM: transposase IS3/IS911 family protein; KEGG: pol:Bpro_4705 hypothetical protein YP_001791312.1 PFAM: Integrase catalytic region; KEGG: pol:Bpro_4706 integrase, catalytic region YP_001791313.1 KEGG: mfa:Mfla_2721 hypothetical protein YP_001791315.1 KEGG: eca:ECA3696 putative phage regluatory protein YP_001791316.1 PFAM: Mor transcription activator domain protein; KEGG: cvi:CV_2165 probable bacteriophage transcriptional regulator YP_001791317.1 KEGG: shm:Shewmr7_0731 hypothetical protein YP_001791318.1 KEGG: son:SO_2678 hypothetical protein YP_001791320.1 PFAM: extracellular solute-binding protein family 1; KEGG: mpt:Mpe_A1371 putative iron binding protein component of ABC iron transporter YP_001791321.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: mpt:Mpe_A1370 putative HNS-like transcription regulator protein YP_001791322.1 PFAM: NLP/P60 protein; KEGG: mpt:Mpe_A2519 cell wall-associated hydrolase-like protein YP_001791323.1 KEGG: pna:Pnap_1689 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001791324.1 KEGG: mpt:Mpe_A1571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase YP_001791325.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: eba:ebA1639 predicted nucleoside-diphosphate-sugar epimerase YP_001791326.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: mpt:Mpe_A1570 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_001791327.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: syn:sll1555 two-component hybrid histidine kinase YP_001791328.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gvi:glr3562 two-component sensor histidine kinase YP_001791329.1 PFAM: Hemolysin-type calcium-binding region; Animal haem peroxidase; KEGG: ppu:PP_2561 secreted hemolysin-type calcium-binding bacteriocin, putative YP_001791330.1 PFAM: outer membrane efflux protein; KEGG: bam:Bamb_6370 type I secretion outer membrane protein, TolC family YP_001791331.1 KEGG: reh:H16_B0690 ABC-type RTX toxin transporter, ATPase and permease components: Prot1E family; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase YP_001791332.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: dvl:Dvul_1976 type I secretion membrane fusion protein, HlyD family YP_001791333.1 KEGG: dac:Daci_5392 hypothetical protein YP_001791334.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: aav:Aave_4649 protein of unknown function DUF894, DitE YP_001791335.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: mpt:Mpe_A3056 putative transmembrane protein YP_001791336.1 PFAM: protein of unknown function DUF1468; KEGG: mpt:Mpe_A3057 hypothetical protein YP_001791337.1 PFAM: Integrase catalytic region; KEGG: bpt:Bpet3733 putative transposase YP_001791338.1 KEGG: aav:Aave_4358 transposition helper protein YP_001791339.1 PFAM: protein of unknown function DUF637 hemagglutinin putative; KEGG: nma:NMA0690 hypothetical protein YP_001791340.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: mpt:Mpe_A3058 general secretory pathway related protein YP_001791341.1 KEGG: mpt:Mpe_A3059 spermidine synthase-like protein YP_001791342.1 KEGG: rfr:Rfer_3216 hypothetical protein YP_001791343.1 PFAM: TatD-related deoxyribonuclease; KEGG: vei:Veis_4583 TatD-related deoxyribonuclease YP_001791344.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: aav:Aave_1064 peptidase S1 and S6, chymotrypsin/Hap YP_001791345.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: pol:Bpro_3891 ATPase associated with various cellular activities, AAA_3 YP_001791346.1 PFAM: protein of unknown function DUF58; KEGG: pol:Bpro_3892 protein of unknown function DUF58 YP_001791347.1 PFAM: von Willebrand factor type A; KEGG: pol:Bpro_3893 von Willebrand factor, type A YP_001791349.1 KEGG: mpt:Mpe_A1065 polysaccharide biosynthesis protein, putative; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_001791350.1 PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_4866 major facilitator superfamily MFS_1 YP_001791351.1 KEGG: aav:Aave_3972 hypothetical protein YP_001791352.1 PFAM: dienelactone hydrolase; KEGG: azo:azo2340 dienelactone hydrolase family protein YP_001791353.1 KEGG: mpt:Mpe_A0606 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_001791354.1 PFAM: protein of unknown function DUF1555; KEGG: dar:Daro_1502 protein of unknown function DUF1555 YP_001791355.1 KEGG: tbd:Tbd_0523 hypothetical protein YP_001791356.1 KEGG: tbd:Tbd_0352 hypothetical protein YP_001791357.1 KEGG: mfa:Mfla_1718 protein of unknown function DUF1555 YP_001791358.1 KEGG: dar:Daro_3745 protein of unknown function DUF1555 YP_001791359.1 PFAM: Endoribonuclease L-PSP; KEGG: xac:XAC1371 hypothetical protein YP_001791360.1 PFAM: protein of unknown function DUF1703; KEGG: eba:ebA5943 hypothetical protein YP_001791361.1 KEGG: syn:ssl2065 hypothetical protein YP_001791362.1 KEGG: cph:Cpha266_0766 DNA polymerase, beta domain protein region YP_001791363.1 PFAM: protein of unknown function DUF86; KEGG: cph:Cpha266_0768 protein of unknown function DUF86 YP_001791364.1 PFAM: protein of unknown function DUF1703; KEGG: eba:ebA5943 hypothetical protein YP_001791365.1 PFAM: protein of unknown function DUF1703; KEGG: eba:ebA5943 hypothetical protein YP_001791366.1 PFAM: protein of unknown function DUF1703; KEGG: eba:ebA5943 hypothetical protein YP_001791367.1 PFAM: protein of unknown function DUF1703; KEGG: eba:ebA5943 hypothetical protein YP_001791368.1 KEGG: mfa:Mfla_1132 protein of unknown function DUF1555 YP_001791369.1 KEGG: nmu:Nmul_A1261 hypothetical protein YP_001791370.1 KEGG: rsp:RSP_4027 hypothetical protein with parallel beta-helix repeat YP_001791371.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: cpe:CPE0496 N-acetyl-mannosamine transferase YP_001791372.1 PFAM: glycosyl transferase family 2; KEGG: bra:BRADO4817 putative glycosyltransferase (family 2) YP_001791373.1 PFAM: glycosyl transferase group 1; KEGG: mfa:Mfla_2015 glycosyl transferase, group 1 YP_001791374.1 PFAM: glycoside hydrolase family 5; KEGG: psa:PST_2494 endoglucanase precursor(endo-1,4-beta-glucanase)protein YP_001791375.1 PFAM: glycosyl transferase family 2; KEGG: gsu:GSU1961 glycosyl transferase, group 2 family protein YP_001791376.1 PFAM: O-antigen polymerase; KEGG: pol:Bpro_1889 O-antigen polymerase YP_001791377.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: mpt:Mpe_A1061 membrane protein YP_001791378.1 KEGG: mpt:Mpe_A0629 mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein YP_001791379.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: mpt:Mpe_A2731 GDP-mannose 4,6-dehydratase YP_001791380.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: ret:RHE_CH00763 GDP-L-fucose synthase protein YP_001791381.1 TIGRFAM: EpsI family protein; KEGG: hch:HCH_03424 hypothetical protein YP_001791382.1 TIGRFAM: eight transmembrane protein EpsH; exosortase 2; PFAM: Eight transmembrane protein EpsH; KEGG: nmu:Nmul_A0246 hypothetical protein YP_001791384.1 TIGRFAM: addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: rso:RSc3225 hypothetical protein YP_001791385.1 KEGG: pol:Bpro_1568 hypothetical protein YP_001791390.1 KEGG: tte:TTE0277 cellulose biosynthesis protein YP_001791391.1 PFAM: protein of unknown function DUF820; KEGG: pna:Pnap_0294 protein of unknown function DUF820 YP_001791392.1 KEGG: pol:Bpro_4981 hypothetical protein YP_001791393.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mpt:Mpe_A0586 methyl-accepting chemotaxis protein YP_001791394.1 PFAM: Cache type 2 domain protein; KEGG: rpe:RPE_1803 cache, type 2 YP_001791395.1 TIGRFAM: capsular exopolysaccharide family; KEGG: mpt:Mpe_A2732 tyrosine kinase YP_001791396.1 TIGRFAM: chain length determinant protein EpsF; PFAM: lipopolysaccharide biosynthesis protein; KEGG: mpt:Mpe_A2733 chain length determinant protein YP_001791397.1 TIGRFAM: polysaccharide export protein EpsE; PFAM: polysaccharide export protein; KEGG: mpt:Mpe_A2734 capsular polysaccharide export protein, putative YP_001791398.1 TIGRFAM: peptidyl-prolyl cis-trans isomerase, EpsD family; KEGG: mpt:Mpe_A0738 hypothetical protein YP_001791399.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: azc:AZC_4534 transcriptional regulator YP_001791400.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001791401.1 activates fatty acids by binding to coenzyme A YP_001791402.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pnu:Pnuc_1539 TRAP dicarboxylate transporter, DctP subunit YP_001791403.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vei:Veis_4815 TRAP C4-dicarboxylate transport system permease DctM subunit YP_001791404.1 KEGG: bra:BRADO4016 hypothetical protein YP_001791405.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_0097 short-chain dehydrogenase/reductase SDR YP_001791406.1 PFAM: protein of unknown function DUF28; KEGG: pna:Pnap_3561 protein of unknown function DUF28 YP_001791407.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dac:Daci_4014 transcriptional regulator, LysR family YP_001791408.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_4524 uncharacterized protein UPF0065 YP_001791409.1 KEGG: pol:Bpro_4523 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001791410.1 PFAM: FAD dependent oxidoreductase; KEGG: aav:Aave_4507 D-amino-acid dehydrogenase YP_001791411.1 PFAM: transposase IS3/IS911 family protein; KEGG: pol:Bpro_4705 hypothetical protein YP_001791412.1 PFAM: Integrase catalytic region; KEGG: pol:Bpro_4706 integrase, catalytic region YP_001791413.1 PFAM: integrase family protein; KEGG: rfr:Rfer_1354 phage integrase YP_001791414.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP YP_001791415.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: mpt:Mpe_A2853 CBS domain protein YP_001791416.1 PFAM: SapC family protein; KEGG: pin:Ping_3347 SapC family protein YP_001791417.1 PFAM: protein of unknown function DUF1501; KEGG: aav:Aave_4705 protein of unknown function DUF1501 YP_001791418.1 PFAM: Protein of unknown function DUF1800; KEGG: aav:Aave_4704 hypothetical protein YP_001791419.1 KEGG: dar:Daro_1192 putative poly-gamma-glutamate biosynthesis enzyme YP_001791420.1 KEGG: dar:Daro_1193 hypothetical protein YP_001791421.1 PFAM: cyclic nucleotide-binding; KEGG: afw:Anae109_3203 cyclic nucleotide-binding protein YP_001791422.1 KEGG: pen:PSEEN4336 hypothetical protein YP_001791424.1 KEGG: noc:Noc_0133 conserved hypothetical ATP binding protein YP_001791426.1 KEGG: scl:sce1477 hypothetical protein YP_001791427.1 KEGG: mpt:Mpe_A2747 putative lipoprotein releasing system ATP-binding ABC transporter; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_001791428.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: mpt:Mpe_A2748 putative lipoprotein releasing system transmembrane YP_001791429.1 KEGG: mpt:Mpe_A2750 conserved hypothetical signal peptide protein YP_001791430.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: mpt:Mpe_A2751 putative single-stranded-DNA-specific exonuclease YP_001791431.1 PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_3951 extracellular ligand-binding receptor YP_001791432.1 PFAM: regulatory protein TetR; KEGG: dac:Daci_0571 transcriptional regulator, TetR family YP_001791433.1 KEGG: dac:Daci_0570 phenylacetate-CoA ligase; TIGRFAM: phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_001791434.1 TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: azo:azo0302 phenylacetic acid degradation protein PaaI YP_001791435.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: vei:Veis_3942 enoyl-CoA hydratase/isomerase YP_001791436.1 TIGRFAM: phenylacetic acid degradation protein PaaY; KEGG: mpt:Mpe_A0983 transferase YP_001791437.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: spe:Spro_3197 transcriptional regulator, LacI family YP_001791438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_0058 ABC transporter related YP_001791439.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_0059 inner-membrane translocator YP_001791440.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_0060 periplasmic binding protein/LacI transcriptional regulator YP_001791441.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mlo:mlr7629 hypothetical protein YP_001791442.1 PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; KEGG: vei:Veis_0056 inositol 2-dehydrogenase YP_001791443.1 PFAM: helix-turn-helix protein RpiR; KEGG: saq:Sare_3209 transcriptional regulator, RpiR family YP_001791444.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate YP_001791445.1 KEGG: reh:H16_A2424 hypothetical protein YP_001791446.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_A2423 predicted acyl-CoA transferase/carnitine dehydratase YP_001791447.1 PFAM: HpcH/HpaI aldolase; KEGG: pna:Pnap_3810 HpcH/HpaI aldolase YP_001791448.1 PFAM: fumarate lyase; KEGG: pna:Pnap_3811 fumarate lyase YP_001791449.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: pol:Bpro_4297 PAS/PAC sensor signal transduction histidine kinase YP_001791450.1 PFAM: Glutathione S-transferase domain; KEGG: pol:Bpro_3007 glutathione S-transferase-like YP_001791451.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A2421 transcriptional regulator, LysR-family YP_001791452.1 PFAM: conserved hypothetical protein; protein of unknown function DUF453; KEGG: pol:Bpro_4551 protein of unknown function DUF453 YP_001791453.1 KEGG: dac:Daci_5627 porin, gram-negative type YP_001791454.1 PFAM: NIPSNAP family containing protein; KEGG: bja:bll3657 hypothetical protein YP_001791455.1 PFAM: Shikimate dehydrogenase substrate binding domain protein; KEGG: pna:Pnap_2706 shikimate dehydrogenase YP_001791456.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pna:Pnap_2705 regulatory proteins, IclR YP_001791457.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: xau:Xaut_2701 fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_001791458.1 PFAM: RES domain protein; KEGG: ajs:Ajs_1583 hypothetical protein YP_001791459.1 KEGG: ajs:Ajs_1582 hypothetical protein YP_001791460.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine YP_001791461.1 PFAM: FAD dependent oxidoreductase; KEGG: mpt:Mpe_A1609 thiamine biosynthesis oxidoreductase ThiO, putative YP_001791462.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: mpt:Mpe_A1608 sulfur transfer protein YP_001791463.1 PFAM: thiazole biosynthesis family protein; KEGG: mpt:Mpe_A1607 thiamine biosynthesis protein ThiG YP_001791464.1 PFAM: thiamine monophosphate synthase; Phosphomethylpyrimidine kinase type-1; KEGG: mpt:Mpe_A1606 phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase YP_001791465.1 KEGG: dar:Daro_0513 hypothetical protein YP_001791466.1 PFAM: regulatory protein TetR; KEGG: mpt:Mpe_A1045 putative transcription regulator protein YP_001791467.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; KEGG: mpt:Mpe_A1042 putative L-isoaspartate O-methyltransferase YP_001791468.1 SMART: Rhodanese domain protein; KEGG: bur:Bcep18194_A4015 rhodanese-related sulfurtransferase YP_001791469.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: mpt:Mpe_A1041 type I secretion outer membrane efflux protein YP_001791470.1 KEGG: mpt:Mpe_A3522 hypothetical protein YP_001791471.1 PFAM: thiamineS protein; KEGG: ade:Adeh_2222 thiamineS YP_001791472.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: mpt:Mpe_A2140 putative 3-deoxy-D-manno-octulosonic-acid transferase transmembrane protein, gene YP_001791473.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: mpt:Mpe_A2141 phosphomannomutase YP_001791474.1 TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; KEGG: mpt:Mpe_A2816 HypA protein YP_001791475.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: rme:Rmet_1285 hydrogenase accessory protein HypB YP_001791476.1 KEGG: rme:Rmet_1284 hydrogenase maturation protein HypF YP_001791477.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: rme:Rmet_1283 hydrogenase assembly chaperone HypC/HupF YP_001791478.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: mpt:Mpe_A2812 HypD' protein YP_001791479.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: rme:Rmet_1281 hydrogenase expression/formation protein HypE YP_001791480.1 PFAM: Enoyl-CoA hydratase/isomerase; formyl transferase domain protein; KEGG: mpt:Mpe_A2809 putative sensor protein YP_001791481.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; KEGG: aha:AHA_2188 PAS YP_001791482.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: aha:AHA_2190 response regulator receiver:metal-dependent phosphohydrolase, HD subdomain YP_001791483.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: swi:Swit_3272 enoyl-CoA hydratase YP_001791484.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bpt:Bpet3943 2-hydroxyhepta-2,4-diene-1,7-dioateisomerase / 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioatedecarboxylase YP_001791485.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpt:Bpet3944 oxidoreductase YP_001791486.1 KEGG: aav:Aave_0753 hypothetical protein YP_001791487.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate YP_001791488.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: aav:Aave_0755 TRAP dicarboxylate transporter, DctP subunit YP_001791489.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_0756 transcriptional regulator, LysR family YP_001791490.1 PFAM: Aldehyde Dehydrogenase_; KEGG: pap:PSPA7_3072 probable aldehyde dehydrogenase YP_001791491.1 catalyzes the formation of propanoyl-CoA from methylmalonyl-CoA YP_001791492.1 KEGG: rfr:Rfer_1396 hypothetical protein YP_001791493.1 KEGG: pna:Pnap_3141 hypothetical protein YP_001791494.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: pna:Pnap_3140 AAA ATPase, central domain protein YP_001791495.1 PFAM: PspA/IM30 family protein; KEGG: pna:Pnap_3139 phage shock protein A, PspA YP_001791496.1 KEGG: pna:Pnap_3138 hypothetical protein YP_001791497.1 PFAM: Peptidoglycan-binding domain 1 protein; extracellular solute-binding protein family 1; KEGG: pna:Pnap_3137 extracellular solute-binding protein, family 1 YP_001791498.1 KEGG: pna:Pnap_3136 hypothetical protein YP_001791499.1 KEGG: pna:Pnap_3135 putative methyl-accepting chemotaxis sensory transducer YP_001791500.1 KEGG: azo:azo2712 GGDEF/PAS/PAC-domain containing protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001791501.1 PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: bpt:Bpet2661 hypothetical protein YP_001791502.1 TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: bbr:BB2019 penicillin-binding protein YP_001791503.1 PFAM: cobalamin B12-binding domain protein; KEGG: scl:sce4024 putative cobalamin binding protein YP_001791504.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding 8 domain protein; Ferric reductase domain protein transmembrane component domain; KEGG: mag:amb3335 predicted ferric reductase YP_001791505.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: psb:Psyr_2867 ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal YP_001791506.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: psb:Psyr_2868 response regulator receiver:transcriptional regulatory protein, C-terminal YP_001791507.1 PFAM: PfkB domain protein; KEGG: pde:Pden_5059 PfkB domain protein YP_001791508.1 KEGG: dar:Daro_2806 hypothetical protein YP_001791509.1 KEGG: acr:Acry_2734 glucose/sorbosone dehydrogenase-like protein YP_001791510.1 KEGG: dar:Daro_1441 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001791512.1 KEGG: lme:LEUM_1946 trypsin-like serine protease with PDZ domain YP_001791514.1 KEGG: pol:Bpro_3104 galactarate dehydratase; TIGRFAM: galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein YP_001791515.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_B4644 hypothetical protein YP_001791516.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: tbd:Tbd_0095 metallo-beta-lactamase superfamily protein YP_001791517.1 PFAM: GTP-binding protein HSR1-related; KEGG: rfr:Rfer_1388 GTP-binding YP_001791518.1 KEGG: sus:Acid_3833 hypothetical protein YP_001791519.1 PFAM: GTP cyclohydrolase II; KEGG: reu:Reut_B4241 GTP cyclohydrolase II YP_001791520.1 KEGG: rru:Rru_A1472 acetate CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase YP_001791521.1 KEGG: rpc:RPC_2004 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase YP_001791522.1 KEGG: aav:Aave_3997 hypothetical protein YP_001791523.1 KEGG: ajs:Ajs_1688 NAD(P)H dehydrogenase (quinone) YP_001791526.1 Catalyzes the formation of PRPP from ATP and ribose 5-phosphate YP_001791527.1 catalyzes the formation of thymine and 2-deoxy-alpha-D-ribose 1-phosphate from thymidine YP_001791528.1 KEGG: mpt:Mpe_A1032 general secretion pathway protein B YP_001791529.1 PFAM: Peptidoglycan-binding domain 1 protein; SMART: AAA ATPase; KEGG: mpt:Mpe_A1031 general secretion pathway protein A YP_001791530.1 PFAM: protein of unknown function DUF485; KEGG: pnu:Pnuc_0534 protein of unknown function DUF485 YP_001791531.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: pnu:Pnuc_0535 SSS sodium solute transporter superfamily YP_001791532.1 KEGG: dar:Daro_2754 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001791533.1 3'-5' exonuclease of DNA polymerase III YP_001791534.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: pna:Pnap_0480 cyclic nucleotide-binding protein YP_001791535.1 KEGG: mpt:Mpe_A1812 DNA ligase (NAD+); TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase YP_001791537.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance YP_001791538.1 KEGG: mpt:Mpe_A1948 hypothetical protein YP_001791539.1 KEGG: cvi:CV_1325 probable thiol-disulfide isomerase and thioredoxin YP_001791540.1 SMART: helicase c2; KEGG: mpt:Mpe_A0909 hypothetical protein YP_001791541.1 PFAM: beta-lactamase domain protein; KEGG: eba:ebA2905 hypothetical protein YP_001791542.1 PFAM: thioesterase superfamily protein; KEGG: pna:Pnap_1695 thioesterase superfamily protein YP_001791543.1 SMART: ZipA FtsZ-binding region; KEGG: mpt:Mpe_A1811 hypothetical protein YP_001791544.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: mpt:Mpe_A1810 putative chromosome partition protein YP_001791545.1 catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate YP_001791546.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway YP_001791547.1 KEGG: mpt:Mpe_A1805 hypothetical protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase YP_001791548.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica. YP_001791549.1 involved in methylation of ribosomal protein L3 YP_001791550.1 KEGG: mpt:Mpe_A0440 hypothetical protein YP_001791551.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive YP_001791552.1 PFAM: RNA-binding S4 domain protein; KEGG: bmu:Bmul_2211 hypothetical protein YP_001791553.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: mpt:Mpe_A2192 hypothetical protein YP_001791556.1 PFAM: MscS Mechanosensitive ion channel; KEGG: mpt:Mpe_A0411 putative transmembrane protein YP_001791557.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mfa:Mfla_1258 DEAD/DEAH box helicase-like protein YP_001791558.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pna:Pnap_2739 integral membrane sensor signal transduction histidine kinase YP_001791559.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pna:Pnap_2740 two component transcriptional regulator, winged helix family YP_001791560.1 KEGG: pna:Pnap_2741 hypothetical protein YP_001791561.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: asa:ASA_2813 phosphatidylglycerophosphate synthase YP_001791562.1 KEGG: mpt:Mpe_A2958 hypothetical protein YP_001791563.1 PFAM: protein of unknown function DUF692; KEGG: mpt:Mpe_A2959 hypothetical protein YP_001791564.1 KEGG: mpt:Mpe_A2960 putative signal peptide protein YP_001791565.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_001791566.1 KEGG: pol:Bpro_4893 hypothetical protein YP_001791567.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: ajs:Ajs_2807 2-nitropropane dioxygenase, NPD YP_001791568.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: ajs:Ajs_2808 acyl-CoA dehydrogenase domain protein YP_001791569.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: mpt:Mpe_A1297 electron transfer flavoprotein alpha-subunit YP_001791570.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dac:Daci_2390 electron transfer flavoprotein alpha/beta-subunit YP_001791571.1 KEGG: mpt:Mpe_A1295 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_001791572.1 KEGG: mpt:Mpe_A1294 endopeptidase La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001791573.1 binds and unfolds substrates as part of the ClpXP protease YP_001791574.1 KEGG: vei:Veis_4371 ATP-dependent Clp protease, proteolytic subunit ClpP; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_001791575.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer YP_001791576.1 PFAM: acriflavin resistance protein; KEGG: mpt:Mpe_A1290 putative transmembrane drug efflux protein YP_001791577.