-- dump date 20140619_132341 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 568819000001 SEQ_END SEQ_END NC_012488.1 2912690 2912690 DR NC_012488.1; contig end 2912690..2912690 Listeria monocytogenes serotype 4b str. CLIP 80459 YP_002756747.1 CDS dnaA NC_012488.1 319 1674 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 319..1674 Listeria monocytogenes serotype 4b str. CLIP 80459 7701635 YP_002756748.1 CDS dnaN NC_012488.1 1868 3013 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1868..3013 Listeria monocytogenes serotype 4b str. CLIP 80459 7703284 YP_002756749.1 CDS Lm4b_00003 NC_012488.1 3121 4464 D hypothetical protein 3121..4464 Listeria monocytogenes serotype 4b str. CLIP 80459 7702888 YP_002756750.1 CDS Lm4b_00004 NC_012488.1 4644 4865 D S4-like RNA binding protein 4644..4865 Listeria monocytogenes serotype 4b str. CLIP 80459 7702006 YP_002756751.1 CDS recF NC_012488.1 4869 5981 D Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 4869..5981 Listeria monocytogenes serotype 4b str. CLIP 80459 7702007 YP_002756752.1 CDS gyrB NC_012488.1 6030 7970 D DNA gyrase subunit B 6030..7970 Listeria monocytogenes serotype 4b str. CLIP 80459 7702586 YP_002756753.1 CDS gyrA NC_012488.1 8065 10593 D DNA gyrase subunit A 8065..10593 Listeria monocytogenes serotype 4b str. CLIP 80459 7702956 YP_002756754.1 CDS Lm4b_00008 NC_012488.1 10727 12241 D cardiolipin synthase 10727..12241 Listeria monocytogenes serotype 4b str. CLIP 80459 7702955 YP_002756755.1 CDS Lm4b_00009 NC_012488.1 12257 12775 D spermidine N1-acetyltransferase 12257..12775 Listeria monocytogenes serotype 4b str. CLIP 80459 7702008 YP_002756756.1 CDS Lm4b_00010 NC_012488.1 12917 13885 D mevalonate kinase 12917..13885 Listeria monocytogenes serotype 4b str. CLIP 80459 7702009 YP_002756757.1 CDS Lm4b_00011 NC_012488.1 13842 14813 D mevalonate diphosphate decarboxylase 13842..14813 Listeria monocytogenes serotype 4b str. CLIP 80459 7702010 YP_002756758.1 CDS Lm4b_00012 NC_012488.1 14794 15873 D mevalonate kinase 14794..15873 Listeria monocytogenes serotype 4b str. CLIP 80459 7702012 YP_002756759.1 CDS Lm4b_00013 NC_012488.1 16178 16837 R hypothetical protein complement(16178..16837) Listeria monocytogenes serotype 4b str. CLIP 80459 7702013 YP_002756760.1 CDS qoxA NC_012488.1 18300 19406 D AA3-600 quinol oxidase subunit II 18300..19406 Listeria monocytogenes serotype 4b str. CLIP 80459 7702016 YP_002756761.1 CDS qoxB NC_012488.1 19425 21404 D AA3-600 quinol oxidase subunit I 19425..21404 Listeria monocytogenes serotype 4b str. CLIP 80459 7702579 YP_002756762.1 CDS qoxC NC_012488.1 21392 22003 D AA3-600 quinol oxidase subunit III 21392..22003 Listeria monocytogenes serotype 4b str. CLIP 80459 7702580 YP_002756763.1 CDS qoxD NC_012488.1 22005 22337 D quinol oxidase aa3-600 chain IV 22005..22337 Listeria monocytogenes serotype 4b str. CLIP 80459 7702581 YP_002756764.1 CDS Lm4b_00020 NC_012488.1 22388 23506 R polyglutamate capsule biosynthesis protein complement(22388..23506) Listeria monocytogenes serotype 4b str. CLIP 80459 7702582 YP_002756765.1 CDS Lm4b_00021 NC_012488.1 23732 25165 D beta-glucosidase 23732..25165 Listeria monocytogenes serotype 4b str. CLIP 80459 7702017 YP_002756766.1 CDS Lm4b_00022 NC_012488.1 25212 26033 R hypothetical protein complement(25212..26033) Listeria monocytogenes serotype 4b str. CLIP 80459 7702018 YP_002756767.1 CDS Lm4b_00023 NC_012488.1 26274 27014 D GntR family transcriptional regulator 26274..27014 Listeria monocytogenes serotype 4b str. CLIP 80459 7702019 YP_002756768.1 CDS Lm4b_00024 NC_012488.1 27030 27431 D PTS system, fructose-specific IIA component 27030..27431 Listeria monocytogenes serotype 4b str. CLIP 80459 7702020 YP_002756769.1 CDS Lm4b_00025 NC_012488.1 27431 27919 D PTS system, fructose-specific IIB component 27431..27919 Listeria monocytogenes serotype 4b str. CLIP 80459 7702021 YP_002756770.1 CDS Lm4b_00026 NC_012488.1 27942 28745 D PTS system, fructose-specific IIC component 27942..28745 Listeria monocytogenes serotype 4b str. CLIP 80459 7702022 YP_002756771.1 CDS Lm4b_00027 NC_012488.1 28726 29547 D PTS system, mannose-specific IID component 28726..29547 Listeria monocytogenes serotype 4b str. CLIP 80459 7702024 YP_002756772.1 CDS Lm4b_00028 NC_012488.1 29575 30279 D hypothetical protein 29575..30279 Listeria monocytogenes serotype 4b str. CLIP 80459 7702025 YP_002756773.1 CDS Lm4b_00029 NC_012488.1 30334 30975 D copper homeostasis protein CutC 30334..30975 Listeria monocytogenes serotype 4b str. CLIP 80459 7702026 YP_002756774.1 CDS Lm4b_00030 NC_012488.1 31180 33084 D PTS system, beta-glucosides specific enzyme IIABC 31180..33084 Listeria monocytogenes serotype 4b str. CLIP 80459 7702027 YP_002756775.1 CDS Lm4b_00031 NC_012488.1 33166 34041 D microcin C7 self-immunity protein (MccF) 33166..34041 Listeria monocytogenes serotype 4b str. CLIP 80459 7702028 YP_002756776.1 CDS Lm4b_00032 NC_012488.1 34190 34810 R hypothetical protein complement(34190..34810) Listeria monocytogenes serotype 4b str. CLIP 80459 7702029 YP_002756777.1 CDS Lm4b_00033 NC_012488.1 34803 35387 R ABC transporter ATP-binding protein complement(34803..35387) Listeria monocytogenes serotype 4b str. CLIP 80459 7702030 YP_002756778.1 CDS Lm4b_00034b NC_012488.1 35447 36169 R hypothetical protein complement(35447..36169) Listeria monocytogenes serotype 4b str. CLIP 80459 7702031 YP_002756779.1 CDS Lm4b_00036 NC_012488.1 36870 37634 R hypothetical protein complement(36870..37634) Listeria monocytogenes serotype 4b str. CLIP 80459 7702034 YP_002756780.1 CDS Lm4b_00037 NC_012488.1 37705 38154 R hypothetical protein complement(37705..38154) Listeria monocytogenes serotype 4b str. CLIP 80459 7702035 YP_002756781.1 CDS Lm4b_00038 NC_012488.1 38376 38714 D hypothetical protein 38376..38714 Listeria monocytogenes serotype 4b str. CLIP 80459 7702038 YP_002756782.1 CDS Lm4b_00039 NC_012488.1 38751 39560 R hypothetical protein complement(38751..39560) Listeria monocytogenes serotype 4b str. CLIP 80459 7702039 YP_002756783.1 CDS Lm4b_00040 NC_012488.1 39577 40632 R transcription regulator LacI complement(39577..40632) Listeria monocytogenes serotype 4b str. CLIP 80459 7702040 YP_002756784.1 CDS Lm4b_00041 NC_012488.1 40834 41799 D xylose repressor and to glucokinase 40834..41799 Listeria monocytogenes serotype 4b str. CLIP 80459 7702041 YP_002756785.1 CDS Lm4b_00042 NC_012488.1 41796 44198 D endoglucanase 41796..44198 Listeria monocytogenes serotype 4b str. CLIP 80459 7702042 YP_002756786.1 CDS Lm4b_00043 NC_012488.1 44211 45569 D PTS system, cellobiose-specific IIC component 44211..45569 Listeria monocytogenes serotype 4b str. CLIP 80459 7702043 YP_002756787.1 CDS Lm4b_00044 NC_012488.1 45571 46656 D Glucosamine--fructose-6-phosphate aminotransferase (C-terminal domain) 45571..46656 Listeria monocytogenes serotype 4b str. CLIP 80459 7702044 YP_002756788.1 CDS Lm4b_00045 NC_012488.1 46888 47913 D catalyzes the formation of putrescine from carbamoyl-putrescine during agmatine degradation; putrescine carbamoyltransferase 46888..47913 Listeria monocytogenes serotype 4b str. CLIP 80459 7702045 YP_002756789.1 CDS Lm4b_00046 NC_012488.1 47986 49371 D amino acid transporter 47986..49371 Listeria monocytogenes serotype 4b str. CLIP 80459 7702046 YP_002756790.1 CDS Lm4b_00047b NC_012488.1 49358 50452 D catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis; agmatine deiminase 49358..50452 Listeria monocytogenes serotype 4b str. CLIP 80459 7702048 YP_002756791.1 CDS Lm4b_00048 NC_012488.1 50456 51406 D catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 50456..51406 Listeria monocytogenes serotype 4b str. CLIP 80459 7702050 YP_002756792.1 CDS Lm4b_00049 NC_012488.1 51507 52616 D catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis; agmatine deiminase 51507..52616 Listeria monocytogenes serotype 4b str. CLIP 80459 7702051 YP_002756793.1 CDS Lm4b_00050 NC_012488.1 52633 53412 D hypothetical protein 52633..53412 Listeria monocytogenes serotype 4b str. CLIP 80459 7702052 YP_002756794.1 CDS Lm4b_00051 NC_012488.1 53516 54175 D DedA protein 53516..54175 Listeria monocytogenes serotype 4b str. CLIP 80459 7702053 YP_002756795.1 CDS Lm4b_00052 NC_012488.1 54254 55486 D catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase 54254..55486 Listeria monocytogenes serotype 4b str. CLIP 80459 7702054 YP_002756796.1 CDS rpsF NC_012488.1 55765 56058 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 55765..56058 Listeria monocytogenes serotype 4b str. CLIP 80459 7702055 YP_002756797.1 CDS ssb NC_012488.1 56114 56650 D single-strand binding protein (SSB) 56114..56650 Listeria monocytogenes serotype 4b str. CLIP 80459 7702439 YP_002756798.1 CDS rpsR NC_012488.1 56694 56933 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 56694..56933 Listeria monocytogenes serotype 4b str. CLIP 80459 7701593 YP_002756799.1 CDS Lm4b_00056 NC_012488.1 57086 57697 D hypothetical protein 57086..57697 Listeria monocytogenes serotype 4b str. CLIP 80459 7702451 YP_002756800.1 CDS Lm4b_00057 NC_012488.1 57954 58568 D essential for production of a quorum sensing autoinducing peptide; putative accessory gene regulator protein 57954..58568 Listeria monocytogenes serotype 4b str. CLIP 80459 7702056 YP_002756801.1 CDS Lm4b_00058 NC_012488.1 58552 58713 D hypothetical protein 58552..58713 Listeria monocytogenes serotype 4b str. CLIP 80459 7702057 YP_002756802.1 CDS Lm4b_00059 NC_012488.1 58809 60104 D sensor histidine kinase 58809..60104 Listeria monocytogenes serotype 4b str. CLIP 80459 7702058 YP_002756803.1 CDS Lm4b_00060 NC_012488.1 60123 60851 D response regulator protein 60123..60851 Listeria monocytogenes serotype 4b str. CLIP 80459 7702059 YP_002756804.1 CDS Lm4b_00061 NC_012488.1 61017 62990 D YybT protein 61017..62990 Listeria monocytogenes serotype 4b str. CLIP 80459 7702060 YP_002756805.1 CDS rplI NC_012488.1 62993 63439 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 62993..63439 Listeria monocytogenes serotype 4b str. CLIP 80459 7702061 YP_002756806.1 CDS dnaC NC_012488.1 63464 64816 D unwinds double stranded DNA; replicative DNA helicase 63464..64816 Listeria monocytogenes serotype 4b str. CLIP 80459 7702406 YP_002756807.1 CDS purA NC_012488.1 65075 66367 D catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 65075..66367 Listeria monocytogenes serotype 4b str. CLIP 80459 7703286 YP_002756808.1 CDS Lm4b_00065 NC_012488.1 66670 66963 D heat shock protein 66670..66963 Listeria monocytogenes serotype 4b str. CLIP 80459 7704078 YP_002756809.1 CDS Lm4b_00066 NC_012488.1 67112 70318 D YueB protein 67112..70318 Listeria monocytogenes serotype 4b str. CLIP 80459 7702062 YP_002756810.1 CDS Lm4b_00067 NC_012488.1 70308 70823 D hypothetical protein 70308..70823 Listeria monocytogenes serotype 4b str. CLIP 80459 7702063 YP_002756811.1 CDS Lm4b_00068 NC_012488.1 70841 71092 D YukD protein 70841..71092 Listeria monocytogenes serotype 4b str. CLIP 80459 7702064 YP_002756812.1 CDS Lm4b_00069 NC_012488.1 71114 72310 D YukC protein 71114..72310 Listeria monocytogenes serotype 4b str. CLIP 80459 7702065 YP_002756813.1 CDS Lm4b_00070 NC_012488.1 72324 76820 D DNA segregation ATPase FtsK/SpoIIIE 72324..76820 Listeria monocytogenes serotype 4b str. CLIP 80459 7702066 YP_002756814.1 CDS Lm4b_00071b NC_012488.1 76826 77143 D hypothetical protein 76826..77143 Listeria monocytogenes serotype 4b str. CLIP 80459 7702068 YP_002756815.1 CDS Lm4b_00072b NC_012488.1 77133 77567 D hypothetical protein 77133..77567 Listeria monocytogenes serotype 4b str. CLIP 80459 7702070 YP_002756816.1 CDS Lm4b_00073 NC_012488.1 77579 77887 D hypothetical protein 77579..77887 Listeria monocytogenes serotype 4b str. CLIP 80459 7702071 YP_002756817.1 CDS Lm4b_00074 NC_012488.1 77906 78547 D hypothetical protein 77906..78547 Listeria monocytogenes serotype 4b str. CLIP 80459 7702072 YP_002756818.1 CDS Lm4b_00075 NC_012488.1 78559 78873 D hypothetical protein 78559..78873 Listeria monocytogenes serotype 4b str. CLIP 80459 7702073 YP_002756819.1 CDS Lm4b_00076b NC_012488.1 78870 79832 D hypothetical protein 78870..79832 Listeria monocytogenes serotype 4b str. CLIP 80459 7702075 YP_002756820.1 CDS Lm4b_00077 NC_012488.1 79936 80271 D hypothetical protein 79936..80271 Listeria monocytogenes serotype 4b str. CLIP 80459 7702076 YP_002756821.1 CDS Lm4b_00078 NC_012488.1 80305 80745 D hypothetical protein 80305..80745 Listeria monocytogenes serotype 4b str. CLIP 80459 7702077 YP_002756822.1 CDS Lm4b_00079 NC_012488.1 81308 81904 D hypothetical protein 81308..81904 Listeria monocytogenes serotype 4b str. CLIP 80459 7701855 YP_002756823.1 CDS Lm4b_00081 NC_012488.1 82925 83698 D carboxyphosphonoenolpyruvate phosphonomutase 82925..83698 Listeria monocytogenes serotype 4b str. CLIP 80459 7701719 YP_002756824.1 CDS Lm4b_00082 NC_012488.1 83695 84747 D Ada protein (O6-methylguanine-DNA methyltransferase) 83695..84747 Listeria monocytogenes serotype 4b str. CLIP 80459 7701720 YP_002756825.1 CDS Lm4b_00083 NC_012488.1 84769 85407 R hypothetical protein complement(84769..85407) Listeria monocytogenes serotype 4b str. CLIP 80459 7701721 YP_002756826.1 CDS Lm4b_00084 NC_012488.1 85538 86494 D phosphoglycerate dehydrogenase 85538..86494 Listeria monocytogenes serotype 4b str. CLIP 80459 7701722 YP_002756827.1 CDS Lm4b_00085 NC_012488.1 87028 87369 D hypothetical protein 87028..87369 Listeria monocytogenes serotype 4b str. CLIP 80459 7703430 YP_002756828.1 CDS Lm4b_00086 NC_012488.1 87436 87804 R transcription regulator merR complement(87436..87804) Listeria monocytogenes serotype 4b str. CLIP 80459 7701724 YP_002756829.1 CDS Lm4b_00087 NC_012488.1 87860 88843 R oxidoreductase complement(87860..88843) Listeria monocytogenes serotype 4b str. CLIP 80459 7701725 YP_002756830.1 CDS Lm4b_00088 NC_012488.1 89234 89923 D hypothetical protein 89234..89923 Listeria monocytogenes serotype 4b str. CLIP 80459 7701726 YP_002756831.1 CDS Lm4b_00089 NC_012488.1 90000 95879 D hypothetical protein 90000..95879 Listeria monocytogenes serotype 4b str. CLIP 80459 7701727 YP_002756832.1 CDS Lm4b_00090 NC_012488.1 95876 98185 D hypothetical protein 95876..98185 Listeria monocytogenes serotype 4b str. CLIP 80459 7701728 YP_002756833.1 CDS Lm4b_00091 NC_012488.1 98242 98484 D ATP synthase C chain 98242..98484 Listeria monocytogenes serotype 4b str. CLIP 80459 7701729 YP_002756834.1 CDS Lm4b_00092 NC_012488.1 98496 99527 D ATP synthase delta chain 98496..99527 Listeria monocytogenes serotype 4b str. CLIP 80459 7701730 YP_002756835.1 CDS Lm4b_00093 NC_012488.1 99524 101020 D produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 99524..101020 Listeria monocytogenes serotype 4b str. CLIP 80459 7701731 YP_002756836.1 CDS Lm4b_00094 NC_012488.1 101017 101886 D ATP synthase gamma chain 101017..101886 Listeria monocytogenes serotype 4b str. CLIP 80459 7701733 YP_002756837.1 CDS Lm4b_00095 NC_012488.1 101887 103257 D produces ATP from ADP in the presence of a proton gradient across the membrane; the beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 101887..103257 Listeria monocytogenes serotype 4b str. CLIP 80459 7701734 YP_002756838.1 CDS Lm4b_00096 NC_012488.1 103270 103602 D ATP synthase epsilon chain 103270..103602 Listeria monocytogenes serotype 4b str. CLIP 80459 7701735 YP_002756839.1 CDS Lm4b_00097b NC_012488.1 103583 104143 D hypothetical protein 103583..104143 Listeria monocytogenes serotype 4b str. CLIP 80459 7701737 YP_002756840.1 CDS Lm4b_00098 NC_012488.1 104318 104950 D hypothetical protein 104318..104950 Listeria monocytogenes serotype 4b str. CLIP 80459 7701738 YP_002756841.1 CDS Lm4b_00099 NC_012488.1 105248 106213 D PTS system mannose-specific, IIAB component 105248..106213 Listeria monocytogenes serotype 4b str. CLIP 80459 7701739 YP_002756842.1 CDS Lm4b_00100 NC_012488.1 106237 107043 D PTS system mannose-specific, IIC component 106237..107043 Listeria monocytogenes serotype 4b str. CLIP 80459 7701740 YP_002756843.1 CDS Lm4b_00101 NC_012488.1 107065 107976 D PTS system mannose-specific, IID component 107065..107976 Listeria monocytogenes serotype 4b str. CLIP 80459 7701741 YP_002756844.1 CDS Lm4b_00102 NC_012488.1 108104 108493 D hypothetical protein 108104..108493 Listeria monocytogenes serotype 4b str. CLIP 80459 7701742 YP_002756845.1 CDS Lm4b_00103 NC_012488.1 108615 108965 D hypothetical protein 108615..108965 Listeria monocytogenes serotype 4b str. CLIP 80459 7701743 YP_002756846.1 CDS Lm4b_00104 NC_012488.1 109006 110523 R hypothetical protein complement(109006..110523) Listeria monocytogenes serotype 4b str. CLIP 80459 7701744 YP_002756847.1 CDS Lm4b_00105 NC_012488.1 110638 110931 R transcription regulator (ArsR family) complement(110638..110931) Listeria monocytogenes serotype 4b str. CLIP 80459 7701745 YP_002756848.1 CDS Lm4b_00106 NC_012488.1 111043 111333 D hypothetical protein 111043..111333 Listeria monocytogenes serotype 4b str. CLIP 80459 7701746 YP_002756849.1 CDS Lm4b_00107 NC_012488.1 111347 111979 D NADH oxidase 111347..111979 Listeria monocytogenes serotype 4b str. CLIP 80459 7701747 YP_002756850.1 CDS Lm4b_00108 NC_012488.1 112075 112446 D hypothetical protein 112075..112446 Listeria monocytogenes serotype 4b str. CLIP 80459 7701748 YP_002756851.1 CDS Lm4b_00109 NC_012488.1 112737 115007 D chitinase B 112737..115007 Listeria monocytogenes serotype 4b str. CLIP 80459 7701749 YP_002756852.1 CDS Lm4b_00110 NC_012488.1 115110 116012 D transcription regulator 115110..116012 Listeria monocytogenes serotype 4b str. CLIP 80459 7701750 YP_002756853.1 CDS Lm4b_00111 NC_012488.1 116037 117818 R ABC transporter ATP-binding protein complement(116037..117818) Listeria monocytogenes serotype 4b str. CLIP 80459 7701751 YP_002756854.1 CDS Lm4b_00112 NC_012488.1 117811 119553 R ABC transporter ATP-binding protein complement(117811..119553) Listeria monocytogenes serotype 4b str. CLIP 80459 7701752 YP_002756855.1 CDS Lm4b_00113 NC_012488.1 119696 120529 D AraC family transcriptional regulator 119696..120529 Listeria monocytogenes serotype 4b str. CLIP 80459 7701753 YP_002756856.1 CDS Lm4b_00114 NC_012488.1 120564 121679 D lipase 120564..121679 Listeria monocytogenes serotype 4b str. CLIP 80459 7701754 YP_002756857.1 CDS Lm4b_00115 NC_012488.1 121795 122493 D hypothetical protein 121795..122493 Listeria monocytogenes serotype 4b str. CLIP 80459 7701755 YP_002756858.1 CDS Lm4b_00116 NC_012488.1 122463 123158 R transcription regulator, Fnr/Crp family complement(122463..123158) Listeria monocytogenes serotype 4b str. CLIP 80459 7701756 YP_002756859.1 CDS Lm4b_00117b NC_012488.1 123377 123829 R protein gp35 from Bacteriophage A118 complement(123377..123829) Listeria monocytogenes serotype 4b str. CLIP 80459 7701757 YP_002756860.1 CDS Lm4b_00118 NC_012488.1 123835 124170 R repressor C1 from lactococcal bacteriophage Tuc2009 complement(123835..124170) Listeria monocytogenes serotype 4b str. CLIP 80459 7701758 YP_002756861.1 CDS lmaD NC_012488.1 124387 124815 D Antigen D 124387..124815 Listeria monocytogenes serotype 4b str. CLIP 80459 7701759 YP_002756862.1 CDS lmaC NC_012488.1 124827 125243 D Antigen C 124827..125243 Listeria monocytogenes serotype 4b str. CLIP 80459 7702539 YP_002756863.1 CDS lmaB NC_012488.1 125523 125912 D antigen B 125523..125912 Listeria monocytogenes serotype 4b str. CLIP 80459 7702538 YP_002756864.1 CDS lmaA NC_012488.1 125925 126437 D antigen A 125925..126437 Listeria monocytogenes serotype 4b str. CLIP 80459 7702537 YP_002756865.1 CDS Lm4b_00123 NC_012488.1 126485 126787 D hypothetical protein 126485..126787 Listeria monocytogenes serotype 4b str. CLIP 80459 7702536 YP_002756866.1 CDS Lm4b_00124 NC_012488.1 126829 127233 D hypothetical protein 126829..127233 Listeria monocytogenes serotype 4b str. CLIP 80459 7701761 YP_002756867.1 CDS Lm4b_00125 NC_012488.1 127220 129088 D bacteriophage minor tail proteins 127220..129088 Listeria monocytogenes serotype 4b str. CLIP 80459 7701762 YP_002756868.1 CDS Lm4b_00126 NC_012488.1 129085 129903 D phage protein 129085..129903 Listeria monocytogenes serotype 4b str. CLIP 80459 7701763 YP_002756869.1 CDS Lm4b_00127 NC_012488.1 129913 131049 D protein gp18 from Bacteriophage A118 129913..131049 Listeria monocytogenes serotype 4b str. CLIP 80459 7701764 YP_002756870.1 CDS Lm4b_00128 NC_012488.1 131039 131338 D hypothetical protein 131039..131338 Listeria monocytogenes serotype 4b str. CLIP 80459 7701765 YP_002756871.1 CDS Lm4b_00129 NC_012488.1 131353 131928 D hypothetical protein 131353..131928 Listeria monocytogenes serotype 4b str. CLIP 80459 7701766 YP_002756872.1 CDS Lm4b_00130 NC_012488.1 131943 132422 D hypothetical protein 131943..132422 Listeria monocytogenes serotype 4b str. CLIP 80459 7701767 YP_002756873.1 CDS Lm4b_00131 NC_012488.1 132419 132955 D protein gp20 from Bacteriophage A118 132419..132955 Listeria monocytogenes serotype 4b str. CLIP 80459 7701768 YP_002756874.1 CDS Lm4b_00132 NC_012488.1 132974 133396 D a protein from Bacteriophage phi-105 (ORF 45) 132974..133396 Listeria monocytogenes serotype 4b str. CLIP 80459 7701769 YP_002756875.1 CDS Lm4b_00133 NC_012488.1 133377 134105 D autolysin: N-acetylmuramoyl-L-alanine amidase 133377..134105 Listeria monocytogenes serotype 4b str. CLIP 80459 7701770 YP_002756876.1 CDS Lm4b_00134 NC_012488.1 134143 136497 R 5'-nucleotidase complement(134143..136497) Listeria monocytogenes serotype 4b str. CLIP 80459 7701771 YP_002756877.1 CDS Lm4b_00135 NC_012488.1 136685 137434 D hypothetical protein 136685..137434 Listeria monocytogenes serotype 4b str. CLIP 80459 7701772 YP_002756878.1 CDS Lm4b_00136 NC_012488.1 137504 139012 R catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5-monophosphate dehydrogenase complement(137504..139012) Listeria monocytogenes serotype 4b str. CLIP 80459 7701773 YP_002756879.1 CDS Lm4b_00137 NC_012488.1 139179 139412 D YjdI protein 139179..139412 Listeria monocytogenes serotype 4b str. CLIP 80459 7704176 YP_002756880.1 CDS Lm4b_00138 NC_012488.1 139424 139702 D YjdJ protein 139424..139702 Listeria monocytogenes serotype 4b str. CLIP 80459 7704177 YP_002756881.1 CDS Lm4b_00139 NC_012488.1 140028 141602 D oligopeptide ABC transport system substrate-binding proteins 140028..141602 Listeria monocytogenes serotype 4b str. CLIP 80459 7704178 YP_002756882.1 CDS Lm4b_00140 NC_012488.1 141704 142654 D peptide ABC transporter permease 141704..142654 Listeria monocytogenes serotype 4b str. CLIP 80459 7704179 YP_002756883.1 CDS Lm4b_00141 NC_012488.1 142665 143558 D peptide ABC transporter permease 142665..143558 Listeria monocytogenes serotype 4b str. CLIP 80459 7704180 YP_002756884.1 CDS Lm4b_00142 NC_012488.1 143759 144043 D hypothetical protein 143759..144043 Listeria monocytogenes serotype 4b str. CLIP 80459 7704181 YP_002756885.1 CDS Lm4b_00143 NC_012488.1 144044 144412 D hypothetical protein 144044..144412 Listeria monocytogenes serotype 4b str. CLIP 80459 7704182 YP_002756886.1 CDS Lm4b_00144 NC_012488.1 144409 145713 D hypothetical protein 144409..145713 Listeria monocytogenes serotype 4b str. CLIP 80459 7704184 YP_002756887.1 CDS Lm4b_00145 NC_012488.1 145723 145965 D hypothetical protein 145723..145965 Listeria monocytogenes serotype 4b str. CLIP 80459 7704185 YP_002756888.1 CDS Lm4b_00146 NC_012488.1 145986 146429 D hypothetical protein 145986..146429 Listeria monocytogenes serotype 4b str. CLIP 80459 7704186 YP_002756889.1 CDS Lm4b_00147 NC_012488.1 146661 146897 D hypothetical protein 146661..146897 Listeria monocytogenes serotype 4b str. CLIP 80459 7704187 YP_002756890.1 CDS Lm4b_00148 NC_012488.1 146930 147136 D hypothetical protein 146930..147136 Listeria monocytogenes serotype 4b str. CLIP 80459 7704188 YP_002756891.1 CDS Lm4b_00149 NC_012488.1 147224 147571 D hypothetical protein 147224..147571 Listeria monocytogenes serotype 4b str. CLIP 80459 7704189 YP_002756892.1 CDS Lm4b_00151b NC_012488.1 148520 148876 D hypothetical protein 148520..148876 Listeria monocytogenes serotype 4b str. CLIP 80459 7704192 YP_002756893.1 CDS Lm4b_00152 NC_012488.1 149162 150817 R oligopeptide ABC transporter-binding protein complement(149162..150817) Listeria monocytogenes serotype 4b str. CLIP 80459 7704193 YP_002756894.1 CDS Lm4b_00153 NC_012488.1 151040 151981 D zinc ABC transporter substrate-binding protein 151040..151981 Listeria monocytogenes serotype 4b str. CLIP 80459 7704194 YP_002756895.1 CDS Lm4b_00154 NC_012488.1 151994 152698 D high-affinity zinc ABC transporter (ATP-binding protein) 151994..152698 Listeria monocytogenes serotype 4b str. CLIP 80459 7704195 YP_002756896.1 CDS Lm4b_00155 NC_012488.1 152647 153453 D high-affinity zinc ABC transporter (membrane protein) 152647..153453 Listeria monocytogenes serotype 4b str. CLIP 80459 7704196 YP_002756897.1 CDS Lm4b_00156 NC_012488.1 153457 154137 R hypothetical protein complement(153457..154137) Listeria monocytogenes serotype 4b str. CLIP 80459 7704197 YP_002756898.1 CDS Lm4b_00157 NC_012488.1 154415 156754 D ATP dependent helicase 154415..156754 Listeria monocytogenes serotype 4b str. CLIP 80459 7704198 YP_002756899.1 CDS Lm4b_00158 NC_012488.1 156799 157611 D hypothetical protein 156799..157611 Listeria monocytogenes serotype 4b str. CLIP 80459 7704199 YP_002756900.1 CDS Lm4b_00159 NC_012488.1 157896 159995 D peptidoglycan bound protein (LPXTG motif) 157896..159995 Listeria monocytogenes serotype 4b str. CLIP 80459 7702241 YP_002756901.1 CDS Lm4b_00162 NC_012488.1 161988 162824 R hypothetical protein complement(161988..162824) Listeria monocytogenes serotype 4b str. CLIP 80459 7703610 YP_002756902.1 CDS Lm4b_00163 NC_012488.1 163041 164033 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 163041..164033 Listeria monocytogenes serotype 4b str. CLIP 80459 7703611 YP_002756903.1 CDS Lm4b_00164 NC_012488.1 164039 164872 D hypothetical protein 164039..164872 Listeria monocytogenes serotype 4b str. CLIP 80459 7703612 YP_002756904.1 CDS Lm4b_00165 NC_012488.1 164883 165272 D in Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation; interacts with DnaN and DnaA; DNA replication intiation control protein YabA 164883..165272 Listeria monocytogenes serotype 4b str. CLIP 80459 7703613 YP_002756905.1 CDS Lm4b_00166 NC_012488.1 165309 166082 D hypothetical protein 165309..166082 Listeria monocytogenes serotype 4b str. CLIP 80459 7703614 YP_002756906.1 CDS Lm4b_00167 NC_012488.1 166066 166335 D GIY-YIG nuclease superfamily protein 166066..166335 Listeria monocytogenes serotype 4b str. CLIP 80459 7703615 YP_002756907.1 CDS Lm4b_00168 NC_012488.1 166332 167213 D hypothetical protein 166332..167213 Listeria monocytogenes serotype 4b str. CLIP 80459 7703616 YP_002756908.1 CDS Lm4b_00169 NC_012488.1 167258 167542 R transcription regulatory protein AbrB complement(167258..167542) Listeria monocytogenes serotype 4b str. CLIP 80459 7703617 YP_002756909.1 CDS Lm4b_00170 NC_012488.1 167656 168513 D a glucose uptake protein 167656..168513 Listeria monocytogenes serotype 4b str. CLIP 80459 7703618 YP_002756910.1 CDS Lm4b_00171 NC_012488.1 168575 169843 D hypothetical protein 168575..169843 Listeria monocytogenes serotype 4b str. CLIP 80459 7703619 YP_002756911.1 CDS Lm4b_00172 NC_012488.1 169991 171256 R peptidoglycan bound protein (LPXTG motif) complement(169991..171256) Listeria monocytogenes serotype 4b str. CLIP 80459 7703620 YP_002756912.1 CDS Lm4b_00173 NC_012488.1 171534 172394 D glucose uptake protein 171534..172394 Listeria monocytogenes serotype 4b str. CLIP 80459 7703621 YP_002756913.1 CDS metS NC_012488.1 172466 174460 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 172466..174460 Listeria monocytogenes serotype 4b str. CLIP 80459 7703622 YP_002756914.1 CDS Lm4b_00175 NC_012488.1 174624 175838 D xylose repressor 174624..175838 Listeria monocytogenes serotype 4b str. CLIP 80459 7702554 YP_002756915.1 CDS Lm4b_00176 NC_012488.1 175874 176752 D sugar ABC transporter permease 175874..176752 Listeria monocytogenes serotype 4b str. CLIP 80459 7703623 YP_002756916.1 CDS Lm4b_00177 NC_012488.1 176752 177600 D sugar ABC transporter permease 176752..177600 Listeria monocytogenes serotype 4b str. CLIP 80459 7703624 YP_002756917.1 CDS Lm4b_00178 NC_012488.1 177628 178884 D sugar ABC transporter substrate-binding protein 177628..178884 Listeria monocytogenes serotype 4b str. CLIP 80459 7703625 YP_002756918.1 CDS Lm4b_00179 NC_012488.1 178967 182269 D alpha-xylosidase and alpha-glucosidase 178967..182269 Listeria monocytogenes serotype 4b str. CLIP 80459 7703626 YP_002756919.1 CDS Lm4b_00180 NC_012488.1 182272 184563 D alpha-glucosidase 182272..184563 Listeria monocytogenes serotype 4b str. CLIP 80459 7703627 YP_002756920.1 CDS Lm4b_00181 NC_012488.1 184567 186228 D oligo-1,6-glucosidase 184567..186228 Listeria monocytogenes serotype 4b str. CLIP 80459 7703628 YP_002756921.1 CDS Lm4b_00182 NC_012488.1 186325 187098 D hypothetical protein 186325..187098 Listeria monocytogenes serotype 4b str. CLIP 80459 7703629 YP_002756922.1 CDS Lm4b_00183 NC_012488.1 187390 188604 D YabE protein 187390..188604 Listeria monocytogenes serotype 4b str. CLIP 80459 7703630 YP_002756923.1 CDS Lm4b_00184 NC_012488.1 188706 189281 D YabF protein 188706..189281 Listeria monocytogenes serotype 4b str. CLIP 80459 7703631 YP_002756924.1 CDS ksgA NC_012488.1 189274 190161 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 189274..190161 Listeria monocytogenes serotype 4b str. CLIP 80459 7703632 YP_002756925.1 CDS Lm4b_00186 NC_012488.1 190281 190538 D Veg protein 190281..190538 Listeria monocytogenes serotype 4b str. CLIP 80459 7702523 YP_002756926.1 CDS ipk NC_012488.1 190677 191558 D An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 190677..191558 Listeria monocytogenes serotype 4b str. CLIP 80459 7703633 YP_002756927.1 CDS Lm4b_00188 NC_012488.1 191580 192317 D phospho-beta-glucosidase 191580..192317 Listeria monocytogenes serotype 4b str. CLIP 80459 7703634 YP_002756928.1 CDS Lm4b_00189 NC_012488.1 192481 193299 D pur operon repressor 192481..193299 Listeria monocytogenes serotype 4b str. CLIP 80459 7703635 YP_002756929.1 CDS Lm4b_00190 NC_012488.1 193476 194153 D hypothetical protein 193476..194153 Listeria monocytogenes serotype 4b str. CLIP 80459 7703636 YP_002756930.1 CDS Lm4b_00191 NC_012488.1 194202 194894 D ABC transporter ATP-binding protein 194202..194894 Listeria monocytogenes serotype 4b str. CLIP 80459 7703637 YP_002756931.1 CDS Lm4b_00192 NC_012488.1 194891 196099 D membrane protein (ABC transporter component) 194891..196099 Listeria monocytogenes serotype 4b str. CLIP 80459 7703638 YP_002756932.1 CDS Lm4b_00193 NC_012488.1 196780 197088 D stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus; regulatory protein SpoVG 196780..197088 Listeria monocytogenes serotype 4b str. CLIP 80459 7703639 YP_002756933.1 CDS Lm4b_00194 NC_012488.1 197207 197515 D stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus; regulatory protein SpoVG 197207..197515 Listeria monocytogenes serotype 4b str. CLIP 80459 7703640 YP_002756934.1 CDS glmU NC_012488.1 197902 199275 D forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 197902..199275 Listeria monocytogenes serotype 4b str. CLIP 80459 7703641 YP_002756935.1 CDS prs NC_012488.1 199326 200282 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 199326..200282 Listeria monocytogenes serotype 4b str. CLIP 80459 7702932 YP_002756936.1 CDS prfA NC_012488.1 200326 201039 R listeriolysin positive regulatory protein complement(200326..201039) Listeria monocytogenes serotype 4b str. CLIP 80459 7704073 YP_002756937.1 CDS plcA NC_012488.1 201312 202265 R phosphatidylinositol-specific phospholipase c complement(201312..202265) Listeria monocytogenes serotype 4b str. CLIP 80459 7704067 YP_002756938.1 CDS hly NC_012488.1 202508 204097 D listeriolysin O precursor 202508..204097 Listeria monocytogenes serotype 4b str. CLIP 80459 7704059 YP_002756939.1 CDS mpl NC_012488.1 204432 205964 D Zinc metalloproteinase precursor 204432..205964 Listeria monocytogenes serotype 4b str. CLIP 80459 7702498 YP_002756940.1 CDS actA NC_012488.1 206164 207978 D actin-assembly inducing protein precursor 206164..207978 Listeria monocytogenes serotype 4b str. CLIP 80459 7702561 YP_002756941.1 CDS plcB NC_012488.1 208014 208883 D phospholipase C 208014..208883 Listeria monocytogenes serotype 4b str. CLIP 80459 7704359 YP_002756942.1 CDS Lm4b_00204 NC_012488.1 208955 209278 D hypothetical protein 208955..209278 Listeria monocytogenes serotype 4b str. CLIP 80459 7704060 YP_002756943.1 CDS Lm4b_00205 NC_012488.1 209411 209872 D putative lipoprotein 209411..209872 Listeria monocytogenes serotype 4b str. CLIP 80459 7703642 YP_002756944.1 CDS Lm4b_00206 NC_012488.1 209925 210257 R hypothetical protein complement(209925..210257) Listeria monocytogenes serotype 4b str. CLIP 80459 7703643 YP_002756945.1 CDS Lm4b_00207 NC_012488.1 210324 >210998 R hypothetical protein complement(210324..>210998) Listeria monocytogenes serotype 4b str. CLIP 80459 7703644 YP_002756946.1 CDS ldh NC_012488.1 211076 212017 R Converts (S)-lactate and NAD(+) to pyruvate and NADH; L-lactate dehydrogenase complement(211076..212017) Listeria monocytogenes serotype 4b str. CLIP 80459 7703645 YP_002756947.1 CDS ctc NC_012488.1 212311 212934 D the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 212311..212934 Listeria monocytogenes serotype 4b str. CLIP 80459 7702524 YP_002756948.1 CDS Lm4b_00210 NC_012488.1 213024 213608 D hypothetical protein 213024..213608 Listeria monocytogenes serotype 4b str. CLIP 80459 7703264 YP_002756949.1 CDS pth NC_012488.1 213715 214275 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 213715..214275 Listeria monocytogenes serotype 4b str. CLIP 80459 7703646 YP_002756950.1 CDS mfd NC_012488.1 214389 217928 D transcription-repair coupling factor 214389..217928 Listeria monocytogenes serotype 4b str. CLIP 80459 7704076 YP_002756951.1 CDS Lm4b_00213 NC_012488.1 217959 219548 D Conserved membrane-spanning protein 217959..219548 Listeria monocytogenes serotype 4b str. CLIP 80459 7702555 YP_002756952.1 CDS Lm4b_00214 NC_012488.1 219572 219850 D YabO protein 219572..219850 Listeria monocytogenes serotype 4b str. CLIP 80459 7703647 YP_002756953.1 CDS Lm4b_00215 NC_012488.1 220079 220465 D DivIC protein 220079..220465 Listeria monocytogenes serotype 4b str. CLIP 80459 7703648 YP_002756954.1 CDS Lm4b_00216 NC_012488.1 220616 221044 D hypothetical protein 220616..221044 Listeria monocytogenes serotype 4b str. CLIP 80459 7703649 YP_002756955.1 CDS Lm4b_00217 NC_012488.1 221151 223097 D hypothetical protein 221151..223097 Listeria monocytogenes serotype 4b str. CLIP 80459 7703650 YP_002756956.1 CDS ftsH NC_012488.1 223443 225530 D cell division protein ftsH 223443..225530 Listeria monocytogenes serotype 4b str. CLIP 80459 7703651 YP_002756957.1 CDS Lm4b_00219 NC_012488.1 225646 226425 D type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 225646..226425 Listeria monocytogenes serotype 4b str. CLIP 80459 7702917 YP_002756958.1 CDS hslO NC_012488.1 226441 227325 D becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 226441..227325 Listeria monocytogenes serotype 4b str. CLIP 80459 7703652 YP_002756959.1 CDS cysK NC_012488.1 227441 228367 D cysteine synthase 227441..228367 Listeria monocytogenes serotype 4b str. CLIP 80459 7703653 YP_002756960.1 CDS sul NC_012488.1 229271 230086 D dihydropteroate synthase 229271..230086 Listeria monocytogenes serotype 4b str. CLIP 80459 7703270 YP_002756961.1 CDS folA NC_012488.1 230100 230474 D dihydroneopterin aldolase 230100..230474 Listeria monocytogenes serotype 4b str. CLIP 80459 7701594 YP_002756962.1 CDS folK NC_012488.1 230467 230946 D 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase 230467..230946 Listeria monocytogenes serotype 4b str. CLIP 80459 7702907 YP_002756963.1 CDS Lm4b_00225 NC_012488.1 231022 232017 D hypothetical protein 231022..232017 Listeria monocytogenes serotype 4b str. CLIP 80459 7702910 YP_002756964.1 CDS lysS NC_012488.1 232132 233628 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 232132..233628 Listeria monocytogenes serotype 4b str. CLIP 80459 7703654 YP_002756965.1 CDS Lm4b_00249 NC_012488.1 245160 245618 D transcription repressor of class III stress genes (CtsR) 245160..245618 Listeria monocytogenes serotype 4b str. CLIP 80459 7702468 YP_002756966.1 CDS Lm4b_00250 NC_012488.1 245631 246149 D YacH protein 245631..246149 Listeria monocytogenes serotype 4b str. CLIP 80459 7703655 YP_002756967.1 CDS Lm4b_00251 NC_012488.1 246146 247168 D ATP:guanido phosphotransferase 246146..247168 Listeria monocytogenes serotype 4b str. CLIP 80459 7703656 YP_002756968.1 CDS clpC NC_012488.1 247197 249659 D endopeptidase Clp ATP-binding chain C 247197..249659 Listeria monocytogenes serotype 4b str. CLIP 80459 7703657 YP_002756969.1 CDS Lm4b_00253 NC_012488.1 249806 251179 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 249806..251179 Listeria monocytogenes serotype 4b str. CLIP 80459 7703240 YP_002756970.1 CDS Lm4b_00254 NC_012488.1 251312 252385 D YacL protein 251312..252385 Listeria monocytogenes serotype 4b str. CLIP 80459 7703658 YP_002756971.1 CDS Lm4b_00255 NC_012488.1 252405 253103 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 252405..253103 Listeria monocytogenes serotype 4b str. CLIP 80459 7703659 YP_002756972.1 CDS ispF NC_012488.1 253096 253569 D catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 253096..253569 Listeria monocytogenes serotype 4b str. CLIP 80459 7703660 YP_002756973.1 CDS gltX NC_012488.1 253588 255063 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 253588..255063 Listeria monocytogenes serotype 4b str. CLIP 80459 7703661 YP_002756974.1 CDS cysE NC_012488.1 255462 256076 D serine O-acetyltransferase 255462..256076 Listeria monocytogenes serotype 4b str. CLIP 80459 7702943 YP_002756975.1 CDS cysS NC_012488.1 256083 257498 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 256083..257498 Listeria monocytogenes serotype 4b str. CLIP 80459 7703269 YP_002756976.1 CDS Lm4b_00260 NC_012488.1 257502 257912 D YazC protein 257502..257912 Listeria monocytogenes serotype 4b str. CLIP 80459 7703271 YP_002756977.1 CDS Lm4b_00261 NC_012488.1 257912 258667 D hypothetical protein 257912..258667 Listeria monocytogenes serotype 4b str. CLIP 80459 7703663 YP_002756978.1 CDS Lm4b_00262 NC_012488.1 258670 259182 D Yacp protein 258670..259182 Listeria monocytogenes serotype 4b str. CLIP 80459 7703664 YP_002756979.1 CDS sigH NC_012488.1 259263 259868 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 259263..259868 Listeria monocytogenes serotype 4b str. CLIP 80459 7703665 YP_002756980.1 CDS secE NC_012488.1 260141 260320 D forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 260141..260320 Listeria monocytogenes serotype 4b str. CLIP 80459 7701586 YP_002756981.1 CDS nusG NC_012488.1 260450 260983 D Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 260450..260983 Listeria monocytogenes serotype 4b str. CLIP 80459 7701580 YP_002756982.1 CDS Lm4b_00267 NC_012488.1 261038 261508 D hypothetical protein 261038..261508 Listeria monocytogenes serotype 4b str. CLIP 80459 7704025 YP_002756983.1 CDS rplK NC_012488.1 261635 262060 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 261635..262060 Listeria monocytogenes serotype 4b str. CLIP 80459 7703666 YP_002756984.1 CDS rplA NC_012488.1 262100 262789 D in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 262100..262789 Listeria monocytogenes serotype 4b str. CLIP 80459 7702408 YP_002756985.1 CDS rplJ NC_012488.1 263037 263537 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 263037..263537 Listeria monocytogenes serotype 4b str. CLIP 80459 7702600 YP_002756986.1 CDS rplL NC_012488.1 263616 263978 D present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 263616..263978 Listeria monocytogenes serotype 4b str. CLIP 80459 7702407 YP_002756987.1 CDS Lm4b_00272 NC_012488.1 264121 264726 D hypothetical protein 264121..264726 Listeria monocytogenes serotype 4b str. CLIP 80459 7702409 YP_002756988.1 CDS Lm4b_00273 NC_012488.1 265073 266251 D hypothetical protein 265073..266251 Listeria monocytogenes serotype 4b str. CLIP 80459 7703667 YP_002756989.1 CDS Lm4b_00274 NC_012488.1 266396 267391 D transcription regulator, lacI family 266396..267391 Listeria monocytogenes serotype 4b str. CLIP 80459 7703668 YP_002756990.1 CDS Lm4b_00275 NC_012488.1 267529 268755 D maltose/maltodextrin ABC transporter (binding protein) 267529..268755 Listeria monocytogenes serotype 4b str. CLIP 80459 7703669 YP_002756991.1 CDS Lm4b_00276 NC_012488.1 268773 270110 D maltose/maltodextrin ABC transport system (permease) 268773..270110 Listeria monocytogenes serotype 4b str. CLIP 80459 7703670 YP_002756992.1 CDS Lm4b_00277b NC_012488.1 270112 270942 D maltose/maltodextrin ABC transport system (permease) 270112..270942 Listeria monocytogenes serotype 4b str. CLIP 80459 7703672 YP_002756993.1 CDS Lm4b_00278 NC_012488.1 270957 272654 D exo-alpha-1,4-glucosidase 270957..272654 Listeria monocytogenes serotype 4b str. CLIP 80459 7703673 YP_002756994.1 CDS Lm4b_00279 NC_012488.1 272655 274097 D Sucrose phosphorylase 272655..274097 Listeria monocytogenes serotype 4b str. CLIP 80459 7703675 YP_002756995.1 CDS Lm4b_00280 NC_012488.1 274163 274408 D hypothetical protein 274163..274408 Listeria monocytogenes serotype 4b str. CLIP 80459 7703676 YP_002756996.1 CDS rpoB NC_012488.1 274654 278208 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 274654..278208 Listeria monocytogenes serotype 4b str. CLIP 80459 7703677 YP_002756997.1 CDS rpoC NC_012488.1 278379 281984 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 278379..281984 Listeria monocytogenes serotype 4b str. CLIP 80459 7702432 YP_002756998.1 CDS Lm4b_00283 NC_012488.1 282060 282605 D hypothetical protein 282060..282605 Listeria monocytogenes serotype 4b str. CLIP 80459 7702433 YP_002756999.1 CDS Lm4b_00284 NC_012488.1 282671 284131 D phospho-beta-glucosidase 282671..284131 Listeria monocytogenes serotype 4b str. CLIP 80459 7703678 YP_002757000.1 CDS Lm4b_00285 NC_012488.1 284347 284619 D hypothetical protein 284347..284619 Listeria monocytogenes serotype 4b str. CLIP 80459 7703679 YP_002757001.1 CDS Lm4b_00286 NC_012488.1 284636 284791 D hypothetical protein 284636..284791 Listeria monocytogenes serotype 4b str. CLIP 80459 7703680 YP_002757002.1 CDS Lm4b_00287 NC_012488.1 284843 286504 D ABC transporter ATP-binding protein 284843..286504 Listeria monocytogenes serotype 4b str. CLIP 80459 7703681 YP_002757003.1 CDS Lm4b_00288 NC_012488.1 286501 288276 D ABC transporter 286501..288276 Listeria monocytogenes serotype 4b str. CLIP 80459 7703683 YP_002757004.1 CDS inlH NC_012488.1 289067 290713 D internalin H (LPXTG motif) 289067..290713 Listeria monocytogenes serotype 4b str. CLIP 80459 7703684 YP_002757005.1 CDS inlD NC_012488.1 290922 292628 D internalin D 290922..292628 Listeria monocytogenes serotype 4b str. CLIP 80459 7702518 YP_002757006.1 CDS inlE NC_012488.1 292840 294339 D internalin E 292840..294339 Listeria monocytogenes serotype 4b str. CLIP 80459 7702515 YP_002757007.1 CDS Lm4b_00292 NC_012488.1 294473 295612 D dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 294473..295612 Listeria monocytogenes serotype 4b str. CLIP 80459 7702516 YP_002757008.1 CDS Lm4b_00293 NC_012488.1 295759 296175 D transcriptional regulator 295759..296175 Listeria monocytogenes serotype 4b str. CLIP 80459 7703685 YP_002757009.1 CDS Lm4b_00294 NC_012488.1 296182 297141 D hypothetical protein 296182..297141 Listeria monocytogenes serotype 4b str. CLIP 80459 7703686 YP_002757010.1 CDS Lm4b_00295 NC_012488.1 297213 297848 D phosphoglycerate mutase 297213..297848 Listeria monocytogenes serotype 4b str. CLIP 80459 7703687 YP_002757011.1 CDS Lm4b_00296 NC_012488.1 297932 299818 D transporter 297932..299818 Listeria monocytogenes serotype 4b str. CLIP 80459 7703688 YP_002757012.1 CDS Lm4b_00297 NC_012488.1 299847 300932 R internalin complement(299847..300932) Listeria monocytogenes serotype 4b str. CLIP 80459 7703689 YP_002757013.1 CDS Lm4b_00298 NC_012488.1 301066 301692 R hypothetical protein complement(301066..301692) Listeria monocytogenes serotype 4b str. CLIP 80459 7703690 YP_002757014.1 CDS Lm4b_00299 NC_012488.1 301693 303129 R phospho-beta-glucosidase complement(301693..303129) Listeria monocytogenes serotype 4b str. CLIP 80459 7703691 YP_002757015.1 CDS Lm4b_00300 NC_012488.1 303249 304061 R hypothetical protein complement(303249..304061) Listeria monocytogenes serotype 4b str. CLIP 80459 7703692 YP_002757016.1 CDS Lm4b_00301 NC_012488.1 304197 304700 D hypothetical protein 304197..304700 Listeria monocytogenes serotype 4b str. CLIP 80459 7703694 YP_002757017.1 CDS Lm4b_00302 NC_012488.1 304737 305399 R hypothetical protein complement(304737..305399) Listeria monocytogenes serotype 4b str. CLIP 80459 7703695 YP_002757018.1 CDS Lm4b_00303 NC_012488.1 305657 306499 R hypothetical protein complement(305657..306499) Listeria monocytogenes serotype 4b str. CLIP 80459 7703696 YP_002757019.1 CDS Lm4b_00304 NC_012488.1 306516 307337 R hypothetical protein complement(306516..307337) Listeria monocytogenes serotype 4b str. CLIP 80459 7703697 YP_002757020.1 CDS Lm4b_00305 NC_012488.1 307453 308424 D oxidoreductase 307453..308424 Listeria monocytogenes serotype 4b str. CLIP 80459 7703698 YP_002757021.1 CDS Lm4b_00306 NC_012488.1 308462 309562 R sugar ABC transporter ATP-binding protein complement(308462..309562) Listeria monocytogenes serotype 4b str. CLIP 80459 7703699 YP_002757022.1 CDS Lm4b_00307 NC_012488.1 309853 312003 D Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 309853..312003 Listeria monocytogenes serotype 4b str. CLIP 80459 7703700 YP_002757023.1 CDS Lm4b_00308 NC_012488.1 311996 312547 D anaerobic ribonucleotide reductase activator protein 311996..312547 Listeria monocytogenes serotype 4b str. CLIP 80459 7703701 YP_002757024.1 CDS Lm4b_00309 NC_012488.1 312691 313362 R hypothetical protein complement(312691..313362) Listeria monocytogenes serotype 4b str. CLIP 80459 7703702 YP_002757025.1 CDS Lm4b_00310 NC_012488.1 313527 314306 R hypothetical protein complement(313527..314306) Listeria monocytogenes serotype 4b str. CLIP 80459 7703703 YP_002757026.1 CDS Lm4b_00311 NC_012488.1 314396 315058 R ABC transporter permease complement(314396..315058) Listeria monocytogenes serotype 4b str. CLIP 80459 7703704 YP_002757027.1 CDS Lm4b_00312 NC_012488.1 315055 316071 R ABC transporter ATP-binding protein complement(315055..316071) Listeria monocytogenes serotype 4b str. CLIP 80459 7703705 YP_002757028.1 CDS Lm4b_00313 NC_012488.1 316086 316907 R lipoprotein complement(316086..316907) Listeria monocytogenes serotype 4b str. CLIP 80459 7703706 YP_002757029.1 CDS Lm4b_00314 NC_012488.1 317288 318469 D produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; transaminase 317288..318469 Listeria monocytogenes serotype 4b str. CLIP 80459 7703707 YP_002757030.1 CDS Lm4b_00315 NC_012488.1 318682 319395 D two-component response regulator 318682..319395 Listeria monocytogenes serotype 4b str. CLIP 80459 7703708 YP_002757031.1 CDS Lm4b_00316 NC_012488.1 319580 321412 D two-component sensor histidine kinase 319580..321412 Listeria monocytogenes serotype 4b str. CLIP 80459 7703709 YP_002757032.1 CDS Lm4b_00317 NC_012488.1 321403 322731 D YycH protein 321403..322731 Listeria monocytogenes serotype 4b str. CLIP 80459 7703711 YP_002757033.1 CDS Lm4b_00318 NC_012488.1 322734 323573 D YycI protein 322734..323573 Listeria monocytogenes serotype 4b str. CLIP 80459 7703712 YP_002757034.1 CDS Lm4b_00319 NC_012488.1 323693 324523 D hypothetical protein 323693..324523 Listeria monocytogenes serotype 4b str. CLIP 80459 7703713 YP_002757035.1 CDS Lm4b_00320 NC_012488.1 324621 326123 D heat-shock protein htrA serine protease 324621..326123 Listeria monocytogenes serotype 4b str. CLIP 80459 7703714 YP_002757036.1 CDS Lm4b_00321 NC_012488.1 326811 327290 D SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 326811..327290 Listeria monocytogenes serotype 4b str. CLIP 80459 7703715 YP_002757037.1 CDS Lm4b_00322 NC_012488.1 327322 328185 R LysR family transcriptional regulator complement(327322..328185) Listeria monocytogenes serotype 4b str. CLIP 80459 7703716 YP_002757038.1 CDS Lm4b_00323 NC_012488.1 328304 329041 D FMN-containing NADPH-linked nitro/flavin reductase 328304..329041 Listeria monocytogenes serotype 4b str. CLIP 80459 7703717 YP_002757039.1 CDS Lm4b_00324 NC_012488.1 329252 329890 D hypothetical protein 329252..329890 Listeria monocytogenes serotype 4b str. CLIP 80459 7703718 YP_002757040.1 CDS Lm4b_00325 NC_012488.1 329896 331767 R transcriptional antiterminator (BglG family) complement(329896..331767) Listeria monocytogenes serotype 4b str. CLIP 80459 7703719 YP_002757041.1 CDS Lm4b_00326 NC_012488.1 331866 333179 R PTS beta-glucoside-specific enzyme IIC component complement(331866..333179) Listeria monocytogenes serotype 4b str. CLIP 80459 7703720 YP_002757042.1 CDS Lm4b_00327 NC_012488.1 333184 333474 R PTS beta-glucoside-specific enzyme IIB component complement(333184..333474) Listeria monocytogenes serotype 4b str. CLIP 80459 7703721 YP_002757043.1 CDS Lm4b_00328 NC_012488.1 333491 334882 R phospho-beta-glucosidase and phospho-beta-galactosidase complement(333491..334882) Listeria monocytogenes serotype 4b str. CLIP 80459 7703722 YP_002757044.1 CDS Lm4b_00329 NC_012488.1 334875 335216 R PTS beta-glucoside-specific enzyme IIA component complement(334875..335216) Listeria monocytogenes serotype 4b str. CLIP 80459 7703723 YP_002757045.1 CDS Lm4b_00330 NC_012488.1 335380 335667 D hypothetical protein 335380..335667 Listeria monocytogenes serotype 4b str. CLIP 80459 7703724 YP_002757046.1 CDS Lm4b_00331 NC_012488.1 335703 336257 D secreted lysine rich protein 335703..336257 Listeria monocytogenes serotype 4b str. CLIP 80459 7703725 YP_002757047.1 CDS Lm4b_00332 NC_012488.1 336448 337536 D low specificity L-allo-threonine aldolase 336448..337536 Listeria monocytogenes serotype 4b str. CLIP 80459 7703726 YP_002757048.1 CDS Lm4b_00333 NC_012488.1 337524 338309 D hypothetical protein 337524..338309 Listeria monocytogenes serotype 4b str. CLIP 80459 7703727 YP_002757049.1 CDS Lm4b_00334 NC_012488.1 338532 339206 D thiamin biosynthesis protein 338532..339206 Listeria monocytogenes serotype 4b str. CLIP 80459 7703728 YP_002757050.1 CDS Lm4b_00335 NC_012488.1 339199 340008 D catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase 339199..340008 Listeria monocytogenes serotype 4b str. CLIP 80459 7703729 YP_002757051.1 CDS Lm4b_00336 NC_012488.1 340005 340808 D phosphomethylpyrimidine kinase (ThiD) 340005..340808 Listeria monocytogenes serotype 4b str. CLIP 80459 7703730 YP_002757052.1 CDS thiE NC_012488.1 340805 341449 D Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase 340805..341449 Listeria monocytogenes serotype 4b str. CLIP 80459 7703731 YP_002757053.1 CDS Lm4b_00338 NC_012488.1 341476 342891 R phospho-beta-glucosidase complement(341476..342891) Listeria monocytogenes serotype 4b str. CLIP 80459 7703732 YP_002757054.1 CDS Lm4b_00339 NC_012488.1 343105 344349 R peptidoglycan linked protein (LPXTG motif) complement(343105..344349) Listeria monocytogenes serotype 4b str. CLIP 80459 7703733 YP_002757055.1 CDS Lm4b_00340 NC_012488.1 344678 345337 D hypothetical protein 344678..345337 Listeria monocytogenes serotype 4b str. CLIP 80459 7703734 YP_002757056.1 CDS Lm4b_00341 NC_012488.1 345635 346027 D hypothetical protein 345635..346027 Listeria monocytogenes serotype 4b str. CLIP 80459 7703735 YP_002757057.1 CDS Lm4b_00342 NC_012488.1 346062 346835 R hypothetical protein complement(346062..346835) Listeria monocytogenes serotype 4b str. CLIP 80459 7703736 YP_002757058.1 CDS Lm4b_00343 NC_012488.1 346990 347457 D hypothetical protein 346990..347457 Listeria monocytogenes serotype 4b str. CLIP 80459 7703737 YP_002757059.1 CDS Lm4b_00344 NC_012488.1 347725 348627 D transcriptional regulator 347725..348627 Listeria monocytogenes serotype 4b str. CLIP 80459 7703738 YP_002757060.1 CDS Lm4b_00345 NC_012488.1 348791 349663 D transcriptional regulator 348791..349663 Listeria monocytogenes serotype 4b str. CLIP 80459 7703739 YP_002757061.1 CDS Lm4b_00346 NC_012488.1 <349862 353911 D hypothetical protein <349862..353911 Listeria monocytogenes serotype 4b str. CLIP 80459 7703740 YP_002757062.1 CDS Lm4b_00347 NC_012488.1 354049 354729 D hypothetical protein 354049..354729 Listeria monocytogenes serotype 4b str. CLIP 80459 7703741 YP_002757063.1 CDS Lm4b_00348 NC_012488.1 354884 356740 R internalin, peptidoglycan bound protein (LPXTG motif) complement(354884..356740) Listeria monocytogenes serotype 4b str. CLIP 80459 7703742 YP_002757064.1 CDS Lm4b_00349 NC_012488.1 357309 360020 D internalin, peptidoglycan bound protein (LPXTG motif) 357309..360020 Listeria monocytogenes serotype 4b str. CLIP 80459 7703743 YP_002757065.1 CDS Lm4b_00350 NC_012488.1 360411 365738 D internalin proteins, peptidoglycan bound protein (LPXTG motif) 360411..365738 Listeria monocytogenes serotype 4b str. CLIP 80459 7703744 YP_002757066.1 CDS Lm4b_00351 NC_012488.1 365962 366486 D hypothetical protein 365962..366486 Listeria monocytogenes serotype 4b str. CLIP 80459 7703745 YP_002757067.1 CDS Lm4b_00352 NC_012488.1 366699 366983 D hypothetical protein 366699..366983 Listeria monocytogenes serotype 4b str. CLIP 80459 7703746 YP_002757068.1 CDS Lm4b_00353 NC_012488.1 366984 367352 D hypothetical protein 366984..367352 Listeria monocytogenes serotype 4b str. CLIP 80459 7703747 YP_002757069.1 CDS Lm4b_00354b NC_012488.1 367349 368785 D truncated gene 367349..368785 Listeria monocytogenes serotype 4b str. CLIP 80459 7703749 YP_002757070.1 CDS Lm4b_00355 NC_012488.1 368797 369192 D hypothetical protein 368797..369192 Listeria monocytogenes serotype 4b str. CLIP 80459 7703750 YP_002757071.1 CDS Lm4b_00356 NC_012488.1 369553 369783 D hypothetical protein 369553..369783 Listeria monocytogenes serotype 4b str. CLIP 80459 7703751 YP_002757072.1 CDS Lm4b_00357 NC_012488.1 369862 370089 D hypothetical protein 369862..370089 Listeria monocytogenes serotype 4b str. CLIP 80459 7703752 YP_002757073.1 CDS Lm4b_00358 NC_012488.1 370258 370518 D hypothetical protein 370258..370518 Listeria monocytogenes serotype 4b str. CLIP 80459 7703753 YP_002757074.1 CDS Lm4b_00359 NC_012488.1 370894 371082 D hypothetical protein 370894..371082 Listeria monocytogenes serotype 4b str. CLIP 80459 7703754 YP_002757075.1 CDS Lm4b_00360 NC_012488.1 371202 373199 R transketolase complement(371202..373199) Listeria monocytogenes serotype 4b str. CLIP 80459 7703755 YP_002757076.1 CDS Lm4b_00361 NC_012488.1 373201 373857 R similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; putative translaldolase complement(373201..373857) Listeria monocytogenes serotype 4b str. CLIP 80459 7703756 YP_002757077.1 CDS Lm4b_00362 NC_012488.1 373904 374668 R short chain dehydrogenase complement(373904..374668) Listeria monocytogenes serotype 4b str. CLIP 80459 7703757 YP_002757078.1 CDS Lm4b_00363 NC_012488.1 374693 375139 R sugar-phosphate isomerase complement(374693..375139) Listeria monocytogenes serotype 4b str. CLIP 80459 7703758 YP_002757079.1 CDS Lm4b_00364 NC_012488.1 375146 375910 R triosephosphate isomerase complement(375146..375910) Listeria monocytogenes serotype 4b str. CLIP 80459 7703759 YP_002757080.1 CDS Lm4b_00365 NC_012488.1 375914 376564 R dihydroxyacetone kinase complement(375914..376564) Listeria monocytogenes serotype 4b str. CLIP 80459 7703760 YP_002757081.1 CDS Lm4b_00366 NC_012488.1 376586 377581 R dihydroxyacetone kinase complement(376586..377581) Listeria monocytogenes serotype 4b str. CLIP 80459 7703761 YP_002757082.1 CDS Lm4b_00367 NC_012488.1 377603 377944 R hypothetical protein complement(377603..377944) Listeria monocytogenes serotype 4b str. CLIP 80459 7703762 YP_002757083.1 CDS Lm4b_00368 NC_012488.1 377960 378391 R hypothetical protein complement(377960..378391) Listeria monocytogenes serotype 4b str. CLIP 80459 7703763 YP_002757084.1 CDS Lm4b_00369 NC_012488.1 378476 378853 R phosphotransferase mannnose-specific family component IIA complement(378476..378853) Listeria monocytogenes serotype 4b str. CLIP 80459 7703764 YP_002757085.1 CDS Lm4b_00370 NC_012488.1 379036 379800 D regulatory protein (DeoR family) 379036..379800 Listeria monocytogenes serotype 4b str. CLIP 80459 7703765 YP_002757086.1 CDS Lm4b_00371 NC_012488.1 379866 380276 D hypothetical protein 379866..380276 Listeria monocytogenes serotype 4b str. CLIP 80459 7703766 YP_002757087.1 CDS Lm4b_00372 NC_012488.1 380374 382143 D internalin 380374..382143 Listeria monocytogenes serotype 4b str. CLIP 80459 7704200 YP_002757088.1 CDS Lm4b_00373 NC_012488.1 382184 383710 R fatty-acid--CoA ligase complement(382184..383710) Listeria monocytogenes serotype 4b str. CLIP 80459 7704201 YP_002757089.1 CDS Lm4b_00374 NC_012488.1 383947 385467 D Reduces fumarate to succinate in anaerobic bacterial respiration; fumarate reductase flavoprotein subunit 383947..385467 Listeria monocytogenes serotype 4b str. CLIP 80459 7704202 YP_002757090.1 CDS Lm4b_00375 NC_012488.1 385671 386687 D oxidoreductase 385671..386687 Listeria monocytogenes serotype 4b str. CLIP 80459 7704203 YP_002757091.1 CDS Lm4b_00376 NC_012488.1 386888 387334 D PTS system, enzyme IIA component 386888..387334 Listeria monocytogenes serotype 4b str. CLIP 80459 7704204 YP_002757092.1 CDS Lm4b_00377 NC_012488.1 387348 388742 D PTS system, fructose-specific enzyme IIBC component 387348..388742 Listeria monocytogenes serotype 4b str. CLIP 80459 7704205 YP_002757093.1 CDS Lm4b_00378 NC_012488.1 388742 389602 D hypothetical protein 388742..389602 Listeria monocytogenes serotype 4b str. CLIP 80459 7704092 YP_002757094.1 CDS Lm4b_00379 NC_012488.1 389659 390429 D transcriptional regulator (DeoR family) 389659..390429 Listeria monocytogenes serotype 4b str. CLIP 80459 7702079 YP_002757095.1 CDS Lm4b_00380 NC_012488.1 390769 391503 R hypothetical protein complement(390769..391503) Listeria monocytogenes serotype 4b str. CLIP 80459 7702080 YP_002757096.1 CDS Lm4b_00381 NC_012488.1 391500 391679 R hypothetical protein complement(391500..391679) Listeria monocytogenes serotype 4b str. CLIP 80459 7702081 YP_002757097.1 CDS Lm4b_00382 NC_012488.1 391753 392382 R peptidase E complement(391753..392382) Listeria monocytogenes serotype 4b str. CLIP 80459 7702082 YP_002757098.1 CDS Lm4b_00383 NC_012488.1 392480 393427 D transcription regulator 392480..393427 Listeria monocytogenes serotype 4b str. CLIP 80459 7702083 YP_002757099.1 CDS Lm4b_00384 NC_012488.1 393556 395040 D hypothetical protein 393556..395040 Listeria monocytogenes serotype 4b str. CLIP 80459 7702084 YP_002757100.1 CDS Lm4b_00385 NC_012488.1 395037 396197 D hypothetical protein 395037..396197 Listeria monocytogenes serotype 4b str. CLIP 80459 7702085 YP_002757101.1 CDS Lm4b_00386 NC_012488.1 396215 397480 D hypothetical protein 396215..397480 Listeria monocytogenes serotype 4b str. CLIP 80459 7702086 YP_002757102.1 CDS Lm4b_00387 NC_012488.1 397553 398062 D different proteins 397553..398062 Listeria monocytogenes serotype 4b str. CLIP 80459 7702087 YP_002757103.1 CDS Lm4b_00388 NC_012488.1 398158 398877 D hypothetical protein 398158..398877 Listeria monocytogenes serotype 4b str. CLIP 80459 7702088 YP_002757104.1 CDS Lm4b_00389 NC_012488.1 398914 399249 D hypothetical protein 398914..399249 Listeria monocytogenes serotype 4b str. CLIP 80459 7702089 YP_002757105.1 CDS Lm4b_00390 NC_012488.1 399288 400001 R GntR family transcriptional regulator complement(399288..400001) Listeria monocytogenes serotype 4b str. CLIP 80459 7702090 YP_002757106.1 CDS Lm4b_00391 NC_012488.1 400158 401600 D beta-glucosidase 400158..401600 Listeria monocytogenes serotype 4b str. CLIP 80459 7702091 YP_002757107.1 CDS Lm4b_00392 NC_012488.1 401593 402927 D PTS betaglucoside-specific enzyme IIC component 401593..402927 Listeria monocytogenes serotype 4b str. CLIP 80459 7702092 YP_002757108.1 CDS Lm4b_00393 NC_012488.1 402945 403247 D PTS betaglucoside-specific enzyme IIB component 402945..403247 Listeria monocytogenes serotype 4b str. CLIP 80459 7702093 YP_002757109.1 CDS Lm4b_00394 NC_012488.1 403334 403528 D hypothetical protein 403334..403528 Listeria monocytogenes serotype 4b str. CLIP 80459 7702094 YP_002757110.1 CDS Lm4b_00395 NC_012488.1 403567 404487 R transcription regulator complement(403567..404487) Listeria monocytogenes serotype 4b str. CLIP 80459 7702095 YP_002757111.1 CDS Lm4b_00396 NC_012488.1 404590 405009 D hypothetical protein 404590..405009 Listeria monocytogenes serotype 4b str. CLIP 80459 7702096 YP_002757112.1 CDS Lm4b_00397 NC_012488.1 405228 405674 D hypothetical protein 405228..405674 Listeria monocytogenes serotype 4b str. CLIP 80459 7702097 YP_002757113.1 CDS Lm4b_00399 NC_012488.1 406632 407018 D hypothetical protein 406632..407018 Listeria monocytogenes serotype 4b str. CLIP 80459 7702100 YP_002757114.1 CDS Lm4b_00400 NC_012488.1 407091 407852 R transcription repressor of myo-inositol catabolism operon IolR complement(407091..407852) Listeria monocytogenes serotype 4b str. CLIP 80459 7702101 YP_002757115.1 CDS Lm4b_00401 NC_012488.1 408047 409513 D methylmalonate-semialdehyde dehydrogenase IolA 408047..409513 Listeria monocytogenes serotype 4b str. CLIP 80459 7702102 YP_002757116.1 CDS Lm4b_00402 NC_012488.1 409526 410347 D IolB protein 409526..410347 Listeria monocytogenes serotype 4b str. CLIP 80459 7702103 YP_002757117.1 CDS Lm4b_00403 NC_012488.1 410364 411341 D IolC protein and to fructokinase 410364..411341 Listeria monocytogenes serotype 4b str. CLIP 80459 7702104 YP_002757118.1 CDS Lm4b_00404 NC_012488.1 411351 413270 D IolD protein, to acetolactate synthase 411351..413270 Listeria monocytogenes serotype 4b str. CLIP 80459 7702105 YP_002757119.1 CDS Lm4b_00405 NC_012488.1 413402 413773 D YhdG protein 413402..413773 Listeria monocytogenes serotype 4b str. CLIP 