-- dump date 20140619_133926 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_012614.1 46906225 2797802 319..1674 1 NC_002973.6 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1674 dnaA 2797802 dnaA Listeria monocytogenes serotype 4b str. F2365 chromosomal replication initiation protein YP_012614.1 319 D 265669 CDS YP_012615.1 46906226 2797438 1868..3013 1 NC_002973.6 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 3013 dnaN 2797438 dnaN Listeria monocytogenes serotype 4b str. F2365 DNA polymerase III subunit beta YP_012615.1 1868 D 265669 CDS YP_012616.1 46906227 2798218 3121..4464 1 NC_002973.6 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 4464 2798218 LMOf2365_0003 Listeria monocytogenes serotype 4b str. F2365 MATE efflux family protein YP_012616.1 3121 D 265669 CDS YP_012617.1 46906228 2798867 4644..4865 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0004; hypothetical protein 4865 2798867 LMOf2365_0004 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012617.1 4644 D 265669 CDS YP_012618.1 46906229 2798160 4869..5981 1 NC_002973.6 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 5981 recF 2798160 recF Listeria monocytogenes serotype 4b str. F2365 recombination protein F YP_012618.1 4869 D 265669 CDS YP_012619.1 46906230 2799363 6030..7970 1 NC_002973.6 identified by similarity to SP:P05652; match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF01751; match to protein family HMM PF02518; match to protein family HMM TIGR01059; DNA gyrase subunit B 7970 gyrB 2799363 gyrB Listeria monocytogenes serotype 4b str. F2365 DNA gyrase subunit B YP_012619.1 6030 D 265669 CDS YP_012620.1 46906231 2798865 8065..10593 1 NC_002973.6 identified by similarity to SP:P05653; match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01063; match to protein family HMM TIGR01967; DNA gyrase subunit A 10593 gyrA 2798865 gyrA Listeria monocytogenes serotype 4b str. F2365 DNA gyrase subunit A YP_012620.1 8065 D 265669 CDS YP_012621.1 46906232 2799364 10727..12241 1 NC_002973.6 identified by similarity to SP:O66043; match to protein family HMM PF00614; cardiolipin synthetase 12241 cls-1 2799364 cls-1 Listeria monocytogenes serotype 4b str. F2365 cardiolipin synthetase YP_012621.1 10727 D 265669 CDS YP_012622.1 46906233 2797002 12257..12775 1 NC_002973.6 identified by similarity to SP:P37354; match to protein family HMM PF00583; spermidine N1-acetyltransferase 12775 speG 2797002 speG Listeria monocytogenes serotype 4b str. F2365 spermidine N1-acetyltransferase YP_012622.1 12257 D 265669 CDS YP_012623.1 46906234 2798845 12779..12895 1 NC_002973.6 hypothetical protein 12895 2798845 LMOf2365_0010 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012623.1 12779 D 265669 CDS YP_012624.1 46906235 2798266 12917..13885 1 NC_002973.6 identified by similarity to GP:9937379; match to protein family HMM PF00288; match to protein family HMM TIGR00549; mevalonate kinase 13885 2798266 LMOf2365_0011 Listeria monocytogenes serotype 4b str. F2365 mevalonate kinase YP_012624.1 12917 D 265669 CDS YP_012625.1 46906236 2799372 13842..14813 1 NC_002973.6 identified by match to protein family HMM PF00288; match to protein family HMM TIGR01240; diphosphomevalonate decarboxylase 14813 mvaD 2799372 mvaD Listeria monocytogenes serotype 4b str. F2365 diphosphomevalonate decarboxylase YP_012625.1 13842 D 265669 CDS YP_012626.1 46906237 2799374 14803..15873 1 NC_002973.6 identified by match to protein family HMM PF00288; match to protein family HMM TIGR01220; phosphomevalonate kinase 15873 2799374 LMOf2365_0013 Listeria monocytogenes serotype 4b str. F2365 phosphomevalonate kinase YP_012626.1 14803 D 265669 CDS YP_012627.1 46906238 2797976 complement(15966..16160) 1 NC_002973.6 hypothetical protein 16160 2797976 LMOf2365_0014 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012627.1 15966 R 265669 CDS YP_012628.1 46906239 2798376 18301..19407 1 NC_002973.6 identified by similarity to SP:P34957; match to protein family HMM PF02790; match to protein family HMM TIGR01432; quinol oxidase AA3, subunit II 19407 qoxA 2798376 qoxA Listeria monocytogenes serotype 4b str. F2365 quinol oxidase AA3, subunit II YP_012628.1 18301 D 265669 CDS YP_012629.1 46906240 2797953 19426..21405 1 NC_002973.6 identified by similarity to SP:P34956; match to protein family HMM PF00115; quinol oxidase AA3 subunit I 21405 qoxB 2797953 qoxB Listeria monocytogenes serotype 4b str. F2365 quinol oxidase AA3 subunit I YP_012629.1 19426 D 265669 CDS YP_012630.1 46906241 2798842 21393..22004 1 NC_002973.6 identified by similarity to SP:P34958; match to protein family HMM PF00510; quinol oxidase AA3 subunit III 22004 qoxC 2798842 qoxC Listeria monocytogenes serotype 4b str. F2365 quinol oxidase AA3 subunit III YP_012630.1 21393 D 265669 CDS YP_012631.1 46906242 2799365 22006..22338 1 NC_002973.6 identified by similarity to SP:P34959; match to protein family HMM PF03626; quinol oxidase AA3 subunit IV 22338 qoxD 2799365 qoxD Listeria monocytogenes serotype 4b str. F2365 quinol oxidase AA3 subunit IV YP_012631.1 22006 D 265669 CDS YP_012632.1 46906243 2798288 complement(22389..23507) 1 NC_002973.6 identified by similarity to GP:4584121; hypothetical protein 23507 2798288 LMOf2365_0020 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012632.1 22389 R 265669 CDS YP_012633.1 46906244 2798359 23733..25166 1 NC_002973.6 identified by match to protein family HMM PF00232; glycosyl hydrolase 25166 2798359 LMOf2365_0021 Listeria monocytogenes serotype 4b str. F2365 glycosyl hydrolase YP_012633.1 23733 D 265669 CDS YP_012634.1 46906245 2799366 complement(25213..26034) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0018; hypothetical protein 26034 2799366 LMOf2365_0022 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012634.1 25213 R 265669 CDS YP_012635.1 46906246 2799373 26275..27015 1 NC_002973.6 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 27015 2799373 LMOf2365_0023 Listeria monocytogenes serotype 4b str. F2365 GntR family transcriptional regulator YP_012635.1 26275 D 265669 CDS YP_012636.1 46906247 2798866 27031..27432 1 NC_002973.6 PTS system fructose-specific transporter subunit IIA 27432 2798866 LMOf2365_0024 Listeria monocytogenes serotype 4b str. F2365 PTS system fructose-specific transporter subunit IIA YP_012636.1 27031 D 265669 CDS YP_012637.1 46906248 2799375 27432..27920 1 NC_002973.6 identified by match to protein family HMM PF03830; PTS system mannose/fructose/sorbose family transporter subunit IIB 27920 2799375 LMOf2365_0025 Listeria monocytogenes serotype 4b str. F2365 PTS system mannose/fructose/sorbose family transporter subunit IIB YP_012637.1 27432 D 265669 CDS YP_012638.1 46906249 2797033 27943..28746 1 NC_002973.6 identified by similarity to SP:P08187; match to protein family HMM PF03609; PTS system mannose-specific transporter subunit IIC 28746 2797033 LMOf2365_0026 Listeria monocytogenes serotype 4b str. F2365 PTS system mannose-specific transporter subunit IIC YP_012638.1 27943 D 265669 CDS YP_012639.1 46906250 2799369 28727..29548 1 NC_002973.6 identified by similarity to SP:P08188; match to protein family HMM PF03613; PTS system mannose/fructose/sorbose family transporter subunit IID 29548 2799369 LMOf2365_0027 Listeria monocytogenes serotype 4b str. F2365 PTS system mannose/fructose/sorbose family transporter subunit IID YP_012639.1 28727 D 265669 CDS YP_012640.1 46906251 2797771 29576..30280 1 NC_002973.6 identified by similarity to GP:8894743; hypothetical protein 30280 2797771 LMOf2365_0028 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012640.1 29576 D 265669 CDS YP_012641.1 46906252 2799362 30335..30976 1 NC_002973.6 identified by match to protein family HMM PF03932; cutC family protein 30976 2799362 LMOf2365_0029 Listeria monocytogenes serotype 4b str. F2365 cutC family protein YP_012641.1 30335 D 265669 CDS YP_012642.1 46906253 2797316 31181..33085 1 NC_002973.6 identified by similarity to SP:P08722; match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830; PTS system beta-glucoside-specific transporter subunit IIABC 33085 2797316 LMOf2365_0030 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIABC YP_012642.1 31181 D 265669 CDS YP_012643.1 46906254 2798864 33167..34042 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0027; match to protein family HMM PF02016; hypothetical protein 34042 2798864 LMOf2365_0031 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012643.1 33167 D 265669 CDS YP_012644.1 46906255 2797341 complement(34191..34811) 1 NC_002973.6 hypothetical protein 34811 2797341 LMOf2365_0032 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012644.1 34191 R 265669 CDS YP_012645.1 46906256 2799588 complement(35448..36170) 1 NC_002973.6 identified by similarity to SP:P37493; hypothetical protein 36170 2799588 LMOf2365_0034 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012645.1 35448 R 265669 CDS YP_012646.1 46906257 2797428 complement(36172..36885) 1 NC_002973.6 hypothetical protein 36885 2797428 LMOf2365_0035 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012646.1 36172 R 265669 CDS YP_012647.1 46906258 2799058 complement(36872..37636) 1 NC_002973.6 identified by similarity to SP:P37491; hypothetical protein 37636 2799058 LMOf2365_0036 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012647.1 36872 R 265669 CDS YP_012648.1 46906259 2799361 complement(37707..38156) 1 NC_002973.6 identified by similarity to SP:P37490; hypothetical protein 38156 2799361 LMOf2365_0037 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012648.1 37707 R 265669 CDS YP_012649.1 46906260 2797013 38379..38717 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0028; hypothetical protein 38717 2797013 LMOf2365_0038 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012649.1 38379 D 265669 CDS YP_012650.1 46906261 2798854 complement(38754..39563) 1 NC_002973.6 identified by similarity to GP:16412450; match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD superfamily hydrolase 39563 2798854 LMOf2365_0039 Listeria monocytogenes serotype 4b str. F2365 HAD superfamily hydrolase YP_012650.1 38754 R 265669 CDS YP_012651.1 46906262 2798594 complement(39580..40635) 1 NC_002973.6 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 40635 2798594 LMOf2365_0040 Listeria monocytogenes serotype 4b str. F2365 LacI family transcriptional regulator YP_012651.1 39580 R 265669 CDS YP_012652.1 46906263 2799353 40837..41802 1 NC_002973.6 identified by match to protein family HMM PF00480; ROK family protein 41802 2799353 LMOf2365_0041 Listeria monocytogenes serotype 4b str. F2365 ROK family protein YP_012652.1 40837 D 265669 CDS YP_012653.1 46906264 2799354 41799..44201 1 NC_002973.6 glycosyl hydrolase 44201 2799354 