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: mpt:Mpe_A1289 putative transport/efflux transmembrane protein YP_001791578.1 TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; KEGG: mpt:Mpe_A1288 putative terpenoid synthase-related protein YP_001791579.1 TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: mpt:Mpe_A1287 putative phytoene synthase YP_001791580.1 TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mpt:Mpe_A1286 putative squalene/phytoene dehydrogenase YP_001791581.1 PFAM: manganese and iron superoxide dismutase; KEGG: mpt:Mpe_A2481 superoxide dismutase YP_001791582.1 KEGG: mpt:Mpe_A2482 exodeoxyribonuclease VII; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type YP_001791583.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mpt:Mpe_A2483 putative biopolymer transport ExbB-like transmembrane protein YP_001791584.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mpt:Mpe_A2484 putative biopolymer transport ExbD-related transmembrane protein YP_001791585.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate YP_001791586.1 PFAM: protein of unknown function DUF343; KEGG: mpt:Mpe_A2486 hypothetical protein YP_001791587.1 KEGG: mpt:Mpe_A2487 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase YP_001791588.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_001791589.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mpt:Mpe_A2489 putative short-chain dehydrogenase YP_001791590.1 PFAM: gamma-glutamyltranspeptidase; KEGG: ajs:Ajs_1042 gamma-glutamyltransferase YP_001791591.1 KEGG: mpt:Mpe_A2490 putative DNA primase protein; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein YP_001791592.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 non-essential domain protein; sigma-70 region 1.2; KEGG: mpt:Mpe_A2491 putative RNA polymerase sigma(sigma-70) factor transcription regulator protein YP_001791593.1 PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mpt:Mpe_A2492 adenylate cyclase family 3-like protein YP_001791594.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mpt:Mpe_A2493 hydrolase YP_001791595.1 PFAM: ferrochelatase; KEGG: mpt:Mpe_A2495 ferrochelatase YP_001791596.1 PFAM: porin Gram-negative type; KEGG: ajs:Ajs_0134 porin, gram-negative type YP_001791597.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: aav:Aave_3009 protein of unknown function DUF112, transmembrane YP_001791598.1 KEGG: pna:Pnap_1235 hypothetical protein YP_001791599.1 PFAM: conserved hypothetical protein; KEGG: pol:Bpro_2009 uncharacterized protein UPF0065 YP_001791600.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_2008 two component transcriptional regulator, winged helix family YP_001791601.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: pna:Pnap_1232 integral membrane sensor signal transduction histidine kinase YP_001791602.1 PFAM: RNA-binding S4 domain protein; KEGG: aav:Aave_2419 RNA-binding S4 domain protein YP_001791603.1 KEGG: rfr:Rfer_1228 hypothetical protein YP_001791604.1 KEGG: rfr:Rfer_1584 hypothetical protein YP_001791605.1 PFAM: GrpE protein; KEGG: mpt:Mpe_A2497 putative heat shock protein YP_001791606.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria YP_001791607.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion YP_001791608.1 PFAM: response regulator receiver; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; KEGG: rfr:Rfer_1420 response regulator receiver domain protein YP_001791609.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pau:PA14_05820 putative acyl-CoA transferase YP_001791610.1 PFAM: extracellular solute-binding protein family 3; KEGG: azo:azo2228 conserved hypothetical amino acid-binding protein YP_001791611.1 KEGG: azo:azo2227 GGDEF/EAL/PAS-domain containing protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001791612.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: mpt:Mpe_A2756 hypothetical protein YP_001791613.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pol:Bpro_1004 putative transmembrane protein YP_001791614.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: mpt:Mpe_A2757 hypothetical protein YP_001791615.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bur:Bcep18194_A5889 hypothetical protein YP_001791616.1 PFAM: protein of unknown function DUF205; KEGG: mpt:Mpe_A2760 putative transmembrane protein YP_001791617.1 PFAM: glutaredoxin YP_001791618.1 PFAM: aldo/keto reductase; KEGG: pna:Pnap_1076 aldo/keto reductase YP_001791619.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dar:Daro_3005 response regulator receiver:metal-dependent phosphohydrolase, HD subdomain YP_001791620.1 KEGG: azo:azo2482 putative hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001791621.1 PFAM: multicopper oxidase type 2; KEGG: pen:PSEEN2124 hypothetical protein YP_001791622.1 PFAM: Extracellular ligand-binding receptor; KEGG: har:HEAR0738 putative amino acid ABC transporter YP_001791624.1 PFAM: DNA polymerase III chi subunit HolC; KEGG: ajs:Ajs_1922 DNA polymerase III chi subunit, HolC YP_001791625.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: mpt:Mpe_A1942 leucyl aminopeptidase YP_001791626.1 PFAM: permease YjgP/YjgQ family protein; KEGG: mpt:Mpe_A1943 putative transmembrane protein YP_001791627.1 PFAM: permease YjgP/YjgQ family protein; KEGG: mpt:Mpe_A1944 hypothetical protein YP_001791628.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: mpt:Mpe_A1945 hypothetical protein YP_001791629.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A1946 transcriptional regulator CysB-like protein YP_001791630.1 PFAM: aminotransferase class I and II; KEGG: mpt:Mpe_A1947 putative pyridoxal phosphate aminotransferase protein YP_001791632.1 PFAM: Glutathione S-transferase domain; KEGG: mpt:Mpe_A1954 putative GST-related protein YP_001791633.1 PFAM: transglutaminase domain protein; KEGG: bmu:Bmul_4112 transglutaminase domain protein YP_001791634.1 PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bte:BTH_II1918 u1937b; B1937_F1_4 YP_001791635.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: mpt:Mpe_A2553 transglutaminase-like superfamily protein YP_001791636.1 PFAM: protein of unknown function DUF403; KEGG: mpt:Mpe_A2549 hypothetical protein YP_001791637.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: mpt:Mpe_A2550 hypothetical protein YP_001791638.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: mpt:Mpe_A2554 putative transporter DNA uptake transmembrane protein YP_001791639.1 PFAM: Endoribonuclease L-PSP; KEGG: mpt:Mpe_A2555 hypothetical protein YP_001791640.1 PFAM: Disulphide bond formation protein DsbB; KEGG: bbr:BB2601 disulfide bond formation protein B YP_001791641.1 PFAM: Lytic transglycosylase catalytic; KEGG: reh:H16_A0991 putative transglycosylase YP_001791642.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: rso:RSc2310 putative GspG-related transmembrane protein YP_001791643.1 PFAM: type II secretion system protein; KEGG: rme:Rmet_4712 type II secretion system protein YP_001791644.1 PFAM: type II secretion system protein E; KEGG: rme:Rmet_4711 type II secretion system protein E YP_001791646.1 KEGG: pfo:Pfl_1984 fimbrial assembly YP_001791647.1 KEGG: rso:RSc2305 probable transmembrane protein YP_001791648.1 KEGG: rso:RSc2304 putative proline rich transmembrane protein YP_001791649.1 PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; Tetratricopeptide TPR_2 repeat protein; KEGG: rso:RSc2303 probable GspD-related protein YP_001791650.1 KEGG: rso:RS02978 putative general secretion pathway GspG related transmembrane protein YP_001791651.1 PFAM: type II secretion system protein G; KEGG: rme:Rmet_4704 secretory pathway pseudopilin PulG YP_001791652.1 KEGG: mfa:Mfla_2411 hypothetical protein YP_001791653.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pna:Pnap_1536 integral membrane sensor signal transduction histidine kinase YP_001791654.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pna:Pnap_1535 two component transcriptional regulator, winged helix family YP_001791655.1 KEGG: neu:NE0315 possible multicopper oxidase YP_001791656.1 KEGG: ppf:Pput_2282 40-residue YVTN family beta-propeller repeat protein YP_001791657.1 PFAM: electron transport protein SCO1/SenC; KEGG: pfo:Pfl_1977 electron transport protein SCO1/SenC YP_001791658.1 KEGG: pfo:Pfl_1979 cytochrome c, putative YP_001791659.1 KEGG: ppf:Pput_2366 hypothetical protein YP_001791660.1 PFAM: Fibronectin type III domain protein; KEGG: gsu:GSU1844 IPT/TIG domain protein, putative YP_001791662.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_001791664.1 PFAM: OmpA/MotB domain protein; KEGG: rpd:RPD_1877 OmpA/MotB YP_001791665.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_001791666.1 KEGG: tcx:Tcr_0046 hypothetical protein YP_001791667.1 PFAM: major facilitator superfamily MFS_1; KEGG: mpt:Mpe_A2560 putative MFS transporter YP_001791669.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; Tellurite resistance methyltransferase, TehB, core; KEGG: rso:RSc1144 hypothetical protein YP_001791670.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis YP_001791671.1 PFAM: NlpBDapX family lipoprotein; KEGG: mpt:Mpe_A2564 putative transmembrane protein YP_001791672.1 PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: mpt:Mpe_A2568 hypothetical protein YP_001791673.1 KEGG: mpt:Mpe_A2569 putative FkbP-type peptidyl-prolyl cis-trans isomerase YP_001791674.1 KEGG: mpt:Mpe_A2570 dUTP diphosphatase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase YP_001791675.1 KEGG: mpt:Mpe_A2571 putative DNA/pantothenate metabolism flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein YP_001791676.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: azo:azo1830 putative TonB-denpendent receptor YP_001791677.1 PFAM: Rh family protein/ammonium transporter; KEGG: pol:Bpro_4891 Rh-like protein/ammonium transporter YP_001791678.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mpt:Mpe_A2088 putative ATP-dependent RNA helicase 1 YP_001791679.1 PFAM: GCN5-related N-acetyltransferase YP_001791680.1 KEGG: tcr:508175.329 60S ribosomal protein L19 YP_001791681.1 KEGG: mpt:Mpe_A2091 hypothetical protein; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit YP_001791682.1 PFAM: protein of unknown function DUF328; KEGG: pna:Pnap_3166 protein of unknown function DUF328 YP_001791683.1 KEGG: bpt:Bpet3332 hypothetical protein YP_001791685.1 KEGG: mpt:Mpe_A2297 putative endonuclease III protein; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein YP_001791686.1 PFAM: periplasmic binding protein; KEGG: pol:Bpro_2784 periplasmic binding protein YP_001791687.1 KEGG: pol:Bpro_1578 aspartate alpha-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: aspartate decarboxylase YP_001791688.1 PFAM: Phosphoglycerate mutase; KEGG: mpt:Mpe_A2301 fructose-2,6-biphosphatase YP_001791689.1 TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: mpt:Mpe_A2302 cobalamin-5-phosphate synthase YP_001791690.1 KEGG: dac:Daci_2816 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_001791691.1 TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: mpt:Mpe_A2304 cobyric acid synthase YP_001791692.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A2305 ferric-citrate ABC transporter ATPase YP_001791693.1 PFAM: transport system permease protein; KEGG: mpt:Mpe_A2306 iron(III) dicitrate-binding protein YP_001791694.1 PFAM: periplasmic binding protein; KEGG: mpt:Mpe_A2307 iron(III) dicitrate-binding protein YP_001791695.1 PFAM: cobalbumin biosynthesis protein; KEGG: mpt:Mpe_A2308 adenosyl cobinamide kinase (cobalamin-5-phosphate synthase) YP_001791696.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mpt:Mpe_A2309 TonB-dependent outer membrane cobalamin receptor YP_001791697.1 KEGG: mpt:Mpe_A2310 hypothetical protein YP_001791698.1 PFAM: protein of unknown function DUF710; KEGG: mpt:Mpe_A2311 hypothetical protein YP_001791699.1 PFAM: protein of unknown function DUF55; KEGG: bvi:Bcep1808_2542 protein of unknown function DUF55 YP_001791700.1 PFAM: protein of unknown function DUF81; KEGG: rfr:Rfer_2628 protein of unknown function DUF81 YP_001791701.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: mpt:Mpe_A2313 GGDEF domain containing protein YP_001791702.1 KEGG: pol:Bpro_3714 hypothetical protein YP_001791703.1 KEGG: mpt:Mpe_A2097 putative ferredoxin YP_001791704.1 PFAM: Rubrerythrin; KEGG: mpt:Mpe_A2098 putative oxidative stress related rubrerythrin protein YP_001791705.1 PFAM: ANTAR domain protein; KEGG: pol:Bpro_3275 response regulator receiver (CheY-like) and ANTAR domain protein YP_001791706.1 PFAM: major facilitator superfamily MFS_1; KEGG: mpt:Mpe_A2315 nitrate transporter YP_001791707.1 PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: mpt:Mpe_A2316 putative serine/threonine protein kinase YP_001791708.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mpt:Mpe_A2317 nitrite reductase (NAD(P)H), large subunit YP_001791709.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: rfr:Rfer_2558 nitrite reductase (NAD(P)H) large subunit, NirD YP_001791710.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mpt:Mpe_A2319 putative nitrate reductase YP_001791711.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: azo:azo0447 transcriptional regulatory protein YP_001791712.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: azo:azo0448 sensor histidine kinase YP_001791714.1 PFAM: NAD-glutamate dehydrogenase; KEGG: pol:Bpro_3020 NAD-glutamate dehydrogenase YP_001791715.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0446 putative polar amino acid transport system ATP-binding protein YP_001791716.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A0445 amino acid permease YP_001791717.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A0444 putative ABC transporter protein, putative glutamate/aspartate transmembrane subunit YP_001791718.1 PFAM: extracellular solute-binding protein family 3; KEGG: vei:Veis_1219 extracellular solute-binding protein, family 3 YP_001791719.1 KEGG: azo:azo0438 periplasmic L-asparaginase II; TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase YP_001791720.1 PFAM: glycosyl transferase family 3; KEGG: mpt:Mpe_A2320 hypothetical protein YP_001791721.1 catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent YP_001791722.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpt:Mpe_A1018 lactoylglutathione lyase YP_001791723.1 PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: ajs:Ajs_2043 carbamoyl-phosphate synthase L chain, ATP-binding YP_001791724.1 PFAM: carboxyl transferase; KEGG: pol:Bpro_2164 carboxyl transferase YP_001791725.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins YP_001791726.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_C7224 GCN5-related N-acetyltransferase YP_001791727.1 MDM; functions in conversion of succinate to propionate YP_001791728.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pna:Pnap_2384 transcriptional regulator, GntR family YP_001791729.1 KEGG: pna:Pnap_3953 succinyl-CoA synthetase, beta subunit; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein YP_001791730.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle YP_001791731.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH YP_001791732.1 PFAM: protein of unknown function DUF339; KEGG: mpt:Mpe_A2166 hypothetical protein YP_001791733.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: mpt:Mpe_A2167 succinate dehydrogenase (ubiquinone) YP_001791734.1 KEGG: mpt:Mpe_A2168 succinate dehydrogenase; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001791735.1 TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: mpt:Mpe_A2169 transmembrane succinate dehydrogenase (hydrophobic membrane anchor subunit) oxidoreductase protein YP_001791736.1 TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: mpt:Mpe_A2170 putative succinate dehydrogenase cytochrome b-556 subunit YP_001791737.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: mpt:Mpe_A2171 putative transcription regulator protein YP_001791738.1 catalyzes the oxidation of malate to oxaloacetate YP_001791739.1 KEGG: mpt:Mpe_A2173 putative lyase YP_001791740.1 KEGG: mpt:Mpe_A1366 putative signal peptide protein YP_001791741.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate YP_001791742.1 catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA YP_001791743.1 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates YP_001791744.1 KEGG: mpt:Mpe_A1064 hypothetical protein YP_001791745.1 TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: mpt:Mpe_A1065 polysaccharide biosynthesis protein, putative YP_001791746.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mpt:Mpe_A2856 GGDEF domain containing protein YP_001791747.1 KEGG: mpt:Mpe_A2857 sensory box/response regulator; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; SMART: PAC repeat-containing protein YP_001791748.1 KEGG: mpt:Mpe_A2858 signal transduction histidine kinase-like protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001791749.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A2859 bacteriophytochrome-like protein YP_001791750.1 KEGG: ade:Adeh_2645 cellulose biosynthesis (CelD)-like protein YP_001791751.1 PFAM: response regulator receiver; KEGG: mpt:Mpe_A2860 response regulator YP_001791752.1 KEGG: mpt:Mpe_A2861 signal transduction histidine kinase-like protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001791753.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: mpt:Mpe_A3062 signal transduction protein YP_001791754.1 TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: mpt:Mpe_A3063 flagellin-related hook-associated protein YP_001791755.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: mpt:Mpe_A3064 flagellar hook-associated protein YP_001791756.1 KEGG: mpt:Mpe_A3065 flagellum-specific muramidase; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2 YP_001791757.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum YP_001791758.1 PFAM: flagellar L-ring protein; KEGG: mpt:Mpe_A3067 flagellar basal-body L-ring protein YP_001791759.1 TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: mpt:Mpe_A3068 flagellar basal body and hook protein YP_001791760.1 TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; KEGG: mpt:Mpe_A3069 flagellar basal body and hook protein YP_001791761.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: bxe:Bxe_A0143 putative flagellar hook protein FlgE YP_001791762.1 PFAM: flagellar hook capping protein; KEGG: rfr:Rfer_3716 flagellar hook capping protein YP_001791763.1 TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: mpt:Mpe_A3072 flagellar basal body rod protein YP_001791764.1 TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: mpt:Mpe_A3073 flagellar basal body protein YP_001791765.1 TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: mpt:Mpe_A3074 flagellar basal body P-ring biosynthesis protein YP_001791766.1 PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: mpt:Mpe_A3075 negative regulator of flagellin synthesis (anti-S28 factor) YP_001791767.1 KEGG: mpt:Mpe_A3076 hypothetical protein YP_001791768.1 PFAM: Domain of unknown function DUF1801 YP_001791769.1 KEGG: mpt:Mpe_A1206 hypothetical protein YP_001791770.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis YP_001791771.1 PFAM: protein of unknown function DUF962; KEGG: psb:Psyr_0242 protein of unknown function DUF962 YP_001791772.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: mpt:Mpe_A3165 putative HNS-like transcription regulator protein YP_001791773.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pna:Pnap_2134 alcohol dehydrogenase, zinc-binding domain protein YP_001791774.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mfa:Mfla_1283 PAS/PAC sensor signal transduction histidine kinase YP_001791775.1 PFAM: chemotaxis sensory transducer; KEGG: dac:Daci_5410 methyl-accepting chemotaxis sensory transducer YP_001791776.1 PFAM: response regulator receiver; KEGG: dac:Daci_1873 response regulator receiver protein YP_001791777.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: reh:H16_A0643 uncharacterized protein required for formate dehydrogenase activity YP_001791778.1 KEGG: ade:Adeh_1032 hypothetical protein YP_001791779.1 KEGG: mca:MCA1389 formate dehydrogenase, delta subunit YP_001791780.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mpt:Mpe_A3710 NAD-dependent formate dehydrogenase alpha subunit YP_001791781.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mpt:Mpe_A3709 NADH dehydrogenase (quinone) YP_001791782.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: mpt:Mpe_A3708 NAD-dependent formate dehydrogenase gamma subunit YP_001791783.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pna:Pnap_0823 transcriptional regulator, LysR family YP_001791785.1 PFAM: protein of unknown function DUF59; KEGG: mpt:Mpe_A1163 putative iron sulfur binding protein YP_001791786.1 PFAM: ferredoxin; KEGG: mpt:Mpe_A1368 ferredoxin YP_001791787.1 KEGG: azc:AZC_0688 hypothetical protein YP_001791788.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_001791789.1 PFAM: protein of unknown function DUF1275; KEGG: pol:Bpro_0910 protein of unknown function DUF1275 YP_001791790.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: mpt:Mpe_A1160 sulfate transporter YP_001791791.1 KEGG: mpt:Mpe_A1158 hypothetical protein YP_001791792.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: mpt:Mpe_A1157 segregation and condensation protein A YP_001791793.1 KEGG: eba:ebA2924 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_001791794.1 TIGRFAM: guanosine monophosphate reductase; PFAM: IMP dehydrogenase/GMP reductase; KEGG: ajs:Ajs_3326 guanosine 5'-monophosphate oxidoreductase YP_001791795.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: bja:bll1362 hypothetical protein YP_001791796.1 PFAM: Patatin; KEGG: pol:Bpro_0732 patatin YP_001791797.1 PFAM: UvrD/REP helicase; KEGG: mpt:Mpe_A1142 DNA helicase II YP_001791798.1 PFAM: Ferritin Dps family protein; KEGG: ajs:Ajs_0378 ferritin, Dps family protein YP_001791799.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: mpt:Mpe_A2468 isocitrate dehydrogenase YP_001791800.1 KEGG: mpt:Mpe_A2469 putative transmembrane protein YP_001791801.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_001791802.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mpt:Mpe_A2471 transcription factor Fnr YP_001791803.1 KEGG: vei:Veis_1164 hypothetical protein YP_001791804.1 KEGG: pna:Pnap_3777 hypothetical protein YP_001791805.1 TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: pna:Pnap_3778 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001791806.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: mpt:Mpe_A2475 putative cytochrome c oxidase (subunit III) transmembrane protein YP_001791807.1 PFAM: Cbb3-type cytochrome oxidase component; KEGG: rfr:Rfer_1932 Cbb3-type cytochrome oxidase component YP_001791808.1 CcoO; FixO YP_001791809.1 CcoN; FixN YP_001791810.1 TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: dac:Daci_2774 cytochrome oxidase maturation protein, cbb3-type YP_001791811.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mpt:Mpe_A2479 putative cation transport P-type ATPase YP_001791812.1 PFAM: protein of unknown function DUF192; KEGG: mpt:Mpe_A2480 exported protein YP_001791813.1 PFAM: protein of unknown function DUF81; KEGG: mpt:Mpe_A1504 hypothetical protein YP_001791814.1 PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: mpt:Mpe_A1503 putative nitrite/sulfite reductase YP_001791815.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A1502 hypothetical protein YP_001791816.1 KEGG: mpt:Mpe_A1501 phosphoadenylyl-sulfate reductase (thioredoxin); TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase YP_001791817.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_001791818.1 KEGG: mpt:Mpe_A1499 sulfate adenylyltransferase; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding YP_001791819.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mpt:Mpe_A1498 uroporphyrin-III C-methyltransferase YP_001791820.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mpt:Mpe_A1497 ferredoxin YP_001791821.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dac:Daci_4658 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001791822.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: dac:Daci_0735 PAS/PAC sensor signal transduction histidine kinase YP_001791823.1 PFAM: Dual specificity protein phosphatase; SMART: Protein-tyrosine phosphatase, catalytic; KEGG: rpe:RPE_4503 ADP-ribosylation/crystallin J1 YP_001791824.1 KEGG: bbr:BB1386 hypothetical protein YP_001791825.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbr:BB1383 enoyl-(acyl carrier protein) reductase YP_001791827.1 PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: rfr:Rfer_2974 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase YP_001791828.