80459 7702106 YP_002757120.1 CDS Lm4b_00406 NC_012488.1 413867 414235 D hypothetical protein 413867..414235 Listeria monocytogenes serotype 4b str. CLIP 80459 7702107 YP_002757121.1 CDS ltrA NC_012488.1 414259 415374 R low temperature requirement protein A complement(414259..415374) Listeria monocytogenes serotype 4b str. CLIP 80459 7702108 YP_002757122.1 CDS Lm4b_00408 NC_012488.1 415505 416170 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 415505..416170 Listeria monocytogenes serotype 4b str. CLIP 80459 7702541 YP_002757123.1 CDS Lm4b_00409 NC_012488.1 416338 416637 D hypothetical protein 416338..416637 Listeria monocytogenes serotype 4b str. CLIP 80459 7702109 YP_002757124.1 CDS Lm4b_00410 NC_012488.1 416634 417578 D hypothetical protein 416634..417578 Listeria monocytogenes serotype 4b str. CLIP 80459 7702110 YP_002757125.1 CDS Lm4b_00411 NC_012488.1 417613 418062 D hypothetical protein 417613..418062 Listeria monocytogenes serotype 4b str. CLIP 80459 7702111 YP_002757126.1 CDS Lm4b_00412 NC_012488.1 418206 418889 D extracellular P60 protein 418206..418889 Listeria monocytogenes serotype 4b str. CLIP 80459 7702112 YP_002757127.1 CDS Lm4b_00414 NC_012488.1 419373 420173 R catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase complement(419373..420173) Listeria monocytogenes serotype 4b str. CLIP 80459 7702114 YP_002757128.1 CDS Lm4b_00415 NC_012488.1 421111 422334 D cell surface protein (LPXTG motif) 421111..422334 Listeria monocytogenes serotype 4b str. CLIP 80459 7702115 YP_002757129.1 CDS Lm4b_00416 NC_012488.1 422451 423101 D transcription regulator 422451..423101 Listeria monocytogenes serotype 4b str. CLIP 80459 7702116 YP_002757130.1 CDS Lm4b_00417 NC_012488.1 423119 423745 D hypothetical protein 423119..423745 Listeria monocytogenes serotype 4b str. CLIP 80459 7702117 YP_002757131.1 CDS Lm4b_00418 NC_012488.1 423763 424437 D ABC transporter ATP-binding protein 423763..424437 Listeria monocytogenes serotype 4b str. CLIP 80459 7702118 YP_002757132.1 CDS Lm4b_00419b NC_012488.1 424422 425600 D ABC transporter ATP-binding protein 424422..425600 Listeria monocytogenes serotype 4b str. CLIP 80459 7702120 YP_002757133.1 CDS Lm4b_00420 NC_012488.1 425619 425762 D hypothetical protein 425619..425762 Listeria monocytogenes serotype 4b str. CLIP 80459 7702121 YP_002757134.1 CDS Lm4b_00421 NC_012488.1 425833 426315 D hypothetical protein 425833..426315 Listeria monocytogenes serotype 4b str. CLIP 80459 7702122 YP_002757135.1 CDS Lm4b_00422 NC_012488.1 426484 426942 D phosphotransferase system enzyme IIA 426484..426942 Listeria monocytogenes serotype 4b str. CLIP 80459 7702123 YP_002757136.1 CDS Lm4b_00423 NC_012488.1 426939 427271 D fructose-specific phosphotransferase enzyme IIB 426939..427271 Listeria monocytogenes serotype 4b str. CLIP 80459 7702124 YP_002757137.1 CDS Lm4b_00424 NC_012488.1 427275 428387 D fructose-specific phosphotransferase enzyme IIC 427275..428387 Listeria monocytogenes serotype 4b str. CLIP 80459 7702125 YP_002757138.1 CDS Lm4b_00425 NC_012488.1 428403 431036 D alpha-mannosidase 428403..431036 Listeria monocytogenes serotype 4b str. CLIP 80459 7702126 YP_002757139.1 CDS Lm4b_00426 NC_012488.1 431069 433003 D transcriptional antiterminator (BglG family) 431069..433003 Listeria monocytogenes serotype 4b str. CLIP 80459 7702127 YP_002757140.1 CDS Lm4b_00427 NC_012488.1 433130 433546 D hypothetical protein 433130..433546 Listeria monocytogenes serotype 4b str. CLIP 80459 7702128 YP_002757141.1 CDS Lm4b_00428 NC_012488.1 433537 433935 D hypothetical protein 433537..433935 Listeria monocytogenes serotype 4b str. CLIP 80459 7702129 YP_002757142.1 CDS Lm4b_00429 NC_012488.1 434044 435051 D phosphate transport protein 434044..435051 Listeria monocytogenes serotype 4b str. CLIP 80459 7702130 YP_002757143.1 CDS Lm4b_00430 NC_012488.1 435067 435447 D YyaH protein 435067..435447 Listeria monocytogenes serotype 4b str. CLIP 80459 7702131 YP_002757144.1 CDS Lm4b_00431 NC_012488.1 435516 435908 D hypothetical protein 435516..435908 Listeria monocytogenes serotype 4b str. CLIP 80459 7702132 YP_002757145.1 CDS Lm4b_00432 NC_012488.1 435921 436343 D hypothetical protein 435921..436343 Listeria monocytogenes serotype 4b str. CLIP 80459 7702133 YP_002757146.1 CDS inlF NC_012488.1 436571 439042 D internalin, peptidoglycan bound protein (LPXTG motif) 436571..439042 Listeria monocytogenes serotype 4b str. CLIP 80459 7702134 YP_002757147.1 CDS Lm4b_00434 NC_012488.1 439090 441693 R phosphoenolpyruvate synthase complement(439090..441693) Listeria monocytogenes serotype 4b str. CLIP 80459 7702517 YP_002757148.1 CDS Lm4b_00435 NC_012488.1 441893 442765 R hypothetical protein complement(441893..442765) Listeria monocytogenes serotype 4b str. CLIP 80459 7702135 YP_002757149.1 CDS Lm4b_00436 NC_012488.1 443108 443299 D hypothetical protein 443108..443299 Listeria monocytogenes serotype 4b str. CLIP 80459 7702136 YP_002757150.1 CDS Lm4b_00437 NC_012488.1 443326 444135 D hypothetical protein 443326..444135 Listeria monocytogenes serotype 4b str. CLIP 80459 7702137 YP_002757151.1 CDS Lm4b_00438 NC_012488.1 444428 445828 D endo-1,4-beta-xylanase 444428..445828 Listeria monocytogenes serotype 4b str. CLIP 80459 7702138 YP_002757152.1 CDS Lm4b_00439 NC_012488.1 445955 446158 D transcription regulator 445955..446158 Listeria monocytogenes serotype 4b str. CLIP 80459 7702139 YP_002757153.1 CDS Lm4b_00440 NC_012488.1 446160 446570 D hypothetical protein 446160..446570 Listeria monocytogenes serotype 4b str. CLIP 80459 7702140 YP_002757154.1 CDS Lm4b_00441 NC_012488.1 446623 446922 R hypothetical protein complement(446623..446922) Listeria monocytogenes serotype 4b str. CLIP 80459 7702141 YP_002757155.1 CDS Lm4b_00442 NC_012488.1 447003 447557 R hypothetical protein complement(447003..447557) Listeria monocytogenes serotype 4b str. CLIP 80459 7702142 YP_002757156.1 CDS Lm4b_00443 NC_012488.1 447704 448516 D hypothetical protein 447704..448516 Listeria monocytogenes serotype 4b str. CLIP 80459 7702143 YP_002757157.1 CDS Lm4b_00444 NC_012488.1 448535 449392 R glucose uptake protein complement(448535..449392) Listeria monocytogenes serotype 4b str. CLIP 80459 7702144 YP_002757158.1 CDS Lm4b_00445 NC_012488.1 449554 451515 D transcription antiterminator BglG family 449554..451515 Listeria monocytogenes serotype 4b str. CLIP 80459 7702145 YP_002757159.1 CDS Lm4b_00446 NC_012488.1 451515 451979 D PTS fructose-specific enzyme IIA component 451515..451979 Listeria monocytogenes serotype 4b str. CLIP 80459 7702146 YP_002757160.1 CDS Lm4b_00447 NC_012488.1 451976 452296 D PTS fructose-specific enzyme IIB component 451976..452296 Listeria monocytogenes serotype 4b str. CLIP 80459 7702147 YP_002757161.1 CDS Lm4b_00448 NC_012488.1 452309 453415 D PTS fructose-specific enzyme IIC component 452309..453415 Listeria monocytogenes serotype 4b str. CLIP 80459 7702148 YP_002757162.1 CDS Lm4b_00449 NC_012488.1 453431 456013 D sugar hydrolase 453431..456013 Listeria monocytogenes serotype 4b str. CLIP 80459 7702149 YP_002757163.1 CDS Lm4b_00450 NC_012488.1 456036 456911 R LysR family transcriptional regulator complement(456036..456911) Listeria monocytogenes serotype 4b str. CLIP 80459 7702150 YP_002757164.1 CDS Lm4b_00451 NC_012488.1 457029 457598 D acetyltransferase 457029..457598 Listeria monocytogenes serotype 4b str. CLIP 80459 7702151 YP_002757165.1 CDS Lm4b_00452 NC_012488.1 457612 458358 D oxidoreductase 457612..458358 Listeria monocytogenes serotype 4b str. CLIP 80459 7702152 YP_002757166.1 CDS Lm4b_00454 NC_012488.1 459235 465822 D cell wall-associated protein precursor wapA 459235..465822 Listeria monocytogenes serotype 4b str. CLIP 80459 7702154 YP_002757167.1 CDS Lm4b_00455 NC_012488.1 465822 466304 D hypothetical protein 465822..466304 Listeria monocytogenes serotype 4b str. CLIP 80459 7702156 YP_002757168.1 CDS Lm4b_00457 NC_012488.1 467338 467694 D hypothetical protein 467338..467694 Listeria monocytogenes serotype 4b str. CLIP 80459 7702158 YP_002757169.1 CDS Lm4b_00458 NC_012488.1 467909 468172 D hypothetical protein 467909..468172 Listeria monocytogenes serotype 4b str. CLIP 80459 7702159 YP_002757170.1 CDS Lm4b_00459 NC_012488.1 468422 469009 D hypothetical protein 468422..469009 Listeria monocytogenes serotype 4b str. CLIP 80459 7702881 YP_002757171.1 CDS Lm4b_00460 NC_012488.1 469034 469732 D hypothetical protein 469034..469732 Listeria monocytogenes serotype 4b str. CLIP 80459 7702160 YP_002757172.1 CDS inlA NC_012488.1 470439 472841 D Internalin A 470439..472841 Listeria monocytogenes serotype 4b str. CLIP 80459 7702161 YP_002757173.1 CDS inlB NC_012488.1 472926 474818 D Internalin B 472926..474818 Listeria monocytogenes serotype 4b str. CLIP 80459 7702512 YP_002757174.1 CDS Lm4b_00463 NC_012488.1 474933 475418 R hypothetical protein complement(474933..475418) Listeria monocytogenes serotype 4b str. CLIP 80459 7702513 YP_002757175.1 CDS Lm4b_00464 NC_012488.1 475517 476362 D hypothetical protein 475517..476362 Listeria monocytogenes serotype 4b str. CLIP 80459 7702162 YP_002757176.1 CDS Lm4b_00465 NC_012488.1 476518 477135 D hypothetical protein 476518..477135 Listeria monocytogenes serotype 4b str. CLIP 80459 7702163 YP_002757177.1 CDS Lm4b_00466 NC_012488.1 477168 478436 R module of peptide synthetase complement(477168..478436) Listeria monocytogenes serotype 4b str. CLIP 80459 7702164 YP_002757178.1 CDS Lm4b_00467 NC_012488.1 478574 479077 D hypothetical protein 478574..479077 Listeria monocytogenes serotype 4b str. CLIP 80459 7702165 YP_002757179.1 CDS Lm4b_00468 NC_012488.1 479119 481155 R D-alanyl-D-alanine carboxypeptidase complement(479119..481155) Listeria monocytogenes serotype 4b str. CLIP 80459 7702166 YP_002757180.1 CDS Lm4b_00469 NC_012488.1 481327 481641 D hypothetical protein 481327..481641 Listeria monocytogenes serotype 4b str. CLIP 80459 7702167 YP_002757181.1 CDS Lm4b_00470 NC_012488.1 481778 482707 D transcription regulator LytR 481778..482707 Listeria monocytogenes serotype 4b str. CLIP 80459 7702168 YP_002757182.1 CDS Lm4b_00471 NC_012488.1 482755 483303 R hypothetical protein complement(482755..483303) Listeria monocytogenes serotype 4b str. CLIP 80459 7702169 YP_002757183.1 CDS Lm4b_00472 NC_012488.1 483537 484262 D hypothetical protein 483537..484262 Listeria monocytogenes serotype 4b str. CLIP 80459 7702170 YP_002757184.1 CDS Lm4b_00473 NC_012488.1 484306 484971 R hypothetical protein complement(484306..484971) Listeria monocytogenes serotype 4b str. CLIP 80459 7702171 YP_002757185.1 CDS Lm4b_00474 NC_012488.1 484992 485747 R hypothetical protein complement(484992..485747) Listeria monocytogenes serotype 4b str. CLIP 80459 7702172 YP_002757186.1 CDS Lm4b_00475 NC_012488.1 485864 488023 R hypothetical protein complement(485864..488023) Listeria monocytogenes serotype 4b str. CLIP 80459 7702173 YP_002757187.1 CDS Lm4b_00476 NC_012488.1 488020 489168 R hypothetical protein complement(488020..489168) Listeria monocytogenes serotype 4b str. CLIP 80459 7702174 YP_002757188.1 CDS Lm4b_00477 NC_012488.1 489173 490120 R hypothetical protein complement(489173..490120) Listeria monocytogenes serotype 4b str. CLIP 80459 7702175 YP_002757189.1 CDS Lm4b_00478 NC_012488.1 490276 491871 D hypothetical protein 490276..491871 Listeria monocytogenes serotype 4b str. CLIP 80459 7702176 YP_002757190.1 CDS Lm4b_00480 NC_012488.1 492005 493288 D permease 492005..493288 Listeria monocytogenes serotype 4b str. CLIP 80459 7702178 YP_002757191.1 CDS Lm4b_00481 NC_012488.1 493289 494389 D hypothetical protein 493289..494389 Listeria monocytogenes serotype 4b str. CLIP 80459 7702179 YP_002757192.1 CDS Lm4b_00482 NC_012488.1 494382 495932 D hydantoinase 494382..495932 Listeria monocytogenes serotype 4b str. CLIP 80459 7702180 YP_002757193.1 CDS Lm4b_00483 NC_012488.1 496106 496333 R hypothetical protein complement(496106..496333) Listeria monocytogenes serotype 4b str. CLIP 80459 7702181 YP_002757194.1 CDS Lm4b_00484 NC_012488.1 496568 498142 D transcription regulator 496568..498142 Listeria monocytogenes serotype 4b str. CLIP 80459 7702182 YP_002757195.1 CDS Lm4b_00485 NC_012488.1 498368 500449 D membrane associated lipoprotein 498368..500449 Listeria monocytogenes serotype 4b str. CLIP 80459 7702183 YP_002757196.1 CDS Lm4b_00486 NC_012488.1 500585 502654 D membrane associated lipoprotein 500585..502654 Listeria monocytogenes serotype 4b str. CLIP 80459 7702184 YP_002757197.1 CDS Lm4b_00487 NC_012488.1 502789 504549 D membrane associated lipoprotein 502789..504549 Listeria monocytogenes serotype 4b str. CLIP 80459 7702185 YP_002757198.1 CDS Lm4b_00488 NC_012488.1 504615 505088 D hypothetical protein 504615..505088 Listeria monocytogenes serotype 4b str. CLIP 80459 7702186 YP_002757199.1 CDS Lm4b_00489 NC_012488.1 505108 505593 D hypothetical protein 505108..505593 Listeria monocytogenes serotype 4b str. CLIP 80459 7702187 YP_002757200.1 CDS Lm4b_00490 NC_012488.1 505621 505926 D peptidoglycan linked protein (LPXTG motif) 505621..505926 Listeria monocytogenes serotype 4b str. CLIP 80459 7702188 YP_002757201.1 CDS Lm4b_00491 NC_012488.1 506002 506268 D transposase 506002..506268 Listeria monocytogenes serotype 4b str. CLIP 80459 7702189 YP_002757202.1 CDS Lm4b_00492 NC_012488.1 507002 507619 D hypothetical protein 507002..507619 Listeria monocytogenes serotype 4b str. CLIP 80459 7702190 YP_002757203.1 CDS Lm4b_00493 NC_012488.1 507929 508276 D hypothetical protein 507929..508276 Listeria monocytogenes serotype 4b str. CLIP 80459 7702191 YP_002757204.1 CDS Lm4b_00494 NC_012488.1 508680 508922 D hypothetical protein 508680..508922 Listeria monocytogenes serotype 4b str. CLIP 80459 7702192 YP_002757205.1 CDS Lm4b_00495 NC_012488.1 509005 509982 R oxetanocin A resistance protein oxrB complement(509005..509982) Listeria monocytogenes serotype 4b str. CLIP 80459 7702193 YP_002757206.1 CDS Lm4b_00496 NC_012488.1 510078 510419 R hypothetical protein complement(510078..510419) Listeria monocytogenes serotype 4b str. CLIP 80459 7702194 YP_002757207.1 CDS Lm4b_00497 NC_012488.1 510744 511571 D hypothetical protein 510744..511571 Listeria monocytogenes serotype 4b str. CLIP 80459 7702195 YP_002757208.1 CDS Lm4b_00498 NC_012488.1 511599 511958 D secreted protein 511599..511958 Listeria monocytogenes serotype 4b str. CLIP 80459 7702196 YP_002757209.1 CDS Lm4b_00499 NC_012488.1 512084 512329 D hypothetical protein 512084..512329 Listeria monocytogenes serotype 4b str. CLIP 80459 7702197 YP_002757210.1 CDS Lm4b_00500 NC_012488.1 512284 512844 D transcriptional regulator 512284..512844 Listeria monocytogenes serotype 4b str. CLIP 80459 7702198 YP_002757211.1 CDS Lm4b_00501 NC_012488.1 512954 514654 D in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen 512954..514654 Listeria monocytogenes serotype 4b str. CLIP 80459 7702199 YP_002757212.1 CDS Lm4b_00502 NC_012488.1 514805 515908 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 514805..515908 Listeria monocytogenes serotype 4b str. CLIP 80459 7702200 YP_002757213.1 CDS Lm4b_00503 NC_012488.1 515998 516477 D hypothetical protein 515998..516477 Listeria monocytogenes serotype 4b str. CLIP 80459 7702201 YP_002757214.1 CDS Lm4b_00504 NC_012488.1 516635 517000 D iron regulated; catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source; heme-degrading monooxygenase IsdG 516635..517000 Listeria monocytogenes serotype 4b str. CLIP 80459 7702202 YP_002757215.1 CDS Lm4b_00505 NC_012488.1 517128 517496 D hypothetical protein 517128..517496 Listeria monocytogenes serotype 4b str. CLIP 80459 7702203 YP_002757216.1 CDS Lm4b_00506 NC_012488.1 517493 518794 D hypothetical protein 517493..518794 Listeria monocytogenes serotype 4b str. CLIP 80459 7702205 YP_002757217.1 CDS Lm4b_00507 NC_012488.1 518807 519184 D hypothetical protein 518807..519184 Listeria monocytogenes serotype 4b str. CLIP 80459 7702206 YP_002757218.1 CDS Lm4b_00508 NC_012488.1 519418 519993 D hypothetical protein 519418..519993 Listeria monocytogenes serotype 4b str. CLIP 80459 7702207 YP_002757219.1 CDS rpmF NC_012488.1 520058 520228 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 520058..520228 Listeria monocytogenes serotype 4b str. CLIP 80459 7702208 YP_002757220.1 CDS Lm4b_00510 NC_012488.1 520321 521049 D hypothetical protein 520321..521049 Listeria monocytogenes serotype 4b str. CLIP 80459 7702427 YP_002757221.1 CDS Lm4b_00511 NC_012488.1 521086 521979 R LysR family transcriptional regulator complement(521086..521979) Listeria monocytogenes serotype 4b str. CLIP 80459 7702209 YP_002757222.1 CDS Lm4b_00512 NC_012488.1 522177 524171 D NADH:flavin oxidoreductase 522177..524171 Listeria monocytogenes serotype 4b str. CLIP 80459 7702210 YP_002757223.1 CDS aroE NC_012488.1 524271 525146 D AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 524271..525146 Listeria monocytogenes serotype 4b str. CLIP 80459 7702211 YP_002757224.1 CDS aroD NC_012488.1 525212 525970 D catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis; 3-dehydroquinate dehydratase 525212..525970 Listeria monocytogenes serotype 4b str. CLIP 80459 7702212 YP_002757225.1 CDS Lm4b_00515 NC_012488.1 526039 526947 R LysR family transcriptional regulator complement(526039..526947) Listeria monocytogenes serotype 4b str. CLIP 80459 7702213 YP_002757226.1 CDS Lm4b_00516 NC_012488.1 527022 528782 R acylase complement(527022..528782) Listeria monocytogenes serotype 4b str. CLIP 80459 7702214 YP_002757227.1 CDS Lm4b_00517 NC_012488.1 528974 529567 D esterase 528974..529567 Listeria monocytogenes serotype 4b str. CLIP 80459 7702215 YP_002757228.1 CDS Lm4b_00518 NC_012488.1 529753 530712 D hypothetical protein 529753..530712 Listeria monocytogenes serotype 4b str. CLIP 80459 7702216 YP_002757229.1 CDS Lm4b_00519 NC_012488.1 530787 531011 D YnzC protein 530787..531011 Listeria monocytogenes serotype 4b str. CLIP 80459 7702217 YP_002757230.1 CDS Lm4b_00520 NC_012488.1 531178 531627 D ribose 5-phosphate isomerase 531178..531627 Listeria monocytogenes serotype 4b str. CLIP 80459 7702218 YP_002757231.1 CDS Lm4b_00521 NC_012488.1 531624 532292 D ribulose-5-phosphate 3 epimerase 531624..532292 Listeria monocytogenes serotype 4b str. CLIP 80459 7702219 YP_002757232.1 CDS Lm4b_00522 NC_012488.1 532299 532949 D transaldolase 532299..532949 Listeria monocytogenes serotype 4b str. CLIP 80459 7702220 YP_002757233.1 CDS Lm4b_00523 NC_012488.1 533058 535118 D transcription antiterminator (BglG family) 533058..535118 Listeria monocytogenes serotype 4b str. CLIP 80459 7702221 YP_002757234.1 CDS Lm4b_00524 NC_012488.1 535122 535724 D sugar-phosphate isomerase 535122..535724 Listeria monocytogenes serotype 4b str. CLIP 80459 7702222 YP_002757235.1 CDS Lm4b_00525 NC_012488.1 535752 536219 D PTS fructose-specific enzyme IIA component 535752..536219 Listeria monocytogenes serotype 4b str. CLIP 80459 7702223 YP_002757236.1 CDS Lm4b_00526 NC_012488.1 536236 536634 D hypothetical protein 536236..536634 Listeria monocytogenes serotype 4b str. CLIP 80459 7702224 YP_002757237.1 CDS Lm4b_00527 NC_012488.1 536645 537295 D ribulose-5-phosphate 3-epimerase 536645..537295 Listeria monocytogenes serotype 4b str. CLIP 80459 7702225 YP_002757238.1 CDS Lm4b_00528 NC_012488.1 537292 538338 D polyol (sorbitol) dehydrogenase 537292..538338 Listeria monocytogenes serotype 4b str. CLIP 80459 7702226 YP_002757239.1 CDS Lm4b_00529 NC_012488.1 538354 538647 D PTS system, Galactitol-specific IIB component 538354..538647 Listeria monocytogenes serotype 4b str. CLIP 80459 7702227 YP_002757240.1 CDS Lm4b_00530 NC_012488.1 538662 539933 D PTS system, Galactitol-specific IIC component 538662..539933 Listeria monocytogenes serotype 4b str. CLIP 80459 7702228 YP_002757241.1 CDS prs NC_012488.1 540073 541008 D phosphoribosyl pyrophosphate synthetase 540073..541008 Listeria monocytogenes serotype 4b str. CLIP 80459 7702229 YP_002757242.1 CDS Lm4b_00532 NC_012488.1 541629 542207 D hypothetical protein 541629..542207 Listeria monocytogenes serotype 4b str. CLIP 80459 7704074 YP_002757243.1 CDS Lm4b_00533 NC_012488.1 542314 542994 D hypothetical protein 542314..542994 Listeria monocytogenes serotype 4b str. CLIP 80459 7702230 YP_002757244.1 CDS Lm4b_00534b NC_012488.1 543019 543378 R hypothetical protein complement(543019..543378) Listeria monocytogenes serotype 4b str. CLIP 80459 7702231 YP_002757245.1 CDS Lm4b_00535 NC_012488.1 543385 543843 R transcription regulator complement(543385..543843) Listeria monocytogenes serotype 4b str. CLIP 80459 7702232 YP_002757246.1 CDS Lm4b_00536 NC_012488.1 544225 546054 D internalin 544225..546054 Listeria monocytogenes serotype 4b str. CLIP 80459 7702233 YP_002757247.1 CDS Lm4b_00537 NC_012488.1 546155 546586 D hypothetical protein 546155..546586 Listeria monocytogenes serotype 4b str. CLIP 80459 7702235 YP_002757248.1 CDS Lm4b_00538 NC_012488.1 546633 548063 R encapsulation protein CapA complement(546633..548063) Listeria monocytogenes serotype 4b str. CLIP 80459 7702236 YP_002757249.1 CDS Lm4b_00539 NC_012488.1 548184 548999 R phosphoglycerate mutase complement(548184..548999) Listeria monocytogenes serotype 4b str. CLIP 80459 7702237 YP_002757250.1 CDS Lm4b_00540 NC_012488.1 549280 549648 R hypothetical protein complement(549280..549648) Listeria monocytogenes serotype 4b str. CLIP 80459 7702238 YP_002757251.1 CDS Lm4b_00541 NC_012488.1 549795 551210 D multidrug resistance protein 549795..551210 Listeria monocytogenes serotype 4b str. CLIP 80459 7702239 YP_002757252.1 CDS Lm4b_00542 NC_012488.1 551341 552345 D transcription regulator 551341..552345 Listeria monocytogenes serotype 4b str. CLIP 80459 7702240 YP_002757253.1 CDS Lm4b_00543 NC_012488.1 552623 555610 D HsdR type IC restriction subunit 552623..555610 Listeria monocytogenes serotype 4b str. CLIP 80459 7704220 YP_002757254.1 CDS Lm4b_00544 NC_012488.1 555658 557247 D HsdM type IC modification subunit 555658..557247 Listeria monocytogenes serotype 4b str. CLIP 80459 7704222 YP_002757255.1 CDS Lm4b_00545 NC_012488.1 557244 558488 D specificity determinant HsdS 557244..558488 Listeria monocytogenes serotype 4b str. CLIP 80459 7704224 YP_002757256.1 CDS Lm4b_00546 NC_012488.1 558528 559457 R bacteriophage integrase complement(558528..559457) Listeria monocytogenes serotype 4b str. CLIP 80459 7704225 YP_002757257.1 CDS Lm4b_00547b NC_012488.1 559542 560744 R specificity determinant HsdS complement(559542..560744) Listeria monocytogenes serotype 4b str. CLIP 80459 7704226 YP_002757258.1 CDS Lm4b_00548b NC_012488.1 560791 562107 R 6-phospho-beta-glucosidase complement(560791..562107) Listeria monocytogenes serotype 4b str. CLIP 80459 7704228 YP_002757259.1 CDS Lm4b_00549 NC_012488.1 562309 563061 D transcription regulator 562309..563061 Listeria monocytogenes serotype 4b str. CLIP 80459 7704230 YP_002757260.1 CDS Lm4b_00550 NC_012488.1 563168 563611 D YybC protein 563168..563611 Listeria monocytogenes serotype 4b str. CLIP 80459 7704231 YP_002757261.1 CDS Lm4b_00551 NC_012488.1 563657 565318 R sulfate transporter complement(563657..565318) Listeria monocytogenes serotype 4b str. CLIP 80459 7704232 YP_002757262.1 CDS Lm4b_00552 NC_012488.1 565458 566198 R transcription regulator (MerR family) complement(565458..566198) Listeria monocytogenes serotype 4b str. CLIP 80459 7704233 YP_002757263.1 CDS Lm4b_00553 NC_012488.1 566428 567903 D hypothetical protein 566428..567903 Listeria monocytogenes serotype 4b str. CLIP 80459 7704234 YP_002757264.1 CDS Lm4b_00554 NC_012488.1 567896 569392 D hypothetical protein 567896..569392 Listeria monocytogenes serotype 4b str. CLIP 80459 7704235 YP_002757265.1 CDS Lm4b_00555 NC_012488.1 569403 570653 D glucosaminyltransferase 569403..570653 Listeria monocytogenes serotype 4b str. CLIP 80459 7704236 YP_002757266.1 CDS Lm4b_00556 NC_012488.1 570669 572720 D hypothetical protein 570669..572720 Listeria monocytogenes serotype 4b str. CLIP 80459 7704237 YP_002757267.1 CDS Lm4b_00557 NC_012488.1 572735 573589 D hypothetical protein 572735..573589 Listeria monocytogenes serotype 4b str. CLIP 80459 7704238 YP_002757268.1 CDS Lm4b_00558 NC_012488.1 573649 574479 D hypothetical protein 573649..574479 Listeria monocytogenes serotype 4b str. CLIP 80459 7704239 YP_002757269.1 CDS Lm4b_00559 NC_012488.1 574557 574826 D ACT domain-containing protein; hypothetical protein 574557..574826 Listeria monocytogenes serotype 4b str. CLIP 80459 7704240 YP_002757270.1 CDS Lm4b_00560 NC_012488.1 574845 576200 D hypothetical protein 574845..576200 Listeria monocytogenes serotype 4b str. CLIP 80459 7704241 YP_002757271.1 CDS Lm4b_00561 NC_012488.1 576240 577208 R transcription regulator LacI complement(576240..577208) Listeria monocytogenes serotype 4b str. CLIP 80459 7704242 YP_002757272.1 CDS Lm4b_00562 NC_012488.1 577380 578702 D 6-phospho-beta-glucosidase 577380..578702 Listeria monocytogenes serotype 4b str. CLIP 80459 7704243 YP_002757273.1 CDS Lm4b_00563 NC_012488.1 578806 580077 D allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 578806..580077 Listeria monocytogenes serotype 4b str. CLIP 80459 7704244 YP_002757274.1 CDS Lm4b_00564 NC_012488.1 580043 581218 D N-acyl-L-amino acid amidohydrolase 580043..581218 Listeria monocytogenes serotype 4b str. CLIP 80459 7704245 YP_002757275.1 CDS Lm4b_00565 NC_012488.1 581267 582283 R catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase, encoded by lacD1 and lacD2; expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources; tagatose 1,6-diphosphate aldolase complement(581267..582283) Listeria monocytogenes serotype 4b str. CLIP 80459 7704246 YP_002757276.1 CDS Lm4b_00566 NC_012488.1 582520 583713 D penicillin-binding protein 582520..583713 Listeria monocytogenes serotype 4b str. CLIP 80459 7704247 YP_002757277.1 CDS Lm4b_00567 NC_012488.1 583754 584674 R ABC transporter (binding protein) complement(583754..584674) Listeria monocytogenes serotype 4b str. CLIP 80459 7704248 YP_002757278.1 CDS Lm4b_00568 NC_012488.1 584785 585135 R PTS system, glucitol/sorbitol-specific enzyme IIA component complement(584785..585135) Listeria monocytogenes serotype 4b str. CLIP 80459 7704249 YP_002757279.1 CDS Lm4b_00569 NC_012488.1 585154 586140 R PTS system, glucitol/sorbitol-specific enzyme IIBC component complement(585154..586140) Listeria monocytogenes serotype 4b str. CLIP 80459 7704250 YP_002757280.1 CDS Lm4b_00570 NC_012488.1 586161 586682 R PTS system, glucitol/sorbitol-specific enzyme II CII component complement(586161..586682) Listeria monocytogenes serotype 4b str. CLIP 80459 7704251 YP_002757281.1 CDS Lm4b_00571 NC_012488.1 586707 587087 R hypothetical protein complement(586707..587087) Listeria monocytogenes serotype 4b str. CLIP 80459 7704252 YP_002757282.1 CDS Lm4b_00572 NC_012488.1 587142 588392 R NAD(P)-dependent oxidoreductase complement(587142..588392) Listeria monocytogenes serotype 4b str. CLIP 80459 7704253 YP_002757283.1 CDS Lm4b_00573 NC_012488.1 588650 589597 R DeoR transcriptional regulator complement(588650..589597) Listeria monocytogenes serotype 4b str. CLIP 80459 7704254 YP_002757284.1 CDS Lm4b_00574 NC_012488.1 589965 590630 D hypothetical protein 589965..590630 Listeria monocytogenes serotype 4b str. CLIP 80459 7704255 YP_002757285.1 CDS Lm4b_00575 NC_012488.1 590648 592672 D internalin protein 590648..592672 Listeria monocytogenes serotype 4b str. CLIP 80459 7704256 YP_002757286.1 CDS Lm4b_00576 NC_012488.1 592712 593008 D cell surface protein 592712..593008 Listeria monocytogenes serotype 4b str. CLIP 80459 7704257 YP_002757287.1 CDS Lm4b_00577 NC_012488.1 593052 593894 D hypothetical protein 593052..593894 Listeria monocytogenes serotype 4b str. CLIP 80459 7704258 YP_002757288.1 CDS Lm4b_00578 NC_012488.1 593970 595001 D hypothetical protein 593970..595001 Listeria monocytogenes serotype 4b str. CLIP 80459 7704259 YP_002757289.1 CDS Lm4b_00579 NC_012488.1 595058 595693 R hypothetical protein complement(595058..595693) Listeria monocytogenes serotype 4b str. CLIP 80459 7704260 YP_002757290.1 CDS Lm4b_00580 NC_012488.1 595903 597084 D NADH-dependent butanol dehydrogenase 595903..597084 Listeria monocytogenes serotype 4b str. CLIP 80459 7704261 YP_002757291.1 CDS Lm4b_00581 NC_012488.1 597174 598652 D di-tripeptide transporter 597174..598652 Listeria monocytogenes serotype 4b str. CLIP 80459 7704262 YP_002757292.1 CDS Lm4b_00582 NC_012488.1 598781 599488 D phosphoglycerate mutase 598781..599488 Listeria monocytogenes serotype 4b str. CLIP 80459 7704263 YP_002757293.1 CDS Lm4b_00583 NC_012488.1 599489 600184 D phosphoglycerate mutase 599489..600184 Listeria monocytogenes serotype 4b str. CLIP 80459 7704264 YP_002757294.1 CDS Lm4b_00584 NC_012488.1 600226 601266 R hypothetical protein complement(600226..601266) Listeria monocytogenes serotype 4b str. CLIP 80459 7704265 YP_002757295.1 CDS Lm4b_00585 NC_012488.1 601666 602571 D membrane protein 601666..602571 Listeria monocytogenes serotype 4b str. CLIP 80459 7704266 YP_002757296.1 CDS Lm4b_00586 NC_012488.1 602614 603990 R converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase complement(602614..603990) Listeria monocytogenes serotype 4b str. CLIP 80459 7704267 YP_002757297.1 CDS hisE NC_012488.1 604483 604794 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase complement(604483..604794) Listeria monocytogenes serotype 4b str. CLIP 80459 7704268 YP_002757298.1 CDS hisI NC_012488.1 604795 605112 R PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase complement(604795..605112) Listeria monocytogenes serotype 4b str. CLIP 80459 7704269 YP_002757299.1 CDS hisF NC_012488.1 605109 605864 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(605109..605864) Listeria monocytogenes serotype 4b str. CLIP 80459 7704270 YP_002757300.1 CDS hisA NC_012488.1 605854 606576 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(605854..606576) Listeria monocytogenes serotype 4b str. CLIP 80459 7702492 YP_002757301.1 CDS hisH NC_012488.1 606555 607181 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(606555..607181) Listeria monocytogenes serotype 4b str. CLIP 80459 7702488 YP_002757302.1 CDS hisB NC_012488.1 607182 607766 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(607182..607766) Listeria monocytogenes serotype 4b str. CLIP 80459 7702494 YP_002757303.1 CDS hisD NC_012488.1 607767 609050 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(607767..609050) Listeria monocytogenes serotype 4b str. CLIP 80459 7702489 YP_002757304.1 CDS hisG NC_012488.1 609047 609688 R short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit complement(609047..609688) Listeria monocytogenes serotype 4b str. CLIP 80459 7702491 YP_002757305.1 CDS hisZ NC_012488.1 609688 610866 R May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit complement(609688..610866) Listeria monocytogenes serotype 4b str. CLIP 80459 7702493 YP_002757306.1 CDS hisJ NC_012488.1 611018 611845 D catalyzes the formation of L-histidinol from L-histidinol phosphate; histidinol-phosphatase 611018..611845 Listeria monocytogenes serotype 4b str. CLIP 80459 7702497 YP_002757307.1 CDS Lm4b_00597 NC_012488.1 611830 612126 R methyltransferase complement(611830..612126) Listeria monocytogenes serotype 4b str. CLIP 80459 7702495 YP_002757308.1 CDS Lm4b_00598 NC_012488.1 612203 613234 D hypothetical protein 612203..613234 Listeria monocytogenes serotype 4b str. CLIP 80459 7704271 YP_002757309.1 CDS Lm4b_00599 NC_012488.1 613277 614572 R hypothetical protein complement(613277..614572) Listeria monocytogenes serotype 4b str. CLIP 80459 7704272 YP_002757310.1 CDS Lm4b_00600 NC_012488.1 614888 616282 D beta-glucosidase 614888..616282 Listeria monocytogenes serotype 4b str. CLIP 80459 7704273 YP_002757311.1 CDS Lm4b_00601 NC_012488.1 616326 617054 D GntR family transcriptional regulator 616326..617054 Listeria monocytogenes serotype 4b str. CLIP 80459 7704274 YP_002757312.1 CDS Lm4b_00602 NC_012488.1 617503 618966 D hypothetical protein 617503..618966 Listeria monocytogenes serotype 4b str. CLIP 80459 7704275 YP_002757313.1 CDS Lm4b_00603 NC_012488.1 619021 619479 R hypothetical protein complement(619021..619479) Listeria monocytogenes serotype 4b str. CLIP 80459 7704276 YP_002757314.1 CDS Lm4b_00604 NC_012488.1 619493 620245 R hypothetical protein complement(619493..620245) Listeria monocytogenes serotype 4b str. CLIP 80459 7704277 YP_002757315.1 CDS Lm4b_00605 NC_012488.1 620410 620619 D hypothetical protein 620410..620619 Listeria monocytogenes serotype 4b str. CLIP 80459 7704278 YP_002757316.1 CDS Lm4b_00606 NC_012488.1 620641 621297 D carboxylesterase 620641..621297 Listeria monocytogenes serotype 4b str. CLIP 80459 7704279 YP_002757317.1 CDS Lm4b_00607 NC_012488.1 621328 622512 R hypothetical protein complement(621328..622512) Listeria monocytogenes serotype 4b str. CLIP 80459 7704280 YP_002757318.1 CDS iap NC_012488.1 622600 624033 R iap; p60; autolytic enzyme; can cleave bacterial peptidoglycan; secreted by SecA2 system; invasion associated secreted endopeptidase complement(622600..624033) Listeria monocytogenes serotype 4b str. CLIP 80459 7704281 YP_002757319.1 CDS Lm4b_00609 NC_012488.1 624452 626782 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, especially gram positive pathogens, have paralogs that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 624452..626782 Listeria monocytogenes serotype 4b str. CLIP 80459 7702502 YP_002757320.1 CDS Lm4b_00610 NC_012488.1 626898 628070 D hypothetical protein 626898..628070 Listeria monocytogenes serotype 4b str. CLIP 80459 7704282 YP_002757321.1 CDS Lm4b_00611 NC_012488.1 628328 629041 D secreted protein 628328..629041 Listeria monocytogenes serotype 4b str. CLIP 80459 7704283 YP_002757322.1 CDS Lm4b_00612 NC_012488.1 629109 630134 D hypothetical protein 629109..630134 Listeria monocytogenes serotype 4b str. CLIP 80459 7704284 YP_002757323.1 CDS Lm4b_00613 NC_012488.1 630152 632617 D secreted protein 630152..632617 Listeria monocytogenes serotype 4b str. CLIP 80459 7704285 YP_002757324.1 CDS Lm4b_00614 NC_012488.1 632729 634132 D DNA photolyase 632729..634132 Listeria monocytogenes serotype 4b str. CLIP 80459 7704286 YP_002757325.1 CDS Lm4b_00615 NC_012488.1 634270 634683 D hypothetical protein 634270..634683 Listeria monocytogenes serotype 4b str. CLIP 80459 7704287 YP_002757326.1 CDS Lm4b_00616b NC_012488.1 634686 636452 D hypothetical protein 634686..636452 Listeria monocytogenes serotype 4b str. CLIP 80459 7704289 YP_002757327.1 CDS Lm4b_00617b NC_012488.1 636452 637222 D membrane protein 636452..637222 Listeria monocytogenes serotype 4b str. CLIP 80459 7704291 YP_002757328.1 CDS Lm4b_00618 NC_012488.1 637350 637892 D hypothetical protein 637350..637892 Listeria monocytogenes serotype 4b str. CLIP 80459 7704292 YP_002757329.1 CDS Lm4b_00619 NC_012488.1 638119 638919 D transport protein 638119..638919 Listeria monocytogenes serotype 4b str. CLIP 80459 7704293 YP_002757330.1 CDS metX NC_012488.1 638957 640063 R Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase complement(638957..640063) Listeria monocytogenes serotype 4b str. CLIP 80459 7704294 YP_002757331.1 CDS Lm4b_00621 NC_012488.1 640080 641357 R hypothetical protein complement(640080..641357) Listeria monocytogenes serotype 4b str. CLIP 80459 7704295 YP_002757332.1 CDS Lm4b_00622 NC_012488.1 641805 642332 D hypothetical protein 641805..642332 Listeria monocytogenes serotype 4b str. CLIP 80459 7704296 YP_002757333.1 CDS Lm4b_00623 NC_012488.1 642421 643122 R transcription regulator CRP/FNR family complement(642421..643122) Listeria monocytogenes serotype 4b str. CLIP 80459 7704297 YP_002757334.1 CDS Lm4b_00624 NC_012488.1 643198 643746 R protein involved in biotin metabolism (BioY) complement(643198..643746) Listeria monocytogenes serotype 4b str. CLIP 80459 7704298 YP_002757335.1 CDS Lm4b_00625 NC_012488.1 643940 644272 D hypothetical protein 643940..644272 Listeria monocytogenes serotype 4b str. CLIP 80459 7704299 YP_002757336.1 CDS Lm4b_00626 NC_012488.1 644265 644855 D hypothetical protein 644265..644855 Listeria monocytogenes serotype 4b str. CLIP 80459 7704300 YP_002757337.1 CDS Lm4b_00627 NC_012488.1 644848 645948 D cell surface protein 644848..645948 Listeria monocytogenes serotype 4b str. CLIP 80459 7704301 YP_002757338.1 CDS Lm4b_00628 NC_012488.1 646054 646554 D transcription regulator 646054..646554 Listeria monocytogenes serotype 4b str. CLIP 80459 7704302 YP_002757339.1 CDS Lm4b_00629 NC_012488.1 646602 646988 R hypothetical protein complement(646602..646988) Listeria monocytogenes serotype 4b str. CLIP 80459 7702717 YP_002757340.1 CDS Lm4b_00630 NC_012488.1 647041 647385 R YvlA protein complement(647041..647385) Listeria monocytogenes serotype 4b str. CLIP 80459 7701925 YP_002757341.1 CDS Lm4b_00631 NC_012488.1 647534 648874 R hypothetical protein complement(647534..648874) Listeria monocytogenes serotype 4b str. CLIP 80459 7701926 YP_002757342.1 CDS Lm4b_00632 NC_012488.1 649040 649501 D transcription regulator MarR family 649040..649501 Listeria monocytogenes serotype 4b str. CLIP 80459 7701927 YP_002757343.1 CDS Lm4b_00633 NC_012488.1 649521 651233 D ABC transporter ATP-binding protein 649521..651233 Listeria monocytogenes serotype 4b str. CLIP 80459 7701928 YP_002757344.1 CDS Lm4b_00634 NC_012488.1 651230 653047 D ABC transporter ATP-binding protein 651230..653047 Listeria monocytogenes serotype 4b str. CLIP 80459 7701929 YP_002757345.1 CDS Lm4b_00635 NC_012488.1 653164 653463 D phage shock protein E 653164..653463 Listeria monocytogenes serotype 4b str. CLIP 80459 7701930 YP_002757346.1 CDS Lm4b_00636 NC_012488.1 653505 655274 R internalin protein complement(653505..655274) Listeria monocytogenes serotype 4b str. CLIP 80459 7701931 YP_002757347.1 CDS Lm4b_00637 NC_012488.1 655435 656061 R FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase complement(655435..656061) Listeria monocytogenes serotype 4b str. CLIP 80459 7701932 YP_002757348.1 CDS Lm4b_00638 NC_012488.1 656230 656679 D transcription regulator MarR family 656230..656679 Listeria monocytogenes serotype 4b str. CLIP 80459 7701933 YP_002757349.1 CDS Lm4b_00639 NC_012488.1 656682 657623 D oxidoreductase 656682..657623 Listeria monocytogenes serotype 4b str. CLIP 80459 7701934 YP_002757350.1 CDS Lm4b_00640 NC_012488.1 657733 658251 D hypothetical protein 657733..658251 Listeria monocytogenes serotype 4b str. CLIP 80459 7701935 YP_002757351.1 CDS Lm4b_00641 NC_012488.1 658248 658490 R hypothetical protein complement(658248..658490) Listeria monocytogenes serotype 4b str. CLIP 80459 7701936 YP_002757352.1 CDS Lm4b_00642 NC_012488.1 658597 660348 D hypothetical protein 658597..660348 Listeria monocytogenes serotype 4b str. CLIP 80459 7701937 YP_002757353.1 CDS Lm4b_00643 NC_012488.1 660387 660881 R hypothetical protein complement(660387..660881) Listeria monocytogenes serotype 4b str. CLIP 80459 7701939 YP_002757354.1 CDS Lm4b_00644 NC_012488.1 660961 662103 R protein kinase complement(660961..662103) Listeria monocytogenes serotype 4b str. CLIP 80459 7701940 YP_002757355.1 CDS Lm4b_00645 NC_012488.1 662210 662665 D hypothetical protein 662210..662665 Listeria monocytogenes serotype 4b str. CLIP 80459 7701941 YP_002757356.1 CDS Lm4b_00646 NC_012488.1 662721 663113 D hypothetical protein 662721..663113 Listeria monocytogenes serotype 4b str. CLIP 80459 7701942 YP_002757357.1 CDS Lm4b_00647 NC_012488.1 663210 663950 D hypothetical protein 663210..663950 Listeria monocytogenes serotype 4b str. CLIP 80459 7701943 YP_002757358.1 CDS Lm4b_00648 NC_012488.1 664036 664314 D hypothetical protein 664036..664314 Listeria monocytogenes serotype 4b str. CLIP 80459 7701944 YP_002757359.1 CDS Lm4b_00649 NC_012488.1 664331 664609 D hypothetical protein 664331..664609 Listeria monocytogenes serotype 4b str. CLIP 80459 7701945 YP_002757360.1 CDS Lm4b_00650 NC_012488.1 664637 665080 R hypothetical protein complement(664637..665080) Listeria monocytogenes serotype 4b str. CLIP 80459 7701946 YP_002757361.1 CDS Lm4b_00651 NC_012488.1 665111 665812 R hypothetical protein complement(665111..665812) Listeria monocytogenes serotype 4b str. CLIP 80459 7701947 YP_002757362.1 CDS Lm4b_00652 NC_012488.1 665897 667576 R hypothetical protein complement(665897..667576) Listeria monocytogenes serotype 4b str. CLIP 80459 7701948 YP_002757363.1 CDS Lm4b_00653 NC_012488.1 667879 672663 D adhesin 667879..672663 Listeria monocytogenes serotype 4b str. CLIP 80459 7701949 YP_002757364.1 CDS Lm4b_00654 NC_012488.1 672760 673035 D hypothetical protein 672760..673035 Listeria monocytogenes serotype 4b str. CLIP 80459 7701950 YP_002757365.1 CDS Lm4b_00655 NC_012488.1 673078 673605 D hypothetical protein 673078..673605 Listeria monocytogenes serotype 4b str. CLIP 80459 7701951 YP_002757366.1 CDS Lm4b_00656 NC_012488.1 673691 674395 D hypothetical protein 673691..674395 Listeria monocytogenes serotype 4b str. CLIP 80459 7701952 YP_002757367.1 CDS Lm4b_00657 NC_012488.1 674500 674916 D hypothetical protein 674500..674916 Listeria monocytogenes serotype 4b str. CLIP 80459 7701953 YP_002757368.1 CDS Lm4b_00658 NC_012488.1 674929 675522 D methyltransferase 674929..675522 Listeria monocytogenes serotype 4b str. CLIP 80459 7701954 YP_002757369.1 CDS Lm4b_00659 NC_012488.1 676222 676893 D hypothetical protein 676222..676893 Listeria monocytogenes serotype 4b str. CLIP 80459 7703440 YP_002757370.1 CDS Lm4b_00660 NC_012488.1 677649 678182 D transcription regulator (surface protein PAg negative regulator par) 677649..678182 Listeria monocytogenes serotype 4b str. CLIP 80459 7701956 YP_002757371.1 CDS Lm4b_00661 NC_012488.1 678246 679163 D oxidoreductase 678246..679163 Listeria monocytogenes serotype 4b str. CLIP 80459 7701957 YP_002757372.1 CDS Lm4b_00662 NC_012488.1 679429 681309 D heavy metal-transporting ATPase 679429..681309 Listeria monocytogenes serotype 4b str. CLIP 80459 7701958 YP_002757373.1 CDS Lm4b_00663 NC_012488.1 681404 682132 D hypothetical protein 681404..682132 Listeria monocytogenes serotype 4b str. CLIP 80459 7701959 YP_002757374.1 CDS Lm4b_00664 NC_012488.1 682272 682922 D transaldolase 682272..682922 Listeria monocytogenes serotype 4b str. CLIP 80459 7701960 YP_002757375.1 CDS Lm4b_00665 NC_012488.1 682965 684785 R hypothetical protein complement(682965..684785) Listeria monocytogenes serotype 4b str. CLIP 80459 7701961 YP_002757376.1 CDS Lm4b_00666 NC_012488.1 685020 686411 D amino acid transporter 685020..686411 Listeria monocytogenes serotype 4b str. CLIP 80459 7701962 YP_002757377.1 CDS Lm4b_00667 NC_012488.1 686501 687340 D hypothetical protein 686501..687340 Listeria monocytogenes serotype 4b str. CLIP 80459 7701963 YP_002757378.1 CDS Lm4b_00668 NC_012488.1 687423 687707 R hypothetical protein complement(687423..687707) Listeria monocytogenes serotype 4b str. CLIP 80459 7701964 YP_002757379.1 CDS Lm4b_00669 NC_012488.1 687805 688755 D membrane protein 687805..688755 Listeria monocytogenes serotype 4b str. CLIP 80459 7701965 YP_002757380.1 CDS Lm4b_00670 NC_012488.1 688779 689420 D transcription regulator 688779..689420 Listeria monocytogenes serotype 4b str. CLIP 80459 7701966 YP_002757381.1 CDS Lm4b_00671 NC_012488.1 689463 692153 D hypothetical protein 689463..692153 Listeria monocytogenes serotype 4b str. CLIP 80459 7701967 YP_002757382.1 CDS Lm4b_00672 NC_012488.1 692199 692846 D transcription regulator 692199..692846 Listeria monocytogenes serotype 4b str. CLIP 80459 7701968 YP_002757383.1 CDS Lm4b_00673 NC_012488.1 692856 693392 R hypothetical protein complement(692856..693392) Listeria monocytogenes serotype 4b str. CLIP 80459 7701969 YP_002757384.1 CDS Lm4b_00674 NC_012488.1 693379 694371 R hypothetical protein complement(693379..694371) Listeria monocytogenes serotype 4b str. CLIP 80459 7701970 YP_002757385.1 CDS Lm4b_00675 NC_012488.1 694562 694771 D hypothetical protein 694562..694771 Listeria monocytogenes serotype 4b str. CLIP 80459 7701971 YP_002757386.1 CDS Lm4b_00676 NC_012488.1 694839 695546 D phosphoprotein phosphatase 694839..695546 Listeria monocytogenes serotype 4b str. CLIP 80459 7701972 YP_002757387.1 CDS Lm4b_00677 NC_012488.1 695592 696155 R hypothetical protein complement(695592..696155) Listeria monocytogenes serotype 4b str. CLIP 80459 7701973 YP_002757388.1 CDS Lm4b_00678 NC_012488.1 696275 696691 D hypothetical protein 696275..696691 Listeria monocytogenes serotype 4b str. CLIP 80459 7701974 YP_002757389.1 CDS Lm4b_00679 NC_012488.1 697249 698418 D type II DNA modification enzyme (methyltransferase) 697249..698418 Listeria monocytogenes serotype 4b str. CLIP 80459 7701975 YP_002757390.1 CDS Lm4b_00680 NC_012488.1 698451 700592 D hypothetical protein 698451..700592 Listeria monocytogenes serotype 4b str. CLIP 80459 7701976 YP_002757391.1 CDS Lm4b_00681 NC_012488.1 700589 701581 D hypothetical protein 700589..701581 Listeria monocytogenes serotype 4b str. CLIP 80459 7701977 YP_002757392.1 CDS Lm4b_00682 NC_012488.1 701829 702458 D hypothetical protein 701829..702458 Listeria monocytogenes serotype 4b str. CLIP 80459 7701978 YP_002757393.1 CDS Lm4b_00683 NC_012488.1 702455 703351 R transcription regulator (Rgg type) complement(702455..703351) Listeria monocytogenes serotype 4b str. CLIP 80459 7701979 YP_002757394.1 CDS Lm4b_00684 NC_012488.1 703585 703866 D transposase 703585..703866 Listeria monocytogenes serotype 4b str. CLIP 80459 7701980 YP_002757395.1 CDS Lm4b_00685 NC_012488.1 704144 706618 D peptidoglycan linked protein (LPxTG) 704144..706618 Listeria monocytogenes serotype 4b str. CLIP 80459 7701982 YP_002757396.1 CDS Lm4b_00686 NC_012488.1 706802 707470 D hypothetical protein 706802..707470 Listeria monocytogenes serotype 4b str. CLIP 80459 7701983 YP_002757397.1 CDS Lm4b_00687b NC_012488.1 707659 709275 D peptidoglycan bound protein (LPXTG motif) 707659..709275 Listeria monocytogenes serotype 4b str. CLIP 80459 7701984 YP_002757398.1 CDS Lm4b_00688b NC_012488.1 709361 709669 R hypothetical protein complement(709361..709669) Listeria monocytogenes serotype 4b str. CLIP 80459 7701986 YP_002757399.1 CDS thiD NC_012488.1 709732 710547 R phosphomethylpyrimidine kinase thiD complement(709732..710547) Listeria monocytogenes serotype 4b str. CLIP 80459 7701988 YP_002757400.1 CDS Lm4b_00690 NC_012488.1 710573 711439 R hypothetical protein complement(710573..711439) Listeria monocytogenes serotype 4b str. CLIP 80459 7701597 YP_002757401.1 CDS Lm4b_00691 NC_012488.1 711613 712176 D acetyl transferase 711613..712176 Listeria monocytogenes serotype 4b str. CLIP 80459 7701989 YP_002757402.1 CDS Lm4b_00692 NC_012488.1 712173 712436 D hypothetical protein 712173..712436 Listeria monocytogenes serotype 4b str. CLIP 80459 7701990 YP_002757403.1 CDS Lm4b_00693 NC_012488.1 712446 712823 D hypothetical protein 712446..712823 Listeria monocytogenes serotype 4b str. CLIP 80459 7701991 YP_002757404.1 CDS Lm4b_00694 NC_012488.1 712937 713872 D ABC transporter ATP-binding protein 712937..713872 Listeria monocytogenes serotype 4b str. CLIP 80459 7701992 YP_002757405.1 CDS Lm4b_00695 NC_012488.1 713865 714635 D ABC transporter permease 713865..714635 Listeria monocytogenes serotype 4b str. CLIP 80459 7701993 YP_002757406.1 CDS Lm4b_00696 NC_012488.1 714895 715779 D oxidoreductase 714895..715779 Listeria monocytogenes serotype 4b str. CLIP 80459 7701994 YP_002757407.1 CDS Lm4b_00697 NC_012488.1 715797 715973 D hypothetical protein 715797..715973 Listeria monocytogenes serotype 4b str. CLIP 80459 7701995 YP_002757408.1 CDS Lm4b_00698 NC_012488.1 716098 716706 D hypothetical protein 716098..716706 Listeria monocytogenes serotype 4b str. CLIP 80459 7701996 YP_002757409.1 CDS Lm4b_00699 NC_012488.1 716878 717105 R hypothetical protein complement(716878..717105) Listeria monocytogenes serotype 4b str. CLIP 80459 7701997 YP_002757410.1 CDS Lm4b_00700 NC_012488.1 717617 718045 D hypothetical protein 717617..718045 Listeria monocytogenes serotype 4b str. CLIP 80459 7701998 YP_002757411.1 CDS Lm4b_00701 NC_012488.1 718084 718293 R hypothetical protein complement(718084..718293) Listeria monocytogenes serotype 4b str. CLIP 80459 7701999 YP_002757412.1 CDS Lm4b_00702 NC_012488.1 718312 719232 R hypothetical protein complement(718312..719232) Listeria monocytogenes serotype 4b str. CLIP 80459 7702000 YP_002757413.1 CDS Lm4b_00703 NC_012488.1 719604 719918 D hypothetical protein 719604..719918 Listeria monocytogenes serotype 4b str. CLIP 80459 7702001 YP_002757414.1 CDS fliP NC_012488.1 719911 720678 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 719911..720678 Listeria monocytogenes serotype 4b str. CLIP 80459 7702002 YP_002757415.1 CDS fliQ NC_012488.1 720691 720963 D with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 720691..720963 Listeria monocytogenes serotype 4b str. CLIP 80459 7702003 YP_002757416.1 CDS fliR NC_012488.1 720966 721727 D FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 720966..721727 Listeria monocytogenes serotype 4b str. CLIP 80459 7702004 YP_002757417.1 CDS flhB NC_012488.1 721743 722789 D membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 721743..722789 Listeria monocytogenes serotype 4b str. CLIP 80459 7702005 YP_002757418.1 CDS flhA NC_012488.1 722836 724911 D membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 722836..724911 Listeria monocytogenes serotype 4b str. CLIP 80459 7702078 YP_002757419.1 CDS Lm4b_00709 NC_012488.1 724933 726156 D Positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 724933..726156 Listeria monocytogenes serotype 4b str. CLIP 80459 7703767 YP_002757420.1 CDS flgG NC_012488.1 726153 726932 D makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 726153..726932 Listeria monocytogenes serotype 4b str. CLIP 80459 7703768 YP_002757421.1 CDS Lm4b_00711 NC_012488.1 726961 727749 D chemotactic methyltransferase CheR 726961..727749 Listeria monocytogenes serotype 4b str. CLIP 80459 7703769 YP_002757422.1 CDS Lm4b_00712 NC_012488.1 727774 728109 D hypothetical protein 727774..728109 Listeria monocytogenes serotype 4b str. CLIP 80459 7703770 YP_002757423.1 CDS Lm4b_00713 NC_012488.1 728136 728987 D With Mot B forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.; flagellar motor protein MotA 728136..728987 Listeria monocytogenes serotype 4b str. CLIP 80459 7703771 YP_002757424.1 CDS motB NC_012488.1 728947 729774 D motility protein (flagellar motor rotation) MotB 728947..729774 Listeria monocytogenes serotype 4b str. CLIP 80459 7703772 YP_002757425.1 CDS Lm4b_00715 NC_012488.1 729784 730284 D hypothetical protein 729784..730284 Listeria monocytogenes serotype 4b str. CLIP 80459 7702560 YP_002757426.1 CDS Lm4b_00716 NC_012488.1 730307 732220 D hypothetical protein 730307..732220 Listeria monocytogenes serotype 4b str. CLIP 80459 7703773 YP_002757427.1 CDS Lm4b_00717 NC_012488.1 732233 733141 D CheA activity-modulating chemotaxis protein CheV 732233..733141 Listeria monocytogenes serotype 4b str. CLIP 80459 7703774 YP_002757428.1 CDS flaA NC_012488.1 733380 734243 D structural flagella protein; flagellin 733380..734243 Listeria monocytogenes serotype 4b str. CLIP 80459 7703775 YP_002757429.1 CDS cheY NC_012488.1 734518 734877 D Chemotaxis response regulator CheY 734518..734877 Listeria monocytogenes serotype 4b str. CLIP 80459 7702905 YP_002757430.1 CDS cheA NC_012488.1 734897 736753 D two-component sensor histidine kinase CheA 734897..736753 Listeria monocytogenes serotype 4b str. CLIP 80459 7703234 YP_002757431.1 CDS Lm4b_00721 NC_012488.1 736763 737065 D One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 736763..737065 Listeria monocytogenes serotype 4b str. CLIP 80459 7703233 YP_002757432.1 CDS Lm4b_00722 NC_012488.1 737084 737494 D hypothetical protein 737084..737494 Listeria monocytogenes serotype 4b str. CLIP 80459 7703776 YP_002757433.1 CDS Lm4b_00723 NC_012488.1 737510 738556 D hypothetical protein 737510..738556 Listeria monocytogenes serotype 4b str. CLIP 80459 7703777 YP_002757434.1 CDS flgD NC_012488.1 738558 738980 D acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; flagellar basal body rod modification protein 738558..738980 Listeria monocytogenes serotype 4b str. CLIP 80459 7703778 YP_002757435.1 CDS flgE NC_012488.1 739000 740235 D the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 739000..740235 Listeria monocytogenes serotype 4b str. CLIP 80459 7703779 YP_002757436.1 CDS Lm4b_00726 NC_012488.1 740249 740485 D One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 740249..740485 Listeria monocytogenes serotype 4b str. CLIP 80459 7703780 YP_002757437.1 CDS fliM NC_012488.1 740506 741498 D with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 740506..741498 Listeria monocytogenes serotype 4b str. CLIP 80459 7703781 YP_002757438.1 CDS Lm4b_00728 NC_012488.1 741501 743048 D One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 741501..743048 Listeria monocytogenes serotype 4b str. CLIP 80459 7703782 YP_002757439.1 CDS Lm4b_00729 NC_012488.1 743054 744457 D hypothetical protein 743054..744457 Listeria monocytogenes serotype 4b str. CLIP 80459 7703783 YP_002757440.1 CDS Lm4b_00730 NC_012488.1 744480 745646 D hypothetical protein 744480..745646 Listeria monocytogenes serotype 4b str. CLIP 80459 7703784 YP_002757441.1 CDS Lm4b_00731 NC_012488.1 745753 746217 D hypothetical protein 745753..746217 Listeria monocytogenes serotype 4b str. CLIP 80459 7703785 YP_002757442.1 CDS Lm4b_00732 NC_012488.1 746227 746655 D hypothetical protein 746227..746655 Listeria monocytogenes serotype 4b str. CLIP 80459 7703786 YP_002757443.1 CDS flgK NC_012488.1 746675 748195 D with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 746675..748195 Listeria monocytogenes serotype 4b str. CLIP 80459 7703787 YP_002757444.1 CDS flgL NC_012488.1 748207 749082 D with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgL 748207..749082 Listeria monocytogenes serotype 4b str. CLIP 80459 7703788 YP_002757445.1 CDS fliD NC_012488.1 749094 750383 D involved in flagellin assembly; flagellar capping protein 749094..750383 Listeria monocytogenes serotype 4b str. CLIP 80459 7703789 YP_002757446.1 CDS Lm4b_00736 NC_012488.1 750402 750788 D hypothetical flagellar protein 750402..750788 Listeria monocytogenes serotype 4b str. CLIP 80459 7703790 YP_002757447.1 CDS Lm4b_00737 NC_012488.1 750760 751041 D hypothetical protein 750760..751041 Listeria monocytogenes serotype 4b str. CLIP 80459 7703791 YP_002757448.1 CDS flgB NC_012488.1 751062 751463 D with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB 751062..751463 Listeria monocytogenes serotype 4b str. CLIP 80459 7703792 YP_002757449.1 CDS flgC NC_012488.1 751475 751885 D with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 751475..751885 Listeria monocytogenes serotype 4b str. CLIP 80459 7703793 YP_002757450.1 CDS fliE NC_012488.1 751902 752198 D forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 751902..752198 Listeria monocytogenes serotype 4b str. CLIP 80459 7703794 YP_002757451.1 CDS fliF NC_012488.1 752266 753918 D the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 752266..753918 Listeria monocytogenes serotype 4b str. CLIP 80459 7703795 YP_002757452.1 CDS fliG NC_012488.1 753921 755027 D One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 753921..755027 Listeria monocytogenes serotype 4b str. CLIP 80459 7703796 YP_002757453.1 CDS fliH NC_012488.1 755014 755706 D binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 755014..755706 Listeria monocytogenes serotype 4b str. CLIP 80459 7703797 YP_002757454.1 CDS fliI NC_012488.1 755703 757004 D involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 755703..757004 Listeria monocytogenes serotype 4b str. CLIP 80459 7703798 YP_002757455.1 CDS Lm4b_00745 NC_012488.1 757021 757689 D transglycosylase 757021..757689 Listeria monocytogenes serotype 4b str. CLIP 80459 7703799 YP_002757456.1 CDS Lm4b_00746 NC_012488.1 757703 758347 D hypothetical protein 757703..758347 Listeria monocytogenes serotype 4b str. CLIP 80459 7703800 YP_002757457.1 CDS Lm4b_00747 NC_012488.1 758466 758792 D hypothetical protein 758466..758792 Listeria monocytogenes serotype 4b str. CLIP 80459 7703801 YP_002757458.1 CDS Lm4b_00748 NC_012488.1 758792 759115 D hypothetical protein 758792..759115 Listeria monocytogenes serotype 4b str. CLIP 80459 7703802 YP_002757459.1 CDS Lm4b_00749 NC_012488.1 759158 759805 R fibronectin-binding protein complement(759158..759805) Listeria monocytogenes serotype 4b str. CLIP 80459 7703803 YP_002757460.1 CDS Lm4b_00750 NC_012488.1 760076 761806 D catalyzes the formation of acetyl phosphate from pyruvate; pyruvate oxidase 760076..761806 Listeria monocytogenes serotype 4b str. CLIP 80459 7703804 YP_002757461.1 CDS Lm4b_00751 NC_012488.1 761968 763773 D metyl-accepting chemotaxis protein 761968..763773 Listeria monocytogenes serotype 4b str. CLIP 80459 7703805 YP_002757462.1 CDS Lm4b_00752 NC_012488.1 763786 764514 D hypothetical protein 763786..764514 Listeria monocytogenes serotype 4b str. CLIP 80459 7703806 YP_002757463.1 CDS Lm4b_00753 NC_012488.1 764557 764769 R hypothetical protein complement(764557..764769) Listeria monocytogenes serotype 4b str. CLIP 80459 7703807 YP_002757464.1 CDS Lm4b_00754 NC_012488.1 765217 767022 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 765217..767022 Listeria monocytogenes serotype 4b str. CLIP 80459 7703808 YP_002757465.1 CDS Lm4b_00755 NC_012488.1 767135 767875 D riboflavin kinase / FAD synthase 767135..767875 Listeria monocytogenes serotype 4b str. CLIP 80459 7703809 YP_002757466.1 CDS Lm4b_00756 NC_012488.1 767958 768437 D hypothetical protein 767958..768437 Listeria monocytogenes serotype 4b str. CLIP 80459 7703810 YP_002757467.1 CDS Lm4b_00757 NC_012488.1 768451 768789 D hypothetical protein 768451..768789 Listeria monocytogenes serotype 4b str. CLIP 80459 7703811 YP_002757468.1 CDS Lm4b_00758 NC_012488.1 768934 769338 D hypothetical protein 768934..769338 Listeria monocytogenes serotype 4b str. CLIP 80459 7703812 YP_002757469.1 CDS Lm4b_00759 NC_012488.1 770032 771936 D peptidoglycan bound protein (LPXTG motif) 770032..771936 Listeria monocytogenes serotype 4b str. CLIP 80459 7703813 YP_002757470.1 CDS Lm4b_00760 NC_012488.1 772213 772722 D transcription regulator 772213..772722 Listeria monocytogenes serotype 4b str. CLIP 80459 7703814 YP_002757471.1 CDS Lm4b_00762 NC_012488.1 773109 773768 R transcription regulator complement(773109..773768) Listeria monocytogenes serotype 4b str. CLIP 80459 7703816 YP_002757472.1 CDS Lm4b_00763 NC_012488.1 774031 774408 D GntR family transcriptional regulator 774031..774408 Listeria monocytogenes serotype 4b str. CLIP 80459 7703817 YP_002757473.1 CDS Lm4b_00764 NC_012488.1 774392 775081 D ABC transporter ATP-binding protein 774392..775081 Listeria monocytogenes serotype 4b str. CLIP 80459 7703819 YP_002757474.1 CDS Lm4b_00765b NC_012488.1 775078 775782 D hypothetical protein 775078..775782 Listeria monocytogenes serotype 4b str. CLIP 80459 7703821 YP_002757475.1 CDS Lm4b_00766 NC_012488.1 775797 777797 D ABC transporter ATP-binding protein 775797..777797 Listeria monocytogenes serotype 4b str. CLIP 80459 7703822 YP_002757476.1 CDS Lm4b_00767 NC_012488.1 777826 778329 D hypothetical protein 777826..778329 Listeria monocytogenes serotype 4b str. CLIP 80459 7703823 YP_002757477.1 CDS Lm4b_00768 NC_012488.1 778480 779316 D a haloacetate dehalogenase 778480..779316 Listeria monocytogenes serotype 4b str. CLIP 80459 7703824 YP_002757478.1 CDS Lm4b_00769 NC_012488.1 779442 780122 D transcription regulator Crp/Fnr family 779442..780122 Listeria monocytogenes serotype 4b str. CLIP 80459 7703825 YP_002757479.1 CDS Lm4b_00770 NC_012488.1 780203 780814 D a bile acid 7-alpha dehydratase 780203..780814 Listeria monocytogenes serotype 4b str. CLIP 80459 7703826 YP_002757480.1 CDS Lm4b_00771 NC_012488.1 780929 781750 D hypothetical protein 780929..781750 Listeria monocytogenes serotype 4b str. CLIP 80459 7703827 YP_002757481.1 CDS Lm4b_00772 NC_012488.1 781722 782627 D ABC transporter ATP-binding protein 781722..782627 Listeria monocytogenes serotype 4b str. CLIP 80459 7703828 YP_002757482.1 CDS Lm4b_00773 NC_012488.1 782620 783600 D hypothetical protein 782620..783600 Listeria monocytogenes serotype 4b str. CLIP 80459 7703829 YP_002757483.1 CDS Lm4b_00774 NC_012488.1 783727 784617 D hypothetical protein 783727..784617 Listeria monocytogenes serotype 4b str. CLIP 80459 7703830 YP_002757484.1 CDS Lm4b_00775 NC_012488.1 784614 785573 D hypothetical protein 784614..785573 Listeria monocytogenes serotype 4b str. CLIP 80459 7703831 YP_002757485.1 CDS Lm4b_00776 NC_012488.1 785580 786188 D hypothetical protein 785580..786188 Listeria monocytogenes serotype 4b str. CLIP 80459 7703832 YP_002757486.1 CDS Lm4b_00777 NC_012488.1 786198 786818 D hypothetical protein 786198..786818 Listeria monocytogenes serotype 4b str. CLIP 80459 7703833 YP_002757487.1 CDS Lm4b_00778 NC_012488.1 787146 788402 D ATP/GTP-binding protein 787146..788402 Listeria monocytogenes serotype 4b str. CLIP 80459 7703834 YP_002757488.1 CDS Lm4b_00779 NC_012488.1 788468 789340 D hypothetical protein 788468..789340 Listeria monocytogenes serotype 4b str. CLIP 80459 7703835 YP_002757489.1 CDS Lm4b_00780 NC_012488.1 789346 790335 D lipoate-protein ligase 789346..790335 Listeria monocytogenes serotype 4b str. CLIP 80459 7703836 YP_002757490.1 CDS Lm4b_00781 NC_012488.1 790490 791788 D hypothetical protein 790490..791788 Listeria monocytogenes serotype 4b str. CLIP 80459 7703837 YP_002757491.1 CDS Lm4b_00782 NC_012488.1 791805 792695 D sugar ABC transporter permease 791805..792695 Listeria monocytogenes serotype 4b str. CLIP 80459 7703838 YP_002757492.1 CDS Lm4b_00783 NC_012488.1 792707 793582 D ABC transporter permease 792707..793582 Listeria monocytogenes serotype 4b str. CLIP 80459 7703839 YP_002757493.1 CDS Lm4b_00784 NC_012488.1 793604 794857 D sugar ABC transporter (binding protein) 793604..794857 Listeria monocytogenes serotype 4b str. CLIP 80459 7703840 YP_002757494.1 CDS Lm4b_00785 