LMOf2365_0042 Listeria monocytogenes serotype 4b str. F2365 glycosyl hydrolase YP_012653.1 41799 D 265669 CDS YP_012654.1 46906265 2798815 44214..45572 1 NC_002973.6 identified by similarity to SP:P46317; match to protein family HMM PF02378; match to protein family HMM TIGR00410; PTS system beta-glucoside-specific transporter subunit IIC 45572 2798815 LMOf2365_0043 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIC YP_012654.1 44214 D 265669 CDS YP_012655.1 46906266 2799586 45574..46659 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0034; match to protein family HMM PF01380; SIS domain-containing protein 46659 2799586 LMOf2365_0044 Listeria monocytogenes serotype 4b str. F2365 SIS domain-containing protein YP_012655.1 45574 D 265669 CDS YP_012656.1 46906267 2799360 46891..47916 1 NC_002973.6 catalyzes the formation of putrescine from carbamoyl-putrescine during agmatine degradation; putrescine carbamoyltransferase 47916 argF-1 2799360 argF-1 Listeria monocytogenes serotype 4b str. F2365 putrescine carbamoyltransferase YP_012656.1 46891 D 265669 CDS YP_012657.1 46906268 2799359 47989..49374 1 NC_002973.6 identified by match to protein family HMM PF00324; amino acid permease 49374 2799359 LMOf2365_0046 Listeria monocytogenes serotype 4b str. F2365 amino acid permease YP_012657.1 47989 D 265669 CDS YP_012658.1 46906269 2798863 49361..50455 1 NC_002973.6 catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis; agmatine deiminase 50455 2798863 LMOf2365_0047 Listeria monocytogenes serotype 4b str. F2365 agmatine deiminase YP_012658.1 49361 D 265669 CDS YP_012659.1 46906270 2798862 50468..51409 1 NC_002973.6 catalyzes the reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 51409 arcC 2798862 arcC Listeria monocytogenes serotype 4b str. F2365 carbamate kinase YP_012659.1 50468 D 265669 CDS YP_012660.1 46906271 2798636 51510..52619 1 NC_002973.6 catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis; agmatine deiminase 52619 2798636 LMOf2365_0049 Listeria monocytogenes serotype 4b str. F2365 agmatine deiminase YP_012660.1 51510 D 265669 CDS YP_012661.1 46906272 2799456 52636..53415 1 NC_002973.6 phosphosugar-binding protein 53415 2799456 LMOf2365_0050 Listeria monocytogenes serotype 4b str. F2365 phosphosugar-binding protein YP_012661.1 52636 D 265669 CDS YP_012662.1 46906273 2799356 53519..54178 1 NC_002973.6 identified by similarity to SP:P09548; match to protein family HMM PF00597; DedA family protein 54178 2799356 LMOf2365_0051 Listeria monocytogenes serotype 4b str. F2365 DedA family protein YP_012662.1 53519 D 265669 CDS YP_012663.1 46906274 2799357 54257..55489 1 NC_002973.6 catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase 55489 arcA 2799357 arcA Listeria monocytogenes serotype 4b str. F2365 arginine deiminase YP_012663.1 54257 D 265669 CDS YP_012664.1 46906275 2798861 55768..56061 1 NC_002973.6 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 56061 rpsF 2798861 rpsF Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S6 YP_012664.1 55768 D 265669 CDS YP_012665.1 46906276 2799368 56117..56653 1 NC_002973.6 identified by similarity to SP:P37455; match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein 56653 ssb-1 2799368 ssb-1 Listeria monocytogenes serotype 4b str. F2365 single-strand binding protein YP_012665.1 56117 D 265669 CDS YP_012666.1 46906277 2799465 56697..56936 1 NC_002973.6 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 56936 rpsR 2799465 rpsR Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S18 YP_012666.1 56697 D 265669 CDS YP_012667.1 46906278 2798344 57089..57700 1 NC_002973.6 lipoprotein 57700 2798344 LMOf2365_0056 Listeria monocytogenes serotype 4b str. F2365 lipoprotein YP_012667.1 57089 D 265669 CDS YP_012668.1 46906279 2799371 57957..58571 1 NC_002973.6 essential for production of a quorum sensing autoinducing peptide; accessory gene regulator protein 58571 2799371 LMOf2365_0057 Listeria monocytogenes serotype 4b str. F2365 accessory gene regulator protein YP_012668.1 57957 D 265669 CDS YP_012669.1 46906280 2798317 58564..58716 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0042; accessory gene regulator protein D 58716 2798317 LMOf2365_0058 Listeria monocytogenes serotype 4b str. F2365 accessory gene regulator protein D YP_012669.1 58564 D 265669 CDS YP_012670.1 46906281 2798816 58812..60107 1 NC_002973.6 identified by similarity to GP:1916243; match to protein family HMM PF02518; accessory gene regulator protein C 60107 agrC 2798816 agrC Listeria monocytogenes serotype 4b str. F2365 accessory gene regulator protein C YP_012670.1 58812 D 265669 CDS YP_012671.1 46906282 2798696 60126..60854 1 NC_002973.6 identified by similarity to SP:P13131; match to protein family HMM PF00072; match to protein family HMM PF04397; accessory gene regulator protein A 60854 agrA 2798696 agrA Listeria monocytogenes serotype 4b str. F2365 accessory gene regulator protein A YP_012671.1 60126 D 265669 CDS YP_012672.1 46906283 2798817 61021..62994 1 NC_002973.6 identified by match to protein family HMM PF01368; match to protein family HMM PF02272; DHH subfamily 1 protein 62994 2798817 LMOf2365_0061 Listeria monocytogenes serotype 4b str. F2365 DHH subfamily 1 protein YP_012672.1 61021 D 265669 CDS YP_012673.1 46906284 2798396 62997..63443 1 NC_002973.6 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 63443 rplI 2798396 rplI Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L9 YP_012673.1 62997 D 265669 CDS YP_012674.1 46906285 2799358 63468..64820 1 NC_002973.6 unwinds double stranded DNA; replicative DNA helicase 64820 dnaB 2799358 dnaB Listeria monocytogenes serotype 4b str. F2365 replicative DNA helicase YP_012674.1 63468 D 265669 CDS YP_012675.1 46906286 2799367 64876..65025 1 NC_002973.6 hypothetical protein 65025 2799367 LMOf2365_0064 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012675.1 64876 D 265669 CDS YP_012676.1 46906287 2797594 65079..66371 1 NC_002973.6 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 66371 purA 2797594 purA Listeria monocytogenes serotype 4b str. F2365 adenylosuccinate synthetase YP_012676.1 65079 D 265669 CDS YP_012677.1 46906288 2798859 66420..66572 1 NC_002973.6 hypothetical protein 66572 2798859 LMOf2365_0066 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012677.1 66420 D 265669 CDS YP_012678.1 46906289 2798700 66674..66967 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0049; match to protein family HMM PF06013; hypothetical protein 66967 2798700 LMOf2365_0067 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012678.1 66674 D 265669 CDS YP_012679.1 46906290 2798858 67116..70322 1 NC_002973.6 identified by match to protein family HMM TIGR01612; hypothetical protein 70322 2798858 LMOf2365_0068 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012679.1 67116 D 265669 CDS YP_012680.1 46906291 2799370 70312..70827 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0051; hypothetical protein 70827 2799370 LMOf2365_0069 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012680.1 70312 D 265669 CDS YP_012681.1 46906292 2798860 70845..71096 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0052; hypothetical protein 71096 2798860 LMOf2365_0070 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012681.1 70845 D 265669 CDS YP_012682.1 46906293 2798855 71118..72314 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0053; hypothetical protein 72314 2798855 LMOf2365_0071 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012682.1 71118 D 265669 CDS YP_012683.1 46906294 2798020 72328..76821 1 NC_002973.6 identified by match to protein family HMM PF01580; match to protein family HMM TIGR01612; diarrheal toxin/FtsK/SpoIIIE family protein 76821 2798020 LMOf2365_0072 Listeria monocytogenes serotype 4b str. F2365 diarrheal toxin/FtsK/SpoIIIE family protein YP_012683.1 72328 D 265669 CDS YP_012684.1 46906295 2799352 76841..77236 1 NC_002973.6 hypothetical protein 77236 2799352 LMOf2365_0073 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012684.1 76841 D 265669 CDS YP_012685.1 46906296 2799355 77229..77528 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0056; hypothetical protein 77528 2799355 LMOf2365_0074 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012685.1 77229 D 265669 CDS YP_012686.1 46906297 2798857 77525..78226 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0057; hypothetical protein 78226 2798857 LMOf2365_0075 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012686.1 77525 D 265669 CDS YP_012687.1 46906298 2798851 78227..78559 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0058; hypothetical protein 78559 2798851 LMOf2365_0076 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012687.1 78227 D 265669 CDS YP_012688.1 46906299 2798135 78573..80249 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0059; hypothetical protein 80249 2798135 LMOf2365_0077 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012688.1 78573 D 265669 CDS YP_012689.1 46906300 2798272 80262..80651 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0063; hypothetical protein 80651 2798272 LMOf2365_0078 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012689.1 80262 D 265669 CDS YP_012690.1 46906301 2799174 80789..81199 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0064; hypothetical protein 81199 2799174 LMOf2365_0079 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012690.1 80789 D 265669 CDS YP_012691.1 46906302 2797991 81384..81638 1 NC_002973.6 hypothetical protein 81638 2797991 LMOf2365_0080 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012691.1 81384 D 265669 CDS YP_012692.1 46906303 2798856 81770..82093 1 NC_002973.6 identified by similarity to GP:19715005; hypothetical protein 82093 2798856 LMOf2365_0081 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012692.1 81770 D 265669 CDS YP_012693.1 46906304 2798541 82350..84047 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0059; hypothetical protein 84047 2798541 LMOf2365_0082 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012693.1 82350 D 265669 CDS YP_012694.1 46906305 2798514 84049..84483 1 NC_002973.6 identified by similarity to SP:P40737; hypothetical protein 84483 2798514 LMOf2365_0083 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012694.1 84049 D 265669 CDS YP_012695.1 46906306 2799137 84907..85617 1 NC_002973.6 hypothetical protein 85617 2799137 LMOf2365_0084 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012695.1 84907 D 265669 CDS YP_012696.1 46906307 2799350 85618..85941 1 NC_002973.6 hypothetical protein 85941 2799350 LMOf2365_0085 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012696.1 85618 D 265669 CDS YP_012697.1 46906308 2798496 86108..86401 1 NC_002973.6 hypothetical