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: rfr:Rfer_2975 acetate kinase YP_001791830.1 PFAM: nuclease (SNase domain protein); KEGG: nmu:Nmul_A2003 nuclease (SNase-like) YP_001791831.1 PFAM: Ethanolamine ammonia lyase large subunit; KEGG: mpt:Mpe_A2417 putative ethanolamine ammonia-lyase heavy chain protein YP_001791832.1 PFAM: Ethanolamine ammonia-lyase light chain; KEGG: pna:Pnap_2627 ethanolamine ammonia-lyase YP_001791833.1 KEGG: dac:Daci_4071 histone family protein nucleoid-structuring protein H-NS YP_001791834.1 PFAM: Metal-dependent hydrolase HDOD; SMART: serine/threonine protein kinase; KEGG: mpt:Mpe_A2971 serine/threonine protein kinase-like protein YP_001791835.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mpt:Mpe_A1283 thioredoxin 1 YP_001791836.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_001791837.1 PFAM: ribosomal protein L31; KEGG: mpt:Mpe_A1281 putative ribosomal protein L31 YP_001791838.1 KEGG: mpt:Mpe_A1280 hypothetical protein YP_001791839.1 KEGG: mpt:Mpe_A1278 putative phosphate regulon two-component system sensor kinase; TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein YP_001791840.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: mpt:Mpe_A1276 putative phosphate transport system protein YP_001791841.1 KEGG: mpt:Mpe_A1275 phosphate transport ATP-binding protein; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_001791842.1 Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions YP_001791843.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A1273 phosphate transport system permease protein YP_001791844.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mpt:Mpe_A1272 putative phosphate-binding periplasmic (pbp) ABC transporter protein YP_001791845.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate YP_001791846.1 KEGG: mpt:Mpe_A1269 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_001791847.1 KEGG: mpt:Mpe_A1268 vesicle-fusing ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001791848.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: mpt:Mpe_A1267 putative ribosomal RNA large subunit methyltransferase J YP_001791849.1 PFAM: protein of unknown function UPF0044; KEGG: mpt:Mpe_A1266 hypothetical protein YP_001791850.1 KEGG: mpt:Mpe_A1264 hypothetical protein YP_001791851.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: aav:Aave_2612 transcription elongation factor GreA YP_001791852.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: mpt:Mpe_A1262 putative carbamoyl-phosphate synthase (large chain) protein YP_001791853.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: pol:Bpro_2679 carbamoyl phosphate synthase small subunit YP_001791854.1 PFAM: protein of unknown function DUF336; KEGG: mpt:Mpe_A1258 hypothetical protein YP_001791855.1 PFAM: protein of unknown function UPF0005; KEGG: ajs:Ajs_2411 protein of unknown function UPF0005 YP_001791856.1 KEGG: mpt:Mpe_A1530 putative replicative DNA helicase protein; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase YP_001791857.1 PFAM: ribosomal protein L9; KEGG: mpt:Mpe_A1529 50S ribosomal protein L9 YP_001791858.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_001791859.1 KEGG: mpt:Mpe_A1527 primosomal replication protein N YP_001791860.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 YP_001791861.1 PFAM: Na+/solute symporter; KEGG: mpt:Mpe_A0866 putative membrane transport protein YP_001791862.1 KEGG: eba:ebA828 predicted membrane protein YP_001791863.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_001791864.1 PFAM: protein of unknown function DUF299; KEGG: mpt:Mpe_A1520 hypothetical protein YP_001791865.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mpt:Mpe_A1965 putative tRNA/rRNA methyltransferase protein YP_001791866.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids YP_001791867.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM YP_001791868.1 TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: mpt:Mpe_A1968 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase YP_001791869.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: aav:Aave_1834 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YP_001791870.1 TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD; KEGG: mpt:Mpe_A1969 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_001791871.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: mpt:Mpe_A1970 putative transmembrane protein YP_001791872.1 TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: mpt:Mpe_A1971 putative outer membrane signal peptide protein YP_001791873.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: mpt:Mpe_A1972 hypothetical protein YP_001791874.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_001791875.1 PFAM: phosphatidate cytidylyltransferase; KEGG: mpt:Mpe_A1974 putative phosphatidate cytidylyltransferase membrane protein YP_001791876.1 KEGG: mpt:Mpe_A1975 di-trans-poly-cis-decaprenylcistransferase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_001791877.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_001791878.1 Catalyzes the phosphorylation of UMP to UDP YP_001791879.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_001791880.1 PFAM: ribosomal protein S2; KEGG: mpt:Mpe_A1979 putative 30S ribosomal protein S2 YP_001791881.1 PFAM: Amidase; KEGG: mpt:Mpe_A1980 amidase YP_001791882.1 PFAM: FAD dependent oxidoreductase; KEGG: mpt:Mpe_A1981 D-amino-acid dehydrogenase YP_001791883.1 KEGG: mpt:Mpe_A3449 hypothetical protein YP_001791884.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: mpt:Mpe_A1982 hypothetical protein YP_001791885.1 KEGG: mpt:Mpe_A1983 exoribonuclease II; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; SMART: Cold shock protein YP_001791886.1 PFAM: phosphoribosyltransferase; KEGG: mpt:Mpe_A1984 putative transferase YP_001791887.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis YP_001791888.1 PFAM: tRNA synthetase class II (G H P and S); KEGG: mpt:Mpe_A1986 ATP phosphoribosyltransferase regulatory subunit YP_001791889.1 KEGG: mpt:Mpe_A1987 hypothetical protein YP_001791890.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: mpt:Mpe_A1988 putative serine protease transmembrane protein YP_001791891.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: mpt:Mpe_A1989 hypothetical protein YP_001791892.1 TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: mpt:Mpe_A1990 putative GTP-binding protein YP_001791893.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: mpt:Mpe_A1991 putative host factor-I protein YP_001791894.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_001791895.1 TIGRFAM: outer membrane assembly lipoprotein YfgL; SMART: Pyrrolo-quinoline quinone; KEGG: mpt:Mpe_A1993 hypothetical protein YP_001791896.1 KEGG: mpt:Mpe_A1994 hypothetical protein YP_001791897.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_001791898.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis YP_001791899.1 KEGG: mpt:Mpe_A1997 hypothetical protein YP_001791900.1 KEGG: mpt:Mpe_A1998 uncharacterized protein involved in fimbrial biogenesis; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein YP_001791901.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: mpt:Mpe_A1999 hypothetical protein YP_001791902.1 PFAM: nucleoside diphosphate kinase; KEGG: mpt:Mpe_A2000 nucleoside diphosphate kinase YP_001791903.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mpt:Mpe_A2001 ribosomal large subunit pseudouridine synthase B YP_001791904.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: mpt:Mpe_A2002 putative segregation and condensation protein B YP_001791905.1 KEGG: mpt:Mpe_A2003 putative ribosomal large subunit pseudouridine synthase D protein; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase YP_001791906.1 KEGG: mpt:Mpe_A2004 putative transmembrane protein YP_001791907.1 SMART: helicase c2; DEAD-like helicases; KEGG: mpt:Mpe_A2005 putative ATP-dependent DNA helicase-related protein YP_001791908.1 PFAM: protein of unknown function DUF465; KEGG: mpt:Mpe_A2006 hypothetical protein YP_001791909.1 SMART: protein phosphatase 2C domain protein; KEGG: mpt:Mpe_A2007 hypothetical protein YP_001791910.1 PFAM: AFG1-family ATPase; KEGG: mpt:Mpe_A2009 hypothetical protein YP_001791911.1 E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide YP_001791912.1 PFAM: PspC domain protein; KEGG: sat:SYN_00293 transcriptional regulator-like protein YP_001791913.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: ajs:Ajs_1823 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_001791914.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide YP_001791915.1 KEGG: nmu:Nmul_A2461 hypothetical protein YP_001791916.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: mpt:Mpe_A2099 putative transcription regulator protein YP_001791917.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: mpt:Mpe_A2100 serine-type D-Ala-D-Ala carboxypeptidase YP_001791918.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis YP_001791919.1 KEGG: pol:Bpro_2321 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain YP_001791920.1 TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mpt:Mpe_A2102 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_001791921.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_001791922.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit YP_001791923.1 acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate YP_001791924.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mpt:Mpe_A2106 putative RNA polymerase sigma factor transcription regulator protein YP_001791925.1 KEGG: ajs:Ajs_1767 putative transmembrane protein YP_001791926.1 KEGG: mpt:Mpe_A2108 hypothetical protein YP_001791927.1 PFAM: RDD domain containing protein; KEGG: mpt:Mpe_A2109 hypothetical protein YP_001791928.1 PFAM: diacylglycerol kinase; KEGG: mpt:Mpe_A2110 diacylglycerol kinase YP_001791929.1 PFAM: nitrogen regulatory protein P-II; KEGG: mpt:Mpe_A2112 putative nitrogen regulatory p-II transcription regulator protein YP_001791930.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence YP_001791931.1 KEGG: bbr:BB3086 hypothetical protein YP_001791932.1 KEGG: mpt:Mpe_A1533 hypothetical protein YP_001791933.1 KEGG: mpt:Mpe_A1532 DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_001791934.1 KEGG: har:HEAR3117 putative type 4 fimbrial biogenesis transmembrane protein YP_001791935.1 KEGG: mfa:Mfla_2522 methylation YP_001791936.1 KEGG: dar:Daro_3039 hypothetical protein YP_001791937.1 KEGG: mms:mma_3357 type IV pilus assembly protein PilW YP_001791938.1 KEGG: mms:mma_3356 type IV pilus assembly protein PilX YP_001791939.1 KEGG: mms:mma_3355 type IV fimbrial biogenesis protein PilY1 YP_001791940.1 TIGRFAM: TonB family protein; KEGG: tbd:Tbd_2268 TonB domain protein YP_001791941.1 PFAM: histone deacetylase superfamily; KEGG: mpt:Mpe_A1246 putative histone deacetylase-family protein YP_001791942.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: mpt:Mpe_A1245 putative MoxR like protein YP_001791943.1 PFAM: protein of unknown function DUF58; KEGG: mpt:Mpe_A1244 hypothetical protein YP_001791944.1 PFAM: transglutaminase domain protein; KEGG: mpt:Mpe_A1243 hypothetical protein YP_001791945.1 KEGG: mpt:Mpe_A2925 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_001791946.1 KEGG: reh:H16_A0562 superfamily II DNA/RNA helicase, SNF2 family; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases YP_001791947.1 KEGG: mms:mma_0535 ABC-type multidrug transport system, ATPase and permease components; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase YP_001791948.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: mfa:Mfla_0760 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase YP_001791949.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate YP_001791950.1 PFAM: ChaC family protein; KEGG: mpt:Mpe_A2926 uncharacterized protein involved in cation transport YP_001791951.1 KEGG: mpt:Mpe_A2928 hypothetical protein YP_001791952.1 KEGG: mpt:Mpe_A2931 pyridoxamine-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_001791953.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: rfr:Rfer_2598 peptide methionine sulfoxide reductase YP_001791954.1 PFAM: protein of unknown function DUF218; KEGG: pna:Pnap_1132 protein of unknown function DUF218 YP_001791955.1 TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: mpt:Mpe_A2936 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_001791956.1 PFAM: Lytic transglycosylase catalytic; KEGG: mpt:Mpe_A2937 hypothetical protein YP_001791957.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_001791958.1 PFAM: ATP-cone domain protein; KEGG: mpt:Mpe_A2939 hypothetical protein YP_001791959.1 TIGRFAM: general secretion pathway protein H; KEGG: mpt:Mpe_A2940 fimbrial biogenesis protein YP_001791960.1 KEGG: asa:ASA_0688 type IV pilus assembly protein YP_001791961.1 KEGG: mpt:Mpe_A2942 fimbrial biogenesis protein YP_001791962.1 KEGG: mpt:Mpe_A2943 fimbrial biogenesis protein YP_001791963.1 KEGG: eba:ebA5107 hypothetical protein YP_001791964.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: mpt:Mpe_A2945 bifunctional protein diaminohydroxyphosphoribosylaminopyrimidine deaminase, 5-amino-6-(5-phosphoribosylamino)uracil reductase YP_001791965.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: mpt:Mpe_A2947 putative riboflavin biosynthesis bifunctional protein YP_001791966.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not YP_001791967.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: mpt:Mpe_A2949 putative N utilization substance B (transcriptional antiterminator)(l factor) transcription regulator protein YP_001791968.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aminotransferase class I and II; KEGG: mpt:Mpe_A2950 aminotransferase YP_001791969.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mpt:Mpe_A2951 serine/threonine protein kinase-like protein YP_001791970.1 TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: mpt:Mpe_A2953 putative thioesterase protein YP_001791971.1 TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: mpt:Mpe_A2954 transmembrane protein/biopolymer transport YP_001791972.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mpt:Mpe_A2955 putative TolR-like translocation protein YP_001791973.1 TIGRFAM: TonB family protein; protein TolA; PFAM: Tol-Pal system TolA; KEGG: ajs:Ajs_2773 TonB family protein YP_001791974.1 KEGG: mpt:Mpe_A2511 conserved hypothetical HD-GYP hydrolase domain containing protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_001791975.1 KEGG: mpt:Mpe_A2510 signal transduction protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001791976.1 KEGG: xcb:XC_2829 hypothetical protein YP_001791977.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: mex:Mext_4798 2-alkenal reductase YP_001791979.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: reh:H16_A3687 putative chloramphenicol sensitive permease YP_001791980.1 KEGG: mpt:Mpe_A2215 hypothetical protein YP_001791981.1 PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; KEGG: cch:Cag_1325 nucleic acid-binding protein,contains PIN domain YP_001791982.1 KEGG: eba:ebD16 hypothetical protein YP_001791983.1 KEGG: bfs:BF1531 hypothetical protein YP_001791984.1 PFAM: protein of unknown function DUF262; KEGG: bfs:BF1532 hypothetical protein YP_001791985.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bpt:Bpet0843 hypothetical protein YP_001791986.1 PFAM: CBS domain containing protein; KEGG: tbd:Tbd_0664 hypothetical protein YP_001791987.1 PFAM: Glutathione S-transferase domain; KEGG: azo:azo2267 putative glutathione transferase YP_001791988.1 PFAM: NERD domain protein; KEGG: rso:RS02993 hypothetical protein YP_001791989.1 PFAM: DNA/RNA non-specific endonuclease; KEGG: xcv:XCV3882 putative endonuclease precursor YP_001791990.1 TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB; KEGG: eba:ebD102 hypothetical protein YP_001791991.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: eba:ebD103 putative antitoxin of toxin-antitoxin stability system YP_001791992.1 PFAM: creatinase; peptidase M24; KEGG: mpt:Mpe_A2217 putative peptidase, M24 family protein YP_001791993.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: tbd:Tbd_0660 chemotaxis sensory transducer YP_001791994.1 KEGG: mpt:Mpe_A2083 hypothetical protein YP_001791995.1 KEGG: mpt:Mpe_A2113 NAD(+) synthase (glutamine-hydrolyzing); TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD synthase YP_001791996.1 PFAM: protein of unknown function DUF482; KEGG: mpt:Mpe_A2114 hypothetical protein YP_001791997.1 KEGG: dac:Daci_0558 hypothetical protein YP_001791998.1 PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: ppf:Pput_3498 ABC transporter domain protein YP_001791999.1 PFAM: Inorganic pyrophosphatase; KEGG: mpt:Mpe_A2120 inorganic diphosphatase YP_001792000.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient YP_001792001.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: aav:Aave_2488 polyhydroxyalkanoate depolymerase, intracellular YP_001792002.1 TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: mpt:Mpe_A2296 putative electron transport-related protein YP_001792003.1 KEGG: pol:Bpro_1716 hypothetical protein YP_001792004.1 PFAM: integrase family protein; KEGG: bam:Bamb_0912 phage integrase family protein YP_001792005.1 PFAM: Prophage CP4-57 regulatory YP_001792010.1 KEGG: pna:Pnap_0964 hypothetical protein YP_001792011.1 KEGG: pna:Pnap_0963 hypothetical protein YP_001792012.1 KEGG: dac:Daci_4688 hypothetical protein YP_001792015.1 PFAM: peptidase U35 phage prohead HK97; KEGG: rsq:Rsph17025_2821 peptidase U35, phage prohead HK97 YP_001792017.1 KEGG: rfr:Rfer_0046 cytochrome c family protein, putative YP_001792018.1 KEGG: bba:Bd3194 hypothetical protein YP_001792019.1 KEGG: ajs:Ajs_2860 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_001792020.1 PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: mpt:Mpe_A2516 vinylacetyl-CoA delta-isomerase YP_001792021.1 PFAM: isochorismatase hydrolase; KEGG: mpt:Mpe_A2514 hypothetical protein YP_001792022.1 PFAM: protein of unknown function RIO1; KEGG: mpt:Mpe_A1034 RIO-type serine/threonine protein kinase YP_001792023.1 PFAM: helicase domain protein; SMART: DEAD-like helicases; KEGG: gox:GOX1762 putative RNA helicase YP_001792024.1 PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bxe:Bxe_A4436 ATP-dependent RNA helicase DbpA YP_001792025.1 KEGG: xac:XAC2202 hemolysin secretion protein B; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase YP_001792026.1 KEGG: aav:Aave_4358 transposition helper protein YP_001792027.1 PFAM: Integrase catalytic region; KEGG: bpt:Bpet3733 putative transposase YP_001792029.1 PFAM: Integrase catalytic region; KEGG: bxe:Bxe_B0052 putative transposase YP_001792030.1 PFAM: Integrase catalytic region; KEGG: bxe:Bxe_B0052 putative transposase YP_001792031.1 PFAM: FAD linked oxidase domain protein; KEGG: rso:RSc1556 probable oxidoreductase protein YP_001792032.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: mpt:Mpe_A3247 conserved hypothetical dioxygenase YP_001792033.1 PFAM: Domain of unknown function DUF1924; KEGG: pna:Pnap_1532 mono-heme class I cytochrome c YP_001792034.1 KEGG: pna:Pnap_1533 diheme cytochrome c YP_001792035.1 PFAM: cytochrome B561; KEGG: bvi:Bcep1808_6299 cytochrome b561 YP_001792036.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rfr:Rfer_0503 two component transcriptional regulator, winged helix family YP_001792037.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rfr:Rfer_0504 periplasmic sensor signal transduction histidine kinase YP_001792038.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: rpa:RPA0955 putative 5'-nucleotidase family protein YP_001792039.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine YP_001792040.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: tbd:Tbd_0950 D-isomer specific 2-hydroxyacid dehydrogenase YP_001792041.1 KEGG: mgm:Mmc1_2535 ABC-type nitrate/sulfonate/bicarbonate transport system protein YP_001792042.1 KEGG: rfr:Rfer_3932 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; PFAM: histidine kinase HAMP region domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001792043.1 KEGG: aav:Aave_0649 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001792044.1 KEGG: aha:AHA_2711 hypothetical protein YP_001792045.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mpt:Mpe_A0770 transcriptional regulator, GntR family YP_001792046.1 PFAM: isochorismatase hydrolase; KEGG: scl:sce4416 putative isochorismatase YP_001792047.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B1372 ABC transporter, duplicated ATPase subunits YP_001792048.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_1705 isochorismatase hydrolase YP_001792049.1 PFAM: inner-membrane translocator; KEGG: mlo:mlr7063 sugar ABC transporter, permease protein YP_001792050.1 PFAM: inner-membrane translocator; KEGG: mpt:Mpe_A0768 ABC transporter permease protein YP_001792051.1 PFAM: basic membrane lipoprotein; KEGG: mpt:Mpe_A0769 bmp family protein YP_001792052.1 KEGG: mpt:Mpe_A0771 hypothetical protein YP_001792053.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_001792056.1 TIGRFAM: allophanate hydrolase; PFAM: Amidase; KEGG: mpt:Mpe_A0773 UreA amidolyase YP_001792057.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: noc:Noc_1881 helix-turn-helix, fis-type YP_001792058.1 KEGG: hch:HCH_04226 hypothetical protein YP_001792059.1 KEGG: mxa:MXAN_4492 hypothetical protein YP_001792060.1 KEGG: mxa:MXAN_4493 hypothetical protein YP_001792061.1 PFAM: tail sheath protein; KEGG: mxa:MXAN_4494 putative phage tail sheath protein YP_001792062.1 TIGRFAM: conserved hypothetical phage tail protein; PFAM: conserved hypothetical protein; KEGG: mxa:MXAN_4495 hypothetical protein YP_001792063.1 KEGG: mxa:MXAN_4496 hypothetical protein YP_001792064.1 TIGRFAM: conserved hypothetical phage tail protein; PFAM: conserved hypothetical protein; KEGG: mxa:MXAN_4497 hypothetical protein YP_001792065.1 KEGG: mxa:MXAN_4498 hypothetical protein YP_001792067.1 KEGG: mxa:MXAN_4500 hypothetical protein YP_001792068.1 PFAM: Rhs element Vgr protein; KEGG: eli:ELI_09320 hypothetical protein YP_001792069.1 KEGG: mxa:MXAN_4502 hypothetical protein YP_001792070.1 PFAM: GPW/gp25 family protein; KEGG: mxa:MXAN_4503 baseplate assembly protein W YP_001792071.1 KEGG: mxa:MXAN_4504 hypothetical protein YP_001792072.1 TIGRFAM: phage tail protein; KEGG: mxa:MXAN_4505 putative phage tail protein YP_001792074.1 KEGG: aga:AgaP_27410 ENSANGP00000031521 YP_001792075.1 KEGG: mxa:MXAN_4506 hypothetical protein YP_001792076.1 KEGG: mxa:MXAN_4507 hypothetical protein YP_001792077.1 KEGG: mxa:MXAN_4508 hypothetical protein YP_001792078.1 KEGG: mxa:MXAN_4509 hypothetical protein YP_001792079.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: mxa:MXAN_4510 ATPase, AAA family YP_001792080.1 PFAM: OmpA/MotB domain protein; KEGG: dsh:Dshi_2548 hypothetical protein YP_001792082.1 KEGG: mpt:Mpe_A2139 hypothetical protein YP_001792083.1 PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: mpt:Mpe_A3732 putative transmembrane protein YP_001792084.1 KEGG: ajs:Ajs_3873 hypothetical protein YP_001792085.1 KEGG: aav:Aave_4489 hypothetical protein YP_001792086.1 PFAM: YiaAB two helix domain protein; KEGG: pol:Bpro_0458 hypothetical protein YP_001792087.1 PFAM: helix-turn-helix domain protein; KEGG: ajs:Ajs_3879 helix-turn-helix domain protein YP_001792088.1 TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: mpt:Mpe_A1385 acetyl-coenzyme A synthetase YP_001792089.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A1384 hypothetical protein YP_001792090.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: mpt:Mpe_A1382 putative fumarate hydratase YP_001792091.1 PFAM: MscS Mechanosensitive ion channel; KEGG: pol:Bpro_3144 MscS mechanosensitive ion channel YP_001792092.1 PFAM: pseudouridine synthase; KEGG: pna:Pnap_1276 pseudouridine synthase YP_001792093.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: tbd:Tbd_0099 NAD-dependent epimerase/dehydratase YP_001792094.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: dar:Daro_2440 UDP-glucose/GDP-mannose dehydrogenase:6-phosphogluconate dehydrogenase, NAD-binding YP_001792095.1 KEGG: rpb:RPB_3755 hypothetical protein YP_001792096.1 KEGG: acr:Acry_1801 protein involved in cellulose biosynthesis (CelD)-like protein YP_001792097.1 PFAM: acyltransferase 3; KEGG: rpb:RPB_0504 acyltransferase 3 YP_001792098.1 PFAM: polysaccharide biosynthesis protein; KEGG: ppd:Ppro_2862 polysaccharide biosynthesis protein YP_001792099.1 PFAM: polysaccharide deacetylase; KEGG: mav:MAV_1144 polysaccharide deacetylase domain protein YP_001792100.1 PFAM: glycosyl transferase family 2; KEGG: scl:sce0862 glycosyltransferase YP_001792101.1 PFAM: polysaccharide deacetylase; KEGG: gme:Gmet_2023 polysaccharide deacetylase YP_001792102.1 PFAM: O-antigen polymerase; KEGG: cau:Caur_3256 O-antigen polymerase YP_001792103.1 PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_3580 O-antigen polymerase YP_001792104.