NC_012488.1 794861 795889 D alpha-1,6-mannanase 794861..795889 Listeria monocytogenes serotype 4b str. CLIP 80459 7703841 YP_002757495.1 CDS Lm4b_00786 NC_012488.1 795901 797019 R transcriptional regulator (LacI family) complement(795901..797019) Listeria monocytogenes serotype 4b str. CLIP 80459 7703842 YP_002757496.1 CDS Lm4b_00787 NC_012488.1 797179 797931 D hypothetical protein 797179..797931 Listeria monocytogenes serotype 4b str. CLIP 80459 7703843 YP_002757497.1 CDS Lm4b_00788 NC_012488.1 797967 798614 D transcription regulator 797967..798614 Listeria monocytogenes serotype 4b str. CLIP 80459 7703844 YP_002757498.1 CDS Lm4b_00789 NC_012488.1 798655 799644 R alcohol dehydrogenase complement(798655..799644) Listeria monocytogenes serotype 4b str. CLIP 80459 7703845 YP_002757499.1 CDS Lm4b_00790 NC_012488.1 799823 800752 D hypothetical protein 799823..800752 Listeria monocytogenes serotype 4b str. CLIP 80459 7703846 YP_002757500.1 CDS Lm4b_00791 NC_012488.1 800792 801124 D hypothetical protein 800792..801124 Listeria monocytogenes serotype 4b str. CLIP 80459 7703847 YP_002757501.1 CDS Lm4b_00792 NC_012488.1 801162 802028 R transcription regulator (repressor) complement(801162..802028) Listeria monocytogenes serotype 4b str. CLIP 80459 7703929 YP_002757502.1 CDS Lm4b_00793 NC_012488.1 802186 802569 D hypothetical protein 802186..802569 Listeria monocytogenes serotype 4b str. CLIP 80459 7703848 YP_002757503.1 CDS Lm4b_00794 NC_012488.1 803023 803373 D hypothetical protein 803023..803373 Listeria monocytogenes serotype 4b str. CLIP 80459 7703849 YP_002757504.1 CDS Lm4b_00795 NC_012488.1 803576 804043 R hypothetical protein complement(803576..804043) Listeria monocytogenes serotype 4b str. CLIP 80459 7703850 YP_002757505.1 CDS Lm4b_00796 NC_012488.1 804225 805103 R hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; PTS system mannose-specific transporter subunit IID complement(804225..805103) Listeria monocytogenes serotype 4b str. CLIP 80459 7703851 YP_002757506.1 CDS Lm4b_00797 NC_012488.1 805121 805936 R mannose-specific phosphotransferase system (PTS) component IIC complement(805121..805936) Listeria monocytogenes serotype 4b str. CLIP 80459 7703852 YP_002757507.1 CDS Lm4b_00798 NC_012488.1 806111 806596 R mannose-specific phosphotransferase system (PTS) component IIB complement(806111..806596) Listeria monocytogenes serotype 4b str. CLIP 80459 7703853 YP_002757508.1 CDS Lm4b_00799 NC_012488.1 806596 807030 R mannose-specific phosphotransferase system (PTS) component IIA complement(806596..807030) Listeria monocytogenes serotype 4b str. CLIP 80459 7703854 YP_002757509.1 CDS Lm4b_00800 NC_012488.1 807318 810134 R transcriptional regulator (NifA/NtrC family) complement(807318..810134) Listeria monocytogenes serotype 4b str. CLIP 80459 7703855 YP_002757510.1 CDS Lm4b_00801 NC_012488.1 810327 810962 D acyl-carrier protein 810327..810962 Listeria monocytogenes serotype 4b str. CLIP 80459 7703856 YP_002757511.1 CDS Lm4b_00802 NC_012488.1 811156 812532 D amino acid transporter 811156..812532 Listeria monocytogenes serotype 4b str. CLIP 80459 7703857 YP_002757512.1 CDS Lm4b_00803 NC_012488.1 812797 817227 D hypothetical protein 812797..817227 Listeria monocytogenes serotype 4b str. CLIP 80459 7703858 YP_002757513.1 CDS Lm4b_00804 NC_012488.1 817405 819585 D cell surface protein (LPXTG motif) 817405..819585 Listeria monocytogenes serotype 4b str. CLIP 80459 7703859 YP_002757514.1 CDS Lm4b_00805 NC_012488.1 819702 820550 R hypothetical protein complement(819702..820550) Listeria monocytogenes serotype 4b str. CLIP 80459 7703860 YP_002757515.1 CDS Lm4b_00806 NC_012488.1 820577 821053 R transcription regulator complement(820577..821053) Listeria monocytogenes serotype 4b str. CLIP 80459 7703861 YP_002757516.1 CDS Lm4b_00807 NC_012488.1 821177 821827 D hypothetical protein 821177..821827 Listeria monocytogenes serotype 4b str. CLIP 80459 7703862 YP_002757517.1 CDS Lm4b_00808 NC_012488.1 821933 822823 D hypothetical protein 821933..822823 Listeria monocytogenes serotype 4b str. CLIP 80459 7703863 YP_002757518.1 CDS Lm4b_00809 NC_012488.1 822858 823559 R hypothetical protein complement(822858..823559) Listeria monocytogenes serotype 4b str. CLIP 80459 7703864 YP_002757519.1 CDS Lm4b_00810 NC_012488.1 823674 824315 R YwnB protein complement(823674..824315) Listeria monocytogenes serotype 4b str. CLIP 80459 7703865 YP_002757520.1 CDS Lm4b_00811 NC_012488.1 824399 825319 R hypothetical protein complement(824399..825319) Listeria monocytogenes serotype 4b str. CLIP 80459 7703866 YP_002757521.1 CDS Lm4b_00812 NC_012488.1 825428 825958 R hypothetical protein complement(825428..825958) Listeria monocytogenes serotype 4b str. CLIP 80459 7703867 YP_002757522.1 CDS Lm4b_00813 NC_012488.1 826214 826675 D hypothetical protein 826214..826675 Listeria monocytogenes serotype 4b str. CLIP 80459 7703868 YP_002757523.1 CDS Lm4b_00814 NC_012488.1 826727 828187 R lysine-specific permease complement(826727..828187) Listeria monocytogenes serotype 4b str. CLIP 80459 7703869 YP_002757524.1 CDS Lm4b_00815 NC_012488.1 828543 829304 R hypothetical protein complement(828543..829304) Listeria monocytogenes serotype 4b str. CLIP 80459 7703870 YP_002757525.1 CDS Lm4b_00816 NC_012488.1 829457 829810 D YqkB protein 829457..829810 Listeria monocytogenes serotype 4b str. CLIP 80459 7703871 YP_002757526.1 CDS Lm4b_00817 NC_012488.1 829965 830603 D GTP-pyrophosphokinase 829965..830603 Listeria monocytogenes serotype 4b str. CLIP 80459 7703872 YP_002757527.1 CDS Lm4b_00818 NC_012488.1 830732 832780 D Na+/H+ antiporter 830732..832780 Listeria monocytogenes serotype 4b str. CLIP 80459 7703873 YP_002757528.1 CDS Lm4b_00819 NC_012488.1 832820 833293 R hypothetical protein complement(832820..833293) Listeria monocytogenes serotype 4b str. CLIP 80459 7703874 YP_002757529.1 CDS Lm4b_00820 NC_012488.1 833321 833779 R hypothetical protein complement(833321..833779) Listeria monocytogenes serotype 4b str. CLIP 80459 7703875 YP_002757530.1 CDS Lm4b_00821 NC_012488.1 833989 834531 D transcription regulator 833989..834531 Listeria monocytogenes serotype 4b str. CLIP 80459 7703876 YP_002757531.1 CDS Lm4b_00822 NC_012488.1 834547 835641 D spermidine/putrescine ABC transporter ATP-binding protein 834547..835641 Listeria monocytogenes serotype 4b str. CLIP 80459 7703877 YP_002757532.1 CDS Lm4b_00823 NC_012488.1 835641 836450 D spermidine/putrescine ABC transporter permease 835641..836450 Listeria monocytogenes serotype 4b str. CLIP 80459 7703879 YP_002757533.1 CDS Lm4b_00824 NC_012488.1 836447 837253 D spermidine/putrescine ABC transporter permease 836447..837253 Listeria monocytogenes serotype 4b str. CLIP 80459 7703880 YP_002757534.1 CDS Lm4b_00825 NC_012488.1 837250 838323 D spermidine/putrescine-binding protein 837250..838323 Listeria monocytogenes serotype 4b str. CLIP 80459 7703881 YP_002757535.1 CDS Lm4b_00826 NC_012488.1 838453 839154 D carbonic anhydrase 838453..839154 Listeria monocytogenes serotype 4b str. CLIP 80459 7703882 YP_002757536.1 CDS Lm4b_00827 NC_012488.1 839222 839764 D hypothetical protein 839222..839764 Listeria monocytogenes serotype 4b str. CLIP 80459 7703883 YP_002757537.1 CDS Lm4b_00828 NC_012488.1 839900 840772 D fructokinase 839900..840772 Listeria monocytogenes serotype 4b str. CLIP 80459 7703884 YP_002757538.1 CDS Lm4b_00829 NC_012488.1 840857 841783 D oxidoreductase 840857..841783 Listeria monocytogenes serotype 4b str. CLIP 80459 7703885 YP_002757539.1 CDS Lm4b_00830 NC_012488.1 841999 842283 D hypothetical protein 841999..842283 Listeria monocytogenes serotype 4b str. CLIP 80459 7703886 YP_002757540.1 CDS Lm4b_00831 NC_012488.1 842284 842652 D hypothetical protein 842284..842652 Listeria monocytogenes serotype 4b str. CLIP 80459 7703888 YP_002757541.1 CDS Lm4b_00832b NC_012488.1 842649 844124 D hypothetical protein 842649..844124 Listeria monocytogenes serotype 4b str. CLIP 80459 7703890 YP_002757542.1 CDS Lm4b_00833b NC_012488.1 844129 844560 D hypothetical protein 844129..844560 Listeria monocytogenes serotype 4b str. CLIP 80459 7703892 YP_002757543.1 CDS Lm4b_00834 NC_012488.1 844638 844910 D hypothetical protein 844638..844910 Listeria monocytogenes serotype 4b str. CLIP 80459 7703893 YP_002757544.1 CDS Lm4b_00835 NC_012488.1 845045 845449 R PhnB protein complement(845045..845449) Listeria monocytogenes serotype 4b str. CLIP 80459 7703894 YP_002757545.1 CDS Lm4b_00836 NC_012488.1 845674 848304 D cation transporting ATPase 845674..848304 Listeria monocytogenes serotype 4b str. CLIP 80459 7703895 YP_002757546.1 CDS Lm4b_00837 NC_012488.1 848319 849167 D hypothetical protein 848319..849167 Listeria monocytogenes serotype 4b str. CLIP 80459 7703896 YP_002757547.1 CDS Lm4b_00838 NC_012488.1 849277 849834 D acetyltransferase 849277..849834 Listeria monocytogenes serotype 4b str. CLIP 80459 7703897 YP_002757548.1 CDS Lm4b_00839 NC_012488.1 849851 850513 D hypothetical protein 849851..850513 Listeria monocytogenes serotype 4b str. CLIP 80459 7703898 YP_002757549.1 CDS Lm4b_00840 NC_012488.1 850529 850918 R transcriptional regulator complement(850529..850918) Listeria monocytogenes serotype 4b str. CLIP 80459 7703899 YP_002757550.1 CDS Lm4b_00841 NC_012488.1 851038 851862 D oxydoreductase 851038..851862 Listeria monocytogenes serotype 4b str. CLIP 80459 7703900 YP_002757551.1 CDS Lm4b_00842 NC_012488.1 851941 852909 D hypothetical protein 851941..852909 Listeria monocytogenes serotype 4b str. CLIP 80459 7703901 YP_002757552.1 CDS Lm4b_00843 NC_012488.1 852950 854230 D 3-hydroxy-3-methylglutaryl-coenzyme a reductase 852950..854230 Listeria monocytogenes serotype 4b str. CLIP 80459 7703902 YP_002757553.1 CDS Lm4b_00844 NC_012488.1 854429 856063 D transport protein 854429..856063 Listeria monocytogenes serotype 4b str. CLIP 80459 7703903 YP_002757554.1 CDS nifJ NC_012488.1 856216 859863 D pyruvate-flavodoxin oxidoreductase 856216..859863 Listeria monocytogenes serotype 4b str. CLIP 80459 7703904 YP_002757555.1 CDS fbp NC_012488.1 860113 862074 R fructose-1,6-bisphosphatase complement(860113..862074) Listeria monocytogenes serotype 4b str. CLIP 80459 7704022 YP_002757556.1 CDS Lm4b_00847 NC_012488.1 862189 863100 R hypothetical protein complement(862189..863100) Listeria monocytogenes serotype 4b str. CLIP 80459 7702900 YP_002757557.1 CDS Lm4b_00848 NC_012488.1 863756 864040 D transposase 863756..864040 Listeria monocytogenes serotype 4b str. CLIP 80459 7703905 YP_002757558.1 CDS Lm4b_00849 NC_012488.1 864232 865122 D transcriptional regulator 864232..865122 Listeria monocytogenes serotype 4b str. CLIP 80459 7703906 YP_002757559.1 CDS Lm4b_00850 NC_012488.1 865200 865970 D hypothetical protein 865200..865970 Listeria monocytogenes serotype 4b str. CLIP 80459 7703907 YP_002757560.1 CDS Lm4b_00851 NC_012488.1 865963 866967 D peptidoglycan bound protein (LPXTG motif) 865963..866967 Listeria monocytogenes serotype 4b str. CLIP 80459 7703908 YP_002757561.1 CDS Lm4b_00852 NC_012488.1 867010 867423 R phosphate-starvation-inducible protein PsiE complement(867010..867423) Listeria monocytogenes serotype 4b str. CLIP 80459 7703909 YP_002757562.1 CDS Lm4b_00853 NC_012488.1 867512 869233 D hypothetical protein 867512..869233 Listeria monocytogenes serotype 4b str. CLIP 80459 7703910 YP_002757563.1 CDS uhpT NC_012488.1 869527 870912 D cytoplasmic membrane protein that functions as a monomer; catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate; sugar phosphate antiporter 869527..870912 Listeria monocytogenes serotype 4b str. CLIP 80459 7703911 YP_002757564.1 CDS Lm4b_00855 NC_012488.1 871020 872231 R tetracycline resistance protein complement(871020..872231) Listeria monocytogenes serotype 4b str. CLIP 80459 7701625 YP_002757565.1 CDS Lm4b_00856 NC_012488.1 872361 872831 R hypothetical protein complement(872361..872831) Listeria monocytogenes serotype 4b str. CLIP 80459 7703912 YP_002757566.1 CDS Lm4b_00857 NC_012488.1 873033 875675 D cation (calcium) transporting ATPase 873033..875675 Listeria monocytogenes serotype 4b str. CLIP 80459 7703913 YP_002757567.1 CDS Lm4b_00858 NC_012488.1 876127 882219 D hypothetical protein 876127..882219 Listeria monocytogenes serotype 4b str. CLIP 80459 7703914 YP_002757568.1 CDS Lm4b_00859 NC_012488.1 882357 882614 R protein YsdA complement(882357..882614) Listeria monocytogenes serotype 4b str. CLIP 80459 7703915 YP_002757569.1 CDS Lm4b_00860 NC_012488.1 882694 883071 D hypothetical protein 882694..883071 Listeria monocytogenes serotype 4b str. CLIP 80459 7703916 YP_002757570.1 CDS Lm4b_00861 NC_012488.1 883333 884436 D hypothetical protein 883333..884436 Listeria monocytogenes serotype 4b str. CLIP 80459 7703917 YP_002757571.1 CDS Lm4b_00862 NC_012488.1 884541 885641 D excinuclease ABC subunit C 884541..885641 Listeria monocytogenes serotype 4b str. CLIP 80459 7703918 YP_002757572.1 CDS Lm4b_00863 NC_012488.1 885811 887253 D Glutamine ABC transporter (binding and transport protein) 885811..887253 Listeria monocytogenes serotype 4b str. CLIP 80459 7703919 YP_002757573.1 CDS Lm4b_00864 NC_012488.1 887246 887974 D amino acid ABC transporter ATP-binding protein 887246..887974 Listeria monocytogenes serotype 4b str. CLIP 80459 7703920 YP_002757574.1 CDS Lm4b_00865 NC_012488.1 888023 889870 R catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase complement(888023..889870) Listeria monocytogenes serotype 4b str. CLIP 80459 7703921 YP_002757575.1 CDS Lm4b_00866 NC_012488.1 890437 890583 D hypothetical protein 890437..890583 Listeria monocytogenes serotype 4b str. CLIP 80459 7703922 YP_002757576.1 CDS Lm4b_00867 NC_012488.1 890804 891562 D hypothetical protein 890804..891562 Listeria monocytogenes serotype 4b str. CLIP 80459 7703923 YP_002757577.1 CDS Lm4b_00868 NC_012488.1 891642 892196 D TetR family transcriptional regulator 891642..892196 Listeria monocytogenes serotype 4b str. CLIP 80459 7703924 YP_002757578.1 CDS Lm4b_00869 NC_012488.1 892213 892554 D SugE protein (transmembrane chaperone) 892213..892554 Listeria monocytogenes serotype 4b str. CLIP 80459 7703925 YP_002757579.1 CDS Lm4b_00870 NC_012488.1 892557 892877 D SugE protein (transmembrane chaperone) 892557..892877 Listeria monocytogenes serotype 4b str. CLIP 80459 7703926 YP_002757580.1 CDS ddl NC_012488.1 893027 894139 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 893027..894139 Listeria monocytogenes serotype 4b str. CLIP 80459 7703927 YP_002757581.1 CDS murF NC_012488.1 894203 895576 D UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase 894203..895576 Listeria monocytogenes serotype 4b str. CLIP 80459 7703275 YP_002757582.1 CDS Lm4b_00873 NC_012488.1 895643 896356 D carboxylesterase 895643..896356 Listeria monocytogenes serotype 4b str. CLIP 80459 7704012 YP_002757583.1 CDS Lm4b_00874 NC_012488.1 896368 897393 R transcription regulator lacI family complement(896368..897393) Listeria monocytogenes serotype 4b str. CLIP 80459 7703928 YP_002757584.1 CDS Lm4b_00875 NC_012488.1 897637 898956 D sugar ABC transporter (binding protein) 897637..898956 Listeria monocytogenes serotype 4b str. CLIP 80459 7704206 YP_002757585.1 CDS Lm4b_00876 NC_012488.1 898953 899831 D sugar ABC transporter permease 898953..899831 Listeria monocytogenes serotype 4b str. CLIP 80459 7704207 YP_002757586.1 CDS Lm4b_00877 NC_012488.1 899818 900651 D sugar ABC transporter permease 899818..900651 Listeria monocytogenes serotype 4b str. CLIP 80459 7704208 YP_002757587.1 CDS Lm4b_00878 NC_012488.1 900667 902199 D oligo-1,6-glucosidase 900667..902199 Listeria monocytogenes serotype 4b str. CLIP 80459 7704209 YP_002757588.1 CDS Lm4b_00879 NC_012488.1 902201 903115 D hypothetical protein 902201..903115 Listeria monocytogenes serotype 4b str. CLIP 80459 7704210 YP_002757589.1 CDS Lm4b_00880 NC_012488.1 903137 904204 D hypothetical protein 903137..904204 Listeria monocytogenes serotype 4b str. CLIP 80459 7704211 YP_002757590.1 CDS Lm4b_00881 NC_012488.1 904201 905874 D phosphomannomutase 904201..905874 Listeria monocytogenes serotype 4b str. CLIP 80459 7704212 YP_002757591.1 CDS Lm4b_00882 NC_012488.1 906336 907889 D ATP-dependent RNA helicase 906336..907889 Listeria monocytogenes serotype 4b str. CLIP 80459 7704213 YP_002757592.1 CDS Lm4b_00884 NC_012488.1 908009 908185 D hypothetical protein 908009..908185 Listeria monocytogenes serotype 4b str. CLIP 80459 7704385 YP_002757593.1 CDS Lm4b_00885 NC_012488.1 908333 908821 D hypothetical protein 908333..908821 Listeria monocytogenes serotype 4b str. CLIP 80459 7704470 YP_002757594.1 CDS Lm4b_00886 NC_012488.1 908853 909410 R hypothetical protein complement(908853..909410) Listeria monocytogenes serotype 4b str. CLIP 80459 7704471 YP_002757595.1 CDS Lm4b_00887 NC_012488.1 909512 910510 D hypothetical protein 909512..910510 Listeria monocytogenes serotype 4b str. CLIP 80459 7704472 YP_002757596.1 CDS Lm4b_00888 NC_012488.1 910527 910838 D hypothetical protein 910527..910838 Listeria monocytogenes serotype 4b str. CLIP 80459 7704473 YP_002757597.1 CDS Lm4b_00889 NC_012488.1 910871 911224 R YtcD protein complement(910871..911224) Listeria monocytogenes serotype 4b str. CLIP 80459 7704474 YP_002757598.1 CDS Lm4b_00890 NC_012488.1 911352 912518 D antibiotic resistance protein 911352..912518 Listeria monocytogenes serotype 4b str. CLIP 80459 7704475 YP_002757599.1 CDS Lm4b_00891 NC_012488.1 912726 914744 D transcriptional regulator (antiterminator) 912726..914744 Listeria monocytogenes serotype 4b str. CLIP 80459 7704476 YP_002757600.1 CDS Lm4b_00892 NC_012488.1 914759 915088 D PTS system enzyme IIA component 914759..915088 Listeria monocytogenes serotype 4b str. CLIP 80459 7704477 YP_002757601.1 CDS Lm4b_00893 NC_012488.1 915089 915424 D PTS system, beta-glucoside enzyme IIB component 915089..915424 Listeria monocytogenes serotype 4b str. CLIP 80459 7704478 YP_002757602.1 CDS Lm4b_00894 NC_012488.1 915444 916769 D PTS system, Lichenan-specific enzyme IIC component 915444..916769 Listeria monocytogenes serotype 4b str. CLIP 80459 7704479 YP_002757603.1 CDS Lm4b_00895 NC_012488.1 916790 917518 D NagB protein (glucosamine-6-phosphate isomerase) 916790..917518 Listeria monocytogenes serotype 4b str. CLIP 80459 7704480 YP_002757604.1 CDS Lm4b_00896 NC_012488.1 917518 918471 D oxidoreductase 917518..918471 Listeria monocytogenes serotype 4b str. CLIP 80459 7704481 YP_002757605.1 CDS Lm4b_00897 NC_012488.1 918489 919256 D hypothetical protein 918489..919256 Listeria monocytogenes serotype 4b str. CLIP 80459 7704482 YP_002757606.1 CDS Lm4b_00898 NC_012488.1 919374 920762 D peptidoglycan linked protein (LPXTG) 919374..920762 Listeria monocytogenes serotype 4b str. CLIP 80459 7704483 YP_002757607.1 CDS Lm4b_00899 NC_012488.1 920808 921284 R hypothetical protein complement(920808..921284) Listeria monocytogenes serotype 4b str. CLIP 80459 7704484 YP_002757608.1 CDS Lm4b_00900 NC_012488.1 921417 921899 D YdbS protein 921417..921899 Listeria monocytogenes serotype 4b str. CLIP 80459 7704485 YP_002757609.1 CDS Lm4b_00901 NC_012488.1 921892 923367 D YbtB protein 921892..923367 Listeria monocytogenes serotype 4b str. CLIP 80459 7704486 YP_002757610.1 CDS Lm4b_00902 NC_012488.1 923517 924896 D catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX; protoporphyrinogen oxidase 923517..924896 Listeria monocytogenes serotype 4b str. CLIP 80459 7704487 YP_002757611.1 CDS acpS NC_012488.1 924898 925254 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 924898..925254 Listeria monocytogenes serotype 4b str. CLIP 80459 7704488 YP_002757612.1 CDS dal NC_012488.1 925273 926379 D alanine racemase 925273..926379 Listeria monocytogenes serotype 4b str. CLIP 80459 7704489 YP_002757613.1 CDS Lm4b_00905 NC_012488.1 926585 926863 D YdcD protein 926585..926863 Listeria monocytogenes serotype 4b str. CLIP 80459 7703273 YP_002757614.1 CDS Lm4b_00906 NC_012488.1 926867 927214 D YdcE protein 926867..927214 Listeria monocytogenes serotype 4b str. CLIP 80459 7704491 YP_002757615.1 CDS rsbR NC_012488.1 927465 928301 D positive regulator of sigma-B activity 927465..928301 Listeria monocytogenes serotype 4b str. CLIP 80459 7704492 YP_002757616.1 CDS rsbS NC_012488.1 928307 928663 D negative regulation of sigma-B activity 928307..928663 Listeria monocytogenes serotype 4b str. CLIP 80459 7702474 YP_002757617.1 CDS rsbT NC_012488.1 928666 929076 D positive regulation of sigma-B activity 928666..929076 Listeria monocytogenes serotype 4b str. CLIP 80459 7702476 YP_002757618.1 CDS rsbU NC_012488.1 929093 930097 D serine phosphatase RsbU 929093..930097 Listeria monocytogenes serotype 4b str. CLIP 80459 7702477 YP_002757619.1 CDS rsbV NC_012488.1 930247 930591 D anti-anti-sigma factor (antagonist of RsbW) 930247..930591 Listeria monocytogenes serotype 4b str. CLIP 80459 7702478 YP_002757620.1 CDS rsbW NC_012488.1 930575 931048 D binds to sigma-B preventing the formation of an RNA polymerase holoenzyme; serine-protein kinase RsbW 930575..931048 Listeria monocytogenes serotype 4b str. CLIP 80459 7702479 YP_002757621.1 CDS sigB NC_012488.1 931026 931805 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; RNA polymerase sigma factor SigB 931026..931805 Listeria monocytogenes serotype 4b str. CLIP 80459 7702480 YP_002757622.1 CDS rsbX NC_012488.1 931806 932405 D Phosphoserine phosphatase rsbX (Sigma-B negative effector) 931806..932405 Listeria monocytogenes serotype 4b str. CLIP 80459 7701585 YP_002757623.1 CDS Lm4b_00915 NC_012488.1 932610 934241 D transport protein 932610..934241 Listeria monocytogenes serotype 4b str. CLIP 80459 7702481 YP_002757624.1 CDS Lm4b_00916 NC_012488.1 934312 936489 D hypothetical protein 934312..936489 Listeria monocytogenes serotype 4b str. CLIP 80459 7704493 YP_002757625.1 CDS Lm4b_00917 NC_012488.1 936489 936956 D hypothetical protein 936489..936956 Listeria monocytogenes serotype 4b str. CLIP 80459 7704494 YP_002757626.1 CDS Lm4b_00918 NC_012488.1 937325 937753 D hypothetical protein 937325..937753 Listeria monocytogenes serotype 4b str. CLIP 80459 7703442 YP_002757627.1 CDS Lm4b_00919 NC_012488.1 937780 938265 D hypothetical protein 937780..938265 Listeria monocytogenes serotype 4b str. CLIP 80459 7704497 YP_002757628.1 CDS Lm4b_00920 NC_012488.1 938320 938712 D hypothetical protein 938320..938712 Listeria monocytogenes serotype 4b str. CLIP 80459 7704498 YP_002757629.1 CDS Lm4b_00921 NC_012488.1 938858 940144 D PTS system, cellobiose-specific IIC component 938858..940144 Listeria monocytogenes serotype 4b str. CLIP 80459 7704499 YP_002757630.1 CDS Lm4b_00922 NC_012488.1 940225 940938 D GntR family transcriptional regulator 940225..940938 Listeria monocytogenes serotype 4b str. CLIP 80459 7704500 YP_002757631.1 CDS Lm4b_00924 NC_012488.1 941929 942603 D hypothetical protein 941929..942603 Listeria monocytogenes serotype 4b str. CLIP 80459 7704503 YP_002757632.1 CDS Lm4b_00925 NC_012488.1 942734 943231 D hypothetical protein 942734..943231 Listeria monocytogenes serotype 4b str. CLIP 80459 7704504 YP_002757633.1 CDS Lm4b_00926 NC_012488.1 943267 944616 D catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 943267..944616 Listeria monocytogenes serotype 4b str. CLIP 80459 7704505 YP_002757634.1 CDS Lm4b_00927 NC_012488.1 944645 945319 D phosphoglycerate mutase 944645..945319 Listeria monocytogenes serotype 4b str. CLIP 80459 7704506 YP_002757635.1 CDS Lm4b_00928 NC_012488.1 945362 946498 R membrane protein complement(945362..946498) Listeria monocytogenes serotype 4b str. CLIP 80459 7704507 YP_002757636.1 CDS Lm4b_00929 NC_012488.1 946639 947031 D GntR family transcriptional regulator 946639..947031 Listeria monocytogenes serotype 4b str. CLIP 80459 7704508 YP_002757637.1 CDS Lm4b_00930 NC_012488.1 947034 948137 D hypothetical protein 947034..948137 Listeria monocytogenes serotype 4b str. CLIP 80459 7704509 YP_002757638.1 CDS Lm4b_00931 NC_012488.1 948220 948723 D hypothetical protein 948220..948723 Listeria monocytogenes serotype 4b str. CLIP 80459 7704510 YP_002757639.1 CDS Lm4b_00932 NC_012488.1 948837 949649 D transporter (formate) 948837..949649 Listeria monocytogenes serotype 4b str. CLIP 80459 7704511 YP_002757640.1 CDS Lm4b_00933 NC_012488.1 949874 951340 D succinate semialdehyde dehydrogenase 949874..951340 Listeria monocytogenes serotype 4b str. CLIP 80459 7704512 YP_002757641.1 CDS Lm4b_00934 NC_012488.1 951484 951789 D PTS system, IIB component 951484..951789 Listeria monocytogenes serotype 4b str. CLIP 80459 7704513 YP_002757642.1 CDS Lm4b_00935 NC_012488.1 951794 953062 D phosphotransferase system enzyme IIC 951794..953062 Listeria monocytogenes serotype 4b str. CLIP 80459 7704514 YP_002757643.1 CDS Lm4b_00936 NC_012488.1 953077 953427 D phosphotransferase system enzyme IIA 953077..953427 Listeria monocytogenes serotype 4b str. CLIP 80459 7704515 YP_002757644.1 CDS Lm4b_00937 NC_012488.1 953439 954890 D beta-glucosidase 953439..954890 Listeria monocytogenes serotype 4b str. CLIP 80459 7704516 YP_002757645.1 CDS Lm4b_00938 NC_012488.1 954963 956861 D transcription antiterminator BglG family 954963..956861 Listeria monocytogenes serotype 4b str. CLIP 80459 7704517 YP_002757646.1 CDS Lm4b_00939 NC_012488.1 957153 958724 D antibiotic ABC transporter ATP-binding protein 957153..958724 Listeria monocytogenes serotype 4b str. CLIP 80459 7704518 YP_002757647.1 CDS Lm4b_00940 NC_012488.1 958846 959886 D YcgR protein 958846..959886 Listeria monocytogenes serotype 4b str. CLIP 80459 7704519 YP_002757648.1 CDS Lm4b_00941 NC_012488.1 959905 960744 D hypothetical protein 959905..960744 Listeria monocytogenes serotype 4b str. CLIP 80459 7704520 YP_002757649.1 CDS Lm4b_00942 NC_012488.1 960833 961753 D catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 960833..961753 Listeria monocytogenes serotype 4b str. CLIP 80459 7704521 YP_002757650.1 CDS Lm4b_00943 NC_012488.1 961869 962591 D ABC transporter ATP-binding protein 961869..962591 Listeria monocytogenes serotype 4b str. CLIP 80459 7704522 YP_002757651.1 CDS Lm4b_00944 NC_012488.1 962591 963706 D membrane protein 962591..963706 Listeria monocytogenes serotype 4b str. CLIP 80459 7704523 YP_002757652.1 CDS Lm4b_00945 NC_012488.1 963729 964385 D TetR family transcriptional regulator 963729..964385 Listeria monocytogenes serotype 4b str. CLIP 80459 7704524 YP_002757653.1 CDS Lm4b_00946 NC_012488.1 964417 966378 R hypothetical protein complement(964417..966378) Listeria monocytogenes serotype 4b str. CLIP 80459 7704525 YP_002757654.1 CDS Lm4b_00947 NC_012488.1 966637 967260 D responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 966637..967260 Listeria monocytogenes serotype 4b str. CLIP 80459 7704526 YP_002757655.1 CDS srtA NC_012488.1 967369 968037 D Sortase 967369..968037 Listeria monocytogenes serotype 4b str. CLIP 80459 7704527 YP_002757656.1 CDS Lm4b_00949 NC_012488.1 968150 968881 D hypothetical protein 968150..968881 Listeria monocytogenes serotype 4b str. CLIP 80459 7701592 YP_002757657.1 CDS Lm4b_00950 NC_012488.1 968905 969900 D lipoate protein ligase A 968905..969900 Listeria monocytogenes serotype 4b str. CLIP 80459 7704528 YP_002757658.1 CDS Lm4b_00951 NC_012488.1 969940 970545 R hypothetical protein complement(969940..970545) Listeria monocytogenes serotype 4b str. CLIP 80459 7704529 YP_002757659.1 CDS Lm4b_00952 NC_012488.1 970672 972729 R hypothetical protein complement(970672..972729) Listeria monocytogenes serotype 4b str. CLIP 80459 7704530 YP_002757660.1 CDS Lm4b_00954 NC_012488.1 973089 974228 D YhbA protein 973089..974228 Listeria monocytogenes serotype 4b str. CLIP 80459 7703445 YP_002757661.1 CDS Lm4b_00955 NC_012488.1 974249 974758 D CspR protein, rRNA methylase homolog 974249..974758 Listeria monocytogenes serotype 4b str. CLIP 80459 7704532 YP_002757662.1 CDS Lm4b_00956 NC_012488.1 974771 975511 D Nitroflavin-reductase 974771..975511 Listeria monocytogenes serotype 4b str. CLIP 80459 7704533 YP_002757663.1 CDS Lm4b_00957 NC_012488.1 975561 975722 R hypothetical protein complement(975561..975722) Listeria monocytogenes serotype 4b str. CLIP 80459 7704534 YP_002757664.1 CDS Lm4b_00958 NC_012488.1 975810 976268 R protein-tyrosine-phosphatase complement(975810..976268) Listeria monocytogenes serotype 4b str. CLIP 80459 7704535 YP_002757665.1 CDS Lm4b_00959 NC_012488.1 976281 977027 R hypothetical protein complement(976281..977027) Listeria monocytogenes serotype 4b str. CLIP 80459 7704536 YP_002757666.1 CDS Lm4b_00960 NC_012488.1 977123 978091 R hypothetical protein complement(977123..978091) Listeria monocytogenes serotype 4b str. CLIP 80459 7704537 YP_002757667.1 CDS Lm4b_00961 NC_012488.1 978103 979908 R HSP90 family protein complement(978103..979908) Listeria monocytogenes serotype 4b str. CLIP 80459 7704538 YP_002757668.1 CDS fri NC_012488.1 980111 980581 D non-heme iron-binding ferritin 980111..980581 Listeria monocytogenes serotype 4b str. CLIP 80459 7704539 YP_002757669.1 CDS Lm4b_00963 NC_012488.1 980814 981116 D hypothetical protein 980814..981116 Listeria monocytogenes serotype 4b str. CLIP 80459 7702911 YP_002757670.1 CDS Lm4b_00965 NC_012488.1 981229 982359 D hypothetical protein 981229..982359 Listeria monocytogenes serotype 4b str. CLIP 80459 7704540 YP_002757671.1 CDS Lm4b_00966 NC_012488.1 982369 982596 D hypothetical protein 982369..982596 Listeria monocytogenes serotype 4b str. CLIP 80459 7704541 YP_002757672.1 CDS Lm4b_00967 NC_012488.1 982795 984012 R putative transport protein complement(982795..984012) Listeria monocytogenes serotype 4b str. CLIP 80459 7704542 YP_002757673.1 CDS Lm4b_00968 NC_012488.1 984009 984698 R transcription regulator complement(984009..984698) Listeria monocytogenes serotype 4b str. CLIP 80459 7704543 YP_002757674.1 CDS Lm4b_00969 NC_012488.1 984820 985866 D hypothetical protein 984820..985866 Listeria monocytogenes serotype 4b str. CLIP 80459 7704544 YP_002757675.1 CDS Lm4b_00970 NC_012488.1 985876 986775 R hypothetical protein complement(985876..986775) Listeria monocytogenes serotype 4b str. CLIP 80459 7704545 YP_002757676.1 CDS Lm4b_00971 NC_012488.1 986796 987617 R hypothetical protein complement(986796..987617) Listeria monocytogenes serotype 4b str. CLIP 80459 7704546 YP_002757677.1 CDS Lm4b_00972 NC_012488.1 987775 988233 D hypothetical protein 987775..988233 Listeria monocytogenes serotype 4b str. CLIP 80459 7704547 YP_002757678.1 CDS Lm4b_00973 NC_012488.1 988327 988560 D hypothetical protein 988327..988560 Listeria monocytogenes serotype 4b str. CLIP 80459 7704548 YP_002757679.1 CDS Lm4b_00974 NC_012488.1 988788 989102 D hypothetical protein 988788..989102 Listeria monocytogenes serotype 4b str. CLIP 80459 7704549 YP_002757680.1 CDS Lm4b_00975 NC_012488.1 989118 989963 D hypothetical protein 989118..989963 Listeria monocytogenes serotype 4b str. CLIP 80459 7704550 YP_002757681.1 CDS Lm4b_00976 NC_012488.1 990152 991285 D N-acetylglucosamine-6-phosphate deacetylase 990152..991285 Listeria monocytogenes serotype 4b str. CLIP 80459 7704175 YP_002757682.1 CDS Lm4b_00977 NC_012488.1 991301 992005 D glucosamine-6-phosphate isomerase 991301..992005 Listeria monocytogenes serotype 4b str. CLIP 80459 7703044 YP_002757683.1 CDS Lm4b_00978 NC_012488.1 992021 992743 D GntR family transcriptional regulator 992021..992743 Listeria monocytogenes serotype 4b str. CLIP 80459 7703045 YP_002757684.1 CDS Lm4b_00979 NC_012488.1 992863 993918 D undacaprenyl-phosphate N-acetylglucosaminyltransferase 992863..993918 Listeria monocytogenes serotype 4b str. CLIP 80459 7703046 YP_002757685.1 CDS Lm4b_00980 NC_012488.1 994031 994939 D protease 994031..994939 Listeria monocytogenes serotype 4b str. CLIP 80459 7703047 YP_002757686.1 CDS Lm4b_00981 NC_012488.1 994954 996180 D protease 994954..996180 Listeria monocytogenes serotype 4b str. CLIP 80459 7703048 YP_002757687.1 CDS lemA NC_012488.1 996264 996821 D epitope LemA 996264..996821 Listeria monocytogenes serotype 4b str. CLIP 80459 7703049 YP_002757688.1 CDS Lm4b_00983 NC_012488.1 996844 997758 D putative metalloprotease; heat shock protein HtpX 996844..997758 Listeria monocytogenes serotype 4b str. CLIP 80459 7702525 YP_002757689.1 CDS Lm4b_00984 NC_012488.1 997797 998615 R YjbH protein complement(997797..998615) Listeria monocytogenes serotype 4b str. CLIP 80459 7703051 YP_002757690.1 CDS Lm4b_00985 NC_012488.1 998853 999437 R YjbK protein complement(998853..999437) Listeria monocytogenes serotype 4b str. CLIP 80459 7703052 YP_002757691.1 CDS Lm4b_00986 NC_012488.1 999454 999921 R hypothetical protein complement(999454..999921) Listeria monocytogenes serotype 4b str. CLIP 80459 7703053 YP_002757692.1 CDS Lm4b_00987 NC_012488.1 1000080 1000748 D YjbM protein 1000080..1000748 Listeria monocytogenes serotype 4b str. CLIP 80459 7703054 YP_002757693.1 CDS ppnK NC_012488.1 1000780 1001574 D catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1000780..1001574 Listeria monocytogenes serotype 4b str. CLIP 80459 7703055 YP_002757694.1 CDS Lm4b_00989 NC_012488.1 1001593 1002483 D ribosomal large subunit pseudouridine synthetase 1001593..1002483 Listeria monocytogenes serotype 4b str. CLIP 80459 7703056 YP_002757695.1 CDS Lm4b_00990 NC_012488.1 1002561 1003349 D Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 1002561..1003349 Listeria monocytogenes serotype 4b str. CLIP 80459 7703057 YP_002757696.1 CDS dltD NC_012488.1 1003377 1004651 R DltD protein complement(1003377..1004651) Listeria monocytogenes serotype 4b str. CLIP 80459 7703058 YP_002757697.1 CDS dltC NC_012488.1 1004651 1004887 R D-alanyl carrier protein subunit; involved in the incorporation of D-alanine into membrane-associated D-alanyl-lipoteichoic acid; D-alanyl carrier protein is the acceptor of activated D-alanine which it donates to a membrane acceptor(D-alanyl transferase) for incorporation into membrane lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 2 complement(1004651..1004887) Listeria monocytogenes serotype 4b str. CLIP 80459 7703283 YP_002757698.1 CDS dltB NC_012488.1 1004913 1006097 R DltB protein complement(1004913..1006097) Listeria monocytogenes serotype 4b str. CLIP 80459 7703282 YP_002757699.1 CDS dltA NC_012488.1 1006094 1007626 R transfers D-alanine to the D-alanyl carrier protein during the incorporation of D-alanine into lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 1 complement(1006094..1007626) Listeria monocytogenes serotype 4b str. CLIP 80459 7703281 YP_002757700.1 CDS Lm4b_00995 NC_012488.1 1008017 1008691 D Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1008017..1008691 Listeria monocytogenes serotype 4b str. CLIP 80459 7703280 YP_002757701.1 CDS Lm4b_00996 NC_012488.1 1008736 1009170 R YjcF protein complement(1008736..1009170) Listeria monocytogenes serotype 4b str. CLIP 80459 7703059 YP_002757702.1 CDS Lm4b_00997 NC_012488.1 1009188 1009937 R YjcH protein complement(1009188..1009937) Listeria monocytogenes serotype 4b str. CLIP 80459 7703060 YP_002757703.1 CDS Lm4b_00998 NC_012488.1 1010156 1011175 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 1010156..1011175 Listeria monocytogenes serotype 4b str. CLIP 80459 7703061 YP_002757704.1 CDS Lm4b_00999 NC_012488.1 1011373 1012137 D daunorubicin resistance ATP-binding protein 1011373..1012137 Listeria monocytogenes serotype 4b str. CLIP 80459 7703062 YP_002757705.1 CDS Lm4b_01000 NC_012488.1 1012134 1012886 D ABC transporter permease 1012134..1012886 Listeria monocytogenes serotype 4b str. CLIP 80459 7703063 YP_002757706.1 CDS Lm4b_01001 NC_012488.1 1012920 1014395 R efflux transporter complement(1012920..1014395) Listeria monocytogenes serotype 4b str. CLIP 80459 7703064 YP_002757707.1 CDS Lm4b_01002 NC_012488.1 1014536 1015588 D glucanase and peptidase 1014536..1015588 Listeria monocytogenes serotype 4b str. CLIP 80459 7703065 YP_002757708.1 CDS Lm4b_01003 NC_012488.1 1015601 1016080 D glutathione peroxidase 1015601..1016080 Listeria monocytogenes serotype 4b str. CLIP 80459 7703066 YP_002757709.1 CDS Lm4b_01004 NC_012488.1 1016213 1016668 D two-component response regulator 1016213..1016668 Listeria monocytogenes serotype 4b str. CLIP 80459 7703067 YP_002757710.1 CDS Lm4b_01005 NC_012488.1 1016665 1017093 D hypothetical protein 1016665..1017093 Listeria monocytogenes serotype 4b str. CLIP 80459 7703068 YP_002757711.1 CDS Lm4b_01006 NC_012488.1 1017090 1018001 D antibiotic ABC transporter, ATP-binding protein 1017090..1018001 Listeria monocytogenes serotype 4b str. CLIP 80459 7703069 YP_002757712.1 CDS Lm4b_01007 NC_012488.1 1017994 1018848 D CylB protein 1017994..1018848 Listeria monocytogenes serotype 4b str. CLIP 80459 7703070 YP_002757713.1 CDS prfC NC_012488.1 1018930 1020498 D stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 1018930..1020498 Listeria monocytogenes serotype 4b str. CLIP 80459 7703071 YP_002757714.1 CDS Lm4b_01009 NC_012488.1 1020606 1021031 D regulatory proteins (MarR family) 1020606..1021031 Listeria monocytogenes serotype 4b str. CLIP 80459 7703072 YP_002757715.1 CDS Lm4b_01010 NC_012488.1 1021084 1022445 D hypothetical protein 1021084..1022445 Listeria monocytogenes serotype 4b str. CLIP 80459 7703073 YP_002757716.1 CDS Lm4b_01011 NC_012488.1 1022727 1023494 D hypothetical protein 1022727..1023494 Listeria monocytogenes serotype 4b str. CLIP 80459 7703074 YP_002757717.1 CDS Lm4b_01012 NC_012488.1 1023597 1024364 D hypothetical protein 1023597..1024364 Listeria monocytogenes serotype 4b str. CLIP 80459 7703075 YP_002757718.1 CDS Lm4b_01013 NC_012488.1 1024405 1025742 D Na+-transporting ATP synthase subunit J 1024405..1025742 Listeria monocytogenes serotype 4b str. CLIP 80459 7703076 YP_002757719.1 CDS Lm4b_01014 NC_012488.1 1025822 1026190 R hypothetical protein complement(1025822..1026190) Listeria monocytogenes serotype 4b str. CLIP 80459 7703077 YP_002757720.1 CDS Lm4b_01015 NC_012488.1 1026220 1027251 R YkrP protein complement(1026220..1027251) Listeria monocytogenes serotype 4b str. CLIP 80459 7703078 YP_002757721.1 CDS Lm4b_01016 NC_012488.1 1027437 1027916 D methylated-DNA-protein-cystein methyltransferase 1027437..1027916 Listeria monocytogenes serotype 4b str. CLIP 80459 7703079 YP_002757722.1 CDS clpE NC_012488.1 1027932 1030100 R ATP-dependent protease complement(1027932..1030100) Listeria monocytogenes serotype 4b str. CLIP 80459 7703080 YP_002757723.1 CDS Lm4b_01018 NC_012488.1 1030264 1030875 R hypothetical protein complement(1030264..1030875) Listeria monocytogenes serotype 4b str. CLIP 80459 7703241 YP_002757724.1 CDS Lm4b_01019 NC_012488.1 1031021 1031812 D hypothetical protein 1031021..1031812 Listeria monocytogenes serotype 4b str. CLIP 80459 7703081 YP_002757725.1 CDS Lm4b_01020 NC_012488.1 1031813 1033285 R phytoene dehydrogenase complement(1031813..1033285) Listeria monocytogenes serotype 4b str. CLIP 80459 7703082 YP_002757726.1 CDS Lm4b_01021 NC_012488.1 1033390 1033674 R protein YkvS complement(1033390..1033674) Listeria monocytogenes serotype 4b str. CLIP 80459 7703083 YP_002757727.1 CDS ptsH NC_012488.1 1033981 1034247 D phosphocarrier protein HPr 1033981..1034247 Listeria monocytogenes serotype 4b str. CLIP 80459 7703084 YP_002757728.1 CDS Lm4b_01023 NC_012488.1 1034247 1035965 D phosphotransferase system enzyme I 1034247..1035965 Listeria monocytogenes serotype 4b str. CLIP 80459 7704077 YP_002757729.1 CDS Lm4b_01024 NC_012488.1 1036078 1037112 D hypothetical protein 1036078..1037112 Listeria monocytogenes serotype 4b str. CLIP 80459 7703085 YP_002757730.1 CDS Lm4b_01025 NC_012488.1 1037125 1037985 D 3-hydroxyisobutyrate dehydrogenase 1037125..1037985 Listeria monocytogenes serotype 4b str. CLIP 80459 7703086 YP_002757731.1 CDS Lm4b_01026 NC_012488.1 1038022 1039167 R aminotransferase complement(1038022..1039167) Listeria monocytogenes serotype 4b str. CLIP 80459 7703087 YP_002757732.1 CDS Lm4b_01027 NC_012488.1 1039387 1039608 D hypothetical protein 1039387..1039608 Listeria monocytogenes serotype 4b str. CLIP 80459 7703088 YP_002757733.1 CDS Lm4b_01028 NC_012488.1 1039913 1040146 D YkuJ protein 1039913..1040146 Listeria monocytogenes serotype 4b str. CLIP 80459 7703089 YP_002757734.1 CDS Lm4b_01029 NC_012488.1 1040348 1040800 D YkuL protein 1040348..1040800 Listeria monocytogenes serotype 4b str. CLIP 80459 7703090 YP_002757735.1 CDS Lm4b_01030 NC_012488.1 1040797 1041675 D LysR family transcriptional regulator 1040797..1041675 Listeria monocytogenes serotype 4b str. CLIP 80459 7703091 YP_002757736.1 CDS Lm4b_01031 NC_012488.1 1041723 1042433 D tetrahydrodipicolinate succinylase 1041723..1042433 Listeria monocytogenes serotype 4b str. CLIP 80459 7703092 YP_002757737.1 CDS Lm4b_01032 NC_012488.1 1042497 1043612 D N-acyl-L-amino acid amidohydrolase 1042497..1043612 Listeria monocytogenes serotype 4b str. CLIP 80459 7703093 YP_002757738.1 CDS Lm4b_01033 NC_012488.1 1043656 1044501 R hypothetical protein complement(1043656..1044501) Listeria monocytogenes serotype 4b str. CLIP 80459 7703094 YP_002757739.1 CDS gbuA NC_012488.1 1044873 1046066 D glycine betaine ABC transporter (ATP-binding protein) 1044873..1046066 Listeria monocytogenes serotype 4b str. CLIP 80459 7703095 YP_002757740.1 CDS gbuB NC_012488.1 1046059 1046907 D glycine betaine ABC transporter (permease) 1046059..1046907 Listeria monocytogenes serotype 4b str. CLIP 80459 7702929 YP_002757741.1 CDS gbuC NC_012488.1 1046921 1047823 D glycine/betaine ABC transporter substrate-binding protein 1046921..1047823 Listeria monocytogenes serotype 4b str. CLIP 80459 7702930 YP_002757742.1 CDS Lm4b_01037 NC_012488.1 1047938 1048429 D phosphotransferase system glucose-specific enzyme IIA 1047938..1048429 Listeria monocytogenes serotype 4b str. CLIP 80459 7702931 YP_002757743.1 CDS Lm4b_01038 NC_012488.1 1048541 1049236 D copper homeostasis protein CutC 1048541..1049236 Listeria monocytogenes serotype 4b str. CLIP 80459 7703096 YP_002757744.1 CDS Lm4b_01039 NC_012488.1 1049317 1050189 D YitL protein 1049317..1050189 Listeria monocytogenes serotype 4b str. CLIP 80459 7703097 YP_002757745.1 CDS Lm4b_01040 NC_012488.1 1050324 1051037 D YvqF protein 1050324..1051037 Listeria monocytogenes serotype 4b str. CLIP 80459 7703098 YP_002757746.1 CDS Lm4b_01041 NC_012488.1 1051034 1052092 D two-component sensor histidine kinase 1051034..1052092 Listeria monocytogenes serotype 4b str. CLIP 80459 7703099 YP_002757747.1 CDS Lm4b_01042 NC_012488.1 1052089 1052727 D two-component response regulator 1052089..1052727 Listeria monocytogenes serotype 4b str. CLIP 80459 7703100 YP_002757748.1 CDS Lm4b_01043 NC_012488.1 1052746 1053405 D K(+)-uptake system 1052746..1053405 Listeria monocytogenes serotype 4b str. CLIP 80459 7703101 YP_002757749.1 CDS Lm4b_01044 NC_012488.1 1053560 1054480 D hypothetical protein 1053560..1054480 Listeria monocytogenes serotype 4b str. CLIP 80459 7703102 YP_002757750.1 CDS Lm4b_01045 NC_012488.1 1054477 1055328 D hypothetical protein 1054477..1055328 Listeria monocytogenes serotype 4b str. CLIP 80459 7703103 YP_002757751.1 CDS Lm4b_01046 NC_012488.1 1055369 1056334 R LytR protein complement(1055369..1056334) Listeria monocytogenes serotype 4b str. CLIP 80459 7703104 YP_002757752.1 CDS Lm4b_01047 NC_012488.1 1056443 1058110 R hypothetical protein complement(1056443..1058110) Listeria monocytogenes serotype 4b str. CLIP 80459 7703105 YP_002757753.1 CDS Lm4b_01048 NC_012488.1 1058117 1058326 R hypothetical protein complement(1058117..1058326) Listeria monocytogenes serotype 4b str. CLIP 80459 7703106 YP_002757754.1 CDS Lm4b_01049 NC_012488.1 1058810 1059580 D hypothetical protein 1058810..1059580 Listeria monocytogenes serotype 4b str. CLIP 80459 7703107 YP_002757755.1 CDS Lm4b_01050 NC_012488.1 1059628 1060656 R transcriptional regulator, LacI family complement(1059628..1060656) Listeria monocytogenes serotype 4b str. CLIP 80459 7703108 YP_002757756.1 CDS Lm4b_01051 NC_012488.1 1060919 1062322 D hypothetical protein 1060919..1062322 Listeria monocytogenes serotype 4b str. CLIP 80459 7703109 YP_002757757.1 CDS Lm4b_01052 NC_012488.1 1062338 1063162 D transketolase 1062338..1063162 Listeria monocytogenes serotype 4b str. CLIP 80459 7703110 YP_002757758.1 CDS Lm4b_01053 NC_012488.1 1063155 1064102 D transketolase 1063155..1064102 Listeria monocytogenes serotype 4b str. CLIP 80459 7703111 YP_002757759.1 CDS Lm4b_01054 NC_012488.1 1064099 1065562 D glycerol kinase 1064099..1065562 Listeria monocytogenes serotype 4b str. CLIP 80459 7703112 YP_002757760.1 CDS Lm4b_01055 NC_012488.1 1065559 1067415 D phosphotransferase system (PTS) beta-glucoside-specific enzyme IIABC 1065559..1067415 Listeria monocytogenes serotype 4b str. CLIP 80459 7703113 YP_002757761.1 CDS Lm4b_01056 NC_012488.1 1067435 1068700 D hypothetical protein 1067435..1068700 Listeria monocytogenes serotype 4b str. CLIP 80459 7703114 YP_002757762.1 CDS Lm4b_01057 NC_012488.1 1068761 1069564 R hypothetical protein complement(1068761..1069564) Listeria monocytogenes serotype 4b str. CLIP 80459 7703115 YP_002757763.1 CDS Lm4b_01058 NC_012488.1 1069632 1070213 R molybdopterin-guanine dinucleotide biosynthesis protein A complement(1069632..1070213) Listeria monocytogenes serotype 4b str. CLIP 80459 7703116 YP_002757764.1 CDS Lm4b_01059 NC_012488.1 1070194 1070856 R ABC transporter ATP-binding protein complement(1070194..1070856) Listeria monocytogenes serotype 4b str. CLIP 80459 7703117 YP_002757765.1 CDS Lm4b_01060 NC_012488.1 1070859 1071530 R molybdenum ABC transporter (permease) complement(1070859..1071530) Listeria monocytogenes serotype 4b str. CLIP 80459 7703118 YP_002757766.1 CDS Lm4b_01061 NC_012488.1 1071635 1072405 D molybdate ABC transporter binding protein 1071635..1072405 Listeria monocytogenes serotype 4b str. CLIP 80459 7703119 YP_002757767.1 CDS Lm4b_01062 NC_012488.1 1072500 1073723 D molybdopterin biosynthesis protein moeA 1072500..1073723 Listeria monocytogenes serotype 4b str. CLIP 80459 7703120 YP_002757768.1 CDS Lm4b_01063 NC_012488.1 1073702 1074187 D molybdopterin-guanine dinucleotide biosynthesis MobB 1073702..1074187 Listeria monocytogenes serotype 4b str. CLIP 80459 7703121 YP_002757769.1 CDS Lm4b_01064 NC_012488.1 1074184 1074606 D molybdopterin converting factor, subunit 2 1074184..1074606 Listeria monocytogenes serotype 4b str. CLIP 80459 7703122 YP_002757770.1 CDS Lm4b_01065 NC_012488.1 1074590 1074838 D molybdopterin converting factor subunit 1 1074590..1074838 Listeria monocytogenes serotype 4b str. CLIP 80459 7703123 YP_002757771.1 CDS moaC NC_012488.1 1074851 1075333 D MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 1074851..1075333 Listeria monocytogenes serotype 4b str. CLIP 80459 7703124 YP_002757772.1 CDS moaA NC_012488.1 1075362 1076363 D together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 1075362..1076363 Listeria monocytogenes serotype 4b str. CLIP 80459 7702487 YP_002757773.1 CDS Lm4b_01068 NC_012488.1 1076398 1076886 R molybdenum cofactor biosynthesis protein B complement(1076398..1076886) Listeria monocytogenes serotype 4b str. CLIP 80459 7702243 YP_002757774.1 CDS Lm4b_01069 NC_012488.1 1076898 1077896 R molybdopterin biosynthesis protein MoeB complement(1076898..1077896) Listeria monocytogenes serotype 4b str. CLIP 80459 7702244 YP_002757775.1 CDS Lm4b_01070 NC_012488.1 1078028 1078582 D hypothetical protein 1078028..1078582 Listeria monocytogenes serotype 4b str. CLIP 80459 7702245 YP_002757776.1 CDS def NC_012488.1 1078631 1079182 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(1078631..1079182) Listeria monocytogenes serotype 4b str. CLIP 80459 7702246 YP_002757777.1 CDS pdhA NC_012488.1 1080016 1081131 D pyruvate dehydrogenase (E1 alpha subunit) 1080016..1081131 Listeria monocytogenes serotype 4b str. CLIP 80459 7702247 YP_002757778.1 CDS PdhB NC_012488.1 1081134 1082111 D pyruvate dehydrogenase (E1 beta subunit) 1081134..1082111 Listeria monocytogenes serotype 4b str. CLIP 80459 7704040 YP_002757779.1 CDS pdhC NC_012488.1 1082222 1083856 D dihydrolipoamide acetyltransferase 1082222..1083856 Listeria monocytogenes serotype 4b str. CLIP 80459 7704041 YP_002757780.1 CDS PdhD NC_012488.1 1083861 1085264 D E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1083861..1085264 Listeria monocytogenes serotype 4b str. CLIP 80459 7704042 YP_002757781.1 CDS Lm4b_01076 NC_012488.1 1085451 1085762 D hypothetical protein 1085451..1085762 Listeria monocytogenes serotype 4b str. CLIP 80459 7704043 YP_002757782.1 CDS Lm4b_01077 NC_012488.1 1085891 1086844 D L-lactate dehydrogenase 1085891..1086844 Listeria monocytogenes serotype 4b str. CLIP 80459 7702248 YP_002757783.1 CDS Lm4b_01078 NC_012488.1 1086844 1087116 D hypothetical protein 1086844..1087116 Listeria monocytogenes serotype 4b str. CLIP 80459 7702249 YP_002757784.1 CDS Lm4b_01079 NC_012488.1 1087138 1087668 D hypothetical protein 1087138..1087668 Listeria monocytogenes serotype 4b str. CLIP 80459 7702250 YP_002757785.1 CDS Lm4b_01080 NC_012488.1 1087726 1088670 R membrane and transport protein complement(1087726..1088670) Listeria monocytogenes serotype 4b str. CLIP 80459 7702251 YP_002757786.1 CDS Lm4b_01081 NC_012488.1 1088871 1089485 R hypothetical protein complement(1088871..1089485) Listeria monocytogenes serotype 4b str. CLIP 80459 7702252 YP_002757787.1 CDS Lm4b_01082 NC_012488.1 1089616 1090389 D extragenic suppressor protein SuhB and to myo-inositol-1(or 4)-monophosphatase 1089616..1090389 Listeria monocytogenes serotype 4b str. CLIP 80459 7702253 YP_002757788.1 CDS Lm4b_01083 NC_012488.1 1090581 1092419 D GTP-binding elongation factor 1090581..1092419 Listeria monocytogenes serotype 4b str. CLIP 80459 7702254 YP_002757789.1 CDS Lm4b_01084 NC_012488.1 1092594 1093472 D hypothetical protein 1092594..1093472 Listeria monocytogenes serotype 4b str. CLIP 80459 7702255 YP_002757790.1 CDS Lm4b_01085 NC_012488.1 1093504 1093734 R hypothetical protein complement(1093504..1093734) Listeria monocytogenes serotype 4b str. CLIP 80459 7702256 YP_002757791.1 CDS Lm4b_01086 NC_012488.1 1093940 1094221 D depletion of this protein in Bacillus subtilis results in defects in cell morphology; crystal structure of Staphylococcus protein shows homodimer; putative ligand binding protein; hypothetical protein 1093940..1094221 Listeria monocytogenes serotype 4b str. CLIP 80459 7702257 YP_002757792.1 CDS Lm4b_01087 NC_012488.1 1094403 1095605 D cell-division protein RodA and FtsW 1094403..1095605 Listeria monocytogenes serotype 4b str. CLIP 80459 7702258 YP_002757793.1 CDS pycA NC_012488.1 1095883 1099323 D biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 1095883..1099323 Listeria monocytogenes serotype 4b str. CLIP 80459 7702259 YP_002757794.1 CDS Lm4b_01089 NC_012488.1 1099477 1100370 D metal binding protein (ABC transporter) 1099477..1100370 Listeria monocytogenes serotype 4b str. CLIP 80459 7704090 YP_002757795.1 CDS Lm4b_01090 NC_012488.1 1100652 1101455 D teichoic acid translocation permease protein TagG 1100652..1101455 Listeria monocytogenes serotype 4b str. CLIP 80459 7702260 YP_002757796.1 CDS Lm4b_01091 NC_012488.1 1101468 1102475 D teichoic acid translocation ATP-binding protein TagH (ABC transporter) 1101468..1102475 Listeria monocytogenes serotype 4b str. CLIP 80459 7702261 YP_002757797.1 CDS Lm4b_01092 NC_012488.1 1102698 1105022 D autolysin (N-acetylmuramoyl-L-alanine amidase) 1102698..1105022 Listeria monocytogenes serotype 4b str. CLIP 80459 7702262 YP_002757798.1 CDS Lm4b_01093 NC_012488.1 1105085 1107091 R hypothetical protein complement(1105085..1107091) Listeria monocytogenes serotype 4b str. CLIP 80459 7702263 YP_002757799.1 CDS Lm4b_01094 NC_012488.1 1107383 1108366 D dolichol phosphate mannose synthase 1107383..1108366 Listeria monocytogenes serotype 4b str. CLIP 80459 7702264 YP_002757800.1 CDS Lm4b_01095 NC_012488.1 1108378 1110480 D hypothetical protein 1108378..1110480 Listeria monocytogenes serotype 4b str. CLIP 80459 7702265 YP_002757801.1 CDS Lm4b_01096 NC_012488.1 1110511 1112835 D hypothetical protein 1110511..1112835 Listeria monocytogenes serotype 4b str. CLIP 80459 7702266 YP_002757802.1 CDS Lm4b_01097 NC_012488.1 1112832 1113842 D hypothetical protein 1112832..1113842 Listeria monocytogenes serotype 4b str. CLIP 80459 7702268 YP_002757803.1 CDS Lm4b_01098 NC_012488.1 1113891 1114778 R UDP-glucose pyrophosphorylase complement(1113891..1114778) Listeria monocytogenes serotype 4b str. CLIP 80459 7702269 YP_002757804.1 CDS ispD NC_012488.1 1115002 1115715 D 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1115002..1115715 Listeria monocytogenes serotype 4b str. CLIP 80459 7702270 YP_002757805.1 CDS Lm4b_01100 NC_012488.1 1115708 1116733 D glucitol dehydrogenase 1115708..1116733 Listeria monocytogenes serotype 4b str. CLIP 80459 7702271 YP_002757806.1 CDS Lm4b_01101 NC_012488.1 1116876 1118255 D galactosamine-containing minor teichoic acid biosynthesis protein GgaA 1116876..1118255 Listeria monocytogenes serotype 4b str. CLIP 80459 7702272 YP_002757807.1 CDS Lm4b_01102 NC_012488.1 1118255 1119409 D CDP- glycerol:poly(glycerophosphate)glycerophosphotransferase 1118255..1119409 Listeria monocytogenes serotype 4b str. CLIP 80459 7702274 YP_002757808.1 CDS Lm4b_01103 NC_012488.1 1119413 1120573 D teichoic acid biosynthesis protein B precursor 1119413..1120573 Listeria monocytogenes serotype 4b str. CLIP 80459 7702275 YP_002757809.1 CDS tagD NC_012488.1 1120638 1121021 D glycerol-3-phosphate cytidylyltransferase (gct) 1120638..1121021 Listeria monocytogenes serotype 4b str. CLIP 80459 7702276 YP_002757810.1 CDS Lm4b_01105 NC_012488.1 1121139 1122629 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1121139..1122629 Listeria monocytogenes serotype 4b str. CLIP 80459 7701595 YP_002757811.1 CDS nadE NC_012488.1 1122641 1123465 D catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1122641..1123465 Listeria monocytogenes serotype 4b str. CLIP 80459 7702277 YP_002757812.1 CDS Lm4b_01107 NC_012488.1 1123478 1123786 D hypothetical protein 1123478..1123786 Listeria monocytogenes serotype 4b str. CLIP 80459 7702278 YP_002757813.1 CDS Lm4b_01108 NC_012488.1 1123846 1124250 D PTS system, cellobiose-specific IIB component (cel A) 1123846..1124250 Listeria monocytogenes serotype 4b str. CLIP 80459 7702279 YP_002757814.1 CDS guaA NC_012488.1 1124379 1125935 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1124379..1125935 Listeria monocytogenes serotype 4b str. CLIP 80459 7702280 YP_002757815.1 CDS Lm4b_01110 NC_012488.1 1126226 1126582 D hypothetical protein 1126226..1126582 Listeria monocytogenes serotype 4b str. CLIP 80459 7702953 YP_002757816.1 CDS Lm4b_01111 NC_012488.1 1127334 1128227 D ABC transporter ATP-binding protein 1127334..1128227 Listeria monocytogenes serotype 4b str. CLIP 80459 7702281 YP_002757817.1 CDS Lm4b_01112b NC_012488.1 1128227 1128976 D ABC transporter permease 1128227..1128976 Listeria monocytogenes serotype 4b str. CLIP 80459 7702283 YP_002757818.1 CDS Lm4b_01113 NC_012488.1 1129017 1129334 D hypothetical protein 1129017..1129334 Listeria monocytogenes serotype 4b str. CLIP 80459 7702284 YP_002757819.1 CDS Lm4b_01114 NC_012488.1 1129331 1130206 D streptolysin S associated ORF sagB 1129331..1130206 Listeria monocytogenes serotype 4b str. CLIP 80459 7702286 YP_002757820.1 CDS Lm4b_01115 NC_012488.1 1130214 1131131 D hypothetical protein 1130214..1131131 Listeria monocytogenes serotype 4b str. CLIP 80459 7702288 YP_002757821.1 CDS Lm4b_01116b NC_012488.1 1131124 1132437 D hypothetical protein 1131124..1132437 Listeria monocytogenes serotype 4b str. CLIP 80459 7702290 YP_002757822.1 CDS Lm4b_01117 NC_012488.1 1132430 1133017 D hypothetical protein 1132430..1133017 Listeria monocytogenes serotype 4b str. CLIP 80459 7702291 YP_002757823.1 CDS Lm4b_01118 NC_012488.1 1133262 1134035 D regulatory protein 1133262..1134035 Listeria monocytogenes serotype 4b str. CLIP 80459 7702292 YP_002757824.1 CDS Lm4b_01119 NC_012488.1 1134100 1134456 D hypothetical protein 1134100..1134456 Listeria monocytogenes serotype 4b str. CLIP 80459 7702293 YP_002757825.1 CDS Lm4b_01120 NC_012488.1 1135428 1136267 R hypothetical protein complement(1135428..1136267) Listeria monocytogenes serotype 4b str. CLIP 80459 7702294 YP_002757826.1 CDS Lm4b_01121 NC_012488.1 1136383 1137744 R ABC transporter ATP-binding protein complement(1136383..1137744) Listeria monocytogenes serotype 4b str. CLIP 80459 7702295 YP_002757827.1 CDS Lm4b_01122 NC_012488.1 1138343 1138456 D hypothetical protein 1138343..1138456 Listeria monocytogenes serotype 4b str. CLIP 80459 7702296 YP_002757828.1 CDS Lm4b_01123b NC_012488.1 1138384 1138542 D hypothetical protein 1138384..1138542 Listeria monocytogenes serotype 4b str. CLIP 80459 7702298 YP_002757829.1 CDS Lm4b_01124 NC_012488.1 1138651 1139250 D hypothetical protein 1138651..1139250 Listeria monocytogenes serotype 4b str. CLIP 80459 7702299 YP_002757830.1 CDS Lm4b_01125 NC_012488.1 1139545 1139880 D hypothetical protein 1139545..1139880 Listeria monocytogenes serotype 4b str. CLIP 80459 7702300 YP_002757831.1 CDS Lm4b_01127 NC_012488.1 1140525 1140827 D hypothetical protein 1140525..1140827 Listeria monocytogenes serotype 4b str. CLIP 80459 7702302 YP_002757832.1 CDS Lm4b_01128 NC_012488.1 1141070 1141522 D hypothetical protein 1141070..1141522 Listeria monocytogenes serotype 4b str. CLIP 80459 7702303 YP_002757833.1 CDS Lm4b_01129 NC_012488.1 1141512 1141967 D hypothetical protein 1141512..1141967 Listeria monocytogenes serotype 4b str. CLIP 80459 7702304 YP_002757834.1 CDS Lm4b_01130 NC_012488.1 1141981 1143003 R hypothetical protein complement(1141981..1143003) Listeria monocytogenes serotype 4b str. CLIP 80459 7702305 YP_002757835.1 CDS Lm4b_01131 NC_012488.1 1142976 1143572 R hypothetical protein complement(1142976..1143572) Listeria monocytogenes serotype 4b str. CLIP 80459 7702306 YP_002757836.1 CDS Lm4b_01132 NC_012488.1 1143569 1144288 R transcription regulator complement(1143569..1144288) Listeria monocytogenes serotype 4b str. CLIP 80459 7702307 YP_002757837.1 CDS Lm4b_01133 NC_012488.1 1144539 1146254 D ABC transporter ATP-binding protein 1144539..1146254 Listeria monocytogenes serotype 4b str. CLIP 80459 7702308 YP_002757838.1 CDS Lm4b_01134 NC_012488.1 1146256 1147902 D ABC transporter ATP-binding protein 1146256..1147902 Listeria monocytogenes serotype 4b str. CLIP 80459 7702309 YP_002757839.1 CDS Lm4b_01135 NC_012488.1 1147939 1148247 R hypothetical protein complement(1147939..1148247) Listeria monocytogenes serotype 4b str. CLIP 80459 7702310 YP_002757840.1 CDS Lm4b_01136 NC_012488.1 1148315 1148662 D regulatory protein 1148315..1148662 Listeria monocytogenes serotype 4b str. CLIP 80459 7702311 YP_002757841.1 CDS Lm4b_01137 NC_012488.1 1148687 1149826 D hypothetical protein 1148687..1149826 Listeria monocytogenes serotype 4b str. CLIP 80459 7702312 YP_002757842.1 CDS Lm4b_01139 NC_012488.1 1150647 1151726 D hypothetical protein 1150647..1151726 Listeria monocytogenes serotype 4b str. CLIP 80459 7702314 YP_002757843.1 CDS Lm4b_01140 NC_012488.1 1151761 1152231 D hypothetical protein 1151761..1152231 Listeria monocytogenes serotype 4b str. CLIP 80459 7702315 YP_002757844.1 CDS Lm4b_01141b NC_012488.1 1152228 1152518 D hypothetical protein 1152228..1152518 Listeria monocytogenes serotype 4b str. CLIP 80459 7702317 YP_002757845.1 CDS Lm4b_01142 NC_012488.1 1152798 1154342 D hypothetical protein 1152798..1154342 Listeria monocytogenes serotype 4b str. CLIP 80459 7702318 YP_002757846.1 CDS Lm4b_01143 NC_012488.1 1154377 1154724 R hypothetical protein complement(1154377..1154724) Listeria monocytogenes serotype 4b str. CLIP 80459 7702319 YP_002757847.1 CDS Lm4b_01144 NC_012488.1 1154789 1155361 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(1154789..1155361) Listeria monocytogenes serotype 4b str. CLIP 80459 7702320 YP_002757848.1 CDS Lm4b_01145 NC_012488.1 1155491 1155898 R hypothetical protein complement(1155491..1155898) Listeria monocytogenes serotype 4b str. CLIP 80459 7702321 YP_002757849.1 CDS Lm4b_01146 NC_012488.1 1155990 1156469 D uroporphyrin-III C-methyltransferase 1155990..1156469 Listeria monocytogenes serotype 4b str. CLIP 80459 7702322 YP_002757850.1 CDS Lm4b_01147 NC_012488.1 1156597 1157952 D PduS protein 1156597..1157952 Listeria monocytogenes serotype 4b str. CLIP 80459 7702323 YP_002757851.1 CDS Lm4b_01148 NC_012488.1 1157949 1158503 D PduT protein 1157949..1158503 Listeria monocytogenes serotype 4b str. CLIP 80459 7702484 YP_002757852.1 CDS Lm4b_01149 NC_012488.1 1158651 1159001 D PduU protein 1158651..1159001 Listeria monocytogenes serotype 4b str. CLIP 80459 7703287 YP_002757853.1 CDS Lm4b_01150b NC_012488.1 1159007 1159438 D PduV protein 1159007..1159438 Listeria monocytogenes serotype 4b str. CLIP 80459 7703289 YP_002757854.1 CDS Lm4b_01151 NC_012488.1 1159463 1160206 D hypothetical protein 1159463..1160206 Listeria monocytogenes serotype 4b str. CLIP 80459 7703290 YP_002757855.1 CDS Lm4b_01152 NC_012488.1 1160199 1160756 D bifunctional cobalamin biosynthesis protein CopB 1160199..1160756 Listeria monocytogenes serotype 4b str. CLIP 80459 7703291 YP_002757856.1 CDS Lm4b_01153 NC_012488.1 1160758 1161504 D cobalamin (5'-phosphatase) synthetase 1160758..1161504 Listeria monocytogenes serotype 4b str. CLIP 80459 7703292 YP_002757857.1 CDS Lm4b_01154 NC_012488.1 1161505 1162080 D alpha-ribazole-5'-phosphatase 1161505..1162080 Listeria monocytogenes serotype 4b str. CLIP 80459 7703293 YP_002757858.1 CDS Lm4b_01155 NC_012488.1 1162490 1163374 R regulatory protein complement(1162490..1163374) Listeria monocytogenes serotype 4b str. CLIP 80459 7703294 YP_002757859.1 CDS Lm4b_01156 NC_012488.1 1163677 1163964 D PduA protein 1163677..1163964 Listeria monocytogenes serotype 4b str. CLIP 80459 7703295 YP_002757860.1 CDS Lm4b_01157b NC_012488.1 1163957 1164760 D PduB protein 1163957..1164760 Listeria monocytogenes serotype 4b str. CLIP 80459 7703297 YP_002757861.1 CDS Lm4b_01158 NC_012488.1 1164779 1166443 D propanediol dehydratase, alpha subunit 1164779..1166443 Listeria monocytogenes serotype 4b str. CLIP 80459 7703298 YP_002757862.1 CDS Lm4b_01159 