protein 86401 2798496 LMOf2365_0086 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012697.1 86108 D 265669 CDS YP_012698.1 46906309 2798401 86538..87260 1 NC_002973.6 hypothetical protein 87260 2798401 LMOf2365_0087 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012698.1 86538 D 265669 CDS YP_012699.1 46906310 2798536 87500..87682 1 NC_002973.6 hypothetical protein 87682 2798536 LMOf2365_0088 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012699.1 87500 D 265669 CDS YP_012700.1 46906311 2799114 88139..88240 1 NC_002973.6 hypothetical protein 88240 2799114 LMOf2365_0089 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012700.1 88139 D 265669 CDS YP_012701.1 46906312 2798492 88367..88651 1 NC_002973.6 hypothetical protein 88651 2798492 LMOf2365_0090 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012701.1 88367 D 265669 CDS YP_012702.1 46906313 2799156 88639..89088 1 NC_002973.6 hypothetical protein 89088 2799156 LMOf2365_0091 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012702.1 88639 D 265669 CDS YP_012703.1 46906314 2799112 89326..90099 1 NC_002973.6 identified by similarity to SP:P11435; transferase 90099 2799112 LMOf2365_0092 Listeria monocytogenes serotype 4b str. F2365 transferase YP_012703.1 89326 D 265669 CDS YP_012704.1 46906315 2798464 90096..91148 1 NC_002973.6 identified by similarity to SP:P06134; match to protein family HMM PF01035; match to protein family HMM PF02805; match to protein family HMM TIGR00589; Ada regulatory protein 91148 ada 2798464 ada Listeria monocytogenes serotype 4b str. F2365 Ada regulatory protein YP_012704.1 90096 D 265669 CDS YP_012705.1 46906316 2798471 complement(91170..91883) 1 NC_002973.6 identified by match to protein family HMM PF00805; pentapeptide repeat-containing protein 91883 2798471 LMOf2365_0094 Listeria monocytogenes serotype 4b str. F2365 pentapeptide repeat-containing protein YP_012705.1 91170 R 265669 CDS YP_012706.1 46906317 2798505 91939..92895 1 NC_002973.6 identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-isomer specific 2-hydroxyacid dehydrogenase 92895 2798505 LMOf2365_0095 Listeria monocytogenes serotype 4b str. F2365 D-isomer specific 2-hydroxyacid dehydrogenase YP_012706.1 91939 D 265669 CDS YP_012707.1 46906318 2799351 93236..94759 1 NC_002973.6 identified by similarity to GP:16412606; hypothetical protein 94759 2799351 LMOf2365_0096 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012707.1 93236 D 265669 CDS YP_012708.1 46906319 2799128 94741..95118 1 NC_002973.6 hypothetical protein 95118 2799128 LMOf2365_0097 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012708.1 94741 D 265669 CDS YP_012709.1 46906320 2799200 95591..95935 1 NC_002973.6 hypothetical protein 95935 2799200 LMOf2365_0098 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012709.1 95591 D 265669 CDS YP_012710.1 46906321 2799347 96061..96402 1 NC_002973.6 hypothetical protein 96402 2799347 LMOf2365_0099 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012710.1 96061 D 265669 CDS YP_012711.1 46906322 2798457 complement(96469..96837) 1 NC_002973.6 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 96837 2798457 LMOf2365_0100 Listeria monocytogenes serotype 4b str. F2365 MerR family transcriptional regulator YP_012711.1 96469 R 265669 CDS YP_012712.1 46906323 2798447 complement(96893..97876) 1 NC_002973.6 identified by match to protein family HMM PF00248; aldo/keto reductase oxidoreductase 97876 2798447 LMOf2365_0101 Listeria monocytogenes serotype 4b str. F2365 aldo/keto reductase oxidoreductase YP_012712.1 96893 R 265669 CDS YP_012713.1 46906324 2797834 98267..98956 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0129; hypothetical protein 98956 2797834 LMOf2365_0102 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012713.1 98267 D 265669 CDS YP_012714.1 46906325 2797978 99033..104912 1 NC_002973.6 identified by similarity to GP:16412551; match to protein family HMM TIGR01612; hypothetical protein 104912 2797978 LMOf2365_0103 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012714.1 99033 D 265669 CDS YP_012715.1 46906326 2799349 104909..107218 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0131; hypothetical protein 107218 2799349 LMOf2365_0104 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012715.1 104909 D 265669 CDS YP_012716.1 46906327 2799346 107275..107517 1 NC_002973.6 identified by similarity to SP:Q05366; match to protein family HMM PF00137; ATP synthase F0, C subunit family protein 107517 2799346 LMOf2365_0105 Listeria monocytogenes serotype 4b str. F2365 ATP synthase F0, C subunit family protein YP_012716.1 107275 D 265669 CDS YP_012717.1 46906328 2799348 107529..108560 1 NC_002973.6 ATP synthase F1 subunit delta 108560 2799348 LMOf2365_0106 Listeria monocytogenes serotype 4b str. F2365 ATP synthase F1 subunit delta YP_012717.1 107529 D 265669 CDS YP_012718.1 46906329 2797983 108557..110053 1 NC_002973.6 produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 110053 atpA-1 2797983 atpA-1 Listeria monocytogenes serotype 4b str. F2365 F0F1 ATP synthase subunit alpha YP_012718.1 108557 D 265669 CDS YP_012719.1 46906330 2799344 110050..110919 1 NC_002973.6 identified by match to protein family HMM PF00231; ATP synthase F1 subunit gamma 110919 2799344 LMOf2365_0108 Listeria monocytogenes serotype 4b str. F2365 ATP synthase F1 subunit gamma YP_012719.1 110050 D 265669 CDS YP_012720.1 46906331 2799343 110920..112290 1 NC_002973.6 produces ATP from ADP in the presence of a proton gradient across the membrane; the beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 112290 atpD-1 2799343 atpD-1 Listeria monocytogenes serotype 4b str. F2365 F0F1 ATP synthase subunit beta YP_012720.1 110920 D 265669 CDS YP_012721.1 46906332 2799345 112303..112635 1 NC_002973.6 identified by match to protein family HMM PF02823; ATP synthase F1 subunit epsilon 112635 2799345 LMOf2365_0110 Listeria monocytogenes serotype 4b str. F2365 ATP synthase F1 subunit epsilon YP_012721.1 112303 D 265669 CDS YP_012722.1 46906333 2797764 112616..113176 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0138; hypothetical protein 113176 2797764 LMOf2365_0111 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012722.1 112616 D 265669 CDS YP_012723.1 46906334 2797763 113351..113983 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0140; hypothetical protein 113983 2797763 LMOf2365_0112 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012723.1 113351 D 265669 CDS YP_012724.1 46906335 2797805 114281..115246 1 NC_002973.6 identified by similarity to GP:5669855; match to protein family HMM PF03610; match to protein family HMM PF03830; match to protein family HMM TIGR00824; PTS system mannose-specific transporter subunit IIAB 115246 manL 2797805 manL Listeria monocytogenes serotype 4b str. F2365 PTS system mannose-specific transporter subunit IIAB YP_012724.1 114281 D 265669 CDS YP_012725.1 46906336 2799746 115270..116076 1 NC_002973.6 identified by similarity to SP:P08187; match to protein family HMM PF03609; PTS system mannose/fructose/sorbose family transporter subunit IIC 116076 2799746 LMOf2365_0114 Listeria monocytogenes serotype 4b str. F2365 PTS system mannose/fructose/sorbose family transporter subunit IIC YP_012725.1 115270 D 265669 CDS YP_012726.1 46906337 2797982 116098..117009 1 NC_002973.6 identified by similarity to SP:P08188; match to protein family HMM PF03613; match to protein family HMM TIGR00828; PTS system mannose/fructose/sorbose family transporter subunit IID 117009 2797982 LMOf2365_0115 Listeria monocytogenes serotype 4b str. F2365 PTS system mannose/fructose/sorbose family transporter subunit IID YP_012726.1 116098 D 265669 CDS YP_012727.1 46906338 2797688 117136..117525 1 NC_002973.6 identified by similarity to GP:16412565; match to protein family HMM PF06115; hypothetical protein 117525 2797688 LMOf2365_0116 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012727.1 117136 D 265669 CDS YP_012728.1 46906339 2797781 117647..117997 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0145; hypothetical protein 117997 2797781 LMOf2365_0117 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012728.1 117647 D 265669 CDS YP_012729.1 46906340 2797660 complement(118038..119555) 1 NC_002973.6 hypothetical protein 119555 2797660 LMOf2365_0118 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012729.1 118038 R 265669 CDS YP_012730.1 46906341 2797848 complement(119670..119963) 1 NC_002973.6 identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 119963 2797848 LMOf2365_0119 Listeria monocytogenes serotype 4b str. F2365 ArsR family transcriptional regulator YP_012730.1 119670 R 265669 CDS YP_012731.1 46906342 2797985 120075..120365 1 NC_002973.6 identified by match to protein family HMM PF02619; match to protein family HMM PF03992; YneC family protein 120365 2797985 LMOf2365_0120 Listeria monocytogenes serotype 4b str. F2365 YneC family protein YP_012731.1 120075 D 265669 CDS YP_012732.1 46906343 2797995 120379..121011 1 NC_002973.6 identified by match to protein family HMM PF00881; nitroreductase 121011 2797995 LMOf2365_0121 Listeria monocytogenes serotype 4b str. F2365 nitroreductase YP_012732.1 120379 D 265669 CDS YP_012733.1 46906344 2797655 121107..121478 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0150; hypothetical protein 121478 2797655 LMOf2365_0122 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012733.1 121107 D 265669 CDS YP_012734.1 46906345 2797877 121757..124039 1 NC_002973.6 identified by similarity to GP:2696017; match to protein family HMM PF00041; match to protein family HMM PF00704; match to protein family HMM PF02839; chitinase B 124039 chiB 2797877 chiB Listeria monocytogenes serotype 4b str. F2365 chitinase B YP_012734.1 121757 D 265669 CDS YP_012735.1 46906346 2797989 124142..125044 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0765; match to protein family HMM PF00480; ROK family protein 125044 2797989 LMOf2365_0124 Listeria monocytogenes serotype 4b str. F2365 ROK family protein YP_012735.1 124142 D 265669 CDS YP_012736.1 46906347 2798132 complement(125069..126850) 1 NC_002973.6 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 126850 2798132 LMOf2365_0125 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein/permease YP_012736.1 125069 R 265669 CDS YP_012737.1 46906348 2798003 complement(126843..128609) 1 NC_002973.6 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 128609 2798003 LMOf2365_0126 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein/permease YP_012737.1 126843 R 265669 CDS YP_012738.1 46906349 2797388 128728..129561 1 NC_002973.6 identified by match to protein family HMM PF00165; match to protein family HMM PF02311; AraC family transcriptional