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: eba:ebA1639 predicted nucleoside-diphosphate-sugar epimerase YP_001792105.1 PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_3097 glycosyl transferase group 1 YP_001792106.1 KEGG: sgl:SG2199 hypothetical protein YP_001792109.1 PFAM: glycosyl transferase group 1; KEGG: scl:sce8918 glycosyltransferase YP_001792110.1 PFAM: glycosyl transferase group 1; KEGG: acr:Acry_0205 glycosyl transferase, group 1 YP_001792111.1 PFAM: protein of unknown function DUF218; KEGG: scl:sce0863 hypothetical protein YP_001792114.1 PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: mpt:Mpe_A1113 putative two-component system, regulatory protein YP_001792115.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; KEGG: rfr:Rfer_1711 histidine kinase internal protein YP_001792116.1 catalyzes the formation of arginine from (N-L-arginino)succinate YP_001792117.1 KEGG: dar:Daro_0889 hypothetical protein YP_001792118.1 PFAM: Fimbrial assembly family protein; KEGG: dar:Daro_0890 hypothetical protein YP_001792119.1 KEGG: pca:Pcar_0383 MshA biogenesis protein, MshJ-like YP_001792121.1 TIGRFAM: pilus (MSHA type) biogenesis protein MshL; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: dar:Daro_0893 type II and III secretion system protein:secretin, N-terminal:secretin/TonB, short N-terminal YP_001792122.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: dar:Daro_0879 type II secretion system protein E:general secretory system II, protein E, N-terminal YP_001792123.1 PFAM: type II secretion system protein; KEGG: dar:Daro_0880 type II secretion system protein YP_001792125.1 KEGG: rfr:Rfer_3363 methylation YP_001792126.1 KEGG: spc:Sputcn32_0573 MSHA biogenesis protein MshQ YP_001792127.1 KEGG: dar:Daro_0884 prokaryotic N-terminal methylation site YP_001792128.1 KEGG: rfr:Rfer_3340 hypothetical protein YP_001792129.1 KEGG: rfr:Rfer_3339 methylation YP_001792130.1 KEGG: dar:Daro_0887 MSHA biogenesis protein MshP YP_001792131.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: mpt:Mpe_A3393 putative methanol dehydrogenase protein, large subunit YP_001792132.1 KEGG: mpt:Mpe_A3394 hypothetical protein YP_001792133.1 SMART: extracellular solute-binding protein family 3; KEGG: mpt:Mpe_A3395 MxaJ protein YP_001792134.1 KEGG: mpt:Mpe_A3397 hypothetical protein YP_001792135.1 KEGG: mpt:Mpe_A3398 hypothetical protein YP_001792136.1 PFAM: Sulphur oxidation protein SoxZ; KEGG: mpt:Mpe_A2085 hypothetical protein YP_001792137.1 KEGG: bxe:Bxe_B2422 hypothetical protein YP_001792138.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mpt:Mpe_A3013 hypothetical protein YP_001792139.1 KEGG: mpt:Mpe_A3014 MxaD protein YP_001792140.1 KEGG: mpt:Mpe_A2189 hypothetical protein YP_001792141.1 KEGG: mpt:Mpe_A2188 hypothetical protein YP_001792142.1 KEGG: mpt:Mpe_A2187 hypothetical protein YP_001792143.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: mpt:Mpe_A1582 ACR3 permease YP_001792144.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bmu:Bmul_6164 protein tyrosine phosphatase YP_001792145.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_0488 glyoxalase/bleomycin resistance protein/dioxygenase YP_001792146.1 PFAM: regulatory protein ArsR; KEGG: mpt:Mpe_A1584 TC repressor YP_001792148.1 PFAM: transposase IS4 family protein; KEGG: eba:ebA3243 transposase, IS5 family YP_001792150.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: hch:HCH_03030 predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase YP_001792151.1 KEGG: reu:Reut_C6417 hypothetical protein YP_001792152.1 KEGG: pol:Bpro_5572 transposase IS116/IS110/IS902 YP_001792153.1 KEGG: fre:Franean1_2180 response regulator receiver protein YP_001792154.1 PFAM: transposase IS3/IS911 family protein; KEGG: aeh:Mlg_2336 hypothetical protein YP_001792155.1 PFAM: Integrase catalytic region; KEGG: sbl:Sbal_4350 integrase, catalytic region YP_001792156.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; KEGG: mpt:Mpe_A2629 putative hydrolase protein YP_001792157.1 TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: mpt:Mpe_A2627 putative formaldehyde-activating enzyme YP_001792158.1 KEGG: mpt:Mpe_A2626 formylmethanofuran dehydrogenase; TIGRFAM: formylmethanofuran dehydrogenase subunit C; PFAM: glutamate synthase alpha subunit domain protein YP_001792159.1 catalyzes the transfer of a formyl group from formylmethanofuran to tetrahydromethanopterin tetrahydromethanopterin YP_001792160.1 TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase 3; KEGG: mpt:Mpe_A2624 formylmethanofurane dehydrogenase, A subunit, putative YP_001792161.1 KEGG: mpt:Mpe_A2623 formylmethanofuran dehydrogenase YP_001792162.1 PFAM: histidine biosynthesis protein; KEGG: mpt:Mpe_A2622 HisA/HisF family protein, putative YP_001792163.1 PFAM: protein of unknown function DUF201; KEGG: mpt:Mpe_A2621 hypothetical protein YP_001792164.1 TIGRFAM: H4MPT-linked C1 transfer pathway protein; KEGG: mpt:Mpe_A2620 S-layer protein, putative YP_001792165.1 PFAM: aspartate/glutamate/uridylate kinase; KEGG: mpt:Mpe_A2619 uncharacterized kinase YP_001792166.1 KEGG: mpt:Mpe_A2618 hypothetical protein YP_001792167.1 KEGG: mpt:Mpe_A2617 hypothetical protein YP_001792168.1 PFAM: dihydropteroate synthase DHPS; KEGG: mpt:Mpe_A2616 pterin-binding domain protein YP_001792169.1 KEGG: mpt:Mpe_A2615 DNA/pantothenate metabolism flavolike protein YP_001792170.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mpt:Mpe_A2614 putative transcriptional regulator YP_001792171.1 PFAM: dihydroneopterin aldolase; KEGG: mpt:Mpe_A2613 dihydroneopterin aldolase-like protein YP_001792172.1 TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: mpt:Mpe_A2612 formaldehyde-activating enzyme YP_001792173.1 PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: mpt:Mpe_A2611 ATP:dephospho-CoA triphosphoribosyl transferase YP_001792174.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: mpt:Mpe_A2610 ribosomal protein S6 modification protein, putative YP_001792175.1 catalyzes the reversible formation of methenyl-H(4)methanopterin from N(5)-formyl-H(4)methanopterin YP_001792176.1 PFAM: protein of unknown function DUF201; KEGG: mpt:Mpe_A2608 hypothetical protein YP_001792177.1 PFAM: Methylene-tetrahydromethanopterin dehydrogenase; KEGG: mpt:Mpe_A2607 methylene tetrahydromethanopterin dehydrogenase/methylenetetrahydrofolate dehydrogenase, putative YP_001792178.1 TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinase; KEGG: mpt:Mpe_A2606 kinase, GHMP family, putative YP_001792179.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mms:mma_2445 phosphinothricin N-acetyltransferase YP_001792180.1 PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mpt:Mpe_A1094 ATPase, AAA family protein YP_001792181.1 KEGG: mpt:Mpe_A1093 hypothetical protein YP_001792182.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpt:Mpe_A1092 putative amino-acid acetyltransferase YP_001792183.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: slo:Shew_0490 peptidase S9, prolyl oligopeptidase active site domain protein YP_001792184.1 KEGG: pna:Pnap_0127 poly (3-hydroxybutyrate) depolymerase YP_001792185.1 KEGG: mpt:Mpe_A1091 hypothetical protein YP_001792186.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: mpt:Mpe_A1090 hypothetical protein YP_001792187.1 PFAM: protein of unknown function DUF490; KEGG: mpt:Mpe_A1089 hypothetical protein YP_001792188.1 PFAM: integrase family protein; KEGG: mpt:Mpe_A1087 prophage CP4-like integrase YP_001792190.1 PFAM: transposase IS3/IS911 family protein; KEGG: pol:Bpro_4705 hypothetical protein YP_001792191.1 PFAM: Integrase catalytic region; KEGG: pol:Bpro_4706 integrase, catalytic region YP_001792192.1 TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: asu:Asuc_1243 phage protein, HK97 GP10 family YP_001792194.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: rme:Rmet_6187 resolvase-like protein YP_001792195.1 KEGG: eba:ebB86 RelE-like cytotoxic translational repressor of toxin-antitoxin stability system YP_001792196.1 PFAM: helix-turn-helix domain protein; KEGG: vei:Veis_0468 helix-turn-helix domain protein YP_001792197.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; KEGG: ajs:Ajs_3104 diguanylate cyclase with PAS/PAC sensor YP_001792198.1 PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: dar:Daro_2754 PAS YP_001792199.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_0722 transcriptional regulator, LysR family YP_001792200.1 KEGG: rfr:Rfer_0845 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_001792201.1 PFAM: MOFRL domain protein; KEGG: azo:azo1162 probable hydroxypyruvate reductase YP_001792202.1 PFAM: conserved hypothetical protein; KEGG: pna:Pnap_1017 uncharacterized protein UPF0065 YP_001792203.1 PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: eba:ebA3490 hypothetical protein YP_001792204.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mms:mma_2584 methyl-accepting chemotaxis protein YP_001792205.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll6662 ribitol 2-dehydrogenase YP_001792206.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: vei:Veis_3165 helix-turn-helix-domain containing protein, AraC type YP_001792207.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: mpt:Mpe_A1486 hypothetical protein YP_001792208.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: rfr:Rfer_1231 hypothetical protein YP_001792209.1 KEGG: rfr:Rfer_1231 hypothetical protein YP_001792210.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: eba:ebD78 hypothetical protein YP_001792211.1 KEGG: mxa:MXAN_4939 hypothetical protein YP_001792212.1 KEGG: mxa:MXAN_4941 hypothetical protein YP_001792213.1 KEGG: reh:H16_A1654 hypothetical membrane spanning protein YP_001792214.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: reh:H16_A1655 choline dehydrogenase YP_001792215.1 KEGG: rfr:Rfer_1230 hypothetical protein YP_001792216.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mpt:Mpe_A3527 oxidoreductase YP_001792217.1 PFAM: alpha/beta hydrolase fold; KEGG: mpt:Mpe_A3619 putative hydrolase YP_001792218.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: xom:XOO_3074 phosphodiesterase YP_001792219.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: mac:MA2988 phosphoribosylanthranilate isomerase YP_001792220.1 positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose YP_001792221.1 PFAM: inner-membrane translocator; KEGG: aav:Aave_2252 inner-membrane translocator YP_001792222.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_2253 ABC transporter-related protein YP_001792223.1 KEGG: aav:Aave_2254 sugar ABC transporter, periplasmic sugar-binding protein YP_001792224.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate YP_001792225.1 PFAM: class II aldolase/adducin family protein; KEGG: cko:CKO_03636 hypothetical protein YP_001792226.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism YP_001792227.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: gur:Gura_0276 helix-turn-helix-domain containing protein, AraC type YP_001792228.1 PFAM: protein of unknown function DUF1037; KEGG: smd:Smed_3808 protein of unknown function DUF1037 YP_001792229.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bha:BH2165 hypothetical protein YP_001792230.1 PFAM: major facilitator superfamily MFS_1; KEGG: rfr:Rfer_0434 major facilitator superfamily MFS_1 YP_001792231.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_3475 ABC transporter related YP_001792232.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3474 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine YP_001792233.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3473 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine YP_001792234.1 PFAM: extracellular solute-binding protein family 3; KEGG: pol:Bpro_3472 extracellular solute-binding protein, family 3 YP_001792235.1 KEGG: rfr:Rfer_2239 coenzyme F390 synthetase-like YP_001792236.1 PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: eba:ebA5073 putative poly-beta-hydroxyalkanoate synthase YP_001792237.1 PFAM: 5'-Nucleotidase domain protein; KEGG: sde:Sde_0580 alkaline phosphatase YP_001792238.1 KEGG: maq:Maqu_3484 hypothetical protein YP_001792239.1 PFAM: chemotaxis sensory transducer; KEGG: rfr:Rfer_3609 methyl-accepting chemotaxis sensory transducer YP_001792240.1 PFAM: glycoside hydrolase family 31; KEGG: rso:RSc1081 probable glucosidase protein YP_001792241.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: C4-dicarboxylate anaerobic carrier; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: mmw:Mmwyl1_2782 TRAP dicarboxylate transporter, DctM subunit YP_001792242.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sit:TM1040_3869 tripartite ATP-independent periplasmic transporter, DctQ component YP_001792243.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: vvy:VVA1590 TRAP-type C4-dicarboxylate transport system, periplasmic component YP_001792244.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane YP_001792245.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: reh:H16_A2504 transcriptional regulator, DeoR-family YP_001792246.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: rfr:Rfer_3678 glycerol kinase YP_001792247.1 PFAM: sodium/hydrogen exchanger; KEGG: bxe:Bxe_A0001 hypothetical protein YP_001792248.1 ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity YP_001792249.1 PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: azo:azo2275 putative glutamine amidotransferase YP_001792250.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: bpm:BURPS1710b_A1187 LacI family regulatory protein YP_001792251.1 PFAM: FAD dependent oxidoreductase; tryptophan halogenase; KEGG: nar:Saro_1882 tryptophan halogenase YP_001792252.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccr:CC_1136 TonB-dependent receptor YP_001792253.1 PFAM: sodium/hydrogen exchanger; KEGG: dar:Daro_4191 sodium/hydrogen exchanger YP_001792254.1 KEGG: bxe:Bxe_A2996 hypothetical protein YP_001792255.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bur:Bcep18194_A5005 biopolymer transport protein ExbD/TolR YP_001792256.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mpt:Mpe_A1756 biopolymer transport ExbD protein YP_001792257.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mpt:Mpe_A1755 biopolymer transport ExbB protein YP_001792258.1 TIGRFAM: TonB family protein; KEGG: azo:azo2329 periplasmic biopolymer transport protein linking inner and outer membranes YP_001792259.1 KEGG: mpt:Mpe_B0598 hypothetical protein YP_001792260.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: pna:Pnap_0226 periplasmic binding protein/LacI transcriptional regulator YP_001792261.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpl:BURPS1106A_A2822 transcriptional regulator, LacI family YP_001792262.1 PFAM: glycoside hydrolase family 4; KEGG: rca:Rcas_1884 glycoside hydrolase family 4 YP_001792263.1 PFAM: extracellular solute-binding protein family 1; KEGG: aau:AAur_3361 putative extracellular sugar-binding protein YP_001792264.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO0272 putative binding-protein-dependent transport protein YP_001792265.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO0271 putative binding-protein-dependent transport protein YP_001792266.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_2027 periplasmic binding protein/LacI transcriptional regulator YP_001792267.1 PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; KEGG: bpm:BURPS1710b_A1185 maltose/maltodextrin import ATP-binding protein MalK YP_001792268.1 PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; KEGG: bam:Bamb_4931 beta-galactosidase YP_001792269.1 PFAM: glycoside hydrolase clan GH-D; KEGG: bpl:BURPS1106A_A2815 alpha-galactosidase YP_001792270.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: asa:ASA_2390 UDP-glucose 4-epimerase YP_001792271.1 KEGG: asa:ASA_2391 galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein YP_001792272.1 TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: aha:AHA_4105 galactokinase YP_001792273.1 PFAM: aldo/keto reductase; KEGG: esa:ESA_00850 hypothetical protein YP_001792274.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dar:Daro_1671 ABC transporter related YP_001792275.1 PFAM: protein of unknown function DUF214; KEGG: dar:Daro_1672 protein of unknown function DUF214 YP_001792276.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pna:Pnap_2837 efflux transporter, RND family, MFP subunit YP_001792277.1 PFAM: regulatory protein TetR; KEGG: rfr:Rfer_3622 transcriptional regulator, TetR family YP_001792278.1 TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pna:Pnap_1230 alcohol dehydrogenase, zinc-binding domain protein YP_001792279.1 KEGG: ajs:Ajs_2801 carboxylesterase; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase YP_001792280.1 PFAM: Chloride channel core; KEGG: mpt:Mpe_A0110 voltage gated chloride channel family protein YP_001792281.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mpt:Mpe_A3640 glycolate oxidase iron-sulfur subunit YP_001792282.1 PFAM: FAD linked oxidase domain protein; KEGG: mpt:Mpe_A3639 FAD linked oxidase YP_001792283.1 PFAM: FAD linked oxidase domain protein; KEGG: ajs:Ajs_0425 FAD linked oxidase domain protein YP_001792284.1 PFAM: domain of unknown function DUF1745; KEGG: mpt:Mpe_A3636 hypothetical protein YP_001792285.1 KEGG: mpt:Mpe_A3635 hypothetical protein YP_001792286.1 PFAM: GumN family protein; KEGG: aav:Aave_0743 GumN family protein YP_001792287.1 KEGG: mpt:Mpe_A3633 hypothetical protein YP_001792288.1 KEGG: pna:Pnap_0301 hypothetical protein YP_001792289.1 KEGG: mpt:Mpe_A3630 hypothetical protein YP_001792290.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: mpt:Mpe_A0165 putative ATPase protein YP_001792291.1 PFAM: homocysteine S-methyltransferase; KEGG: mpt:Mpe_A0166 5-methyltetrahydrofolate--homocysteine S-methyltransferase YP_001792292.1 KEGG: mpt:Mpe_A0167 outer membrane protein YP_001792293.1 KEGG: mpt:Mpe_A0168 5-methyltetrahydrofolate--homocysteine S-methyltransferase; TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein YP_001792294.1 PFAM: protein of unknown function DUF940 membrane lipoprotein putative; KEGG: bps:BPSS0415 lipoprotein YP_001792295.1 KEGG: bpd:BURPS668_A0656 putative lipoprotein YP_001792296.1 KEGG: sfv:SFV_0996 hypothetical protein YP_001792297.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis YP_001792298.1 TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; KEGG: mpt:Mpe_A0513 hypothetical protein YP_001792299.1 involved in the peptidyltransferase reaction during translation YP_001792300.1 PFAM: ribosomal protein L21; KEGG: mpt:Mpe_A0511 putative 50S ribosomal protein L21 YP_001792301.1 PFAM: Polyprenyl synthetase; KEGG: mpt:Mpe_A0510 dimethylallyltransferase YP_001792302.1 PFAM: acylphosphatase; KEGG: dar:Daro_1185 acylphosphatase YP_001792303.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ajs:Ajs_4153 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001792305.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: bte:BTH_I2641 myo-inositol dehydrogenase YP_001792306.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bxe:Bxe_A1331 myo-inositol 2-dehydrogenase YP_001792307.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rso:RSc1245 putative protein implicated in myo-inositol catabolique pathway YP_001792308.1 PFAM: regulatory protein LacI; KEGG: bmu:Bmul_0614 transcriptional regulator, LacI family YP_001792309.1 KEGG: sco:SCO3372 large ATP-binding protein YP_001792310.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bam:Bamb_1311 transcriptional regulator, RpiR family YP_001792311.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bur:Bcep18194_A6008 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001792312.1 PFAM: Ketopantoate hydroxymethyltransferase; KEGG: smd:Smed_5004 ketopantoate hydroxymethyltransferase YP_001792313.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine YP_001792314.1 KEGG: bur:Bcep18194_A6012 hypothetical protein YP_001792315.1 PFAM: Integral membrane protein TerC; KEGG: ilo:IL1429 hypothetical protein YP_001792316.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rfr:Rfer_1665 ATPase, E1-E2 type YP_001792317.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: scl:sce3322 put. D-ribose-binding periplasmic protein YP_001792318.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; KEGG: rfr:Rfer_1021 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) YP_001792319.1 PFAM: pseudouridine synthase; KEGG: ajs:Ajs_2505 pseudouridine synthase YP_001792320.1 KEGG: cau:Caur_2727 glycosyl hydrolase family 32 domain protein; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32 YP_001792321.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: mmw:Mmwyl1_0233 regulatory protein LacI YP_001792322.1 PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_pAT_379 putative sugar transport sugar binding protein YP_001792323.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_pAT_377 ABC transporter sugar permease YP_001792324.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_0230 binding-protein-dependent transport systems inner membrane component YP_001792325.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rle:pRL100256 putative ATP-binding component of ABC transporter YP_001792326.1 TIGRFAM: Rieske [2Fe-2S] domain protein, MocE subfamily; PFAM: Rieske [2Fe-2S] domain protein; KEGG: bch:Bcen2424_2681 Rieske (2Fe-2S) domain protein, MocE subfamily YP_001792327.1 PFAM: fatty acid desaturase; KEGG: bmu:Bmul_0615 fatty acid desaturase YP_001792328.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: hch:HCH_01170 ABC-type sugar transport system, periplasmic component YP_001792330.1 KEGG: pna:Pnap_4904 hypothetical protein YP_001792331.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmu:Bmul_5797 transcriptional regulator, LysR family YP_001792332.1 KEGG: mpt:Mpe_A1928 hypothetical protein YP_001792333.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rle:pRL120541 putative transmembrane GGDEF/EAL domain protein YP_001792334.1 PFAM: inner-membrane translocator; KEGG: bmu:Bmul_1889 monosaccharide-transporting ATPase YP_001792335.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmu:Bmul_1890 ABC transporter related YP_001792336.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rso:RSc1241 putative rhizopine-binding precursor signal peptide protein YP_001792337.1 PFAM: PfkB domain protein; KEGG: bmu:Bmul_1892 PfkB domain protein YP_001792338.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bur:Bcep18194_A4566 acetolactate synthase YP_001792339.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bur:Bcep18194_A4565 xylose isomerase-like TIM barrel YP_001792340.1 PFAM: Myo-inositol catabolism IolB domain protein; KEGG: bam:Bamb_1300 myo-inositol catabolism IolB domain protein YP_001792341.1 KEGG: pna:Pnap_0225 hypothetical protein YP_001792342.1 PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; KEGG: esa:ESA_01983 hypothetical protein YP_001792343.1 PFAM: phosphorylase kinase alphabeta; KEGG: amr:AM1_2391 phosphorylase kinase alpha YP_001792344.1 KEGG: pna:Pnap_1104 1,4-alpha-glucan branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain YP_001792345.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: art:Arth_2030 alpha amylase, catalytic region YP_001792346.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: btl:BALH_3635 oligo-1,6-glucosidase YP_001792347.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: vei:Veis_0947 ABC transporter related YP_001792348.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mlo:mll5109 alpha-glucosidase YP_001792349.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: csa:Csal_0261 alpha amylase YP_001792350.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_0023 binding-protein-dependent transport systems inner membrane component YP_001792351.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csa:Csal_0259 binding-protein-dependent transport systems inner membrane component YP_001792352.1 PFAM: extracellular solute-binding protein family 1; KEGG: hch:HCH_00201 ABC-type sugar transport system, periplasmic component YP_001792353.1 glucokinase catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate YP_001792354.1 PFAM: Aldose 1-epimerase; KEGG: eca:ECA1388 aldose 1-epimerase YP_001792355.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: mpt:Mpe_A3524 putative transmembrane aldehyde dehydrogenase oxidoreductase protein YP_001792356.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_1395 transcriptional regulator, LysR family YP_001792357.