NC_012488.1 1166481 1167140 D diol dehydrase (diol dehydratase) gamma subunit 1166481..1167140 Listeria monocytogenes serotype 4b str. CLIP 80459 7703299 YP_002757863.1 CDS Lm4b_01160 NC_012488.1 1167157 1167669 D diol dehydrase (diol dehydratase) gamma subunit (pddC) 1167157..1167669 Listeria monocytogenes serotype 4b str. CLIP 80459 7703300 YP_002757864.1 CDS Lm4b_01161 NC_012488.1 1167715 1169535 D diol dehydratase-reactivating factor large subunit 1167715..1169535 Listeria monocytogenes serotype 4b str. CLIP 80459 7703301 YP_002757865.1 CDS Lm4b_01162 NC_012488.1 1169532 1169879 D diol dehydratase-reactivating factor small chain 1169532..1169879 Listeria monocytogenes serotype 4b str. CLIP 80459 7703302 YP_002757866.1 CDS Lm4b_01163 NC_012488.1 1169892 1170329 D PduK protein 1169892..1170329 Listeria monocytogenes serotype 4b str. CLIP 80459 7703303 YP_002757867.1 CDS Lm4b_01164 NC_012488.1 1170354 1170629 D carboxysome structural protein 1170354..1170629 Listeria monocytogenes serotype 4b str. CLIP 80459 7703304 YP_002757868.1 CDS Lm4b_01165 NC_012488.1 1170633 1171268 D PduL protein 1170633..1171268 Listeria monocytogenes serotype 4b str. CLIP 80459 7703305 YP_002757869.1 CDS Lm4b_01166 NC_012488.1 1171289 1172128 D ethanolamine utilization protein EutJ 1171289..1172128 Listeria monocytogenes serotype 4b str. CLIP 80459 7703306 YP_002757870.1 CDS Lm4b_01167 NC_012488.1 1172125 1172604 D hypothetical protein 1172125..1172604 Listeria monocytogenes serotype 4b str. CLIP 80459 7703307 YP_002757871.1 CDS Lm4b_01168 NC_012488.1 1172609 1172872 D carbon dioxide concentrating mechanism protein 1172609..1172872 Listeria monocytogenes serotype 4b str. CLIP 80459 7703308 YP_002757872.1 CDS Lm4b_01169 NC_012488.1 1172887 1173882 D PduO protein 1172887..1173882 Listeria monocytogenes serotype 4b str. CLIP 80459 7703309 YP_002757873.1 CDS Lm4b_01170 NC_012488.1 1173889 1175298 D ethanolamine utilization protein EutE 1173889..1175298 Listeria monocytogenes serotype 4b str. CLIP 80459 7703310 YP_002757874.1 CDS Lm4b_01171 NC_012488.1 1175314 1176432 D NADPH-dependent butanol dehydrogenase 1175314..1176432 Listeria monocytogenes serotype 4b str. CLIP 80459 7703311 YP_002757875.1 CDS glpF NC_012488.1 1176460 1177164 D glycerol uptake facilitator protein 1176460..1177164 Listeria monocytogenes serotype 4b str. CLIP 80459 7703312 YP_002757876.1 CDS AckA2 NC_012488.1 1177230 1178423 D acetate kinase 1177230..1178423 Listeria monocytogenes serotype 4b str. CLIP 80459 7702939 YP_002757877.1 CDS cobD NC_012488.1 1178437 1179522 D cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; threonine-phosphate decarboxylase 1178437..1179522 Listeria monocytogenes serotype 4b str. CLIP 80459 7704357 YP_002757878.1 CDS Lm4b_01175 NC_012488.1 1179512 1180387 D PduX protein 1179512..1180387 Listeria monocytogenes serotype 4b str. CLIP 80459 7703247 YP_002757879.1 CDS pduQ NC_012488.1 1180977 1182116 D NADPH-dependent butanol dehydrogenase 1180977..1182116 Listeria monocytogenes serotype 4b str. CLIP 80459 7703313 YP_002757880.1 CDS Lm4b_01177 NC_012488.1 1182391 1182972 D two-component response regulator 1182391..1182972 Listeria monocytogenes serotype 4b str. CLIP 80459 7704045 YP_002757881.1 CDS Lm4b_01178 NC_012488.1 1182965 1184422 D two-component sensor histidine kinase 1182965..1184422 Listeria monocytogenes serotype 4b str. CLIP 80459 7703314 YP_002757882.1 CDS eutA NC_012488.1 1184512 1185933 D ethanolamine utilization protein EutA; reactivating factor for ethanolamine ammonia lyase 1184512..1185933 Listeria monocytogenes serotype 4b str. CLIP 80459 7703315 YP_002757883.1 CDS eutB NC_012488.1 1185975 1187339 D ethanolamine ammonia-lyase, heavy chain 1185975..1187339 Listeria monocytogenes serotype 4b str. CLIP 80459 7702894 YP_002757884.1 CDS eutC NC_012488.1 1187359 1188240 D catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit 1187359..1188240 Listeria monocytogenes serotype 4b str. CLIP 80459 7702895 YP_002757885.1 CDS Lm4b_01182 NC_012488.1 1188263 1188916 D carboxysome structural protein (eutL) 1188263..1188916 Listeria monocytogenes serotype 4b str. CLIP 80459 7702896 YP_002757886.1 CDS Lm4b_01183 NC_012488.1 1188931 1189452 D carboxysome structural protein 1188931..1189452 Listeria monocytogenes serotype 4b str. CLIP 80459 7703316 YP_002757887.1 CDS Lm4b_01184 NC_012488.1 1189452 1190912 D acetaldehyde dehydrogenase / alcohol dehydrogenase 1189452..1190912 Listeria monocytogenes serotype 4b str. CLIP 80459 7703317 YP_002757888.1 CDS Lm4b_01185 NC_012488.1 1190944 1191228 D carboxysome structural protein 1190944..1191228 Listeria monocytogenes serotype 4b str. CLIP 80459 7703318 YP_002757889.1 CDS Lm4b_01186 NC_012488.1 1191394 1192149 D cobalamin adenosyl transferase 1191394..1192149 Listeria monocytogenes serotype 4b str. CLIP 80459 7703319 YP_002757890.1 CDS Lm4b_01187 NC_012488.1 1192162 1192803 D PduL protein 1192162..1192803 Listeria monocytogenes serotype 4b str. CLIP 80459 7703320 YP_002757891.1 CDS Lm4b_01188 NC_012488.1 1192800 1193372 D hypothetical protein 1192800..1193372 Listeria monocytogenes serotype 4b str. CLIP 80459 7703321 YP_002757892.1 CDS Lm4b_01189 NC_012488.1 1193387 1193656 D carbon dioxide concentrating mechanism protein 1193387..1193656 Listeria monocytogenes serotype 4b str. CLIP 80459 7703322 YP_002757893.1 CDS Lm4b_01190 NC_012488.1 1193649 1194194 D PduT protein 1193649..1194194 Listeria monocytogenes serotype 4b str. CLIP 80459 7703323 YP_002757894.1 CDS Lm4b_01191 NC_012488.1 1194210 1195331 D ethanolamine utilization protein EutH 1194210..1195331 Listeria monocytogenes serotype 4b str. CLIP 80459 7703324 YP_002757895.1 CDS Lm4b_01192 NC_012488.1 1195324 1195767 D ethanolamine utilization protein EutQ 1195324..1195767 Listeria monocytogenes serotype 4b str. CLIP 80459 7703325 YP_002757896.1 CDS Lm4b_01193 NC_012488.1 1195809 1196360 R transcriptional regulator complement(1195809..1196360) Listeria monocytogenes serotype 4b str. CLIP 80459 7703326 YP_002757897.1 CDS Lm4b_01194 NC_012488.1 1196674 1197168 D hypothetical protein 1196674..1197168 Listeria monocytogenes serotype 4b str. CLIP 80459 7703327 YP_002757898.1 CDS cbiA NC_012488.1 1197501 1198859 D responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 1197501..1198859 Listeria monocytogenes serotype 4b str. CLIP 80459 7703328 YP_002757899.1 CDS cobD NC_012488.1 1198856 1199803 D CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 1198856..1199803 Listeria monocytogenes serotype 4b str. CLIP 80459 7703219 YP_002757900.1 CDS cbiC NC_012488.1 1199816 1200448 D catalyzes the interconversion of cobalt-precorrin-8X and cobyrinic acid in the anaerobic biosynthesis of cobalamin; cobalt-precorrin-8X methylmutase 1199816..1200448 Listeria monocytogenes serotype 4b str. CLIP 80459 7703329 YP_002757901.1 CDS cbiD NC_012488.1 1200464 1201585 D Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 1200464..1201585 Listeria monocytogenes serotype 4b str. CLIP 80459 7703330 YP_002757902.1 CDS cbiE NC_012488.1 1201582 1202178 D catalyzes the methylation of C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W-a; cobalt-precorrin-6Y C(5)-methyltransferase 1201582..1202178 Listeria monocytogenes serotype 4b str. CLIP 80459 7703220 YP_002757903.1 CDS Lm4b_01200 NC_012488.1 1202168 1202737 D catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W; decarboxylating; cobalt-precorrin-6Y C(15)-methyltransferase 1202168..1202737 Listeria monocytogenes serotype 4b str. CLIP 80459 7703221 YP_002757904.1 CDS cbiF NC_012488.1 1202743 1203492 D precorrin-3 methylase 1202743..1203492 Listeria monocytogenes serotype 4b str. CLIP 80459 7703222 YP_002757905.1 CDS cbiG NC_012488.1 1203479 1204510 D catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3; cobalamin biosynthesis protein CbiG 1203479..1204510 Listeria monocytogenes serotype 4b str. CLIP 80459 7703223 YP_002757906.1 CDS cbiH NC_012488.1 1204507 1205232 D precorrin methylase 1204507..1205232 Listeria monocytogenes serotype 4b str. CLIP 80459 7703224 YP_002757907.1 CDS Lm4b_01204 NC_012488.1 1205229 1205981 D cobalamin biosynthesis J protein CbiJ 1205229..1205981 Listeria monocytogenes serotype 4b str. CLIP 80459 7703225 YP_002757908.1 CDS Lm4b_01205 NC_012488.1 1205981 1207462 D uroporphyrinogen-III methyltransferase/uroporphyrinogen-III synthase 1205981..1207462 Listeria monocytogenes serotype 4b str. CLIP 80459 7703332 YP_002757909.1 CDS cbiK NC_012488.1 1207459 1208244 D anaerobic Cobalt Chelatase In Cobalamin Biosynthesis 1207459..1208244 Listeria monocytogenes serotype 4b str. CLIP 80459 7703333 YP_002757910.1 CDS cbiL NC_012488.1 1208237 1208947 D catalyzes the formation of precorrin-3A from precorrin-2; cobalt-precorrin-2 C(20)-methyltransferase 1208237..1208947 Listeria monocytogenes serotype 4b str. CLIP 80459 7703226 YP_002757911.1 CDS Lm4b_01208 NC_012488.1 1208944 1209678 D catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM 1208944..1209678 Listeria monocytogenes serotype 4b str. CLIP 80459 7703227 YP_002757912.1 CDS Lm4b_01209 NC_012488.1 1209675 1209971 D periplasmic cobalt binding component of the cobalt transport system; cobalt transport protein CbiN 1209675..1209971 Listeria monocytogenes serotype 4b str. CLIP 80459 7703334 YP_002757913.1 CDS cbiQ NC_012488.1 1209958 1210635 D cobalt transport protein Q 1209958..1210635 Listeria monocytogenes serotype 4b str. CLIP 80459 7703335 YP_002757914.1 CDS Lm4b_01211 NC_012488.1 1210648 1211454 D cobalt transport ATP-binding protein CbiO 1210648..1211454 Listeria monocytogenes serotype 4b str. CLIP 80459 7703229 YP_002757915.1 CDS cbiP NC_012488.1 1211454 1212989 D catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 1211454..1212989 Listeria monocytogenes serotype 4b str. CLIP 80459 7703336 YP_002757916.1 CDS Lm4b_01213 NC_012488.1 1212953 1213519 D hypothetical protein 1212953..1213519 Listeria monocytogenes serotype 4b str. CLIP 80459 7703228 YP_002757917.1 CDS Lm4b_01214 NC_012488.1 1213564 1214031 R hypothetical protein complement(1213564..1214031) Listeria monocytogenes serotype 4b str. CLIP 80459 7703337 YP_002757918.1 CDS Lm4b_01215 NC_012488.1 1214046 1214495 R hypothetical protein complement(1214046..1214495) Listeria monocytogenes serotype 4b str. CLIP 80459 7703338 YP_002757919.1 CDS Lm4b_01217 NC_012488.1 1214584 1215114 D hypothetical protein 1214584..1215114 Listeria monocytogenes serotype 4b str. CLIP 80459 7703339 YP_002757920.1 CDS Lm4b_01218 NC_012488.1 1215145 1215456 D hypothetical protein 1215145..1215456 Listeria monocytogenes serotype 4b str. CLIP 80459 7703340 YP_002757921.1 CDS Lm4b_01219 NC_012488.1 1215459 1216016 D hypothetical protein 1215459..1216016 Listeria monocytogenes serotype 4b str. CLIP 80459 7703342 YP_002757922.1 CDS Lm4b_01220 NC_012488.1 1216351 1217220 D N-acetylmuramoyl-L-alanine amidase (autolysin) 1216351..1217220 Listeria monocytogenes serotype 4b str. CLIP 80459 7703343 YP_002757923.1 CDS Lm4b_01221 NC_012488.1 1217517 1218503 D N-acetylmuramoyl-L-alanine amidase (autolysin) 1217517..1218503 Listeria monocytogenes serotype 4b str. CLIP 80459 7703344 YP_002757924.1 CDS Lm4b_01222 NC_012488.1 1218615 1219694 D hypothetical protein 1218615..1219694 Listeria monocytogenes serotype 4b str. CLIP 80459 7703345 YP_002757925.1 CDS Lm4b_01223 NC_012488.1 1219720 1220478 D rRNA methylase 1219720..1220478 Listeria monocytogenes serotype 4b str. CLIP 80459 7703346 YP_002757926.1 CDS Lm4b_01224 NC_012488.1 1220523 1220882 R hypothetical protein complement(1220523..1220882) Listeria monocytogenes serotype 4b str. CLIP 80459 7703347 YP_002757927.1 CDS Lm4b_01225 NC_012488.1 1221039 1221362 D hypothetical protein 1221039..1221362 Listeria monocytogenes serotype 4b str. CLIP 80459 7703348 YP_002757928.1 CDS pheS NC_012488.1 1221730 1222782 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1221730..1222782 Listeria monocytogenes serotype 4b str. CLIP 80459 7703349 YP_002757929.1 CDS pheT NC_012488.1 1222782 1225190 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1222782..1225190 Listeria monocytogenes serotype 4b str. CLIP 80459 7704054 YP_002757930.1 CDS Lm4b_01228 NC_012488.1 1225351 1226052 D ABC transporter ATP-binding protein 1225351..1226052 Listeria monocytogenes serotype 4b str. CLIP 80459 7704055 YP_002757931.1 CDS Lm4b_01229 NC_012488.1 1226066 1229476 D hypothetical protein 1226066..1229476 Listeria monocytogenes serotype 4b str. CLIP 80459 7703350 YP_002757932.1 CDS Lm4b_01230 NC_012488.1 1229574 1230026 D transcription regulator MarR 1229574..1230026 Listeria monocytogenes serotype 4b str. CLIP 80459 7703351 YP_002757933.1 CDS Lm4b_01231 NC_012488.1 1230042 1233242 D transporter 1230042..1233242 Listeria monocytogenes serotype 4b str. CLIP 80459 7703352 YP_002757934.1 CDS Lm4b_01232 NC_012488.1 1233346 1234020 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 1233346..1234020 Listeria monocytogenes serotype 4b str. CLIP 80459 7703353 YP_002757935.1 CDS rnhC NC_012488.1 1234058 1234984 R An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease HIII complement(1234058..1234984) Listeria monocytogenes serotype 4b str. CLIP 80459 7703354 YP_002757936.1 CDS Lm4b_01234 NC_012488.1 1235138 1235401 D Cell division protein zapA 1235138..1235401 Listeria monocytogenes serotype 4b str. CLIP 80459 7702598 YP_002757937.1 CDS Lm4b_01235 NC_012488.1 1235401 1235943 D hypothetical protein 1235401..1235943 Listeria monocytogenes serotype 4b str. CLIP 80459 7703355 YP_002757938.1 CDS Lm4b_01236 NC_012488.1 1236035 1237747 D hypothetical protein 1236035..1237747 Listeria monocytogenes serotype 4b str. CLIP 80459 7703356 YP_002757939.1 CDS Lm4b_01237 NC_012488.1 1237770 1240127 D MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein 1237770..1240127 Listeria monocytogenes serotype 4b str. CLIP 80459 7703357 YP_002757940.1 CDS trxA NC_012488.1 1240208 1240519 D thioredoxin 1240208..1240519 Listeria monocytogenes serotype 4b str. CLIP 80459 7703358 YP_002757941.1 CDS uvrC NC_012488.1 1240595 1242406 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1240595..1242406 Listeria monocytogenes serotype 4b str. CLIP 80459 7701618 YP_002757942.1 CDS Lm4b_01240 NC_012488.1 1242587 1243801 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1242587..1243801 Listeria monocytogenes serotype 4b str. CLIP 80459 7701629 YP_002757943.1 CDS Lm4b_01241 NC_012488.1 1243857 1244351 R hypothetical protein complement(1243857..1244351) Listeria monocytogenes serotype 4b str. CLIP 80459 7703359 YP_002757944.1 CDS racE NC_012488.1 1244499 1245299 D converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 1244499..1245299 Listeria monocytogenes serotype 4b str. CLIP 80459 7703360 YP_002757945.1 CDS rph NC_012488.1 1245312 1246058 D RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 1245312..1246058 Listeria monocytogenes serotype 4b str. CLIP 80459 7702583 YP_002757946.1 CDS Lm4b_01244 NC_012488.1 1246062 1246673 D hydrolyzes non-standard nucleotides such as xanthine and inosine; nucleoside-triphosphatase 1246062..1246673 Listeria monocytogenes serotype 4b str. CLIP 80459 7703361 YP_002757947.1 CDS Lm4b_01245 NC_012488.1 1246710 1247234 D hypothetical protein 1246710..1247234 Listeria monocytogenes serotype 4b str. CLIP 80459 7703362 YP_002757948.1 CDS Lm4b_01246 NC_012488.1 1248018 1248491 D gpI 1248018..1248491 Listeria monocytogenes serotype 4b str. CLIP 80459 7704303 YP_002757949.1 CDS Lm4b_01247 NC_012488.1 1248597 1248959 D Gp2 1248597..1248959 Listeria monocytogenes serotype 4b str. CLIP 80459 7703364 YP_002757950.1 CDS Lm4b_01248 NC_012488.1 1249627 1253316 D internalin protein (LPXTG motif) 1249627..1253316 Listeria monocytogenes serotype 4b str. CLIP 80459 7701856 YP_002757951.1 CDS Lm4b_01249 NC_012488.1 1253439 1254797 D hypothetical protein 1253439..1254797 Listeria monocytogenes serotype 4b str. CLIP 80459 7701857 YP_002757952.1 CDS Lm4b_01250 NC_012488.1 1254840 1255433 R hypothetical protein complement(1254840..1255433) Listeria monocytogenes serotype 4b str. CLIP 80459 7701858 YP_002757953.1 CDS Lm4b_01251 NC_012488.1 1255570 1255977 R hypothetical protein complement(1255570..1255977) Listeria monocytogenes serotype 4b str. CLIP 80459 7701859 YP_002757954.1 CDS Lm4b_01252 NC_012488.1 1256142 1256741 D phosphoglycerate mutase 1 1256142..1256741 Listeria monocytogenes serotype 4b str. CLIP 80459 7701860 YP_002757955.1 CDS Lm4b_01253 NC_012488.1 1256773 1257033 R hypothetical protein complement(1256773..1257033) Listeria monocytogenes serotype 4b str. CLIP 80459 7701861 YP_002757956.1 CDS Lm4b_01254 NC_012488.1 1257157 1258569 D ATP-dependent RNA helicase (DEAD motif) 1257157..1258569 Listeria monocytogenes serotype 4b str. CLIP 80459 7701862 YP_002757957.1 CDS Lm4b_01255 NC_012488.1 1258594 1258857 D hypothetical protein 1258594..1258857 Listeria monocytogenes serotype 4b str. CLIP 80459 7701863 YP_002757958.1 CDS Lm4b_01256 NC_012488.1 1259025 1259501 D 8-oxo-dGTPase (mutT) 1259025..1259501 Listeria monocytogenes serotype 4b str. CLIP 80459 7701864 YP_002757959.1 CDS Lm4b_01257 NC_012488.1 1259539 1259784 R hypothetical protein complement(1259539..1259784) Listeria monocytogenes serotype 4b str. CLIP 80459 7701865 YP_002757960.1 CDS Lm4b_01258 NC_012488.1 1259781 1260986 R antibiotic resistance protein complement(1259781..1260986) Listeria monocytogenes serotype 4b str. CLIP 80459 7701866 YP_002757961.1 CDS Lm4b_01259 NC_012488.1 1261191 1261850 D regulator of the Fnr CRP family (including PrfA) 1261191..1261850 Listeria monocytogenes serotype 4b str. CLIP 80459 7701867 YP_002757962.1 CDS Lm4b_01261 NC_012488.1 1262151 1262999 R hypothetical protein complement(1262151..1262999) Listeria monocytogenes serotype 4b str. CLIP 80459 7701868 YP_002757963.1 CDS Lm4b_01263 NC_012488.1 1263617 1264330 D GntR family transcriptional regulator 1263617..1264330 Listeria monocytogenes serotype 4b str. CLIP 80459 7701869 YP_002757964.1 CDS Lm4b_01264 NC_012488.1 1264361 1266007 R alpha,alpha-phosphotrehalase complement(1264361..1266007) Listeria monocytogenes serotype 4b str. CLIP 80459 7701870 YP_002757965.1 CDS Lm4b_01265 NC_012488.1 1266026 1267510 R PTS system trehalose specific enzyme IIBC complement(1266026..1267510) Listeria monocytogenes serotype 4b str. CLIP 80459 7701871 YP_002757966.1 CDS Lm4b_01266 NC_012488.1 1267628 1268089 D hypothetical protein 1267628..1268089 Listeria monocytogenes serotype 4b str. CLIP 80459 7701872 YP_002757967.1 CDS Lm4b_01267 NC_012488.1 1268128 1268592 R hypothetical protein complement(1268128..1268592) Listeria monocytogenes serotype 4b str. CLIP 80459 7701873 YP_002757968.1 CDS Lm4b_01268 NC_012488.1 1268781 1269695 D hypothetical protein 1268781..1269695 Listeria monocytogenes serotype 4b str. CLIP 80459 7701874 YP_002757969.1 CDS proA NC_012488.1 1269721 1270968 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(1269721..1270968) Listeria monocytogenes serotype 4b str. CLIP 80459 7701875 YP_002757970.1 CDS proB NC_012488.1 1270952 1271782 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(1270952..1271782) Listeria monocytogenes serotype 4b str. CLIP 80459 7704070 YP_002757971.1 CDS Lm4b_01271 NC_012488.1 1271929 1273068 R hypothetical protein complement(1271929..1273068) Listeria monocytogenes serotype 4b str. CLIP 80459 7704071 YP_002757972.1 CDS Lm4b_01272 NC_012488.1 1273148 1273543 R transcriptional regulator (phage-related) complement(1273148..1273543) Listeria monocytogenes serotype 4b str. CLIP 80459 7701876 YP_002757973.1 CDS Lm4b_01273 NC_012488.1 1273694 1273909 D transcriptional regulator 1273694..1273909 Listeria monocytogenes serotype 4b str. CLIP 80459 7701877 YP_002757974.1 CDS Lm4b_01274 NC_012488.1 1274033 1274566 D hypothetical protein 1274033..1274566 Listeria monocytogenes serotype 4b str. CLIP 80459 7701878 YP_002757975.1 CDS Lm4b_01275 NC_012488.1 1274582 1275247 D oligopeptide ABC transporter AppA (binding protein) 1274582..1275247 Listeria monocytogenes serotype 4b str. CLIP 80459 7701879 YP_002757976.1 CDS Lm4b_01276 NC_012488.1 1275509 1276447 D hypothetical protein 1275509..1276447 Listeria monocytogenes serotype 4b str. CLIP 80459 7701880 YP_002757977.1 CDS tig NC_012488.1 1276562 1277845 D Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1276562..1277845 Listeria monocytogenes serotype 4b str. CLIP 80459 7701881 YP_002757978.1 CDS clpX NC_012488.1 1278030 1279289 D binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1278030..1279289 Listeria monocytogenes serotype 4b str. CLIP 80459 7701601 YP_002757979.1 CDS Lm4b_01279 NC_012488.1 1279408 1279974 D type-I signal peptidase 1279408..1279974 Listeria monocytogenes serotype 4b str. CLIP 80459 7703244 YP_002757980.1 CDS Lm4b_01280 NC_012488.1 1280009 1280578 D signal peptidase I 1280009..1280578 Listeria monocytogenes serotype 4b str. CLIP 80459 7701882 YP_002757981.1 CDS Lm4b_01281 NC_012488.1 1280680 1281222 D signal peptidase I 1280680..1281222 Listeria monocytogenes serotype 4b str. CLIP 80459 7701883 YP_002757982.1 CDS rbgA NC_012488.1 1281232 1282095 D essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase 1281232..1282095 Listeria monocytogenes serotype 4b str. CLIP 80459 7701884 YP_002757983.1 CDS rnhB NC_012488.1 1282092 1282877 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1282092..1282877 Listeria monocytogenes serotype 4b str. CLIP 80459 7701885 YP_002757984.1 CDS Lm4b_01284 NC_012488.1 1283011 1283871 D polypeptide deformylase 1283011..1283871 Listeria monocytogenes serotype 4b str. CLIP 80459 7702597 YP_002757985.1 CDS topA NC_012488.1 1284144 1286222 D catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1284144..1286222 Listeria monocytogenes serotype 4b str. CLIP 80459 7701886 YP_002757986.1 CDS gid NC_012488.1 1286285 1287589 D TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 1286285..1287589 Listeria monocytogenes serotype 4b str. CLIP 80459 7701604 YP_002757987.1 CDS codV NC_012488.1 1287872 1288774 D integrase/recombinase 1287872..1288774 Listeria monocytogenes serotype 4b str. CLIP 80459 7702933 YP_002757988.1 CDS clpQ NC_012488.1 1288795 1289334 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1288795..1289334 Listeria monocytogenes serotype 4b str. CLIP 80459 7703248 YP_002757989.1 CDS hslU NC_012488.1 1289348 1290757 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 1289348..1290757 Listeria monocytogenes serotype 4b str. CLIP 80459 7703243 YP_002757990.1 CDS codY NC_012488.1 1290778 1291557 D CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; transcriptional repressor CodY 1290778..1291557 Listeria monocytogenes serotype 4b str. CLIP 80459 7703245 YP_002757991.1 CDS Lm4b_01291 NC_012488.1 1291660 1292079 D 4-hydroxybenzoyl-CoA thioesterase family protein 1291660..1292079 Listeria monocytogenes serotype 4b str. CLIP 80459 7703249 YP_002757992.1 CDS Lm4b_01292 NC_012488.1 1292102 1292413 D hypothetical protein 1292102..1292413 Listeria monocytogenes serotype 4b str. CLIP 80459 7701887 YP_002757993.1 CDS Lm4b_01293 NC_012488.1 1292416 1293288 D aldose epimerase family protein 1292416..1293288 Listeria monocytogenes serotype 4b str. CLIP 80459 7701888 YP_002757994.1 CDS Lm4b_01294 NC_012488.1 1293330 1293926 R hypothetical protein complement(1293330..1293926) Listeria monocytogenes serotype 4b str. CLIP 80459 7701889 YP_002757995.1 CDS Lm4b_01295 NC_012488.1 1294084 1294491 D CoA-binding domain-containing protein 1294084..1294491 Listeria monocytogenes serotype 4b str. CLIP 80459 7701890 YP_002757996.1 CDS parE NC_012488.1 1294672 1296639 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1294672..1296639 Listeria monocytogenes serotype 4b str. CLIP 80459 7701891 YP_002757997.1 CDS parC NC_012488.1 1296636 1299095 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1296636..1299095 Listeria monocytogenes serotype 4b str. CLIP 80459 7704036 YP_002757998.1 CDS Lm4b_01298 NC_012488.1 1299178 1299645 D catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 1299178..1299645 Listeria monocytogenes serotype 4b str. CLIP 80459 7704035 YP_002757999.1 CDS Lm4b_01299 NC_012488.1 1300273 1302093 D internalin like protein (LPXTG motif) 1300273..1302093 Listeria monocytogenes serotype 4b str. CLIP 80459 7701892 YP_002758000.1 CDS Lm4b_01300 NC_012488.1 1302126 1304012 R acyltransferase complement(1302126..1304012) Listeria monocytogenes serotype 4b str. CLIP 80459 7701893 YP_002758001.1 CDS Lm4b_01301 NC_012488.1 1304225 1304923 D glycerophosphodiester phosphodiesterase 1304225..1304923 Listeria monocytogenes serotype 4b str. CLIP 80459 7701894 YP_002758002.1 CDS glpD NC_012488.1 1305156 1306832 D glycerol 3 phosphate dehydrogenase 1305156..1306832 Listeria monocytogenes serotype 4b str. CLIP 80459 7701895 YP_002758003.1 CDS miaA NC_012488.1 1306959 1307876 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1306959..1307876 Listeria monocytogenes serotype 4b str. CLIP 80459 7702938 YP_002758004.1 CDS Lm4b_01304 NC_012488.1 1307998 1308231 D host factor-1 protein 1307998..1308231 Listeria monocytogenes serotype 4b str. CLIP 80459 7702556 YP_002758005.1 CDS Lm4b_01305 NC_012488.1 1308342 1309565 D GTP-binding protein 1308342..1309565 Listeria monocytogenes serotype 4b str. CLIP 80459 7701896 YP_002758006.1 CDS Lm4b_01306 NC_012488.1 1309558 1310784 D aluminum resistance protein 1309558..1310784 Listeria monocytogenes serotype 4b str. CLIP 80459 7701897 YP_002758007.1 CDS glnR NC_012488.1 1310986 1311354 D glutamine synthetase repressor 1310986..1311354 Listeria monocytogenes serotype 4b str. CLIP 80459 7701898 YP_002758008.1 CDS glnA NC_012488.1 1311425 1312759 D glutamine synthetase 1311425..1312759 Listeria monocytogenes serotype 4b str. CLIP 80459 7702937 YP_002758009.1 CDS Lm4b_01309 NC_012488.1 1312903 1314198 D arsenic efflux pump protein 1312903..1314198 Listeria monocytogenes serotype 4b str. CLIP 80459 7702936 YP_002758010.1 CDS Lm4b_01310 NC_012488.1 1314232 1314756 R hypothetical protein complement(1314232..1314756) Listeria monocytogenes serotype 4b str. CLIP 80459 7701899 YP_002758011.1 CDS Lm4b_01311 NC_012488.1 1314787 1315401 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(1314787..1315401) Listeria monocytogenes serotype 4b str. CLIP 80459 7701900 YP_002758012.1 CDS Lm4b_01312 NC_012488.1 1315558 1315887 D cell division suppressor protein YneA 1315558..1315887 Listeria monocytogenes serotype 4b str. CLIP 80459 7701901 YP_002758013.1 CDS Lm4b_01313 NC_012488.1 1315981 1316208 D YnzC protein 1315981..1316208 Listeria monocytogenes serotype 4b str. CLIP 80459 7701902 YP_002758014.1 CDS tkt NC_012488.1 1316355 1318349 D transketolase 1316355..1318349 Listeria monocytogenes serotype 4b str. CLIP 80459 7701903 YP_002758015.1 CDS Lm4b_01315 NC_012488.1 1318570 1318809 D hypothetical protein 1318570..1318809 Listeria monocytogenes serotype 4b str. CLIP 80459 7701602 YP_002758016.1 CDS Lm4b_01316 NC_012488.1 1318858 1319589 R arginine N-methyltransferase complement(1318858..1319589) Listeria monocytogenes serotype 4b str. CLIP 80459 7701904 YP_002758017.1 CDS Lm4b_01317 NC_012488.1 1319611 1320117 R hypothetical protein complement(1319611..1320117) Listeria monocytogenes serotype 4b str. CLIP 80459 7701905 YP_002758018.1 CDS Lm4b_01318 NC_012488.1 1320127 1321431 R hypothetical protein complement(1320127..1321431) Listeria monocytogenes serotype 4b str. CLIP 80459 7701906 YP_002758019.1 CDS Lm4b_01319 NC_012488.1 1321421 1322626 R hypothetical protein complement(1321421..1322626) Listeria monocytogenes serotype 4b str. CLIP 80459 7701907 YP_002758020.1 CDS Lm4b_01320 NC_012488.1 1322604 1322978 R hypothetical protein complement(1322604..1322978) Listeria monocytogenes serotype 4b str. CLIP 80459 7701908 YP_002758021.1 CDS pyrH NC_012488.1 1323271 1323999 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1323271..1323999 Listeria monocytogenes serotype 4b str. CLIP 80459 7701910 YP_002758022.1 CDS frr NC_012488.1 1323999 1324556 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1323999..1324556 Listeria monocytogenes serotype 4b str. CLIP 80459 7701588 YP_002758023.1 CDS Lm4b_01323 NC_012488.1 1324787 1325545 D catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; UDP pyrophosphate synthase 1324787..1325545 Listeria monocytogenes serotype 4b str. CLIP 80459 7702912 YP_002758024.1 CDS cdsA NC_012488.1 1325559 1326347 D phosphatidate cytidylyltransferase (CDP-diglyceride synthase) 1325559..1326347 Listeria monocytogenes serotype 4b str. CLIP 80459 7701911 YP_002758025.1 CDS Lm4b_01325 NC_012488.1 1326362 1327504 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1326362..1327504 Listeria monocytogenes serotype 4b str. CLIP 80459 7703232 YP_002758026.1 CDS Lm4b_01326 NC_012488.1 1327518 1328780 D membrane-associated zinc metalloprotease 1327518..1328780 Listeria monocytogenes serotype 4b str. CLIP 80459 7701912 YP_002758027.1 CDS proS NC_012488.1 1328821 1330527 D catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1328821..1330527 Listeria monocytogenes serotype 4b str. CLIP 80459 7701913 YP_002758028.1 CDS polC NC_012488.1 1330633 1334967 D catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity; DNA polymerase III PolC 1330633..1334967 Listeria monocytogenes serotype 4b str. CLIP 80459 7704072 YP_002758029.1 CDS Lm4b_01329 NC_012488.1 1335149 1335616 D in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 1335149..1335616 Listeria monocytogenes serotype 4b str. CLIP 80459 7704065 YP_002758030.1 CDS nusA NC_012488.1 1335646 1336764 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1335646..1336764 Listeria monocytogenes serotype 4b str. CLIP 80459 7701914 YP_002758031.1 CDS Lm4b_01331 NC_012488.1 1336779 1337063 D hypothetical protein 1336779..1337063 Listeria monocytogenes serotype 4b str. CLIP 80459 7704024 YP_002758032.1 CDS Lm4b_01332 NC_012488.1 1337056 1337355 D hypothetical protein 1337056..1337355 Listeria monocytogenes serotype 4b str. CLIP 80459 7701916 YP_002758033.1 CDS infB NC_012488.1 1337378 1339726 D Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1337378..1339726 Listeria monocytogenes serotype 4b str. CLIP 80459 7701917 YP_002758034.1 CDS Lm4b_01334 NC_012488.1 1339723 1340001 D hypothetical protein 1339723..1340001 Listeria monocytogenes serotype 4b str. CLIP 80459 7702510 YP_002758035.1 CDS rbfA NC_012488.1 1340018 1340362 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1340018..1340362 Listeria monocytogenes serotype 4b str. CLIP 80459 7701918 YP_002758036.1 CDS truB NC_012488.1 1340458 1341372 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1340458..1341372 Listeria monocytogenes serotype 4b str. CLIP 80459 7702584 YP_002758037.1 CDS ribC NC_012488.1 1341442 1342386 D riboflavin kinase and FAD synthase 1341442..1342386 Listeria monocytogenes serotype 4b str. CLIP 80459 7701617 YP_002758038.1 CDS rpsO NC_012488.1 1342523 1342792 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 1342523..1342792 Listeria monocytogenes serotype 4b str. CLIP 80459 7702595 YP_002758039.1 CDS pnpA NC_012488.1 1343040 1345211 D polynucleotide phosphorylase/polyadenylase 1343040..1345211 Listeria monocytogenes serotype 4b str. CLIP 80459 7702448 YP_002758040.1 CDS Lm4b_01340 NC_012488.1 1345250 1346290 R hypothetical protein complement(1345250..1346290) Listeria monocytogenes serotype 4b str. CLIP 80459 7704063 YP_002758041.1 CDS Lm4b_01341 NC_012488.1 1346453 1346932 R YqzC protein complement(1346453..1346932) Listeria monocytogenes serotype 4b str. CLIP 80459 7701919 YP_002758042.1 CDS Lm4b_01342 NC_012488.1 1346960 1347316 R hypothetical protein complement(1346960..1347316) Listeria monocytogenes serotype 4b str. CLIP 80459 7701920 YP_002758043.1 CDS rpmG NC_012488.1 1347514 1347663 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1347514..1347663 Listeria monocytogenes serotype 4b str. CLIP 80459 7701921 YP_002758044.1 CDS Lm4b_01344 NC_012488.1 1347719 1348258 D 5-formyltetrahydrofolate cyclo-ligase 1347719..1348258 Listeria monocytogenes serotype 4b str. CLIP 80459 7702429 YP_002758045.1 CDS Lm4b_01345 NC_012488.1 1348357 1349895 D hypothetical protein 1348357..1349895 Listeria monocytogenes serotype 4b str. CLIP 80459 7701922 YP_002758046.1 CDS Lm4b_01346 NC_012488.1 1349908 1350120 D hypothetical protein 1349908..1350120 Listeria monocytogenes serotype 4b str. CLIP 80459 7701923 YP_002758047.1 CDS Lm4b_01347 NC_012488.1 1350145 1351113 D glucose kinase 1350145..1351113 Listeria monocytogenes serotype 4b str. CLIP 80459 7701924 YP_002758048.1 CDS Lm4b_01348 NC_012488.1 1351253 1352344 D hypothetical protein 1351253..1352344 Listeria monocytogenes serotype 4b str. CLIP 80459 7704214 YP_002758049.1 CDS Lm4b_01349 NC_012488.1 1352362 1352679 R comG operon protein 7 (comGG) complement(1352362..1352679) Listeria monocytogenes serotype 4b str. CLIP 80459 7702637 YP_002758050.1 CDS Lm4b_01350 NC_012488.1 1352676 1353143 R comG operon protein 6 (ComGF) complement(1352676..1353143) Listeria monocytogenes serotype 4b str. CLIP 80459 7704386 YP_002758051.1 CDS Lm4b_01351 NC_012488.1 1353106 1353390 R comG operon protein 5 (comGE) complement(1353106..1353390) Listeria monocytogenes serotype 4b str. CLIP 80459 7704387 YP_002758052.1 CDS Lm4b_01352 NC_012488.1 1353383 1353805 R comG operon protein 4 (comGD) complement(1353383..1353805) Listeria monocytogenes serotype 4b str. CLIP 80459 7704388 YP_002758053.1 CDS Lm4b_01353 NC_012488.1 1353802 1354125 R comG operon protein 3 (ComGC) complement(1353802..1354125) Listeria monocytogenes serotype 4b str. CLIP 80459 7704389 YP_002758054.1 CDS comGB NC_012488.1 1354140 1355171 R comG operon protein 2 (ComGB) complement(1354140..1355171) Listeria monocytogenes serotype 4b str. CLIP 80459 7704390 YP_002758055.1 CDS comGA NC_012488.1 1355149 1356171 R comG operon protein 1 (ComGA) complement(1355149..1356171) Listeria monocytogenes serotype 4b str. CLIP 80459 7703257 YP_002758056.1 CDS gcvT NC_012488.1 1356710 1357798 D catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 1356710..1357798 Listeria monocytogenes serotype 4b str. CLIP 80459 7703258 YP_002758057.1 CDS Lm4b_01357 NC_012488.1 1357814 1359160 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 1357814..1359160 Listeria monocytogenes serotype 4b str. CLIP 80459 7704391 YP_002758058.1 CDS Lm4b_01358 NC_012488.1 1359157 1360623 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 1359157..1360623 Listeria monocytogenes serotype 4b str. CLIP 80459 7704392 YP_002758059.1 CDS Lm4b_01359 NC_012488.1 1360662 1361042 R hypothetical protein complement(1360662..1361042) Listeria monocytogenes serotype 4b str. CLIP 80459 7704393 YP_002758060.1 CDS Lm4b_01360 NC_012488.1 1361104 1361376 R hypothetical protein complement(1361104..1361376) Listeria monocytogenes serotype 4b str. CLIP 80459 7704394 YP_002758061.1 CDS Lm4b_01361 NC_012488.1 1361389 1362354 R hypothetical protein complement(1361389..1362354) Listeria monocytogenes serotype 4b str. CLIP 80459 7704395 YP_002758062.1 CDS Lm4b_01362 NC_012488.1 1362534 1363595 D aminopeptidase P 1362534..1363595 Listeria monocytogenes serotype 4b str. CLIP 80459 7704396 YP_002758063.1 CDS efp NC_012488.1 1363698 1364255 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1363698..1364255 Listeria monocytogenes serotype 4b str. CLIP 80459 7704397 YP_002758064.1 CDS Lm4b_01364 NC_012488.1 1364414 1364893 D acetyl-CoA carboxylase subunit (biotin carboxyl carrier subunit) 1364414..1364893 Listeria monocytogenes serotype 4b str. CLIP 80459 7702892 YP_002758065.1 CDS Lm4b_01365 NC_012488.1 1364907 1366271 D an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 1364907..1366271 Listeria monocytogenes serotype 4b str. CLIP 80459 7704398 YP_002758066.1 CDS Lm4b_01366 NC_012488.1 1366275 1366682 D hypothetical protein 1366275..1366682 Listeria monocytogenes serotype 4b str. CLIP 80459 7704399 YP_002758067.1 CDS nusB NC_012488.1 1366713 1367099 D Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1366713..1367099 Listeria monocytogenes serotype 4b str. CLIP 80459 7704400 YP_002758068.1 CDS folD NC_012488.1 1367196 1368050 D catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1367196..1368050 Listeria monocytogenes serotype 4b str. CLIP 80459 7704401 YP_002758069.1 CDS xseA NC_012488.1 1368069 1369421 D bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1368069..1369421 Listeria monocytogenes serotype 4b str. CLIP 80459 7702909 YP_002758070.1 CDS Lm4b_01370 NC_012488.1 1369411 1369638 D catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 1369411..1369638 Listeria monocytogenes serotype 4b str. CLIP 80459 7704402 YP_002758071.1 CDS Lm4b_01371 NC_012488.1 1369641 1370522 D Trans-Isoprenyl Diphosphate Synthase 1369641..1370522 Listeria monocytogenes serotype 4b str. CLIP 80459 7704403 YP_002758072.1 CDS cspL NC_012488.1 1370715 1370921 D cold shock protein 1370715..1370921 Listeria monocytogenes serotype 4b str. CLIP 80459 7704404 YP_002758073.1 CDS tktB NC_012488.1 1371088 1372917 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1371088..1372917 Listeria monocytogenes serotype 4b str. CLIP 80459 7703261 YP_002758074.1 CDS Lm4b_01375 NC_012488.1 1372914 1373738 D hypothetical protein 1372914..1373738 Listeria monocytogenes serotype 4b str. CLIP 80459 7701603 YP_002758075.1 CDS Lm4b_01376 NC_012488.1 1373929 1374378 D regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor 1373929..1374378 Listeria monocytogenes serotype 4b str. CLIP 80459 7704405 YP_002758076.1 CDS recN NC_012488.1 1374401 1376092 D DNA repair and genetic recombination protein RecN 1374401..1376092 Listeria monocytogenes serotype 4b str. CLIP 80459 7704406 YP_002758077.1 CDS Lm4b_01378 NC_012488.1 1376222 1377088 D phosphotransbutyrylase 1376222..1377088 Listeria monocytogenes serotype 4b str. CLIP 80459 7702587 YP_002758078.1 CDS Lm4b_01379 NC_012488.1 1377225 1378292 D catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase 1377225..1378292 Listeria monocytogenes serotype 4b str. CLIP 80459 7704407 YP_002758079.1 CDS Lm4b_01380 NC_012488.1 1378307 1379734 D E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1378307..1379734 Listeria monocytogenes serotype 4b str. CLIP 80459 7704408 YP_002758080.1 CDS Lm4b_01381 NC_012488.1 1379759 1380754 D branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase alpha subunit) 1379759..1380754 Listeria monocytogenes serotype 4b str. CLIP 80459 7704409 YP_002758081.1 CDS Lm4b_01382 NC_012488.1 1380771 1381754 D branched-chain alpha-keto acid dehydrogenase E1 subunit (2-oxoisovalerate dehydrogenase beta subunit) 1380771..1381754 Listeria monocytogenes serotype 4b str. CLIP 80459 7704410 YP_002758082.1 CDS Lm4b_01383 NC_012488.1 1381785 1383035 D branched-chain alpha-keto acid dehydrogenase E2 subunit (lipoamide acyltransferase) 1381785..1383035 Listeria monocytogenes serotype 4b str. CLIP 80459 7704411 YP_002758083.1 CDS Lm4b_01384 NC_012488.1 1383405 1384502 D aminotripeptidase 1383405..1384502 Listeria monocytogenes serotype 4b str. CLIP 80459 7704412 YP_002758084.1 CDS Lm4b_01385 NC_012488.1 1384647 1386065 D catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1384647..1386065 Listeria monocytogenes serotype 4b str. CLIP 80459 7704413 YP_002758085.1 CDS lisR NC_012488.1 1386256 1386936 D two-component response regulator 1386256..1386936 Listeria monocytogenes serotype 4b str. CLIP 80459 7704414 YP_002758086.1 CDS lisK NC_012488.1 1386933 1388384 D two-component sensor histidine kinase 1386933..1388384 Listeria monocytogenes serotype 4b str. CLIP 80459 7702535 YP_002758087.1 CDS Lm4b_01388 NC_012488.1 1388421 1389248 R involved in biogenesis of membrane proteins; Firmicutes specific proteins are shorter than other bacterial counterparts and have a signal peptide and lipid attachment site; OxaA-like protein precursor complement(1388421..1389248) Listeria monocytogenes serotype 4b str. CLIP 80459 7702534 YP_002758088.1 CDS Lm4b_01389 NC_012488.1 1389285 1389566 R hypothetical protein complement(1389285..1389566) Listeria monocytogenes serotype 4b str. CLIP 80459 7704415 YP_002758089.1 CDS Lm4b_01390 NC_012488.1 1389652 1389933 R catalyzes the hydrolysis of acylphosphate; acylphosphatase complement(1389652..1389933) Listeria monocytogenes serotype 4b str. CLIP 80459 7704416 YP_002758090.1 CDS Lm4b_01391 NC_012488.1 1390073 1390420 D hypothetical protein 1390073..1390420 Listeria monocytogenes serotype 4b str. CLIP 80459 7704417 YP_002758091.1 CDS Lm4b_01392 NC_012488.1 1390449 1391525 D catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase 1390449..1391525 Listeria monocytogenes serotype 4b str. CLIP 80459 7704418 YP_002758092.1 CDS Lm4b_01393 NC_012488.1 1391565 1392524 R hypothetical protein complement(1391565..1392524) Listeria monocytogenes serotype 4b str. CLIP 80459 7704419 YP_002758093.1 CDS Lm4b_01394 NC_012488.1 1392775 1393701 D hypothetical protein 1392775..1393701 Listeria monocytogenes serotype 4b str. CLIP 80459 7704420 YP_002758094.1 CDS Lm4b_01395 NC_012488.1 1393852 1396125 D DNA translocase 1393852..1396125 Listeria monocytogenes serotype 4b str. CLIP 80459 7704421 YP_002758095.1 CDS Lm4b_01396 NC_012488.1 1396159 1396998 R catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase complement(1396159..1396998) Listeria monocytogenes serotype 4b str. CLIP 80459 7704422 YP_002758096.1 CDS tcsA NC_012488.1 1397351 1398424 D CD4+ T cell-stimulating antigen, lipoprotein 1397351..1398424 Listeria monocytogenes serotype 4b str. CLIP 80459 7704423 YP_002758097.1 CDS Lm4b_01398 NC_012488.1 1398856 1400397 D sugar ABC transporter ATP-binding protein 1398856..1400397 Listeria monocytogenes serotype 4b str. CLIP 80459 7701596 YP_002758098.1 CDS Lm4b_01399 NC_012488.1 1400390 1401442 D ABC transporter permease 1400390..1401442 Listeria monocytogenes serotype 4b str. CLIP 80459 7704424 YP_002758099.1 CDS Lm4b_01400 NC_012488.1 1401439 1402389 D sugar ABC transporter permease 1401439..1402389 Listeria monocytogenes serotype 4b str. CLIP 80459 7704425 YP_002758100.1 CDS Lm4b_01401 NC_012488.1 1402506 1403798 D protease 1402506..1403798 Listeria monocytogenes serotype 4b str. CLIP 80459 7704426 YP_002758101.1 CDS Lm4b_01402 NC_012488.1 1403779 1405065 D protease 1403779..1405065 Listeria monocytogenes serotype 4b str. CLIP 80459 7704427 YP_002758102.1 CDS Lm4b_01403 NC_012488.1 1405157 1405888 D 3-ketoacyl-acyl carrier protein reductase 1405157..1405888 Listeria monocytogenes serotype 4b str. CLIP 80459 7704428 YP_002758103.1 CDS Lm4b_01404 NC_012488.1 1405939 1406868 D hypothetical protein 1405939..1406868 Listeria monocytogenes serotype 4b str. CLIP 80459 7704429 YP_002758104.1 CDS Lm4b_01405 NC_012488.1 1406959 1407537 D phosphatidylglycerophosphate synthase 1406959..1407537 Listeria monocytogenes serotype 4b str. CLIP 80459 7704430 YP_002758105.1 CDS Lm4b_01406 NC_012488.1 1407605 1408849 D competence damage-inducible protein A 1407605..1408849 Listeria monocytogenes serotype 4b str. CLIP 80459 7704431 YP_002758106.1 CDS recA NC_012488.1 1409122 1410168 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1409122..1410168 Listeria monocytogenes serotype 4b str. CLIP 80459 7704432 YP_002758107.1 CDS Lm4b_01408 NC_012488.1 1410469 1412031 D protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1410469..1412031 Listeria monocytogenes serotype 4b str. CLIP 80459 7702585 YP_002758108.1 CDS Lm4b_01409 NC_012488.1 1412146 1412643 D N-acetyltransferase 1412146..1412643 Listeria monocytogenes serotype 4b str. CLIP 80459 7704433 YP_002758109.1 CDS Lm4b_01410 NC_012488.1 1412649 1413452 D hypothetical protein 1412649..1413452 Listeria monocytogenes serotype 4b str. CLIP 80459 7704434 YP_002758110.1 CDS Lm4b_01411 NC_012488.1 1413469 1413831 D hypothetical protein 1413469..1413831 Listeria monocytogenes serotype 4b str. CLIP 80459 7704435 YP_002758111.1 CDS mutS NC_012488.1 1413941 1416523 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1413941..1416523 Listeria monocytogenes serotype 4b str. CLIP 80459 7704436 YP_002758112.1 CDS mutL NC_012488.1 1416543 1418354 D This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 1416543..1418354 Listeria monocytogenes serotype 4b str. CLIP 80459 7704017 YP_002758113.1 CDS Lm4b_01414 NC_012488.1 1418371 1418919 D anti-terminator regulatory protein GlpP 1418371..1418919 Listeria monocytogenes serotype 4b str. CLIP 80459 7704015 YP_002758114.1 CDS pflB NC_012488.1 1419345 1421576 D pyruvate formate-lyase 1419345..1421576 Listeria monocytogenes serotype 4b str. CLIP 80459 7704437 YP_002758115.1 CDS pflC NC_012488.1 1421653 1422399 D pyruvate-formate lyase activating enzyme 1421653..1422399 Listeria monocytogenes serotype 4b str. CLIP 80459 7704049 YP_002758116.1 CDS Lm4b_01417 NC_012488.1 1422434 1422964 R hypothetical protein complement(1422434..1422964) Listeria monocytogenes serotype 4b str. CLIP 80459 7704050 YP_002758117.1 CDS Lm4b_01418 NC_012488.1 1423131 1424324 D multidrug-efflux transporter 1423131..1424324 Listeria monocytogenes serotype 4b str. CLIP 80459 7704438 YP_002758118.1 CDS Lm4b_01419 NC_012488.1 1424459 1425007 D hypothetical protein 1424459..1425007 Listeria monocytogenes serotype 4b str. CLIP 80459 7704439 YP_002758119.1 CDS Lm4b_01420 NC_012488.1 1425024 1425251 D hypothetical protein 1425024..1425251 Listeria monocytogenes serotype 4b str. CLIP 80459 7704440 YP_002758120.1 CDS Lm4b_01421 NC_012488.1 1425291 1425824 D Modulates DNA topology 1425291..1425824 Listeria monocytogenes serotype 4b str. CLIP 80459 7704441 YP_002758121.1 CDS Lm4b_01422 NC_012488.1 1426059 1427381 R peptidoglycan bound protein (LPXTG motif) complement(1426059..1427381) Listeria monocytogenes serotype 4b str. CLIP 80459 7704442 YP_002758122.1 CDS Lm4b_01423 NC_012488.1 1427568 1428737 R Acetyl-CoA:acetyltransferase complement(1427568..1428737) Listeria monocytogenes serotype 4b str. CLIP 80459 7704443 YP_002758123.1 CDS Lm4b_01424 NC_012488.1 1428887 1430053 D hydroxy-3-methylglutaryl coenzyme A synthase 1428887..1430053 Listeria monocytogenes serotype 4b str. CLIP 80459 7704444 YP_002758124.1 CDS Lm4b_01425 NC_012488.1 1430076 1430675 R hypothetical protein complement(1430076..1430675) Listeria monocytogenes serotype 4b str. CLIP 80459 7704445 YP_002758125.1 CDS btlA NC_012488.1 1430745 1431989 R BtlA complement(1430745..1431989) Listeria monocytogenes serotype 4b str. CLIP 80459 7704446 YP_002758126.1 CDS Lm4b_01427 NC_012488.1 1432008 1433276 R pyrophosphatase complement(1432008..1433276) Listeria monocytogenes serotype 4b str. CLIP 80459 7703218 YP_002758127.1 CDS Lm4b_01428 NC_012488.1 1433340 1434377 R hypothetical protein complement(1433340..1434377) Listeria monocytogenes serotype 4b str. CLIP 80459 7704447 YP_002758128.1 CDS murB NC_012488.1 1434394 1435290 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(1434394..1435290) Listeria monocytogenes serotype 4b str. CLIP 80459 7704448 YP_002758129.1 CDS Lm4b_01430 NC_012488.1 1435506 1436492 D glycine/betaine/carnitine/choline ABC transporter ATP-binding protein 1435506..1436492 Listeria monocytogenes serotype 4b str. CLIP 80459 7704449 YP_002758130.1 CDS Lm4b_01431 NC_012488.1 1436489 1438003 D glycine betaine/carnitine/choline ABC transporter (membrane protein) 1436489..1438003 Listeria monocytogenes serotype 4b str. CLIP 80459 7704450 YP_002758131.1 CDS Lm4b_01432 NC_012488.1 1438039 1438869 R hypothetical protein complement(1438039..1438869) Listeria monocytogenes serotype 4b str. CLIP 80459 7704451 YP_002758132.1 CDS Lm4b_01433 NC_012488.1 1439008 1440354 R manganese transport protein MntH complement(1439008..1440354) Listeria monocytogenes serotype 4b str. CLIP 80459 7704452 YP_002758133.1 CDS opuCD NC_012488.1 1440467 1441138 R betaine/carnitine/choline ABC transporter (membrane protein) complement(1440467..1441138) Listeria monocytogenes serotype 4b str. CLIP 80459 7704453 YP_002758134.1 CDS opuCC NC_012488.1 1441153 1442079 R glycine betaine/carnitine/choline ABC transporter (osmoprotectant-binding protein) complement(1441153..1442079) Listeria monocytogenes serotype 4b str. CLIP 80459 7704029 YP_002758135.1 CDS opuCB NC_012488.1 1442081 1442737 R glycine betaine/carnitine/choline ABC transporter (membrane protein) complement(1442081..1442737) Listeria monocytogenes serotype 4b str. CLIP 80459 7704028 YP_002758136.1 CDS opuCA NC_012488.1 1442741 1443934 R glycine/betaine/carnitine/choline ABC transporter ATP-binding protein complement(1442741..1443934) Listeria monocytogenes serotype 4b str. CLIP 80459 7704027 YP_002758137.1 CDS Lm4b_01439 NC_012488.1 1444227 1444787 R hypothetical protein complement(1444227..1444787) Listeria monocytogenes serotype 4b str. CLIP 80459 7704026 YP_002758138.1 CDS Lm4b_01440 NC_012488.1 1445035 1445418 R hypothetical protein complement(1445035..1445418) Listeria monocytogenes serotype 4b str. CLIP 80459 7704454 YP_002758139.1 CDS Lm4b_01441 NC_012488.1 1445558 1447159 D ABC transporter ATP-binding protein 1445558..1447159 Listeria monocytogenes serotype 4b str. CLIP 80459 7704455 YP_002758140.1 CDS Lm4b_01442 NC_012488.1 1447198 1447848 R hypothetical protein complement(1447198..1447848) Listeria monocytogenes serotype 4b str. CLIP 80459 7704457 YP_002758141.1 CDS Lm4b_01443 NC_012488.1 1447901 1449241 R glutathione reductase complement(1447901..1449241) Listeria monocytogenes serotype 4b str. CLIP 80459 7704458 YP_002758142.1 CDS Lm4b_01444 NC_012488.1 1449330 1450997 R hypothetical protein complement(1449330..1450997) Listeria monocytogenes serotype 4b str. CLIP 80459 7704459 YP_002758143.1 CDS Lm4b_01445 NC_012488.1 1451017 1451898 R catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase complement(1451017..1451898) Listeria monocytogenes serotype 4b str. CLIP 80459 7704460 YP_002758144.1 CDS Lm4b_01446 NC_012488.1 1451913 1453124 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive; aspartate kinase I complement(1451913..1453124) Listeria monocytogenes serotype 4b str. CLIP 80459 7704461 YP_002758145.1 CDS Lm4b_01447 NC_012488.1 1453136 1454179 R aspartate-semialdehyde dehydrogenase complement(1453136..1454179) Listeria monocytogenes serotype 4b str. CLIP 80459 7704462 YP_002758146.1 CDS Lm4b_01448 NC_012488.1 1454377 1456542 R penicillin-binding protein complement(1454377..1456542) Listeria monocytogenes serotype 4b str. CLIP 80459 7704463 YP_002758147.1 CDS sod NC_012488.1 1456672 1457280 R superoxide dismutase complement(1456672..1457280) Listeria monocytogenes serotype 4b str. CLIP 80459 7704464 YP_002758148.1 CDS Lm4b_01450 NC_012488.1 1457582 1458382 D hypothetical protein 1457582..1458382 Listeria monocytogenes serotype 4b str. CLIP 80459 7701590 YP_002758149.1 CDS ispG NC_012488.1 1458494 1459600 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1458494..1459600 Listeria monocytogenes serotype 4b str. CLIP 80459 7704465 YP_002758150.1 CDS Lm4b_01452 NC_012488.1 1459636 1460343 D transport protein 1459636..1460343 Listeria monocytogenes serotype 4b str. CLIP 80459 7704466 YP_002758151.1 CDS Lm4b_01453 NC_012488.1 1460334 1460660 D hypothetical protein 1460334..1460660 Listeria monocytogenes serotype 4b str. CLIP 80459 7704467 YP_002758152.1 CDS Lm4b_01454 NC_012488.1 1460742 1461626 R protein secretion PrsA (post-translocation molecular chaperone) complement(1460742..1461626) Listeria monocytogenes serotype 4b str. CLIP 80459 7704468 YP_002758153.1 CDS zurR NC_012488.1 1461761 1462186 R transcriptional regulator ZurR (ferric uptake regulation) complement(1461761..1462186) Listeria monocytogenes serotype 4b str. CLIP 80459 7704469 YP_002758154.1 CDS zurM NC_012488.1 1462167 1463045 R metal (zinc) transport protein (ABC transporter, permease protein) complement(1462167..1463045) Listeria monocytogenes serotype 4b str. CLIP 80459 7701634 YP_002758155.1 CDS zurA NC_012488.1 1463020 1463793 R metal (zinc) transport protein(ABC transporter, ATP-binding protein) complement(1463020..1463793) Listeria monocytogenes serotype 4b str. CLIP 80459 7701632 YP_002758156.1 CDS Lm4b_01458 NC_012488.1 1463938 1464864 R catalyzes the hydrolysis of pyrophosphate to phosphate; putative manganese-dependent inorganic pyrophosphatase complement(1463938..1464864) Listeria monocytogenes serotype 4b str. CLIP 80459 7701633 YP_002758157.1 CDS Lm4b_01459 NC_012488.1 1464881 1465774 R Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV complement(1464881..1465774) Listeria monocytogenes serotype 4b str. CLIP 80459 7704215 YP_002758158.1 CDS Lm4b_01460 NC_012488.1 1465790 1467097 R ATP-dependent RNA helicase, DEAD-box family (deaD) complement(1465790..1467097) Listeria monocytogenes serotype 4b str. CLIP 80459 7704216 YP_002758159.1 CDS ispH NC_012488.1 1467244 1468239 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1467244..1468239 Listeria monocytogenes serotype 4b str. CLIP 80459 7704217 YP_002758160.1 CDS Lm4b_01462 NC_012488.1 1468285 1469406 R hypothetical protein complement(1468285..1469406) Listeria monocytogenes serotype 4b str. CLIP 80459 7702242 YP_002758161.1 CDS Lm4b_01463 NC_012488.1 1469403 1470107 R hypothetical protein complement(1469403..1470107) Listeria monocytogenes serotype 4b str. CLIP 80459 7702324 YP_002758162.1 CDS rpoD NC_012488.1 1470175 1471299 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium; RNA polymerase sigma factor RpoD complement(1470175..1471299) Listeria monocytogenes serotype 4b str. CLIP 80459 7702325 YP_002758163.1 CDS dnaG NC_012488.1 1471394 1473274 R DNA primase complement(1471394..1473274) Listeria monocytogenes serotype 4b str. CLIP 80459 7702434 YP_002758164.1 CDS Lm4b_01466 NC_012488.1 1473294 1473734 R hypothetical protein complement(1473294..1473734) Listeria monocytogenes serotype 4b str. CLIP 80459 7702884 YP_002758165.1 CDS Lm4b_01467 NC_012488.1 1473922 1474746 R hypothetical protein complement(1473922..1474746) Listeria monocytogenes serotype 4b str. CLIP 80459 7702326 YP_002758166.1 CDS glyS NC_012488.1 1474781 1476847 R glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta complement(1474781..1476847) Listeria monocytogenes serotype 4b str. CLIP 80459 7702327 YP_002758167.1 CDS glyQ NC_012488.1 1476840 1477730 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(1476840..1477730) Listeria monocytogenes serotype 4b str. CLIP 80459 7702946 YP_002758168.1 CDS recO NC_012488.1 1478012 1478779 R involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO complement(1478012..1478779) Listeria monocytogenes serotype 4b str. CLIP 80459 7702945 YP_002758169.1 CDS Lm4b_01471 NC_012488.1 1478915 1479544 D hypothetical protein 1478915..1479544 Listeria monocytogenes serotype 4b str. CLIP 80459 7702328 YP_002758170.1 CDS era NC_012488.1 1479591 1480496 R Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era complement(1479591..1480496) Listeria monocytogenes serotype 4b str. CLIP 80459 7702329 YP_002758171.1 CDS Lm4b_01473 NC_012488.1 1480493 1480888 R cytidine deaminase complement(1480493..1480888) Listeria monocytogenes serotype 4b str. CLIP 80459 7702330 YP_002758172.1 CDS Lm4b_01474 NC_012488.1 1480913 1481308 R diacylglycerol kinase complement(1480913..1481308) Listeria monocytogenes serotype 4b str. CLIP 80459 7702331 YP_002758173.1 CDS Lm4b_01475 NC_012488.1 1481286 1481771 R putative metalloprotease complement(1481286..1481771) Listeria monocytogenes serotype 4b str. CLIP 80459 7702332 YP_002758174.1 CDS Lm4b_01476 NC_012488.1 1481788 1483944 R hypothetical protein complement(1481788..1483944) Listeria monocytogenes serotype 4b str. CLIP 80459 7702333 YP_002758175.1 CDS Lm4b_01477 NC_012488.1 1483960 1484919 R phosphate starvation induced protein PhoH complement(1483960..1484919) Listeria monocytogenes serotype 4b str. CLIP 80459 7702334 YP_002758176.1 CDS Lm4b_01478 NC_012488.1 1485107 1485562 R hypothetical protein complement(1485107..1485562) Listeria monocytogenes serotype 4b str. CLIP 80459 7702335 YP_002758177.1 CDS rpsU NC_012488.1 1485573 1485746 R a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 complement(1485573..1485746) Listeria monocytogenes serotype 4b str. CLIP 80459 7702336 YP_002758178.1 CDS Lm4b_01480 NC_012488.1 1485944 1486711 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(1485944..1486711) Listeria monocytogenes serotype 4b str. CLIP 80459 7702454 YP_002758179.1 CDS prmA NC_012488.1 1486712 1487656 R methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase complement(1486712..1487656) Listeria monocytogenes serotype 4b str. CLIP 80459 7702337 YP_002758180.1 CDS dnaJ NC_012488.1 1487728 1488858 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(1487728..1488858) Listeria monocytogenes serotype 4b str. CLIP 80459 7702338 YP_002758181.1 CDS dnaK NC_012488.1 1489000 1490841 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(1489000..1490841) Listeria monocytogenes serotype 4b str. CLIP 80459 7702886 YP_002758182.1 CDS grpE NC_012488.1 1490875 1491450 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(1490875..1491450) Listeria monocytogenes serotype 4b str. CLIP 80459 7702887 YP_002758183.1 CDS hrcA NC_012488.1 1491492 1492529 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(1491492..1492529) Listeria monocytogenes serotype 4b str. CLIP 80459 7702950 YP_002758184.1 CDS hemN NC_012488.1 1492676 1493833 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(1492676..1493833) Listeria monocytogenes serotype 4b str. CLIP 80459 7702500 YP_002758185.1 CDS Lm4b_01487 NC_012488.1 1493922 1494950 R oxidoreductase complement(1493922..1494950) Listeria monocytogenes serotype 4b str. CLIP 80459 7702962 YP_002758186.1 CDS Lm4b_01488 NC_012488.1 1495063 1495500 D transcriptional regulator (MerR family) 1495063..1495500 Listeria monocytogenes serotype 4b str. CLIP 80459 7702339 YP_002758187.1 CDS lepA NC_012488.1 1495546 1497372 R binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA complement(1495546..1497372) Listeria monocytogenes serotype 4b str. CLIP 80459 7702526 YP_002758188.1 CDS rpsT NC_012488.1 1497617 1497871 D binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1497617..1497871 Listeria monocytogenes serotype 4b str. CLIP 80459 7702527 YP_002758189.1 CDS holA NC_012488.1 1497957 1498988 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(1497957..1498988) Listeria monocytogenes serotype 4b str. CLIP 80459 7702453 YP_002758190.1 CDS comEC NC_012488.1 1499056 1501278 R integral membrane protein ComEC complement(1499056..1501278) Listeria monocytogenes serotype 4b str. CLIP 80459 7702341 YP_002758191.1 CDS comEB NC_012488.1 1501313 1501873 R ComEB protein complement(1501313..1501873) Listeria monocytogenes serotype 4b str. CLIP 80459 7703253 YP_002758192.1 CDS comEA NC_012488.1 1501945 1502547 R integral membrane protein ComEA complement(1501945..1502547) Listeria monocytogenes serotype 4b str. CLIP 80459 7703252 YP_002758193.1 CDS Lm4b_01495 NC_012488.1 1502650 1503381 R hypothetical protein complement(1502650..1503381) Listeria monocytogenes serotype 4b str. CLIP 80459 7703251 YP_002758194.1 CDS Lm4b_01496 NC_012488.1 1503437 1503793 R hypothetical protein complement(1503437..1503793) Listeria monocytogenes serotype 4b str. CLIP 80459 7702342 YP_002758195.1 CDS Lm4b_01497 NC_012488.1 1503798 1504373 R hypothetical protein complement(1503798..1504373) Listeria monocytogenes serotype 4b str. CLIP 80459 7702343 YP_002758196.1 CDS nadD NC_012488.1 1504360 1504926 R transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase complement(1504360..1504926) Listeria monocytogenes serotype 4b str. CLIP 80459 7702344 YP_002758197.1 CDS Lm4b_01499 NC_012488.1 1504944 1505234 R hypothetical protein complement(1504944..1505234) Listeria monocytogenes serotype 4b str. CLIP 80459 7702345 YP_002758198.1 CDS Lm4b_01500 NC_012488.1 1505234 1506055 R shikimate 5-dehydrogenase (AroD) complement(1505234..1506055) Listeria monocytogenes serotype 4b str. CLIP 80459 7702346 YP_002758199.1 CDS Lm4b_01501b NC_012488.1 1506075 1507175 R in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; GTP-binding protein YqeH complement(1506075..1507175) Listeria monocytogenes serotype 4b str. CLIP 80459 7702347 YP_002758200.1 CDS Lm4b_01502 NC_012488.1 1507172 1507693 R hypothetical protein complement(1507172..1507693) Listeria monocytogenes serotype 4b str. CLIP 80459 7702348 YP_002758201.1 CDS Lm4b_01503 NC_012488.1 1507855 1509663 D oligopeptidase 1507855..1509663 Listeria monocytogenes serotype 4b str. CLIP 80459 7702349 YP_002758202.1 CDS Lm4b_01504 NC_012488.1 1509699 1510400 R 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(1509699..1510400) Listeria monocytogenes serotype 4b str. CLIP 80459 7702351 YP_002758203.1 CDS Lm4b_01505 NC_012488.1 1510450 1511073 R hypothetical protein complement(1510450..1511073) Listeria monocytogenes serotype 4b str. CLIP 80459 7702352 YP_002758204.1 CDS greA NC_012488.1 1511124 1511606 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(1511124..1511606) Listeria monocytogenes serotype 4b str. CLIP 80459 7702353 YP_002758205.1 CDS udk NC_012488.1 1511800 1512429 R functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase complement(1511800..1512429) Listeria monocytogenes serotype 4b str. CLIP 80459 7702354 YP_002758206.1 CDS Lm4b_01508 NC_012488.1 1512426 1513079 R O-methyltransferase complement(1512426..1513079) Listeria monocytogenes serotype 4b str. CLIP 80459 7701624 YP_002758207.1 CDS Lm4b_01509 NC_012488.1 1513155 1514225 R hypothetical protein complement(1513155..1514225) Listeria monocytogenes serotype 4b str. CLIP 80459 7702355 YP_002758208.1 CDS Lm4b_01510 NC_012488.1 1514428 1515054 D hypothetical protein 1514428..1515054 Listeria monocytogenes serotype 4b str. CLIP 80459 7702356 YP_002758209.1 CDS Lm4b_01511 NC_012488.1 1515100 1515402 R hypothetical protein complement(1515100..1515402) Listeria monocytogenes serotype 4b str. CLIP 80459 7702357 YP_002758210.1 CDS Lm4b_01512 NC_012488.1 1515418 1515834 R similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein complement(1515418..1515834) Listeria