-- dump date 20250217_000357 -- class Genbank::Contig -- table contig_comment -- id comment NZ_AP014924.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to AP014924.1.REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: UnknownREFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS IIREFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,604REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,604 CDSs (total) :: 3,545REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,604 CDSs (total) :: 3,545 Genes (coding) :: 3,484REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,604 CDSs (total) :: 3,545 Genes (coding) :: 3,484 CDSs (with protein) :: 3,484REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,604 CDSs (total) :: 3,545 Genes (coding) :: 3,484 CDSs (with protein) :: 3,484 Genes (RNA) :: 59REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,604 CDSs (total) :: 3,545 Genes (coding) :: 3,484 CDSs (with protein) :: 3,484 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,604 CDSs (total) :: 3,545 Genes (coding) :: 3,484 CDSs (with protein) :: 3,484 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,604 CDSs (total) :: 3,545 Genes (coding) :: 3,484 CDSs (with protein) :: 3,484 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,604 CDSs (total) :: 3,545 Genes (coding) :: 3,484 CDSs (with protein) :: 3,484 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,604 CDSs (total) :: 3,545 Genes (coding) :: 3,484 CDSs (with protein) :: 3,484 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 61REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,604 CDSs (total) :: 3,545 Genes (coding) :: 3,484 CDSs (with protein) :: 3,484 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 61 CDSs (without protein) :: 61REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,604 CDSs (total) :: 3,545 Genes (coding) :: 3,484 CDSs (with protein) :: 3,484 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 61 CDSs (without protein) :: 61 Pseudo Genes (ambiguous residues) :: 0 of 61REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,604 CDSs (total) :: 3,545 Genes (coding) :: 3,484 CDSs (with protein) :: 3,484 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 61 CDSs (without protein) :: 61 Pseudo Genes (ambiguous residues) :: 0 of 61 Pseudo Genes (frameshifted) :: 7 of 61REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,604 CDSs (total) :: 3,545 Genes (coding) :: 3,484 CDSs (with protein) :: 3,484 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 61 CDSs (without protein) :: 61 Pseudo Genes (ambiguous residues) :: 0 of 61 Pseudo Genes (frameshifted) :: 7 of 61 Pseudo Genes (incomplete) :: 57 of 61REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,604 CDSs (total) :: 3,545 Genes (coding) :: 3,484 CDSs (with protein) :: 3,484 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 61 CDSs (without protein) :: 61 Pseudo Genes (ambiguous residues) :: 0 of 61 Pseudo Genes (frameshifted) :: 7 of 61 Pseudo Genes (incomplete) :: 57 of 61 Pseudo Genes (internal stop) :: 2 of 61REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,604 CDSs (total) :: 3,545 Genes (coding) :: 3,484 CDSs (with protein) :: 3,484 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 61 CDSs (without protein) :: 61 Pseudo Genes (ambiguous residues) :: 0 of 61 Pseudo Genes (frameshifted) :: 7 of 61 Pseudo Genes (incomplete) :: 57 of 61 Pseudo Genes (internal stop) :: 2 of 61 Pseudo Genes (multiple problems) :: 5 of 61REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,604 CDSs (total) :: 3,545 Genes (coding) :: 3,484 CDSs (with protein) :: 3,484 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 61 CDSs (without protein) :: 61 Pseudo Genes (ambiguous residues) :: 0 of 61 Pseudo Genes (frameshifted) :: 7 of 61 Pseudo Genes (incomplete) :: 57 of 61 Pseudo Genes (internal stop) :: 2 of 61 Pseudo Genes (multiple problems) :: 5 of 61 CRISPR Arrays :: 2REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,604 CDSs (total) :: 3,545 Genes (coding) :: 3,484 CDSs (with protein) :: 3,484 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 61 CDSs (without protein) :: 61 Pseudo Genes (ambiguous residues) :: 0 of 61 Pseudo Genes (frameshifted) :: 7 of 61 Pseudo Genes (incomplete) :: 57 of 61 Pseudo Genes (internal stop) :: 2 of 61 Pseudo Genes (multiple problems) :: 5 of 61 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP014924.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SMRT Analysis, v. 2.2 Genome Coverage :: Unknown Sequencing Technology :: PacBio RS II ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_001544015.1-RS_2024_12_11 Annotation Date :: 12/11/2024 12:34:03 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,604 CDSs (total) :: 3,545 Genes (coding) :: 3,484 CDSs (with protein) :: 3,484 Genes (RNA) :: 59 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 4 Pseudo Genes (total) :: 61 CDSs (without protein) :: 61 Pseudo Genes (ambiguous residues) :: 0 of 61 Pseudo Genes (frameshifted) :: 7 of 61 Pseudo Genes (incomplete) :: 57 of 61 Pseudo Genes (internal stop) :: 2 of 61 Pseudo Genes (multiple problems) :: 5 of 61 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## COMPLETENESS: full length.