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dac:Daci_4337 short-chain dehydrogenase/reductase SDR YP_001792358.1 PFAM: peptidase M48 Ste24p; KEGG: dar:Daro_0246 peptidase M48, Ste24p YP_001792359.1 KEGG: dar:Daro_2990 hypothetical protein YP_001792360.1 PFAM: protein of unknown function DUF124; KEGG: mpt:Mpe_A2218 hypothetical protein YP_001792361.1 PFAM: UspA domain protein; KEGG: mpt:Mpe_A2637 hypothetical protein YP_001792362.1 TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: ajs:Ajs_0227 4-oxalocrotonate tautomerase family enzyme YP_001792363.1 catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate YP_001792364.1 catalyzes the formation of acetyl-CoA from acetalaldehyde YP_001792365.1 KEGG: mpt:Mpe_A2272 4-oxalocrotonate decarboxylase; TIGRFAM: 4-oxalocrotonate decarboxylase; PFAM: Hydratase/decarboxylase YP_001792366.1 KEGG: reu:Reut_B5691 4-oxalocrotonate decarboxylase; TIGRFAM: 2-oxopent-4-enoate hydratase; PFAM: Hydratase/decarboxylase YP_001792367.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: vei:Veis_2786 alpha/beta hydrolase fold YP_001792368.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A2279 LysR family transcriptional regulatory protein YP_001792369.1 PFAM: Extracellular ligand-binding receptor; KEGG: har:HEAR0738 putative amino acid ABC transporter YP_001792370.1 PFAM: Integral membrane protein TerC; KEGG: pen:PSEEN3035 hypothetical protein YP_001792371.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A1718 putative LysR-family transcriptional regulator YP_001792372.1 KEGG: mpt:Mpe_A1719 hypothetical protein YP_001792373.1 KEGG: mpt:Mpe_A1725 hypothetical protein YP_001792374.1 PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: rfr:Rfer_0377 putative membrane anion transport protein YP_001792375.1 TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; KEGG: vei:Veis_3009 nucleotidyltransferase substrate binding protein, HI0074 family YP_001792376.1 PFAM: DNA polymerase beta domain protein region; KEGG: xom:XOO_3260 hypothetical protein YP_001792377.1 TIGRFAM: 2-hydroxymuconic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: reu:Reut_B5689 betaine-aldehyde dehydrogenase YP_001792378.1 PFAM: protein of unknown function DUF336; KEGG: ajs:Ajs_0219 protein of unknown function DUF336 YP_001792379.1 TIGRFAM: catechol 2,3 dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vei:Veis_2789 catechol 2,3-dioxygenase YP_001792380.1 PFAM: ferredoxin; KEGG: vei:Veis_2790 ferredoxin YP_001792381.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: vei:Veis_2791 oxidoreductase FAD/NAD(P)-binding domain protein YP_001792382.1 PFAM: Phenol hydroxylase conserved region; KEGG: vei:Veis_2792 phenol hydroxylase conserved region YP_001792383.1 PFAM: methane/phenol/toluene hydroxylase; YHS domain protein; KEGG: vei:Veis_2793 methane/phenol/toluene hydroxylase YP_001792384.1 PFAM: monooxygenase component MmoB/DmpM; KEGG: vei:Veis_2794 monooxygenase component MmoB/DmpM YP_001792385.1 PFAM: methane/phenol/toluene hydroxylase; KEGG: vei:Veis_2795 methane/phenol/toluene hydroxylase YP_001792386.1 PFAM: Phenol hydroxylase subunit; KEGG: vei:Veis_2796 phenol hydroxylase subunit YP_001792387.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; 4-vinyl reductase 4VR; Activator of aromatic catabolism; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ajs:Ajs_0205 sigma54 specific transcriptional regulator, fis family YP_001792388.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ajs:Ajs_0204 transcriptional regulator, GntR family YP_001792389.1 KEGG: dar:Daro_1441 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein YP_001792390.1 PFAM: Rhodanese domain protein; KEGG: mpt:Mpe_A2636 3-mercaptopyruvate sulfurtransferase YP_001792391.1 KEGG: mpt:Mpe_A2635 putative transmembrane protein YP_001792392.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: aav:Aave_1298 glycerophosphoryl diester phosphodiesterase YP_001792393.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: aav:Aave_2012 Rieske (2Fe-2S) domain protein YP_001792394.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: mpt:Mpe_A2633 putative exodeoxyribonuclease small subunit protein YP_001792395.1 PFAM: Polyprenyl synthetase; KEGG: mpt:Mpe_A2632 geranyltranstransferase YP_001792396.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: mpt:Mpe_A2631 putative 1-deoxyxylulose-5-phosphate synthase protein YP_001792397.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: tbd:Tbd_1431 putative heat shock protein, DnaJ family YP_001792398.1 PFAM: heat shock protein Hsp20; KEGG: eba:ebA2730 heat shock protein, HSP20 family YP_001792399.1 PFAM: heat shock protein Hsp20; KEGG: eba:ebB88 putative heat shock protein YP_001792400.1 PFAM: cytochrome c class I; KEGG: psa:PST_0367 hypothetical protein YP_001792401.1 KEGG: mes:Meso_1588 putative glucose/sorbosone dehydrogenase YP_001792402.1 PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bbt:BBta_3626 putative sigma-54-dependent transcriptional regulator, HTH fis-type family YP_001792403.1 KEGG: mpt:Mpe_A3087 putative zinc protease protein YP_001792404.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mpt:Mpe_A3090 conserved hypothetical oxidoreductase protein YP_001792405.1 KEGG: mpt:Mpe_A3092 hippurate hydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001792406.1 PFAM: ThiJ/PfpI domain protein; KEGG: aav:Aave_1967 ThiJ/PfpI domain protein YP_001792407.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mpt:Mpe_A3093 hypothetical protein YP_001792408.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family YP_001792409.1 KEGG: vei:Veis_1779 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase YP_001792410.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_001792411.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: vei:Veis_1778 transcriptional regulator, RpiR family YP_001792412.1 KEGG: rfr:Rfer_2940 sulfate transporter/antisigma-factor antagonist STAS YP_001792413.1 PFAM: toluene tolerance family protein; KEGG: pol:Bpro_0797 toluene tolerance YP_001792414.1 PFAM: VacJ family lipoprotein; KEGG: mpt:Mpe_A3098 putative lipoprotein YP_001792415.1 PFAM: Mammalian cell entry related domain protein; KEGG: pol:Bpro_0795 mammalian cell entry related YP_001792416.1 PFAM: protein of unknown function DUF140; KEGG: mpt:Mpe_A3100 hypothetical protein YP_001792417.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A3101 putative ABC transporter ATP-binding subunit YP_001792418.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate YP_001792419.1 PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: mpt:Mpe_A3103 glutamate synthase (ferredoxin) YP_001792420.1 PFAM: protein of unknown function DUF1568; KEGG: aav:Aave_1007 protein of unknown function DUF1568 YP_001792421.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mpt:Mpe_A0450 cysteine synthase YP_001792422.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate YP_001792423.1 PFAM: 3-dehydroquinate synthase; KEGG: pna:Pnap_0679 3-dehydroquinate synthase YP_001792424.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis YP_001792425.1 KEGG: dac:Daci_5576 hypothetical protein YP_001792426.1 TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: mpt:Mpe_A3109 fimbrial biogenesis protein YP_001792427.1 PFAM: Pilus assembly protein PilP; KEGG: mpt:Mpe_A3110 fimbrial assembly protein YP_001792428.1 PFAM: Pilus assembly protein PilO; KEGG: mpt:Mpe_A3111 fimbrial assembly protein YP_001792429.1 PFAM: Fimbrial assembly family protein; KEGG: mpt:Mpe_A3112 fimbrial assembly protein YP_001792430.1 TIGRFAM: type IV pilus assembly protein PilM; KEGG: mpt:Mpe_A3113 fimbrial assembly protein YP_001792431.1 KEGG: mpt:Mpe_A3114 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_001792432.1 TIGRFAM: iron donor protein CyaY; PFAM: Frataxin family protein; KEGG: mpt:Mpe_A3115 CyaY protein YP_001792433.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mpt:Mpe_A3116 putative diaminopimelate decarboxylase protein YP_001792434.1 KEGG: pol:Bpro_0748 hypothetical protein YP_001792435.1 KEGG: pol:Bpro_0746 outer membrane protein (porin)-like YP_001792436.1 KEGG: mms:mma_0290 outer membrane porin YP_001792437.1 KEGG: pol:Bpro_0745 putative ubiquinone biosynthesis protein YP_001792438.1 PFAM: OsmC family protein; KEGG: mpt:Mpe_A3124 hypothetical protein YP_001792439.1 TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Threonine dehydratase domain protein; Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mpt:Mpe_A3125 threonine dehydratase biosynthetic YP_001792440.1 PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; KEGG: mpt:Mpe_A3126 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_001792441.1 KEGG: mpt:Mpe_A3127 general secretion pathway protein C YP_001792442.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: mpt:Mpe_A3128 general secretion pathway protein G YP_001792443.1 KEGG: mpt:Mpe_A3129 general secretion pathway protein H YP_001792444.1 TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: mpt:Mpe_A3130 general secretion pathway protein I YP_001792445.1 KEGG: mpt:Mpe_A3131 general secretion pathway protein J YP_001792446.1 PFAM: General secretion pathway protein K; KEGG: mpt:Mpe_A3132 general secretion pathway protein K YP_001792447.1 PFAM: General secretion pathway L; KEGG: mpt:Mpe_A3133 general secretion pathway protein L YP_001792448.1 PFAM: General secretion pathway M protein; KEGG: mpt:Mpe_A3134 general secretion pathway protein M YP_001792449.1 KEGG: mpt:Mpe_A3135 general secretion pathway protein N YP_001792450.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: mpt:Mpe_A3136 general secretion pathway protein D YP_001792451.1 KEGG: mpt:Mpe_A3137 pili biogenesis ATPase; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase YP_001792452.1 TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: mpt:Mpe_A3138 general secretory pathway protein F YP_001792453.1 KEGG: pin:Ping_2394 filamentous haemagglutinin family outer membrane protein; TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Ig family protein; filamentous haemagglutinin domain protein; SMART: Dystroglycan-type cadherin domain protein YP_001792454.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: mms:mma_1617 hemolysin activation/secretion signal peptide protein YP_001792455.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mpt:Mpe_A3140 putative ATPase YP_001792456.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: pol:Bpro_0605 transcriptional regulator, Crp/Fnr family YP_001792457.1 PFAM: AMP-dependent synthetase and ligase; KEGG: pna:Pnap_3607 AMP-dependent synthetase and ligase YP_001792458.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_0469 ABC transporter related YP_001792459.1 PFAM: inner-membrane translocator; KEGG: pol:Bpro_0602 inner-membrane translocator YP_001792460.1 PFAM: inner-membrane translocator; KEGG: aav:Aave_0784 inner-membrane translocator YP_001792461.1 KEGG: pna:Pnap_3611 hypothetical protein YP_001792462.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_0599 ABC transporter related YP_001792463.1 KEGG: mpt:Mpe_A3142 hypothetical protein YP_001792464.1 KEGG: ajs:Ajs_0464 putative phenylacetate-CoA ligase YP_001792465.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A3143 hypothetical protein YP_001792466.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mpt:Mpe_A3148 two component response regulator YP_001792467.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A3149 sensor histidine kinase YP_001792468.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) YP_001792469.1 PFAM: peptidase M23B; KEGG: mpt:Mpe_A3151 hypothetical protein YP_001792470.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling YP_001792471.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: aav:Aave_4049 iron-sulfur cluster assembly accessory protein YP_001792472.1 PFAM: protein of unknown function DUF583; KEGG: mpt:Mpe_A3154 hypothetical protein YP_001792473.1 KEGG: mpt:Mpe_A3155 hypothetical protein YP_001792474.1 forms a direct contact with the tRNA during translation YP_001792475.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_001792476.1 PFAM: basic membrane lipoprotein; KEGG: aav:Aave_1135 basic membrane lipoprotein YP_001792477.1 KEGG: mpt:Mpe_A0802 hypothetical protein YP_001792478.1 PFAM: inner-membrane translocator; KEGG: pol:Bpro_1485 inner-membrane translocator YP_001792479.1 PFAM: inner-membrane translocator; KEGG: dac:Daci_2136 inner-membrane translocator YP_001792480.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0803 putative sugar ATP binding ABC transporter protein YP_001792481.1 TIGRFAM: guanine deaminase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: mpt:Mpe_A0801 guanine deaminase YP_001792482.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A0800 putative LysR-family transcriptonal regulator YP_001792483.1 TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: ferredoxin; molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; KEGG: dac:Daci_5910 xanthine dehydrogenase, small subunit YP_001792484.1 KEGG: mpt:Mpe_A0798 xanthine dehydrogenase; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001792485.1 TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: mpt:Mpe_A0797 xanthine dehydrogenase accessory factor YP_001792486.1 KEGG: psb:Psyr_2940 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; MASE1 domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001792487.1 KEGG: tcx:Tcr_1222 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; SMART: PAC repeat-containing protein YP_001792488.1 KEGG: azo:azo1687 hypothetical protein YP_001792489.1 KEGG: rfr:Rfer_3395 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001792490.1 PFAM: integrase family protein; KEGG: bam:Bamb_0912 phage integrase family protein YP_001792492.1 KEGG: eba:ebA798 hypothetical protein YP_001792497.1 KEGG: asa:ASA_P4G122 DNA primase YP_001792498.1 PFAM: protein of unknown function DUF927; KEGG: lpc:LPC_2195 inner membrane protein YP_001792500.1 KEGG: rso:RSc2475 hypothetical protein YP_001792502.1 KEGG: pna:Pnap_1401 hypothetical protein YP_001792503.1 PFAM: porin Gram-negative type; KEGG: slo:Shew_3260 porin, gram-negative type YP_001792504.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: har:HEAR3262 methyl-accepting chemotaxis protein YP_001792505.1 PFAM: CBS domain containing protein; KEGG: rfr:Rfer_1632 CBS domain containing membrane protein YP_001792506.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons YP_001792507.1 catalyzes the phosphorylation of NAD to NADP YP_001792508.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: mpt:Mpe_A3335 putative DNA repair protein YP_001792509.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A3336 hypothetical protein YP_001792510.1 PFAM: peptidase S16 lon domain protein; KEGG: mpt:Mpe_A3337 hypothetical protein YP_001792511.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: mpt:Mpe_A3235 putative A/G-specific adenine glycosylase YP_001792512.1 KEGG: mpt:Mpe_A3234 hypothetical protein YP_001792513.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases YP_001792514.1 PFAM: Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: mpt:Mpe_A3232 hypothetical protein YP_001792515.1 KEGG: mpt:Mpe_A3231 hypothetical protein YP_001792516.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis YP_001792517.1 KEGG: mpt:Mpe_A3229 ribose-phosphate diphosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_001792518.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response YP_001792519.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_001792520.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bxe:Bxe_A4137 ferredoxin YP_001792521.1 KEGG: mpt:Mpe_A3224 pantetheine-phosphate adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_001792522.1 TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein; methyltransferase small; KEGG: mpt:Mpe_A3223 putative methylase YP_001792523.1 KEGG: mpt:Mpe_A3222 putative cell division protein; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_001792524.1 TIGRFAM: secretion ATPase, PEP-CTERM locus subfamily; SMART: AAA ATPase; KEGG: eba:ebA4256 general secretion pathway protein-related protein YP_001792525.1 KEGG: dar:Daro_2400 hypothetical protein YP_001792526.1 KEGG: dar:Daro_2399 probable exopolysaccharide biosynthesis protein YP_001792527.1 TIGRFAM: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily; PFAM: lipopolysaccharide biosynthesis protein; KEGG: eba:ebA4249 polysaccharide chain length determinant protein YP_001792528.1 PFAM: polysaccharide export protein; KEGG: rfr:Rfer_0658 polysaccharide export protein YP_001792529.1 KEGG: azo:azo3193 glycosyltransferase; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_001792531.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mpt:Mpe_A2735 putative ubiquinone/menaquinone biosynthesis methyltransferase protein YP_001792532.1 PFAM: protein of unknown function DUF971; KEGG: mpt:Mpe_A2736 hypothetical protein YP_001792533.1 KEGG: aav:Aave_3858 phosphoglycerate mutase 1 family; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase YP_001792534.1 PFAM: Rhodanese domain protein; KEGG: mpt:Mpe_A0714 putative transmembrane protein YP_001792535.1 TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: mpt:Mpe_A0715 glutaredoxin 3 YP_001792536.1 PFAM: K potassium transporter; KEGG: mpt:Mpe_A0174 potassium uptake protein YP_001792537.1 KEGG: mpt:Mpe_A0241 hypothetical protein YP_001792538.1 PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: mpt:Mpe_A0242 glutamate-ammonia-ligase adenylyltransferase YP_001792539.1 KEGG: mpt:Mpe_A0243 putative transmembrane protein YP_001792540.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mpt:Mpe_A0244 putative nitrilase protein YP_001792541.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: mpt:Mpe_A0245 putative 2-octaprenyl-6-methoxyphenol hydroxylase oxidoreductase protein YP_001792542.1 KEGG: mpt:Mpe_A0133 putative primosomal protein; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases YP_001792543.1 KEGG: pol:Bpro_4264 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_001792544.1 TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: mpt:Mpe_A0198 putative ATP synthase epsilon chain protein YP_001792545.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_001792546.1 KEGG: mpt:Mpe_A0196 sodium-transporting two-sector ATPase; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit YP_001792547.1 KEGG: mpt:Mpe_A0195 sodium-transporting two-sector ATPase; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 alpha subunit YP_001792548.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex YP_001792549.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. YP_001792550.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 YP_001792551.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 YP_001792552.1 KEGG: mpt:Mpe_A0190 putative ATP synthase protein I AtpI YP_001792553.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: mms:mma_0269 gluconolactonase YP_001792554.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mpt:Mpe_A0188 putative acetyltransferase YP_001792555.1 PFAM: cytochrome B561; KEGG: vei:Veis_1276 cytochrome b561 YP_001792556.1 PFAM: cytochrome c prime; KEGG: pna:Pnap_0216 cytochrome c, class II YP_001792557.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: mpt:Mpe_A0187 phenazine biosynthesis protein, PhzF family YP_001792558.1 PFAM: aminotransferase class I and II; KEGG: mpt:Mpe_A0186 valine-pyruvate aminotransferase YP_001792559.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mpt:Mpe_A0184 hypothetical protein YP_001792560.1 KEGG: ajs:Ajs_3843 hypothetical protein YP_001792561.1 TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: mpt:Mpe_A3171 RNA polymerase sigma-32 factor YP_001792562.1 KEGG: cvi:CV_3503 probable sensor/response regulator hybrid; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001792563.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: ppd:Ppro_1341 response regulator receiver modulated diguanylate cyclase YP_001792564.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: cau:Caur_3534 diguanylate cyclase YP_001792565.1 KEGG: dvl:Dvul_0309 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: PAS domain containing protein YP_001792566.1 KEGG: sru:SRU_2224 photoactive yellow protein YP_001792567.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rfr:Rfer_0496 cation diffusion facilitator family transporter YP_001792568.1 PFAM: translation initiation factor SUI1; KEGG: rfr:Rfer_1757 translation initiation factor SUI1 YP_001792569.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: tbd:Tbd_2789 probable thiol:disulfide interchange protein YP_001792570.1 KEGG: mms:mma_0454 hypothetical protein YP_001792571.1 KEGG: ajs:Ajs_0145 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein YP_001792572.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; SMART: AAA ATPase; KEGG: ajs:Ajs_0146 sigma54 specific transcriptional regulator, fis family YP_001792573.1 PFAM: Invasion gene expression up-regulator SirB; KEGG: pol:Bpro_4728 invasion gene expression up-regulator, SirB YP_001792574.1 SMART: Water Stress and Hypersensitive response domain protein; KEGG: bte:BTH_I2944 hypothetical protein YP_001792575.1 KEGG: vei:Veis_3393 hypothetical protein YP_001792576.1 PFAM: protein of unknown function DUF214; KEGG: mpt:Mpe_A1825 hypothetical protein YP_001792577.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A1826 putative ATP-binding component of ABC transporter YP_001792578.1 KEGG: vei:Veis_3396 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_001792579.1 PFAM: periplasmic solute binding protein; KEGG: mex:Mext_2875 periplasmic solute binding protein YP_001792580.1 PFAM: ABC-3 protein; KEGG: cvi:CV_3065 high-affinity zinc transport system permease protein YP_001792581.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpe:BP3082 putative transport protein ATP-binding YP_001792583.1 PFAM: ferric-uptake regulator; KEGG: dac:Daci_4458 ferric uptake regulator, Fur family YP_001792584.1 PFAM: 17 kDa surface antigen; KEGG: mpt:Mpe_A0169 hypothetical protein YP_001792585.1 PFAM: histone family protein DNA-binding protein; KEGG: pol:Bpro_1551 histone-like DNA-binding protein YP_001792586.1 KEGG: gvi:gll1989 unknown protein YP_001792587.1 catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA YP_001792588.1 TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mpt:Mpe_A0991 putative ring-hydroxylation complex protein 4 YP_001792590.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: dac:Daci_0813 phenylacetate-CoA oxygenase, PaaJ subunit YP_001792591.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: dac:Daci_0812 phenylacetate-CoA oxygenase, PaaI subunit YP_001792592.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation YP_001792593.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA YP_001792594.1 PFAM: basic membrane lipoprotein; KEGG: vei:Veis_4425 basic membrane lipoprotein YP_001792595.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_4427 ABC transporter related YP_001792596.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_4428 inner-membrane translocator YP_001792597.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_4429 inner-membrane translocator YP_001792598.1 KEGG: mpt:Mpe_A2078 hypothetical protein YP_001792599.1 PFAM: molybdopterin binding domain; KEGG: mpt:Mpe_A2077 hypothetical protein YP_001792600.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: mpt:Mpe_A2076 glutamate--ammonia ligase YP_001792601.1 KEGG: mpt:Mpe_A2075 conserved hypothetical signal peptide protein YP_001792602.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: mpt:Mpe_A2074 putative nitrogen regulation protein NR(II) YP_001792603.1 KEGG: mpt:Mpe_A2073 putative nitrogen assimilation regulatory response regulator transcription regulator protein; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001792604.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: ajs:Ajs_3105 putative transcriptional regulator, Crp/Fnr family YP_001792605.1 PFAM: dienelactone hydrolase; KEGG: mpt:Mpe_A3005 carboxymethylenebutenolidase YP_001792607.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dar:Daro_0224 response regulator receiver:transcriptional regulatory protein, C-terminal YP_001792608.1 KEGG: pna:Pnap_3281 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_001792609.1 PFAM: AMP-dependent synthetase and ligase; KEGG: pna:Pnap_3282 AMP-dependent synthetase and ligase YP_001792610.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rme:Rmet_3520 ABC transporter-related protein YP_001792611.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo0118 ABC transporter ATP-binding protein YP_001792612.1 KEGG: azo:azo0119 probable ABC transporter substrate binding protein YP_001792613.1 PFAM: inner-membrane translocator; KEGG: eba:ebA3426 probable transmembrane ABC transporter protein YP_001792614.1 PFAM: inner-membrane translocator; KEGG: azo:azo0121 putative branched-chain amino acid transport permease YP_001792615.