monocytogenes serotype 4b str. CLIP 80459 7702358 YP_002758211.1 CDS Lm4b_01513 NC_012488.1 1515831 1516103 R hypothetical protein complement(1515831..1516103) Listeria monocytogenes serotype 4b str. CLIP 80459 7702359 YP_002758212.1 CDS alaS NC_012488.1 1516195 1518834 R Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase complement(1516195..1518834) Listeria monocytogenes serotype 4b str. CLIP 80459 7702360 YP_002758213.1 CDS Lm4b_01515 NC_012488.1 1519141 1519836 R ABC transporter ATP-binding protein complement(1519141..1519836) Listeria monocytogenes serotype 4b str. CLIP 80459 7704363 YP_002758214.1 CDS Lm4b_01516 NC_012488.1 1519845 1521344 R transporter complement(1519845..1521344) Listeria monocytogenes serotype 4b str. CLIP 80459 7702361 YP_002758215.1 CDS Lm4b_01517 NC_012488.1 1521511 1522197 D two-component response regulator 1521511..1522197 Listeria monocytogenes serotype 4b str. CLIP 80459 7702362 YP_002758216.1 CDS Lm4b_01518 NC_012488.1 1522194 1523633 D two-component sensor histidine kinase 1522194..1523633 Listeria monocytogenes serotype 4b str. CLIP 80459 7702363 YP_002758217.1 CDS Lm4b_01519 NC_012488.1 1523675 1526071 R exodeoxyribonuclease V complement(1523675..1526071) Listeria monocytogenes serotype 4b str. CLIP 80459 7702364 YP_002758218.1 CDS Lm4b_01520 NC_012488.1 1526099 1526767 R hypothetical protein complement(1526099..1526767) Listeria monocytogenes serotype 4b str. CLIP 80459 7702365 YP_002758219.1 CDS Lm4b_01521 NC_012488.1 1526778 1527518 R hypothetical protein complement(1526778..1527518) Listeria monocytogenes serotype 4b str. CLIP 80459 7702366 YP_002758220.1 CDS mnmA NC_012488.1 1527637 1528752 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(1527637..1528752) Listeria monocytogenes serotype 4b str. CLIP 80459 7702367 YP_002758221.1 CDS Lm4b_01523 NC_012488.1 1528771 1529919 R iron-sulfur cofactor synthesis protein complement(1528771..1529919) Listeria monocytogenes serotype 4b str. CLIP 80459 7702368 YP_002758222.1 CDS Lm4b_01524 NC_012488.1 1530300 1531583 R recombination factor protein RarA complement(1530300..1531583) Listeria monocytogenes serotype 4b str. CLIP 80459 7702369 YP_002758223.1 CDS Lm4b_01525 NC_012488.1 1531732 1532154 D hypothetical protein 1531732..1532154 Listeria monocytogenes serotype 4b str. CLIP 80459 7702370 YP_002758224.1 CDS Lm4b_01526 NC_012488.1 1532399 1533604 D ammonium transporter NrgA 1532399..1533604 Listeria monocytogenes serotype 4b str. CLIP 80459 7702371 YP_002758225.1 CDS Lm4b_01527 NC_012488.1 1533618 1533983 D nitrogen regulatory PII protein 1533618..1533983 Listeria monocytogenes serotype 4b str. CLIP 80459 7702372 YP_002758226.1 CDS Lm4b_01528 NC_012488.1 1534133 1534513 D hypothetical protein 1534133..1534513 Listeria monocytogenes serotype 4b str. CLIP 80459 7702373 YP_002758227.1 CDS aspS NC_012488.1 1534553 1536328 R catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase complement(1534553..1536328) Listeria monocytogenes serotype 4b str. CLIP 80459 7702374 YP_002758228.1 CDS hisS NC_012488.1 1536330 1537607 R catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase complement(1536330..1537607) Listeria monocytogenes serotype 4b str. CLIP 80459 7703206 YP_002758229.1 CDS Lm4b_01531b NC_012488.1 1538058 1539341 D N-acetylmuramoyl-L-alanine amidase 1538058..1539341 Listeria monocytogenes serotype 4b str. CLIP 80459 7702496 YP_002758230.1 CDS Lm4b_01532 NC_012488.1 1539378 1539830 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(1539378..1539830) Listeria monocytogenes serotype 4b str. CLIP 80459 7702375 YP_002758231.1 CDS relA NC_012488.1 1539846 1542062 R (p)ppGpp synthetase complement(1539846..1542062) Listeria monocytogenes serotype 4b str. CLIP 80459 7702376 YP_002758232.1 CDS apt NC_012488.1 1542268 1542789 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(1542268..1542789) Listeria monocytogenes serotype 4b str. CLIP 80459 7702591 YP_002758233.1 CDS Lm4b_01535 NC_012488.1 1542779 1545130 R single-stranded-DNA-specific exonuclease (RecJ) complement(1542779..1545130) Listeria monocytogenes serotype 4b str. CLIP 80459 7704368 YP_002758234.1 CDS Lm4b_01536 NC_012488.1 1545235 1545579 R hypothetical protein complement(1545235..1545579) Listeria monocytogenes serotype 4b str. CLIP 80459 7702378 YP_002758235.1 CDS Lm4b_01537 NC_012488.1 1545677 1547941 R part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF complement(1545677..1547941) Listeria monocytogenes serotype 4b str. CLIP 80459 7702379 YP_002758236.1 CDS Lm4b_01538 NC_012488.1 1548042 1548332 R hypothetical protein complement(1548042..1548332) Listeria monocytogenes serotype 4b str. CLIP 80459 7702380 YP_002758237.1 CDS Lm4b_01539 NC_012488.1 1548475 1548804 R hypothetical protein complement(1548475..1548804) Listeria monocytogenes serotype 4b str. CLIP 80459 7702381 YP_002758238.1 CDS tgt NC_012488.1 1548838 1549977 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(1548838..1549977) Listeria monocytogenes serotype 4b str. CLIP 80459 7702382 YP_002758239.1 CDS queA NC_012488.1 1550064 1551092 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase complement(1550064..1551092) Listeria monocytogenes serotype 4b str. CLIP 80459 7702383 YP_002758240.1 CDS ruvB NC_012488.1 1551096 1552103 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(1551096..1552103) Listeria monocytogenes serotype 4b str. CLIP 80459 7702384 YP_002758241.1 CDS ruvA NC_012488.1 1552119 1552724 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(1552119..1552724) Listeria monocytogenes serotype 4b str. CLIP 80459 7702483 YP_002758242.1 CDS Lm4b_01544 NC_012488.1 1552848 1553783 R L-lactate dehydrogenase complement(1552848..1553783) Listeria monocytogenes serotype 4b str. CLIP 80459 7702482 YP_002758243.1 CDS Lm4b_01545 NC_012488.1 1553853 1554578 R hypothetical protein complement(1553853..1554578) Listeria monocytogenes serotype 4b str. CLIP 80459 7702385 YP_002758244.1 CDS Lm4b_01546 NC_012488.1 1554689 1555537 R catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase complement(1554689..1555537) Listeria monocytogenes serotype 4b str. CLIP 80459 7702386 YP_002758245.1 CDS obgE NC_012488.1 1555604 1556893 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(1555604..1556893) Listeria monocytogenes serotype 4b str. CLIP 80459 7702387 YP_002758246.1 CDS glpK NC_012488.1 1557052 1558545 R Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase complement(1557052..1558545) Listeria monocytogenes serotype 4b str. CLIP 80459 7702388 YP_002758247.1 CDS Lm4b_01549 NC_012488.1 1558620 1559438 R glycerol uptake facilitator complement(1558620..1559438) Listeria monocytogenes serotype 4b str. CLIP 80459 7702389 YP_002758248.1 CDS rpmA NC_012488.1 1559804 1560094 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(1559804..1560094) Listeria monocytogenes serotype 4b str. CLIP 80459 7702390 YP_002758249.1 CDS Lm4b_01552 NC_012488.1 1560108 1560425 R hypothetical protein complement(1560108..1560425) Listeria monocytogenes serotype 4b str. CLIP 80459 7702422 YP_002758250.1 CDS rplU NC_012488.1 1560444 1560752 R 50S ribosomal protein L21 complement(1560444..1560752) Listeria monocytogenes serotype 4b str. CLIP 80459 7702391 YP_002758251.1 CDS Lm4b_01554 NC_012488.1 1560909 1562270 R hypothetical ribonuclease G complement(1560909..1562270) Listeria monocytogenes serotype 4b str. CLIP 80459 7702418 YP_002758252.1 CDS minD NC_012488.1 1562323 1563123 R cell division inhibitor (septum placement) protein MinD complement(1562323..1563123) Listeria monocytogenes serotype 4b str. CLIP 80459 7702392 YP_002758253.1 CDS minC NC_012488.1 1563126 1563803 R blocks the formation of polar Z-ring septums; septum formation inhibitor complement(1563126..1563803) Listeria monocytogenes serotype 4b str. CLIP 80459 7702558 YP_002758254.1 CDS mreD NC_012488.1 1563981 1564499 R cell-shape determining protein MreD complement(1563981..1564499) Listeria monocytogenes serotype 4b str. CLIP 80459 7702557 YP_002758255.1 CDS mreC NC_012488.1 1564502 1565389 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(1564502..1565389) Listeria monocytogenes serotype 4b str. CLIP 80459 7702565 YP_002758256.1 CDS mreB NC_012488.1 1565475 1566488 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(1565475..1566488) Listeria monocytogenes serotype 4b str. CLIP 80459 7702564 YP_002758257.1 CDS radC NC_012488.1 1566940 1567614 R Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC complement(1566940..1567614) Listeria monocytogenes serotype 4b str. CLIP 80459 7702563 YP_002758258.1 CDS comC NC_012488.1 1567626 1568336 R late competence protein ComC (type IV prepilin peptidase) complement(1567626..1568336) Listeria monocytogenes serotype 4b str. CLIP 80459 7702393 YP_002758259.1 CDS folC NC_012488.1 1568548 1569837 R Folyl-polyglutamate synthetase complement(1568548..1569837) Listeria monocytogenes serotype 4b str. CLIP 80459 7703250 YP_002758260.1 CDS valS NC_012488.1 1569899 1572550 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(1569899..1572550) Listeria monocytogenes serotype 4b str. CLIP 80459 7702908 YP_002758261.1 CDS hemL NC_012488.1 1572874 1574163 R Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase complement(1572874..1574163) Listeria monocytogenes serotype 4b str. CLIP 80459 7701630 YP_002758262.1 CDS hemB NC_012488.1 1574176 1575150 R catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase complement(1574176..1575150) Listeria monocytogenes serotype 4b str. CLIP 80459 7702961 YP_002758263.1 CDS hemD NC_012488.1 1575147 1575869 R catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase complement(1575147..1575869) Listeria monocytogenes serotype 4b str. CLIP 80459 7702958 YP_002758264.1 CDS hemC NC_012488.1 1575866 1576795 R transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(1575866..1576795) Listeria monocytogenes serotype 4b str. CLIP 80459 7702394 YP_002758265.1 CDS hemA NC_012488.1 1576799 1578106 R catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase complement(1576799..1578106) Listeria monocytogenes serotype 4b str. CLIP 80459 7702959 YP_002758266.1 CDS engB NC_012488.1 1578234 1578818 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(1578234..1578818) Listeria monocytogenes serotype 4b str. CLIP 80459 7702957 YP_002758267.1 CDS thrS NC_012488.1 1578926 1580848 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(1578926..1580848) Listeria monocytogenes serotype 4b str. CLIP 80459 7702395 YP_002758268.1 CDS dnaI NC_012488.1 1581198 1582121 R Primosomal protein that may act to load helicase DnaC during DNA replication; primosomal protein DnaI complement(1581198..1582121) Listeria monocytogenes serotype 4b str. CLIP 80459 7701600 YP_002758269.1 CDS dnaB NC_012488.1 1582131 1583507 R chromosome replication initiation / membrane attachment protein DnaB complement(1582131..1583507) Listeria monocytogenes serotype 4b str. CLIP 80459 7702885 YP_002758270.1 CDS nrdR NC_012488.1 1583513 1583977 R transcriptional regulator NrdR complement(1583513..1583977) Listeria monocytogenes serotype 4b str. CLIP 80459 7703285 YP_002758271.1 CDS coaE NC_012488.1 1584055 1584657 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase complement(1584055..1584657) Listeria monocytogenes serotype 4b str. CLIP 80459 7702396 YP_002758272.1 CDS mutM NC_012488.1 1584674 1585495 R Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase complement(1584674..1585495) Listeria monocytogenes serotype 4b str. CLIP 80459 7702397 YP_002758273.1 CDS polA NC_012488.1 1585519 1588146 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(1585519..1588146) Listeria monocytogenes serotype 4b str. CLIP 80459 7704016 YP_002758274.1 CDS citC NC_012488.1 1588311 1589573 R Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(1588311..1589573) Listeria monocytogenes serotype 4b str. CLIP 80459 7704064 YP_002758275.1 CDS citZ NC_012488.1 1589593 1590714 R catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; citrate synthase complement(1589593..1590714) Listeria monocytogenes serotype 4b str. CLIP 80459 7703236 YP_002758276.1 CDS Lm4b_01579 NC_012488.1 1590751 1591212 R hypothetical protein complement(1590751..1591212) Listeria monocytogenes serotype 4b str. CLIP 80459 7703238 YP_002758277.1 CDS fxsA NC_012488.1 1591369 1591746 R F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; FxsA complement(1591369..1591746) Listeria monocytogenes serotype 4b str. CLIP 80459 7702398 YP_002758278.1 CDS pykA NC_012488.1 1591865 1593622 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase complement(1591865..1593622) Listeria monocytogenes serotype 4b str. CLIP 80459 7702399 YP_002758279.1 CDS pfk NC_012488.1 1593905 1594864 R catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase complement(1593905..1594864) Listeria monocytogenes serotype 4b str. CLIP 80459 7704091 YP_002758280.1 CDS accA NC_012488.1 1595148 1596104 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(1595148..1596104) Listeria monocytogenes serotype 4b str. CLIP 80459 7704047 YP_002758281.1 CDS accD NC_012488.1 1596094 1596978 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta complement(1596094..1596978) Listeria monocytogenes serotype 4b str. CLIP 80459 7704354 YP_002758282.1 CDS dnaE NC_012488.1 1597196 1600522 R DNA polymerase III (alpha subunit) DnaE complement(1597196..1600522) Listeria monocytogenes serotype 4b str. CLIP 80459 7704355 YP_002758283.1 CDS Lm4b_01586 NC_012488.1 1600644 1601579 R hypothetical protein complement(1600644..1601579) Listeria monocytogenes serotype 4b str. CLIP 80459 7702883 YP_002758284.1 CDS Lm4b_01587 NC_012488.1 1601600 1602913 R hypothetical protein complement(1601600..1602913) Listeria monocytogenes serotype 4b str. CLIP 80459 7702400 YP_002758285.1 CDS Lm4b_01588 NC_012488.1 1602939 1603625 R catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins; metal-dependent hydrolase complement(1602939..1603625) Listeria monocytogenes serotype 4b str. CLIP 80459 7702401 YP_002758286.1 CDS Lm4b_01589 NC_012488.1 1603790 1604887 D X-Pro dipeptidase 1603790..1604887 Listeria monocytogenes serotype 4b str. CLIP 80459 7702402 YP_002758287.1 CDS Lm4b_01590 NC_012488.1 1604930 1606042 R alanine dehydrogenase complement(1604930..1606042) Listeria monocytogenes serotype 4b str. CLIP 80459 7702718 YP_002758288.1 CDS Lm4b_01591 NC_012488.1 1606281 1606745 D hypothetical protein 1606281..1606745 Listeria monocytogenes serotype 4b str. CLIP 80459 7702638 YP_002758289.1 CDS ackA NC_012488.1 1606797 1607990 R AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase complement(1606797..1607990) Listeria monocytogenes serotype 4b str. CLIP 80459 7702639 YP_002758290.1 CDS Lm4b_01593 NC_012488.1 1608014 1609012 R site specific DNA-methyltransferase complement(1608014..1609012) Listeria monocytogenes serotype 4b str. CLIP 80459 7704356 YP_002758291.1 CDS tpx NC_012488.1 1609203 1609700 R antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase complement(1609203..1609700) Listeria monocytogenes serotype 4b str. CLIP 80459 7702640 YP_002758292.1 CDS Lm4b_01595 NC_012488.1 1609761 1610297 R hypothetical protein complement(1609761..1610297) Listeria monocytogenes serotype 4b str. CLIP 80459 7702641 YP_002758293.1 CDS Lm4b_01596 NC_012488.1 1610317 1611330 R protease complement(1610317..1611330) Listeria monocytogenes serotype 4b str. CLIP 80459 7702642 YP_002758294.1 CDS ppnK NC_012488.1 1611509 1612312 D catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1611509..1612312 Listeria monocytogenes serotype 4b str. CLIP 80459 7702643 YP_002758295.1 CDS argF NC_012488.1 1612344 1613294 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase complement(1612344..1613294) Listeria monocytogenes serotype 4b str. CLIP 80459 7702644 YP_002758296.1 CDS argD NC_012488.1 1613291 1614451 R acetylornithine aminotransferase complement(1613291..1614451) Listeria monocytogenes serotype 4b str. CLIP 80459 7704372 YP_002758297.1 CDS argB NC_012488.1 1614448 1615200 R catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase complement(1614448..1615200) Listeria monocytogenes serotype 4b str. CLIP 80459 7704371 YP_002758298.1 CDS argJ NC_012488.1 1615213 1616409 R bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein complement(1615213..1616409) Listeria monocytogenes serotype 4b str. CLIP 80459 7704369 YP_002758299.1 CDS argC NC_012488.1 1616425 1617456 R catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase complement(1616425..1617456) Listeria monocytogenes serotype 4b str. CLIP 80459 7704375 YP_002758300.1 CDS Lm4b_01603 NC_012488.1 1617627 1618838 R Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI complement(1617627..1618838) Listeria monocytogenes serotype 4b str. CLIP 80459 7704370 YP_002758301.1 CDS Lm4b_01604 NC_012488.1 1618840 1619979 R iron-sulfur cofactor synthesis protein nifS complement(1618840..1619979) Listeria monocytogenes serotype 4b str. CLIP 80459 7702645 YP_002758302.1 CDS Lm4b_01605 NC_012488.1 1620107 1621822 R acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation; septation ring formation regulator EzrA complement(1620107..1621822) Listeria monocytogenes serotype 4b str. CLIP 80459 7702646 YP_002758303.1 CDS Lm4b_01606 NC_012488.1 1622115 1622603 D hypothetical protein 1622115..1622603 Listeria monocytogenes serotype 4b str. CLIP 80459 7702647 YP_002758304.1 CDS rpsD NC_012488.1 1622815 1623417 D primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1622815..1623417 Listeria monocytogenes serotype 4b str. CLIP 80459 7702648 YP_002758305.1 CDS Lm4b_01608 NC_012488.1 1623920 1624792 R hypothetical protein complement(1623920..1624792) Listeria monocytogenes serotype 4b str. CLIP 80459 7702437 YP_002758306.1 CDS tyrS NC_012488.1 1624990 1626249 R tyrosyl-tRNA synthetase complement(1624990..1626249) Listeria monocytogenes serotype 4b str. CLIP 80459 7702649 YP_002758307.1 CDS ccpA NC_012488.1 1626571 1627578 R catabolite control protein A complement(1626571..1627578) Listeria monocytogenes serotype 4b str. CLIP 80459 7701623 YP_002758308.1 CDS aroA NC_012488.1 1627813 1628898 R catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase complement(1627813..1628898) Listeria monocytogenes serotype 4b str. CLIP 80459 7703231 YP_002758309.1 CDS Lm4b_01612 NC_012488.1 1629118 1629642 R general stress protein complement(1629118..1629642) Listeria monocytogenes serotype 4b str. CLIP 80459 7704377 YP_002758310.1 CDS Lm4b_01613 NC_012488.1 1629664 1630119 R hypothetical protein complement(1629664..1630119) Listeria monocytogenes serotype 4b str. CLIP 80459 7702650 YP_002758311.1 CDS Lm4b_01614b NC_012488.1 1630375 1631487 D hypothetical protein 1630375..1631487 Listeria monocytogenes serotype 4b str. CLIP 80459 7702651 YP_002758312.1 CDS Lm4b_01615 NC_012488.1 1631528 1632073 R 2-cys peroxiredoxin complement(1631528..1632073) Listeria monocytogenes serotype 4b str. CLIP 80459 7702652 YP_002758313.1 CDS murC NC_012488.1 1632218 1633561 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(1632218..1633561) Listeria monocytogenes serotype 4b str. CLIP 80459 7702653 YP_002758314.1 CDS Lm4b_01617 NC_012488.1 1633856 1636207 R cell division protein (DNA translocase) dnaK complement(1633856..1636207) Listeria monocytogenes serotype 4b str. CLIP 80459 7702567 YP_002758315.1 CDS pheT NC_012488.1 1636517 1637134 R phenylalanyl-tRNA synthetase (beta subunit) complement(1636517..1637134) Listeria monocytogenes serotype 4b str. CLIP 80459 7702655 YP_002758316.1 CDS Lm4b_01619 NC_012488.1 1637140 1637940 R hypothetical protein complement(1637140..1637940) Listeria monocytogenes serotype 4b str. CLIP 80459 7704056 YP_002758317.1 CDS Lm4b_01620 NC_012488.1 1637975 1638286 R thioredoxin complement(1637975..1638286) Listeria monocytogenes serotype 4b str. CLIP 80459 7702656 YP_002758318.1 CDS Lm4b_01621 NC_012488.1 1638401 1638619 R hypothetical protein complement(1638401..1638619) Listeria monocytogenes serotype 4b str. CLIP 80459 7702657 YP_002758319.1 CDS Lm4b_01622 NC_012488.1 1638612 1639685 R aminopeptidase complement(1638612..1639685) Listeria monocytogenes serotype 4b str. CLIP 80459 7702658 YP_002758320.1 CDS Lm4b_01623 NC_012488.1 1639883 1640194 D hypothetical protein 1639883..1640194 Listeria monocytogenes serotype 4b str. CLIP 80459 7702659 YP_002758321.1 CDS Lm4b_01624 NC_012488.1 1640231 1640479 R hypothetical protein complement(1640231..1640479) Listeria monocytogenes serotype 4b str. CLIP 80459 7702660 YP_002758322.1 CDS Lm4b_01625 NC_012488.1 1640614 1641465 R hypothetical protein complement(1640614..1641465) Listeria monocytogenes serotype 4b str. CLIP 80459 7702661 YP_002758323.1 CDS trmB NC_012488.1 1641526 1642170 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(1641526..1642170) Listeria monocytogenes serotype 4b str. CLIP 80459 7702662 YP_002758324.1 CDS Lm4b_01627 NC_012488.1 1642177 1642959 R hypothetical protein complement(1642177..1642959) Listeria monocytogenes serotype 4b str. CLIP 80459 7702663 YP_002758325.1 CDS Lm4b_01628 NC_012488.1 1643171 1644640 R multidrug-efflux transporter complement(1643171..1644640) Listeria monocytogenes serotype 4b str. CLIP 80459 7702664 YP_002758326.1 CDS Lm4b_01629 NC_012488.1 1644637 1645077 R transcription regulator MarR family complement(1644637..1645077) Listeria monocytogenes serotype 4b str. CLIP 80459 7702665 YP_002758327.1 CDS daaA NC_012488.1 1645299 1646168 R D-Amino Acid Aminotransferase complement(1645299..1646168) Listeria monocytogenes serotype 4b str. CLIP 80459 7702666 YP_002758328.1 CDS Lm4b_01631 NC_012488.1 1646281 1647693 R divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases; dipeptidase PepV complement(1646281..1647693) Listeria monocytogenes serotype 4b str. CLIP 80459 7703272 YP_002758329.1 CDS Lm4b_01632 NC_012488.1 1647768 1648181 R MutT protein (dGTP pyrophosphohydrolase) complement(1647768..1648181) Listeria monocytogenes serotype 4b str. CLIP 80459 7702668 YP_002758330.1 CDS Lm4b_01633 NC_012488.1 1648286 1649116 D hypothetical protein 1648286..1649116 Listeria monocytogenes serotype 4b str. CLIP 80459 7702669 YP_002758331.1 CDS Lm4b_01634 NC_012488.1 1649154 1649807 R hypothetical protein complement(1649154..1649807) Listeria monocytogenes serotype 4b str. CLIP 80459 7702670 YP_002758332.1 CDS Lm4b_01635 NC_012488.1 1649817 1651430 R transporter complement(1649817..1651430) Listeria monocytogenes serotype 4b str. CLIP 80459 7702671 YP_002758333.1 CDS Lm4b_01636 NC_012488.1 1651541 1653154 R transporter complement(1651541..1653154) Listeria monocytogenes serotype 4b str. CLIP 80459 7702672 YP_002758334.1 CDS Lm4b_01637 NC_012488.1 1653239 1653676 R hypothetical protein complement(1653239..1653676) Listeria monocytogenes serotype 4b str. CLIP 80459 7702673 YP_002758335.1 CDS trpA NC_012488.1 1653747 1654520 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(1653747..1654520) Listeria monocytogenes serotype 4b str. CLIP 80459 7702674 YP_002758336.1 CDS trpB NC_012488.1 1654513 1655715 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(1654513..1655715) Listeria monocytogenes serotype 4b str. CLIP 80459 7701608 YP_002758337.1 CDS trpF NC_012488.1 1655718 1656326 R catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase complement(1655718..1656326) Listeria monocytogenes serotype 4b str. CLIP 80459 7701609 YP_002758338.1 CDS trpC NC_012488.1 1656323 1657081 R involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase complement(1656323..1657081) Listeria monocytogenes serotype 4b str. CLIP 80459 7701613 YP_002758339.1 CDS trpD NC_012488.1 1657078 1658097 R Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase complement(1657078..1658097) Listeria monocytogenes serotype 4b str. CLIP 80459 7701610 YP_002758340.1 CDS trpG NC_012488.1 1658069 1658674 R TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II complement(1658069..1658674) Listeria monocytogenes serotype 4b str. CLIP 80459 7701611 YP_002758341.1 CDS trpE NC_012488.1 1658671 1660035 R with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I complement(1658671..1660035) Listeria monocytogenes serotype 4b str. CLIP 80459 7701614 YP_002758342.1 CDS Lm4b_01645 NC_012488.1 1661122 1663722 D bifunctional acetaldehyde-CoA/alcohol dehydrogenase 1661122..1663722 Listeria monocytogenes serotype 4b str. CLIP 80459 7701612 YP_002758343.1 CDS Lm4b_01646 NC_012488.1 1663845 1664273 D hypothetical protein 1663845..1664273 Listeria monocytogenes serotype 4b str. CLIP 80459 7702675 YP_002758344.1 CDS Lm4b_01647 NC_012488.1 1664357 1665277 D ABC transporter ATP-binding protein 1664357..1665277 Listeria monocytogenes serotype 4b str. CLIP 80459 7702676 YP_002758345.1 CDS Lm4b_01648 NC_012488.1 1665274 1666341 D membrane protein 1665274..1666341 Listeria monocytogenes serotype 4b str. CLIP 80459 7702677 YP_002758346.1 CDS Lm4b_01649 NC_012488.1 1666378 1667352 R hypothetical protein complement(1666378..1667352) Listeria monocytogenes serotype 4b str. CLIP 80459 7702678 YP_002758347.1 CDS Lm4b_01650 NC_012488.1 1667349 1667930 R dna-3-methyladenine glycosidase complement(1667349..1667930) Listeria monocytogenes serotype 4b str. CLIP 80459 7702679 YP_002758348.1 CDS Lm4b_01651 NC_012488.1 1667943 1668176 R hypothetical protein complement(1667943..1668176) Listeria monocytogenes serotype 4b str. CLIP 80459 7702680 YP_002758349.1 CDS citB NC_012488.1 1668276 1670978 R Catalyzes the conversion of citrate to isocitrate; aconitate hydratase complement(1668276..1670978) Listeria monocytogenes serotype 4b str. CLIP 80459 7702681 YP_002758350.1 CDS Lm4b_01653 NC_012488.1 1671133 1671936 R sigma factor regulator complement(1671133..1671936) Listeria monocytogenes serotype 4b str. CLIP 80459 7703235 YP_002758351.1 CDS Lm4b_01654 NC_012488.1 1671960 1672382 R hypothetical protein complement(1671960..1672382) Listeria monocytogenes serotype 4b str. CLIP 80459 7702682 YP_002758352.1 CDS Lm4b_01655 NC_012488.1 1672382 1675600 R SNF2-type helicase complement(1672382..1675600) Listeria monocytogenes serotype 4b str. CLIP 80459 7702683 YP_002758353.1 CDS Lm4b_01656 NC_012488.1 1675684 1678755 R ATP-dependent dsDNA exonuclease SbcC complement(1675684..1678755) Listeria monocytogenes serotype 4b str. CLIP 80459 7702684 YP_002758354.1 CDS Lm4b_01657 NC_012488.1 1678752 1679876 R exonucleases SbcD complement(1678752..1679876) Listeria monocytogenes serotype 4b str. CLIP 80459 7702685 YP_002758355.1 CDS Lm4b_01658 NC_012488.1 1679992 1680600 D 1-acylglycerol-3-phosphate O-acyltransferases 1679992..1680600 Listeria monocytogenes serotype 4b str. CLIP 80459 7702686 YP_002758356.1 CDS Lm4b_01659 NC_012488.1 1680642 1681157 R hypothetical protein complement(1680642..1681157) Listeria monocytogenes serotype 4b str. CLIP 80459 7702687 YP_002758357.1 CDS Lm4b_01660 NC_012488.1 1681331 1681819 R hypothetical protein complement(1681331..1681819) Listeria monocytogenes serotype 4b str. CLIP 80459 7702688 YP_002758358.1 CDS Lm4b_01661 NC_012488.1 1681900 1683705 R ABC transporter ATP-binding protein complement(1681900..1683705) Listeria monocytogenes serotype 4b str. CLIP 80459 7702689 YP_002758359.1 CDS Lm4b_01662 NC_012488.1 1683689 1685458 R ABC transporter ATP-binding protein complement(1683689..1685458) Listeria monocytogenes serotype 4b str. CLIP 80459 7702690 YP_002758360.1 CDS Lm4b_01663 NC_012488.1 1685862 1686482 R cell surface protein complement(1685862..1686482) Listeria monocytogenes serotype 4b str. CLIP 80459 7702691 YP_002758361.1 CDS Lm4b_01664 NC_012488.1 1686498 1686992 R cell surface protein complement(1686498..1686992) Listeria monocytogenes serotype 4b str. CLIP 80459 7702692 YP_002758362.1 CDS Lm4b_01665 NC_012488.1 1687786 1688349 R hypothetical protein complement(1687786..1688349) Listeria monocytogenes serotype 4b str. CLIP 80459 7702693 YP_002758363.1 CDS Lm4b_01666 NC_012488.1 1688367 1688798 R hypothetical protein complement(1688367..1688798) Listeria monocytogenes serotype 4b str. CLIP 80459 7702694 YP_002758364.1 CDS tsf NC_012488.1 1689356 1690240 R EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts complement(1689356..1690240) Listeria monocytogenes serotype 4b str. CLIP 80459 7702695 YP_002758365.1 CDS rpsB NC_012488.1 1690320 1691069 R one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 complement(1690320..1691069) Listeria monocytogenes serotype 4b str. CLIP 80459 7701620 YP_002758366.1 CDS Lm4b_01669 NC_012488.1 1691374 1691658 R Antigen C complement(1691374..1691658) Listeria monocytogenes serotype 4b str. CLIP 80459 7702435 YP_002758367.1 CDS Lm4b_01670 NC_012488.1 1691811 1693259 R sucrose-specific PTS system IIBC component complement(1691811..1693259) Listeria monocytogenes serotype 4b str. CLIP 80459 7702696 YP_002758368.1 CDS murQ NC_012488.1 1693272 1694162 R catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid-6-phosphate etherase complement(1693272..1694162) Listeria monocytogenes serotype 4b str. CLIP 80459 7702697 YP_002758369.1 CDS Lm4b_01672 NC_012488.1 1694303 1695154 R hypothetical protein complement(1694303..1695154) Listeria monocytogenes serotype 4b str. CLIP 80459 7702698 YP_002758370.1 CDS leuS NC_012488.1 1695242 1697653 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(1695242..1697653) Listeria monocytogenes serotype 4b str. CLIP 80459 7702699 YP_002758371.1 CDS Lm4b_01674 NC_012488.1 1698057 1699022 D hypothetical protein 1698057..1699022 Listeria monocytogenes serotype 4b str. CLIP 80459 7702532 YP_002758372.1 CDS Lm4b_01675 NC_012488.1 1699019 1699597 D hypothetical protein 1699019..1699597 Listeria monocytogenes serotype 4b str. CLIP 80459 7702700 YP_002758373.1 CDS ansB NC_012488.1 1699619 1701484 R asparagine synthetase complement(1699619..1701484) Listeria monocytogenes serotype 4b str. CLIP 80459 7702701 YP_002758374.1 CDS metK NC_012488.1 1701621 1702820 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(1701621..1702820) Listeria monocytogenes serotype 4b str. CLIP 80459 7704366 YP_002758375.1 CDS Lm4b_01678 NC_012488.1 1703242 1703544 D hypothetical protein 1703242..1703544 Listeria monocytogenes serotype 4b str. CLIP 80459 7702553 YP_002758376.1 CDS Lm4b_01679 NC_012488.1 1703577 1708733 R Peptidoglycan linked protein (atypical IPALG motif) complement(1703577..1708733) Listeria monocytogenes serotype 4b str. CLIP 80459 7702702 YP_002758377.1 CDS Lm4b_01680 NC_012488.1 1708828 1709739 R L-2-hydroxyisocaproate dehydrogenase complement(1708828..1709739) Listeria monocytogenes serotype 4b str. CLIP 80459 7702703 YP_002758378.1 CDS Lm4b_01681 NC_012488.1 1709756 1709998 R hypothetical protein complement(1709756..1709998) Listeria monocytogenes serotype 4b str. CLIP 80459 7702704 YP_002758379.1 CDS Lm4b_01682 NC_012488.1 1710049 1710522 R Nudix hydrolase complement(1710049..1710522) Listeria monocytogenes serotype 4b str. CLIP 80459 7702705 YP_002758380.1 CDS Lm4b_01683 NC_012488.1 1710596 1710862 D hypothetical protein 1710596..1710862 Listeria monocytogenes serotype 4b str. CLIP 80459 7702706 YP_002758381.1 CDS Lm4b_01684 NC_012488.1 1711012 1711965 D ABC transporter/adhesion protein 1711012..1711965 Listeria monocytogenes serotype 4b str. CLIP 80459 7702707 YP_002758382.1 CDS menE NC_012488.1 1711983 1713392 R converts O-succinylbenzoate to O-succinylbenzoyl-CoA; O-succinylbenzoic acid--CoA ligase complement(1711983..1713392) Listeria monocytogenes serotype 4b str. CLIP 80459 7702708 YP_002758383.1 CDS menB NC_012488.1 1713408 1714226 R catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase complement(1713408..1714226) Listeria monocytogenes serotype 4b str. CLIP 80459 7702547 YP_002758384.1 CDS Lm4b_01687 NC_012488.1 1714223 1715050 R prolyl aminopetidase complement(1714223..1715050) Listeria monocytogenes serotype 4b str. CLIP 80459 7702548 YP_002758385.1 CDS menD NC_012488.1 1715052 1716794 R SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase complement(1715052..1716794) Listeria monocytogenes serotype 4b str. CLIP 80459 7702709 YP_002758386.1 CDS menF NC_012488.1 1716791 1718179 R menaquinone-specific isochorismate synthase complement(1716791..1718179) Listeria monocytogenes serotype 4b str. CLIP 80459 7702549 YP_002758387.1 CDS Lm4b_01690 NC_012488.1 1718354 1719292 D catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1718354..1719292 Listeria monocytogenes serotype 4b str. CLIP 80459 7702551 YP_002758388.1 CDS Lm4b_01691 NC_012488.1 1719326 1721179 R catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein complement(1719326..1721179) Listeria monocytogenes serotype 4b str. CLIP 80459 7702710 YP_002758389.1 CDS Lm4b_01692 NC_012488.1 1721176 1722348 R catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase complement(1721176..1722348) Listeria monocytogenes serotype 4b str. CLIP 80459 7702711 YP_002758390.1 CDS Lm4b_01693 NC_012488.1 1722341 1723465 R cystathionine gamma-synthase complement(1722341..1723465) Listeria monocytogenes serotype 4b str. CLIP 80459 7702712 YP_002758391.1 CDS Lm4b_01694 NC_012488.1 1723487 1725784 R catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase complement(1723487..1725784) Listeria monocytogenes serotype 4b str. CLIP 80459 7702713 YP_002758392.1 CDS Lm4b_01695 NC_012488.1 1726074 1727249 R transmembrane transport protein complement(1726074..1727249) Listeria monocytogenes serotype 4b str. CLIP 80459 7702714 YP_002758393.1 CDS Lm4b_01697 NC_012488.1 1734672 1735118 R transcription regulator (Fur family) complement(1734672..1735118) Listeria monocytogenes serotype 4b str. CLIP 80459 7702457 YP_002758394.1 CDS Lm4b_01698 NC_012488.1 1735201 1736142 R glycerate dehydrogenase complement(1735201..1736142) Listeria monocytogenes serotype 4b str. CLIP 80459 7704218 YP_002758395.1 CDS gsaB NC_012488.1 1736287 1737585 D converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate; glutamate-1-semialdehyde aminotransferase 1736287..1737585 Listeria monocytogenes serotype 4b str. CLIP 80459 7703365 YP_002758396.1 CDS Lm4b_01700 NC_012488.1 1737691 1738779 D hypothetical protein 1737691..1738779 Listeria monocytogenes serotype 4b str. CLIP 80459 7702951 YP_002758397.1 CDS Lm4b_01701 NC_012488.1 1738821 1739348 R hypothetical protein complement(1738821..1739348) Listeria monocytogenes serotype 4b str. CLIP 80459 7701636 YP_002758398.1 CDS Lm4b_01702b NC_012488.1 1739503 1740249 R Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase complement(1739503..1740249) Listeria monocytogenes serotype 4b str. CLIP 80459 7701637 YP_002758399.1 CDS Lm4b_01703 NC_012488.1 1740253 1741350 R A/G-specific adenine glycosylase complement(1740253..1741350) Listeria monocytogenes serotype 4b str. CLIP 80459 7701638 YP_002758400.1 CDS Lm4b_01704 NC_012488.1 1741550 1742530 D hypothetical protein 1741550..1742530 Listeria monocytogenes serotype 4b str. CLIP 80459 7701639 YP_002758401.1 CDS Lm4b_01705 NC_012488.1 1742559 1743020 R deoxyuridine triphosphate nucleotidohydrolase complement(1742559..1743020) Listeria monocytogenes serotype 4b str. CLIP 80459 7701641 YP_002758402.1 CDS Lm4b_01706 NC_012488.1 1743032 1743265 R hypothetical protein complement(1743032..1743265) Listeria monocytogenes serotype 4b str. CLIP 80459 7701642 YP_002758403.1 CDS recX NC_012488.1 1743267 1744076 R binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX complement(1743267..1744076) Listeria monocytogenes serotype 4b str. CLIP 80459 7701643 YP_002758404.1 CDS Lm4b_01708 NC_012488.1 1744174 1745076 D CDP-abequose synthase 1744174..1745076 Listeria monocytogenes serotype 4b str. CLIP 80459 7701644 YP_002758405.1 CDS Lm4b_01709 NC_012488.1 1745097 1747694 R membrane protein complement(1745097..1747694) Listeria monocytogenes serotype 4b str. CLIP 80459 7701645 YP_002758406.1 CDS Lm4b_01710 NC_012488.1 1747721 1748395 R hypothetical protein complement(1747721..1748395) Listeria monocytogenes serotype 4b str. CLIP 80459 7701646 YP_002758407.1 CDS Lm4b_01711 NC_012488.1 1748603 1749568 D hypothetical protein 1748603..1749568 Listeria monocytogenes serotype 4b str. CLIP 80459 7701647 YP_002758408.1 CDS Lm4b_01712 NC_012488.1 1749613 1750155 R ribosomal-protein-alanine N-acetyltransferase complement(1749613..1750155) Listeria monocytogenes serotype 4b str. CLIP 80459 7701648 YP_002758409.1 CDS Lm4b_01713 NC_012488.1 1750345 1751247 D hypothetical protein 1750345..1751247 Listeria monocytogenes serotype 4b str. CLIP 80459 7701649 YP_002758410.1 CDS Lm4b_01714 NC_012488.1 1751275 1751481 D hypothetical protein 1751275..1751481 Listeria monocytogenes serotype 4b str. CLIP 80459 7701650 YP_002758411.1 CDS Lm4b_01715 NC_012488.1 1751521 1751874 R hypothetical protein complement(1751521..1751874) Listeria monocytogenes serotype 4b str. CLIP 80459 7701651 YP_002758412.1 CDS Lm4b_01716 NC_012488.1 1751903 1752304 R glutathione transferase-fosfomycin resistance protein complement(1751903..1752304) Listeria monocytogenes serotype 4b str. CLIP 80459 7701652 YP_002758413.1 CDS Lm4b_01717 NC_012488.1 1752319 1753698 R RNA methyltransferase complement(1752319..1753698) Listeria monocytogenes serotype 4b str. CLIP 80459 7701653 YP_002758414.1 CDS Lm4b_01718 NC_012488.1 1753763 1754143 R hypothetical protein complement(1753763..1754143) Listeria monocytogenes serotype 4b str. CLIP 80459 7701654 YP_002758415.1 CDS Lm4b_01719 NC_012488.1 1754250 1754894 D deoxyguanosine kinase/deoxyadenosine kinase(I) subunit 1754250..1754894 Listeria monocytogenes serotype 4b str. CLIP 80459 7701655 YP_002758416.1 CDS Lm4b_01720 NC_012488.1 1754924 1755793 R transport protein complement(1754924..1755793) Listeria monocytogenes serotype 4b str. CLIP 80459 7701656 YP_002758417.1 CDS Lm4b_01721 NC_012488.1 1755883 1756104 D hypothetical protein 1755883..1756104 Listeria monocytogenes serotype 4b str. CLIP 80459 7701657 YP_002758418.1 CDS Lm4b_01722 NC_012488.1 1756124 1756930 R aminoglycoside N3'-acetyltransferase complement(1756124..1756930) Listeria monocytogenes serotype 4b str. CLIP 80459 7701658 YP_002758419.1 CDS Lm4b_01723 NC_012488.1 1757056 1757814 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase complement(1757056..1757814) Listeria monocytogenes serotype 4b str. CLIP 80459 7701659 YP_002758420.1 CDS Lm4b_01724 NC_012488.1 1758002 1758448 D flavodoxin 1758002..1758448 Listeria monocytogenes serotype 4b str. CLIP 80459 7701660 YP_002758421.1 CDS Lm4b_01725 NC_012488.1 1758586 1759818 D aminopeptidase 1758586..1759818 Listeria monocytogenes serotype 4b str. CLIP 80459 7701661 YP_002758422.1 CDS Lm4b_01726 NC_012488.1 1759922 1761181 D multidrug resistance protein, integral membrane protein 1759922..1761181 Listeria monocytogenes serotype 4b str. CLIP 80459 7701662 YP_002758423.1 CDS Lm4b_01727 NC_012488.1 1761399 1762391 D rod shape-determining protein MreB 1761399..1762391 Listeria monocytogenes serotype 4b str. CLIP 80459 7701663 YP_002758424.1 CDS Lm4b_01728 NC_012488.1 1762665 1763237 R hypothetical protein complement(1762665..1763237) Listeria monocytogenes serotype 4b str. CLIP 80459 7704325 YP_002758425.1 CDS Lm4b_01729 NC_012488.1 1763328 1763996 R hypothetical protein complement(1763328..1763996) Listeria monocytogenes serotype 4b str. CLIP 80459 7701665 YP_002758426.1 CDS Lm4b_01730 NC_012488.1 1764181 1764756 D transcription regulator 1764181..1764756 Listeria monocytogenes serotype 4b str. CLIP 80459 7701666 YP_002758427.1 CDS Lm4b_01731 NC_012488.1 1764835 1765902 R hypothetical protein complement(1764835..1765902) Listeria monocytogenes serotype 4b str. CLIP 80459 7701667 YP_002758428.1 CDS Lm4b_01732 NC_012488.1 1766136 1767224 R surface protein complement(1766136..1767224) Listeria monocytogenes serotype 4b str. CLIP 80459 7701668 YP_002758429.1 CDS Lm4b_01733 NC_012488.1 1767246 1767548 R phosphotransferase system (PTS) lichenan-specific enzyme IIA component complement(1767246..1767548) Listeria monocytogenes serotype 4b str. CLIP 80459 7701669 YP_002758430.1 CDS Lm4b_01734 NC_012488.1 1767618 1767926 R phosphotransferase system (PTS) lichenan-specific enzyme IIB component complement(1767618..1767926) Listeria monocytogenes serotype 4b str. CLIP 80459 7701670 YP_002758431.1 CDS Lm4b_01735 NC_012488.1 1768086 1770764 R transcriptional regulator (NifA/NtrC family) complement(1768086..1770764) Listeria monocytogenes serotype 4b str. CLIP 80459 7701671 YP_002758432.1 CDS Lm4b_01736 NC_012488.1 1770898 1772226 R ATP-dependent RNA helicase complement(1770898..1772226) Listeria monocytogenes serotype 4b str. CLIP 80459 7701672 YP_002758433.1 CDS Lm4b_01737 NC_012488.1 1772269 1773042 R hypothetical protein complement(1772269..1773042) Listeria monocytogenes serotype 4b str. CLIP 80459 7701673 YP_002758434.1 CDS Lm4b_01738 NC_012488.1 1773035 1773715 R ABC transporter ATP-binding protein complement(1773035..1773715) Listeria monocytogenes serotype 4b str. CLIP 80459 7701674 YP_002758435.1 CDS Lm4b_01739 NC_012488.1 1773708 1774076 R GntR family transcriptional regulator complement(1773708..1774076) Listeria monocytogenes serotype 4b str. CLIP 80459 7701675 YP_002758436.1 CDS Lm4b_01740 NC_012488.1 1774197 1775180 R hypothetical protein complement(1774197..1775180) Listeria monocytogenes serotype 4b str. CLIP 80459 7701676 YP_002758437.1 CDS Lm4b_01741 NC_012488.1 1775240 1776205 R transcription regulator (LacI family) complement(1775240..1776205) Listeria monocytogenes serotype 4b str. CLIP 80459 7701677 YP_002758438.1 CDS Lm4b_01742 NC_012488.1 1776253 1779513 R cellobiose-phosphorylase complement(1776253..1779513) Listeria monocytogenes serotype 4b str. CLIP 80459 7701678 YP_002758439.1 CDS Lm4b_01743 NC_012488.1 1779510 1781681 R beta-glucosidase complement(1779510..1781681) Listeria monocytogenes serotype 4b str. CLIP 80459 7701679 YP_002758440.1 CDS Lm4b_01744 NC_012488.1 1782110 1783354 D sugar ABC transporter binding protein 1782110..1783354 Listeria monocytogenes serotype 4b str. CLIP 80459 7701680 YP_002758441.1 CDS Lm4b_01745 NC_012488.1 1783415 1784308 D sugar ABC transporter permease 1783415..1784308 Listeria monocytogenes serotype 4b str. CLIP 80459 7701681 YP_002758442.1 CDS Lm4b_01746 NC_012488.1 1784326 1785156 D sugar ABC transporter permease 1784326..1785156 Listeria monocytogenes serotype 4b str. CLIP 80459 7701682 YP_002758443.1 CDS gltD NC_012488.1 1785201 1786670 R glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta complement(1785201..1786670) Listeria monocytogenes serotype 4b str. CLIP 80459 7701683 YP_002758444.1 CDS Lm4b_01748 NC_012488.1 1786685 1791277 R glutamate synthase (large subunit) complement(1786685..1791277) Listeria monocytogenes serotype 4b str. CLIP 80459 7701684 YP_002758445.1 CDS gltC NC_012488.1 1791470 1792357 D HTH-type transcriptional regulator gltC 1791470..1792357 Listeria monocytogenes serotype 4b str. CLIP 80459 7701685 YP_002758446.1 CDS Lm4b_01750 NC_012488.1 1792354 1792872 R hypothetical protein complement(1792354..1792872) Listeria monocytogenes serotype 4b str. CLIP 80459 7701686 YP_002758447.1 CDS Lm4b_01751 NC_012488.1 1792875 1793981 R glycerol dehydrogenase complement(1792875..1793981) Listeria monocytogenes serotype 4b str. CLIP 80459 7701687 YP_002758448.1 CDS Lm4b_01752 NC_012488.1 1794073 1794888 R amino acid ABC transporter substrate-binding protein complement(1794073..1794888) Listeria monocytogenes serotype 4b str. CLIP 80459 7701688 YP_002758449.1 CDS Lm4b_01753 NC_012488.1 1794890 1795537 R amino acid (glutamine) ABC transporter (ATP-binding protein) complement(1794890..1795537) Listeria monocytogenes serotype 4b str. CLIP 80459 7701689 YP_002758450.1 CDS Lm4b_01754 NC_012488.1 1795548 1796189 R amino acid (glutamine) ABC transporter, permease protein complement(1795548..1796189) Listeria monocytogenes serotype 4b str. CLIP 80459 7701690 YP_002758451.1 CDS Lm4b_01755 NC_012488.1 1796587 1797627 R two-component sensor histidine kinase complement(1796587..1797627) Listeria monocytogenes serotype 4b str. CLIP 80459 7701691 YP_002758452.1 CDS adeC NC_012488.1 1797649 1799391 R adenine deaminase complement(1797649..1799391) Listeria monocytogenes serotype 4b str. CLIP 80459 7701692 YP_002758453.1 CDS Lm4b_01757 NC_012488.1 1799408 1799866 R hypothetical protein complement(1799408..1799866) Listeria monocytogenes serotype 4b str. CLIP 80459 7704361 YP_002758454.1 CDS Lm4b_01758 NC_012488.1 1799887 1800762 R hypothetical protein complement(1799887..1800762) Listeria monocytogenes serotype 4b str. CLIP 80459 7701693 YP_002758455.1 CDS Lm4b_01759 NC_012488.1 1800832 1801509 R two-component response regulator complement(1800832..1801509) Listeria monocytogenes serotype 4b str. CLIP 80459 7701694 YP_002758456.1 CDS Lm4b_01760 NC_012488.1 1801572 1803551 R ABC transporter permease complement(1801572..1803551) Listeria monocytogenes serotype 4b str. CLIP 80459 7701695 YP_002758457.1 CDS Lm4b_01761 NC_012488.1 1803541 1804308 R ABC transporter ATP-binding protein complement(1803541..1804308) Listeria monocytogenes serotype 4b str. CLIP 80459 7701696 YP_002758458.1 CDS Lm4b_01762 NC_012488.1 1804437 1804946 R hypothetical protein complement(1804437..1804946) Listeria monocytogenes serotype 4b str. CLIP 80459 7701697 YP_002758459.1 CDS Lm4b_01763 NC_012488.1 1805170 1805643 D shikimate kinase 1805170..1805643 Listeria monocytogenes serotype 4b str. CLIP 80459 7701699 YP_002758460.1 CDS Lm4b_01764 NC_012488.1 1805674 1806228 R hypothetical protein complement(1805674..1806228) Listeria monocytogenes serotype 4b str. CLIP 80459 7701700 YP_002758461.1 CDS Lm4b_01765 NC_012488.1 1806563 1807924 R hypothetical RNA methyltransferase complement(1806563..1807924) Listeria monocytogenes serotype 4b str. CLIP 80459 7701701 YP_002758462.1 CDS Lm4b_01766 NC_012488.1 1807948 1808703 R hypothetical protein complement(1807948..1808703) Listeria monocytogenes serotype 4b str. CLIP 80459 7701702 YP_002758463.1 CDS Lm4b_01767 NC_012488.1 1808851 1809783 R similar to YegS from E. coli; putative lipid kinase complement(1808851..1809783) Listeria monocytogenes serotype 4b str. CLIP 80459 7701703 YP_002758464.1 CDS gatB NC_012488.1 1809929 1811359 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B complement(1809929..1811359) Listeria monocytogenes serotype 4b str. CLIP 80459 7701704 YP_002758465.1 CDS gatA NC_012488.1 1811371 1812822 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(1811371..1812822) Listeria monocytogenes serotype 4b str. CLIP 80459 7702927 YP_002758466.1 CDS gatC NC_012488.1 1812846 1813139 R allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C complement(1812846..1813139) Listeria monocytogenes serotype 4b str. CLIP 80459 7702926 YP_002758467.1 CDS Lm4b_01771 NC_012488.1 1813264 1814379 R hypothetical protein complement(1813264..1814379) Listeria monocytogenes serotype 4b str. CLIP 80459 7702928 YP_002758468.1 CDS ligA NC_012488.1 1814376 1816391 R this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA complement(1814376..1816391) Listeria monocytogenes serotype 4b str. CLIP 80459 7701705 YP_002758469.1 CDS pcrA NC_012488.1 1816417 1818612 R ATP-dependent DNA helicase complement(1816417..1818612) Listeria monocytogenes serotype 4b str. CLIP 80459 7701706 YP_002758470.1 CDS Lm4b_01774 NC_012488.1 1818677 1819354 R PcrB-like protein; GGGP synthase; member of prenyltransferases that transfer isoprenoid groups to nonisoprenoid acceptors; functions in form GGGP from glycerol-1-phosphate (G-1-P) and geranylgeranyl pyrophosphate (GGPP); important in lipid metabolism and especially important as the ether linkages in archaea are different than those in bacteria; GGGP synthase lies at the branch point for membrane lipid biosynthesis; cytosolic; T acidophilum protein acts as a homodimer while M thermoautotrophicum protein has been reported to function as a pentamer; geranylgeranylglyceryl phosphate synthase-like protein complement(1818677..1819354) Listeria monocytogenes serotype 4b str. CLIP 80459 7704039 YP_002758471.1 CDS Lm4b_01775 NC_012488.1 1819561 1820916 D sodium-dependent transporter 1819561..1820916 Listeria monocytogenes serotype 4b str. CLIP 80459 7701707 YP_002758472.1 CDS Lm4b_01776 NC_012488.1 1820959 1821213 R hypothetical protein complement(1820959..1821213) Listeria monocytogenes serotype 4b str. CLIP 80459 7701708 YP_002758473.1 CDS Lm4b_01777 NC_012488.1 1821230 1821526 R hypothetical protein complement(1821230..1821526) Listeria monocytogenes serotype 4b str. CLIP 80459 7701709 YP_002758474.1 CDS purD NC_012488.1 1821665 1822927 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(1821665..1822927) Listeria monocytogenes serotype 4b str. CLIP 80459 7701710 YP_002758475.1 CDS purH NC_012488.1 1822952 1824481 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(1822952..1824481) Listeria monocytogenes serotype 4b str. CLIP 80459 7704081 YP_002758476.1 CDS purN NC_012488.1 1824487 1825053 R phosphoribosylglycinamide formyltransferase complement(1824487..1825053) Listeria monocytogenes serotype 4b str. CLIP 80459 7704084 YP_002758477.1 CDS purM NC_012488.1 1825050 1826099 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(1825050..1826099) Listeria monocytogenes serotype 4b str. CLIP 80459 7704088 YP_002758478.1 CDS purF NC_012488.1 1826118 1827545 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(1826118..1827545) Listeria monocytogenes serotype 4b str. CLIP 80459 7704087 YP_002758479.1 CDS purQ NC_012488.1 1827530 1829749 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II complement(1827530..1829749) Listeria monocytogenes serotype 4b str. CLIP 80459 7704083 YP_002758480.1 CDS purL NC_012488.1 1829742 1830425 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I complement(1829742..1830425) Listeria monocytogenes serotype 4b str. CLIP 80459 7704089 YP_002758481.1 CDS Lm4b_01785 NC_012488.1 1830429 1830674 R With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway; phosphoribosylformylglycinamidine synthase subunit PurS complement(1830429..1830674) Listeria monocytogenes serotype 4b str. CLIP 80459 7704086 YP_002758482.1 CDS purC NC_012488.1 1830686 1831399 R catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(1830686..1831399) Listeria monocytogenes serotype 4b str. CLIP 80459 7701711 YP_002758483.1 CDS purB NC_012488.1 1831480 1832772 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(1831480..1832772) Listeria monocytogenes serotype 4b str. CLIP 80459 7704080 YP_002758484.1 CDS purK NC_012488.1 1832791 1833915 R With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit complement(1832791..1833915) Listeria monocytogenes serotype 4b str. CLIP 80459 7704079 YP_002758485.1 CDS purE NC_012488.1 1833908 1834396 R hosphoribosylaminoimidazole carboxylase I complement(1833908..1834396) Listeria monocytogenes serotype 4b str. CLIP 80459 7704085 YP_002758486.1 CDS Lm4b_01790 NC_012488.1 1834602 1835126 R hypothetical protein complement(1834602..1835126) Listeria monocytogenes serotype 4b str. CLIP 80459 7704082 YP_002758487.1 CDS Lm4b_01793 NC_012488.1 1840512 1841120 R hypothetical protein complement(1840512..1841120) Listeria monocytogenes serotype 4b str. CLIP 80459 7702458 YP_002758488.1 CDS Lm4b_01794 NC_012488.1 1841186 1841959 D ABC transporter ATP-binding protein 1841186..1841959 Listeria monocytogenes serotype 4b str. CLIP 80459 7701713 YP_002758489.1 CDS Lm4b_01795 NC_012488.1 1842009 1842371 D hypothetical protein 1842009..1842371 Listeria monocytogenes serotype 4b str. CLIP 80459 7701714 YP_002758490.1 CDS Lm4b_01796 NC_012488.1 1842390 1843622 R catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T complement(1842390..1843622) Listeria monocytogenes serotype 4b str. CLIP 80459 7701715 YP_002758491.1 CDS Lm4b_01797 NC_012488.1 1843680 1844210 R hypothetical protein complement(1843680..1844210) Listeria monocytogenes serotype 4b str. CLIP 80459 7701716 YP_002758492.1 CDS Lm4b_01798 NC_012488.1 1844294 1845049 D 3'-exo-deoxyribonuclease exoA 1844294..1845049 Listeria monocytogenes serotype 4b str. CLIP 80459 7704219 YP_002758493.1 CDS rplT NC_012488.1 1845090 1845449 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(1845090..1845449) Listeria monocytogenes serotype 4b str. CLIP 80459 7702716 YP_002758494.1 CDS rpmI NC_012488.1 1845489 1845689 R 50S ribosomal protein L35 complement(1845489..1845689) Listeria monocytogenes serotype 4b str. CLIP 80459 7702417 YP_002758495.1 CDS infC NC_012488.1 1845711 1846247 R IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 complement(1845711..1846247) Listeria monocytogenes serotype 4b str. CLIP 80459 7702430 YP_002758496.1 CDS inlC NC_012488.1 1846668 1847558 R internalin C complement(1846668..1847558) Listeria monocytogenes serotype 4b str. CLIP 80459 7702511 YP_002758497.1 CDS rplS NC_012488.1 1848344 1848688 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(1848344..1848688) Listeria monocytogenes serotype 4b str. CLIP 80459 7702514 YP_002758498.1 CDS Lm4b_01804 NC_012488.1 1848897 1849331 D transcription regulator 1848897..1849331 Listeria monocytogenes serotype 4b str. CLIP 80459 7702416 YP_002758499.1 CDS Lm4b_01805 NC_012488.1 1849331 1849942 D Nad(P)h Oxidoreductase chain B 1849331..1849942 Listeria monocytogenes serotype 4b str. CLIP 80459 7702604 YP_002758500.1 CDS Lm4b_01806 NC_012488.1 1849939 1850655 D hypothetical protein 1849939..1850655 Listeria monocytogenes serotype 4b str. CLIP 80459 7702605 YP_002758501.1 CDS Lm4b_01807 NC_012488.1 1850686 1851075 R hypothetical protein complement(1850686..1851075) Listeria monocytogenes serotype 4b str. CLIP 80459 7702606 YP_002758502.1 CDS trmD NC_012488.1 1851095 1851832 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(1851095..1851832) Listeria monocytogenes serotype 4b str. CLIP 80459 7702607 YP_002758503.1 CDS rimM NC_012488.1 1851832 1852350 R Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM complement(1851832..1852350) Listeria monocytogenes serotype 4b str. CLIP 80459 7701607 YP_002758504.1 CDS Lm4b_01810 NC_012488.1 1852360 1852746 R hypothetical protein complement(1852360..1852746) Listeria monocytogenes serotype 4b str. CLIP 80459 7702608 YP_002758505.1 CDS Lm4b_01811 NC_012488.1 1852774 1853508 R hypothetical protein complement(1852774..1853508) Listeria monocytogenes serotype 4b str. CLIP 80459 7702609 YP_002758506.1 CDS Lm4b_01812 NC_012488.1 1853619 1853849 R hypothetical protein complement(1853619..1853849) Listeria monocytogenes serotype 4b str. CLIP 80459 7702610 YP_002758507.1 CDS rpsP NC_012488.1 1853866 1854138 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(1853866..1854138) Listeria monocytogenes serotype 4b str. CLIP 80459 7702611 YP_002758508.1 CDS Lm4b_01814 NC_012488.1 1854241 1855899 R hypothetical protein complement(1854241..1855899) Listeria monocytogenes serotype 4b str. CLIP 80459 7702449 YP_002758509.1 CDS Lm4b_01815 NC_012488.1 1855973 1858498 R peptidoglycan bound protein (LPXTG motif) complement(1855973..1858498) Listeria monocytogenes serotype 4b str. CLIP 80459 7702612 YP_002758510.1 CDS Lm4b_01816 NC_012488.1 1858978 1859874 R protein-tyrosine phosphatase complement(1858978..1859874) Listeria monocytogenes serotype 4b str. CLIP 80459 7702613 YP_002758511.1 CDS ffh NC_012488.1 1860017 1861369 R signal recognition particle protein Ffh complement(1860017..1861369) Listeria monocytogenes serotype 4b str. CLIP 80459 7702614 YP_002758512.1 CDS Lm4b_01818 NC_012488.1 1861382 1861714 R putative DNA-binding protein complement(1861382..1861714) Listeria monocytogenes serotype 4b str. CLIP 80459 7702901 YP_002758513.1 CDS Lm4b_01819 NC_012488.1 1861827 1862813 R SRP receptor alpha-subunit complement(1861827..1862813) Listeria monocytogenes serotype 4b str. CLIP 80459 7702615 YP_002758514.1 CDS smc NC_012488.1 1862828 1866388 R Smc protein complement(1862828..1866388) Listeria monocytogenes serotype 4b str. CLIP 80459 7702616 YP_002758515.1 CDS rnc NC_012488.1 1866411 1867100 R cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III complement(1866411..1867100) Listeria monocytogenes serotype 4b str. CLIP 80459 7701589 YP_002758516.1 CDS acpP NC_012488.1 1867295 1867528 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(1867295..1867528) Listeria monocytogenes serotype 4b str. CLIP 80459 7702596 YP_002758517.1 CDS fabG NC_012488.1 1867635 1868378 R 3-ketoacyl-acyl carrier protein reductase complement(1867635..1868378) Listeria monocytogenes serotype 4b str. CLIP 80459 7704358 YP_002758518.1 CDS fabD NC_012488.1 1868382 1869323 R malonyl CoA-acyl carrier protein transacylase complement(1868382..1869323) Listeria monocytogenes serotype 4b str. CLIP 80459 7702898 YP_002758519.1 CDS plsX NC_012488.1 1869316 1870329 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX complement(1869316..1870329) Listeria monocytogenes serotype 4b str. CLIP 80459 7702897 YP_002758520.1 CDS Lm4b_01826 NC_012488.1 1870350 1870919 R negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria; fatty acid biosynthesis transcriptional regulator complement(1870350..1870919) Listeria monocytogenes serotype 4b str. CLIP 80459 7704061 YP_002758521.1 CDS Lm4b_01827 NC_012488.1 1871101 1873149 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(1871101..1873149) Listeria monocytogenes serotype 4b str. CLIP 80459 7702617 YP_002758522.1 CDS Lm4b_01828 NC_012488.1 1873142 1874032 R L-serine dehydratase (alpha chain) complement(1873142..1874032) Listeria monocytogenes serotype 4b str. CLIP 80459 7702618 YP_002758523.1 CDS Lm4b_01829 NC_012488.1 1874168 1874830 R L-serine dehydratase (beta chain) complement(1874168..1874830) Listeria monocytogenes serotype 4b str. CLIP 80459 7702619 YP_002758524.1 CDS Lm4b_01830 NC_012488.1 1874870 1876528 R hypothetical protein complement(1874870..1876528) Listeria monocytogenes serotype 4b str. CLIP 80459 7702620 YP_002758525.1 CDS Lm4b_01831 NC_012488.1 1876543 1876908 R hypothetical protein complement(1876543..1876908) Listeria monocytogenes serotype 4b str. CLIP 80459 7702621 YP_002758526.1 CDS rpmB NC_012488.1 1877207 1877395 D required for 70S ribosome assembly; 50S ribosomal protein L28 1877207..1877395 Listeria monocytogenes serotype 4b str. CLIP 80459 7702622 YP_002758527.1 CDS Lm4b_01833 NC_012488.1 1877492 1878136 R thiamin pyrophosphokinase complement(1877492..1878136) Listeria monocytogenes serotype 4b str. CLIP 80459 7702423 YP_002758528.1 CDS Lm4b_01834 NC_012488.1 1878200 1878856 R catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase complement(1878200..1878856) Listeria monocytogenes serotype 4b str. CLIP 80459 7702623 YP_002758529.1 CDS Lm4b_01835 NC_012488.1 1878859 1879734 R EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase complement(1878859..1879734) Listeria monocytogenes serotype 4b str. CLIP 80459 7702624 YP_002758530.1 CDS Lm4b_01836 NC_012488.1 1879753 1881720 R serine/threonine-specific protein kinase complement(1879753..1881720) Listeria monocytogenes serotype 4b str. CLIP 80459 7702625 YP_002758531.1 CDS Lm4b_01837 NC_012488.1 1881717 1882475 R phosphoprotein phosphatase complement(1881717..1882475) Listeria monocytogenes serotype 4b str. CLIP 80459 7702626 YP_002758532.1 CDS Lm4b_01838 NC_012488.1 1882498 1883832 R RNA-binding Sun protein complement(1882498..1883832) Listeria monocytogenes serotype 4b str. CLIP 80459 7702627 YP_002758533.1 CDS fmt NC_012488.1 1883833 1884771 R methionyl-tRNA formyltransferase complement(1883833..1884771) Listeria monocytogenes serotype 4b str. CLIP 80459 7702628 YP_002758534.1 CDS priA NC_012488.1 1884785 1887178 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(1884785..1887178) Listeria monocytogenes serotype 4b str. CLIP 80459 7702906 YP_002758535.1 CDS Lm4b_01841 NC_012488.1 1887183 1888382 R pantothenate metabolism flavoprotein complement(1887183..1888382) Listeria monocytogenes serotype 4b str. CLIP 80459 7704069 YP_002758536.1 CDS rpoZ NC_012488.1 1888537 1888743 R Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(1888537..1888743) Listeria monocytogenes serotype 4b str. CLIP 80459 7702629 YP_002758537.1 CDS gmk NC_012488.1 1888740 1889357 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(1888740..1889357) Listeria monocytogenes serotype 4b str. CLIP 80459 7702630 YP_002758538.1 CDS Lm4b_01844 NC_012488.1 1889376 1890251 R hypothetical protein complement(1889376..1890251) Listeria monocytogenes serotype 4b str. CLIP 80459 7702631 YP_002758539.1 CDS Lm4b_01845 NC_012488.1 1890408 1892120 D fibronectin binding protein 1890408..1892120 Listeria monocytogenes serotype 4b str. CLIP 80459 7702633 YP_002758540.1 CDS Lm4b_01846b NC_012488.1 1892208 1892807 D short chain dehydrogenase 1892208..1892807 Listeria monocytogenes serotype 4b str. CLIP 80459 7702634 YP_002758541.1 CDS pyrE NC_012488.1 1892847 1893476 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(1892847..1893476) Listeria monocytogenes serotype 4b str. CLIP 80459 7702635 YP_002758542.1 CDS pyrF NC_012488.1 1893473 1894174 R type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(1893473..1894174) Listeria monocytogenes serotype 4b str. CLIP 80459 7702636 YP_002758543.1 CDS pyrD NC_012488.1 1894171 1895085 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B complement(1894171..1895085) Listeria monocytogenes serotype 4b str. CLIP 80459 7702575 YP_002758544.1 CDS pyrDII NC_012488.1 1895082 1895846 R dihydroorotate dehydrogenase (electron transfer subunit) complement(1895082..1895846) Listeria monocytogenes serotype 4b str. CLIP 80459 7702572 YP_002758545.1 CDS carB NC_012488.1 1895869 1899081 R four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit complement(1895869..1899081) Listeria monocytogenes serotype 4b str. CLIP 80459 7702573 YP_002758546.1 CDS pyrAa NC_012488.1 1899074 1900165 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(1899074..1900165) Listeria monocytogenes serotype 4b str. CLIP 80459 7702569 YP_002758547.1 CDS pyrC NC_012488.1 1900162 1901442 R catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase complement(1900162..1901442) Listeria monocytogenes serotype 4b str. CLIP 80459 7702485 YP_002758548.1 