regulator 129561 2797388 LMOf2365_0127 Listeria monocytogenes serotype 4b str. F2365 AraC family transcriptional regulator YP_012738.1 128728 D 265669 CDS YP_012739.1 46906350 2798118 129704..130711 1 NC_002973.6 identified by similarity to GP:2853612; lipase 130711 2798118 LMOf2365_0128 Listeria monocytogenes serotype 4b str. F2365 lipase YP_012739.1 129704 D 265669 CDS YP_012740.1 46906351 2797987 130827..131525 1 NC_002973.6 identified by match to protein family HMM PF00563; EAL domain-containing protein 131525 2797987 LMOf2365_0129 Listeria monocytogenes serotype 4b str. F2365 EAL domain-containing protein YP_012740.1 130827 D 265669 CDS YP_012741.1 46906352 2798127 complement(131495..132190) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0157; hypothetical protein 132190 2798127 LMOf2365_0130 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012741.1 131495 R 265669 CDS YP_012742.1 46906353 2798265 complement(132409..132870) 1 NC_002973.6 identified by match to protein family HMM PF06114; hypothetical protein 132870 2798265 LMOf2365_0131 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012742.1 132409 R 265669 CDS YP_012743.1 46906354 2798123 complement(132867..133202) 1 NC_002973.6 identified by match to protein family HMM PF01381; repressor protein 133202 2798123 LMOf2365_0132 Listeria monocytogenes serotype 4b str. F2365 repressor protein YP_012743.1 132867 R 265669 CDS YP_012744.1 46906355 2798267 133419..133847 1 NC_002973.6 antigen D 133847 lmaD 2798267 lmaD Listeria monocytogenes serotype 4b str. F2365 antigen D YP_012744.1 133419 D 265669 CDS YP_012745.1 46906356 2799784 133859..134275 1 NC_002973.6 identified by match to protein family HMM TIGR01637; antigen C 134275 lmaC 2799784 lmaC Listeria monocytogenes serotype 4b str. F2365 antigen C YP_012745.1 133859 D 265669 CDS YP_012746.1 46906357 2797997 134555..134944 1 NC_002973.6 identified by similarity to OMNI:NTL01LM0117; antigen B 134944 lmaB 2797997 lmaB Listeria monocytogenes serotype 4b str. F2365 antigen B YP_012746.1 134555 D 265669 CDS YP_012747.1 46906358 2798001 134957..135469 1 NC_002973.6 identified by similarity to OMNI:NTL01LM0118; antigen A 135469 lmaA 2798001 lmaA Listeria monocytogenes serotype 4b str. F2365 antigen A YP_012747.1 134957 D 265669 CDS YP_012748.1 46906359 2797993 135517..135819 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0164; hypothetical protein 135819 2797993 LMOf2365_0137 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012748.1 135517 D 265669 CDS YP_012749.1 46906360 2799790 135861..136265 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0165; hypothetical protein 136265 2799790 LMOf2365_0138 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012749.1 135861 D 265669 CDS YP_012750.1 46906361 2799837 136252..138120 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0166; hypothetical protein 138120 2799837 LMOf2365_0139 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012750.1 136252 D 265669 CDS YP_012751.1 46906362 2799839 138117..138935 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0167; hypothetical protein 138935 2799839 LMOf2365_0140 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012751.1 138117 D 265669 CDS YP_012752.1 46906363 2798005 138945..140081 1 NC_002973.6 identified by match to protein family HMM TIGR01665; minor structural protein 140081 2798005 LMOf2365_0141 Listeria monocytogenes serotype 4b str. F2365 minor structural protein YP_012752.1 138945 D 265669 CDS YP_012753.1 46906364 2799825 140071..140370 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0169; hypothetical protein 140370 2799825 LMOf2365_0142 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012753.1 140071 D 265669 CDS YP_012754.1 46906365 2798836 140385..140960 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0170; hypothetical protein 140960 2798836 LMOf2365_0143 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012754.1 140385 D 265669 CDS YP_012755.1 46906366 2798834 140975..141454 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0171; hypothetical protein 141454 2798834 LMOf2365_0144 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012755.1 140975 D 265669 CDS YP_012756.1 46906367 2798841 141451..141987 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0172; hypothetical protein 141987 2798841 LMOf2365_0145 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012756.1 141451 D 265669 CDS YP_012757.1 46906368 2798835 142006..142428 1 NC_002973.6 identified by match to protein family HMM PF05105; match to protein family HMM TIGR01593; holin 142428 2798835 LMOf2365_0146 Listeria monocytogenes serotype 4b str. F2365 holin YP_012757.1 142006 D 265669 CDS YP_012758.1 46906369 2798837 142409..143137 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0174; match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase 143137 2798837 LMOf2365_0147 Listeria monocytogenes serotype 4b str. F2365 N-acetylmuramoyl-L-alanine amidase YP_012758.1 142409 D 265669 CDS YP_012759.1 46906370 2798008 complement(143175..145523) 1 NC_002973.6 identified by match to protein family HMM PF00149; match to protein family HMM PF00746; match to protein family HMM PF02872; match to protein family HMM TIGR01167; Ser/Thr protein phosphatase 145523 2798008 LMOf2365_0148 Listeria monocytogenes serotype 4b str. F2365 Ser/Thr protein phosphatase YP_012759.1 143175 R 265669 CDS YP_012760.1 46906371 2798840 145717..146466 1 NC_002973.6 identified by match to protein family HMM PF00563; EAL domain-containing protein 146466 2798840 LMOf2365_0149 Listeria monocytogenes serotype 4b str. F2365 EAL domain-containing protein YP_012760.1 145717 D 265669 CDS YP_012761.1 46906372 2798012 complement(146536..148044) 1 NC_002973.6 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5-monophosphate dehydrogenase 148044 2798012 LMOf2365_0150 Listeria monocytogenes serotype 4b str. F2365 inosine 5-monophosphate dehydrogenase YP_012761.1 146536 R 265669 CDS YP_012762.1 46906373 2798838 148211..148444 1 NC_002973.6 hypothetical protein 148444 2798838 LMOf2365_0151 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012762.1 148211 D 265669 CDS YP_012763.1 46906374 2798839 148456..148734 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 148734 2798839 LMOf2365_0152 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_012763.1 148456 D 265669 CDS YP_012764.1 46906375 2798844 149060..150634 1 NC_002973.6 identified by similarity to SP:P42061; match to protein family HMM PF00496; oligopeptide ABC transporter substrate-binding protein 150634 2798844 LMOf2365_0153 Listeria monocytogenes serotype 4b str. F2365 oligopeptide ABC transporter substrate-binding protein YP_012764.1 149060 D 265669 CDS YP_012765.1 46906376 2798010 150736..151686 1 NC_002973.6 identified by similarity to SP:P42062; match to protein family HMM PF00528; oligopeptide ABC transporter permease 151686 2798010 LMOf2365_0154 Listeria monocytogenes serotype 4b str. F2365 oligopeptide ABC transporter permease YP_012765.1 150736 D 265669 CDS YP_012766.1 46906377 2798848 151697..152590 1 NC_002973.6 identified by similarity to SP:P42063; match to protein family HMM PF00528; oligopeptide ABC transporter permease 152590 2798848 LMOf2365_0155 Listeria monocytogenes serotype 4b str. F2365 oligopeptide ABC transporter permease YP_012766.1 151697 D 265669 CDS YP_012767.1 46906378 2798843 152790..153074 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0183; hypothetical protein 153074 2798843 LMOf2365_0156 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012767.1 152790 D 265669 CDS YP_012768.1 46906379 2798846 153075..153443 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0184; hypothetical protein 153443 2798846 LMOf2365_0157 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012768.1 153075 D 265669 CDS YP_012769.1 46906380 2798852 154753..154995 1 NC_002973.6 identified by similarity to GP:19712958; hypothetical protein 154995 2798852 LMOf2365_0159 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012769.1 154753 D 265669 CDS YP_012770.1 46906381 2798847 155016..155459 1 NC_002973.6 hypothetical protein 155459 2798847 LMOf2365_0160 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012770.1 155016 D 265669 CDS YP_012771.1 46906382 2798853 155691..155927 1 NC_002973.6 hypothetical protein 155927 2798853 LMOf2365_0161 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012771.1 155691 D 265669 CDS YP_012772.1 46906383 2798849 155933..156166 1 NC_002973.6 identified by similarity to GP:15622581; hypothetical protein 156166 2798849 LMOf2365_0162 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012772.1 155933 D 265669 CDS YP_012773.1 46906384 2798850 156477..156581 1 NC_002973.6 hypothetical protein 156581 2798850 LMOf2365_0163 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012773.1 156477 D 265669 CDS YP_012774.1 46906385 2798784 156716..156865 1 NC_002973.6 hypothetical protein 156865 2798784 LMOf2365_0164 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012774.1 156716 D 265669 CDS YP_012775.1 46906386 2798798 157006..157377 1 NC_002973.6 hypothetical protein 157377 2798798 LMOf2365_0165 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012775.1 157006 D 265669 CDS YP_012776.1 46906387 2798803 157421..157732 1 NC_002973.6 hypothetical protein 157732 2798803 LMOf2365_0166 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012776.1 157421 D 265669 CDS YP_012777.1 46906388 2799587 complement(157865..159520) 1 NC_002973.6 identified by match to protein family HMM PF00496; solute-binding family 5 protein 159520 2799587 LMOf2365_0167 Listeria monocytogenes serotype 4b str. F2365 solute-binding family 5 protein YP_012777.1 157865 R 265669 CDS YP_012778.1 46906389 2798790 159743..160684 1 NC_002973.6 identified by similarity to SP:O05703; match to protein family HMM PF01297; zinc ABC transporter substrate-binding protein 160684 2798790 LMOf2365_0168 Listeria monocytogenes serotype 4b str. F2365 zinc ABC transporter substrate-binding protein YP_012778.1 159743 D 265669 CDS YP_012779.1 46906390 2798770 160697..161401 1 NC_002973.6 identified by similarity to SP:Q9XDA6; match to protein family HMM PF00005; zinc ABC transporter ATP-binding protein 161401 zurA-1 2798770 zurA-1 Listeria monocytogenes serotype 4b str. F2365 zinc ABC transporter ATP-binding protein YP_012779.1 160697 D 265669 CDS YP_012780.1 46906391 2799609 161350..162156 1 NC_002973.6 identified by similarity to SP:P39832; match to protein family HMM PF00950; zinc ABC transporter permease 162156 zurM-1 2799609 zurM-1 Listeria monocytogenes serotype 4b str. F2365 zinc ABC transporter permease YP_012780.1 161350 D 265669 CDS YP_012781.1 46906392 2799582 complement(162160..162840) 