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: azo:azo1702 probable acyl-CoA dehydrogenase YP_001792616.1 PFAM: MaoC domain protein dehydratase; KEGG: pna:Pnap_3284 MaoC domain protein dehydratase YP_001792617.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dac:Daci_2390 electron transfer flavoprotein alpha/beta-subunit YP_001792618.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: mpt:Mpe_A1297 electron transfer flavoprotein alpha-subunit YP_001792619.1 PFAM: Ppx/GppA phosphatase; KEGG: mpt:Mpe_A3006 exopolyphosphatase YP_001792620.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate YP_001792621.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sus:Acid_4132 GCN5-related N-acetyltransferase YP_001792622.1 KEGG: eba:ebA5591 hypothetical protein YP_001792623.1 TIGRFAM: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related; KEGG: bja:bll6631 probable phosphatidylserine decarboxylase proenzyme YP_001792624.1 PFAM: aminotransferase class-III; KEGG: bbt:BBta_6209 putative glutamate-1-semialdehyde 2,1-aminomutase (GSA) (glutamate-1-semialdehyde aminotransferase) YP_001792625.1 KEGG: bbt:BBta_6210 putative membrane protein of unknown function YP_001792626.1 PFAM: glycosyl transferase group 1; KEGG: azo:azo0856 glycosyltransferase YP_001792627.1 PFAM: major facilitator superfamily MFS_1; KEGG: mpt:Mpe_A1454 hypothetical protein YP_001792628.1 KEGG: pna:Pnap_1209 alkaline phosphatase YP_001792629.1 PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: aci:ACIAD1197 hypothetical protein YP_001792630.1 PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dar:Daro_3576 TRAP C4-dicarboxylate transport system permease DctM subunit YP_001792631.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dar:Daro_3577 TRAP dicarboxylate transporter-DctP subunit YP_001792632.1 KEGG: dar:Daro_3578 hypothetical protein YP_001792633.1 PFAM: SirA family protein; KEGG: ajs:Ajs_2898 SirA family protein YP_001792635.1 PFAM: Ppx/GppA phosphatase; KEGG: mpt:Mpe_A3006 exopolyphosphatase YP_001792636.1 KEGG: pna:Pnap_2210 hypothetical protein YP_001792637.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: mms:mma_2655 cation transporter (MIT family) YP_001792638.1 PFAM: metallophosphoesterase; KEGG: ajs:Ajs_1203 metallophosphoesterase YP_001792639.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: azo:azo2159 conservd hypothetical membrane protein YP_001792640.1 KEGG: afw:Anae109_4197 hypothetical protein YP_001792641.1 PFAM: glycosyl transferase family 2; KEGG: afw:Anae109_4198 glycosyl transferase family 2 YP_001792642.1 PFAM: glycosyl transferase family 39; KEGG: azo:azo2162 conserved hypothetical protein, similar to glycosyltransferases YP_001792643.1 KEGG: azo:azo2314 glycosyltransferase YP_001792644.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: azo:azo2163 hypothetical protein YP_001792645.1 KEGG: mpt:Mpe_A1135 UTP--glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase YP_001792646.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mpt:Mpe_A1136 phosphoglycerate dehydrogenase-related protein YP_001792647.1 TIGRFAM: valyl-tRNA synthetase; KEGG: mpt:Mpe_A1137 putative valyl-tRNA synthetase YP_001792648.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA YP_001792649.1 PFAM: diacylglycerol kinase catalytic region; KEGG: tth:TTC1957 protein BmrU YP_001792650.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpd:RPD_0989 LysR, substrate-binding YP_001792651.1 PFAM: amidohydrolase 2; KEGG: dac:Daci_4449 amidohydrolase 2 YP_001792652.1 TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase; KEGG: pna:Pnap_2031 dimethylmenaquinone methyltransferase YP_001792653.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; Phosphogluconate dehydrogenase, NAD-binding, putative-like; KEGG: rfr:Rfer_0336 6-phosphogluconate dehydrogenase, NAD-binding YP_001792654.1 PFAM: amidohydrolase 2; KEGG: pna:Pnap_2029 amidohydrolase 2 YP_001792655.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway YP_001792656.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway YP_001792657.1 PFAM: oxidoreductase domain protein; KEGG: dac:Daci_4444 oxidoreductase domain protein YP_001792658.1 PFAM: Auxin Efflux Carrier; KEGG: eba:ebA5059 predicted permease YP_001792659.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: aav:Aave_3770 protein of unknown function DUF21 YP_001792660.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: bpt:Bpet0011 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_001792661.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine YP_001792662.1 TIGRFAM: dethiobiotin synthase; KEGG: pna:Pnap_4031 dethiobiotin synthase YP_001792663.1 KEGG: pol:Bpro_1580 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB YP_001792664.1 PFAM: cytochrome P450; KEGG: pna:Pnap_4029 cytochrome P450 YP_001792665.1 PFAM: small multidrug resistance protein; KEGG: ppu:PP_1701 SugE protein YP_001792666.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ppu:PP_2988 alcohol dehydrogenase, zinc-containing YP_001792667.1 PFAM: regulatory protein TetR; KEGG: bam:Bamb_4737 transcriptional regulator, TetR family YP_001792668.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_2954 ABC transporter related YP_001792669.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_0211 ABC transporter related YP_001792670.1 PFAM: inner-membrane translocator; KEGG: rfr:Rfer_0212 inner-membrane translocator YP_001792671.1 PFAM: inner-membrane translocator; KEGG: pna:Pnap_2951 inner-membrane translocator YP_001792672.1 PFAM: Extracellular ligand-binding receptor; KEGG: rfr:Rfer_0214 extracellular ligand-binding receptor YP_001792673.1 PFAM: alpha/beta hydrolase fold; KEGG: rfr:Rfer_0215 alpha/beta hydrolase YP_001792674.1 TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; KEGG: rfr:Rfer_0216 benzoate-CoA ligase family YP_001792675.1 PFAM: Aldehyde Dehydrogenase_; KEGG: pna:Pnap_2947 aldehyde dehydrogenase YP_001792676.1 KEGG: reh:H16_B1916 hypothetical protein YP_001792677.1 consists of N-terminal helix-turn-helix domain and C-terminal shikimate kinase-like domain which may bind benzoyl-CoA; controls inducible expression of the bzd catabolic operon that is involved in the anaerobic catabolism of benzoate YP_001792678.1 cleaves the ring of 2,3-dihydro-2,3-dihydroxybenzoyl-CoA forming 6-hydroxy-3-hexenoyl-CoA YP_001792679.1 KEGG: reh:H16_B1913 benzoyl-CoA dioxygenase B YP_001792680.1 TIGRFAM: benzoyl-CoA oxygenase/reductase, BoxA protein; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pna:Pnap_2942 oxidoreductase FAD/NAD(P)-binding domain protein YP_001792681.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pol:Bpro_1631 enoyl-CoA hydratase/isomerase YP_001792682.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: pna:Pnap_2940 3-hydroxybutyryl-CoA dehydrogenase YP_001792683.1 PFAM: MaoC domain protein dehydratase; KEGG: rfr:Rfer_0225 MaoC-like dehydratase YP_001792684.1 KEGG: rfr:Rfer_0226 beta-ketoadipyl CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase YP_001792685.1 KEGG: neu:NE0315 possible multicopper oxidase YP_001792686.1 KEGG: gsu:GSU1844 IPT/TIG domain protein, putative YP_001792687.1 PFAM: Fibronectin type III domain protein; KEGG: pen:PSEEN2822 hypothetical protein YP_001792688.1 catalyzes the formation of catechol from salicylate YP_001792689.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: pna:Pnap_3145 cupin 2, conserved barrel domain protein YP_001792690.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pna:Pnap_3146 fumarylacetoacetate (FAA) hydrolase YP_001792691.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: dac:Daci_3700 maleylacetoacetate isomerase YP_001792692.1 KEGG: eba:ebA733 hypothetical protein YP_001792693.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: eba:ebA732 C4-dicarboxylate uptake permease YP_001792694.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: eba:ebA729 dicarboxylate transport protein YP_001792695.1 KEGG: pna:Pnap_3867 hypothetical protein YP_001792696.1 PFAM: protein of unknown function DUF344; KEGG: xac:XAC0941 transcriptional regulator YP_001792697.1 PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: pna:Pnap_1803 ABC transporter domain protein YP_001792698.1 PFAM: CBS domain containing protein; KEGG: pna:Pnap_1141 putative signal-transduction protein with CBS domains YP_001792699.1 PFAM: Phosphoglycerate mutase; KEGG: aha:AHA_2360 phosphoglycerate mutase YP_001792700.1 KEGG: rca:Rcas_1443 hypothetical protein YP_001792701.1 KEGG: afw:Anae109_4000 metallophosphoesterase YP_001792702.1 proposed role in polysaccahride synthesis YP_001792703.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: pna:Pnap_1648 regulatory proteins, IclR YP_001792704.1 PFAM: UBA/THIF-type NAD/FAD binding protein; Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: pol:Bpro_1847 shikimate 5-dehydrogenase YP_001792705.1 PFAM: Extracellular ligand-binding receptor; KEGG: pna:Pnap_1650 extracellular ligand-binding receptor YP_001792706.1 PFAM: inner-membrane translocator; KEGG: pol:Bpro_1849 inner-membrane translocator YP_001792707.1 PFAM: inner-membrane translocator; KEGG: pna:Pnap_1652 inner-membrane translocator YP_001792708.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_1653 ABC transporter related YP_001792709.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_1852 ABC transporter related YP_001792710.1 KEGG: pol:Bpro_1853 4-hydroxyphenylpyruvate dioxygenase YP_001792711.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: pna:Pnap_1656 xylose isomerase domain protein TIM barrel YP_001792712.1 KEGG: dac:Daci_4212 hypothetical protein YP_001792713.1 PFAM: nucleoside recognition domain protein; KEGG: dar:Daro_3256 nucleoside recognition YP_001792714.1 PFAM: aldo/keto reductase; KEGG: azo:azo2535 probable aldo-keto reductase YP_001792716.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbt:BBta_2732 putative transcriptional regulatory protein, LysR family YP_001792717.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway YP_001792718.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway YP_001792719.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ppd:Ppro_0900 endonuclease/exonuclease/phosphatase YP_001792720.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile YP_001792721.1 KEGG: rfr:Rfer_2262 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein YP_001792722.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: rfr:Rfer_2263 periplasmic sensor hybrid histidine kinase YP_001792723.1 KEGG: rfr:Rfer_2264 hypothetical protein YP_001792724.1 PFAM: peptidase M48 Ste24p; KEGG: mpt:Mpe_A0578 hypothetical protein YP_001792725.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rfr:Rfer_3184 RND efflux system, outer membrane lipoprotein, NodT YP_001792726.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pna:Pnap_3548 efflux transporter, RND family, MFP subunit YP_001792727.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ajs:Ajs_2824 ABC transporter related YP_001792728.1 PFAM: protein of unknown function DUF214; KEGG: dar:Daro_3916 protein of unknown function DUF214 YP_001792729.1 KEGG: dac:Daci_0052 peptidoglycan-binding domain 1 protein YP_001792730.1 SMART: Rhodanese domain protein; KEGG: dar:Daro_1929 rhodanese-like YP_001792731.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pol:Bpro_2037 RND efflux system, outer membrane lipoprotein, NodT YP_001792732.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pna:Pnap_2886 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_001792733.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pol:Bpro_2035 secretion protein HlyD YP_001792734.1 PFAM: regulatory protein TetR; KEGG: rfr:Rfer_2067 transcriptional regulator, TetR family YP_001792735.1 PFAM: protein of unknown function DUF1232; KEGG: pol:Bpro_2926 hypothetical protein YP_001792736.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: rfr:Rfer_2543 hypothetical protein YP_001792737.1 KEGG: pol:Bpro_0891 cupin 2, conserved barrel YP_001792738.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_001792739.1 KEGG: pna:Pnap_3103 hypothetical protein YP_001792740.1 PFAM: basic membrane lipoprotein; KEGG: rfr:Rfer_3296 basic membrane lipoprotein YP_001792742.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: mpt:Mpe_A1176 putative FdhD protein YP_001792743.1 KEGG: pol:Bpro_0941 hypothetical protein YP_001792744.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: mpt:Mpe_A1173 formate dehydrogenase subunit C precursor YP_001792745.1 KEGG: pol:Bpro_0939 putative lipoprotein YP_001792746.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mpt:Mpe_A1171 formate dehydrogenase iron-sulfur subunit YP_001792747.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mpt:Mpe_A1170 formate dehydrogenase large subunit precursor YP_001792749.1 KEGG: mpt:Mpe_A1164 hypothetical protein YP_001792750.1 KEGG: mpt:Mpe_A1165 proline rich protein YP_001792751.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mpt:Mpe_A1166 putative iron-sulfur binding protein YP_001792752.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: mpt:Mpe_A1167 hypothetical protein YP_001792753.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis YP_001792754.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mpt:Mpe_A1169 sigma-54 dependent response regulator YP_001792755.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A1168 sensor histidine kinase YP_001792756.1 PFAM: outer membrane efflux protein; KEGG: azo:azo2554 putative outer membrane efflux protein YP_001792757.1 KEGG: azo:azo2555 HlyD family secretion protein YP_001792758.1 KEGG: sde:Sde_3233 hypothetical protein; TIGRFAM: outer membrane adhesin like proteiin; PFAM: Cadherin; glycosyl hydrolase BNR repeat-containing protein; Ig family protein; LVIVD repeat protein; SMART: Dystroglycan-type cadherin domain protein YP_001792759.1 KEGG: azo:azo2557 HlyD family secretion protein YP_001792760.1 KEGG: azo:azo2558 membrane protein with HlyD domain YP_001792761.1 KEGG: mpt:Mpe_A0809 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase YP_001792762.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rfr:Rfer_3761 secretion protein HlyD YP_001792763.1 PFAM: acriflavin resistance protein; KEGG: rfr:Rfer_3760 acriflavin resistance protein YP_001792764.1 KEGG: rfr:Rfer_3758 hypothetical protein YP_001792765.1 PFAM: protein of unknown function DUF156; KEGG: rfr:Rfer_3757 hypothetical protein YP_001792766.1 PFAM: OsmC family protein; KEGG: pna:Pnap_2833 OsmC family protein YP_001792767.1 PFAM: regulatory protein ArsR; KEGG: mpt:Mpe_A2424 transcriptional regulator YP_001792768.1 KEGG: mpt:Mpe_A2425 hypothetical protein YP_001792769.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mpt:Mpe_A1484 haloacid dehalogenase YP_001792770.1 KEGG: rme:Rmet_1518 fructose-bisphosphate aldolase, class II, Calvin cycle subtype; TIGRFAM: ketose-bisphosphate aldolase; fructose-bisphosphate aldolase, class II, Calvin cycle subtype; PFAM: ketose-bisphosphate aldolase class-II YP_001792771.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rme:Rmet_1514 phosphoglycolate phosphatase YP_001792772.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: rme:Rmet_1513 transketolase YP_001792773.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: rfr:Rfer_1392 phosphoribulokinase YP_001792774.1 PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: rme:Rmet_1511 inositol phosphatase/fructose-1,6-bisphosphatase YP_001792775.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: ajs:Ajs_0361 ribulose-phosphate 3-epimerase YP_001792776.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A1477 regulatory protein, LysR family YP_001792777.1 PFAM: regulatory protein MerR; KEGG: bvi:Bcep1808_5897 putative transcriptional regulator, MerR family YP_001792778.1 PFAM: protein of unknown function DUF445; KEGG: pna:Pnap_0221 protein of unknown function DUF445 YP_001792779.1 KEGG: pna:Pnap_3563 hypothetical protein YP_001792780.1 PFAM: protein of unknown function DUF938; Methyltransferase type 11; Methyltransferase type 12; KEGG: pol:Bpro_3364 protein of unknown function DUF938 YP_001792781.1 PFAM: K potassium transporter; KEGG: pol:Bpro_4252 K+ potassium transporter YP_001792782.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pol:Bpro_4253 two component transcriptional regulator, winged helix family YP_001792783.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_4254 periplasmic sensor signal transduction histidine kinase YP_001792784.1 PFAM: von Willebrand factor type A; KEGG: pna:Pnap_1976 von Willebrand factor, type A YP_001792785.1 PFAM: ATPase associated with various cellular activities AAA_5; CbbQ/NirQ/NorQ domain protein; KEGG: pna:Pnap_1977 CbbQ/NirQ/NorQ C-terminal domain protein YP_001792786.1 catalyzes the carboxylation of D-ribulose 1,5-bisphosphate in carbon dioxide fixation YP_001792787.1 PFAM: protein of unknown function DUF323; KEGG: ter:Tery_4351 serine/threonine protein kinase YP_001792788.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mpt:Mpe_A2426 hypothetical protein YP_001792789.1 PFAM: beta-lactamase domain protein; KEGG: mpt:Mpe_A2427 beta lactamase precursor YP_001792790.1 KEGG: mpt:Mpe_A2428 putative cytochrome c YP_001792791.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Flavocytochrome c sulphide dehydrogenase flavin-binding; KEGG: mpt:Mpe_A2429 putative sulfide dehydrogenase flavocytochrome c oxidoreductase protein YP_001792792.1 PFAM: Domain of unknown function DUF1791; KEGG: reh:H16_A3567 conserved hypothetical secreted protein YP_001792793.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: dar:Daro_3126 YeeE/YedE YP_001792795.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: dar:Daro_4041 YeeE/YedE YP_001792796.1 PFAM: SirA family protein; KEGG: tbd:Tbd_0574 hypothetical protein YP_001792797.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: mpt:Mpe_A2432 putative sulfur oxidation signal peptide protein YP_001792798.1 KEGG: pol:Bpro_2626 hypothetical protein YP_001792799.1 KEGG: mpt:Mpe_A2434 hypothetical protein YP_001792800.1 PFAM: Sulphur oxidation protein SoxZ; KEGG: mpt:Mpe_A2435 hypothetical protein YP_001792801.1 KEGG: mpt:Mpe_A2436 hypothetical protein YP_001792802.1 PFAM: cytochrome c class I; KEGG: mpt:Mpe_A2437 diheme cytochrome c SoxD YP_001792803.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: mpt:Mpe_A2438 putative sulfite oxidase molybdopterin subunit YP_001792804.1 KEGG: aav:Aave_3377 putative transmembrane anti-sigma factor YP_001792805.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: aav:Aave_3376 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001792806.1 PFAM: Secreted repeat of unknown function; KEGG: dar:Daro_0520 secreted repeat of unknown function YP_001792807.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: aeh:Mlg_1275 C4-dicarboxylate transporter/malic acid transport protein YP_001792808.1 PFAM: type II and III secretion system protein; NolW domain protein; KEGG: rme:Rmet_4706 type II and III secretion system protein YP_001792810.1 PFAM: electron transport protein SCO1/SenC; KEGG: rso:RSc2292 putative transmembrane protein YP_001792811.1 KEGG: rme:Rmet_4696 hypothetical protein YP_001792812.1 PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: gur:Gura_3046 peptidylprolyl isomerase, FKBP-type YP_001792813.1 PFAM: Fibronectin type III domain protein; multicopper oxidase type 2; KEGG: gme:Gmet_2163 integrins alpha chain:multicopper oxidase, type 2 YP_001792814.1 PFAM: chemotaxis sensory transducer; KEGG: rfr:Rfer_0898 methyl-accepting chemotaxis sensory transducer YP_001792815.1 PFAM: response regulator receiver; KEGG: rfr:Rfer_0899 response regulator receiver domain protein YP_001792816.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rfr:Rfer_0900 anti-sigma-factor antagonist (STAS) domain protein YP_001792817.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: rfr:Rfer_0901 CheA signal transduction histidine kinases YP_001792818.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: azo:azo0407 putative methyl-accepting chemotaxis protein YP_001792819.1 PFAM: CheW domain protein; KEGG: rfr:Rfer_0903 CheW protein YP_001792820.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins YP_001792821.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: nha:Nham_4624 protein of unknown function DUF395, YeeE/YedE YP_001792822.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: azc:AZC_2083 YeeE/YedE family protein YP_001792823.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mpt:Mpe_A0122 thiosulfate binding protein YP_001792824.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A0124 ABC type transporter YP_001792825.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A0125 ABC type transporter YP_001792826.1 KEGG: mpt:Mpe_A0126 ABC type ATPase; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_001792827.1 PFAM: PASTA domain containing protein; KEGG: azo:azo1264 putative transmembrane sensor protein YP_001792828.1 PFAM: gamma-glutamyltranspeptidase; KEGG: bxe:Bxe_B1050 gamma-glutamyltransferase YP_001792829.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_3039 transcriptional regulator, LysR family YP_001792830.1 KEGG: mpt:Mpe_A0118 hypothetical protein YP_001792831.1 PFAM: Phosphoglycerate mutase; KEGG: vei:Veis_1484 phosphoglycerate mutase YP_001792832.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA YP_001792833.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate YP_001792834.1 TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mpt:Mpe_A3185 putative tRNA/rRNA methyltransferase protein YP_001792835.1 KEGG: mpt:Mpe_A3184 putative phosphoribosyl transferase YP_001792836.1 KEGG: mpt:Mpe_A3183 biotin synthesis protein BioC YP_001792837.1 TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; cytochrome C oxidase subunit II transmembrane region; KEGG: mpt:Mpe_A3181 putative cytochrome c oxidase polypeptide II precursor YP_001792838.1 KEGG: ajs:Ajs_3536 cytochrome-c oxidase; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_001792840.1 involved in the insertion of copper into subunit I of cytochrome C oxidase YP_001792841.1 KEGG: mpt:Mpe_A3178 hypothetical protein YP_001792842.1 PFAM: cytochrome c oxidase subunit III; KEGG: mpt:Mpe_A3177 putative cytochrome c oxidase subunit III transmembrane protein YP_001792843.1 KEGG: bch:Bcen2424_6561 hypothetical protein YP_001792844.1 KEGG: mpt:Mpe_A3176 hypothetical protein YP_001792845.1 KEGG: mpt:Mpe_A3175 hypothetical protein YP_001792846.1 PFAM: cytochrome oxidase assembly; KEGG: mpt:Mpe_A3174 putative heme O oxygenase (cytochrome aa3-controlling) transmembrane protein YP_001792847.1 converts protoheme IX and farnesyl diphosphate to heme O YP_001792848.1 PFAM: electron transport protein SCO1/SenC; KEGG: mpt:Mpe_A3172 putative lipoprotein YP_001792849.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0181 ferric-enterobactin ABC transporter ATPase YP_001792850.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: rfr:Rfer_1153 OmpA/MotB YP_001792851.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mpt:Mpe_A3384 putative apolipoprotein N-acyltransferase transmembrane YP_001792852.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: mpt:Mpe_A3385 transport protein YP_001792853.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mpt:Mpe_A3386 hypothetical protein YP_001792854.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: aav:Aave_0808 transcriptional regulator, TraR/DksA family YP_001792855.1 KEGG: mpt:Mpe_A3388 hypothetical protein YP_001792856.1 heat shock protein involved in degradation of misfolded proteins YP_001792857.1 heat shock protein involved in degradation of misfolded proteins YP_001792858.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP YP_001792859.1 KEGG: mpt:Mpe_A3392 hypothetical protein YP_001792860.1 KEGG: dar:Daro_0832 nitrate transport ATP-binding subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase YP_001792861.1 TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A1391 NO3-/NO2-ABC transporter YP_001792862.1 KEGG: mpt:Mpe_A1392 NO3-/NO2-ABC transporter YP_001792863.1 KEGG: mpt:Mpe_A0903 methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: ArgK protein; methylmalonyl-CoA mutase; cobalamin B12-binding domain protein YP_001792864.1 PFAM: beta-lactamase domain protein; KEGG: mpt:Mpe_A1376 methyl parathion hydrolase YP_001792865.1 KEGG: mpt:Mpe_A1438 hypothetical protein YP_001792866.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mpt:Mpe_A1437 uncharacterized FAD-dependent dehydrogenase YP_001792867.1 PFAM: protein of unknown function DUF88; KEGG: ajs:Ajs_1706 protein of unknown function DUF88 YP_001792868.