CDS pyrB NC_012488.1 1901430 1902341 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit complement(1901430..1902341) Listeria monocytogenes serotype 4b str. CLIP 80459 7702571 YP_002758549.1 CDS pyrP NC_012488.1 1902422 1903708 R uracil permease complement(1902422..1903708) Listeria monocytogenes serotype 4b str. CLIP 80459 7702570 YP_002758550.1 CDS pyrR NC_012488.1 1903837 1904388 R regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase complement(1903837..1904388) Listeria monocytogenes serotype 4b str. CLIP 80459 7702577 YP_002758551.1 CDS Lm4b_01857 NC_012488.1 1904620 1904850 D hypothetical protein 1904620..1904850 Listeria monocytogenes serotype 4b str. CLIP 80459 7702578 YP_002758552.1 CDS Lm4b_01858 NC_012488.1 1904938 1905762 D hypothetical protein 1904938..1905762 Listeria monocytogenes serotype 4b str. CLIP 80459 7704383 YP_002758553.1 CDS Lm4b_01859 NC_012488.1 1905780 1906691 R hypothetical protein complement(1905780..1906691) Listeria monocytogenes serotype 4b str. CLIP 80459 7702963 YP_002758554.1 CDS lspA NC_012488.1 1906691 1907155 R lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase complement(1906691..1907155) Listeria monocytogenes serotype 4b str. CLIP 80459 7702964 YP_002758555.1 CDS Lm4b_01861 NC_012488.1 1907237 1908520 R hypothetical protein complement(1907237..1908520) Listeria monocytogenes serotype 4b str. CLIP 80459 7702540 YP_002758556.1 CDS Lm4b_01862 NC_012488.1 1908694 1910064 D NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; multidrug efflux protein 1908694..1910064 Listeria monocytogenes serotype 4b str. CLIP 80459 7702965 YP_002758557.1 CDS mntA NC_012488.1 1910080 1911012 R Manganese-binding lipoprotein mntA complement(1910080..1911012) Listeria monocytogenes serotype 4b str. CLIP 80459 7702966 YP_002758558.1 CDS Lm4b_01864 NC_012488.1 1911009 1911851 R metal cations ABC transporter (permease protein) complement(1911009..1911851) Listeria monocytogenes serotype 4b str. CLIP 80459 7702559 YP_002758559.1 CDS Lm4b_01865 NC_012488.1 1911855 1912577 R metal cations ABC transporter, ATP-binding proteins complement(1911855..1912577) Listeria monocytogenes serotype 4b str. CLIP 80459 7702967 YP_002758560.1 CDS Lm4b_01866 NC_012488.1 1912737 1913153 R transcriptional regulator (MarR family) complement(1912737..1913153) Listeria monocytogenes serotype 4b str. CLIP 80459 7702968 YP_002758561.1 CDS Lm4b_01867 NC_012488.1 1913190 1914680 R carboxy-terminal processing proteinase complement(1913190..1914680) Listeria monocytogenes serotype 4b str. CLIP 80459 7702969 YP_002758562.1 CDS Lm4b_01868 NC_012488.1 1914835 1915041 R mercuric ion binding protein complement(1914835..1915041) Listeria monocytogenes serotype 4b str. CLIP 80459 7702970 YP_002758563.1 CDS Lm4b_01869 NC_012488.1 1915054 1917267 R heavy metal-transporting ATPase complement(1915054..1917267) Listeria monocytogenes serotype 4b str. CLIP 80459 7702971 YP_002758564.1 CDS Lm4b_01870 NC_012488.1 1917282 1917575 R hypothetical protein complement(1917282..1917575) Listeria monocytogenes serotype 4b str. CLIP 80459 7702972 YP_002758565.1 CDS Lm4b_01871 NC_012488.1 1917699 1918523 R D-alanyl-D-alanine carboxypeptidase complement(1917699..1918523) Listeria monocytogenes serotype 4b str. CLIP 80459 7702973 YP_002758566.1 CDS deoD NC_012488.1 1918581 1919282 R catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase complement(1918581..1919282) Listeria monocytogenes serotype 4b str. CLIP 80459 7702974 YP_002758567.1 CDS Lm4b_01873 NC_012488.1 1919294 1919527 R hypothetical protein complement(1919294..1919527) Listeria monocytogenes serotype 4b str. CLIP 80459 7703276 YP_002758568.1 CDS Lm4b_01874 NC_012488.1 1919590 1920495 R oxidoreductase complement(1919590..1920495) Listeria monocytogenes serotype 4b str. CLIP 80459 7702975 YP_002758569.1 CDS Lm4b_01875 NC_012488.1 1920578 1921015 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B complement(1920578..1921015) Listeria monocytogenes serotype 4b str. CLIP 80459 7702976 YP_002758570.1 CDS Lm4b_01876 NC_012488.1 1921022 1921555 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A complement(1921022..1921555) Listeria monocytogenes serotype 4b str. CLIP 80459 7702977 YP_002758571.1 CDS Lm4b_01877 NC_012488.1 1921591 1922205 R hypothetical protein complement(1921591..1922205) Listeria monocytogenes serotype 4b str. CLIP 80459 7702978 YP_002758572.1 CDS Lm4b_01878 NC_012488.1 1922221 1923006 R hypothetical protein complement(1922221..1923006) Listeria monocytogenes serotype 4b str. CLIP 80459 7702979 YP_002758573.1 CDS Lm4b_01879 NC_012488.1 1923021 1923860 R hypothetical protein complement(1923021..1923860) Listeria monocytogenes serotype 4b str. CLIP 80459 7702980 YP_002758574.1 CDS Lm4b_01880 NC_012488.1 1924039 1924671 D hemolysin III 1924039..1924671 Listeria monocytogenes serotype 4b str. CLIP 80459 7702981 YP_002758575.1 CDS Lm4b_01881 NC_012488.1 1924793 1925410 D hypothetical protein 1924793..1925410 Listeria monocytogenes serotype 4b str. CLIP 80459 7702982 YP_002758576.1 CDS Lm4b_01882 NC_012488.1 1925423 1926235 D hypothetical protein 1925423..1926235 Listeria monocytogenes serotype 4b str. CLIP 80459 7702983 YP_002758577.1 CDS Lm4b_01883 NC_012488.1 1926254 1928893 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 1926254..1928893 Listeria monocytogenes serotype 4b str. CLIP 80459 7702984 YP_002758578.1 CDS Lm4b_01884 NC_012488.1 1928943 1929320 R hypothetical protein complement(1928943..1929320) Listeria monocytogenes serotype 4b str. CLIP 80459 7702985 YP_002758579.1 CDS Lm4b_01885 NC_012488.1 1929324 1930307 R hypothetical protein complement(1929324..1930307) Listeria monocytogenes serotype 4b str. CLIP 80459 7702986 YP_002758580.1 CDS Lm4b_01886 NC_012488.1 1930401 1931024 R alkaline phosphatase complement(1930401..1931024) Listeria monocytogenes serotype 4b str. CLIP 80459 7702987 YP_002758581.1 CDS Lm4b_01887 NC_012488.1 1931161 1932513 R hypothetical protein complement(1931161..1932513) Listeria monocytogenes serotype 4b str. CLIP 80459 7702988 YP_002758582.1 CDS Lm4b_01888 NC_012488.1 1932768 1934279 R phosphoglucomutase complement(1932768..1934279) Listeria monocytogenes serotype 4b str. CLIP 80459 7702989 YP_002758583.1 CDS Lm4b_01889 NC_012488.1 1934348 1935223 R methyltransferase complement(1934348..1935223) Listeria monocytogenes serotype 4b str. CLIP 80459 7702990 YP_002758584.1 CDS Lm4b_01890 NC_012488.1 1935276 1935758 R dihydrofolate reductase complement(1935276..1935758) Listeria monocytogenes serotype 4b str. CLIP 80459 7702991 YP_002758585.1 CDS thyA NC_012488.1 1935774 1936718 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(1935774..1936718) Listeria monocytogenes serotype 4b str. CLIP 80459 7702992 YP_002758586.1 CDS Lm4b_01892 NC_012488.1 1936731 1938623 R ABC transporter ATP-binding protein complement(1936731..1938623) Listeria monocytogenes serotype 4b str. CLIP 80459 7702993 YP_002758587.1 CDS Lm4b_01893 NC_012488.1 1938743 1940425 R catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase complement(1938743..1940425) Listeria monocytogenes serotype 4b str. CLIP 80459 7702994 YP_002758588.1 CDS Lm4b_01894 NC_012488.1 1940583 1941011 R involved in manganese homeostasis; activates the transcription of the mntABCD operon; manganese transport transcriptional regulator complement(1940583..1941011) Listeria monocytogenes serotype 4b str. CLIP 80459 7702995 YP_002758589.1 CDS Lm4b_01895 NC_012488.1 1941376 1941576 D cold shock protein 1941376..1941576 Listeria monocytogenes serotype 4b str. CLIP 80459 7702996 YP_002758590.1 CDS Lm4b_01896 NC_012488.1 1941700 1942101 D RNase HI 1941700..1942101 Listeria monocytogenes serotype 4b str. CLIP 80459 7702997 YP_002758591.1 CDS Lm4b_01897 NC_012488.1 1942120 1942992 R 5'-3' exonuclease complement(1942120..1942992) Listeria monocytogenes serotype 4b str. CLIP 80459 7702998 YP_002758592.1 CDS rpsN NC_012488.1 1943070 1943339 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 complement(1943070..1943339) Listeria monocytogenes serotype 4b str. CLIP 80459 7702999 YP_002758593.1 CDS Lm4b_01899 NC_012488.1 1943463 1944521 R chitinase complement(1943463..1944521) Listeria monocytogenes serotype 4b str. CLIP 80459 7703000 YP_002758594.1 CDS Lm4b_01900 NC_012488.1 1944713 1946020 R xanthine permease complement(1944713..1946020) Listeria monocytogenes serotype 4b str. CLIP 80459 7703001 YP_002758595.1 CDS Lm4b_01901 NC_012488.1 1946027 1946605 R Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase complement(1946027..1946605) Listeria monocytogenes serotype 4b str. CLIP 80459 7703002 YP_002758596.1 CDS Lm4b_01902 NC_012488.1 1946833 1948341 R thermostable carboxypeptidase complement(1946833..1948341) Listeria monocytogenes serotype 4b str. CLIP 80459 7703003 YP_002758597.1 CDS Lm4b_01903 NC_012488.1 1948361 1949509 R hypothetical protein complement(1948361..1949509) Listeria monocytogenes serotype 4b str. CLIP 80459 7703004 YP_002758598.1 CDS Lm4b_01904 NC_012488.1 1949585 1949869 R hypothetical protein complement(1949585..1949869) Listeria monocytogenes serotype 4b str. CLIP 80459 7703005 YP_002758599.1 CDS Lm4b_01905 NC_012488.1 1950089 1950430 R hypothetical protein complement(1950089..1950430) Listeria monocytogenes serotype 4b str. CLIP 80459 7703006 YP_002758600.1 CDS Lm4b_01906 NC_012488.1 1950562 1951107 R hypothetical protein complement(1950562..1951107) Listeria monocytogenes serotype 4b str. CLIP 80459 7703007 YP_002758601.1 CDS Lm4b_01907 NC_012488.1 1951104 1951469 R hypothetical protein complement(1951104..1951469) Listeria monocytogenes serotype 4b str. CLIP 80459 7703008 YP_002758602.1 CDS recU NC_012488.1 1951716 1952321 D functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC; Holliday junction-specific endonuclease 1951716..1952321 Listeria monocytogenes serotype 4b str. CLIP 80459 7703009 YP_002758603.1 CDS pbpA NC_012488.1 1952353 1954836 D penicillin-binding protein 2A 1952353..1954836 Listeria monocytogenes serotype 4b str. CLIP 80459 7702590 YP_002758604.1 CDS Lm4b_01910 NC_012488.1 1954879 1955370 R hypothetical protein complement(1954879..1955370) Listeria monocytogenes serotype 4b str. CLIP 80459 7704037 YP_002758605.1 CDS nth NC_012488.1 1955363 1956022 R endonuclease III (DNA repair) complement(1955363..1956022) Listeria monocytogenes serotype 4b str. CLIP 80459 7703010 YP_002758606.1 CDS dnaD NC_012488.1 1956033 1956752 R chromosome replication initiation protein complement(1956033..1956752) Listeria monocytogenes serotype 4b str. CLIP 80459 7704023 YP_002758607.1 CDS asnC NC_012488.1 1956902 1958194 R catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase complement(1956902..1958194) Listeria monocytogenes serotype 4b str. CLIP 80459 7702882 YP_002758608.1 CDS aspB NC_012488.1 1958208 1959389 R catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase complement(1958208..1959389) Listeria monocytogenes serotype 4b str. CLIP 80459 7704367 YP_002758609.1 CDS Lm4b_01915 NC_012488.1 1959412 1959996 R hypothetical protein complement(1959412..1959996) Listeria monocytogenes serotype 4b str. CLIP 80459 7704382 YP_002758610.1 CDS dinG NC_012488.1 1960041 1962827 R unwinds DNA; bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon complement(1960041..1962827) Listeria monocytogenes serotype 4b str. CLIP 80459 7703011 YP_002758611.1 CDS panD NC_012488.1 1962924 1963307 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(1962924..1963307) Listeria monocytogenes serotype 4b str. CLIP 80459 7703277 YP_002758612.1 CDS panC NC_012488.1 1963311 1964168 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(1963311..1964168) Listeria monocytogenes serotype 4b str. CLIP 80459 7704032 YP_002758613.1 CDS panB NC_012488.1 1964172 1965005 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(1964172..1965005) Listeria monocytogenes serotype 4b str. CLIP 80459 7704031 YP_002758614.1 CDS Lm4b_01920 NC_012488.1 1965172 1965645 R thioredoxin complement(1965172..1965645) Listeria monocytogenes serotype 4b str. CLIP 80459 7704030 YP_002758615.1 CDS birA NC_012488.1 1965793 1966770 R transcriptional regulator and biotin acetyl-CoA-carboxylase synthetase complement(1965793..1966770) Listeria monocytogenes serotype 4b str. CLIP 80459 7703012 YP_002758616.1 CDS cca NC_012488.1 1966760 1967941 R catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity; tRNA CCA-pyrophosphorylase complement(1966760..1967941) Listeria monocytogenes serotype 4b str. CLIP 80459 7703217 YP_002758617.1 CDS mgsA NC_012488.1 1967956 1968360 R catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase complement(1967956..1968360) Listeria monocytogenes serotype 4b str. CLIP 80459 7703230 YP_002758618.1 CDS dapB NC_012488.1 1968376 1969167 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(1968376..1969167) Listeria monocytogenes serotype 4b str. CLIP 80459 7703013 YP_002758619.1 CDS Lm4b_01925 NC_012488.1 1969164 1969499 R hypothetical protein complement(1969164..1969499) Listeria monocytogenes serotype 4b str. CLIP 80459 7703274 YP_002758620.1 CDS Lm4b_01926 NC_012488.1 1969640 1970506 D hypothetical protein 1969640..1970506 Listeria monocytogenes serotype 4b str. CLIP 80459 7703014 YP_002758621.1 CDS Lm4b_01927 NC_012488.1 1970496 1971602 R oxidoreductase complement(1970496..1971602) Listeria monocytogenes serotype 4b str. CLIP 80459 7703015 YP_002758622.1 CDS Lm4b_01928 NC_012488.1 1971922 1973058 D GGDEF domain protein 1971922..1973058 Listeria monocytogenes serotype 4b str. CLIP 80459 7703016 YP_002758623.1 CDS Lm4b_01929 NC_012488.1 1973084 1974211 D GGDEF domain protein 1973084..1974211 Listeria monocytogenes serotype 4b str. CLIP 80459 7703017 YP_002758624.1 CDS Lm4b_01930 NC_012488.1 1974208 1975212 D hypothetical protein 1974208..1975212 Listeria monocytogenes serotype 4b str. CLIP 80459 7703018 YP_002758625.1 CDS Lm4b_01931 NC_012488.1 1975231 1975914 D hypothetical protein 1975231..1975914 Listeria monocytogenes serotype 4b str. CLIP 80459 7703019 YP_002758626.1 CDS Lm4b_01932 NC_012488.1 1976025 1977668 D malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 1976025..1977668 Listeria monocytogenes serotype 4b str. CLIP 80459 7703020 YP_002758627.1 CDS Lm4b_01933 NC_012488.1 1977671 1978678 D peptidase 1977671..1978678 Listeria monocytogenes serotype 4b str. CLIP 80459 7703021 YP_002758628.1 CDS pflA NC_012488.1 1978911 1981190 D pyruvate formate-lyase 1978911..1981190 Listeria monocytogenes serotype 4b str. CLIP 80459 7703022 YP_002758629.1 CDS Lm4b_01935 NC_012488.1 1981238 1982503 R hypothetical protein complement(1981238..1982503) Listeria monocytogenes serotype 4b str. CLIP 80459 7703023 YP_002758630.1 CDS Lm4b_01936 NC_012488.1 1982613 1983296 R hypothetical protein complement(1982613..1983296) Listeria monocytogenes serotype 4b str. CLIP 80459 7703024 YP_002758631.1 CDS Lm4b_01937 NC_012488.1 1983383 1983979 R hypothetical protein complement(1983383..1983979) Listeria monocytogenes serotype 4b str. CLIP 80459 7703025 YP_002758632.1 CDS Lm4b_01938 NC_012488.1 1984067 1984612 R hypothetical protein complement(1984067..1984612) Listeria monocytogenes serotype 4b str. CLIP 80459 7703026 YP_002758633.1 CDS Lm4b_01939 NC_012488.1 1984648 1985901 R hypothetical protein complement(1984648..1985901) Listeria monocytogenes serotype 4b str. CLIP 80459 7703027 YP_002758634.1 CDS aroE NC_012488.1 1986033 1987319 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(1986033..1987319) Listeria monocytogenes serotype 4b str. CLIP 80459 7703028 YP_002758635.1 CDS tyrA NC_012488.1 1987333 1988436 R catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase complement(1987333..1988436) Listeria monocytogenes serotype 4b str. CLIP 80459 7704379 YP_002758636.1 CDS hisC NC_012488.1 1988457 1989539 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(1988457..1989539) Listeria monocytogenes serotype 4b str. CLIP 80459 7701622 YP_002758637.1 CDS Lm4b_01943 NC_012488.1 1989539 1989913 R chorismate mutase complement(1989539..1989913) Listeria monocytogenes serotype 4b str. CLIP 80459 7702490 YP_002758638.1 CDS aroB NC_012488.1 1989910 1991007 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(1989910..1991007) Listeria monocytogenes serotype 4b str. CLIP 80459 7703029 YP_002758639.1 CDS aroF NC_012488.1 1991010 1992176 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(1991010..1992176) Listeria monocytogenes serotype 4b str. CLIP 80459 7704378 YP_002758640.1 CDS ndk NC_012488.1 1992380 1992823 R catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase complement(1992380..1992823) Listeria monocytogenes serotype 4b str. CLIP 80459 7704380 YP_002758641.1 CDS Lm4b_01947 NC_012488.1 1992842 1993807 R heptaprenyl diphosphate synthase component II (menaquinone biosynthesis) complement(1992842..1993807) Listeria monocytogenes serotype 4b str. CLIP 80459 7704021 YP_002758642.1 CDS ubiE NC_012488.1 1993818 1994531 R Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase complement(1993818..1994531) Listeria monocytogenes serotype 4b str. CLIP 80459 7703030 YP_002758643.1 CDS Lm4b_01949 NC_012488.1 1994554 1995321 R heptaprenyl diphosphate synthase component I complement(1994554..1995321) Listeria monocytogenes serotype 4b str. CLIP 80459 7702552 YP_002758644.1 CDS folE NC_012488.1 1995378 1995947 R involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I complement(1995378..1995947) Listeria monocytogenes serotype 4b str. CLIP 80459 7703031 YP_002758645.1 CDS hup NC_012488.1 1996183 1996458 R non-specific DNA-binding protein HU complement(1996183..1996458) Listeria monocytogenes serotype 4b str. CLIP 80459 7703032 YP_002758646.1 CDS Lm4b_01952 NC_012488.1 1996869 1997849 R protein-tyrosine/serine phosphatase complement(1996869..1997849) Listeria monocytogenes serotype 4b str. CLIP 80459 7702501 YP_002758647.1 CDS gpsA NC_012488.1 1997952 1998968 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(1997952..1998968) Listeria monocytogenes serotype 4b str. CLIP 80459 7703033 YP_002758648.1 CDS engA NC_012488.1 1998991 2000301 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(1998991..2000301) Listeria monocytogenes serotype 4b str. CLIP 80459 7702947 YP_002758649.1 CDS rpsA NC_012488.1 2000445 2001590 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(2000445..2001590) Listeria monocytogenes serotype 4b str. CLIP 80459 7703034 YP_002758650.1 CDS cmk NC_012488.1 2001949 2002623 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(2001949..2002623) Listeria monocytogenes serotype 4b str. CLIP 80459 7703035 YP_002758651.1 CDS Lm4b_01957 NC_012488.1 2002639 2003601 R asparaginase complement(2002639..2003601) Listeria monocytogenes serotype 4b str. CLIP 80459 7703246 YP_002758652.1 CDS Lm4b_01959 NC_012488.1 2003682 2004401 R hypothetical protein complement(2003682..2004401) Listeria monocytogenes serotype 4b str. CLIP 80459 7703036 YP_002758653.1 CDS recS NC_012488.1 2004721 2006124 R ATP-dependent DNA helicase complement(2004721..2006124) Listeria monocytogenes serotype 4b str. CLIP 80459 7703037 YP_002758654.1 CDS Lm4b_01961 NC_012488.1 2006121 2007128 R hypothetical protein complement(2006121..2007128) Listeria monocytogenes serotype 4b str. CLIP 80459 7702589 YP_002758655.1 CDS Lm4b_01962 NC_012488.1 2007283 2007507 D ferredoxin 2007283..2007507 Listeria monocytogenes serotype 4b str. CLIP 80459 7703038 YP_002758656.1 CDS Lm4b_01963 NC_012488.1 2007571 2013582 R peptidoglycan bound protein (LPXTG motif) complement(2007571..2013582) Listeria monocytogenes serotype 4b str. CLIP 80459 7703039 YP_002758657.1 CDS Lm4b_01964 NC_012488.1 2013848 2014459 R hypothetical protein complement(2013848..2014459) Listeria monocytogenes serotype 4b str. CLIP 80459 7703040 YP_002758658.1 CDS Lm4b_01965 NC_012488.1 2014901 2015419 R acyl-CoA hydrolase complement(2014901..2015419) Listeria monocytogenes serotype 4b str. CLIP 80459 7703041 YP_002758659.1 CDS resE NC_012488.1 2015435 2017225 R two-component sensor histidine kinase (ResE) complement(2015435..2017225) Listeria monocytogenes serotype 4b str. CLIP 80459 7703042 YP_002758660.1 CDS resD NC_012488.1 2017326 2018042 R two-component response regulator (ResD) complement(2017326..2018042) Listeria monocytogenes serotype 4b str. CLIP 80459 7702593 YP_002758661.1 CDS Lm4b_01968 NC_012488.1 2018225 2018959 R hypothetical protein complement(2018225..2018959) Listeria monocytogenes serotype 4b str. CLIP 80459 7702592 YP_002758662.1 CDS Lm4b_01969 NC_012488.1 2018962 2019558 R hypothetical protein complement(2018962..2019558) Listeria monocytogenes serotype 4b str. CLIP 80459 7703043 YP_002758663.1 CDS scpA NC_012488.1 2019555 2020304 R functions during chromosome segregation; may form a condensin-like structure with SMC and ScpB; segregation and condensation protein A complement(2019555..2020304) Listeria monocytogenes serotype 4b str. CLIP 80459 7703930 YP_002758664.1 CDS lysA NC_012488.1 2020320 2021630 R diaminopimelate decarboxylase complement(2020320..2021630) Listeria monocytogenes serotype 4b str. CLIP 80459 7703931 YP_002758665.1 CDS pnp NC_012488.1 2021811 2022629 R catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase complement(2021811..2022629) Listeria monocytogenes serotype 4b str. CLIP 80459 7702543 YP_002758666.1 CDS drm NC_012488.1 2022648 2023832 R catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase complement(2022648..2023832) Listeria monocytogenes serotype 4b str. CLIP 80459 7704062 YP_002758667.1 CDS Lm4b_01974 NC_012488.1 2023861 2024754 R integrase/recombinase complement(2023861..2024754) Listeria monocytogenes serotype 4b str. CLIP 80459 7702891 YP_002758668.1 CDS fur NC_012488.1 2024908 2025360 R transcriptional regulator (Fur family) complement(2024908..2025360) Listeria monocytogenes serotype 4b str. CLIP 80459 7703932 YP_002758669.1 CDS fhuG NC_012488.1 2025602 2026624 R ferrichrome ABC transporter (permease) complement(2025602..2026624) Listeria monocytogenes serotype 4b str. CLIP 80459 7702922 YP_002758670.1 CDS fhuB NC_012488.1 2026624 2027649 R ferrichrome ABC transporter (permease) complement(2026624..2027649) Listeria monocytogenes serotype 4b str. CLIP 80459 7702904 YP_002758671.1 CDS Lm4b_01978 NC_012488.1 2027751 2028692 R hypothetical protein complement(2027751..2028692) Listeria monocytogenes serotype 4b str. CLIP 80459 7702902 YP_002758672.1 CDS fhuC NC_012488.1 2028857 2029681 D ferrichrome ABC transporter (ATP-binding protein) 2028857..2029681 Listeria monocytogenes serotype 4b str. CLIP 80459 7703933 YP_002758673.1 CDS Lm4b_01980 NC_012488.1 2029671 2030669 D hypothetical protein 2029671..2030669 Listeria monocytogenes serotype 4b str. CLIP 80459 7703934 YP_002758674.1 CDS Lm4b_01981 NC_012488.1 2030685 2031305 R TetR family transcriptional regulator complement(2030685..2031305) Listeria monocytogenes serotype 4b str. CLIP 80459 7703935 YP_002758675.1 CDS Lm4b_01982 NC_012488.1 2031305 2032120 R hypothetical protein complement(2031305..2032120) Listeria monocytogenes serotype 4b str. CLIP 80459 7703936 YP_002758676.1 CDS Lm4b_01983 NC_012488.1 2032117 2033004 R ABC transporter ATP-binding protein complement(2032117..2033004) Listeria monocytogenes serotype 4b str. CLIP 80459 7703937 YP_002758677.1 CDS Lm4b_01984 NC_012488.1 2033478 2034035 R hypothetical protein complement(2033478..2034035) Listeria monocytogenes serotype 4b str. CLIP 80459 7703938 YP_002758678.1 CDS Lm4b_01985 NC_012488.1 2034309 2034968 D hypothetical protein 2034309..2034968 Listeria monocytogenes serotype 4b str. CLIP 80459 7703939 YP_002758679.1 CDS Lm4b_01986 NC_012488.1 2034946 2036145 D toxic ion resistance protein 2034946..2036145 Listeria monocytogenes serotype 4b str. CLIP 80459 7703940 YP_002758680.1 CDS Lm4b_01987 NC_012488.1 2036182 2037252 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(2036182..2037252) Listeria monocytogenes serotype 4b str. CLIP 80459 7703941 YP_002758681.1 CDS Lm4b_01988b NC_012488.1 2037361 2038152 R oxidoreductase complement(2037361..2038152) Listeria monocytogenes serotype 4b str. CLIP 80459 7703942 YP_002758682.1 CDS Lm4b_01989 NC_012488.1 2038157 2039077 R hypothetical protein complement(2038157..2039077) Listeria monocytogenes serotype 4b str. CLIP 80459 7703943 YP_002758683.1 CDS Lm4b_01990 NC_012488.1 2039378 2040853 D catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 2039378..2040853 Listeria monocytogenes serotype 4b str. CLIP 80459 7703944 YP_002758684.1 CDS Lm4b_01991 NC_012488.1 2040972 2041403 D hypothetical protein 2040972..2041403 Listeria monocytogenes serotype 4b str. CLIP 80459 7703946 YP_002758685.1 CDS Lm4b_01992 NC_012488.1 2041435 2041572 D hypothetical protein 2041435..2041572 Listeria monocytogenes serotype 4b str. CLIP 80459 7703947 YP_002758686.1 CDS Lm4b_01993 NC_012488.1 2041555 2042040 R hypothetical protein complement(2041555..2042040) Listeria monocytogenes serotype 4b str. CLIP 80459 7703948 YP_002758687.1 CDS Lm4b_01994 NC_012488.1 2042013 2042540 R hypothetical protein complement(2042013..2042540) Listeria monocytogenes serotype 4b str. CLIP 80459 7703949 YP_002758688.1 CDS ilvD NC_012488.1 2043231 2044925 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2043231..2044925 Listeria monocytogenes serotype 4b str. CLIP 80459 7703950 YP_002758689.1 CDS ilvB NC_012488.1 2044943 2046664 D acetolactate synthase (acetohydroxy-acid synthase) (large subunit) 2044943..2046664 Listeria monocytogenes serotype 4b str. CLIP 80459 7702507 YP_002758690.1 CDS ilvH NC_012488.1 2046665 2047156 D with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 2046665..2047156 Listeria monocytogenes serotype 4b str. CLIP 80459 7702505 YP_002758691.1 CDS ilvC NC_012488.1 2047255 2048250 D catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2047255..2048250 Listeria monocytogenes serotype 4b str. CLIP 80459 7702508 YP_002758692.1 CDS leuA NC_012488.1 2048409 2049947 D catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 2048409..2049947 Listeria monocytogenes serotype 4b str. CLIP 80459 7702506 YP_002758693.1 CDS leuB NC_012488.1 2049949 2051001 D catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 2049949..2051001 Listeria monocytogenes serotype 4b str. CLIP 80459 7702528 YP_002758694.1 CDS leuC NC_012488.1 2051003 2052391 D dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2051003..2052391 Listeria monocytogenes serotype 4b str. CLIP 80459 7702529 YP_002758695.1 CDS leuD NC_012488.1 2052378 2052959 D catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 2052378..2052959 Listeria monocytogenes serotype 4b str. CLIP 80459 7702530 YP_002758696.1 CDS ilvA NC_012488.1 2052978 2054246 D catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase 2052978..2054246 Listeria monocytogenes serotype 4b str. CLIP 80459 7702531 YP_002758697.1 CDS Lm4b_02004 NC_012488.1 2054439 2055158 D alpha-acetolactate decarboxylase 2054439..2055158 Listeria monocytogenes serotype 4b str. CLIP 80459 7702504 YP_002758698.1 CDS pdp NC_012488.1 2055195 2056496 R Catalyzes the reversible phosphorolysis of pyrimidines in the nucleotide synthesis salvage pathway; pyrimidine-nucleoside phosphorylase complement(2055195..2056496) Listeria monocytogenes serotype 4b str. CLIP 80459 7703951 YP_002758699.1 CDS Lm4b_02006 NC_012488.1 2056627 2057637 R transcription regulator (LacI family) complement(2056627..2057637) Listeria monocytogenes serotype 4b str. CLIP 80459 7704044 YP_002758700.1 CDS dra NC_012488.1 2057717 2058388 R catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase complement(2057717..2058388) Listeria monocytogenes serotype 4b str. CLIP 80459 7703952 YP_002758701.1 CDS Lm4b_02008 NC_012488.1 2058451 2059398 R transcription repressor of dra/nupC/pdp operon DeoR complement(2058451..2059398) Listeria monocytogenes serotype 4b str. CLIP 80459 7702890 YP_002758702.1 CDS Lm4b_02009 NC_012488.1 2059496 2059912 R PTS mannose-specific enzyme IIA component complement(2059496..2059912) Listeria monocytogenes serotype 4b str. CLIP 80459 7703953 YP_002758703.1 CDS Lm4b_02010 NC_012488.1 2059929 2060924 R opine catabolism protein complement(2059929..2060924) Listeria monocytogenes serotype 4b str. CLIP 80459 7703954 YP_002758704.1 CDS Lm4b_02011 NC_012488.1 2060947 2062011 R glucosamine-fructose-6-phosphate aminotransferase complement(2060947..2062011) Listeria monocytogenes serotype 4b str. CLIP 80459 7703955 YP_002758705.1 CDS Lm4b_02012 NC_012488.1 2062024 2062845 R PTS mannose-specific enzyme IID component complement(2062024..2062845) Listeria monocytogenes serotype 4b str. CLIP 80459 7703956 YP_002758706.1 CDS Lm4b_02013 NC_012488.1 2062826 2063644 R PTS mannose-specific enzyme IIC component complement(2062826..2063644) Listeria monocytogenes serotype 4b str. CLIP 80459 7703957 YP_002758707.1 CDS Lm4b_02014 NC_012488.1 2063667 2064134 R PTS mannose-specific enzyme IIB component complement(2063667..2064134) Listeria monocytogenes serotype 4b str. CLIP 80459 7703958 YP_002758708.1 CDS Lm4b_02015 NC_012488.1 2064154 2064855 R GntR family transcriptional regulator complement(2064154..2064855) Listeria monocytogenes serotype 4b str. CLIP 80459 7703959 YP_002758709.1 CDS Lm4b_02016 NC_012488.1 2064857 2065588 R GntR family transcriptional regulator complement(2064857..2065588) Listeria monocytogenes serotype 4b str. CLIP 80459 7703960 YP_002758710.1 CDS Lm4b_02017 NC_012488.1 2065761 2066756 R oxidoreductase complement(2065761..2066756) Listeria monocytogenes serotype 4b str. CLIP 80459 7703961 YP_002758711.1 CDS alsS NC_012488.1 2066873 2068570 R catalyzes the formation of 2-acetolactate from pyruvate in stationary phase; acetolactate synthase complement(2066873..2068570) Listeria monocytogenes serotype 4b str. CLIP 80459 7703962 YP_002758712.1 CDS Lm4b_02019 NC_012488.1 2068765 2070222 R sugar-binding lipoprotein complement(2068765..2070222) Listeria monocytogenes serotype 4b str. CLIP 80459 7704364 YP_002758713.1 CDS Lm4b_02020 NC_012488.1 2070242 2071213 R ABC transporter permease complement(2070242..2071213) Listeria monocytogenes serotype 4b str. CLIP 80459 7703963 YP_002758714.1 CDS Lm4b_02021 NC_012488.1 2071232 2072161 R transport system integral membrane protein complement(2071232..2072161) Listeria monocytogenes serotype 4b str. CLIP 80459 7703964 YP_002758715.1 CDS Lm4b_02023 NC_012488.1 2073758 2075497 R two-component sensor histidine kinase complement(2073758..2075497) Listeria monocytogenes serotype 4b str. CLIP 80459 7703966 YP_002758716.1 CDS Lm4b_02024 NC_012488.1 2075554 2076165 R hypothetical protein complement(2075554..2076165) Listeria monocytogenes serotype 4b str. CLIP 80459 7703967 YP_002758717.1 CDS Lm4b_02025 NC_012488.1 2076226 2077530 R hypothetical protein complement(2076226..2077530) Listeria monocytogenes serotype 4b str. CLIP 80459 7703970 YP_002758718.1 CDS Lm4b_02026 NC_012488.1 2077534 2080191 R sugar hydrolases complement(2077534..2080191) Listeria monocytogenes serotype 4b str. CLIP 80459 7703971 YP_002758719.1 CDS Lm4b_02027 NC_012488.1 2080434 2083544 D alpha-mannosidase 2080434..2083544 Listeria monocytogenes serotype 4b str. CLIP 80459 7703972 YP_002758720.1 CDS cspB NC_012488.1 2083613 2083813 R major cold-shock protein complement(2083613..2083813) Listeria monocytogenes serotype 4b str. CLIP 80459 7703973 YP_002758721.1 CDS Lm4b_02029 NC_012488.1 2084102 2084797 R hypothetical protein complement(2084102..2084797) Listeria monocytogenes serotype 4b str. CLIP 80459 7703260 YP_002758722.1 CDS dapF NC_012488.1 2084811 2085800 R involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase complement(2084811..2085800) Listeria monocytogenes serotype 4b str. CLIP 80459 7703974 YP_002758723.1 CDS ileS NC_012488.1 2085912 2088677 R IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase complement(2085912..2088677) Listeria monocytogenes serotype 4b str. CLIP 80459 7703975 YP_002758724.1 CDS divIVA NC_012488.1 2088960 2089487 R cell-division initiation protein (septum placement) complement(2088960..2089487) Listeria monocytogenes serotype 4b str. CLIP 80459 7702503 YP_002758725.1 CDS Lm4b_02033 NC_012488.1 2089583 2090104 R hypothetical protein complement(2089583..2090104) Listeria monocytogenes serotype 4b str. CLIP 80459 7703279 YP_002758726.1 CDS Lm4b_02034 NC_012488.1 2090109 2091215 R NifS-like protein required for NAD biosynthesis complement(2090109..2091215) Listeria monocytogenes serotype 4b str. CLIP 80459 7703976 YP_002758727.1 CDS nadB NC_012488.1 2091347 2092801 D catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 2091347..2092801 Listeria monocytogenes serotype 4b str. CLIP 80459 7703977 YP_002758728.1 CDS nadC NC_012488.1 2092798 2093643 D catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 2092798..2093643 Listeria monocytogenes serotype 4b str. CLIP 80459 7704019 YP_002758729.1 CDS nadA NC_012488.1 2093640 2094740 D 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 2093640..2094740 Listeria monocytogenes serotype 4b str. CLIP 80459 7704020 YP_002758730.1 CDS Lm4b_02038 NC_012488.1 2095064 2095330 R transposase complement(2095064..2095330) Listeria monocytogenes serotype 4b str. CLIP 80459 7704018 YP_002758731.1 CDS Lm4b_02039 NC_012488.1 2095405 2095710 R hypothetical protein complement(2095405..2095710) Listeria monocytogenes serotype 4b str. CLIP 80459 7703978 YP_002758732.1 CDS Lm4b_02040 NC_012488.1 2095738 2096223 R hypothetical protein complement(2095738..2096223) Listeria monocytogenes serotype 4b str. CLIP 80459 7703979 YP_002758733.1 CDS Lm4b_02041 NC_012488.1 2096243 2096716 R hypothetical protein complement(2096243..2096716) Listeria monocytogenes serotype 4b str. CLIP 80459 7703980 YP_002758734.1 CDS Lm4b_02042 NC_012488.1 2096782 2098773 R membrane associated lipoprotein complement(2096782..2098773) Listeria monocytogenes serotype 4b str. CLIP 80459 7703981 YP_002758735.1 CDS Lm4b_02043 NC_012488.1 2098909 2100747 R membrane associated lipoprotein complement(2098909..2100747) Listeria monocytogenes serotype 4b str. CLIP 80459 7703982 YP_002758736.1 CDS Lm4b_02044 NC_012488.1 2100882 2102954 R membrane associated lipoprotein complement(2100882..2102954) Listeria monocytogenes serotype 4b str. CLIP 80459 7703983 YP_002758737.1 CDS Lm4b_02045 NC_012488.1 2103090 2105243 R membrane associated lipoprotein complement(2103090..2105243) Listeria monocytogenes serotype 4b str. CLIP 80459 7703984 YP_002758738.1 CDS Lm4b_02046 NC_012488.1 2105506 2107044 R transcription regulator (VirR) complement(2105506..2107044) Listeria monocytogenes serotype 4b str. CLIP 80459 7703985 YP_002758739.1 CDS Lm4b_02047 NC_012488.1 2107066 2107845 R hypothetical protein complement(2107066..2107845) Listeria monocytogenes serotype 4b str. CLIP 80459 7703986 YP_002758740.1 CDS Lm4b_02048 NC_012488.1 2107873 2108466 R hypothetical transcriptional regulator complement(2107873..2108466) Listeria monocytogenes serotype 4b str. CLIP 80459 7703987 YP_002758741.1 CDS Lm4b_02049 NC_012488.1 2109643 2110419 R hypothetical protein complement(2109643..2110419) Listeria monocytogenes serotype 4b str. CLIP 80459 7703988 YP_002758742.1 CDS Lm4b_02050 NC_012488.1 2110544 2110834 R hypothetical protein complement(2110544..2110834) Listeria monocytogenes serotype 4b str. CLIP 80459 7703989 YP_002758743.1 CDS Lm4b_02051 NC_012488.1 2110857 2111315 R hypothetical protein complement(2110857..2111315) Listeria monocytogenes serotype 4b str. CLIP 80459 7703990 YP_002758744.1 CDS Lm4b_02052 NC_012488.1 2111319 2112008 R hypothetical protein complement(2111319..2112008) Listeria monocytogenes serotype 4b str. CLIP 80459 7703991 YP_002758745.1 CDS ftsZ NC_012488.1 2112127 2113302 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(2112127..2113302) Listeria monocytogenes serotype 4b str. CLIP 80459 7703992 YP_002758746.1 CDS ftsA NC_012488.1 2113369 2114649 R cell-division protein FtsA complement(2113369..2114649) Listeria monocytogenes serotype 4b str. CLIP 80459 7702921 YP_002758747.1 CDS divIB NC_012488.1 2115014 2115826 R cell-division initiation protein divIB complement(2115014..2115826) Listeria monocytogenes serotype 4b str. CLIP 80459 7702915 YP_002758748.1 CDS murG NC_012488.1 2115849 2116940 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase complement(2115849..2116940) Listeria monocytogenes serotype 4b str. CLIP 80459 7703278 YP_002758749.1 CDS murD NC_012488.1 2116937 2118304 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(2116937..2118304) Listeria monocytogenes serotype 4b str. CLIP 80459 7704013 YP_002758750.1 CDS mraY NC_012488.1 2118446 2119420 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(2118446..2119420) Listeria monocytogenes serotype 4b str. CLIP 80459 7702568 YP_002758751.1 CDS murE NC_012488.1 2119467 2120942 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(2119467..2120942) Listeria monocytogenes serotype 4b str. CLIP 80459 7702562 YP_002758752.1 CDS pbpB NC_012488.1 2121117 2123372 R penicillin-binding protein 2B complement(2121117..2123372) Listeria monocytogenes serotype 4b str. CLIP 80459 7704011 YP_002758753.1 CDS ftsL NC_012488.1 2123369 2123731 R cell-division protein FtsL complement(2123369..2123731) Listeria monocytogenes serotype 4b str. CLIP 80459 7704038 YP_002758754.1 CDS mraW NC_012488.1 2123748 2124686 R S-adenosyl-methyltransferase MraW complement(2123748..2124686) Listeria monocytogenes serotype 4b str. CLIP 80459 7702918 YP_002758755.1 CDS Lm4b_02063 NC_012488.1 2124699 2125130 R MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ complement(2124699..2125130) Listeria monocytogenes serotype 4b str. CLIP 80459 7703993 YP_002758756.1 CDS Lm4b_02064 NC_012488.1 2125333 2126580 R integral membrane protein complement(2125333..2126580) Listeria monocytogenes serotype 4b str. CLIP 80459 7703994 YP_002758757.1 CDS Lm4b_02065 NC_012488.1 2126697 2128511 D transporter binding protein 2126697..2128511 Listeria monocytogenes serotype 4b str. CLIP 80459 7703995 YP_002758758.1 CDS Lm4b_02066 NC_012488.1 2128441 2128827 R hypothetical protein complement(2128441..2128827) Listeria monocytogenes serotype 4b str. CLIP 80459 7703997 YP_002758759.1 CDS Lm4b_02067 NC_012488.1 2128820 2129713 R ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase complement(2128820..2129713) Listeria monocytogenes serotype 4b str. CLIP 80459 7703998 YP_002758760.1 CDS rpmF NC_012488.1 2129863 2130036 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(2129863..2130036) Listeria monocytogenes serotype 4b str. CLIP 80459 7703999 YP_002758761.1 CDS Lm4b_02069 NC_012488.1 2130127 2130663 R hypothetical protein complement(2130127..2130663) Listeria monocytogenes serotype 4b str. CLIP 80459 7702428 YP_002758762.1 CDS Lm4b_02070 NC_012488.1 2130793 2131965 D hypothetical protein 2130793..2131965 Listeria monocytogenes serotype 4b str. CLIP 80459 7704000 YP_002758763.1 CDS Lm4b_02071 NC_012488.1 2132047 2134287 D excinuclease ABC subunit A 2132047..2134287 Listeria monocytogenes serotype 4b str. CLIP 80459 7704001 YP_002758764.1 CDS Lm4b_02072 NC_012488.1 2134330 2135370 R protease complement(2134330..2135370) Listeria monocytogenes serotype 4b str. CLIP 80459 7704002 YP_002758765.1 CDS coaD NC_012488.1 2135389 2135871 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(2135389..2135871) Listeria monocytogenes serotype 4b str. CLIP 80459 7704003 YP_002758766.1 CDS Lm4b_02074 NC_012488.1 2135874 2136431 R hypothetical protein complement(2135874..2136431) Listeria monocytogenes serotype 4b str. CLIP 80459 7704004 YP_002758767.1 CDS Lm4b_02075 NC_012488.1 2136528 2136809 R hypothetical protein complement(2136528..2136809) Listeria monocytogenes serotype 4b str. CLIP 80459 7704005 YP_002758768.1 CDS Lm4b_02076 NC_012488.1 2136840 2137289 R hypothetical protein complement(2136840..2137289) Listeria monocytogenes serotype 4b str. CLIP 80459 7704006 YP_002758769.1 CDS Lm4b_02077 NC_012488.1 2137337 2138392 R hypothetical protein complement(2137337..2138392) Listeria monocytogenes serotype 4b str. CLIP 80459 7704007 YP_002758770.1 CDS ctaB NC_012488.1 2138540 2139445 R converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase complement(2138540..2139445) Listeria monocytogenes serotype 4b str. CLIP 80459 7704008 YP_002758771.1 CDS ctaA NC_012488.1 2139681 2140598 D heme O oxygenase 2139681..2140598 Listeria monocytogenes serotype 4b str. CLIP 80459 7703263 YP_002758772.1 CDS Lm4b_02080 NC_012488.1 2140706 2141449 D potassium channel subunit 2140706..2141449 Listeria monocytogenes serotype 4b str. CLIP 80459 7703262 YP_002758773.1 CDS Lm4b_02081 NC_012488.1 2141455 2142096 R hypothetical protein complement(2141455..2142096) Listeria monocytogenes serotype 4b str. CLIP 80459 7704009 YP_002758774.1 CDS Lm4b_02082 NC_012488.1 2142115 2142732 R hypothetical protein complement(2142115..2142732) Listeria monocytogenes serotype 4b str. CLIP 80459 7704010 YP_002758775.1 CDS Lm4b_02083 NC_012488.1 2142745 2144370 R copper export protein complement(2142745..2144370) Listeria monocytogenes serotype 4b str. CLIP 80459 7702486 YP_002758776.1 CDS Lm4b_02084 NC_012488.1 2144510 2144701 D hypothetical protein 2144510..2144701 Listeria monocytogenes serotype 4b str. CLIP 80459 7703125 YP_002758777.1 CDS mscL NC_012488.1 2144763 2145149 D homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 2144763..2145149 Listeria monocytogenes serotype 4b str. CLIP 80459 7703126 YP_002758778.1 CDS Lm4b_02086 NC_012488.1 2145284 2145676 R hypothetical protein complement(2145284..2145676) Listeria monocytogenes serotype 4b str. CLIP 80459 7703127 YP_002758779.1 CDS Lm4b_02087 NC_012488.1 2145721 2145930 R hypothetical protein complement(2145721..2145930) Listeria monocytogenes serotype 4b str. CLIP 80459 7703128 YP_002758780.1 CDS Lm4b_02088 NC_012488.1 2146081 2147058 R conjugated bile acid hydrolase complement(2146081..2147058) Listeria monocytogenes serotype 4b str. CLIP 80459 7703129 YP_002758781.1 CDS groEL NC_012488.1 2147313 2148941 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL complement(2147313..2148941) Listeria monocytogenes serotype 4b str. CLIP 80459 7703130 YP_002758782.1 CDS groES NC_012488.1 2148975 2149259 R 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES complement(2148975..2149259) Listeria monocytogenes serotype 4b str. CLIP 80459 7702948 YP_002758783.1 CDS Lm4b_02091 NC_012488.1 2149494 2150180 D hypothetical protein 2149494..2150180 Listeria monocytogenes serotype 4b str. CLIP 80459 7702949 YP_002758784.1 CDS Lm4b_02092 NC_012488.1 2150182 2150379 D hypothetical protein 2150182..2150379 Listeria monocytogenes serotype 4b str. CLIP 80459 7703131 YP_002758785.1 CDS Lm4b_02093 NC_012488.1 2150413 2151060 R modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex complement(2150413..2151060) Listeria monocytogenes serotype 4b str. CLIP 80459 7703132 YP_002758786.1 CDS Lm4b_02094 NC_012488.1 2151370 2153322 D ABC transporter ATP-binding protein 2151370..2153322 Listeria monocytogenes serotype 4b str. CLIP 80459 7703133 YP_002758787.1 CDS Lm4b_02095 NC_012488.1 2153347 2154306 D hypothetical protein 2153347..2154306 Listeria monocytogenes serotype 4b str. CLIP 80459 7703134 YP_002758788.1 CDS Lm4b_02096 NC_012488.1 2154851 2155885 R in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease complement(2154851..2155885) Listeria monocytogenes serotype 4b str. CLIP 80459 7703135 YP_002758789.1 CDS Lm4b_02097 NC_012488.1 2155870 2156325 R ribosomal protein alanine acetyltransferase complement(2155870..2156325) Listeria monocytogenes serotype 4b str. CLIP 80459 7703136 YP_002758790.1 CDS Lm4b_02098 NC_012488.1 2156322 2157014 R glycoprotease complement(2156322..2157014) Listeria monocytogenes serotype 4b str. CLIP 80459 7703137 YP_002758791.1 CDS Lm4b_02099 NC_012488.1 2157011 2157472 R hypothetical protein complement(2157011..2157472) Listeria monocytogenes serotype 4b str. CLIP 80459 7703138 YP_002758792.1 CDS Lm4b_02100 NC_012488.1 2157577 2158719 R hypothetical protein complement(2157577..2158719) Listeria monocytogenes serotype 4b str. CLIP 80459 7703139 YP_002758793.1 CDS Lm4b_02101 NC_012488.1 2158856 2159236 R hypothetical protein complement(2158856..2159236) Listeria monocytogenes serotype 4b str. CLIP 80459 7703140 YP_002758794.1 CDS Lm4b_02102 NC_012488.1 2159331 2159687 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(2159331..2159687) Listeria monocytogenes serotype 4b str. CLIP 80459 7703141 YP_002758795.1 CDS Lm4b_02103 NC_012488.1 2159677 2160066 R may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB complement(2159677..2160066) Listeria monocytogenes serotype 4b str. CLIP 80459 7703142 YP_002758796.1 CDS Lm4b_02104 NC_012488.1 2160172 2160798 R hypothetical protein complement(2160172..2160798) Listeria monocytogenes serotype 4b str. CLIP 80459 7703143 YP_002758797.1 CDS Lm4b_02105 NC_012488.1 2160795 2161688 R hypothetical protein complement(2160795..2161688) Listeria monocytogenes serotype 4b str. CLIP 80459 7703144 YP_002758798.1 CDS Lm4b_02106 NC_012488.1 2161956 2163644 R peptidoglycan bound protein (LPXTG motif) complement(2161956..2163644) Listeria monocytogenes serotype 4b str. CLIP 80459 7704326 YP_002758799.1 CDS Lm4b_02107 NC_012488.1 2163741 2165012 R transcription regulator complement(2163741..2165012) Listeria monocytogenes serotype 4b str. CLIP 80459 7703146 YP_002758800.1 CDS Lm4b_02108 NC_012488.1 2165648 2166979 R hypothetical protein complement(2165648..2166979) Listeria monocytogenes serotype 4b str. CLIP 80459 7703147 YP_002758801.1 CDS Lm4b_02109 NC_012488.1 2166989 2167579 R transcription regulator complement(2166989..2167579) Listeria monocytogenes serotype 4b str. CLIP 80459 7703148 YP_002758802.1 CDS Lm4b_02110 NC_012488.1 2167690 2168733 R lipase complement(2167690..2168733) Listeria monocytogenes serotype 4b str. CLIP 80459 7703149 YP_002758803.1 CDS argG NC_012488.1 2168948 2170162 D catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 2168948..2170162 Listeria monocytogenes serotype 4b str. CLIP 80459 7703150 YP_002758804.1 CDS argH NC_012488.1 2170166 2171536 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 2170166..2171536 Listeria monocytogenes serotype 4b str. CLIP 80459 7704373 YP_002758805.1 CDS betL NC_012488.1 2171704 2173227 D glycine betaine transporter BetL 2171704..2173227 Listeria monocytogenes serotype 4b str. CLIP 80459 7704374 YP_002758806.1 CDS Lm4b_02115 NC_012488.1 2173472 2174122 R hypothetical protein complement(2173472..2174122) Listeria monocytogenes serotype 4b str. CLIP 80459 7703216 YP_002758807.1 CDS Lm4b_02116 NC_012488.1 2174124 2175056 R 1-phosphofructokinase complement(2174124..2175056) Listeria monocytogenes serotype 4b str. CLIP 80459 7703151 YP_002758808.1 CDS Lm4b_02117 NC_012488.1 2175074 2176423 R PTS system galactitol-specific enzyme IIC component complement(2175074..2176423) Listeria monocytogenes serotype 4b str. CLIP 80459 7703152 YP_002758809.1 CDS Lm4b_02118 NC_012488.1 2176451 2176726 R PTS system galactitol-specific enzyme IIB component complement(2176451..2176726) Listeria monocytogenes serotype 4b str. CLIP 80459 7703153 YP_002758810.1 CDS Lm4b_02119 NC_012488.1 2176732 2177199 R PTS system galactitol-specific enzyme IIA component complement(2176732..2177199) Listeria monocytogenes serotype 4b str. CLIP 80459 7703154 YP_002758811.1 CDS Lm4b_02120 NC_012488.1 2177207 2179213 R transcription antiterminator complement(2177207..2179213) Listeria monocytogenes serotype 4b str. CLIP 80459 7703155 YP_002758812.1 CDS Lm4b_02121 NC_012488.1 2179394 2180839 R GntR family transcriptional regulator complement(2179394..2180839) Listeria monocytogenes serotype 4b str. CLIP 80459 7703156 YP_002758813.1 CDS Lm4b_02122 NC_012488.1 2180963 2181850 D with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS 2180963..2181850 Listeria monocytogenes serotype 4b str. CLIP 80459 7703157 YP_002758814.1 CDS Lm4b_02123 NC_012488.1 2181852 2182418 D with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT 2181852..2182418 Listeria monocytogenes serotype 4b str. CLIP 80459 7703158 YP_002758815.1 CDS eutD NC_012488.1 2182457 2183434 R in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase complement(2182457..2183434) Listeria monocytogenes serotype 4b str. CLIP 80459 7703159 YP_002758816.1 CDS Lm4b_02125 NC_012488.1 2183754 2183981 D hypothetical protein 2183754..2183981 Listeria monocytogenes serotype 4b str. CLIP 80459 7704075 YP_002758817.1 CDS Lm4b_02126 NC_012488.1 2183978 2185972 D ferrous iron transport protein B 2183978..2185972 Listeria monocytogenes serotype 4b str. CLIP 80459 7703160 YP_002758818.1 CDS Lm4b_02127 NC_012488.1 2185988 2186161 D hypothetical protein 2185988..2186161 Listeria monocytogenes serotype 4b str. CLIP 80459 7703161 YP_002758819.1 CDS Lm4b_02128 NC_012488.1 2186191 2187045 R hypothetical protein complement(2186191..2187045) Listeria monocytogenes serotype 4b str. CLIP 80459 7703162 YP_002758820.1 CDS Lm4b_02129 NC_012488.1 2187297 2188058 D transcriptional regulator (DeoR family) 2187297..2188058 Listeria monocytogenes serotype 4b str. CLIP 80459 7703163 YP_002758821.1 CDS Lm4b_02130 NC_012488.1 2188064 2189197 D N-acetylglucosamine-6-phosphate deacetylase 2188064..2189197 Listeria monocytogenes serotype 4b str. CLIP 80459 7703165 YP_002758822.1 CDS Lm4b_02131 NC_012488.1 2189239 2190048 D hydrolase 2189239..2190048 Listeria monocytogenes serotype 4b str. CLIP 80459 7703166 YP_002758823.1 CDS Lm4b_02132 NC_012488.1 2190154 2191110 R mannnose-6 phospate isomerase complement(2190154..2191110) Listeria monocytogenes serotype 4b str. CLIP 80459 7703167 YP_002758824.1 CDS Lm4b_02133 NC_012488.1 2191190 2191921 R FMN-containing NADPH-linked nitro/flavin reductase complement(2191190..2191921) Listeria monocytogenes serotype 4b str. CLIP 80459 7703168 YP_002758825.1 CDS Lm4b_02134 NC_012488.1 2192044 2192274 D hypothetical protein 2192044..2192274 Listeria monocytogenes serotype 4b str. CLIP 80459 7703169 YP_002758826.1 CDS Lm4b_02135 NC_012488.1 2192358 2193113 D putative heme peroxidase 2192358..2193113 Listeria monocytogenes serotype 4b str. CLIP 80459 7703170 YP_002758827.1 CDS Lm4b_02136 NC_012488.1 2193309 2194076 D ABC transporter ATP-binding protein 2193309..2194076 Listeria monocytogenes serotype 4b str. CLIP 80459 7703171 YP_002758828.1 CDS Lm4b_02137 NC_012488.1 2194063 2196003 D ABC transporter permease 2194063..2196003 Listeria monocytogenes serotype 4b str. CLIP 80459 7703172 YP_002758829.1 CDS Lm4b_02138 NC_012488.1 2196041 2196865 R hypothetical protein complement(2196041..2196865) Listeria monocytogenes serotype 4b str. CLIP 80459 7703174 YP_002758830.1 CDS Lm4b_02139 NC_012488.1 2196926 2197387 D hypothetical protein 2196926..2197387 Listeria monocytogenes serotype 4b str. CLIP 80459 7703175 YP_002758831.1 CDS glmM NC_012488.1 2197422 2198774 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(2197422..2198774) Listeria monocytogenes serotype 4b str. CLIP 80459 7703176 YP_002758832.1 CDS Lm4b_02141 NC_012488.1 2199024 2200382 R hypothetical protein complement(2199024..2200382) Listeria monocytogenes serotype 4b str. CLIP 80459 7703177 YP_002758833.1 CDS Lm4b_02143 NC_012488.1 2200382 2201203 R hypothetical protein complement(2200382..2201203) Listeria monocytogenes serotype 4b str. CLIP 80459 7703178 YP_002758834.1 CDS Lm4b_02144 NC_012488.1 2201358 2202653 R protein possibly involved in teichoic acid biosynthesis complement(2201358..2202653) Listeria monocytogenes serotype 4b str. CLIP 80459 7703179 YP_002758835.1 CDS Lm4b_02145 NC_012488.1 2202782 2205043 R maltose phosphorylase complement(2202782..2205043) Listeria monocytogenes serotype 4b str. CLIP 80459 7703180 YP_002758836.1 CDS Lm4b_02146 NC_012488.1 2205059 2205892 R maltodextrose utilization protein MalA complement(2205059..2205892) Listeria monocytogenes serotype 4b str. CLIP 80459 7703181 YP_002758837.1 CDS Lm4b_02147b NC_012488.1 2205920 2206771 R maltodextrin ABC-transport system (permease) complement(2205920..2206771) Listeria monocytogenes serotype 4b str. CLIP 80459 7703182 YP_002758838.1 CDS Lm4b_02148 NC_012488.1 2206772 2208079 R maltodextrin ABC-transport system (permease) complement(2206772..2208079) Listeria monocytogenes serotype 4b str. CLIP 80459 7703183 YP_002758839.1 CDS Lm4b_02149 NC_012488.1 2208167 2209426 R maltose/maltodextrin ABC-transporter (binding protein) complement(2208167..2209426) Listeria monocytogenes serotype 4b str. CLIP 80459 7703184 YP_002758840.1 CDS Lm4b_02150 NC_012488.1 2209638 2211413 R maltogenic amylase complement(2209638..2211413) Listeria monocytogenes serotype 4b str. CLIP 80459 7703186 YP_002758841.1 CDS Lm4b_02151 NC_012488.1 2211671 2212306 D hypothetical protein 2211671..2212306 Listeria monocytogenes serotype 4b str. CLIP 80459 7703187 YP_002758842.1 CDS Lm4b_02152 NC_012488.1 2212342 2213307 R transcription regulator, LacI family complement(2212342..2213307) Listeria monocytogenes serotype 4b str. CLIP 80459 7703188 YP_002758843.1 CDS Lm4b_02153 NC_012488.1 2213446 2213682 R hypothetical protein complement(2213446..2213682) Listeria monocytogenes serotype 4b str. CLIP 80459 7703189 YP_002758844.1 CDS Lm4b_02154 NC_012488.1 2214281 2216104 R hypothetical protein complement(2214281..2216104) Listeria monocytogenes serotype 4b str. CLIP 80459 7703190 YP_002758845.1 CDS Lm4b_02155 NC_012488.1 2217113 2217802 R hypothetical protein complement(2217113..2217802) Listeria monocytogenes serotype 4b str. CLIP 80459 7704331 YP_002758846.1 CDS Lm4b_02156 NC_012488.1 2218281 2218991 D hypothetical protein 2218281..2218991 Listeria monocytogenes serotype 4b str. CLIP 80459 7703192 YP_002758847.1 CDS Lm4b_02157 NC_012488.1 2219021 2219920 R hypothetical protein complement(2219021..2219920) Listeria monocytogenes serotype 4b str. CLIP 80459 7703193 YP_002758848.1 CDS Lm4b_02158 NC_012488.1 2219937 2220791 R fructose-1,6-biphosphate aldolase type II complement(2219937..2220791) Listeria monocytogenes serotype 4b str. CLIP 80459 7703194 YP_002758849.1 CDS Lm4b_02159 NC_012488.1 2220809 2221906 R PTS system, fructose-specific enzyme IIC component complement(2220809..2221906) Listeria monocytogenes serotype 4b str. CLIP 80459 7703195 YP_002758850.1 CDS Lm4b_02160 NC_012488.1 2221920 2222231 R PTS system, fructose-specific enzyme IIB component complement(2221920..2222231) Listeria monocytogenes serotype 4b str. CLIP 80459 7703196 YP_002758851.1 CDS Lm4b_02161 NC_012488.1 2222244 2222717 R PTS system, fructose-specific enzyme IIA component complement(2222244..2222717) Listeria monocytogenes serotype 4b str. CLIP 80459 7703197 YP_002758852.1 CDS Lm4b_02162 NC_012488.1 2222729 2224186 R transcription regulator complement(2222729..2224186) Listeria monocytogenes serotype 4b str. CLIP 80459 7703198 YP_002758853.1 CDS Lm4b_02163 NC_012488.1 2224382 2225284 D ABC transporter ATP-binding protein 2224382..2225284 Listeria monocytogenes serotype 4b str. CLIP 80459 7703199 YP_002758854.1 CDS Lm4b_02164 NC_012488.1 2225277 2226512 D ABC transporter permease 2225277..2226512 Listeria monocytogenes serotype 4b str. CLIP 80459 7703200 YP_002758855.1 CDS Lm4b_02165 NC_012488.1 2226529 2227002 D hypothetical protein 2226529..2227002 Listeria monocytogenes serotype 4b str. CLIP 80459 7703201 YP_002758856.1 CDS Lm4b_02167 NC_012488.1 2227592 2228257 R hypothetical protein complement(2227592..2228257) Listeria monocytogenes serotype 4b str. CLIP 80459 7703202 YP_002758857.1 CDS Lm4b_02168 NC_012488.1 2228471 2230213 D mannose-6-phosphate isomerase 2228471..2230213 Listeria monocytogenes serotype 4b str. CLIP 80459 7703203 YP_002758858.1 CDS Lm4b_02169 NC_012488.1 2230252 2230986 R GntR family transcriptional regulator complement(2230252..2230986) Listeria monocytogenes serotype 4b str. CLIP 80459 7703204 YP_002758859.1 CDS Lm4b_02170 NC_012488.1 2231101 2232117 R hypothetical protein complement(2231101..2232117) Listeria monocytogenes serotype 4b str. CLIP 80459 7703205 YP_002758860.1 CDS Lm4b_02171 NC_012488.1 2232186 2233040 R LysR family transcriptional regulator complement(2232186..2233040) Listeria monocytogenes serotype 4b str. CLIP 80459 7702800 YP_002758861.1 CDS Lm4b_02172 NC_012488.1 2233146 2234153 D hypothetical protein 2233146..2234153 Listeria monocytogenes serotype 4b str. CLIP 80459 7702801 YP_002758862.1 CDS Lm4b_02173 NC_012488.1 2234209 2234850 D hypothetical protein 2234209..2234850 Listeria monocytogenes serotype 4b str. CLIP 80459 7702802 YP_002758863.1 CDS Lm4b_02174 NC_012488.1 2234900 2235217 R hypothetical protein complement(2234900..2235217) Listeria monocytogenes serotype 4b str. CLIP 80459 7702803 YP_002758864.1 CDS Lm4b_02175 NC_012488.1 2235416 2235592 D hypothetical protein 2235416..2235592 Listeria monocytogenes serotype 4b str. CLIP 80459 7702804 YP_002758865.1 CDS Lm4b_02176 NC_012488.1 2235635 2235934 R hypothetical protein complement(2235635..2235934) Listeria monocytogenes serotype 4b str. CLIP 80459 7702805 YP_002758866.1 CDS Lm4b_02177 NC_012488.1 2236040 2236366 R thioredoxin complement(2236040..2236366) Listeria monocytogenes serotype 4b str. CLIP 80459 7702806 YP_002758867.1 CDS Lm4b_02178 NC_012488.1 2236363 2236800 R An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin complement(2236363..2236800) Listeria monocytogenes serotype 4b str. CLIP 80459 7702807 YP_002758868.1 CDS nrdF NC_012488.1 2236797 2237846 R B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta complement(2236797..2237846) Listeria monocytogenes serotype 4b str. CLIP 80459 7702808 YP_002758869.1 CDS Lm4b_02180 NC_012488.1 2237902 2240193 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(2237902..2240193) Listeria monocytogenes serotype 4b str. CLIP 80459 7702809 YP_002758870.1 CDS Lm4b_02181 NC_012488.1 2240729 2241070 D hypothetical protein 2240729..2241070 Listeria monocytogenes serotype 4b str. CLIP 80459 7702810 YP_002758871.1 CDS sepA NC_012488.1 2241124 2243025 R hypothetical protein complement(2241124..2243025) Listeria monocytogenes serotype 4b str. CLIP 80459 7702811 YP_002758872.1 CDS Lm4b_02183 NC_012488.1 2243156 2243341 R YwmG protein complement(2243156..2243341) Listeria monocytogenes serotype 4b str. CLIP 80459 7701582 YP_002758873.1 CDS Lm4b_02184 NC_012488.1 2243435 2244484 R oxidoreductase complement(2243435..2244484) Listeria monocytogenes serotype 4b str. CLIP 80459 7702812 YP_002758874.1 CDS Lm4b_02185 NC_012488.1 2244507 2245475 R hypothetical protein complement(2244507..2245475) Listeria monocytogenes serotype 4b str. CLIP 80459 7702813 YP_002758875.1 CDS Lm4b_02186 NC_012488.1 2245478 2246200 R hypothetical protein complement(2245478..2246200) Listeria monocytogenes serotype 4b str. CLIP 80459 7702814 YP_002758876.1 CDS Lm4b_02187 NC_012488.1 2246202 2246942 R hypothetical protein complement(2246202..2246942) Listeria monocytogenes serotype 4b str. CLIP 80459 7702815 YP_002758877.1 CDS Lm4b_02188 NC_012488.1 2246958 2248034 R oxidoreductase complement(2246958..2248034) Listeria monocytogenes serotype 4b str. CLIP 80459 7702816 YP_002758878.1 CDS Lm4b_02189 NC_012488.1 2248109 2248987 R AraC family transcriptional regulator complement(2248109..2248987) Listeria monocytogenes serotype 4b str. CLIP 80459 7702817 YP_002758879.1 CDS Lm4b_02190 NC_012488.1 2249057 2249752 R transcription regulator CRP/FNR family complement(2249057..2249752) Listeria monocytogenes serotype 4b str. CLIP 80459 7702818 YP_002758880.1 CDS Lm4b_02191 NC_012488.1 2250005 2250676 R hypothetical protein complement(2250005..2250676) Listeria monocytogenes serotype 4b str. CLIP 80459 7702819 YP_002758881.1 CDS Lm4b_02192 NC_012488.1 2250741 2251358 R hypothetical protein complement(2250741..2251358) Listeria monocytogenes serotype 4b str. CLIP 80459 7702820 YP_002758882.1 CDS Lm4b_02193 NC_012488.1 2251489 2251878 D glyoxalase I 2251489..2251878 Listeria monocytogenes serotype 4b str. CLIP 80459 7702821 YP_002758883.1 CDS Lm4b_02194 NC_012488.1 2251901 2252059 D hypothetical protein 2251901..2252059 Listeria monocytogenes serotype 4b str. CLIP 80459 7702822 YP_002758884.1 CDS Lm4b_02195 NC_012488.1 2252105 2253034 R hypothetical protein complement(2252105..2253034) Listeria monocytogenes serotype 4b str. CLIP 80459 7702823 YP_002758885.1 CDS Lm4b_02196 NC_012488.1 2253056 2254279 R antiporter protein complement(2253056..2254279) Listeria monocytogenes serotype 4b str. CLIP 80459 7702824 YP_002758886.1 CDS Lm4b_02197 NC_012488.1 2254276 2255859 R propionate CoA-transferase complement(2254276..2255859) Listeria monocytogenes serotype 4b str. CLIP 80459 7702825 YP_002758887.1 CDS Lm4b_02198 NC_012488.1 2256089 2257456 R sigma-54-dependent transcriptional activator complement(2256089..2257456) Listeria monocytogenes serotype 4b str. CLIP 80459 7702826 YP_002758888.1 CDS Lm4b_02199 NC_012488.1 2257562 2258635 R hypothetical protein complement(2257562..2258635) Listeria monocytogenes serotype 4b str. CLIP 80459 7702827 YP_002758889.1 CDS fabG NC_012488.1 2258814 2259575 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(2258814..2259575) Listeria monocytogenes serotype 4b str. CLIP 80459 7702828 YP_002758890.1 CDS Lm4b_02201 NC_012488.1 2259759 2260322 D TetR family transcriptional regulator 2259759..2260322 Listeria monocytogenes serotype 4b str. CLIP 80459 7702829 YP_002758891.1 CDS Lm4b_02202 NC_012488.1 2260428 2260775 D hypothetical protein 2260428..2260775 Listeria monocytogenes serotype 4b str. CLIP 80459 7702830 YP_002758892.1 CDS Lm4b_02203 NC_012488.1 2260816 2265126 R cell surface protein (LPXTG motif) complement(2260816..2265126) Listeria monocytogenes serotype 4b str. CLIP 80459 7702831 YP_002758893.1 CDS Lm4b_02204 NC_012488.1 2265395 2270539 R peptidoglycan bound protein (LPXTG motif) complement(2265395..2270539) Listeria monocytogenes serotype 4b str. CLIP 80459 7702832 YP_002758894.1 CDS Lm4b_02205 NC_012488.1 2270720 2274175 R peptidoglycan bound protein (LPXTG motif) complement(2270720..2274175) Listeria monocytogenes serotype 4b str. CLIP 80459 7702833 