1 NC_002973.6 cyclic nucleotide-binding protein 162840 2799582 LMOf2365_0171 Listeria monocytogenes serotype 4b str. F2365 cyclic nucleotide-binding protein YP_012781.1 162160 R 265669 CDS YP_012782.1 46906393 2798762 163118..165457 1 NC_002973.6 hypothetical protein 165457 2798762 LMOf2365_0172 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012782.1 163118 D 265669 CDS YP_012783.1 46906394 2799585 165502..166314 1 NC_002973.6 identified by match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; cof family hydrolase 166314 2799585 LMOf2365_0173 Listeria monocytogenes serotype 4b str. F2365 cof family hydrolase YP_012783.1 165502 D 265669 CDS YP_012784.1 46906395 2798733 166599..168668 1 NC_002973.6 identified by match to protein family HMM PF05737; match to protein family HMM PF05738; match to protein family HMM TIGR01167; cell wall surface anchor family protein 168668 2798733 LMOf2365_0174 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_012784.1 166599 D 265669 CDS YP_012785.1 46906396 2798027 168859..170601 1 NC_002973.6 identified by match to protein family HMM PF05737; match to protein family HMM PF05738; hypothetical protein 170601 2798027 LMOf2365_0175 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012785.1 168859 D 265669 CDS YP_012786.1 46906397 2798023 complement(170645..171481) 1 NC_002973.6 identified by match to protein family HMM PF01740; STAS domain-containing protein 171481 2798023 LMOf2365_0176 Listeria monocytogenes serotype 4b str. F2365 STAS domain-containing protein YP_012786.1 170645 R 265669 CDS YP_012787.1 46906398 2798714 171698..172690 1 NC_002973.6 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 172690 holB 2798714 holB Listeria monocytogenes serotype 4b str. F2365 DNA polymerase III subunit delta' YP_012787.1 171698 D 265669 CDS YP_012788.1 46906399 2799459 172696..173529 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0204; match to protein family HMM PF04468; hypothetical protein 173529 2799459 LMOf2365_0178 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012788.1 172696 D 265669 CDS YP_012789.1 46906400 2798651 173540..173929 1 NC_002973.6 in Bacillus subtilis this protein is involved in the negative regulation of DNA replication initiation; interacts with DnaN and DnaA; DNA replication intiation control protein YabA 173929 2798651 LMOf2365_0179 Listeria monocytogenes serotype 4b str. F2365 DNA replication intiation control protein YabA YP_012789.1 173540 D 265669 CDS YP_012790.1 46906401 2799460 173978..174739 1 NC_002973.6 identified by similarity to SP:P37543; hypothetical protein 174739 2799460 LMOf2365_0180 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012790.1 173978 D 265669 CDS YP_012791.1 46906402 2799458 174723..174992 1 NC_002973.6 identified by similarity to OMNI:EF2693; match to protein family HMM PF01541; GIY-YIG nuclease superfamily protein 174992 2799458 LMOf2365_0181 Listeria monocytogenes serotype 4b str. F2365 GIY-YIG nuclease superfamily protein YP_012791.1 174723 D 265669 CDS YP_012792.1 46906403 2798678 174989..175870 1 NC_002973.6 identified by similarity to GP:16412629; match to protein family HMM PF00590; match to protein family HMM TIGR00096; tetrapyrrole methylase 175870 2798678 LMOf2365_0182 Listeria monocytogenes serotype 4b str. F2365 tetrapyrrole methylase YP_012792.1 174989 D 265669 CDS YP_012793.1 46906404 2798662 complement(175915..176199) 1 NC_002973.6 identified by similarity to SP:P08874; match to protein family HMM PF04014; match to protein family HMM TIGR01439; transition state regulatory protein AbrB 176199 2798662 LMOf2365_0183 Listeria monocytogenes serotype 4b str. F2365 transition state regulatory protein AbrB YP_012793.1 175915 R 265669 CDS YP_012794.1 46906405 2798625 176313..177170 1 NC_002973.6 identified by similarity to GP:2226001; glucose uptake protein 177170 2798625 LMOf2365_0184 Listeria monocytogenes serotype 4b str. F2365 glucose uptake protein YP_012794.1 176313 D 265669 CDS YP_012795.1 46906406 2799464 177238..178500 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0211; hypothetical protein 178500 2799464 LMOf2365_0185 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012795.1 177238 D 265669 CDS YP_012796.1 46906407 2798629 complement(178648..179913) 1 NC_002973.6 identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein 179913 2798629 LMOf2365_0186 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_012796.1 178648 R 265669 CDS YP_012797.1 46906408 2798031 180191..181051 1 NC_002973.6 identified by similarity to GP:2226001; glucose uptake protein 181051 2798031 LMOf2365_0187 Listeria monocytogenes serotype 4b str. F2365 glucose uptake protein YP_012797.1 180191 D 265669 CDS YP_012798.1 46906409 2798033 181120..183117 1 NC_002973.6 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 183117 metG 2798033 metG Listeria monocytogenes serotype 4b str. F2365 methionyl-tRNA synthetase YP_012798.1 181120 D 265669 CDS YP_012799.1 46906410 2798614 183281..184495 1 NC_002973.6 identified by similarity to SP:P16557; match to protein family HMM PF00480; xylose repressor protein 184495 2798614 LMOf2365_0189 Listeria monocytogenes serotype 4b str. F2365 xylose repressor protein YP_012799.1 183281 D 265669 CDS YP_012800.1 46906411 2798602 184531..185409 1 NC_002973.6 identified by match to protein family HMM PF00528; sugar ABC transporter permease 185409 2798602 LMOf2365_0190 Listeria monocytogenes serotype 4b str. F2365 sugar ABC transporter permease YP_012800.1 184531 D 265669 CDS YP_012801.1 46906412 2798565 185409..186257 1 NC_002973.6 identified by match to protein family HMM PF00528; sugar ABC transporter permease 186257 2798565 LMOf2365_0191 Listeria monocytogenes serotype 4b str. F2365 sugar ABC transporter permease YP_012801.1 185409 D 265669 CDS YP_012802.1 46906413 2798573 186285..187541 1 NC_002973.6 identified by match to protein family HMM PF01547; sugar ABC transporter substrate-binding protein 187541 2798573 LMOf2365_0192 Listeria monocytogenes serotype 4b str. F2365 sugar ABC transporter substrate-binding protein YP_012802.1 186285 D 265669 CDS YP_012803.1 46906414 2798587 187624..190926 1 NC_002973.6 identified by match to protein family HMM PF01055; glycosyl hydrolase 190926 2798587 LMOf2365_0193 Listeria monocytogenes serotype 4b str. F2365 glycosyl hydrolase YP_012803.1 187624 D 265669 CDS YP_012804.1 46906415 2797947 190929..193220 1 NC_002973.6 identified by similarity to SP:Q9F234; match to protein family HMM PF01055; alpha-glucosidase 193220 2797947 LMOf2365_0194 Listeria monocytogenes serotype 4b str. F2365 alpha-glucosidase YP_012804.1 190929 D 265669 CDS YP_012805.1 46906416 2797956 193224..194885 1 NC_002973.6 identified by similarity to SP:P21332; match to protein family HMM PF00128; oligo-1,6-glucosidase 194885 malL-1 2797956 malL-1 Listeria monocytogenes serotype 4b str. F2365 oligo-1,6-glucosidase YP_012805.1 193224 D 265669 CDS YP_012806.1 46906417 2799712 194958..195755 1 NC_002973.6 identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010; TatD family deoxyribonuclease 195755 2799712 LMOf2365_0196 Listeria monocytogenes serotype 4b str. F2365 TatD family deoxyribonuclease YP_012806.1 194958 D 265669 CDS YP_012807.1 46906418 2797968 196047..197273 1 NC_002973.6 identified by similarity to SP:P37546; match to protein family HMM PF03990; hypothetical protein 197273 2797968 LMOf2365_0197 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012807.1 196047 D 265669 CDS YP_012808.1 46906419 2799040 197375..197950 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0224; match to protein family HMM PF01751; match to protein family HMM TIGR00334; primase-like protein 197950 2799040 LMOf2365_0198 Listeria monocytogenes serotype 4b str. F2365 primase-like protein YP_012808.1 197375 D 265669 CDS YP_012809.1 46906420 2798558 197943..198830 1 NC_002973.6 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 198830 ksgA 2798558 ksgA Listeria monocytogenes serotype 4b str. F2365 dimethyladenosine transferase YP_012809.1 197943 D 265669 CDS YP_012810.1 46906421 2797525 198950..199207 1 NC_002973.6 identified by similarity to SP:P37466; match to protein family HMM PF06257; hypothetical protein 199207 2797525 LMOf2365_0200 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012810.1 198950 D 265669 CDS YP_012811.1 46906422 2797452 199346..200227 1 NC_002973.6 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 200227 ipk 2797452 ipk Listeria monocytogenes serotype 4b str. F2365 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_012811.1 199346 D 265669 CDS YP_012812.1 46906423 2797465 200249..200986 1 NC_002973.6 identified by similarity to OMNI:VC1285; match to protein family HMM PF04794; hypothetical protein 200986 2797465 LMOf2365_0202 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012812.1 200249 D 265669 CDS YP_012813.1 46906424 2797973 201150..201968 1 NC_002973.6 identified by similarity to SP:P37551; match to protein family HMM PF00156; match to protein family HMM TIGR01743; pur operon repressor 201968 purR 2797973 purR Listeria monocytogenes serotype 4b str. F2365 pur operon repressor YP_012813.1 201150 D 265669 CDS YP_012814.1 46906425 2797214 202144..202821 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0230; hypothetical protein 202821 2797214 LMOf2365_0204 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012814.1 202144 D 265669 CDS YP_012815.1 46906426 2797236 202870..203562 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 203562 2797236 LMOf2365_0205 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_012815.1 202870 D 265669 CDS YP_012816.1 46906427 2797489 203559..204767 1 NC_002973.6 identified by match to protein family HMM PF02687; ABC transporter permease 204767 2797489 LMOf2365_0206 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_012816.1 203559 D 265669 CDS YP_012817.1 46906428 2797103 205451..205759 1 NC_002973.6 stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus; regulatory protein SpoVG 205759 spoVG-1 2797103 spoVG-1 Listeria monocytogenes serotype 4b str. F2365 regulatory protein SpoVG YP_012817.1 205451 D 265669 CDS YP_012818.1 46906429 2797183 205878..206186 1 NC_002973.6 stage V sporulation protein G; essential for spore formation and a negative regulator of asymmetric septation in Bacillus; involved in methicillin-resistance, biofilm formation and capsular polysaccharide synthesis in Staphylococcus; regulatory protein SpoVG 206186 spoVG-2 2797183 spoVG-2 Listeria monocytogenes serotype 4b str. F2365 regulatory protein SpoVG YP_012818.1 205878 D 265669 CDS YP_012819.1 46906430 2797193 206573..207946 1 NC_002973.6 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 207946 glmU 2797193 glmU Listeria