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mpt:Mpe_A2604 signal transduction histidine kinase glucose-6-phosphate-like protein YP_001792869.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mpt:Mpe_A2603 two-component response regulator YP_001792870.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: vei:Veis_4977 40-residue YVTN family beta-propeller repeat protein YP_001792872.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: pna:Pnap_0633 sodium/hydrogen exchanger YP_001792873.1 catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA YP_001792874.1 KEGG: bja:blr5152 hypothetical protein YP_001792875.1 KEGG: pol:Bpro_2130 antibiotic biosynthesis monooxygenase YP_001792876.1 PFAM: YaeQ family protein; KEGG: mfa:Mfla_0160 YaeQ YP_001792877.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein YP_001792878.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: pol:Bpro_3678 L-lactate dehydrogenase (cytochrome) YP_001792879.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azo:azo1015 probable transcriptional regulator, LysR family YP_001792880.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_001792881.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_001792882.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_001792883.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_001792884.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_001792885.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter YP_001792886.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_001792887.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_001792888.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit YP_001792889.1 PFAM: ribosomal protein L1; KEGG: mpt:Mpe_A3454 50S ribosomal protein L1 YP_001792890.1 PFAM: ribosomal protein L11; KEGG: bte:BTH_I3080 ribosomal protein L11 YP_001792891.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: mpt:Mpe_A3456 transcription antitermination protein NusG YP_001792892.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force YP_001792893.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_001792894.1 TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; KEGG: bbr:BB0210 uracil-DNA glycosylase YP_001792895.1 PFAM: Indole-3-glycerol phosphate synthase; KEGG: mpt:Mpe_A3460 indole-3-glycerol-phosphate synthase YP_001792896.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_001792897.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: mpt:Mpe_A3462 putative panthranilate synthase component II (glutamine amido-transferase) protein YP_001792898.1 PFAM: type II secretion system protein; KEGG: tbd:Tbd_1294 type II secretion system protein F YP_001792899.1 PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: tbd:Tbd_1295 type II secretion system protein YP_001792900.1 KEGG: tbd:Tbd_1296 hypothetical protein YP_001792901.1 KEGG: ppf:Pput_2291 hypothetical protein YP_001792902.1 KEGG: tbd:Tbd_1299 probable prolin-rich transmembrane protein YP_001792903.1 PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: tbd:Tbd_1300 type II secretion system protein D YP_001792904.1 KEGG: mfa:Mfla_2413 methylation YP_001792905.1 PFAM: type II secretion system protein G; KEGG: tbd:Tbd_1441 type II secretion system protein G YP_001792906.1 KEGG: ppu:PP_3475 hypothetical protein YP_001792907.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: pfo:Pfl_1980 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001792908.1 PFAM: Extracellular ligand-binding receptor; KEGG: pfo:Pfl_1979 cytochrome c, putative YP_001792909.1 PFAM: electron transport protein SCO1/SenC; KEGG: pen:PSEEN2852 SCO1/SenC family protein YP_001792910.1 PFAM: electron transport protein SCO1/SenC; KEGG: pen:PSEEN2853 Sco1/SenC family protein YP_001792911.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: cytochrome d1 heme region; KEGG: pfo:Pfl_1976 hypothetical protein YP_001792912.1 KEGG: pfo:Pfl_1975 hypothetical protein YP_001792913.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: nmu:Nmul_A0008 periplasmic sensor signal transduction histidine kinase YP_001792914.1 PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: mfa:Mfla_2202 response regulator receiver domain protein (CheY-like) YP_001792915.1 amylomaltase; acts to release glucose from maltodextrins YP_001792916.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine YP_001792917.1 TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aav:Aave_0440 phosphoglycolate phosphatase YP_001792918.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: ajs:Ajs_0361 ribulose-phosphate 3-epimerase YP_001792919.1 PFAM: ApaG domain protein; KEGG: rso:RSc2878 ApaG YP_001792920.1 KEGG: mpt:Mpe_A3469 putative site-specific recombinase transmembrane protein YP_001792921.1 PFAM: MltA domain protein; 3D domain protein; KEGG: mpt:Mpe_A3470 membrane-bound lytic murein transglycosylase A YP_001792922.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: acr:Acry_0567 diguanylate cyclase YP_001792923.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: mpt:Mpe_A3501 transcriptional regulator-like protein protein YP_001792924.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates YP_001792925.1 TIGRFAM: translation initiation factor IF-1; PFAM: RNA binding S1 domain protein; S1 IF1 family protein; KEGG: dac:Daci_4661 translation initiation factor IF-1 YP_001792927.1 KEGG: pol:Bpro_3230 hypothetical protein YP_001792928.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione YP_001792929.1 PFAM: aminoglycoside phosphotransferase; KEGG: mpt:Mpe_A0201 hypothetical protein YP_001792930.1 PFAM: Organic solvent tolerance protein; KEGG: mpt:Mpe_A0202 putative organic solvent tolerance transmembrane protein YP_001792931.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: mpt:Mpe_A0203 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001792932.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin YP_001792933.1 KEGG: mpt:Mpe_A0205 hypothetical protein YP_001792934.1 PFAM: guanine-specific ribonuclease N1 and T1; KEGG: vei:Veis_4808 guanine-specific ribonuclease N1 and T1 YP_001792935.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate YP_001792936.1 KEGG: mpt:Mpe_A0208 two component sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001792937.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: aav:Aave_4653 two component transcriptional regulator, LuxR family YP_001792938.1 KEGG: mpt:Mpe_A0210 thiamine-phosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein YP_001792939.1 PFAM: phosphatidylglycerophosphatase A; KEGG: pol:Bpro_4475 phosphatidylglycerophosphatase A YP_001792940.1 PFAM: CinA domain protein; KEGG: ajs:Ajs_0354 CinA domain protein YP_001792941.1 PFAM: ribosomal protein L17; KEGG: pna:Pnap_0346 ribosomal protein L17 YP_001792942.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_001792943.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_001792944.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_001792945.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_001792946.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif YP_001792947.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_001792948.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_001792949.1 late assembly protein YP_001792950.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_001792951.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_001792952.1 binds 5S rRNA along with protein L5 and L25 YP_001792953.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_001792954.1 PFAM: ribosomal protein S8; KEGG: pol:Bpro_0489 ribosomal protein S8 YP_001792955.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif YP_001792956.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_001792957.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_001792958.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_001792959.1 TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GshA; KEGG: mpt:Mpe_A0173 putative glutamate--cysteine ligase YP_001792960.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: pol:Bpro_0184 ammonium transporter YP_001792961.1 PFAM: nitrogen regulatory protein P-II; KEGG: mpt:Mpe_A0171 nitrogen regulatory protein P-II-2 YP_001792962.1 KEGG: mpt:Mpe_A0170 putative MG(2+) chelatase family protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001792963.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase YP_001792964.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP YP_001792966.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ajs:Ajs_0076 transcriptional regulator, LysR family YP_001792967.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: fre:Franean1_5550 prolyl oligopeptidase YP_001792968.1 PFAM: protein of unknown function UPF0054; KEGG: mpt:Mpe_A3240 hypothetical protein YP_001792969.1 PFAM: PhoH family protein; KEGG: mpt:Mpe_A3239 putative PhoH-like protein YP_001792970.1 PFAM: ATP-binding region ATPase domain protein; KEGG: mpt:Mpe_A3238 signal transduction histidine kinase-like protein YP_001792971.1 PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: mpt:Mpe_A3237 response regulator YP_001792972.1 plays an essential role in ATP-dependent branch migration of the Holliday junction YP_001792973.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_001792974.1 PFAM: Phosphoglycerate mutase; KEGG: mpt:Mpe_A0330 putative phosphoglycerate mutase 2 protein YP_001792975.1 PFAM: Domain of unknown function DUF1840; KEGG: mpt:Mpe_A0332 hypothetical protein YP_001792976.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mpt:Mpe_A0710 putative 1-acylglycerol-3-phosphate O-acyltransferase YP_001792977.1 KEGG: mpt:Mpe_A0709 putative dihydroorotase-like protein YP_001792978.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis YP_001792979.1 PFAM: phosphoribosyltransferase; KEGG: mpt:Mpe_A0707 bifunctional regulator/uracil phosphoribosyltransferase YP_001792980.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function YP_001792981.1 PFAM: protein of unknown function DUF179; KEGG: mpt:Mpe_A0705 hypothetical protein YP_001792982.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: mpt:Mpe_A0704 deoxyribodipyrimidine photolyase YP_001792983.1 PFAM: acriflavin resistance protein; KEGG: mpt:Mpe_A2137 putative transporter lipoprotein transmembrane YP_001792984.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mpt:Mpe_A2136 putative transporter lipoprotein transmembrane YP_001792985.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rfr:Rfer_1673 diguanylate cyclase YP_001792986.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: aav:Aave_0905 CheA signal transduction histidine kinase YP_001792987.1 PFAM: chemotaxis sensory transducer; KEGG: mpt:Mpe_A3187 twitching motility protein YP_001792988.1 PFAM: CheW domain protein; KEGG: mpt:Mpe_A3188 twitching motility signal transduction protein YP_001792989.1 PFAM: response regulator receiver; KEGG: mpt:Mpe_A3189 twitching motility protein YP_001792990.1 PFAM: response regulator receiver; KEGG: mpt:Mpe_A3190 twitching motility, CheY-like protein YP_001792991.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: mpt:Mpe_A3191 rubredoxin YP_001792992.1 PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: mpt:Mpe_A3192 hydroxymethylpyrimidine kinase YP_001792993.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway YP_001792994.1 PFAM: Aldose 1-epimerase; KEGG: mpt:Mpe_A3194 aldose 1-epimerase YP_001792995.1 PFAM: phosphofructokinase; KEGG: dac:Daci_5255 6-phosphofructokinase YP_001792996.1 TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mpt:Mpe_A3197 putative UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase transmembrane protein YP_001792997.1 PFAM: protein of unknown function UPF0227; KEGG: pna:Pnap_3401 protein of unknown function UPF0227 YP_001792998.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rfr:Rfer_4047 3-oxoacyl-(acyl-carrier-protein) reductase YP_001792999.1 PFAM: ribonuclease II; KEGG: mpt:Mpe_A3199 hypothetical protein YP_001793000.1 TIGRFAM: TonB family protein; KEGG: mpt:Mpe_A3200 periplasmic protein/biopolymer transport YP_001793001.1 TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: mpt:Mpe_A3202 putative peptidoglycan biosynthesis-related protein YP_001793002.1 KEGG: mpt:Mpe_A3203 hypothetical protein YP_001793003.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mpt:Mpe_A3204 thioredoxin family protein, putative YP_001793004.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: mpt:Mpe_A3206 putative biotin carboxyl carrier protein of acetyl-CoA carboxylase (BccP) YP_001793005.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: mpt:Mpe_A3207 putative biotin carboxylase protein YP_001793006.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype YP_001793007.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: mpt:Mpe_A3209 hypothetical protein YP_001793008.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mpt:Mpe_A3433 AhpC/TSA-family protein YP_001793009.1 primary binding protein; helps mediate assembly; involved in translation fidelity YP_001793010.1 one of the stabilizing components for the large ribosomal subunit YP_001793011.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_001793012.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation YP_001793013.1 TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: pna:Pnap_0208 ribosomal protein L22 YP_001793014.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_001793015.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_001793016.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_001793017.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_001793018.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_001793019.1 PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: mpt:Mpe_A0275 putative two component response regulator transcription regulator protein YP_001793020.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A0274 putative two component sensor histidine kinase transcription regulator protein YP_001793021.1 KEGG: mpt:Mpe_A0273 hypothetical protein YP_001793022.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; KEGG: mpt:Mpe_A0272 Sun protein YP_001793024.1 PFAM: LemA family protein; KEGG: pna:Pnap_3638 LemA family protein YP_001793025.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: bbr:BB0421 hypothetical protein YP_001793026.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_001793027.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: reh:H16_B0226 UDP-glucose 4-epimerase YP_001793028.1 KEGG: vei:Veis_1320 hypothetical protein YP_001793029.1 TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: mpt:Mpe_A1067 putative ubiquinone biosynthesis protein UbiB YP_001793030.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: rfr:Rfer_1295 hypothetical protein YP_001793031.1 PFAM: protein of unknown function DUF502; KEGG: mpt:Mpe_A1069 putatives membrane protein YP_001793032.1 TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mpt:Mpe_A1070 putative aspartyl-tRNA synthetase protein YP_001793033.1 PFAM: UbiA prenyltransferase; KEGG: azo:azo3613 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_001793034.1 PFAM: NUDIX hydrolase; KEGG: mpt:Mpe_A1071 putative dATP pyrophosphohydrolase YP_001793035.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mpt:Mpe_A1072 hypothetical protein YP_001793036.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: mpt:Mpe_A1073 phospholipase D/transphosphatidylase protein YP_001793037.1 putative metalloprotease YP_001793038.1 KEGG: pna:Pnap_3576 hypothetical protein YP_001793039.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis YP_001793040.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0446 putative polar amino acid transport system ATP-binding protein YP_001793041.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A0445 amino acid permease YP_001793042.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mpt:Mpe_A0444 putative ABC transporter protein, putative glutamate/aspartate transmembrane subunit YP_001793043.1 PFAM: extracellular solute-binding protein family 3; KEGG: aav:Aave_4073 extracellular solute-binding protein, family 3 YP_001793044.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A0442 putative transcription regulator protein YP_001793045.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0439 putative composite ATP-binding transmembrane ABC transporter protein YP_001793046.1 PFAM: thioesterase superfamily protein; KEGG: mpt:Mpe_A0438 acyl-CoA hydrolase-like protein YP_001793047.1 KEGG: bch:Bcen2424_0149 hypothetical protein YP_001793048.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rso:RSc0476 enoyl-CoA hydratase YP_001793049.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001793050.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: mpt:Mpe_A0417 putative 3-hydroxyacyl-CoA dehydrogenase oxidoreductase YP_001793051.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mpt:Mpe_A0419 putative acyl-CoA dehydrogenase oxidoreductase protein YP_001793052.1 PFAM: regulatory protein TetR; KEGG: mpt:Mpe_A0420 TetR family regulatory protein YP_001793053.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mpt:Mpe_A0423 hypothetical protein YP_001793054.1 PFAM: 17 kDa surface antigen; KEGG: mpt:Mpe_A0424 outer membrane lipoprotein YP_001793055.1 KEGG: pol:Bpro_2357 hypothetical protein YP_001793056.1 PFAM: Domain of unknown function DUF1854; KEGG: bpa:BPP3181 hypothetical protein YP_001793057.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A1021 putative ABC transporter YP_001793058.1 catalyze the formation of cyanophycin which may act to store excess nitrogen YP_001793059.1 catalyze the formation of cyanophycin which may act to store excess nitrogen YP_001793060.1 PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: mpt:Mpe_A1207 hypothetical protein YP_001793061.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: aav:Aave_1960 methyl-accepting chemotaxis sensory transducer YP_001793062.1 KEGG: mpt:Mpe_A0319 hypothetical protein YP_001793063.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mpt:Mpe_A0318 hypothetical protein YP_001793064.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: mpt:Mpe_A0086 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B YP_001793065.1 KEGG: mpt:Mpe_A0087 hypothetical protein YP_001793066.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate YP_001793067.1 KEGG: mpt:Mpe_A0089 DNA-(apurinic or apyrimidinic site) lyase; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase YP_001793068.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: sit:TM1040_2627 protein of unknown function UPF0052 and CofD YP_001793069.1 KEGG: bvi:Bcep1808_7527 hypothetical protein YP_001793070.1 PFAM: beta-lactamase domain protein; KEGG: aav:Aave_0282 beta-lactamase domain protein YP_001793071.1 KEGG: pau:PA14_00960 putative lipoprotein YP_001793072.1 TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: bbr:BB0814 hypothetical protein YP_001793073.1 TIGRFAM: type IV / VI secretion system protein, DotU family; type VI secretion system OmpA/MotB family protein; PFAM: OmpA/MotB domain protein; KEGG: azo:azo3891 hypothetical protein YP_001793074.1 TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: azo:azo3890 conserved hypothetical ImcF-related protein YP_001793075.1 KEGG: azo:azo3889 hypothetical protein YP_001793076.1 SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: azo:azo3888 putative serine/threonine kinase YP_001793077.1 PFAM: Peptidase M15A; KEGG: bfr:BF2347 hypothetical protein YP_001793078.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: art:Arth_3251 glyoxalase/bleomycin resistance protein/dioxygenase YP_001793079.1 PFAM: OmpA/MotB domain protein; KEGG: nwi:Nwi_3028 OmpA/MotB YP_001793080.1 SMART: protein phosphatase 2C domain protein; KEGG: azo:azo3885 putative phosphoprotein phosphatase YP_001793081.1 TIGRFAM: type VI secretion system FHA domain protein; PFAM: Forkhead-associated protein; KEGG: azo:azo3884 hypothetical regulatory protein YP_001793082.1 KEGG: ddi:DDB_0191488 zipper-like domain-containing protein YP_001793083.1 PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: azo:azo3908 putative serine/threonine protein kinase YP_001793084.1 PFAM: histidine kinase HAMP region domain protein; KEGG: azo:azo3909 probable sensor protein YP_001793086.1 KEGG: azo:azo2482 putative hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001793087.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain YP_001793088.1 PFAM: cation transporter; KEGG: dac:Daci_5998 cation transporter YP_001793089.1 KEGG: hch:HCH_04281 hypothetical protein YP_001793090.1 KEGG: mxa:MXAN_7132 hypothetical protein YP_001793091.1 KEGG: mxa:MXAN_7136 hypothetical protein YP_001793092.1 KEGG: mxa:MXAN_7135 hypothetical protein YP_001793094.1 KEGG: mxa:MXAN_1306 hypothetical protein YP_001793095.1 KEGG: mxa:MXAN_7133 hypothetical protein YP_001793096.1 KEGG: hch:HCH_07060 hypothetical protein YP_001793097.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; Gp5 domain protein; KEGG: pae:PA0095 hypothetical protein YP_001793098.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 11; Methyltransferase type 12; SMART: Tetratricopeptide domain protein; KEGG: azo:azo3907 hypothetical protein YP_001793099.1 KEGG: plu:plu0964 insecticidal toxin complex protein TccC5 YP_001793101.1 KEGG: azo:azo3903 putative ATP-dependent Clp protease, ATP-binding subunit ClpB; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase AAA-2 domain protein; SMART: AAA ATPase YP_001793102.1 TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: azo:azo3902 putative cytoplasmic protein, SciB YP_001793103.1 TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: azo:azo3901 putative cytoplasmic protein, SciC YP_001793104.1 TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: azo:azo3900 putative cytoplasmic protein, SciD YP_001793105.1 TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: azo:azo3898 putative cytoplasmic protein,SciK YP_001793106.1 PFAM: protein of unknown function DUF796; KEGG: azo:azo3897 putative cytoplasmic protein,SciM YP_001793107.1 TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: azo:azo3896 putative cytoplasmic protein, SciI YP_001793108.1 TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: azo:azo3895 putative cytoplasmic protein,SciH YP_001793109.1 TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein; KEGG: xcv:XCV4202 hypothetical protein YP_001793110.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; KEGG: xac:XAC4113 YapH protein YP_001793111.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: pna:Pnap_3704 polypeptide-transport-associated domain protein, ShlB-type YP_001793112.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sus:Acid_6889 tetratricopeptide TPR_2 repeat protein YP_001793113.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mpt:Mpe_A1150 signal transduction histidine kinase-like protein YP_001793114.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rfr:Rfer_2039 two component transcriptional regulator, LuxR family YP_001793115.1 PFAM: regulatory protein LuxR; KEGG: pol:Bpro_4220 transcriptional regulator, LuxR family YP_001793116.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: pol:Bpro_4219 transcriptional regulator, Crp/Fnr family YP_001793117.1 PFAM: Tetratricopeptide TPR_4; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: bbt:BBta_6648 putative adenylate cyclase YP_001793118.1 KEGG: dra:DR_A0144 hypothetical protein YP_001793119.1 KEGG: sma:SAV3599 peroxidase YP_001793120.1 PFAM: Patatin; KEGG: pmy:Pmen_2024 patatin YP_001793121.1 PFAM: peptidase M48 Ste24p; KEGG: mpt:Mpe_A0093 conserved hypothetical signal peptide protein YP_001793122.1 PFAM: major facilitator superfamily MFS_1; KEGG: azo:azo3975 putative AmpG protein YP_001793123.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: mpt:Mpe_A3697 hypothetical protein YP_001793124.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: tbd:Tbd_2401 thioredoxin YP_001793125.1 type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase YP_001793126.1 KEGG: cau:Caur_0819 hypothetical protein YP_001793127.1 KEGG: cau:Caur_0818 ATPase-like protein YP_001793128.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_001793130.1 KEGG: ava:Ava_1029 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001793131.1 KEGG: sus:Acid_2684 histidine kinase YP_001793132.1 PFAM: Two component regulator propeller; KEGG: mxa:MXAN_7206 sensor histidine kinase/response regulator YP_001793133.1 PFAM: cytochrome c class I; KEGG: syx:SynWH7803_0752 cytochrome c6 YP_001793134.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rfr:Rfer_0247 two component, sigma54 specific, transcriptional regulator, fis family YP_001793135.1 PFAM: histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rfr:Rfer_0246 histidine kinase YP_001793136.