YP_002758895.1 CDS Lm4b_02206 NC_012488.1 2274368 2274844 R hypothetical protein complement(2274368..2274844) Listeria monocytogenes serotype 4b str. CLIP 80459 7702834 YP_002758896.1 CDS Lm4b_02207 NC_012488.1 2274905 2275645 R hypothetical protein complement(2274905..2275645) Listeria monocytogenes serotype 4b str. CLIP 80459 7702835 YP_002758897.1 CDS Lm4b_02208 NC_012488.1 2275649 2276428 R ferrichrome ABC transporter (ATP-binding protein) complement(2275649..2276428) Listeria monocytogenes serotype 4b str. CLIP 80459 7702836 YP_002758898.1 CDS Lm4b_02209 NC_012488.1 2276409 2277398 R ferrichrome ABC transporter (permease) complement(2276409..2277398) Listeria monocytogenes serotype 4b str. CLIP 80459 7702837 YP_002758899.1 CDS Lm4b_02210 NC_012488.1 2277388 2278260 R ferrichrome ABC transporter (binding protein) complement(2277388..2278260) Listeria monocytogenes serotype 4b str. CLIP 80459 7702838 YP_002758900.1 CDS Lm4b_02211 NC_012488.1 2278347 2280056 R hypothetical protein complement(2278347..2280056) Listeria monocytogenes serotype 4b str. CLIP 80459 7702839 YP_002758901.1 CDS Lm4b_02213 NC_012488.1 2280069 2280695 R hypothetical protein complement(2280069..2280695) Listeria monocytogenes serotype 4b str. CLIP 80459 7702840 YP_002758902.1 CDS Lm4b_02214 NC_012488.1 2280906 2281166 R hypothetical protein complement(2280906..2281166) Listeria monocytogenes serotype 4b str. CLIP 80459 7702841 YP_002758903.1 CDS Lm4b_02215 NC_012488.1 2281465 2283270 R oligoendopeptidase complement(2281465..2283270) Listeria monocytogenes serotype 4b str. CLIP 80459 7702842 YP_002758904.1 CDS Lm4b_02216 NC_012488.1 2283343 2284458 R competence protein complement(2283343..2284458) Listeria monocytogenes serotype 4b str. CLIP 80459 7702843 YP_002758905.1 CDS mecA NC_012488.1 2284584 2285237 R enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence; adaptor protein complement(2284584..2285237) Listeria monocytogenes serotype 4b str. CLIP 80459 7702844 YP_002758906.1 CDS spxA NC_012488.1 2285469 2285864 R the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters; in Bacillus subtilis this protein is a substrate for ClpXP protease; blocks transcription of the competence regulatory gene encoded by the srf operon; regulates a number of genes involved in thiol homeostasis including trxA and trxB; monomeric member of ArsC family of proteins; does not bind DNA; contains a disulfide bond between C10 and C13 which may sense disulfide stress; transcriptional regulator Spx complement(2285469..2285864) Listeria monocytogenes serotype 4b str. CLIP 80459 7702546 YP_002758907.1 CDS Lm4b_02219 NC_012488.1 2286184 2287152 R oligopeptide ABC transporter (ATP-binding protein) complement(2286184..2287152) Listeria monocytogenes serotype 4b str. CLIP 80459 7702845 YP_002758908.1 CDS Lm4b_02220 NC_012488.1 2287149 2288225 R oligopeptide ABC transporter (ATP-binding protein) complement(2287149..2288225) Listeria monocytogenes serotype 4b str. CLIP 80459 7702846 YP_002758909.1 CDS Lm4b_02221 NC_012488.1 2288243 2289277 R oligopeptide ABC transporter (permease) complement(2288243..2289277) Listeria monocytogenes serotype 4b str. CLIP 80459 7702847 YP_002758910.1 CDS Lm4b_02222 NC_012488.1 2289277 2290206 R oligopeptide ABC transporter (permease) complement(2289277..2290206) Listeria monocytogenes serotype 4b str. CLIP 80459 7702848 YP_002758911.1 CDS Lm4b_02223 NC_012488.1 2290485 2292161 R pheromone ABC transporter (binding protein) complement(2290485..2292161) Listeria monocytogenes serotype 4b str. CLIP 80459 7702849 YP_002758912.1 CDS Lm4b_02224 NC_012488.1 2292785 2293129 D hypothetical protein 2292785..2293129 Listeria monocytogenes serotype 4b str. CLIP 80459 7702850 YP_002758913.1 CDS trpS NC_012488.1 2293464 2294459 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 2293464..2294459 Listeria monocytogenes serotype 4b str. CLIP 80459 7702851 YP_002758914.1 CDS Lm4b_02226 NC_012488.1 2294515 2294931 R organic hydroperoxide resistance protein (OhrA) complement(2294515..2294931) Listeria monocytogenes serotype 4b str. CLIP 80459 7701615 YP_002758915.1 CDS Lm4b_02227 NC_012488.1 2294915 2295367 R transcription regulator complement(2294915..2295367) Listeria monocytogenes serotype 4b str. CLIP 80459 7702852 YP_002758916.1 CDS Lm4b_02228 NC_012488.1 2295489 2296730 R 3-oxoacyl-ACP synthase complement(2295489..2296730) Listeria monocytogenes serotype 4b str. CLIP 80459 7702853 YP_002758917.1 CDS Lm4b_02229 NC_012488.1 2296933 2297871 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III complement(2296933..2297871) Listeria monocytogenes serotype 4b str. CLIP 80459 7702854 YP_002758918.1 CDS Lm4b_02230 NC_012488.1 2297991 2299094 R N-acetylmuramoyl-L-alanine amidase complement(2297991..2299094) Listeria monocytogenes serotype 4b str. CLIP 80459 7702855 YP_002758919.1 CDS Lm4b_02231 NC_012488.1 2299450 2299629 D hypothetical protein 2299450..2299629 Listeria monocytogenes serotype 4b str. CLIP 80459 7702856 YP_002758920.1 CDS Lm4b_02232 NC_012488.1 2299719 2300408 R phosphoglyceromutase 1 complement(2299719..2300408) Listeria monocytogenes serotype 4b str. CLIP 80459 7702857 YP_002758921.1 CDS clpB NC_012488.1 2300499 2303099 R endopeptidase Clp ATP-binding chain B (ClpB) complement(2300499..2303099) Listeria monocytogenes serotype 4b str. CLIP 80459 7702858 YP_002758922.1 CDS Lm4b_02234 NC_012488.1 2303247 2303930 R hypothetical protein complement(2303247..2303930) Listeria monocytogenes serotype 4b str. CLIP 80459 7703239 YP_002758923.1 CDS Lm4b_02235 NC_012488.1 2304036 2304806 R hypothetical protein complement(2304036..2304806) Listeria monocytogenes serotype 4b str. CLIP 80459 7702859 YP_002758924.1 CDS Lm4b_02236 NC_012488.1 2304870 2305655 R hypothetical protein complement(2304870..2305655) Listeria monocytogenes serotype 4b str. CLIP 80459 7702860 YP_002758925.1 CDS Lm4b_02237 NC_012488.1 2305776 2306120 R hypothetical protein complement(2305776..2306120) Listeria monocytogenes serotype 4b str. CLIP 80459 7702861 YP_002758926.1 CDS Lm4b_02238b NC_012488.1 2306277 2307206 R protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase complement(2306277..2307206) Listeria monocytogenes serotype 4b str. CLIP 80459 7702862 YP_002758927.1 CDS hemE NC_012488.1 2307203 2308264 R catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase complement(2307203..2308264) Listeria monocytogenes serotype 4b str. CLIP 80459 7702863 YP_002758928.1 CDS Lm4b_02240 NC_012488.1 2308461 2308964 D hypothetical protein 2308461..2308964 Listeria monocytogenes serotype 4b str. CLIP 80459 7702864 YP_002758929.1 CDS Lm4b_02241 NC_012488.1 2309003 2310226 R ABC transporter permease complement(2309003..2310226) Listeria monocytogenes serotype 4b str. CLIP 80459 7702865 YP_002758930.1 CDS Lm4b_02242 NC_012488.1 2310210 2310962 R ABC transporter ATP-binding protein complement(2310210..2310962) Listeria monocytogenes serotype 4b str. CLIP 80459 7702866 YP_002758931.1 CDS Lm4b_02243 NC_012488.1 2311123 2311545 D histidine triad (HIT) protein 2311123..2311545 Listeria monocytogenes serotype 4b str. CLIP 80459 7702867 YP_002758932.1 CDS Lm4b_02244 NC_012488.1 2311575 2311937 D hypothetical protein 2311575..2311937 Listeria monocytogenes serotype 4b str. CLIP 80459 7702868 YP_002758933.1 CDS Lm4b_02245 NC_012488.1 2312120 2312659 D hypothetical protein 2312120..2312659 Listeria monocytogenes serotype 4b str. CLIP 80459 7702869 YP_002758934.1 CDS Lm4b_02246 NC_012488.1 2312776 2313657 D post-translocation molecular chaperone 2312776..2313657 Listeria monocytogenes serotype 4b str. CLIP 80459 7702870 YP_002758935.1 CDS Lm4b_02247 NC_012488.1 2313697 2314638 R catalyzes the exonucleic cleavage of mRNA yielding nucleioside 5'-phosphates; 3'-5' exoribonuclease YhaM complement(2313697..2314638) Listeria monocytogenes serotype 4b str. CLIP 80459 7702871 YP_002758936.1 CDS Lm4b_02248 NC_012488.1 2314683 2317406 R hypothetical protein complement(2314683..2317406) Listeria monocytogenes serotype 4b str. CLIP 80459 7702872 YP_002758937.1 CDS Lm4b_02249 NC_012488.1 2317403 2318638 R hypothetical protein complement(2317403..2318638) Listeria monocytogenes serotype 4b str. CLIP 80459 7702873 YP_002758938.1 CDS Lm4b_02250 NC_012488.1 2318781 2319134 R hypothetical protein complement(2318781..2319134) Listeria monocytogenes serotype 4b str. CLIP 80459 7702874 YP_002758939.1 CDS Lm4b_02251 NC_012488.1 2319216 2320349 R hypothetical protein complement(2319216..2320349) Listeria monocytogenes serotype 4b str. CLIP 80459 7702875 YP_002758940.1 CDS fumC NC_012488.1 2320453 2321820 R class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase complement(2320453..2321820) Listeria monocytogenes serotype 4b str. CLIP 80459 7702876 YP_002758941.1 CDS Lm4b_02253 NC_012488.1 2321890 2322684 R hypothetical protein complement(2321890..2322684) Listeria monocytogenes serotype 4b str. CLIP 80459 7703237 YP_002758942.1 CDS Lm4b_02254 NC_012488.1 2322681 2323586 R ABC transporter ATP-binding protein complement(2322681..2323586) Listeria monocytogenes serotype 4b str. CLIP 80459 7702877 YP_002758943.1 CDS Lm4b_02255 NC_012488.1 2323586 2323783 R hypothetical protein complement(2323586..2323783) Listeria monocytogenes serotype 4b str. CLIP 80459 7702878 YP_002758944.1 CDS Lm4b_02256 NC_012488.1 2323893 2326037 R penicillin-binding protein complement(2323893..2326037) Listeria monocytogenes serotype 4b str. CLIP 80459 7702879 YP_002758945.1 CDS Lm4b_02257 NC_012488.1 2326360 2326785 D arsenate reductase 2326360..2326785 Listeria monocytogenes serotype 4b str. CLIP 80459 7702880 YP_002758946.1 CDS Lm4b_02258 NC_012488.1 2326849 2327718 D hypothetical protein 2326849..2327718 Listeria monocytogenes serotype 4b str. CLIP 80459 7702403 YP_002758947.1 CDS Lm4b_02259 NC_012488.1 2327974 2329278 D hypothetical protein 2327974..2329278 Listeria monocytogenes serotype 4b str. CLIP 80459 7703527 YP_002758948.1 CDS Lm4b_02260 NC_012488.1 2329319 2330197 R LysR family transcriptional regulator complement(2329319..2330197) Listeria monocytogenes serotype 4b str. CLIP 80459 7703528 YP_002758949.1 CDS Lm4b_02261 NC_012488.1 2330498 2331352 D hypothetical protein 2330498..2331352 Listeria monocytogenes serotype 4b str. CLIP 80459 7703529 YP_002758950.1 CDS Lm4b_02262 NC_012488.1 2331421 2333346 D NADH oxidase 2331421..2333346 Listeria monocytogenes serotype 4b str. CLIP 80459 7703530 YP_002758951.1 CDS Lm4b_02263 NC_012488.1 2333405 2334274 D catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 2333405..2334274 Listeria monocytogenes serotype 4b str. CLIP 80459 7703531 YP_002758952.1 CDS Lm4b_02264 NC_012488.1 2334307 2335515 D transport system permease protein 2334307..2335515 Listeria monocytogenes serotype 4b str. CLIP 80459 7703532 YP_002758953.1 CDS Lm4b_02265 NC_012488.1 2335675 2336865 D transport system permease protein 2335675..2336865 Listeria monocytogenes serotype 4b str. CLIP 80459 7703533 YP_002758954.1 CDS Lm4b_02266 NC_012488.1 2336904 2337968 R hypothetical protein complement(2336904..2337968) Listeria monocytogenes serotype 4b str. CLIP 80459 7703534 YP_002758955.1 CDS Lm4b_02267b NC_012488.1 2337965 2338843 R ABC transporter ATP-binding protein complement(2337965..2338843) Listeria monocytogenes serotype 4b str. CLIP 80459 7703535 YP_002758956.1 CDS Lm4b_02268 NC_012488.1 2338833 2339228 R GntR family transcriptional regulator complement(2338833..2339228) Listeria monocytogenes serotype 4b str. CLIP 80459 7703536 YP_002758957.1 CDS Lm4b_02269 NC_012488.1 2339320 2339802 R O6-methylguanine-DNA methyltransferase complement(2339320..2339802) Listeria monocytogenes serotype 4b str. CLIP 80459 7703537 YP_002758958.1 CDS Lm4b_02270 NC_012488.1 2339948 2340508 D methylphosphotriester-DNA alkyltransferase and transcriptional regulator 2339948..2340508 Listeria monocytogenes serotype 4b str. CLIP 80459 7703539 YP_002758959.1 CDS Lm4b_02271 NC_012488.1 2340530 2341399 D ribosomal large subunit pseudouridine synthase 2340530..2341399 Listeria monocytogenes serotype 4b str. CLIP 80459 7703540 YP_002758960.1 CDS Lm4b_02272 NC_012488.1 2341412 2341804 R hypothetical protein complement(2341412..2341804) Listeria monocytogenes serotype 4b str. CLIP 80459 7703541 YP_002758961.1 CDS Lm4b_02273 NC_012488.1 2341806 2342462 R hypothetical protein complement(2341806..2342462) Listeria monocytogenes serotype 4b str. CLIP 80459 7703542 YP_002758962.1 CDS Lm4b_02274 NC_012488.1 2342459 2343343 R oxidoreductase complement(2342459..2343343) Listeria monocytogenes serotype 4b str. CLIP 80459 7703543 YP_002758963.1 CDS Lm4b_02275 NC_012488.1 2343730 2344350 D hypothetical protein 2343730..2344350 Listeria monocytogenes serotype 4b str. CLIP 80459 7703544 YP_002758964.1 CDS Lm4b_02276 NC_012488.1 2344364 2345362 D low-affinity inorganic phosphate transporter 2344364..2345362 Listeria monocytogenes serotype 4b str. CLIP 80459 7703545 YP_002758965.1 CDS arpJ NC_012488.1 2345554 2347014 D amino acid ABC transporter permease 2345554..2347014 Listeria monocytogenes serotype 4b str. CLIP 80459 7703546 YP_002758966.1 CDS Lm4b_02278 NC_012488.1 2347007 2347732 D amino acid ABC transporter (ATP-binding protein) 2347007..2347732 Listeria monocytogenes serotype 4b str. CLIP 80459 7704381 YP_002758967.1 CDS Lm4b_02279 NC_012488.1 2347805 2348956 D catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 2347805..2348956 Listeria monocytogenes serotype 4b str. CLIP 80459 7703547 YP_002758968.1 CDS Lm4b_02280 NC_012488.1 2349000 2349629 R phosphoglucomutase complement(2349000..2349629) Listeria monocytogenes serotype 4b str. CLIP 80459 7703548 YP_002758969.1 CDS Lm4b_02281 NC_012488.1 2349802 2351094 D hypothetical protein 2349802..2351094 Listeria monocytogenes serotype 4b str. CLIP 80459 7703549 YP_002758970.1 CDS Lm4b_02282 NC_012488.1 2351207 2351473 D hypothetical protein 2351207..2351473 Listeria monocytogenes serotype 4b str. CLIP 80459 7703550 YP_002758971.1 CDS Lm4b_02283 NC_012488.1 2351516 2352037 R intracellular protease complement(2351516..2352037) Listeria monocytogenes serotype 4b str. CLIP 80459 7703551 YP_002758972.1 CDS Lm4b_02284 NC_012488.1 2352201 2352545 R hypothetical protein complement(2352201..2352545) Listeria monocytogenes serotype 4b str. CLIP 80459 7703552 YP_002758973.1 CDS Lm4b_02285 NC_012488.1 2352542 2352733 R hypothetical protein complement(2352542..2352733) Listeria monocytogenes serotype 4b str. CLIP 80459 7703554 YP_002758974.1 CDS Lm4b_02286 NC_012488.1 2352884 2353234 D phosphotransferase system (PTS) beta-glucoside-specific enzyme IIA 2352884..2353234 Listeria monocytogenes serotype 4b str. CLIP 80459 7703555 YP_002758975.1 CDS Lm4b_02287 NC_012488.1 2353225 2354100 R hypothetical protein complement(2353225..2354100) Listeria monocytogenes serotype 4b str. CLIP 80459 7703556 YP_002758976.1 CDS Lm4b_02288 NC_012488.1 2354180 2354488 R hypothetical protein complement(2354180..2354488) Listeria monocytogenes serotype 4b str. CLIP 80459 7703557 YP_002758977.1 CDS Lm4b_02289 NC_012488.1 2354553 2355305 R hypothetical protein complement(2354553..2355305) Listeria monocytogenes serotype 4b str. CLIP 80459 7703558 YP_002758978.1 CDS Lm4b_02290 NC_012488.1 2355424 2356269 D hypothetical protein 2355424..2356269 Listeria monocytogenes serotype 4b str. CLIP 80459 7703559 YP_002758979.1 CDS Lm4b_02291 NC_012488.1 2356347 2357249 R hypothetical protein complement(2356347..2357249) Listeria monocytogenes serotype 4b str. CLIP 80459 7703560 YP_002758980.1 CDS Lm4b_02292 NC_012488.1 2357333 2357695 R hypothetical protein complement(2357333..2357695) Listeria monocytogenes serotype 4b str. CLIP 80459 7703561 YP_002758981.1 CDS Lm4b_02293 NC_012488.1 2357715 2358563 R hypothetical protein complement(2357715..2358563) Listeria monocytogenes serotype 4b str. CLIP 80459 7703562 YP_002758982.1 CDS Lm4b_02294 NC_012488.1 2358564 2362271 R ATP-dependent deoxyribonuclease (subunit A) complement(2358564..2362271) Listeria monocytogenes serotype 4b str. CLIP 80459 7703563 YP_002758983.1 CDS addB NC_012488.1 2362273 2365746 R ATP-dependent deoxyribonuclease (subunit B) complement(2362273..2365746) Listeria monocytogenes serotype 4b str. CLIP 80459 7703564 YP_002758984.1 CDS Lm4b_02296 NC_012488.1 2365896 2366132 R hypothetical protein complement(2365896..2366132) Listeria monocytogenes serotype 4b str. CLIP 80459 7704360 YP_002758985.1 CDS comK NC_012488.1 2366383 2366991 D competence transcription factor 2366383..2366991 Listeria monocytogenes serotype 4b str. CLIP 80459 7703565 YP_002758986.1 CDS Lm4b_02298 NC_012488.1 2367046 2367393 R transcriptional regulator complement(2367046..2367393) Listeria monocytogenes serotype 4b str. CLIP 80459 7703259 YP_002758987.1 CDS fruA NC_012488.1 2367499 2369397 R phosphotransferase system (PTS) fructose-specific enzyme IIABC component complement(2367499..2369397) Listeria monocytogenes serotype 4b str. CLIP 80459 7703566 YP_002758988.1 CDS fruB NC_012488.1 2369399 2370322 R fructose-1-phosphate kinase complement(2369399..2370322) Listeria monocytogenes serotype 4b str. CLIP 80459 7702913 YP_002758989.1 CDS Lm4b_02301 NC_012488.1 2370319 2371071 R regulatory protein DeoR family complement(2370319..2371071) Listeria monocytogenes serotype 4b str. CLIP 80459 7702914 YP_002758990.1 CDS pepC NC_012488.1 2371289 2372614 D aminopeptidase C 2371289..2372614 Listeria monocytogenes serotype 4b str. CLIP 80459 7703567 YP_002758991.1 CDS Lm4b_02303 NC_012488.1 2372611 2373054 R hypothetical protein complement(2372611..2373054) Listeria monocytogenes serotype 4b str. CLIP 80459 7704046 YP_002758992.1 CDS Lm4b_02304 NC_012488.1 2373135 2374046 R indigoidine synthase A-like protein (IndA) complement(2373135..2374046) Listeria monocytogenes serotype 4b str. CLIP 80459 7703568 YP_002758993.1 CDS Lm4b_02305 NC_012488.1 2374043 2375161 R carbohydrate kinase complement(2374043..2375161) Listeria monocytogenes serotype 4b str. CLIP 80459 7703569 YP_002758994.1 CDS Lm4b_02306 NC_012488.1 2375294 2375995 R 16S pseudouridylate synthase complement(2375294..2375995) Listeria monocytogenes serotype 4b str. CLIP 80459 7703570 YP_002758995.1 CDS Lm4b_02307 NC_012488.1 2376069 2377391 R nitrilotriacetate monooxygenase complement(2376069..2377391) Listeria monocytogenes serotype 4b str. CLIP 80459 7703571 YP_002758996.1 CDS Lm4b_02308b NC_012488.1 2377388 2377654 R hypothetical protein complement(2377388..2377654) Listeria monocytogenes serotype 4b str. CLIP 80459 7703572 YP_002758997.1 CDS Lm4b_02309 NC_012488.1 2377647 2378642 R hypothetical protein complement(2377647..2378642) Listeria monocytogenes serotype 4b str. CLIP 80459 7703573 YP_002758998.1 CDS Lm4b_02310 NC_012488.1 2378639 2379418 R amino acid ABC-transporter, ATP-binding protein complement(2378639..2379418) Listeria monocytogenes serotype 4b str. CLIP 80459 7703574 YP_002758999.1 CDS Lm4b_02311 NC_012488.1 2379415 2380122 R amino acid ABC transporter permease complement(2379415..2380122) Listeria monocytogenes serotype 4b str. CLIP 80459 7703576 YP_002759000.1 CDS Lm4b_02312 NC_012488.1 2380136 2380852 R amino acid ABC transporter permease complement(2380136..2380852) Listeria monocytogenes serotype 4b str. CLIP 80459 7703577 YP_002759001.1 CDS Lm4b_02313 NC_012488.1 2380874 2381683 R amino acid ABC transporter substrate-binding protein complement(2380874..2381683) Listeria monocytogenes serotype 4b str. CLIP 80459 7703578 YP_002759002.1 CDS Lm4b_02314 NC_012488.1 2381700 2382236 R acetyltransferase, GNAT family complement(2381700..2382236) Listeria monocytogenes serotype 4b str. CLIP 80459 7703579 YP_002759003.1 CDS Lm4b_02315 NC_012488.1 2382252 2382797 R NADH-dependent FMN reductase complement(2382252..2382797) Listeria monocytogenes serotype 4b str. CLIP 80459 7703580 YP_002759004.1 CDS Lm4b_02316 NC_012488.1 2383040 2383939 D LysR family transcriptional regulator 2383040..2383939 Listeria monocytogenes serotype 4b str. CLIP 80459 7703581 YP_002759005.1 CDS Lm4b_02317 NC_012488.1 2383965 2385917 R Na+/H+ antiporter complement(2383965..2385917) Listeria monocytogenes serotype 4b str. CLIP 80459 7703582 YP_002759006.1 CDS Lm4b_02318 NC_012488.1 2386041 2387639 R hypothetical protein complement(2386041..2387639) Listeria monocytogenes serotype 4b str. CLIP 80459 7703583 YP_002759007.1 CDS Lm4b_02319 NC_012488.1 2387643 2388884 R multidrug resistance protein complement(2387643..2388884) Listeria monocytogenes serotype 4b str. CLIP 80459 7703584 YP_002759008.1 CDS Lm4b_02320 NC_012488.1 2389085 2389696 R hypothetical protein complement(2389085..2389696) Listeria monocytogenes serotype 4b str. CLIP 80459 7703585 YP_002759009.1 CDS Lm4b_02321 NC_012488.1 2389886 2390416 R hypothetical protein complement(2389886..2390416) Listeria monocytogenes serotype 4b str. CLIP 80459 7703586 YP_002759010.1 CDS Lm4b_02322 NC_012488.1 2390432 2391163 R N-acetylglucosamine-6-phosphate isomerase complement(2390432..2391163) Listeria monocytogenes serotype 4b str. CLIP 80459 7703587 YP_002759011.1 CDS Lm4b_02323 NC_012488.1 2391207 2392052 R hypothetical protein complement(2391207..2392052) Listeria monocytogenes serotype 4b str. CLIP 80459 7703588 YP_002759012.1 CDS Lm4b_02324 NC_012488.1 2392174 2393481 R 6-phospho-beta-glucosidase complement(2392174..2393481) Listeria monocytogenes serotype 4b str. CLIP 80459 7703589 YP_002759013.1 CDS Lm4b_02325 NC_012488.1 2393501 2395417 R transcription antiterminator BglG family complement(2393501..2395417) Listeria monocytogenes serotype 4b str. CLIP 80459 7703590 YP_002759014.1 CDS Lm4b_02326 NC_012488.1 2395433 2396179 R hypothetical protein complement(2395433..2396179) Listeria monocytogenes serotype 4b str. CLIP 80459 7703591 YP_002759015.1 CDS Lm4b_02327b NC_012488.1 2396192 2396506 R PTS system, cellobiose-specific enzyme IIA component complement(2396192..2396506) Listeria monocytogenes serotype 4b str. CLIP 80459 7703592 YP_002759016.1 CDS Lm4b_02328 NC_012488.1 2396506 2396862 R PTS system, cellobiose-specific enzyme IIB component complement(2396506..2396862) Listeria monocytogenes serotype 4b str. CLIP 80459 7703593 YP_002759017.1 CDS Lm4b_02329 NC_012488.1 2396882 2398183 R PTS system,cellobiose-specific enzyme IIC component complement(2396882..2398183) Listeria monocytogenes serotype 4b str. CLIP 80459 7703594 YP_002759018.1 CDS Lm4b_02330 NC_012488.1 2398347 2401130 R hypothetical protein complement(2398347..2401130) Listeria monocytogenes serotype 4b str. CLIP 80459 7703596 YP_002759019.1 CDS Lm4b_02331 NC_012488.1 2401164 2401634 R hypothetical protein complement(2401164..2401634) Listeria monocytogenes serotype 4b str. CLIP 80459 7703597 YP_002759020.1 CDS Lm4b_02332 NC_012488.1 2402027 2403550 D hypothetical protein 2402027..2403550 Listeria monocytogenes serotype 4b str. CLIP 80459 7703598 YP_002759021.1 CDS Lm4b_02334 NC_012488.1 2403563 2404957 D glutamate decarboxylase 2403563..2404957 Listeria monocytogenes serotype 4b str. CLIP 80459 7703599 YP_002759022.1 CDS Lm4b_02335 NC_012488.1 2404966 2406480 R RofA regulatory protein complement(2404966..2406480) Listeria monocytogenes serotype 4b str. CLIP 80459 7703600 YP_002759023.1 CDS Lm4b_02336 NC_012488.1 2413698 2414456 R transcription regulator DeoR family complement(2413698..2414456) Listeria monocytogenes serotype 4b str. CLIP 80459 7702459 YP_002759024.1 CDS pgi NC_012488.1 2414561 2415913 R functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase complement(2414561..2415913) Listeria monocytogenes serotype 4b str. CLIP 80459 7703602 YP_002759025.1 CDS Lm4b_02338 NC_012488.1 2416015 2416422 R hypothetical protein complement(2416015..2416422) Listeria monocytogenes serotype 4b str. CLIP 80459 7704051 YP_002759026.1 CDS Lm4b_02339 NC_012488.1 2416570 2416923 R induced by heat shock, salt stress, oxidative stress, glucose limitation and oxygen limitation; general stress protein 13 complement(2416570..2416923) Listeria monocytogenes serotype 4b str. CLIP 80459 7703603 YP_002759027.1 CDS Lm4b_02340 NC_012488.1 2417077 2418243 D aminotransferase 2417077..2418243 Listeria monocytogenes serotype 4b str. CLIP 80459 7703604 YP_002759028.1 CDS Lm4b_02341 NC_012488.1 2418382 2419485 D ABC transporter permease 2418382..2419485 Listeria monocytogenes serotype 4b str. CLIP 80459 7703605 YP_002759029.1 CDS Lm4b_02342 NC_012488.1 2419485 2420165 D ABC transporter ATP-binding protein 2419485..2420165 Listeria monocytogenes serotype 4b str. CLIP 80459 7703607 YP_002759030.1 CDS Lm4b_02343 NC_012488.1 2420208 2420522 R phosphotransferase system (PTS) beta-glucoside-specific enzyme IIB component complement(2420208..2420522) Listeria monocytogenes serotype 4b str. CLIP 80459 7704384 YP_002759031.1 CDS Lm4b_02344 NC_012488.1 2420767 2422128 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive; aspartate kinase 2420767..2422128 Listeria monocytogenes serotype 4b str. CLIP 80459 7701774 YP_002759032.1 CDS Lm4b_02345 NC_012488.1 2422173 2422565 R hypothetical protein complement(2422173..2422565) Listeria monocytogenes serotype 4b str. CLIP 80459 7701775 YP_002759033.1 CDS Lm4b_02346 NC_012488.1 2422679 2424049 R hypothetical protein complement(2422679..2424049) Listeria monocytogenes serotype 4b str. CLIP 80459 7701776 YP_002759034.1 CDS Lm4b_02347 NC_012488.1 2424231 2424509 D hypothetical protein 2424231..2424509 Listeria monocytogenes serotype 4b str. CLIP 80459 7701777 YP_002759035.1 CDS Lm4b_02348 NC_012488.1 2424534 2425118 R peptidyl-prolyl cis-trans isomerase complement(2424534..2425118) Listeria monocytogenes serotype 4b str. CLIP 80459 7701778 YP_002759036.1 CDS Lm4b_02349 NC_012488.1 2425350 2426561 D multi-drug resistance efflux pump 2425350..2426561 Listeria monocytogenes serotype 4b str. CLIP 80459 7701779 YP_002759037.1 CDS Lm4b_02350 NC_012488.1 2426906 2429314 D subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit A 2426906..2429314 Listeria monocytogenes serotype 4b str. CLIP 80459 7701780 YP_002759038.1 CDS Lm4b_02351 NC_012488.1 2429298 2429723 D subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in the case of S. meliloti it was proved to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit B 2429298..2429723 Listeria monocytogenes serotype 4b str. CLIP 80459 7701781 YP_002759039.1 CDS Lm4b_02352 NC_012488.1 2429723 2430070 D subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C 2429723..2430070 Listeria monocytogenes serotype 4b str. CLIP 80459 7701782 YP_002759040.1 CDS Lm4b_02353 NC_012488.1 2430063 2431547 D subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D 2430063..2431547 Listeria monocytogenes serotype 4b str. CLIP 80459 7701783 YP_002759041.1 CDS Lm4b_02354 NC_012488.1 2431554 2432033 D subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit E 2431554..2432033 Listeria monocytogenes serotype 4b str. CLIP 80459 7701784 YP_002759042.1 CDS Lm4b_02355 NC_012488.1 2432030 2432317 D subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit F 2432030..2432317 Listeria monocytogenes serotype 4b str. CLIP 80459 7701785 YP_002759043.1 CDS Lm4b_02356 NC_012488.1 2432301 2432894 D subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit G 2432301..2432894 Listeria monocytogenes serotype 4b str. CLIP 80459 7701786 YP_002759044.1 CDS Lm4b_02357 NC_012488.1 2432939 2433310 R thioesterase family protein complement(2432939..2433310) Listeria monocytogenes serotype 4b str. CLIP 80459 7701787 YP_002759045.1 CDS Lm4b_02358 NC_012488.1 2433438 2433911 D hypothetical protein 2433438..2433911 Listeria monocytogenes serotype 4b str. CLIP 80459 7701788 YP_002759046.1 CDS Lm4b_02359 NC_012488.1 2434023 2435243 D hypothetical protein 2434023..2435243 Listeria monocytogenes serotype 4b str. CLIP 80459 7701789 YP_002759047.1 CDS Lm4b_02360 NC_012488.1 2435270 2435899 R transcription regulator complement(2435270..2435899) Listeria monocytogenes serotype 4b str. CLIP 80459 7701790 YP_002759048.1 CDS Lm4b_02361 NC_012488.1 2436037 2436855 R hypothetical protein complement(2436037..2436855) Listeria monocytogenes serotype 4b str. CLIP 80459 7701791 YP_002759049.1 CDS Lm4b_02362 NC_012488.1 2436940 2438151 R NADH dehydrogenase complement(2436940..2438151) Listeria monocytogenes serotype 4b str. CLIP 80459 7701792 YP_002759050.1 CDS Lm4b_02363 NC_012488.1 2438601 2439596 D thioredoxine reductase 2438601..2439596 Listeria monocytogenes serotype 4b str. CLIP 80459 7701793 YP_002759051.1 CDS Lm4b_02364 NC_012488.1 2439684 2440313 D hypothetical protein 2439684..2440313 Listeria monocytogenes serotype 4b str. CLIP 80459 7701794 YP_002759052.1 CDS Lm4b_02365 NC_012488.1 2440359 2440592 R hypothetical protein complement(2440359..2440592) Listeria monocytogenes serotype 4b str. CLIP 80459 7701795 YP_002759053.1 CDS Lm4b_02366 NC_012488.1 2440614 2440940 R hypothetical protein complement(2440614..2440940) Listeria monocytogenes serotype 4b str. CLIP 80459 7701796 YP_002759054.1 CDS Lm4b_02368 NC_012488.1 2442456 2445047 D Cell wall surface anchor family protein (LPXTG motif) 2442456..2445047 Listeria monocytogenes serotype 4b str. CLIP 80459 7701797 YP_002759055.1 CDS Lm4b_02369 NC_012488.1 2445220 2445456 D NifU family protein 2445220..2445456 Listeria monocytogenes serotype 4b str. CLIP 80459 7701798 YP_002759056.1 CDS ltrC NC_012488.1 2445569 2446069 D low temperature requirement C protein 2445569..2446069 Listeria monocytogenes serotype 4b str. CLIP 80459 7701799 YP_002759057.1 CDS Lm4b_02371 NC_012488.1 2446094 2447404 R hypothetical protein complement(2446094..2447404) Listeria monocytogenes serotype 4b str. CLIP 80459 7702542 YP_002759058.1 CDS Lm4b_02372 NC_012488.1 2447440 2447883 R acetyltransferase complement(2447440..2447883) Listeria monocytogenes serotype 4b str. CLIP 80459 7701800 YP_002759059.1 CDS Lm4b_02373 NC_012488.1 2447932 2448699 R hypothetical protein complement(2447932..2448699) Listeria monocytogenes serotype 4b str. CLIP 80459 7701801 YP_002759060.1 CDS Lm4b_02374 NC_012488.1 2448719 2448994 R hypothetical protein complement(2448719..2448994) Listeria monocytogenes serotype 4b str. CLIP 80459 7701802 YP_002759061.1 CDS Lm4b_02375 NC_012488.1 2448991 2450379 R hypothetical protein complement(2448991..2450379) Listeria monocytogenes serotype 4b str. CLIP 80459 7701803 YP_002759062.1 CDS Lm4b_02376 NC_012488.1 2450515 2451354 D hypothetical protein 2450515..2451354 Listeria monocytogenes serotype 4b str. CLIP 80459 7701804 YP_002759063.1 CDS Lm4b_02377 NC_012488.1 2451355 2451720 D hypothetical protein 2451355..2451720 Listeria monocytogenes serotype 4b str. CLIP 80459 7701805 YP_002759064.1 CDS Lm4b_02378 NC_012488.1 2451753 2452595 R hypothetical protein complement(2451753..2452595) Listeria monocytogenes serotype 4b str. CLIP 80459 7701806 YP_002759065.1 CDS Lm4b_02379 NC_012488.1 2452737 2453051 R hypothetical protein complement(2452737..2453051) Listeria monocytogenes serotype 4b str. CLIP 80459 7701807 YP_002759066.1 CDS Lm4b_02380 NC_012488.1 2453186 2454580 R hypothetical protein complement(2453186..2454580) Listeria monocytogenes serotype 4b str. CLIP 80459 7701808 YP_002759067.1 CDS Lm4b_02381 NC_012488.1 2454603 2455046 R hypothetical protein complement(2454603..2455046) Listeria monocytogenes serotype 4b str. CLIP 80459 7701809 YP_002759068.1 CDS Lm4b_02382 NC_012488.1 2455043 2456269 R aminotransferase complement(2455043..2456269) Listeria monocytogenes serotype 4b str. CLIP 80459 7701810 YP_002759069.1 CDS Lm4b_02383 NC_012488.1 2456270 2457571 R aminotransferase complement(2456270..2457571) Listeria monocytogenes serotype 4b str. CLIP 80459 7701811 YP_002759070.1 CDS Lm4b_02384 NC_012488.1 2457590 2458375 R ABC transporter ATP-binding protein complement(2457590..2458375) Listeria monocytogenes serotype 4b str. CLIP 80459 7701812 YP_002759071.1 CDS Lm4b_02385 NC_012488.1 2458715 2459791 D hypothetical protein 2458715..2459791 Listeria monocytogenes serotype 4b str. CLIP 80459 7701813 YP_002759072.1 CDS Lm4b_02386 NC_012488.1 2459833 2460663 R Conserved lipoprotein (ABC transporter binding protein) complement(2459833..2460663) Listeria monocytogenes serotype 4b str. CLIP 80459 7701814 YP_002759073.1 CDS Lm4b_02387 NC_012488.1 2460728 2461402 R ABC transporter permease complement(2460728..2461402) Listeria monocytogenes serotype 4b str. CLIP 80459 7701815 YP_002759074.1 CDS Lm4b_02388 NC_012488.1 2461399 2462421 R ABC transporter ATP-binding protein complement(2461399..2462421) Listeria monocytogenes serotype 4b str. CLIP 80459 7701816 YP_002759075.1 CDS Lm4b_02389 NC_012488.1 2463005 2464147 R two-component sensor histidine kinase complement(2463005..2464147) Listeria monocytogenes serotype 4b str. CLIP 80459 7701817 YP_002759076.1 CDS Lm4b_02390 NC_012488.1 2464137 2464832 R two-component response regulator complement(2464137..2464832) Listeria monocytogenes serotype 4b str. CLIP 80459 7701818 YP_002759077.1 CDS Lm4b_02391 NC_012488.1 2464907 2465782 R hypothetical protein complement(2464907..2465782) Listeria monocytogenes serotype 4b str. CLIP 80459 7701819 YP_002759078.1 CDS Lm4b_02392 NC_012488.1 2465974 2466282 R thioredoxin complement(2465974..2466282) Listeria monocytogenes serotype 4b str. CLIP 80459 7701820 YP_002759079.1 CDS Lm4b_02393 NC_012488.1 2466343 2466720 R part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H complement(2466343..2466720) Listeria monocytogenes serotype 4b str. CLIP 80459 7701821 YP_002759080.1 CDS Lm4b_02394 NC_012488.1 2466761 2467114 R hypothetical protein complement(2466761..2467114) Listeria monocytogenes serotype 4b str. CLIP 80459 7701822 YP_002759081.1 CDS Lm4b_02395 NC_012488.1 2467271 2468446 R cell division protein RodA, FtsW family complement(2467271..2468446) Listeria monocytogenes serotype 4b str. CLIP 80459 7701823 YP_002759082.1 CDS Lm4b_02396 NC_012488.1 2468522 2469691 R cell division protein RodA, FtsW family complement(2468522..2469691) Listeria monocytogenes serotype 4b str. CLIP 80459 7701824 YP_002759083.1 CDS Lm4b_02397 NC_012488.1 2469833 2470624 R ferrichrome ABC transporter (ATP-binding protein) FhuC complement(2469833..2470624) Listeria monocytogenes serotype 4b str. CLIP 80459 7701825 YP_002759084.1 CDS Lm4b_02398 NC_012488.1 2470621 2471631 R ferrichrome ABC transporter (permease) FhuG complement(2470621..2471631) Listeria monocytogenes serotype 4b str. CLIP 80459 7701826 YP_002759085.1 CDS Lm4b_02399 NC_012488.1 2471631 2472602 R ferrichrome ABC transporter fhuD precursor (ferrichrome-binding protein) complement(2471631..2472602) Listeria monocytogenes serotype 4b str. CLIP 80459 7701827 YP_002759086.1 CDS Lm4b_02400 NC_012488.1 2472758 2472922 D hypothetical protein 2472758..2472922 Listeria monocytogenes serotype 4b str. CLIP 80459 7701828 YP_002759087.1 CDS Lm4b_02401 NC_012488.1 2473086 2473811 D acetylesterase 2473086..2473811 Listeria monocytogenes serotype 4b str. CLIP 80459 7701829 YP_002759088.1 CDS Lm4b_02402 NC_012488.1 2473851 2475254 R glutamate decarboxylase complement(2473851..2475254) Listeria monocytogenes serotype 4b str. CLIP 80459 7701830 YP_002759089.1 CDS Lm4b_02403b NC_012488.1 2475381 2475689 D hypothetical protein 2475381..2475689 Listeria monocytogenes serotype 4b str. CLIP 80459 7701831 YP_002759090.1 CDS Lm4b_02404 NC_012488.1 2475750 2476604 R transcription antiterminator complement(2475750..2476604) Listeria monocytogenes serotype 4b str. CLIP 80459 7701833 YP_002759091.1 CDS Lm4b_02405 NC_012488.1 2476872 2477282 D hypothetical protein 2476872..2477282 Listeria monocytogenes serotype 4b str. CLIP 80459 7701835 YP_002759092.1 CDS Lm4b_02406 NC_012488.1 2477305 2477817 R hypothetical protein complement(2477305..2477817) Listeria monocytogenes serotype 4b str. CLIP 80459 7701836 YP_002759093.1 CDS Lm4b_02407 NC_012488.1 2477941 2478282 D hypothetical protein 2477941..2478282 Listeria monocytogenes serotype 4b str. CLIP 80459 7701837 YP_002759094.1 CDS Lm4b_02408 NC_012488.1 2478314 2478697 R hypothetical protein complement(2478314..2478697) Listeria monocytogenes serotype 4b str. CLIP 80459 7701838 YP_002759095.1 CDS Lm4b_02409 NC_012488.1 2478753 2479649 R transcription regulator complement(2478753..2479649) Listeria monocytogenes serotype 4b str. CLIP 80459 7701839 YP_002759096.1 CDS Lm4b_02410 NC_012488.1 2479694 2480263 R hypothetical protein complement(2479694..2480263) Listeria monocytogenes serotype 4b str. CLIP 80459 7701840 YP_002759097.1 CDS Lm4b_02411 NC_012488.1 2480439 2480864 R hypothetical protein complement(2480439..2480864) Listeria monocytogenes serotype 4b str. CLIP 80459 7701841 YP_002759098.1 CDS Lm4b_02412 NC_012488.1 2481780 2482841 R cell surface protein complement(2481780..2482841) Listeria monocytogenes serotype 4b str. CLIP 80459 7701842 YP_002759099.1 CDS Lm4b_02413 NC_012488.1 2482892 2486824 R glycosidase complement(2482892..2486824) Listeria monocytogenes serotype 4b str. CLIP 80459 7701843 YP_002759100.1 CDS Lm4b_02414 NC_012488.1 2486839 2487783 R internalin complement(2486839..2487783) Listeria monocytogenes serotype 4b str. CLIP 80459 7701844 YP_002759101.1 CDS Lm4b_02415 NC_012488.1 2487844 2491119 R glycosidase complement(2487844..2491119) Listeria monocytogenes serotype 4b str. CLIP 80459 7701845 YP_002759102.1 CDS Lm4b_02416 NC_012488.1 2491502 2492410 D transcription regulator 2491502..2492410 Listeria monocytogenes serotype 4b str. CLIP 80459 7701846 YP_002759103.1 CDS smpB NC_012488.1 2492466 2492930 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(2492466..2492930) Listeria monocytogenes serotype 4b str. CLIP 80459 7701847 YP_002759104.1 CDS Lm4b_02418 NC_012488.1 2492946 2495327 R exoribonuclease RNase-R complement(2492946..2495327) Listeria monocytogenes serotype 4b str. CLIP 80459 7701848 YP_002759105.1 CDS Lm4b_02419 NC_012488.1 2495361 2496107 R carboxylesterase complement(2495361..2496107) Listeria monocytogenes serotype 4b str. CLIP 80459 7701849 YP_002759106.1 CDS secG NC_012488.1 2496576 2496809 R preprotein translocase subunit SecG complement(2496576..2496809) Listeria monocytogenes serotype 4b str. CLIP 80459 7701850 YP_002759107.1 CDS Lm4b_02421 NC_012488.1 2496899 2497642 R carboxylesterase complement(2496899..2497642) Listeria monocytogenes serotype 4b str. CLIP 80459 7701851 YP_002759108.1 CDS Lm4b_02422 NC_012488.1 2497825 2498544 R lipolytic enzyme complement(2497825..2498544) Listeria monocytogenes serotype 4b str. CLIP 80459 7701852 YP_002759109.1 CDS Lm4b_02423 NC_012488.1 2498677 2498850 R hypothetical protein complement(2498677..2498850) Listeria monocytogenes serotype 4b str. CLIP 80459 7701853 YP_002759110.1 CDS eno NC_012488.1 2498953 2500245 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(2498953..2500245) Listeria monocytogenes serotype 4b str. CLIP 80459 7701854 YP_002759111.1 CDS pgm NC_012488.1 2500381 2501913 R catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase complement(2500381..2501913) Listeria monocytogenes serotype 4b str. CLIP 80459 7702893 YP_002759112.1 CDS tpiA NC_012488.1 2501915 2502670 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(2501915..2502670) Listeria monocytogenes serotype 4b str. CLIP 80459 7704053 YP_002759113.1 CDS pgk NC_012488.1 2502716 2503906 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(2502716..2503906) Listeria monocytogenes serotype 4b str. CLIP 80459 7701606 YP_002759114.1 CDS gap NC_012488.1 2504041 2505051 R glyceraldehyde 3-phosphate dehydrogenase complement(2504041..2505051) Listeria monocytogenes serotype 4b str. CLIP 80459 7704052 YP_002759115.1 CDS Lm4b_02429 NC_012488.1 2505084 2506130 R transcriptional regulator CggR complement(2505084..2506130) Listeria monocytogenes serotype 4b str. CLIP 80459 7702925 YP_002759116.1 CDS sigL NC_012488.1 2506571 2507914 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 complement(2506571..2507914) Listeria monocytogenes serotype 4b str. CLIP 80459 7704221 YP_002759117.1 CDS Lm4b_02431 NC_012488.1 2508074 2509000 R dipeptidase complement(2508074..2509000) Listeria monocytogenes serotype 4b str. CLIP 80459 7701587 YP_002759118.1 CDS Lm4b_02432 NC_012488.1 2509079 2511241 R transport protein complement(2509079..2511241) Listeria monocytogenes serotype 4b str. CLIP 80459 7704093 YP_002759119.1 CDS Lm4b_02433 NC_012488.1 2511321 2511929 R transcription regulator complement(2511321..2511929) Listeria monocytogenes serotype 4b str. CLIP 80459 7704094 YP_002759120.1 CDS Lm4b_02434 NC_012488.1 2511946 2512344 R hypothetical protein complement(2511946..2512344) Listeria monocytogenes serotype 4b str. CLIP 80459 7704095 YP_002759121.1 CDS Lm4b_02435 NC_012488.1 2512577 2512912 D hypothetical protein 2512577..2512912 Listeria monocytogenes serotype 4b str. CLIP 80459 7704096 YP_002759122.1 CDS Lm4b_02436 NC_012488.1 2513160 2514596 R chitinase and chitin binding protein complement(2513160..2514596) Listeria monocytogenes serotype 4b str. CLIP 80459 7704348 YP_002759123.1 CDS clpP NC_012488.1 2514752 2515348 D hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2514752..2515348 Listeria monocytogenes serotype 4b str. CLIP 80459 7704098 YP_002759124.1 CDS Lm4b_02438 NC_012488.1 2515397 2516788 R amino acid transporter complement(2515397..2516788) Listeria monocytogenes serotype 4b str. CLIP 80459 7703242 YP_002759125.1 CDS Lm4b_02439 NC_012488.1 2517005 2518171 D internalin protein 2517005..2518171 Listeria monocytogenes serotype 4b str. CLIP 80459 7704099 YP_002759126.1 CDS Lm4b_02440 NC_012488.1 2518224 2519240 R catalyzes the reduction of alpha, beta-unsaturated aldehydes and ketones; reduces the nitro group nitroester and nitroaromatic compounds; NADPH dehydrogenase NamA complement(2518224..2519240) Listeria monocytogenes serotype 4b str. CLIP 80459 7704100 YP_002759127.1 CDS Lm4b_02441 NC_012488.1 2519267 2520238 R hypothetical protein complement(2519267..2520238) Listeria monocytogenes serotype 4b str. CLIP 80459 7704101 YP_002759128.1 CDS Lm4b_02442 NC_012488.1 2520246 2521214 R hypothetical protein complement(2520246..2521214) Listeria monocytogenes serotype 4b str. CLIP 80459 7704102 YP_002759129.1 CDS Lm4b_02443 NC_012488.1 2521216 2522091 R hypothetical protein complement(2521216..2522091) Listeria monocytogenes serotype 4b str. CLIP 80459 7704103 YP_002759130.1 CDS Lm4b_02444 NC_012488.1 2522199 2523929 R phosphomannomutase and phosphoglucomutase complement(2522199..2523929) Listeria monocytogenes serotype 4b str. CLIP 80459 7704104 YP_002759131.1 CDS Lm4b_02445 NC_012488.1 2523971 2525032 R aldose 1-epimerase (mutarotase) complement(2523971..2525032) Listeria monocytogenes serotype 4b str. CLIP 80459 7704105 YP_002759132.1 CDS galE NC_012488.1 2525049 2526032 R UDP-glucose 4-epimerase complement(2525049..2526032) Listeria monocytogenes serotype 4b str. CLIP 80459 7704106 YP_002759133.1 CDS trxB NC_012488.1 2526152 2527111 R thioredoxin reductase complement(2526152..2527111) Listeria monocytogenes serotype 4b str. CLIP 80459 7702924 YP_002759134.1 CDS Lm4b_02448 NC_012488.1 2527190 2528665 R hypothetical protein complement(2527190..2528665) Listeria monocytogenes serotype 4b str. CLIP 80459 7701619 YP_002759135.1 CDS Lm4b_02449 NC_012488.1 2528750 2529247 R acetyltransferase complement(2528750..2529247) Listeria monocytogenes serotype 4b str. CLIP 80459 7704107 YP_002759136.1 CDS Lm4b_02450 NC_012488.1 2529251 2529904 R hydrolyzes pyrophosphate formed during serine-46-phosphorylated HPr dephosphorylation; pyrophosphatase PpaX complement(2529251..2529904) Listeria monocytogenes serotype 4b str. CLIP 80459 7704108 YP_002759137.1 CDS lgt NC_012488.1 2529948 2530781 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(2529948..2530781) Listeria monocytogenes serotype 4b str. CLIP 80459 7704109 YP_002759138.1 CDS Lm4b_02452 NC_012488.1 2530867 2531805 R catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase complement(2530867..2531805) Listeria monocytogenes serotype 4b str. CLIP 80459 7702533 YP_002759139.1 CDS Lm4b_02453 NC_012488.1 2531992 2532345 R hypothetical protein complement(2531992..2532345) Listeria monocytogenes serotype 4b str. CLIP 80459 7704110 YP_002759140.1 CDS Lm4b_02454 NC_012488.1 2532354 2532554 R PspC domain-containing protein complement(2532354..2532554) Listeria monocytogenes serotype 4b str. CLIP 80459 7704111 YP_002759141.1 CDS Lm4b_02455 NC_012488.1 2532578 2533789 R hypothetical protein complement(2532578..2533789) Listeria monocytogenes serotype 4b str. CLIP 80459 7704112 YP_002759142.1 CDS Lm4b_02456 NC_012488.1 2533856 2535118 R hypothetical protein complement(2533856..2535118) Listeria monocytogenes serotype 4b str. CLIP 80459 7704113 YP_002759143.1 CDS uvrA NC_012488.1 2535327 2538197 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A complement(2535327..2538197) Listeria monocytogenes serotype 4b str. CLIP 80459 7704114 YP_002759144.1 CDS uvrB NC_012488.1 2538205 2540181 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(2538205..2540181) Listeria monocytogenes serotype 4b str. CLIP 80459 7701627 YP_002759145.1 CDS Lm4b_02459 NC_012488.1 2540432 2540671 R CsbA protein complement(2540432..2540671) Listeria monocytogenes serotype 4b str. CLIP 80459 7701628 YP_002759146.1 CDS Lm4b_02460 NC_012488.1 2540692 2541339 R hypothetical protein complement(2540692..2541339) Listeria monocytogenes serotype 4b str. CLIP 80459 7704115 YP_002759147.1 CDS Lm4b_02461 NC_012488.1 2541361 2541747 R hypothetical protein complement(2541361..2541747) Listeria monocytogenes serotype 4b str. CLIP 80459 7704116 YP_002759148.1 CDS Lm4b_02462 NC_012488.1 2541853 2542158 R transcription regulator ArsR family complement(2541853..2542158) Listeria monocytogenes serotype 4b str. CLIP 80459 7704117 YP_002759149.1 CDS Lm4b_02463 NC_012488.1 2542426 2543085 R negative regulator of phosphate regulon complement(2542426..2543085) Listeria monocytogenes serotype 4b str. CLIP 80459 7704118 YP_002759150.1 CDS Lm4b_02464 NC_012488.1 2543098 2543877 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein complement(2543098..2543877) Listeria monocytogenes serotype 4b str. CLIP 80459 7704119 YP_002759151.1 CDS Lm4b_02465 NC_012488.1 2543892 2544710 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein complement(2543892..2544710) Listeria monocytogenes serotype 4b str. CLIP 80459 7704120 YP_002759152.1 CDS Lm4b_02466 NC_012488.1 2544735 2545619 R phosphate ABC transporter permease complement(2544735..2545619) Listeria monocytogenes serotype 4b str. CLIP 80459 7704121 YP_002759153.1 CDS Lm4b_02467 NC_012488.1 2545616 2546566 R phosphate ABC transporter permease complement(2545616..2546566) Listeria monocytogenes serotype 4b str. CLIP 80459 7704122 YP_002759154.1 CDS Lm4b_02468 NC_012488.1 2546633 2547541 R phosphate ABC transporter (binding protein) complement(2546633..2547541) Listeria monocytogenes serotype 4b str. CLIP 80459 7704123 YP_002759155.1 CDS phoR NC_012488.1 2547797 2549572 R two-component sensor histidine kinase complement(2547797..2549572) Listeria monocytogenes serotype 4b str. CLIP 80459 7704124 YP_002759156.1 CDS phoP NC_012488.1 2549572 2550282 R two-component response phosphate regulator complement(2549572..2550282) Listeria monocytogenes serotype 4b str. CLIP 80459 7704058 YP_002759157.1 CDS Lm4b_02471 NC_012488.1 2550433 2551608 R hypothetical protein complement(2550433..2551608) Listeria monocytogenes serotype 4b str. CLIP 80459 7704057 YP_002759158.1 CDS Lm4b_02472 NC_012488.1 2551636 2553084 R cardiolipin synthase complement(2551636..2553084) Listeria monocytogenes serotype 4b str. CLIP 80459 7704125 YP_002759159.1 CDS Lm4b_02473 NC_012488.1 2553208 2554518 R cell wall binding protein complement(2553208..2554518) Listeria monocytogenes serotype 4b str. CLIP 80459 7704126 YP_002759160.1 CDS spl NC_012488.1 2554638 2555843 R peptidoglycan lytic protein P45 complement(2554638..2555843) Listeria monocytogenes serotype 4b str. CLIP 80459 7704127 YP_002759161.1 CDS ftsX NC_012488.1 2555919 2556803 R cell-division protein FtsX complement(2555919..2556803) Listeria monocytogenes serotype 4b str. CLIP 80459 7701591 YP_002759162.1 CDS ftsE NC_012488.1 2556793 2557479 R the cell-division ATP-binding protein FtsE complement(2556793..2557479) Listeria monocytogenes serotype 4b str. CLIP 80459 7702919 YP_002759163.1 CDS Lm4b_02477 NC_012488.1 2557986 2558849 R hypothetical protein complement(2557986..2558849) Listeria monocytogenes serotype 4b str. CLIP 80459 7702920 YP_002759164.1 CDS prfB NC_012488.1 2558855 2559871 R recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 complement(2558855..2559871) Listeria monocytogenes serotype 4b str. CLIP 80459 7704128 YP_002759165.1 CDS secA NC_012488.1 2560041 2562554 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA complement(2560041..2562554) Listeria monocytogenes serotype 4b str. CLIP 80459 7704068 YP_002759166.1 CDS Lm4b_02480 NC_012488.1 2562785 2563348 R hypothetical protein complement(2562785..2563348) Listeria monocytogenes serotype 4b str. CLIP 80459 7701579 YP_002759167.1 CDS comFC NC_012488.1 2563543 2564199 R late competence protein comFC complement(2563543..2564199) Listeria monocytogenes serotype 4b str. CLIP 80459 7704129 YP_002759168.1 CDS comFA NC_012488.1 2564192 2565511 R late competence protein comFA complement(2564192..2565511) Listeria monocytogenes serotype 4b str. CLIP 80459 7703255 YP_002759169.1 CDS Lm4b_02483 NC_012488.1 2565707 2566558 R YviA (DegV) protein complement(2565707..2566558) Listeria monocytogenes serotype 4b str. CLIP 80459 7703254 YP_002759170.1 CDS Lm4b_02484 NC_012488.1 2566579 2567265 R two-component response regulator DegU complement(2566579..2567265) Listeria monocytogenes serotype 4b str. CLIP 80459 7704130 YP_002759171.1 CDS Lm4b_02485 NC_012488.1 2567650 2568285 D hypothetical protein 2567650..2568285 Listeria monocytogenes serotype 4b str. CLIP 80459 7704131 YP_002759172.1 CDS Lm4b_02486 NC_012488.1 2568287 2568832 D hypothetical protein 2568287..2568832 Listeria monocytogenes serotype 4b str. CLIP 80459 7704133 YP_002759173.1 CDS Lm4b_02487 NC_012488.1 2569008 2570066 D transcriptional regulator LytR 2569008..2570066 Listeria monocytogenes serotype 4b str. CLIP 80459 7704134 YP_002759174.1 CDS Lm4b_02488 NC_012488.1 2570104 2571156 R TagO teichoic acid linkage unit synthesis protein complement(2570104..2571156) Listeria monocytogenes serotype 4b str. CLIP 80459 7704135 YP_002759175.1 CDS Lm4b_02489 NC_012488.1 2571164 2572288 R N-acylamino acid racemase complement(2571164..2572288) Listeria monocytogenes serotype 4b str. CLIP 80459 7704136 YP_002759176.1 CDS Lm4b_02490 NC_012488.1 2572289 2573023 R TagA protein involved in polyglycerol phosphate biosynthesis complement(2572289..2573023) Listeria monocytogenes serotype 4b str. CLIP 80459 7704137 YP_002759177.1 CDS Lm4b_02491 NC_012488.1 2573150 2573983 R cell wall binding protein complement(2573150..2573983) Listeria monocytogenes serotype 4b str. CLIP 80459 7704138 YP_002759178.1 CDS Lm4b_02492 NC_012488.1 2574374 2574739 R single-strand DNA-binding protein complement(2574374..2574739) Listeria monocytogenes serotype 4b str. CLIP 80459 7704139 YP_002759179.1 CDS fabZ NC_012488.1 2574990 2575424 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(2574990..2575424) Listeria monocytogenes serotype 4b str. CLIP 80459 7704140 YP_002759180.1 CDS mbl NC_012488.1 2575447 2576442 R rod shape-determining protein MreB complement(2575447..2576442) Listeria monocytogenes serotype 4b str. CLIP 80459 7704141 YP_002759181.1 CDS murA NC_012488.1 2576605 2577897 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(2576605..2577897) Listeria monocytogenes serotype 4b str. CLIP 80459 7702545 YP_002759182.1 CDS Lm4b_02496 NC_012488.1 2578079 2578315 R membrane protein complement(2578079..2578315) Listeria monocytogenes serotype 4b str. CLIP 80459 7702566 YP_002759183.1 CDS atpC NC_012488.1 2578437 2578841 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(2578437..2578841) Listeria monocytogenes serotype 4b str. CLIP 80459 7704142 YP_002759184.1 CDS atpD NC_012488.1 2578863 2580284 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(2578863..2580284) Listeria monocytogenes serotype 4b str. CLIP 80459 7703209 YP_002759185.1 CDS atpG NC_012488.1 2580345 2581217 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(2580345..2581217) Listeria monocytogenes serotype 4b str. CLIP 80459 7703210 YP_002759186.1 CDS atpA NC_012488.1 2581255 2582769 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(2581255..2582769) Listeria monocytogenes serotype 4b str. CLIP 80459 7703213 YP_002759187.1 CDS atpH NC_012488.1 2582796 2583335 R Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta complement(2582796..2583335) Listeria monocytogenes serotype 4b str. CLIP 80459 7703207 YP_002759188.1 CDS atpF NC_012488.1 2583332 2583844 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B complement(2583332..2583844) Listeria monocytogenes serotype 4b str. CLIP 80459 7703214 YP_002759189.1 CDS atpE NC_012488.1 2583932 2584150 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C complement(2583932..2584150) Listeria monocytogenes serotype 4b str. CLIP 80459 7703212 YP_002759190.1 CDS atpB NC_012488.1 2584222 2584938 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(2584222..2584938) Listeria monocytogenes serotype 4b str. CLIP 80459 7703211 YP_002759191.1 CDS atpI NC_012488.1 2584945 2585343 R ATP synthase subunit i complement(2584945..2585343) Listeria monocytogenes serotype 4b str. CLIP 80459 7703208 YP_002759192.1 CDS Lm4b_02506 NC_012488.1 2586174 2587313 R UDP-N-acetylglucosamine 2-epimerase complement(2586174..2587313) Listeria monocytogenes serotype 4b str. CLIP 80459 7703215 YP_002759193.1 CDS upp NC_012488.1 2587431 2588060 R Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase complement(2587431..2588060) Listeria monocytogenes serotype 4b str. CLIP 80459 7704143 YP_002759194.1 CDS glyA NC_012488.1 2588198 2589439 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(2588198..2589439) Listeria monocytogenes serotype 4b str. CLIP 80459 7701626 YP_002759195.1 CDS Lm4b_02509b NC_012488.1 2589575 2589982 R phosphatase complement(2589575..2589982) Listeria monocytogenes serotype 4b str. CLIP 80459 7702944 YP_002759196.1 CDS Lm4b_02510 NC_012488.1 2589979 2591016 R yeast translation initiation protein complement(2589979..2591016) Listeria monocytogenes serotype 4b str. CLIP 80459 7704144 YP_002759197.1 CDS Lm4b_02511 NC_012488.1 2591317 2592168 R protoporphyrinogen oxidase complement(2591317..2592168) Listeria monocytogenes serotype 4b str. CLIP 80459 7704145 YP_002759198.1 CDS prfA NC_012488.1 2592155 2593231 R recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 complement(2592155..2593231) Listeria monocytogenes serotype 4b str. CLIP 80459 7704147 YP_002759199.1 CDS Lm4b_02513 NC_012488.1 2593254 2593829 R catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase complement(2593254..2593829) Listeria monocytogenes serotype 4b str. CLIP 80459 7704066 YP_002759200.1 CDS thrB NC_012488.1 2593941 2594807 R catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase complement(2593941..2594807) Listeria monocytogenes serotype 4b str. CLIP 80459 7704148 YP_002759201.1 CDS thrC NC_012488.1 2594807 2595862 R catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase complement(2594807..2595862) Listeria monocytogenes serotype 4b str. CLIP 80459 7701598 YP_002759202.1 CDS hom NC_012488.1 2595865 2597151 R catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase complement(2595865..2597151) Listeria monocytogenes serotype 4b str. CLIP 80459 7701599 YP_002759203.1 CDS rpmE2 NC_012488.1 2597373 2597618 R RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 type B complement(2597373..2597618) Listeria monocytogenes serotype 4b str. CLIP 80459 7702499 YP_002759204.1 CDS gtcA NC_012488.1 2597720 2598157 R cell wall teichoic acid glycosylation protein GtcA complement(2597720..2598157) Listeria monocytogenes serotype 4b str. CLIP 80459 7702426 YP_002759205.1 CDS rho NC_012488.1 2598190 2599461 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(2598190..2599461) Listeria monocytogenes serotype 4b str. CLIP 80459 7702952 YP_002759206.1 CDS murZ NC_012488.1 2599566 2600837 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(2599566..2600837) Listeria monocytogenes serotype 4b str. CLIP 80459 7702594 YP_002759207.1 CDS Lm4b_02521 NC_012488.1 2600954 2602027 R hypothetical protein complement(2600954..2602027) Listeria monocytogenes serotype 4b str. CLIP 80459 7704014 YP_002759208.1 CDS Lm4b_02522 NC_012488.1 2602034 2603059 R galactosyltransferase complement(2602034..2603059) Listeria monocytogenes serotype 4b str. CLIP 80459 7704149 YP_002759209.1 CDS Lm4b_02523 NC_012488.1 2603052 2604335 R human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein complement(2603052..2604335) Listeria monocytogenes serotype 4b str. CLIP 80459 7704150 YP_002759210.1 CDS fbaA NC_012488.1 2604656 2605510 R fructose-1,6-bisphosphate aldolase complement(2604656..2605510) Listeria monocytogenes serotype 4b str. CLIP 80459 7704151 YP_002759211.1 CDS Lm4b_02525 NC_012488.1 2605678 2606598 R similar to YegS from E. coli; putative lipid kinase complement(2605678..2606598) Listeria monocytogenes serotype 4b str. CLIP 80459 7702899 YP_002759212.1 CDS ami NC_012488.1 2606915 2609227 D autolysin, amidase 2606915..2609227 Listeria monocytogenes serotype 4b str. CLIP 80459 7704152 YP_002759213.1 CDS pyrG NC_012488.1 2609280 2610878 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(2609280..2610878) Listeria monocytogenes serotype 4b str. CLIP 80459 7704365 YP_002759214.1 CDS Lm4b_02528 NC_012488.1 2611243 2611779 R participates in both the initiation and recycling phases of transcription; in the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; DNA-directed RNA polymerase subunit delta complement(2611243..2611779) Listeria monocytogenes serotype 4b str. CLIP 80459 7702576 YP_002759215.1 CDS argS NC_012488.1 2612145 2613815 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(2612145..2613815) Listeria monocytogenes serotype 4b str. CLIP 80459 7704153 YP_002759216.1 CDS Lm4b_02530 NC_012488.1 2613812 2614261 R hypothetical protein complement(2613812..2614261) Listeria monocytogenes serotype 4b str. CLIP 80459 7704376 YP_002759217.1 CDS Lm4b_02531 NC_012488.1 2614339 2614992 R hypothetical protein complement(2614339..2614992) Listeria monocytogenes serotype 4b str. CLIP 80459 7704154 YP_002759218.1 CDS Lm4b_02532 NC_012488.1 2615066 2615251 D 4-oxalocrotonate isomerase 2615066..2615251 Listeria monocytogenes serotype 4b str. CLIP 80459 7704155 YP_002759219.1 CDS Lm4b_02533 NC_012488.1 2615286 2616608 R hypothetical protein complement(2615286..2616608) Listeria monocytogenes serotype 4b str. CLIP 80459 7704156 YP_002759220.1 CDS Lm4b_02534 NC_012488.1 2616623 2617459 R hypothetical protein complement(2616623..2617459) Listeria monocytogenes serotype 4b str. CLIP 80459 7704157 YP_002759221.1 CDS Lm4b_02535 NC_012488.1 2617777 2617977 R hypothetical protein complement(2617777..2617977) Listeria monocytogenes serotype 4b str. CLIP 80459 7704158 YP_002759222.1 CDS Lm4b_02536 NC_012488.1 2618000 2618323 R hypothetical protein complement(2618000..2618323) Listeria monocytogenes serotype 4b str. CLIP 80459 7704159 YP_002759223.1 CDS Lm4b_02537 NC_012488.1 2618477 2620138 R dipeptide ABC transporter (dipeptide-binding protein) complement(2618477..2620138) Listeria monocytogenes serotype 4b str. CLIP 80459 7704160 YP_002759224.1 CDS Lm4b_02538 NC_012488.1 2620273 2620887 R hypothetical protein complement(2620273..2620887) Listeria monocytogenes serotype 4b str. CLIP 80459 7704161 YP_002759225.1 CDS Lm4b_02539 NC_012488.1 2620911 2621543 R nicotinamidase complement(2620911..2621543) Listeria monocytogenes serotype 4b str. CLIP 80459 7704162 YP_002759226.1 CDS Lm4b_02540 NC_012488.1 2621544 2622068 R Chain A, Dihydrofolate Reductase complement(2621544..2622068) Listeria monocytogenes serotype 4b str. CLIP 80459 7704163 YP_002759227.1 CDS Lm4b_02541 NC_012488.1 2622071 2623069 R zinc-binding dehydrogenase complement(2622071..2623069) Listeria monocytogenes serotype 4b str. CLIP 80459 7704164 YP_002759228.1 CDS Lm4b_02542 NC_012488.1 2623166 2623438 R hypothetical protein complement(2623166..2623438) Listeria monocytogenes serotype 4b str. CLIP 80459 7704165 YP_002759229.1 CDS Lm4b_02543 NC_012488.1 2623487 2624398 R cation transport protein (efflux) complement(2623487..2624398) Listeria monocytogenes serotype 4b str. CLIP 80459 7704166 YP_002759230.1 CDS Lm4b_02544 NC_012488.1 2624776 2625603 R hypothetical protein complement(2624776..2625603) Listeria monocytogenes serotype 4b str. CLIP 80459 7704167 YP_002759231.1 CDS Lm4b_02545 NC_012488.1 2625718 2626593 D hypothetical protein 2625718..2626593 Listeria monocytogenes serotype 4b str. CLIP 80459 7704168 YP_002759232.1 CDS Lm4b_02546 NC_012488.1 2626604 2626897 D hypothetical protein 2626604..2626897 Listeria monocytogenes serotype 4b str. CLIP 80459 7704169 YP_002759233.1 CDS Lm4b_02547 NC_012488.1 2627121 2627789 R ABC transporter ATP-binding protein complement(2627121..2627789) Listeria monocytogenes serotype 4b str. CLIP 80459 7704170 YP_002759234.1 CDS Lm4b_02548 NC_012488.1 2627789 2628877 R hypothetical protein complement(2627789..2628877) Listeria monocytogenes serotype 4b str. CLIP 80459 7704171 YP_002759235.1 CDS Lm4b_02549 NC_012488.1 2628956 2630335 R two-component sensor histidine kinase complement(2628956..2630335) Listeria monocytogenes serotype 4b str. CLIP 80459 7704172 YP_002759236.1 CDS Lm4b_02550 NC_012488.1 2630332 2631009 R two-component response regulator complement(2630332..2631009) Listeria monocytogenes serotype 4b str. CLIP 80459 7704173 YP_002759237.1 CDS Lm4b_02551 NC_012488.1 2631056 2631844 R involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein complement(2631056..2631844) Listeria monocytogenes serotype 4b str. CLIP 80459 7704174 YP_002759238.1 CDS Lm4b_02552 NC_012488.1 2631903 2632379 R hypothetical