monocytogenes serotype 4b str. F2365 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_012819.1 206573 D 265669 CDS YP_012820.1 46906431 2797245 207997..208953 1 NC_002973.6 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 208953 prs-1 2797245 prs-1 Listeria monocytogenes serotype 4b str. F2365 ribose-phosphate pyrophosphokinase YP_012820.1 207997 D 265669 CDS YP_012821.1 46906432 2799457 complement(208997..209710) 1 NC_002973.6 identified by similarity to SP:P22262; listeriolysin regulatory protein 209710 prfA 2799457 prfA Listeria monocytogenes serotype 4b str. F2365 listeriolysin regulatory protein YP_012821.1 208997 R 265669 CDS YP_012822.1 46906433 2797751 complement(209983..210936) 1 NC_002973.6 identified by similarity to GP:887021; similarity to SP:P34024; match to protein family HMM PF00388; 1-phosphatidylinositol phosphodiesterase 210936 plcA 2797751 plcA Listeria monocytogenes serotype 4b str. F2365 1-phosphatidylinositol phosphodiesterase YP_012822.1 209983 R 265669 CDS YP_012823.1 46906434 2797098 211179..212768 1 NC_002973.6 identified by similarity to SP:P13128; match to protein family HMM PF01289; listeriolysin O 212768 hly 2797098 hly Listeria monocytogenes serotype 4b str. F2365 listeriolysin O YP_012823.1 211179 D 265669 CDS YP_012824.1 46906435 2799022 213099..214631 1 NC_002973.6 identified by similarity to SP:P34025; match to protein family HMM PF01447; match to protein family HMM PF02868; match to protein family HMM PF03413; zinc metallopeptidase 214631 mpl 2799022 mpl Listeria monocytogenes serotype 4b str. F2365 zinc metallopeptidase YP_012824.1 213099 D 265669 CDS YP_012825.1 46906436 2798121 214831..216645 1 NC_002973.6 identified by similarity to SP:P33379; match to protein family HMM PF05058; actin-assembly inducing protein 216645 actA 2798121 actA Listeria monocytogenes serotype 4b str. F2365 actin-assembly inducing protein YP_012825.1 214831 D 265669 CDS YP_012826.1 46906437 2797078 216708..217550 1 NC_002973.6 identified by similarity to SP:P09598; match to protein family HMM PF00882; phospholipase C 217550 plcB 2797078 plcB Listeria monocytogenes serotype 4b str. F2365 phospholipase C YP_012826.1 216708 D 265669 CDS YP_012827.1 46906438 2797205 217622..217945 1 NC_002973.6 identified by similarity to GP:18073184; hypothetical protein 217945 2797205 LMOf2365_0217 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012827.1 217622 D 265669 CDS YP_012828.1 46906439 2797255 218078..218539 1 NC_002973.6 lipoprotein 218539 2797255 LMOf2365_0218 Listeria monocytogenes serotype 4b str. F2365 lipoprotein YP_012828.1 218078 D 265669 CDS YP_012829.1 46906440 2798130 complement(218592..218924) 1 NC_002973.6 identified by similarity to SP:P33382; match to protein family HMM PF01906; hypothetical protein 218924 2798130 LMOf2365_0219 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012829.1 218592 R 265669 CDS YP_012830.1 46906441 2797353 complement(218991..219674) 1 NC_002973.6 identified by similarity to GP:18073204; hypothetical protein 219674 2797353 LMOf2365_0220 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012830.1 218991 R 265669 CDS YP_012831.1 46906442 2797324 complement(219743..220684) 1 NC_002973.6 Converts (S)-lactate and NAD(+) to pyruvate and NADH; L-lactate dehydrogenase 220684 ldh 2797324 ldh Listeria monocytogenes serotype 4b str. F2365 L-lactate dehydrogenase YP_012831.1 219743 R 265669 CDS YP_012832.1 46906443 2797322 220978..221601 1 NC_002973.6 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 221601 2797322 LMOf2365_0222 Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L25/general stress protein Ctc YP_012832.1 220978 D 265669 CDS YP_012833.1 46906444 2797336 221691..222275 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 222275 2797336 LMOf2365_0223 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_012833.1 221691 D 265669 CDS YP_012834.1 46906445 2797362 222382..222942 1 NC_002973.6 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 222942 pth 2797362 pth Listeria monocytogenes serotype 4b str. F2365 peptidyl-tRNA hydrolase YP_012834.1 222382 D 265669 CDS YP_012835.1 46906446 2797334 223056..226595 1 NC_002973.6 identified by similarity to SP:P37474; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM TIGR00580; match to protein family HMM TIGR01612; transcription-repair coupling factor 226595 mfd 2797334 mfd Listeria monocytogenes serotype 4b str. F2365 transcription-repair coupling factor YP_012835.1 223056 D 265669 CDS YP_012836.1 46906447 2797084 226626..228215 1 NC_002973.6 identified by match to protein family HMM PF01943; polysaccharide biosynthesis family protein 228215 2797084 LMOf2365_0226 Listeria monocytogenes serotype 4b str. F2365 polysaccharide biosynthesis family protein YP_012836.1 226626 D 265669 CDS YP_012837.1 46906448 2797326 228239..228517 1 NC_002973.6 identified by similarity to SP:P37557; match to protein family HMM PF01479; S4 domain-containing protein 228517 2797326 LMOf2365_0227 Listeria monocytogenes serotype 4b str. F2365 S4 domain-containing protein YP_012837.1 228239 D 265669 CDS YP_012838.1 46906449 2797364 228746..229132 1 NC_002973.6 identified by similarity to SP:P37471; match to protein family HMM PF04977; cell division protein DivIC 229132 2797364 LMOf2365_0228 Listeria monocytogenes serotype 4b str. F2365 cell division protein DivIC YP_012838.1 228746 D 265669 CDS YP_012839.1 46906450 2797347 229283..229711 1 NC_002973.6 identified by match to protein family HMM PF00575; hypothetical protein 229711 2797347 LMOf2365_0229 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012839.1 229283 D 265669 CDS YP_012840.1 46906451 2797333 229818..231764 1 NC_002973.6 identified by similarity to GP:467456; match to protein family HMM PF00156; match to protein family HMM PF01171; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase, fusion 231764 2797333 LMOf2365_0230 Listeria monocytogenes serotype 4b str. F2365 hypoxanthine phosphoribosyltransferase, fusion YP_012840.1 229818 D 265669 CDS YP_012841.1 46906452 2797331 232111..234186 1 NC_002973.6 identified by similarity to SP:P37476; match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM TIGR01241; ATP-dependent metalloprotease FtsH 234186 ftsH 2797331 ftsH Listeria monocytogenes serotype 4b str. F2365 ATP-dependent metalloprotease FtsH YP_012841.1 232111 D 265669 CDS YP_012842.1 46906453 2797344 234302..235081 1 NC_002973.6 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 235081 2797344 LMOf2365_0232 Listeria monocytogenes serotype 4b str. F2365 pantothenate kinase YP_012842.1 234302 D 265669 CDS YP_012843.1 46906454 2797348 235097..235981 1 NC_002973.6 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 235981 hslO 2797348 hslO Listeria monocytogenes serotype 4b str. F2365 Hsp33-like chaperonin YP_012843.1 235097 D 265669 CDS YP_012844.1 46906455 2797566 236097..237023 1 NC_002973.6 identified by similarity to SP:P37887; match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; cysteine synthase A 237023 cysK 2797566 cysK Listeria monocytogenes serotype 4b str. F2365 cysteine synthase A YP_012844.1 236097 D 265669 CDS YP_012845.1 46906456 2797068 237468..237602 1 NC_002973.6 hypothetical protein 237602 2797068 LMOf2365_0235 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012845.1 237468 D 265669 CDS YP_012846.1 46906457 2797093 237674..238741 1 NC_002973.6 identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase 238741 folP 2797093 folP Listeria monocytogenes serotype 4b str. F2365 dihydropteroate synthase YP_012846.1 237674 D 265669 CDS YP_012847.1 46906458 2797355 238755..239129 1 NC_002973.6 identified by match to protein family HMM PF02152; match to protein family HMM TIGR00525; match to protein family HMM TIGR00526; dihydroneopterin aldolase 239129 folB 2797355 folB Listeria monocytogenes serotype 4b str. F2365 dihydroneopterin aldolase YP_012847.1 238755 D 265669 CDS YP_012848.1 46906459 2797350 239122..239601 1 NC_002973.6 identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 239601 folK 2797350 folK Listeria monocytogenes serotype 4b str. F2365 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_012848.1 239122 D 265669 CDS YP_012849.2 85700164 2798139 239677..240672 1 NC_002973.6 identified by match to protein family HMM PF01207; match to protein family HMM TIGR00737; dihydrouridine synthase 240672 2798139 LMOf2365_0239 Listeria monocytogenes serotype 4b str. F2365 dihydrouridine synthase YP_012849.2 239677 D 265669 CDS YP_012850.1 46906461 2797289 240787..242283 1 NC_002973.6 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 242283 lysS 2797289 lysS Listeria monocytogenes serotype 4b str. F2365 lysyl-tRNA synthetase YP_012850.1 240787 D 265669 CDS YP_012851.1 46906462 2799165 253816..254274 1 NC_002973.6 identified by similarity to SP:P37568; match to protein family HMM PF05848; CtsR family transcriptional regulator 254274 ctsR 2799165 ctsR Listeria monocytogenes serotype 4b str. F2365 CtsR family transcriptional regulator YP_012851.1 253816 D 265669 CDS YP_012852.1 46906463 2798159 254287..254805 1 NC_002973.6 identified by match to protein family HMM PF02151; UVR domain-containing protein 254805 2798159 LMOf2365_0242 Listeria monocytogenes serotype 4b str. F2365 UVR domain-containing protein YP_012852.1 254287 D 265669 CDS YP_012853.1 46906464 2797607 254802..255824 1 NC_002973.6 identified by similarity to SP:P37570; match to protein family HMM PF00217; ATP:guanido phosphotransferase 255824 2797607 LMOf2365_0243 Listeria monocytogenes serotype 4b str. F2365 ATP:guanido phosphotransferase YP_012853.1 254802 D 265669 CDS YP_012854.1 46906465 2799882 255853..258315 1 NC_002973.6 identified by similarity to GP:1314297; match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; ClpC ATPase 258315 2799882 LMOf2365_0244 Listeria monocytogenes serotype 4b str. F2365 ClpC ATPase YP_012854.1 255853 D 265669 CDS YP_012855.1 46906466 2797619 258462..259835 1 NC_002973.6 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 259835 radA 2797619 radA Listeria monocytogenes serotype 4b str. F2365 DNA repair protein RadA YP_012855.1 258462 D 265669 CDS YP_012856.1 46906467 2798225 259968..261041 1 NC_002973.6 identified by match to protein family HMM PF01850; match to protein family HMM PF01938; PIN/TRAM domain-containing protein 261041 2798225 LMOf2365_0246 Listeria monocytogenes serotype 4b str. F2365 PIN/TRAM domain-containing protein YP_012856.1 259968 D 265669 CDS YP_012857.1 46906468 2797930 261061..261759 1 NC_002973.6 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 261759 ispD 2797930 ispD Listeria monocytogenes serotype 4b str. F2365 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_012857.1 261061 D 265669 CDS YP_012858.1 