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: hip:CGSHiEE_05405 Sel1 domain protein repeat-containing protein YP_001793137.1 PFAM: TPR repeat-containing protein; KEGG: cpt:CpB0720 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase YP_001793138.1 PFAM: cytochrome c assembly protein; KEGG: gsu:GSU0705 cytochrome c biogenesis protein, CcmF/CcyK/CcsA family YP_001793139.1 KEGG: nca:Noca_2201 ResB family protein YP_001793140.1 KEGG: rfr:Rfer_0259 hypothetical protein YP_001793141.1 PFAM: NHL repeat containing protein; KEGG: gsu:GSU3225 NHL repeat domain protein YP_001793142.1 PFAM: NHL repeat containing protein; KEGG: afw:Anae109_1838 NHL repeat containing protein YP_001793143.1 KEGG: gur:Gura_2745 hypothetical protein YP_001793144.1 KEGG: gur:Gura_3254 hypothetical protein YP_001793145.1 PFAM: Tetratricopeptide TPR_4; KEGG: tcr:506401.190 hypothetical protein Pfam: Myosin_tail_1 FliD_C Nnf1 DUF593 PROSITE: GLU_RICH YP_001793146.1 PFAM: Tetratricopeptide TPR_4; KEGG: ade:Adeh_1603 lytic transglycosylase YP_001793147.1 PFAM: cytochrome c class I; KEGG: bbr:BB4582 putative cytochrome c YP_001793148.1 KEGG: gur:Gura_2745 hypothetical protein YP_001793150.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mxa:MXAN_0469 putative foldase protein PrsA YP_001793151.1 KEGG: gsu:GSU0618 cytochrome c family protein YP_001793152.1 PFAM: NHL repeat containing protein; KEGG: gme:Gmet_1869 NHL repeat protein YP_001793153.1 PFAM: cytochrome c class I; KEGG: sus:Acid_3506 hypothetical protein YP_001793154.1 PFAM: cytochrome c class I; KEGG: rme:Rmet_6106 putative high-affinity Fe2+/Pb2+ permease YP_001793156.1 PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: rca:Rcas_2653 response regulator receiver and SARP domain protein YP_001793157.1 PFAM: cyclic nucleotide-binding; KEGG: dac:Daci_5739 cyclic nucleotide-binding protein YP_001793158.1 KEGG: mpt:Mpe_A0562 serine-pyruvate aminotransferase YP_001793159.1 KEGG: ajs:Ajs_3366 integron integrase YP_001793160.1 PFAM: Integrase catalytic region; KEGG: pol:Bpro_4706 integrase, catalytic region YP_001793161.1 PFAM: transposase IS3/IS911 family protein; KEGG: pol:Bpro_4705 hypothetical protein YP_001793164.1 KEGG: vvy:VV1883 hypothetical protein YP_001793166.1 KEGG: aav:Aave_4358 transposition helper protein YP_001793167.1 PFAM: transposase IS3/IS911 family protein; KEGG: bpt:Bpet4600 putative transposase YP_001793168.1 PFAM: Integrase catalytic region; KEGG: sbl:Sbal_4350 integrase, catalytic region YP_001793169.1 KEGG: aav:Aave_4358 transposition helper protein YP_001793170.1 PFAM: Integrase catalytic region; KEGG: aav:Aave_3792 integrase, catalytic region YP_001793171.1 PFAM: UspA domain protein; KEGG: pol:Bpro_2222 UspA YP_001793172.1 PFAM: Integral membrane protein TerC; KEGG: pfo:Pfl_3259 integral membrane protein TerC YP_001793173.1 KEGG: har:HEAR0214 putative universal stress protein UspA YP_001793174.1 PFAM: regulatory protein LysR; KEGG: rfr:Rfer_3458 transcriptional regulator, LysR family YP_001793175.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: afw:Anae109_0604 activator of HSP90 ATPase 1 family protein YP_001793176.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: psa:PST_3589 glyoxylase I family protein YP_001793177.1 PFAM: Domain of unknown function DUF1801; KEGG: cph:Cpha266_1691 hypothetical protein YP_001793179.1 KEGG: tbd:Tbd_1198 hypothetical protein YP_001793180.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A0157 putative LysR-family regulatory protein YP_001793181.1 KEGG: mpt:Mpe_A0158 2-haloacid dehalogenase; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase YP_001793182.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA YP_001793183.1 PFAM: type III restriction protein res subunit; KEGG: neu:NE2306 hypothetical protein YP_001793184.1 KEGG: amt:Amet_3301 hypothetical protein YP_001793185.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: neu:NE2309 adenine specific DNA methylase Mod YP_001793186.1 KEGG: tbd:Tbd_0934 hypothetical protein YP_001793187.1 PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: eba:ebA2413 helicase (SNF2 family) YP_001793188.1 KEGG: aav:Aave_2031 hypothetical protein YP_001793189.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mms:mma_3324 drug resistance MFS transporter, Bcr/CflA family YP_001793190.1 KEGG: aav:Aave_1245 hypothetical protein YP_001793191.1 KEGG: eba:ebA6472 putative response regulator receiver; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001793192.1 PFAM: response regulator receiver; KEGG: azo:azo1491 probable polar differentiation response regulator YP_001793193.1 KEGG: eba:ebA6478 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001793194.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: mpt:Mpe_A2050 outer membrane protein YP_001793195.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mpt:Mpe_A0213 putative 2-hydroxyacid dehydrogenase in PhoH-CsgG intergenic region YP_001793196.1 PFAM: putative RNA methylase; THUMP domain protein; KEGG: ajs:Ajs_0350 putative RNA methylase YP_001793197.1 PFAM: protein of unknown function DUF1508; KEGG: ecx:EcHS_A2222 hypothetical protein YP_001793198.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pol:Bpro_0156 glyoxalase/bleomycin resistance protein/dioxygenase YP_001793199.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: gsu:GSU0018 transcriptional regulator, GntR family/aminotransferase class-I YP_001793201.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mpt:Mpe_A3042 ribosomal small subunit pseudouridine synthase A protein YP_001793203.1 KEGG: pol:Bpro_0398 hypothetical protein YP_001793204.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bmu:Bmul_5046 carboxymuconolactone decarboxylase YP_001793205.1 KEGG: dar:Daro_1853 hypothetical protein YP_001793206.1 KEGG: rca:Rcas_0081 hypothetical protein YP_001793207.1 PFAM: protein of unknown function DUF433; KEGG: ava:Ava_1741 protein of unknown function DUF433 YP_001793208.1 KEGG: mpt:Mpe_A3346 putative excinuclease ABC subunit A (DNA repair ATP-binding) ABC transporter protein; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_001793209.1 KEGG: bmu:Bmul_2476 protein of unknown function UPF0153 YP_001793210.1 TIGRFAM: yecA family protein; KEGG: bvi:Bcep1808_2979 YecA family protein YP_001793211.1 PFAM: protein of unknown function DUF45; KEGG: mpt:Mpe_A1039 hypothetical protein YP_001793212.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_001793213.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA YP_001793214.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: aav:Aave_0053 lysine exporter protein (LysE/YggA) YP_001793215.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pol:Bpro_0076 cobyrinic acid a,c-diamide synthase YP_001793216.1 PFAM: beta-lactamase domain protein; KEGG: mpt:Mpe_A3370 hypothetical protein YP_001793217.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: reh:H16_A0165 transcriptional regulator, MerR-family YP_001793218.1 PFAM: thioesterase superfamily protein; KEGG: dac:Daci_5992 thioesterase superfamily protein YP_001793219.1 PFAM: carbonic anhydrase; KEGG: mpt:Mpe_A3369 carbonate dehydratase YP_001793220.1 catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol YP_001793221.1 KEGG: mpt:Mpe_A3367 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_001793222.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rpb:RPB_4520 lysine exporter protein (LysE/YggA) YP_001793223.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rme:Rmet_0108 acyl-CoA dehydrogenase-like protein YP_001793224.1 KEGG: pna:Pnap_0003 hypothetical protein YP_001793225.1 PFAM: restriction endonuclease; KEGG: ecv:APECO1_2075 methylated adenine and cytosine restriction protein YP_001793226.1 KEGG: dar:Daro_3006 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; SMART: PAS domain containing protein YP_001793227.1 KEGG: eba:ebA226 hypothetical protein YP_001793228.1 KEGG: mfa:Mfla_1283 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001793229.1 KEGG: azo:azo3684 putative periplasmic binding protein YP_001793230.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mpt:Mpe_A1565 hypothetical protein YP_001793231.1 PFAM: Glutathione S-transferase domain; KEGG: mpt:Mpe_A1566 glutathione S-transferase YP_001793232.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: mpt:Mpe_A1567 hypothetical protein YP_001793233.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: bmu:Bmul_0155 ATPase BadF/BadG/BcrA/BcrD type YP_001793234.1 KEGG: pen:PSEEN4380 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_001793235.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: har:HEAR0106 putative TRAP-type C4-dicarboxylate transport system, periplasmic component YP_001793236.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: afw:Anae109_2923 tripartite ATP-independent periplasmic transporter DctQ component YP_001793237.1 PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pol:Bpro_4053 TRAP C4-dicarboxylate transport system permease DctM subunit YP_001793238.1 KEGG: aav:Aave_1579 hypothetical protein YP_001793239.1 PFAM: DSBA oxidoreductase; KEGG: mpt:Mpe_A3362 putative 2-hydroxychromene-2-carboxylate isomerase protein YP_001793240.1 KEGG: mpt:Mpe_A3355 hypothetical protein YP_001793241.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: mpt:Mpe_A0148 putative RNA polymerase sigma N (sigma 54) factor transcription regulator protein YP_001793242.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A0149 putative ATP-binding ABC transporter protein YP_001793243.1 TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: mpt:Mpe_A0150 OstA-like protein YP_001793244.1 PFAM: DSBA oxidoreductase; KEGG: mpt:Mpe_A0151 thiol:disulfide interchange protein YP_001793245.1 PFAM: Sporulation domain protein; KEGG: mpt:Mpe_A0152 hypothetical protein YP_001793246.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_001793247.1 PFAM: cyclic nucleotide-binding; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mpt:Mpe_A0154 serine/threonine-protein kinase YP_001793248.1 KEGG: bra:BRADO3400 conserved hypothetical protein; putative signal peptide YP_001793249.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A0307 putative transmembrane protein YP_001793250.1 PFAM: VanZ family protein; KEGG: mpt:Mpe_A0308 hypothetical protein YP_001793251.1 KEGG: pol:Bpro_0248 ferredoxin-like YP_001793252.1 KEGG: mpt:Mpe_A0310 hypothetical protein YP_001793253.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: mpt:Mpe_A0311 serine-type D-Ala-D-Ala carboxypeptidase YP_001793254.1 PFAM: aminotransferase class IV; KEGG: mpt:Mpe_A0312 putative class IV aminotransferase YP_001793255.1 PFAM: protein of unknown function DUF493; KEGG: bbr:BB0170 hypothetical protein YP_001793256.1 KEGG: pna:Pnap_1054 hypothetical protein YP_001793257.1 KEGG: vei:Veis_1576 integral membrane protein YP_001793258.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: mpt:Mpe_A3409 hypothetical protein YP_001793259.1 KEGG: jan:Jann_0111 hypothetical protein YP_001793260.1 KEGG: pna:Pnap_0435 putative lipase transmembrane protein YP_001793261.1 PFAM: nuclear protein SET; KEGG: mpt:Mpe_A0045 hypothetical protein YP_001793262.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rfr:Rfer_2352 GCN5-related N-acetyltransferase YP_001793263.1 KEGG: dac:Daci_2447 hypothetical protein YP_001793264.1 KEGG: azo:azo0658 hypothetical membrane protein YP_001793265.1 KEGG: reh:H16_B2541 hypothetical protein YP_001793266.1 PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: rfr:Rfer_2380 isocitrate dehydrogenase (NAD+) YP_001793267.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine YP_001793268.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: rfr:Rfer_2238 protein of unknown function DUF883, ElaB YP_001793269.1 KEGG: rfr:Rfer_2237 putative transmembrane protein YP_001793271.1 PFAM: protein of unknown function DUF59 YP_001793272.1 PFAM: protein of unknown function DUF59; KEGG: mag:amb1263 predicted metal-sulfur cluster biosynthetic enzyme YP_001793273.1 KEGG: rfr:Rfer_2197 ribonucleotide reductase large subunit; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit YP_001793274.1 KEGG: bch:Bcen2424_3352 PilT protein domain protein YP_001793275.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: bch:Bcen2424_3351 transcriptional regulator, AbrB family YP_001793276.1 PFAM: aldo/keto reductase; KEGG: sme:SMa0563 aldehyde or keto oxidase, probable YP_001793277.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: ent:Ent638_1703 excinuclease ABC, C subunit domain protein YP_001793278.1 KEGG: bra:BRADO0602 hypothetical protein YP_001793279.1 KEGG: rpe:RPE_4585 hypothetical protein YP_001793280.1 PFAM: protein of unknown function DUF344; KEGG: mpt:Mpe_A1572 hypothetical protein YP_001793282.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mpt:Mpe_A2069 putative HlyD family secretion protein YP_001793283.1 PFAM: protein of unknown function DUF214; KEGG: mpt:Mpe_A2068 hypothetical protein YP_001793284.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpt:Mpe_A2067 ABC-type anti-microbial peptide transporter, ATP-binding protein YP_001793285.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: dac:Daci_0733 transcriptional regulator, LysR family YP_001793286.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dac:Daci_0732 short-chain dehydrogenase/reductase SDR YP_001793287.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pol:Bpro_1455 TRAP dicarboxylate transporter, DctP subunit YP_001793288.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dac:Daci_0730 tripartite ATP-independent periplasmic transporter DctQ component YP_001793289.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dac:Daci_0729 TRAP dicarboxylate transporter, DctM subunit YP_001793290.1 PFAM: Transketolase domain protein; KEGG: pol:Bpro_1461 transketolase-like YP_001793291.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: dac:Daci_0727 transketolase central region YP_001793292.1 KEGG: eba:ebA6307 O-acetylhomoserine sulfhydrylase, gene: MetY; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_001793294.1 PFAM: Phosphoglycerate mutase; KEGG: rca:Rcas_1740 phosphohistidine phosphatase, SixA YP_001793295.1 PFAM: Extracellular ligand-binding receptor; KEGG: dac:Daci_2551 extracellular ligand-binding receptor YP_001793296.1 KEGG: pna:Pnap_3987 putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane YP_001793297.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_4100 periplasmic sensor signal transduction histidine kinase YP_001793298.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: pol:Bpro_4101 two component transcriptional regulator, LuxR family YP_001793299.1 TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: dar:Daro_0570 PhnA protein YP_001793300.1 PFAM: DTW domain containing protein; KEGG: rfr:Rfer_3956 DTW YP_001793302.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: cch:Cag_1392 putative type II DNA modification enzyme (methyltransferase) YP_001793304.1 PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: ade:Adeh_3869 type III restriction enzyme, res subunit YP_001793305.1 KEGG: pfo:Pfl_3518 hypothetical protein YP_001793307.1 KEGG: dar:Daro_0419 hypothetical protein YP_001793308.1 KEGG: rme:Rmet_2169 hypothetical protein YP_001793309.1 KEGG: pst:PSPTO_0023 hypothetical protein YP_001793310.1 PFAM: helix-turn-helix domain protein; KEGG: pst:PSPTO_0022 DNA-binding protein YP_001793311.1 KEGG: rle:pRL100468 hypothetical protein YP_001793312.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_1765 transcriptional regulator, LysR family YP_001793313.1 PFAM: conserved hypothetical protein; KEGG: dac:Daci_0295 hypothetical protein YP_001793314.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: dac:Daci_0581 transcriptional regulator, IclR family YP_001793315.1 PFAM: beta-lactamase domain protein; KEGG: pol:Bpro_4534 beta-lactamase-like YP_001793316.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: pol:Bpro_4535 hypothetical protein YP_001793317.1 KEGG: pol:Bpro_4536 hypothetical protein YP_001793318.1 An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine YP_001793319.1 KEGG: pol:Bpro_2996 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969 YP_001793320.1 PFAM: protein of unknown function DUF182; KEGG: aav:Aave_3933 protein of unknown function DUF182 YP_001793321.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rle:RL2500 putative isoquinoline 1-oxidoreductase beta subunit YP_001793322.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rle:RL2499 putative isoquinoline 1-oxidoreductase alpha subunit YP_001793323.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: pfl:PFL_2378 transcriptional regulator, AraC family YP_001793324.1 TIGRFAM: phasin family protein; PFAM: Phasin family protein; KEGG: mpt:Mpe_A1506 hypothetical protein YP_001793325.1 PFAM: pseudouridine synthase; KEGG: mms:mma_3511 RNA pseudouridylate synthase family protein YP_001793326.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: vei:Veis_3569 oxidoreductase domain protein YP_001793327.1 KEGG: rfr:Rfer_2773 hypothetical protein YP_001793328.1 KEGG: reu:Reut_B5395 probable transmembrane protein YP_001793329.1 PFAM: peptidase M12A astacin; peptidase domain protein; SMART: peptidase metallopeptidase; KEGG: fgr:FG08198.1 hypothetical protein YP_001793330.1 KEGG: mpt:Mpe_A1035 hypothetical protein YP_001793331.1 PFAM: glucose sorbosone dehydrogenase; KEGG: mpt:Mpe_A2752 glucose/sorbosone dehydrogenase YP_001793332.1 PFAM: inositol monophosphatase; KEGG: smd:Smed_3968 inositol-phosphate phosphatase YP_001793333.1 PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb20365 putative ABC transporter iron-binding protein YP_001793334.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jan:Jann_1364 binding-protein-dependent transport systems inner membrane component YP_001793335.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: oan:Oant_3843 ABC transporter related YP_001793336.1 KEGG: bxe:Bxe_B2084 beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1 YP_001793337.1 PFAM: extracellular solute-binding protein family 1; KEGG: bxe:Bxe_B2083 ABC sugar transporter, periplasmic ligand binding protein YP_001793338.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_1109 binding-protein-dependent transport systems inner membrane component YP_001793339.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2081 ABC sugar transporter, inner membrane subunit YP_001793340.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rfr:Rfer_1107 ABC transporter related YP_001793341.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rfr:Rfer_1112 transcriptional regulator, LacI family YP_001793342.1 PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: smd:Smed_2952 oxidoreductase domain protein YP_001793343.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: atc:AGR_L_982 hypothetical protein YP_001793344.1 PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: bra:BRADO0446 conserved hypothetical protein; putative xylose isomerase-like YP_001793345.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bxe:Bxe_A3671 putative oxidoreductase YP_001793346.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: ret:RHE_PF00473 beta-glucosidase protein YP_001793347.1 PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: ajs:Ajs_3664 methyl-accepting chemotaxis sensory transducer YP_001793348.1 PFAM: major facilitator superfamily MFS_1; KEGG: rle:pRL120185 putative transmembrane transporter YP_001793349.1 PFAM: RES domain protein; KEGG: nha:Nham_1974 hypothetical protein YP_001793350.1 PFAM: PilT protein domain protein; KEGG: eba:ebA3350 plasmid stability protein YP_001793351.1 KEGG: vei:Veis_3768 plasmid stability protein StbC YP_001793352.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: reu:Reut_B3694 lysine exporter protein (LysE/YggA) YP_001793353.1 PFAM: Negative transcriptional regulator; KEGG: rfr:Rfer_3387 negative transcriptional regulator YP_001793354.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bra:BRADO2304 C4-dicarboxylate transport transcriptional regulatory protein (response regulator in two-component reguatory system) YP_001793355.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bja:blr3730 two-component hybrid sensor and regulator YP_001793356.1 involved in the transport of C4-dicarboxylates across the membrane YP_001793357.1 PFAM: major facilitator superfamily MFS_1; KEGG: vei:Veis_1471 major facilitator superfamily MFS_1 YP_001793358.1 PFAM: protein of unknown function DUF81; KEGG: bpt:Bpet2726 putative integral membrane protein YP_001793359.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rme:Rmet_3629 transcriptional regulator, GntR family YP_001793360.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: rme:Rmet_3634 ornithine cyclodeaminase/mu-crystallin YP_001793361.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rme:Rmet_3629 transcriptional regulator, GntR family YP_001793362.1 PFAM: protein of unknown function DUF81; KEGG: reh:H16_B1882 hypothetical membrane spanning protein YP_001793363.1 PFAM: ferredoxin; KEGG: reh:H16_B1886 ferredoxin YP_001793364.1 KEGG: rme:Rmet_3637 hypothetical protein YP_001793365.1 PFAM: ferredoxin; KEGG: reu:Reut_B3759 ferredoxin YP_001793366.1 PFAM: TENA/THI-4 domain protein; KEGG: reu:Reut_B3762 coenzyme PQQ synthesis C YP_001793367.1 PFAM: Aldehyde Dehydrogenase_; KEGG: reu:Reut_B3763 aldehyde dehydrogenase YP_001793368.1 PFAM: protein of unknown function DUF336; KEGG: rme:Rmet_3631 protein of unknown function DUF336 YP_001793369.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: reh:H16_B1877 putative oxidoreductase YP_001793370.1 KEGG: reh:H16_B1883 hypothetical membrane spanning protein YP_001793371.1 PFAM: gamma-glutamyltranspeptidase; KEGG: tth:TTC0403 gamma-glutamyltranspeptidase YP_001793372.1 PFAM: Glutathione S-transferase domain; KEGG: pol:Bpro_2015 glutathione S-transferase-like YP_001793373.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: psa:PST_2897 probable oxidoreductase YP_001793374.1 KEGG: pna:Pnap_3261 hypothetical protein YP_001793375.1 PFAM: OmpA/MotB domain protein; KEGG: pmy:Pmen_2437 OmpA/MotB domain protein YP_001793376.1 PFAM: glutamine amidotransferase class-I; DGPFAETKE family protein; KEGG: tbd:Tbd_0876 hypothetical protein YP_001793377.1 PFAM: DGPFAETKE family protein; KEGG: mpt:Mpe_A0021 hypothetical protein YP_001793378.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mpt:Mpe_A0020 hypothetical protein YP_001793379.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bxe:Bxe_B0234 unknown sigma factor YP_001793380.1 KEGG: mpt:Mpe_B0622 hypothetical protein YP_001793381.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: cvi:CV_2841 ATP-dependent RNA helicase YP_001793382.1 KEGG: pna:Pnap_0222 putative esterase YP_001793383.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: syx:SynWH7803_0016 peptide methionine sulfoxide reductase YP_001793384.1 PFAM: AAA-4 family protein; KEGG: tbd:Tbd_1077 predicted transcriptional regulator YP_001793385.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: psa:PST_2883 oxidoreductase, short-chain dehydrogenase/reductase family YP_001793386.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: aav:Aave_0105 radical SAM domain protein YP_001793387.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: aav:Aave_3093 integral membrane sensor signal transduction histidine kinase YP_001793389.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: cvi:CV_4003 ammonium transporter YP_001793390.1 KEGG: rme:Rmet_1299 hypothetical protein YP_001793391.1 PFAM: MOSC domain containing protein; KEGG: mpt:Mpe_A3716 hypothetical protein YP_001793392.1 KEGG: mxa:MXAN_5509 hypothetical protein YP_001793393.1 PFAM: phospholipase/Carboxylesterase; KEGG: mpt:Mpe_A0054 carboxylesterase YP_001793394.1 PFAM: dienelactone hydrolase; KEGG: rso:RS04764 putative transmembrane protein YP_001793395.1 PFAM: Catalase domain protein; KEGG: mpt:Mpe_A1580 putative catalase YP_001793396.1 PFAM: Rare lipoprotein A; KEGG: mxa:MXAN_3573 putative lipoprotein YP_001793397.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: dar:Daro_2873 2-nitropropane dioxygenase, NPD YP_001793398.1 KEGG: pna:Pnap_3680 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type YP_001793399.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rfr:Rfer_3416 conserved hypothetical protein, potential methyltransferase YP_001793400.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE YP_001793401.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: mpt:Mpe_A3825 60kDa inner-membrane protein YP_001793402.1 PFAM: protein of unknown function DUF37; KEGG: dac:Daci_6057 protein of unknown function DUF37 YP_001793403.1 KEGG: mpt:Mpe_A3827 ribonuclease P protein component YP_001793404.1 PFAM: ribosomal protein L34; KEGG: pna:Pnap_4116 ribosomal protein L34