protein complement(2631903..2632379) Listeria monocytogenes serotype 4b str. CLIP 80459 7702719 YP_002759239.1 CDS Lm4b_02553 NC_012488.1 2632379 2635366 R formate dehydrogenase alpha chain complement(2632379..2635366) Listeria monocytogenes serotype 4b str. CLIP 80459 7702720 YP_002759240.1 CDS Lm4b_02554 NC_012488.1 2635864 2636706 D hypothetical protein 2635864..2636706 Listeria monocytogenes serotype 4b str. CLIP 80459 7702721 YP_002759241.1 CDS Lm4b_02555 NC_012488.1 2636757 2638238 R drug-export protein complement(2636757..2638238) Listeria monocytogenes serotype 4b str. CLIP 80459 7702722 YP_002759242.1 CDS Lm4b_02556 NC_012488.1 2638339 2639226 R TetR family transcriptional regulator complement(2638339..2639226) Listeria monocytogenes serotype 4b str. CLIP 80459 7702723 YP_002759243.1 CDS Lm4b_02557 NC_012488.1 2645017 2646045 R ATP binding protein complement(2645017..2646045) Listeria monocytogenes serotype 4b str. CLIP 80459 7702460 YP_002759244.1 CDS Lm4b_02558 NC_012488.1 2646314 2647840 D N-acetylmuramoyl-L-alanine amidase 2646314..2647840 Listeria monocytogenes serotype 4b str. CLIP 80459 7702725 YP_002759245.1 CDS Lm4b_02559 NC_012488.1 2647881 2648732 R oxidoreductase, aldo/keto reductase family complement(2647881..2648732) Listeria monocytogenes serotype 4b str. CLIP 80459 7702726 YP_002759246.1 CDS Lm4b_02560 NC_012488.1 2648754 2649176 R transcription regulator (MerR family) complement(2648754..2649176) Listeria monocytogenes serotype 4b str. CLIP 80459 7702727 YP_002759247.1 CDS Lm4b_02561 NC_012488.1 2649298 2649624 R hypothetical protein complement(2649298..2649624) Listeria monocytogenes serotype 4b str. CLIP 80459 7702728 YP_002759248.1 CDS Lm4b_02562 NC_012488.1 2649745 2650614 D hypothetical protein 2649745..2650614 Listeria monocytogenes serotype 4b str. CLIP 80459 7702729 YP_002759249.1 CDS rpsI NC_012488.1 2650756 2651148 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(2650756..2651148) Listeria monocytogenes serotype 4b str. CLIP 80459 7702730 YP_002759250.1 CDS rplM NC_012488.1 2651170 2651607 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(2651170..2651607) Listeria monocytogenes serotype 4b str. CLIP 80459 7702442 YP_002759251.1 CDS truA NC_012488.1 2651802 2652548 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(2651802..2652548) Listeria monocytogenes serotype 4b str. CLIP 80459 7702410 YP_002759252.1 CDS Lm4b_02566 NC_012488.1 2652554 2653351 R cobalt ABC transporter, permease protein complement(2652554..2653351) Listeria monocytogenes serotype 4b str. CLIP 80459 7701616 YP_002759253.1 CDS cbiO NC_012488.1 2653354 2654220 R with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene; cobalt transporter ATP-binding subunit complement(2653354..2654220) Listeria monocytogenes serotype 4b str. CLIP 80459 7702731 YP_002759254.1 CDS cbiO NC_012488.1 2654196 2655035 R with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene; cobalt transporter ATP-binding subunit complement(2654196..2655035) Listeria monocytogenes serotype 4b str. CLIP 80459 7702732 YP_002759255.1 CDS Lm4b_02569 NC_012488.1 2655166 2655828 D hypothetical protein 2655166..2655828 Listeria monocytogenes serotype 4b str. CLIP 80459 7702733 YP_002759256.1 CDS Lm4b_02570 NC_012488.1 2655949 2656839 D acetamidase 2655949..2656839 Listeria monocytogenes serotype 4b str. CLIP 80459 7702734 YP_002759257.1 CDS Lm4b_02571 NC_012488.1 2656871 2657965 R hypothetical protein complement(2656871..2657965) Listeria monocytogenes serotype 4b str. CLIP 80459 7702735 YP_002759258.1 CDS rplQ NC_012488.1 2658180 2658587 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(2658180..2658587) Listeria monocytogenes serotype 4b str. CLIP 80459 7702736 YP_002759259.1 CDS rpoA NC_012488.1 2658604 2659548 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(2658604..2659548) Listeria monocytogenes serotype 4b str. CLIP 80459 7702414 YP_002759260.1 CDS rpsK NC_012488.1 2659658 2660047 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(2659658..2660047) Listeria monocytogenes serotype 4b str. CLIP 80459 7702431 YP_002759261.1 CDS rpsM NC_012488.1 2660070 2660435 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(2660070..2660435) Listeria monocytogenes serotype 4b str. CLIP 80459 7702444 YP_002759262.1 CDS infA NC_012488.1 2660671 2660889 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(2660671..2660889) Listeria monocytogenes serotype 4b str. CLIP 80459 7702446 YP_002759263.1 CDS adk NC_012488.1 2661276 2661923 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(2661276..2661923) Listeria monocytogenes serotype 4b str. CLIP 80459 7702509 YP_002759264.1 CDS secY NC_012488.1 2661983 2663278 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(2661983..2663278) Listeria monocytogenes serotype 4b str. CLIP 80459 7704362 YP_002759265.1 CDS rplO NC_012488.1 2663278 2663718 R late assembly protein; 50S ribosomal protein L15 complement(2663278..2663718) Listeria monocytogenes serotype 4b str. CLIP 80459 7701581 YP_002759266.1 CDS rpmD NC_012488.1 2663774 2663953 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(2663774..2663953) Listeria monocytogenes serotype 4b str. CLIP 80459 7702412 YP_002759267.1 CDS rpsE NC_012488.1 2663970 2664473 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(2663970..2664473) Listeria monocytogenes serotype 4b str. CLIP 80459 7702425 YP_002759268.1 CDS rplR NC_012488.1 2664495 2664854 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(2664495..2664854) Listeria monocytogenes serotype 4b str. CLIP 80459 7702438 YP_002759269.1 CDS rplF NC_012488.1 2664894 2665430 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(2664894..2665430) Listeria monocytogenes serotype 4b str. CLIP 80459 7702415 YP_002759270.1 CDS rpsH NC_012488.1 2665461 2665859 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(2665461..2665859) Listeria monocytogenes serotype 4b str. CLIP 80459 7702405 YP_002759271.1 CDS rpsN NC_012488.1 2665890 2666075 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 complement(2665890..2666075) Listeria monocytogenes serotype 4b str. CLIP 80459 7702441 YP_002759272.1 CDS rplE NC_012488.1 2666107 2666646 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(2666107..2666646) Listeria monocytogenes serotype 4b str. CLIP 80459 7702447 YP_002759273.1 CDS rplX NC_012488.1 2666673 2666984 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(2666673..2666984) Listeria monocytogenes serotype 4b str. CLIP 80459 7702404 YP_002759274.1 CDS rplN NC_012488.1 2667022 2667390 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(2667022..2667390) Listeria monocytogenes serotype 4b str. CLIP 80459 7702421 YP_002759275.1 CDS rpsQ NC_012488.1 2667470 2667733 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(2667470..2667733) Listeria monocytogenes serotype 4b str. CLIP 80459 7702411 YP_002759276.1 CDS rpmC NC_012488.1 2667761 2667952 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(2667761..2667952) Listeria monocytogenes serotype 4b str. CLIP 80459 7702450 YP_002759277.1 CDS rplP NC_012488.1 2667942 2668376 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(2667942..2668376) Listeria monocytogenes serotype 4b str. CLIP 80459 7702424 YP_002759278.1 CDS rpsC NC_012488.1 2668379 2669035 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(2668379..2669035) Listeria monocytogenes serotype 4b str. CLIP 80459 7702413 YP_002759279.1 CDS rplV NC_012488.1 2669039 2669395 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(2669039..2669395) Listeria monocytogenes serotype 4b str. CLIP 80459 7702436 YP_002759280.1 CDS rpsS NC_012488.1 2669416 2669694 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(2669416..2669694) Listeria monocytogenes serotype 4b str. CLIP 80459 7702419 YP_002759281.1 CDS rplB NC_012488.1 2669782 2670615 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(2669782..2670615) Listeria monocytogenes serotype 4b str. CLIP 80459 7702452 YP_002759282.1 CDS rplW NC_012488.1 2670656 2670940 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(2670656..2670940) Listeria monocytogenes serotype 4b str. CLIP 80459 7702601 YP_002759283.1 CDS rplD NC_012488.1 2670940 2671563 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(2670940..2671563) Listeria monocytogenes serotype 4b str. CLIP 80459 7702420 YP_002759284.1 CDS rplC NC_012488.1 2671589 2672218 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(2671589..2672218) Listeria monocytogenes serotype 4b str. CLIP 80459 7702603 YP_002759285.1 CDS rpsJ NC_012488.1 2672253 2672561 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(2672253..2672561) Listeria monocytogenes serotype 4b str. CLIP 80459 7702602 YP_002759286.1 CDS Lm4b_02601 NC_012488.1 2672923 2673723 R Cobalt transport protein complement(2672923..2673723) Listeria monocytogenes serotype 4b str. CLIP 80459 7702443 YP_002759287.1 CDS Lm4b_02602 NC_012488.1 2673744 2674703 R catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase complement(2673744..2674703) Listeria monocytogenes serotype 4b str. CLIP 80459 7702737 YP_002759288.1 CDS Lm4b_02603 NC_012488.1 2674785 2675867 R lipoprotein ApbE involved in thiamine biosynthesis complement(2674785..2675867) Listeria monocytogenes serotype 4b str. CLIP 80459 7702738 YP_002759289.1 CDS Lm4b_02604 NC_012488.1 2676031 2676930 R Conserved lipoprotein complement(2676031..2676930) Listeria monocytogenes serotype 4b str. CLIP 80459 7702739 YP_002759290.1 CDS Lm4b_02605 NC_012488.1 2677378 2679264 D NADH dehydrogenase 2677378..2679264 Listeria monocytogenes serotype 4b str. CLIP 80459 7702740 YP_002759291.1 CDS Lm4b_02606 NC_012488.1 2679440 2679874 D hypothetical protein 2679440..2679874 Listeria monocytogenes serotype 4b str. CLIP 80459 7702741 YP_002759292.1 CDS Lm4b_02607 NC_012488.1 2679907 2680449 D hypothetical protein 2679907..2680449 Listeria monocytogenes serotype 4b str. CLIP 80459 7702742 YP_002759293.1 CDS Lm4b_02608 NC_012488.1 2680471 2681451 D heptaprenyl diphosphate synthase component II 2680471..2681451 Listeria monocytogenes serotype 4b str. CLIP 80459 7702743 YP_002759294.1 CDS Lm4b_02609 NC_012488.1 2681541 2682872 D hypothetical protein 2681541..2682872 Listeria monocytogenes serotype 4b str. CLIP 80459 7702744 YP_002759295.1 CDS Lm4b_02610 NC_012488.1 2682919 2683905 R hypothetical protein complement(2682919..2683905) Listeria monocytogenes serotype 4b str. CLIP 80459 7702745 YP_002759296.1 CDS Lm4b_02611 NC_012488.1 2684011 2684754 R hypothetical protein complement(2684011..2684754) Listeria monocytogenes serotype 4b str. CLIP 80459 7702746 YP_002759297.1 CDS Lm4b_02612 NC_012488.1 2684755 2685474 R hypothetical protein complement(2684755..2685474) Listeria monocytogenes serotype 4b str. CLIP 80459 7702747 YP_002759298.1 CDS Lm4b_02613 NC_012488.1 2685434 2686183 R creatinine amidohydrolase complement(2685434..2686183) Listeria monocytogenes serotype 4b str. CLIP 80459 7702748 YP_002759299.1 CDS Lm4b_02614 NC_012488.1 2686196 2687188 R Phosphotriesterase complement(2686196..2687188) Listeria monocytogenes serotype 4b str. CLIP 80459 7702749 YP_002759300.1 CDS ulaA NC_012488.1 2687258 2688556 R membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC complement(2687258..2688556) Listeria monocytogenes serotype 4b str. CLIP 80459 7702750 YP_002759301.1 CDS Lm4b_02616 NC_012488.1 2688583 2688855 R hypothetical PTS enzyme IIB component complement(2688583..2688855) Listeria monocytogenes serotype 4b str. CLIP 80459 7702751 YP_002759302.1 CDS Lm4b_02617 NC_012488.1 2688858 2689292 R mannitol-specific PTS enzyme IIA component complement(2688858..2689292) Listeria monocytogenes serotype 4b str. CLIP 80459 7702752 YP_002759303.1 CDS Lm4b_02618 NC_012488.1 2689485 2691551 R transcriptional antiterminator complement(2689485..2691551) Listeria monocytogenes serotype 4b str. CLIP 80459 7702753 YP_002759304.1 CDS Lm4b_02619b NC_012488.1 2691706 2692188 R hypothetical protein complement(2691706..2692188) Listeria monocytogenes serotype 4b str. CLIP 80459 7702754 YP_002759305.1 CDS Lm4b_02620 NC_012488.1 2692185 2692829 R ABC transporter ATP-binding protein complement(2692185..2692829) Listeria monocytogenes serotype 4b str. CLIP 80459 7702755 YP_002759306.1 CDS Lm4b_02621b NC_012488.1 2692841 2693590 R hypothetical protein complement(2692841..2693590) Listeria monocytogenes serotype 4b str. CLIP 80459 7702756 YP_002759307.1 CDS Lm4b_02622b NC_012488.1 2693592 2694290 R hypothetical protein complement(2693592..2694290) Listeria monocytogenes serotype 4b str. CLIP 80459 7702758 YP_002759308.1 CDS Lm4b_02623 NC_012488.1 2694277 2695062 R membrane-spanning permease complement(2694277..2695062) Listeria monocytogenes serotype 4b str. CLIP 80459 7702759 YP_002759309.1 CDS Lm4b_02624 NC_012488.1 2695128 2695535 R hypothetical protein complement(2695128..2695535) Listeria monocytogenes serotype 4b str. CLIP 80459 7702761 YP_002759310.1 CDS tufA NC_012488.1 2695720 2696907 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(2695720..2696907) Listeria monocytogenes serotype 4b str. CLIP 80459 7702763 YP_002759311.1 CDS fus NC_012488.1 2697016 2699103 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(2697016..2699103) Listeria monocytogenes serotype 4b str. CLIP 80459 7701621 YP_002759312.1 CDS rpsG NC_012488.1 2699169 2699639 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(2699169..2699639) Listeria monocytogenes serotype 4b str. CLIP 80459 7702923 YP_002759313.1 CDS rpsL NC_012488.1 2699670 2700083 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(2699670..2700083) Listeria monocytogenes serotype 4b str. CLIP 80459 7702440 YP_002759314.1 CDS Lm4b_02629 NC_012488.1 2700276 2701673 R dGTPase family type 3 subfamily, presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(2700276..2701673) Listeria monocytogenes serotype 4b str. CLIP 80459 7702445 YP_002759315.1 CDS Lm4b_02630 NC_012488.1 2701689 2702168 R spermidine/spermine N1-acetyl transferase complement(2701689..2702168) Listeria monocytogenes serotype 4b str. CLIP 80459 7702764 YP_002759316.1 CDS Lm4b_02631 NC_012488.1 2702329 2703798 D peptidoglycan bound protein (LPXTG motif) 2702329..2703798 Listeria monocytogenes serotype 4b str. CLIP 80459 7702765 YP_002759317.1 CDS Lm4b_02632 NC_012488.1 2703854 2704498 R ribulose-phosphate 3-epimerase complement(2703854..2704498) Listeria monocytogenes serotype 4b str. CLIP 80459 7702766 YP_002759318.1 CDS Lm4b_02633 NC_012488.1 2704495 2706510 R transketolase complement(2704495..2706510) Listeria monocytogenes serotype 4b str. CLIP 80459 7702767 YP_002759319.1 CDS Lm4b_02634 NC_012488.1 2706544 2707218 R ribulose-5-phosphate 3-epimerase complement(2706544..2707218) Listeria monocytogenes serotype 4b str. CLIP 80459 7702768 YP_002759320.1 CDS Lm4b_02635 NC_012488.1 2707227 2707667 R ribose 5-phosphate epimerase complement(2707227..2707667) Listeria monocytogenes serotype 4b str. CLIP 80459 7702769 YP_002759321.1 CDS Lm4b_02636 NC_012488.1 2707862 2708893 R polyol dehydrogenase complement(2707862..2708893) Listeria monocytogenes serotype 4b str. CLIP 80459 7702770 YP_002759322.1 CDS Lm4b_02637 NC_012488.1 2708895 2709947 R sorbitol dehydrogenase complement(2708895..2709947) Listeria monocytogenes serotype 4b str. CLIP 80459 7702771 YP_002759323.1 CDS Lm4b_02638 NC_012488.1 2709984 2711255 R PTS system galactitol-specific enzyme IIC component complement(2709984..2711255) Listeria monocytogenes serotype 4b str. CLIP 80459 7702772 YP_002759324.1 CDS Lm4b_02639 NC_012488.1 2711316 2711597 R PTS system galactitol-specific enzyme IIB component complement(2711316..2711597) Listeria monocytogenes serotype 4b str. CLIP 80459 7702773 YP_002759325.1 CDS Lm4b_02640 NC_012488.1 2711655 2712119 R PTS system galactitol-specific enzyme IIA component complement(2711655..2712119) Listeria monocytogenes serotype 4b str. CLIP 80459 7702774 YP_002759326.1 CDS Lm4b_02641 NC_012488.1 2712153 2714222 R transcriptional antiterminator (BglG family) complement(2712153..2714222) Listeria monocytogenes serotype 4b str. CLIP 80459 7702775 YP_002759327.1 CDS Lm4b_02642 NC_012488.1 2714592 2715404 R hypothetical protein complement(2714592..2715404) Listeria monocytogenes serotype 4b str. CLIP 80459 7702776 YP_002759328.1 CDS Lm4b_02643 NC_012488.1 2715478 2715840 R hypothetical protein complement(2715478..2715840) Listeria monocytogenes serotype 4b str. CLIP 80459 7702777 YP_002759329.1 CDS Lm4b_02644 NC_012488.1 2715837 2716205 R hypothetical protein complement(2715837..2716205) Listeria monocytogenes serotype 4b str. CLIP 80459 7702778 YP_002759330.1 CDS Lm4b_02645 NC_012488.1 2716251 2717057 R transcription regulator complement(2716251..2717057) Listeria monocytogenes serotype 4b str. CLIP 80459 7702779 YP_002759331.1 CDS Lm4b_02646 NC_012488.1 2717173 2717643 D hypothetical protein 2717173..2717643 Listeria monocytogenes serotype 4b str. CLIP 80459 7702780 YP_002759332.1 CDS Lm4b_02647 NC_012488.1 2717689 2718144 D catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 2717689..2718144 Listeria monocytogenes serotype 4b str. CLIP 80459 7702781 YP_002759333.1 CDS Lm4b_02648 NC_012488.1 2718343 2718684 D hypothetical protein 2718343..2718684 Listeria monocytogenes serotype 4b str. CLIP 80459 7702782 YP_002759334.1 CDS Lm4b_02649 NC_012488.1 2718697 2719953 D UV-damage repair protein 2718697..2719953 Listeria monocytogenes serotype 4b str. CLIP 80459 7702783 YP_002759335.1 CDS Lm4b_02650 NC_012488.1 2719955 2720767 R hydrolase (esterase) complement(2719955..2720767) Listeria monocytogenes serotype 4b str. CLIP 80459 7702784 YP_002759336.1 CDS Lm4b_02651 NC_012488.1 2720808 2721503 R two components response regulator KdpE complement(2720808..2721503) Listeria monocytogenes serotype 4b str. CLIP 80459 7702785 YP_002759337.1 CDS Lm4b_02652 NC_012488.1 2721500 2724190 R the two components sensor protein kdpD complement(2721500..2724190) Listeria monocytogenes serotype 4b str. CLIP 80459 7702786 YP_002759338.1 CDS kdpC NC_012488.1 2724206 2724778 R potassium-transporting atpase c chain complement(2724206..2724778) Listeria monocytogenes serotype 4b str. CLIP 80459 7702787 YP_002759339.1 CDS kdpB NC_012488.1 2724793 2726838 R One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B complement(2724793..2726838) Listeria monocytogenes serotype 4b str. CLIP 80459 7702522 YP_002759340.1 CDS kdpA NC_012488.1 2726850 2728535 R catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A complement(2726850..2728535) Listeria monocytogenes serotype 4b str. CLIP 80459 7702521 YP_002759341.1 CDS Lm4b_02656 NC_012488.1 2728875 2729180 D cellobiose phosphotransferase enzyme IIB component 2728875..2729180 Listeria monocytogenes serotype 4b str. CLIP 80459 7702520 YP_002759342.1 CDS Lm4b_02657 NC_012488.1 2729315 2730622 D cellobiose phosphotransferase enzyme IIC component 2729315..2730622 Listeria monocytogenes serotype 4b str. CLIP 80459 7702788 YP_002759343.1 CDS Lm4b_02658 NC_012488.1 2730659 2730961 D cellobiose phosphotransferase enzyme IIA component 2730659..2730961 Listeria monocytogenes serotype 4b str. CLIP 80459 7702789 YP_002759344.1 CDS Lm4b_02659 NC_012488.1 2730983 2732104 R cell division protein FtsW complement(2730983..2732104) Listeria monocytogenes serotype 4b str. CLIP 80459 7702790 YP_002759345.1 CDS Lm4b_02660 NC_012488.1 2732101 2733231 R cell division protein FtsW complement(2732101..2733231) Listeria monocytogenes serotype 4b str. CLIP 80459 7702791 YP_002759346.1 CDS Lm4b_02661 NC_012488.1 2733232 2735802 R Mg2+ transport ATPase complement(2733232..2735802) Listeria monocytogenes serotype 4b str. CLIP 80459 7702792 YP_002759347.1 CDS Lm4b_02662 NC_012488.1 2735878 2736324 D hypothetical protein 2735878..2736324 Listeria monocytogenes serotype 4b str. CLIP 80459 7702793 YP_002759348.1 CDS Lm4b_02663 NC_012488.1 2736356 2736922 R TetR family transcriptional regulator complement(2736356..2736922) Listeria monocytogenes serotype 4b str. CLIP 80459 7702794 YP_002759349.1 CDS Lm4b_02664 NC_012488.1 2737084 2738859 D cell wall hydrolase; muramidase-2 like protein in Enterococcus faecalis; in Enterococcus faecalis a mutant in this gene has no effect on virulence in mouse models; Listeria monocytogenes MurA in involved in general autolysis; contains an N-terminal muramidase domain and C-terminal LysM repeats for cell wall-anchoring; autolysin 2737084..2738859 Listeria monocytogenes serotype 4b str. CLIP 80459 7702795 YP_002759350.1 CDS Lm4b_02665 NC_012488.1 2739090 2739419 R hypothetical protein complement(2739090..2739419) Listeria monocytogenes serotype 4b str. CLIP 80459 7702796 YP_002759351.1 CDS tmk NC_012488.1 2739528 2740154 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(2739528..2740154) Listeria monocytogenes serotype 4b str. CLIP 80459 7702797 YP_002759352.1 CDS Lm4b_02667 NC_012488.1 2740207 2741586 R lysine decarboxylase complement(2740207..2741586) Listeria monocytogenes serotype 4b str. CLIP 80459 7702798 YP_002759353.1 CDS Lm4b_02668 NC_012488.1 2741770 2742759 D with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 2741770..2742759 Listeria monocytogenes serotype 4b str. CLIP 80459 7702799 YP_002759354.1 CDS Lm4b_02669 NC_012488.1 2742781 2743377 D hypothetical dihydroxyacetone kinase 2742781..2743377 Listeria monocytogenes serotype 4b str. CLIP 80459 7703446 YP_002759355.1 CDS Lm4b_02670 NC_012488.1 2743381 2743755 D phosphotransferase mannnose-specific family component IIA 2743381..2743755 Listeria monocytogenes serotype 4b str. CLIP 80459 7703447 YP_002759356.1 CDS Lm4b_02671 NC_012488.1 2743861 2744712 D transcription regulator 2743861..2744712 Listeria monocytogenes serotype 4b str. CLIP 80459 7703448 YP_002759357.1 CDS Lm4b_02672 NC_012488.1 2744831 2745670 D hypothetical protein 2744831..2745670 Listeria monocytogenes serotype 4b str. CLIP 80459 7703449 YP_002759358.1 CDS Lm4b_02673 NC_012488.1 2745697 2746143 R hypothetical protein complement(2745697..2746143) Listeria monocytogenes serotype 4b str. CLIP 80459 7703450 YP_002759359.1 CDS Lm4b_02674 NC_012488.1 2746259 2747101 D aldo/keto reductase 2746259..2747101 Listeria monocytogenes serotype 4b str. CLIP 80459 7703451 YP_002759360.1 CDS Lm4b_02675 NC_012488.1 2747147 2747392 R hypothetical protein complement(2747147..2747392) Listeria monocytogenes serotype 4b str. CLIP 80459 7703452 YP_002759361.1 CDS recR NC_012488.1 2747407 2748003 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(2747407..2748003) Listeria monocytogenes serotype 4b str. CLIP 80459 7703453 YP_002759362.1 CDS Lm4b_02677 NC_012488.1 2748112 2748429 R hypothetical protein complement(2748112..2748429) Listeria monocytogenes serotype 4b str. CLIP 80459 7702588 YP_002759363.1 CDS dnaX NC_012488.1 2748459 2750198 R DNA polymerase III (gamma and tau subunits) complement(2748459..2750198) Listeria monocytogenes serotype 4b str. CLIP 80459 7703454 YP_002759364.1 CDS Lm4b_02679 NC_012488.1 2750447 2750911 R hypothetical protein complement(2750447..2750911) Listeria monocytogenes serotype 4b str. CLIP 80459 7702889 YP_002759365.1 CDS Lm4b_02680 NC_012488.1 2750929 2751111 R hypothetical protein complement(2750929..2751111) Listeria monocytogenes serotype 4b str. CLIP 80459 7703455 YP_002759366.1 CDS Lm4b_02681 NC_012488.1 2751114 2751335 R hypothetical protein complement(2751114..2751335) Listeria monocytogenes serotype 4b str. CLIP 80459 7703456 YP_002759367.1 CDS Lm4b_02682 NC_012488.1 2751470 2752834 R PTS system, cellobiose-specific enzyme IIC complement(2751470..2752834) Listeria monocytogenes serotype 4b str. CLIP 80459 7703457 YP_002759368.1 CDS Lm4b_02828 NC_012488.1 2753275 2753430 D hypothetical protein 2753275..2753430 Listeria monocytogenes serotype 4b str. CLIP 80459 7703458 YP_002759369.1 CDS Lm4b_02684 NC_012488.1 2753462 2754103 R hypothetical protein complement(2753462..2754103) Listeria monocytogenes serotype 4b str. CLIP 80459 7703429 YP_002759370.1 CDS Lm4b_02686 NC_012488.1 2754799 2756313 R gluconate kinase complement(2754799..2756313) Listeria monocytogenes serotype 4b str. CLIP 80459 7703460 YP_002759371.1 CDS Lm4b_02687 NC_012488.1 2756426 2757364 R Secreted protein with 1 GW repeat complement(2756426..2757364) Listeria monocytogenes serotype 4b str. CLIP 80459 7703461 YP_002759372.1 CDS Lm4b_02688 NC_012488.1 2757407 2758354 R Peptidoglycan anchored protein (LPXTG motif) complement(2757407..2758354) Listeria monocytogenes serotype 4b str. CLIP 80459 7703462 YP_002759373.1 CDS cydD NC_012488.1 2758497 2760236 R ABC transporter ATP-binding protein complement(2758497..2760236) Listeria monocytogenes serotype 4b str. CLIP 80459 7703463 YP_002759374.1 CDS cydC NC_012488.1 2760236 2761960 R ABC transporter required for expression of cytochrome BD complement(2760236..2761960) Listeria monocytogenes serotype 4b str. CLIP 80459 7703268 YP_002759375.1 CDS cydB NC_012488.1 2761960 2762973 R cytochrome D ubiquinol oxidase subunit II complement(2761960..2762973) Listeria monocytogenes serotype 4b str. CLIP 80459 7703267 YP_002759376.1 CDS cydA NC_012488.1 2762960 2764366 R cytochrome D ubiquinol oxidase subunit I complement(2762960..2764366) Listeria monocytogenes serotype 4b str. CLIP 80459 7703266 YP_002759377.1 CDS Lm4b_02693 NC_012488.1 2764748 2765218 R hypothetical protein complement(2764748..2765218) Listeria monocytogenes serotype 4b str. CLIP 80459 7703265 YP_002759378.1 CDS Lm4b_02694 NC_012488.1 2765413 2766990 D acetate-CoA ligase 2765413..2766990 Listeria monocytogenes serotype 4b str. CLIP 80459 7703464 YP_002759379.1 CDS Lm4b_02695 NC_012488.1 2767032 2767751 R putative 6-phosphogluconolactonase complement(2767032..2767751) Listeria monocytogenes serotype 4b str. CLIP 80459 7703465 YP_002759380.1 CDS Lm4b_02696 NC_012488.1 2767831 2768565 D merR-family transcriptional regulator 2767831..2768565 Listeria monocytogenes serotype 4b str. CLIP 80459 7703466 YP_002759381.1 CDS Lm4b_02697 NC_012488.1 2768619 2769080 D hypothetical protein 2768619..2769080 Listeria monocytogenes serotype 4b str. CLIP 80459 7703467 YP_002759382.1 CDS Lm4b_02698 NC_012488.1 2769100 2769543 R hypothetical protein complement(2769100..2769543) Listeria monocytogenes serotype 4b str. CLIP 80459 7703468 YP_002759383.1 CDS Lm4b_02699 NC_012488.1 2769601 2770953 R hypothetical protein complement(2769601..2770953) Listeria monocytogenes serotype 4b str. CLIP 80459 7703469 YP_002759384.1 CDS Lm4b_02700 NC_012488.1 2770950 2771399 R transcription regulator complement(2770950..2771399) Listeria monocytogenes serotype 4b str. CLIP 80459 7703470 YP_002759385.1 CDS Lm4b_02701 NC_012488.1 2771569 2772450 D hypothetical protein 2771569..2772450 Listeria monocytogenes serotype 4b str. CLIP 80459 7703471 YP_002759386.1 CDS Lm4b_02702 NC_012488.1 2772535 2772990 D transcription regulator 2772535..2772990 Listeria monocytogenes serotype 4b str. CLIP 80459 7703472 YP_002759387.1 CDS Lm4b_02703 NC_012488.1 2772990 2773394 D hypothetical protein 2772990..2773394 Listeria monocytogenes serotype 4b str. CLIP 80459 7703473 YP_002759388.1 CDS Lm4b_02704 NC_012488.1 2773437 2774048 R phosphatase complement(2773437..2774048) Listeria monocytogenes serotype 4b str. CLIP 80459 7703474 YP_002759389.1 CDS Lm4b_02705 NC_012488.1 2774062 2774430 R transcription regulator (RpiR family) complement(2774062..2774430) Listeria monocytogenes serotype 4b str. CLIP 80459 7703475 YP_002759390.1 CDS Lm4b_02706 NC_012488.1 2774513 2775265 R hypothetical protein complement(2774513..2775265) Listeria monocytogenes serotype 4b str. CLIP 80459 7703476 YP_002759391.1 CDS Lm4b_02707 NC_012488.1 2775431 2777389 D PTS system, fructose-specific IIABC component 2775431..2777389 Listeria monocytogenes serotype 4b str. CLIP 80459 7703477 YP_002759392.1 CDS Lm4b_02708 NC_012488.1 2777450 2780098 D sugar hydrolase 2777450..2780098 Listeria monocytogenes serotype 4b str. CLIP 80459 7703478 YP_002759393.1 CDS Lm4b_02709b NC_012488.1 2780100 2781782 D Sucrose phosphorylase 2780100..2781782 Listeria monocytogenes serotype 4b str. CLIP 80459 7703479 YP_002759394.1 CDS Lm4b_02710 NC_012488.1 2781779 2782912 D hypothetical protein 2781779..2782912 Listeria monocytogenes serotype 4b str. CLIP 80459 7703480 YP_002759395.1 CDS Lm4b_02711 NC_012488.1 2782917 2783873 R transcriptional regulator (LacI family) complement(2782917..2783873) Listeria monocytogenes serotype 4b str. CLIP 80459 7703481 YP_002759396.1 CDS Lm4b_02712 NC_012488.1 2783941 2785275 R CBS domain-containing protein complement(2783941..2785275) Listeria monocytogenes serotype 4b str. CLIP 80459 7703483 YP_002759397.1 CDS Lm4b_02713 NC_012488.1 2785393 2786082 R Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase complement(2785393..2786082) Listeria monocytogenes serotype 4b str. CLIP 80459 7703484 YP_002759398.1 CDS Lm4b_02714 NC_012488.1 2786075 2786365 R hypothetical protein complement(2786075..2786365) Listeria monocytogenes serotype 4b str. CLIP 80459 7703485 YP_002759399.1 CDS Lm4b_02715 NC_012488.1 2786355 2787563 R drug-efflux transporter complement(2786355..2787563) Listeria monocytogenes serotype 4b str. CLIP 80459 7703486 YP_002759400.1 CDS Lm4b_02716 NC_012488.1 2787680 2788027 R hypothetical protein complement(2787680..2788027) Listeria monocytogenes serotype 4b str. CLIP 80459 7703487 YP_002759401.1 CDS Lm4b_02717 NC_012488.1 2788046 2788690 R similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; putative translaldolase complement(2788046..2788690) Listeria monocytogenes serotype 4b str. CLIP 80459 7703488 YP_002759402.1 CDS Lm4b_02718 NC_012488.1 2788832 2789521 R transcription regulator CRP/FNR family complement(2788832..2789521) Listeria monocytogenes serotype 4b str. CLIP 80459 7703489 YP_002759403.1 CDS Lm4b_02719 NC_012488.1 2789851 2791578 D ABC transporter ATP-binding protein 2789851..2791578 Listeria monocytogenes serotype 4b str. CLIP 80459 7703490 YP_002759404.1 CDS Lm4b_02720 NC_012488.1 2791632 2791883 R hypothetical protein complement(2791632..2791883) Listeria monocytogenes serotype 4b str. CLIP 80459 7703491 YP_002759405.1 CDS serS NC_012488.1 2791903 2793186 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(2791903..2793186) Listeria monocytogenes serotype 4b str. CLIP 80459 7703492 YP_002759406.1 CDS Lm4b_02722 NC_012488.1 2793520 2793939 R stress protein YdaG complement(2793520..2793939) Listeria monocytogenes serotype 4b str. CLIP 80459 7701584 YP_002759407.1 CDS Lm4b_02723 NC_012488.1 2794069 2794641 D glutamine amidotransferase 2794069..2794641 Listeria monocytogenes serotype 4b str. CLIP 80459 7703493 YP_002759408.1 CDS Lm4b_02724 NC_012488.1 2794638 2796344 D para-aminobenzoate synthase component I 2794638..2796344 Listeria monocytogenes serotype 4b str. CLIP 80459 7703494 YP_002759409.1 CDS Lm4b_02725 NC_012488.1 2796506 2798227 D ABC transporter ATP-binding protein 2796506..2798227 Listeria monocytogenes serotype 4b str. CLIP 80459 7703495 YP_002759410.1 CDS Lm4b_02726 NC_012488.1 2798227 2799999 D ABC transporter ATP-binding protein 2798227..2799999 Listeria monocytogenes serotype 4b str. CLIP 80459 7703496 YP_002759411.1 CDS gltA NC_012488.1 2800179 2802032 D hypothetical protein 2800179..2802032 Listeria monocytogenes serotype 4b str. CLIP 80459 7703497 YP_002759412.1 CDS gltB NC_012488.1 2802043 2802990 D glycosyltransferase 2802043..2802990 Listeria monocytogenes serotype 4b str. CLIP 80459 7702940 YP_002759413.1 CDS Lm4b_02729 NC_012488.1 2803071 2804408 R D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) complement(2803071..2804408) Listeria monocytogenes serotype 4b str. CLIP 80459 7702941 YP_002759414.1 CDS Lm4b_02730 NC_012488.1 2804587 2806254 R acylase and diesterase complement(2804587..2806254) Listeria monocytogenes serotype 4b str. CLIP 80459 7703498 YP_002759415.1 CDS topB NC_012488.1 2806363 2808516 R decatenates replicating daughter chromosomes; DNA topoisomerase III complement(2806363..2808516) Listeria monocytogenes serotype 4b str. CLIP 80459 7703499 YP_002759416.1 CDS Lm4b_02732 NC_012488.1 2808540 2810312 R ATP-dependent DNA helicase complement(2808540..2810312) Listeria monocytogenes serotype 4b str. CLIP 80459 7701605 YP_002759417.1 CDS guaB NC_012488.1 2810473 2811939 R inosine-monophosphate dehydrogenase complement(2810473..2811939) Listeria monocytogenes serotype 4b str. CLIP 80459 7703500 YP_002759418.1 CDS Lm4b_02734 NC_012488.1 2812227 2812757 R hypothetical protein complement(2812227..2812757) Listeria monocytogenes serotype 4b str. CLIP 80459 7702954 YP_002759419.1 CDS Lm4b_02735 NC_012488.1 2812815 2814425 R ABC transporter ATP-binding protein complement(2812815..2814425) Listeria monocytogenes serotype 4b str. CLIP 80459 7703501 YP_002759420.1 CDS Lm4b_02736 NC_012488.1 2814943 2816397 D beta-glucosidase 2814943..2816397 Listeria monocytogenes serotype 4b str. CLIP 80459 7703502 YP_002759421.1 CDS Lm4b_02737 NC_012488.1 2816441 2816743 D PTS cellobiose-specific enzyme IIB 2816441..2816743 Listeria monocytogenes serotype 4b str. CLIP 80459 7703503 YP_002759422.1 CDS Lm4b_02738 NC_012488.1 2816776 2818128 D PTS cellobiose-specific enzyme IIC 2816776..2818128 Listeria monocytogenes serotype 4b str. CLIP 80459 7703504 YP_002759423.1 CDS Lm4b_02739 NC_012488.1 2818140 2819024 D xylose operon regulatory protein and to glucose kinase 2818140..2819024 Listeria monocytogenes serotype 4b str. CLIP 80459 7703505 YP_002759424.1 CDS Lm4b_02740 NC_012488.1 2819017 2819325 D PTS cellobiose-specific enzyme IIA 2819017..2819325 Listeria monocytogenes serotype 4b str. CLIP 80459 7703506 YP_002759425.1 CDS Lm4b_02741 NC_012488.1 2819361 2820098 R transcriptional regulator complement(2819361..2820098) Listeria monocytogenes serotype 4b str. CLIP 80459 7703507 YP_002759426.1 CDS Lm4b_02742 NC_012488.1 2820199 2820861 R hypothetical protein complement(2820199..2820861) Listeria monocytogenes serotype 4b str. CLIP 80459 7703508 YP_002759427.1 CDS Lm4b_02743 NC_012488.1 2820932 2822062 R Hypothetical membrane protein complement(2820932..2822062) Listeria monocytogenes serotype 4b str. CLIP 80459 7703509 YP_002759428.1 CDS Lm4b_02744 NC_012488.1 2822089 2822976 R ABC transporter ATP-binding protein complement(2822089..2822976) Listeria monocytogenes serotype 4b str. CLIP 80459 7703510 YP_002759429.1 CDS Lm4b_02745 NC_012488.1 2823146 2825476 D Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; bifunctional glutamate--cysteine ligase/glutathione synthetase 2823146..2825476 Listeria monocytogenes serotype 4b str. CLIP 80459 7703511 YP_002759430.1 CDS Lm4b_02746 NC_012488.1 2825516 2826964 R beta-glucosidase complement(2825516..2826964) Listeria monocytogenes serotype 4b str. CLIP 80459 7703512 YP_002759431.1 CDS Lm4b_02747 NC_012488.1 2826957 2828810 R PTS beta-glucoside-specific enzyme II ABC complement(2826957..2828810) Listeria monocytogenes serotype 4b str. CLIP 80459 7703513 YP_002759432.1 CDS Lm4b_02748 NC_012488.1 2828910 2829746 R transcription antiterminator complement(2828910..2829746) Listeria monocytogenes serotype 4b str. CLIP 80459 7703514 YP_002759433.1 CDS Lm4b_02749 NC_012488.1 2830111 2830734 R ABC transporter ATP-binding protein complement(2830111..2830734) Listeria monocytogenes serotype 4b str. CLIP 80459 7703515 YP_002759434.1 CDS Lm4b_02750 NC_012488.1 2830727 2832895 R Hypothetical membrane protein complement(2830727..2832895) Listeria monocytogenes serotype 4b str. CLIP 80459 7703516 YP_002759435.1 CDS Lm4b_02751 NC_012488.1 2832958 2833353 R hypothetical protein complement(2832958..2833353) Listeria monocytogenes serotype 4b str. CLIP 80459 7703517 YP_002759436.1 CDS Lm4b_02752 NC_012488.1 2833954 2835144 D efflux protein 2833954..2835144 Listeria monocytogenes serotype 4b str. CLIP 80459 7703518 YP_002759437.1 CDS Lm4b_02753 NC_012488.1 2835277 2835786 R hypothetical protein complement(2835277..2835786) Listeria monocytogenes serotype 4b str. CLIP 80459 7703519 YP_002759438.1 CDS Lm4b_02754 NC_012488.1 2835820 2836083 R hypothetical protein complement(2835820..2836083) Listeria monocytogenes serotype 4b str. CLIP 80459 7703520 YP_002759439.1 CDS Lm4b_02755 NC_012488.1 2836107 2837207 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(2836107..2837207) Listeria monocytogenes serotype 4b str. CLIP 80459 7703521 YP_002759440.1 CDS Lm4b_02756 NC_012488.1 2837358 2837666 R cellobiose PTS enzyme IIA complement(2837358..2837666) Listeria monocytogenes serotype 4b str. CLIP 80459 7703522 YP_002759441.1 CDS Lm4b_02757 NC_012488.1 2837672 2839942 R beta-glucosidase complement(2837672..2839942) Listeria monocytogenes serotype 4b str. CLIP 80459 7703523 YP_002759442.1 CDS Lm4b_02758 NC_012488.1 2839977 2840276 R PTS, cellobiose-specific IIB component complement(2839977..2840276) Listeria monocytogenes serotype 4b str. CLIP 80459 7703524 YP_002759443.1 CDS Lm4b_02759 NC_012488.1 2840291 2841586 R cellobiose phosphotransferase system enzyme IIC complement(2840291..2841586) Listeria monocytogenes serotype 4b str. CLIP 80459 7703525 YP_002759444.1 CDS Lm4b_02760 NC_012488.1 2841736 2843652 R licABCH operon regulator complement(2841736..2843652) Listeria monocytogenes serotype 4b str. CLIP 80459 7703526 YP_002759445.1 CDS kat NC_012488.1 2843863 2845329 R catalase complement(2843863..2845329) Listeria monocytogenes serotype 4b str. CLIP 80459 7703366 YP_002759446.1 CDS Lm4b_02762 NC_012488.1 2845478 2845681 R hypothetical protein complement(2845478..2845681) Listeria monocytogenes serotype 4b str. CLIP 80459 7702519 YP_002759447.1 CDS parB NC_012488.1 2845688 2846539 R Partition protein ParB homolg complement(2845688..2846539) Listeria monocytogenes serotype 4b str. CLIP 80459 7703367 YP_002759448.1 CDS parA NC_012488.1 2846532 2847293 R Partition protein, ParA homolog complement(2846532..2847293) Listeria monocytogenes serotype 4b str. CLIP 80459 7704034 YP_002759449.1 CDS Lm4b_02765 NC_012488.1 2847517 2848275 R hypothetical protein complement(2847517..2848275) Listeria monocytogenes serotype 4b str. CLIP 80459 7704033 YP_002759450.1 CDS Lm4b_02766 NC_012488.1 2848434 2848733 R hypothetical protein complement(2848434..2848733) Listeria monocytogenes serotype 4b str. CLIP 80459 7703368 YP_002759451.1 CDS Lm4b_02767 NC_012488.1 2848745 2849599 R DNA-binding protein Spo0J-like complement(2848745..2849599) Listeria monocytogenes serotype 4b str. CLIP 80459 7703369 YP_002759452.1 CDS Lm4b_02768 NC_012488.1 2849771 2850577 R RpiR transcription regulator complement(2849771..2850577) Listeria monocytogenes serotype 4b str. CLIP 80459 7703370 YP_002759453.1 CDS Lm4b_02769 NC_012488.1 2850561 2851466 R transcription regulator complement(2850561..2851466) Listeria monocytogenes serotype 4b str. CLIP 80459 7703371 YP_002759454.1 CDS Lm4b_02770 NC_012488.1 2851491 2851937 R phosphotransferase system mannitol-specific enzyme IIA complement(2851491..2851937) Listeria monocytogenes serotype 4b str. CLIP 80459 7703372 YP_002759455.1 CDS Lm4b_02771 NC_012488.1 2851950 2852606 R phosphatase complement(2851950..2852606) Listeria monocytogenes serotype 4b str. CLIP 80459 7703373 YP_002759456.1 CDS Lm4b_02772 NC_012488.1 2852669 2854075 R phosphotransferase system mannitol-specific enzyme IIBC complement(2852669..2854075) Listeria monocytogenes serotype 4b str. CLIP 80459 7703374 YP_002759457.1 CDS Lm4b_02773 NC_012488.1 2854109 2855110 R dehydrogenase complement(2854109..2855110) Listeria monocytogenes serotype 4b str. CLIP 80459 7703375 YP_002759458.1 CDS Lm4b_02774 NC_012488.1 2855130 2855825 R Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; N-acetylmannosamine-6-phosphate 2-epimerase complement(2855130..2855825) Listeria monocytogenes serotype 4b str. CLIP 80459 7703376 YP_002759459.1 CDS gidB NC_012488.1 2856027 2856743 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(2856027..2856743) Listeria monocytogenes serotype 4b str. CLIP 80459 7703377 YP_002759460.1 CDS Lm4b_02776b NC_012488.1 2856896 2857162 R hypothetical protein complement(2856896..2857162) Listeria monocytogenes serotype 4b str. CLIP 80459 7702935 YP_002759461.1 CDS Lm4b_02777 NC_012488.1 2857164 2857529 R hypothetical protein complement(2857164..2857529) Listeria monocytogenes serotype 4b str. CLIP 80459 7703378 YP_002759462.1 CDS Lm4b_02778 NC_012488.1 2857522 2858805 R hypothetical protein complement(2857522..2858805) Listeria monocytogenes serotype 4b str. CLIP 80459 7703379 YP_002759463.1 CDS Lm4b_02779 NC_012488.1 2858808 2859194 R hypothetical protein complement(2858808..2859194) Listeria monocytogenes serotype 4b str. CLIP 80459 7703381 YP_002759464.1 CDS Lm4b_02780 NC_012488.1 2859322 2859708 R hypothetical protein complement(2859322..2859708) Listeria monocytogenes serotype 4b str. CLIP 80459 7703382 YP_002759465.1 CDS Lm4b_02781 NC_012488.1 2859821 2860213 R hypothetical protein complement(2859821..2860213) Listeria monocytogenes serotype 4b str. CLIP 80459 7703384 YP_002759466.1 CDS Lm4b_02782 NC_012488.1 2860238 2860618 R hypothetical protein complement(2860238..2860618) Listeria monocytogenes serotype 4b str. CLIP 80459 7703385 YP_002759467.1 CDS gidA NC_012488.1 2860777 2862666 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA complement(2860777..2862666) Listeria monocytogenes serotype 4b str. CLIP 80459 7703386 YP_002759468.1 CDS trmE NC_012488.1 2862691 2864064 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(2862691..2864064) Listeria monocytogenes serotype 4b str. CLIP 80459 7702934 YP_002759469.1 CDS Lm4b_02785 NC_012488.1 2864422 2865240 D D-alanyl-D-alanine carboxypeptidase 2864422..2865240 Listeria monocytogenes serotype 4b str. CLIP 80459 7703387 YP_002759470.1 CDS Lm4b_02786 NC_012488.1 2865295 2866002 R hypothetical protein complement(2865295..2866002) Listeria monocytogenes serotype 4b str. CLIP 80459 7703388 YP_002759471.1 CDS Lm4b_02787 NC_012488.1 2866026 2866553 R transcriptional regulator complement(2866026..2866553) Listeria monocytogenes serotype 4b str. CLIP 80459 7703389 YP_002759472.1 CDS fabG NC_012488.1 2866714 2867445 D catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 2866714..2867445 Listeria monocytogenes serotype 4b str. CLIP 80459 7703390 YP_002759473.1 CDS Lm4b_02789 NC_012488.1 2867492 2868685 R transport protein complement(2867492..2868685) Listeria monocytogenes serotype 4b str. CLIP 80459 7703391 YP_002759474.1 CDS Lm4b_02790 NC_012488.1 2868773 2869963 R peptidase complement(2868773..2869963) Listeria monocytogenes serotype 4b str. CLIP 80459 7703392 YP_002759475.1 CDS Lm4b_02791 NC_012488.1 2869979 2871379 R transmembrane efflux protein complement(2869979..2871379) Listeria monocytogenes serotype 4b str. CLIP 80459 7703393 YP_002759476.1 CDS Lm4b_02792 NC_012488.1 2871379 2872581 R carboxypeptidase complement(2871379..2872581) Listeria monocytogenes serotype 4b str. CLIP 80459 7703394 YP_002759477.1 CDS Lm4b_02793 NC_012488.1 2872775 2875117 R AraC family transcriptional regulator complement(2872775..2875117) Listeria monocytogenes serotype 4b str. CLIP 80459 7703395 YP_002759478.1 CDS Lm4b_02794 NC_012488.1 2875330 2877870 D peptidoglycan bound protein (LPXTG motif) 2875330..2877870 Listeria monocytogenes serotype 4b str. CLIP 80459 7703396 YP_002759479.1 CDS Lm4b_02795 NC_012488.1 2877915 2878238 R hypothetical protein complement(2877915..2878238) Listeria monocytogenes serotype 4b str. CLIP 80459 7703397 YP_002759480.1 CDS Lm4b_02796 NC_012488.1 2878246 2879487 R hypothetical protein complement(2878246..2879487) Listeria monocytogenes serotype 4b str. CLIP 80459 7703398 YP_002759481.1 CDS Lm4b_02797 NC_012488.1 2879576 2880763 R D-3-phosphoglycerate dehydrogenase complement(2879576..2880763) Listeria monocytogenes serotype 4b str. CLIP 80459 7703399 YP_002759482.1 CDS serC NC_012488.1 2880756 2881847 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(2880756..2881847) Listeria monocytogenes serotype 4b str. CLIP 80459 7703400 YP_002759483.1 CDS Lm4b_02799 NC_012488.1 2882218 2883366 R efflux protein complement(2882218..2883366) Listeria monocytogenes serotype 4b str. CLIP 80459 7701583 YP_002759484.1 CDS Lm4b_02800 NC_012488.1 2883380 2883802 R transcriptional regulator (MarR family) complement(2883380..2883802) Listeria monocytogenes serotype 4b str. CLIP 80459 7703401 YP_002759485.1 CDS Lm4b_02801 NC_012488.1 2883905 2884258 R hypothetical protein complement(2883905..2884258) Listeria monocytogenes serotype 4b str. CLIP 80459 7703402 YP_002759486.1 CDS Lm4b_02802 NC_012488.1 2884452 2885051 D nitroreductase family protein 2884452..2885051 Listeria monocytogenes serotype 4b str. CLIP 80459 7703403 YP_002759487.1 CDS Lm4b_02803 NC_012488.1 2885109 2885429 R thioredoxin complement(2885109..2885429) Listeria monocytogenes serotype 4b str. CLIP 80459 7703404 YP_002759488.1 CDS Lm4b_02804 NC_012488.1 2885552 2886214 R phosphoglucomutase complement(2885552..2886214) Listeria monocytogenes serotype 4b str. CLIP 80459 7703405 YP_002759489.1 CDS Lm4b_02805 NC_012488.1 2886211 2887332 R hypothetical protein complement(2886211..2887332) Listeria monocytogenes serotype 4b str. CLIP 80459 7703406 YP_002759490.1 CDS Lm4b_02806 NC_012488.1 2887329 2889506 R maltose phosphorylase complement(2887329..2889506) Listeria monocytogenes serotype 4b str. CLIP 80459 7703407 YP_002759491.1 CDS Lm4b_02807 NC_012488.1 2889503 2890534 R oxidoreductase complement(2889503..2890534) Listeria monocytogenes serotype 4b str. CLIP 80459 7703408 YP_002759492.1 CDS Lm4b_02808 NC_012488.1 2890591 2891385 R hypothetical protein complement(2890591..2891385) Listeria monocytogenes serotype 4b str. CLIP 80459 7703409 YP_002759493.1 CDS Lm4b_02809 NC_012488.1 2891398 2892450 R alcohol dehydrogenase complement(2891398..2892450) Listeria monocytogenes serotype 4b str. CLIP 80459 7703410 YP_002759494.1 CDS Lm4b_02810 NC_012488.1 2892469 2893320 R sugar ABC transporter permease complement(2892469..2893320) Listeria monocytogenes serotype 4b str. CLIP 80459 7703411 YP_002759495.1 CDS Lm4b_02811 NC_012488.1 2893307 2894188 R sugar ABC transporter permease complement(2893307..2894188) Listeria monocytogenes serotype 4b str. CLIP 80459 7703412 YP_002759496.1 CDS Lm4b_02812 NC_012488.1 2894264 2895556 R sugar binding protein (ABC transporter) complement(2894264..2895556) Listeria monocytogenes serotype 4b str. CLIP 80459 7703413 YP_002759497.1 CDS Lm4b_02813 NC_012488.1 2895553 2897253 R Sucrose phosphorylase complement(2895553..2897253) Listeria monocytogenes serotype 4b str. CLIP 80459 7703414 YP_002759498.1 CDS Lm4b_02814 NC_012488.1 2897478 2898503 D transcriptional regulator 2897478..2898503 Listeria monocytogenes serotype 4b str. CLIP 80459 7703415 YP_002759499.1 CDS Lm4b_02815 NC_012488.1 2898640 2900634 R hypothetical protein complement(2898640..2900634) Listeria monocytogenes serotype 4b str. CLIP 80459 7704353 YP_002759500.1 CDS Lm4b_02816 NC_012488.1 2900767 2901309 R hypothetical protein complement(2900767..2901309) Listeria monocytogenes serotype 4b str. CLIP 80459 7703417 YP_002759501.1 CDS Lm4b_02817 NC_012488.1 2901465 2902877 D transmembrane efflux protein 2901465..2902877 Listeria monocytogenes serotype 4b str. CLIP 80459 7703418 YP_002759502.1 CDS Lm4b_02818 NC_012488.1 2902918 2903232 R L-rhamnose mutarotase complement(2902918..2903232) Listeria monocytogenes serotype 4b str. CLIP 80459 7703419 YP_002759503.1 CDS Lm4b_02819 NC_012488.1 2903245 2904066 R rhamnulose-1-phosphate aldolase complement(2903245..2904066) Listeria monocytogenes serotype 4b str. CLIP 80459 7703420 YP_002759504.1 CDS Lm4b_02820 NC_012488.1 2904079 2905341 R catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase complement(2904079..2905341) Listeria monocytogenes serotype 4b str. CLIP 80459 7703421 YP_002759505.1 CDS Lm4b_02821 NC_012488.1 2905354 2906805 R rhamnulokinase complement(2905354..2906805) Listeria monocytogenes serotype 4b str. CLIP 80459 7703422 YP_002759506.1 CDS Lm4b_02822 NC_012488.1 2906824 2908092 R sugar transport protein complement(2906824..2908092) Listeria monocytogenes serotype 4b str. CLIP 80459 7703423 YP_002759507.1 CDS Lm4b_02823 NC_012488.1 2908215 2909195 D AraC family transcriptional regulator 2908215..2909195 Listeria monocytogenes serotype 4b str. CLIP 80459 7703424 YP_002759508.1 CDS Lm4b_02824 NC_012488.1 2909245 2909706 R hypothetical protein complement(2909245..2909706) Listeria monocytogenes serotype 4b str. CLIP 80459 7703425 YP_002759509.1 CDS Lm4b_02825 NC_012488.1 2909761 2910381 R Jag protein complement(2909761..2910381) Listeria monocytogenes serotype 4b str. CLIP 80459 7703426 YP_002759510.1 CDS Lm4b_02826 NC_012488.1 2910378 2911241 R SpoIIIJ protein complement(2910378..2911241) Listeria monocytogenes serotype 4b str. CLIP 80459 7703427 YP_002759511.1 CDS rnpA NC_012488.1 2911282 2911641 R protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P complement(2911282..2911641) Listeria monocytogenes serotype 4b str. CLIP 80459 7703428 YP_002759512.1 CDS Lm4b_02829 NC_012488.1 2912033 2912503 R hypothetical protein complement(2912033..2912503) Listeria monocytogenes serotype 4b str. CLIP 80459 7702599 Lm4b_t00001 tRNA Lm4b_t00001 NC_012488.1 86582 86654 D tRNA-Lys 86582..86654 Listeria monocytogenes serotype 4b str. CLIP 80459 7701723 Lm4b_t00002 tRNA Lm4b_t00002 NC_012488.1 239006 239078 D tRNA-Val 239006..239078 Listeria monocytogenes serotype 4b str. CLIP 80459 7702467 Lm4b_t00003 tRNA Lm4b_t00003 NC_012488.1 239087 239162 D tRNA-Thr 239087..239162 Listeria monocytogenes serotype 4b str. CLIP 80459 7703431 Lm4b_t00004 tRNA Lm4b_t00004 NC_012488.1 239203 239275 D tRNA-Lys 239203..239275 Listeria monocytogenes serotype 4b str. CLIP 80459 7703432 Lm4b_t00005 tRNA Lm4b_t00005 NC_012488.1 239281 239362 D tRNA-Leu 239281..239362 Listeria monocytogenes serotype 4b str. CLIP 80459 7703433 Lm4b_t00006 tRNA Lm4b_t00006 NC_012488.1 239377 239448 D tRNA-Gly 239377..239448 Listeria monocytogenes serotype 4b str. CLIP 80459 7703434 Lm4b_t00007 tRNA Lm4b_t00007 NC_012488.1 239470 239555 D tRNA-Leu 239470..239555 Listeria monocytogenes serotype 4b str. CLIP 80459 7703435 Lm4b_t00008 tRNA Lm4b_t00008 NC_012488.1 239568 239641 D tRNA-Arg 239568..239641 Listeria monocytogenes serotype 4b str. CLIP 80459 7703436 Lm4b_t00009 tRNA Lm4b_t00009 NC_012488.1 239652 239725 D tRNA-Pro 239652..239725 Listeria monocytogenes serotype 4b str. CLIP 80459 7703437 Lm4b_t00010 tRNA Lm4b_t00010 NC_012488.1 239744 239819 D tRNA-Ala 239744..239819 Listeria monocytogenes serotype 4b str. CLIP 80459 7703438 Lm4b_t00011 tRNA Lm4b_t00011 NC_012488.1 675591 675680 R tRNA-Ser complement(675591..675680) Listeria monocytogenes serotype 4b str. CLIP 80459 7701955 Lm4b_t00012 tRNA Lm4b_t00012 NC_012488.1 937009 937081 D tRNA-Asn 937009..937081 Listeria monocytogenes serotype 4b str. CLIP 80459 7704495 Lm4b_t00013 tRNA Lm4b_t00013 NC_012488.1 937085 937172 D tRNA-Ser 937085..937172 Listeria monocytogenes serotype 4b str. CLIP 80459 7703441 Lm4b_t00014 tRNA Lm4b_t00014 NC_012488.1 941136 941207 D tRNA-Glu 941136..941207 Listeria monocytogenes serotype 4b str. CLIP 80459 7704501 Lm4b_t00015 tRNA Lm4b_t00015 NC_012488.1 941234 941306 D tRNA-Asp 941234..941306 Listeria monocytogenes serotype 4b str. CLIP 80459 7703443 Lm4b_t00016 tRNA Lm4b_t00016 NC_012488.1 972917 972987 D tRNA-Gly 972917..972987 Listeria monocytogenes serotype 4b str. CLIP 80459 7704531 Lm4b_t00017 tRNA Lm4b_t00017 NC_012488.1 1247345 1247418 D tRNA-Arg 1247345..1247418 Listeria monocytogenes serotype 4b str. CLIP 80459 7703363 Lm4b_t00018 tRNA Lm4b_t00018 NC_012488.1 1727316 1727387 R tRNA-Glu complement(1727316..1727387) Listeria monocytogenes serotype 4b str. CLIP 80459 7702715 Lm4b_t00019 tRNA Lm4b_t00019 NC_012488.1 1727393 1727483 R tRNA-Ser complement(1727393..1727483) Listeria monocytogenes serotype 4b str. CLIP 80459 7704304 Lm4b_t00020 tRNA Lm4b_t00020 NC_012488.1 1727518 1727590 R tRNA-Asn complement(1727518..1727590) Listeria monocytogenes serotype 4b str. CLIP 80459 7704305 Lm4b_t00021 tRNA Lm4b_t00021 NC_012488.1 1727597 1727670 R tRNA-Ile complement(1727597..1727670) Listeria monocytogenes serotype 4b str. CLIP 80459 7704306 Lm4b_t00022 tRNA Lm4b_t00022 NC_012488.1 1727696 1727766 R tRNA-Gly complement(1727696..1727766) Listeria monocytogenes serotype 4b str. CLIP 80459 7704307 Lm4b_t00023 tRNA Lm4b_t00023 NC_012488.1 1727791 1727863 R tRNA-His complement(1727791..1727863) Listeria monocytogenes serotype 4b str. CLIP 80459 7704308 Lm4b_t00024 tRNA Lm4b_t00024 NC_012488.1 1727892 1727964 R tRNA-Phe complement(1727892..1727964) Listeria monocytogenes serotype 4b str. CLIP 80459 7704309 Lm4b_t00025 tRNA Lm4b_t00025 NC_012488.1 1727969 1728044 R tRNA-Asp complement(1727969..1728044) Listeria monocytogenes serotype 4b str. CLIP 80459 7704310 Lm4b_t00026 tRNA Lm4b_t00026 NC_012488.1 1728049 1728122 R tRNA-Met complement(1728049..1728122) Listeria monocytogenes serotype 4b str. CLIP 80459 7704311 Lm4b_t00027 tRNA Lm4b_t00027 NC_012488.1 1728165 1728254 R tRNA-Ser complement(1728165..1728254) Listeria monocytogenes serotype 4b str. CLIP 80459 7704312 Lm4b_t00028 tRNA Lm4b_t00028 NC_012488.1 1728277 1728350 R tRNA-Met complement(1728277..1728350) Listeria monocytogenes serotype 4b str. CLIP 80459 7704313 Lm4b_t00029 tRNA Lm4b_t00029 NC_012488.1 1728362 1728435 R tRNA-Met complement(1728362..1728435) Listeria monocytogenes serotype 4b str. CLIP 80459 7704314 Lm4b_t00030 tRNA Lm4b_t00030 NC_012488.1 1728478 1728550 R tRNA-Ala complement(1728478..1728550) Listeria monocytogenes serotype 4b str. CLIP 80459 7704315 Lm4b_t00031 tRNA Lm4b_t00031 NC_012488.1 1728573 1728646 R tRNA-Pro complement(1728573..1728646) Listeria monocytogenes serotype 4b str. CLIP 80459 7704316 Lm4b_t00032 tRNA Lm4b_t00032 NC_012488.1 1728657 1728730 R tRNA-Arg complement(1728657..1728730) Listeria monocytogenes serotype 4b str. CLIP 80459 7704317 Lm4b_t00033 tRNA Lm4b_t00033 NC_012488.1 1728740 1728825 R tRNA-Leu complement(1728740..1728825) Listeria monocytogenes serotype 4b str. CLIP 80459 7704318 Lm4b_t00034 tRNA Lm4b_t00034 NC_012488.1 1728840 1728914 R tRNA-Gly complement(1728840..1728914) Listeria monocytogenes serotype 4b str. CLIP 80459 7704319 Lm4b_t00035 tRNA Lm4b_t00035 NC_012488.1 1728930 1729011 R tRNA-Leu complement(1728930..1729011) Listeria monocytogenes serotype 4b str. CLIP 80459 7704320 Lm4b_t00036 tRNA Lm4b_t00036 NC_012488.1 1729017 1729089 R tRNA-Lys complement(1729017..1729089) Listeria monocytogenes serotype 4b str. CLIP 80459 7704321 Lm4b_t00037 tRNA Lm4b_t00037 NC_012488.1 1729130 1729205 R tRNA-Thr complement(1729130..1729205) Listeria monocytogenes serotype 4b str. CLIP 80459 7704322 Lm4b_t00038 tRNA Lm4b_t00038 NC_012488.1 1729214 1729286 R tRNA-Val complement(1729214..1729286) Listeria monocytogenes serotype 4b str. CLIP 80459 7704323 Lm4b_t00039 tRNA Lm4b_t00039 NC_012488.1 1762520 1762591 D tRNA-Arg 1762520..1762591 Listeria monocytogenes serotype 4b str. CLIP 80459 7701664 Lm4b_t00040 tRNA Lm4b_t00040 NC_012488.1 2161820 2161906 D tRNA-Leu 2161820..2161906 Listeria monocytogenes serotype 4b str. CLIP 80459 7703145 Lm4b_t00041 tRNA Lm4b_t00041 NC_012488.1 2216437 2216508 D tRNA-Glu 2216437..2216508 Listeria monocytogenes serotype 4b str. CLIP 80459 7703191 Lm4b_t00042 tRNA Lm4b_t00042 NC_012488.1 2216666 2216739 D tRNA-Thr 2216666..2216739 Listeria monocytogenes serotype 4b str. CLIP 80459 7704327 Lm4b_t00043 tRNA Lm4b_t00043 NC_012488.1 2216749 2216832 D tRNA-Tyr 2216749..2216832 Listeria monocytogenes serotype 4b str. CLIP 80459 7704328 Lm4b_t00044 tRNA Lm4b_t00044 NC_012488.1 2216844 2216918 D tRNA-Gln 2216844..2216918 Listeria monocytogenes serotype 4b str. CLIP 80459 7704329 Lm4b_t00045 tRNA Lm4b_t00045 NC_012488.1 2216925 2217000 D tRNA-Lys 2216925..2217000 Listeria monocytogenes serotype 4b str. CLIP 80459 7704330 Lm4b_t00046 tRNA Lm4b_t00046 NC_012488.1 2406829 2406912 R tRNA-Leu complement(2406829..2406912) Listeria monocytogenes serotype 4b str. CLIP 80459 7703601 Lm4b_t00047 tRNA Lm4b_t00047 NC_012488.1 2406958 2407031 R tRNA-Cys complement(2406958..2407031) Listeria monocytogenes serotype 4b str. CLIP 80459 7704332 Lm4b_t00048 tRNA Lm4b_t00048 NC_012488.1 2407051 2407122 R tRNA-Gly complement(2407051..2407122) Listeria monocytogenes serotype 4b str. CLIP 80459 7704333 Lm4b_t00049 tRNA Lm4b_t00049 NC_012488.1 2407128 2407199 R tRNA-Gln complement(2407128..2407199) Listeria monocytogenes serotype 4b str. CLIP 80459 7704334 Lm4b_t00050 tRNA Lm4b_t00050 NC_012488.1 2407229 2407301 R tRNA-His complement(2407229..2407301) Listeria monocytogenes serotype 4b str. CLIP 80459 7704335 Lm4b_t00051 tRNA Lm4b_t00051 NC_012488.1 2407317 2407390 R tRNA-Trp complement(2407317..2407390) Listeria monocytogenes serotype 4b str. CLIP 80459 7704336 Lm4b_t00052 tRNA Lm4b_t00052 NC_012488.1 2407398 2407481 R tRNA-Tyr complement(2407398..2407481) Listeria monocytogenes serotype 4b str. CLIP 80459 7704337 Lm4b_t00053 tRNA Lm4b_t00053 NC_012488.1 2407502 2407574 R tRNA-Phe complement(2407502..2407574) Listeria monocytogenes serotype 4b str. CLIP 80459 7704338 Lm4b_t00054 tRNA Lm4b_t00054 NC_012488.1 2407579 2407654 R tRNA-Asp complement(2407579..2407654) Listeria monocytogenes serotype 4b str. CLIP 80459 7704339 Lm4b_t00055 tRNA Lm4b_t00055 NC_012488.1 2407661 2407734 R tRNA-Met complement(2407661..2407734) Listeria monocytogenes serotype 4b str. CLIP 80459 7704340 Lm4b_t00056 tRNA Lm4b_t00056 NC_012488.1 2407756 2407831 R tRNA-Val complement(2407756..2407831) Listeria monocytogenes serotype 4b str. CLIP 80459 7704341 Lm4b_t00057 tRNA Lm4b_t00057 NC_012488.1 2407889 2407960 R tRNA-Glu complement(2407889..2407960) Listeria monocytogenes serotype 4b str. CLIP 80459 7704342 Lm4b_t00058 tRNA Lm4b_t00058 NC_012488.1 2407994 2408082 R tRNA-Ser complement(2407994..2408082) Listeria monocytogenes serotype 4b str. CLIP 80459 7704343 Lm4b_t00059 tRNA Lm4b_t00059 NC_012488.1 2408089 2408164 R tRNA-Asn complement(2408089..2408164) Listeria monocytogenes serotype 4b str. CLIP 80459 7704344 Lm4b_t00060 tRNA Lm4b_t00060 NC_012488.1 2411473 2411548 R tRNA-Ala complement(2411473..2411548) Listeria monocytogenes serotype 4b str. CLIP 80459 7702465 Lm4b_t00061 tRNA Lm4b_t00061 NC_012488.1 2411595 2411668 R tRNA-Ile complement(2411595..2411668) Listeria monocytogenes serotype 4b str. CLIP 80459 7704346 Lm4b_t00062 tRNA Lm4b_t00062 NC_012488.1 2512969 2513040 R tRNA-Arg complement(2512969..2513040) Listeria monocytogenes serotype 4b str. CLIP 80459 7704097 Lm4b_t00063 tRNA Lm4b_t00063 NC_012488.1 2639379 2639451 R tRNA-Thr complement(2639379..2639451) Listeria monocytogenes serotype 4b str. CLIP 80459 7702724 Lm4b_t00064 tRNA Lm4b_t00064 NC_012488.1 2639476 2639551 R tRNA-Asn complement(2639476..2639551) Listeria monocytogenes serotype 4b str. CLIP 80459 7704349 Lm4b_t00065 tRNA Lm4b_t00065 NC_012488.1 2642859 2642934 R tRNA-Ala complement(2642859..2642934) Listeria monocytogenes serotype 4b str. CLIP 80459 7702466 Lm4b_t00066 tRNA Lm4b_t00066 NC_012488.1 2642981 2643054 R tRNA-Ile complement(2642981..2643054) Listeria monocytogenes serotype 4b str. CLIP 80459 7704351 Lm4b_t00067 tRNA Lm4b_t00067 NC_012488.1 2898524 2898596 D tRNA-Val 2898524..2898596 Listeria monocytogenes serotype 4b str. CLIP 80459 7703416 Lm4b_r00001 rRNA rRNA-16s NC_012488.1 234080 235590 D 16S ribosomal RNA 234080..235590 Listeria monocytogenes serotype 4b str. CLIP 80459 7702544 Lm4b_r00002 rRNA rRNA-23s NC_012488.1 235872 238803 D 23S ribosomal RNA 235872..238803 Listeria monocytogenes serotype 4b str. CLIP 80459 7702455 Lm4b_r00003 rRNA rRNA-5s NC_012488.1 238881 238996 D 5S ribosomal RNA 238881..238996 Listeria monocytogenes serotype 4b str. CLIP 80459 7702461 Lm4b_r00004 rRNA rRNA-16s NC_012488.1 240099 241609 D 16S ribosomal RNA 240099..241609 Listeria monocytogenes serotype 4b str. CLIP 80459 7703439 Lm4b_r00005 rRNA rRNA-23s NC_012488.1 241891 244822 D 23S ribosomal RNA 241891..244822 Listeria monocytogenes serotype 4b str. CLIP 80459 7702456 Lm4b_r00006 rRNA rRNA-5s NC_012488.1 244900 245015 D 5S ribosomal RNA 244900..245015 Listeria monocytogenes serotype 4b str. CLIP 80459 7702462 Lm4b_r00007 rRNA rRNA-5s NC_012488.1 1729296 1729411 R 5S ribosomal RNA complement(1729296..1729411) Listeria monocytogenes serotype 4b str. CLIP 80459 7704324 Lm4b_r00008 rRNA rRNA-23s NC_012488.1 1729490 1732421 R 23S ribosomal RNA complement(1729490..1732421) Listeria monocytogenes serotype 4b str. CLIP 80459 7702469 Lm4b_r00009 rRNA rRNA-16s NC_012488.1 1732703 1734213 R 16S ribosomal RNA complement(1732703..1734213) Listeria monocytogenes serotype 4b str. CLIP 80459 7702463 Lm4b_r00010 rRNA rRNA-5s NC_012488.1 1835254 1835369 R 5S ribosomal RNA complement(1835254..1835369) Listeria monocytogenes serotype 4b str. CLIP 80459 7701712 Lm4b_r00011 rRNA rRNA-23s NC_012488.1 1835447 1838378 R 23S ribosomal RNA complement(1835447..1838378) Listeria monocytogenes serotype 4b str. CLIP 80459 7702470 Lm4b_r00012 rRNA rRNA-16s NC_012488.1 1838660 1840170 R 16S ribosomal RNA complement(1838660..1840170) Listeria monocytogenes serotype 4b str. CLIP 80459 7702464 Lm4b_r00013 rRNA rRNA-5s NC_012488.1 2408175 2408290 R 5S ribosomal RNA complement(2408175..2408290) Listeria monocytogenes serotype 4b str. CLIP 80459 7704345 Lm4b_r00014 rRNA rRNA-23s NC_012488.1 2408369 2411300 R 23S ribosomal RNA complement(2408369..2411300) Listeria monocytogenes serotype 4b str. CLIP 80459 7702471 Lm4b_r00015 rRNA rRNA-16s NC_012488.1 2411833 2413343 R 16S ribosomal RNA complement(2411833..2413343) Listeria monocytogenes serotype 4b str. CLIP 80459 7704347 Lm4b_r00016 rRNA rRNA-5s NC_012488.1 2639562 2639677 R 5S ribosomal RNA complement(2639562..2639677) Listeria monocytogenes serotype 4b str. CLIP 80459 7704350 Lm4b_r00017 rRNA rRNA-23s NC_012488.1 2639755 2642686 R 23S ribosomal RNA complement(2639755..2642686) Listeria monocytogenes serotype 4b str. CLIP 80459 7702472 Lm4b_r00018 rRNA rRNA-16s NC_012488.1 2643219 2644729 R 16S ribosomal RNA complement(2643219..2644729) Listeria monocytogenes serotype 4b str. CLIP 80459 7704352