46906469 2799439 261752..262225 1 NC_002973.6 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 262225 ispF 2799439 ispF Listeria monocytogenes serotype 4b str. F2365 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_012858.1 261752 D 265669 CDS YP_012859.1 46906470 2798244 262244..263719 1 NC_002973.6 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 263719 gltX 2798244 gltX Listeria monocytogenes serotype 4b str. F2365 glutamyl-tRNA synthetase YP_012859.1 262244 D 265669 CDS YP_012860.1 46906471 2799441 264118..264732 1 NC_002973.6 identified by similarity to SP:Q06750; match to protein family HMM PF00132; match to protein family HMM TIGR01172; serine O-acetyltransferase 264732 cysE 2799441 cysE Listeria monocytogenes serotype 4b str. F2365 serine O-acetyltransferase YP_012860.1 264118 D 265669 CDS YP_012861.1 46906472 2799423 264739..266154 1 NC_002973.6 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 266154 cysS 2799423 cysS Listeria monocytogenes serotype 4b str. F2365 cysteinyl-tRNA synthetase YP_012861.1 264739 D 265669 CDS YP_012862.1 46906473 2799011 266158..266583 1 NC_002973.6 identified by similarity to OMNI:NTL01BS00095; match to protein family HMM PF05948; hypothetical protein 266583 2799011 LMOf2365_0252 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012862.1 266158 D 265669 CDS YP_012863.1 46906474 2798253 266567..267322 1 NC_002973.6 identified by match to protein family HMM PF00588; match to protein family HMM TIGR00186; RNA methyltransferase 267322 2798253 LMOf2365_0253 Listeria monocytogenes serotype 4b str. F2365 RNA methyltransferase YP_012863.1 266567 D 265669 CDS YP_012864.1 46906475 2799894 267325..267837 1 NC_002973.6 identified by match to protein family HMM PF05991; hypothetical protein 267837 2799894 LMOf2365_0254 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012864.1 267325 D 265669 CDS YP_012865.1 46906476 2799907 267918..268523 1 NC_002973.6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 268523 sigH 2799907 sigH Listeria monocytogenes serotype 4b str. F2365 RNA polymerase factor sigma-70 YP_012865.1 267918 D 265669 CDS YP_012866.1 46906477 2799133 268627..268776 1 NC_002973.6 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group have the CXXC motif; 50S ribosomal protein L33 268776 rpmG 2799133 rpmG Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L33 YP_012866.1 268627 D 265669 CDS YP_012867.1 46906478 2798820 268796..268975 1 NC_002973.6 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 268975 secE 2798820 secE Listeria monocytogenes serotype 4b str. F2365 preprotein translocase subunit SecE YP_012867.1 268796 D 265669 CDS YP_012868.1 46906479 2798947 269105..269638 1 NC_002973.6 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 269638 nusG 2798947 nusG Listeria monocytogenes serotype 4b str. F2365 transcription antitermination protein NusG YP_012868.1 269105 D 265669 CDS YP_012869.1 46906480 2799621 269693..270163 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0277; hypothetical protein 270163 2799621 LMOf2365_0259 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012869.1 269693 D 265669 CDS YP_012870.1 46906481 2797383 270290..270715 1 NC_002973.6 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 270715 rplK 2797383 rplK Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L11 YP_012870.1 270290 D 265669 CDS YP_012871.1 46906482 2798885 270755..271444 1 NC_002973.6 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 271444 rplA 2798885 rplA Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L1 YP_012871.1 270755 D 265669 CDS YP_012872.1 46906483 2797017 271692..272192 1 NC_002973.6 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 272192 rplJ 2797017 rplJ Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L10 YP_012872.1 271692 D 265669 CDS YP_012873.1 46906484 2797434 272271..272633 1 NC_002973.6 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 272633 rplL 2797434 rplL Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L7/L12 YP_012873.1 272271 D 265669 CDS YP_012874.1 46906485 2797036 272767..273381 1 NC_002973.6 identified by similarity to GP:16412713; match to protein family HMM PF05175; hypothetical protein 273381 2797036 LMOf2365_0264 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012874.1 272767 D 265669 CDS YP_012875.1 46906486 2797203 273728..274906 1 NC_002973.6 identified by similarity to GP:4678913; match to protein family HMM PF01139; hypothetical protein 274906 2797203 LMOf2365_0265 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012875.1 273728 D 265669 CDS YP_012876.1 46906487 2799754 275051..276046 1 NC_002973.6 identified by similarity to SP:P37947; match to protein family HMM PF00532; DegA family transcriptional regulator 276046 2799754 LMOf2365_0266 Listeria monocytogenes serotype 4b str. F2365 DegA family transcriptional regulator YP_012876.1 275051 D 265669 CDS YP_012877.1 46906488 2799129 276184..277410 1 NC_002973.6 identified by similarity to SP:P29850; match to protein family HMM PF01547; sugar ABC transporter substrate-binding protein 277410 2799129 LMOf2365_0267 Listeria monocytogenes serotype 4b str. F2365 sugar ABC transporter substrate-binding protein YP_012877.1 276184 D 265669 CDS YP_012878.1 46906489 2798215 277428..278765 1 NC_002973.6 identified by similarity to SP:Q04698; match to protein family HMM PF00528; sugar ABC transporter permease 278765 2798215 LMOf2365_0268 Listeria monocytogenes serotype 4b str. F2365 sugar ABC transporter permease YP_012878.1 277428 D 265669 CDS YP_012879.1 46906490 2797392 278767..279597 1 NC_002973.6 identified by similarity to SP:Q04699; match to protein family HMM PF00528; sugar ABC transporter permease 279597 2797392 LMOf2365_0269 Listeria monocytogenes serotype 4b str. F2365 sugar ABC transporter permease YP_012879.1 278767 D 265669 CDS YP_012880.1 46906491 2798238 279612..281309 1 NC_002973.6 identified by similarity to SP:P21332; match to protein family HMM PF00128; oligo-1,6-glucosidase 281309 malL-2 2798238 malL-2 Listeria monocytogenes serotype 4b str. F2365 oligo-1,6-glucosidase YP_012880.1 279612 D 265669 CDS YP_012881.1 46906492 2798252 281310..282752 1 NC_002973.6 identified by similarity to SP:P10249; match to protein family HMM PF00128; sucrose phosphorylase 282752 gtfA 2798252 gtfA Listeria monocytogenes serotype 4b str. F2365 sucrose phosphorylase YP_012881.1 281310 D 265669 CDS YP_012882.1 46906493 2799565 282818..283063 1 NC_002973.6 hypothetical protein 283063 2799565 LMOf2365_0272 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012882.1 282818 D 265669 CDS YP_012883.1 46906494 2798976 283072..283176 1 NC_002973.6 hypothetical protein 283176 2798976 LMOf2365_0273 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012883.1 283072 D 265669 CDS YP_012884.1 46906495 2797373 283309..286863 1 NC_002973.6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 286863 rpoB 2797373 rpoB Listeria monocytogenes serotype 4b str. F2365 DNA-directed RNA polymerase subunit beta YP_012884.1 283309 D 265669 CDS YP_012885.1 46906496 2799446 287034..290639 1 NC_002973.6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 290639 rpoC 2799446 rpoC Listeria monocytogenes serotype 4b str. F2365 DNA-directed RNA polymerase subunit beta' YP_012885.1 287034 D 265669 CDS YP_012886.1 46906497 2797422 290739..291260 1 NC_002973.6 hypothetical protein 291260 2797422 LMOf2365_0276 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012886.1 290739 D 265669 CDS YP_012887.1 46906498 2799388 291326..292786 1 NC_002973.6 identified by match to protein family HMM PF00232; glycosyl hydrolase 292786 2799388 LMOf2365_0277 Listeria monocytogenes serotype 4b str. F2365 glycosyl hydrolase YP_012887.1 291326 D 265669 CDS YP_012888.1 46906499 2798248 293001..293444 1 NC_002973.6 hypothetical protein 293444 2798248 LMOf2365_0278 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012888.1 293001 D 265669 CDS YP_012889.1 46906500 2799736 293496..295157 1 NC_002973.6 identified by similarity to SP:P15361; match to protein family HMM PF00005; ABC transporter ATP-binding protein 295157 2799736 LMOf2365_0279 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_012889.1 293496 D 265669 CDS YP_012890.1 46906501 2797054 295154..296929 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein/permease 296929 2797054 LMOf2365_0280 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein/permease YP_012890.1 295154 D 265669 CDS YP_012891.1 46906502 2799149 297720..299366 1 NC_002973.6 identified by similarity to GP:2347104; match to protein family HMM PF00560; internalin C2 299366 inlC2 2799149 inlC2 Listeria monocytogenes serotype 4b str. F2365 internalin C2 YP_012891.1 297720 D 265669 CDS YP_012892.1 46906503 2799473 299575..301281 1 NC_002973.6 identified by similarity to GP:2347105; match to protein family HMM PF00560; internalin D 301281 inlD 2799473 inlD Listeria monocytogenes serotype 4b str. F2365 internalin D YP_012892.1 299575 D 265669 CDS YP_012893.1 46906504 2799899 301493..302992 1 NC_002973.6 identified by similarity to GP:2347106; match to protein family HMM PF00560; match to protein family HMM TIGR01167; internalin E 302992 inlE 2799899 inlE Listeria monocytogenes serotype 4b str. F2365 internalin E YP_012893.1 301493 D 265669 CDS YP_012894.2 161611353 2799468 303126..304265 1 NC_002973.6 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 304265 2799468 LMOf2365_0284 Listeria monocytogenes serotype 4b str. F2365 succinyl-diaminopimelate desuccinylase YP_012894.2 303126 D 265669 CDS YP_012895.1 46906506 2799431 304412..304828 1 NC_002973.6 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 304828 2799431 LMOf2365_0285 Listeria monocytogenes serotype 4b str. F2365 MarR family transcriptional regulator YP_012895.1 304412 D 265669 CDS YP_012896.1 46906507 2798056 304835..305794 1 NC_002973.6 identified by match to protein family HMM PF00903; glyoxalase 305794 2798056 LMOf2365_0286 Listeria monocytogenes serotype 4b str. F2365 glyoxalase YP_012896.1 304835 D 265669 CDS YP_012897.1 46906508 2796991 305866..306501 1 NC_002973.6 identified by match to protein family HMM PF00300; phosphoglycerate mutase 306501 2796991 LMOf2365_0287 Listeria monocytogenes serotype 4b str. F2365 phosphoglycerate mutase YP_012897.1 305866 D 265669 CDS YP_012898.1 46906509 2797381 306585..308471 1 NC_002973.6 identified by similarity to SP:P37315; match to protein family HMM PF00528; transporter 308471 2797381 LMOf2365_0288 Listeria monocytogenes serotype 4b str. F2365 transporter YP_012898.1 306585 D 265669 CDS YP_012899.1 46906510 2798892 complement(308500..309585) 1 NC_002973.6 identified by match to protein family HMM PF00560; hypothetical protein 309585 2798892 LMOf2365_0289 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012899.1 308500 R 265669 CDS YP_012900.1 46906511 2799407 complement(309719..310345) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0294; hypothetical protein 310345 2799407 LMOf2365_0290 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012900.1 309719 R 265669 CDS YP_012901.1 46906512 2797368 complement(310346..311782) 1 NC_002973.6 identified by match to protein family HMM PF00232; glycosyl hydrolase 311782 2797368 LMOf2365_0291 Listeria monocytogenes serotype 4b str. F2365 glycosyl hydrolase YP_012901.1 310346 R 265669 CDS YP_012902.1 46906513 2797777 complement(311902..312714) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0194; match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD superfamily hydrolase 312714 2797777 LMOf2365_0292 Listeria monocytogenes serotype 4b str. F2365 HAD superfamily hydrolase YP_012902.1 311902 R 265669 CDS YP_012903.1 46906514 2797702 312850..313353 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 313353 2797702 LMOf2365_0293 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_012903.1 312850 D 265669 CDS YP_012904.1 46906515 2797672 complement(313390..314052) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0298; hypothetical protein 314052 2797672 LMOf2365_0294 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012904.1 313390 R 265669 CDS YP_012905.1 46906516 2797885 complement(314310..315152) 1 NC_002973.6 identified by similarity to SP:P39695; match to protein family HMM PF00753; competence protein ComEC/Rec2-like protein 315152 2797885 LMOf2365_0295 Listeria monocytogenes serotype 4b str. F2365 competence protein ComEC/Rec2-like protein YP_012905.1 314310 R 265669 CDS YP_012906.1 46906517 2797904 complement(315169..315990) 1 NC_002973.6 identified by similarity to GP:16412731; match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD superfamily hydrolase 315990 2797904 LMOf2365_0296 Listeria monocytogenes serotype 4b str. F2365 HAD superfamily hydrolase YP_012906.1 315169 R 265669 CDS YP_012907.1 46906518 2797006 316106..317077 1 NC_002973.6 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; Gfo/Idh/MocA family oxidoreductase 317077 2797006 LMOf2365_0297 Listeria monocytogenes serotype 4b str. F2365 Gfo/Idh/MocA family oxidoreductase YP_012907.1 316106 D 265669 CDS YP_012908.1 46906519 2797677 complement(317115..318215) 1 NC_002973.6 identified by similarity to SP:Q00752; match to protein family HMM PF00005; match to protein family HMM PF03459; sugar ABC transporter ATP-binding protein 318215 2797677 LMOf2365_0298 Listeria monocytogenes serotype 4b str. F2365 sugar ABC transporter ATP-binding protein YP_012908.1 317115 R 265669 CDS YP_012909.1 46906520 2797895 318506..320656 1 NC_002973.6 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 320656 nrdD 2797895 nrdD Listeria monocytogenes serotype 4b str. F2365 anaerobic ribonucleoside triphosphate reductase YP_012909.1 318506 D 265669 CDS YP_012910.1 46906521 2797869 320649..321200 1 NC_002973.6 identified by similarity to GP:4098082; anaerobic ribonucleoside-triphosphate reductase activating protein 321200 nrdG 2797869 nrdG Listeria monocytogenes serotype 4b str. F2365 anaerobic ribonucleoside-triphosphate reductase activating protein YP_012910.1 320649 D 265669 CDS YP_012911.1 46906522 2797691 complement(321344..322015) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0307; hypothetical protein 322015 2797691 LMOf2365_0301 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012911.1 321344 R 265669 CDS YP_012912.1 46906523 2799440 complement(322180..322959) 1 NC_002973.6 identified by match to protein family HMM PF00795; carbon-nitrogen family hydrolase 322959 2799440 LMOf2365_0302 Listeria monocytogenes serotype 4b str. F2365 carbon-nitrogen family hydrolase YP_012912.1 322180 R 265669 CDS YP_012913.1 46906524 2798143 complement(323049..323711) 1 NC_002973.6 identified by match to protein family HMM PF00528; ABC transporter permease 323711 2798143 LMOf2365_0303 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_012913.1 323049 R 265669 CDS YP_012914.1 46906525 2797044 complement(323708..324724) 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 324724 2797044 LMOf2365_0304 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_012914.1 323708 R 265669 CDS YP_012915.1 46906526 2798921 complement(324739..325560) 1 NC_002973.6 identified by match to protein family HMM PF03180; match to protein family HMM TIGR00363; ABC transporter substrate-binding protein 325560 2798921 LMOf2365_0305 Listeria monocytogenes serotype 4b str. F2365 ABC transporter substrate-binding protein YP_012915.1 324739 R 265669 CDS YP_012916.1 46906527 2799012 325941..327122 1 NC_002973.6 produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however; transaminase 327122 2799012 LMOf2365_0306 Listeria monocytogenes serotype 4b str. F2365 transaminase YP_012916.1 325941 D 265669 CDS YP_012917.1 46906528 2799426 327335..328048 1 NC_002973.6 identified by similarity to SP:P13792; match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 328048 2799426 LMOf2365_0307 Listeria monocytogenes serotype 4b str. F2365 DNA-binding response regulator YP_012917.1 327335 D 265669 CDS YP_012918.1 46906529 2797578 328233..330065 1 NC_002973.6 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory box histidine kinase 330065 2797578 LMOf2365_0308 Listeria monocytogenes serotype 4b str. F2365 sensory box histidine kinase YP_012918.1 328233 D 265669 CDS YP_012919.1 46906530 2799231 330062..331384 1 NC_002973.6 identified by similarity to OMNI:NTL01SA0021; hypothetical protein 331384 2799231 LMOf2365_0309 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012919.1 330062 D 265669 CDS YP_012920.1 46906531 2798285 331387..332226 1 NC_002973.6 identified by similarity to OMNI:NTL01BH4030; hypothetical protein 332226 2798285 LMOf2365_0310 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012920.1 331387 D 265669 CDS YP_012921.1 46906532 2799330 332347..333177 1 NC_002973.6 identified by match to protein family HMM PF00753; metallo-beta-lactamase 333177 2799330 LMOf2365_0311 Listeria monocytogenes serotype 4b str. F2365 metallo-beta-lactamase YP_012921.1 332347 D 265669 CDS YP_012922.1 46906533 2799089 333275..334777 1 NC_002973.6 identified by similarity to SP:Q9LA06; match to protein family HMM PF00089; match to protein family HMM PF00595; serine protease 334777 2799089 LMOf2365_0312 Listeria monocytogenes serotype 4b str. F2365 serine protease YP_012922.1 333275 D 265669 CDS YP_012923.1 46906534 2799171 335107..335202 1 NC_002973.6 hypothetical protein 335202 2799171 LMOf2365_0313 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012923.1 335107 D 265669 CDS YP_012924.1 46906535 2799711 335465..335944 1 NC_002973.6 SPOUT methyltransferase; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 335944 2799711 LMOf2365_0314 Listeria monocytogenes serotype 4b str. F2365 rRNA large subunit methyltransferase YP_012924.1 335465 D 265669 CDS YP_012925.1 46906536 2799295 complement(335976..336839) 1 NC_002973.6 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 336839 2799295 LMOf2365_0315 Listeria monocytogenes serotype 4b str. F2365 LysR family transcriptional regulator YP_012925.1 335976 R 265669 CDS YP_012926.1 46906537 2799039 336958..337695 1 NC_002973.6 identified by match to protein family HMM PF00881; nitroreductase 337695 2799039 LMOf2365_0316 Listeria monocytogenes serotype 4b str. F2365 nitroreductase YP_012926.1 336958 D 265669 CDS YP_012927.1 46906538 2799248 337906..338544 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0322; hypothetical protein 338544 2799248 LMOf2365_0317 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012927.1 337906 D 265669 CDS YP_012928.1 46906539 2799026 complement(338549..340420) 1 NC_002973.6 identified by match to protein family HMM PF00359; match to protein family HMM PF00874; PRD/PTS system IIA 2 domain-containing protein 340420 2799026 LMOf2365_0318 Listeria monocytogenes serotype 4b str. F2365 PRD/PTS system IIA 2 domain-containing protein YP_012928.1 338549 R 265669 CDS YP_012929.1 46906540 2799034 complement(340519..341832) 1 NC_002973.6 identified by match to protein family HMM PF02378; match to protein family HMM TIGR00410; PTS system transporter subunit IIC 341832 2799034 LMOf2365_0319 Listeria monocytogenes serotype 4b str. F2365 PTS system transporter subunit IIC YP_012929.1 340519 R 265669 CDS YP_012930.1 46906541 2799292 complement(341837..342127) 1 NC_002973.6 identified by match to protein family HMM PF02302; PTS system cellobiose-specific transporter subunit IIB 342127 2799292 LMOf2365_0320 Listeria monocytogenes serotype 4b str. F2365 PTS system cellobiose-specific transporter subunit IIB YP_012930.1 341837 R 265669 CDS YP_012931.1 46906542 2799051 complement(342144..343535) 1 NC_002973.6 identified by match to protein family HMM PF00232; glycosyl hydrolase 343535 2799051 LMOf2365_0321 Listeria monocytogenes serotype 4b str. F2365 glycosyl hydrolase YP_012931.1 342144 R 265669 CDS YP_012932.1 46906543 2799055 complement(343528..343869) 1 NC_002973.6 identified by similarity to SP:P17335; match to protein family HMM PF02255; PTS system beta-glucoside-specific transporter subunit IIA 343869 2799055 LMOf2365_0322 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIA YP_012932.1 343528 R 265669 CDS YP_012933.1 46906544 2799045 343921..344007 1 NC_002973.6 hypothetical protein 344007 2799045 LMOf2365_0323 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012933.1 343921 D 265669 CDS YP_012934.1 46906545 2799078 complement(344509..346176) 1 NC_002973.6 identified by similarity to SP:P16667; match to protein family HMM PF02976; type II restriction enzyme Sau3AI 346176 2799078 LMOf2365_0325 Listeria monocytogenes serotype 4b str. F2365 type II restriction enzyme Sau3AI YP_012934.1 344509 R 265669 CDS YP_012935.1 46906546 2799691 346304..346510 1 NC_002973.6 identified by match to protein family HMM PF01381; DNA-binding protein 346510 2799691 LMOf2365_0326 Listeria monocytogenes serotype 4b str. F2365 DNA-binding protein YP_012935.1 346304 D 265669 CDS YP_012936.1 46906547 2799234 346513..347922 1 NC_002973.6 identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675; C-5 cytosine-specific DNA methylase 347922 2799234 LMOf2365_0327 Listeria monocytogenes serotype 4b str. F2365 C-5 cytosine-specific DNA methylase YP_012936.1 346513 D 265669 CDS YP_012937.1 46906548 2799213 348172..349026 1 NC_002973.6 hypothetical protein 349026 2799213 LMOf2365_0328 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012937.1 348172 D 265669 CDS YP_012938.1 46906549 2799181 349247..349801 1 NC_002973.6 lipoprotein 349801 2799181 LMOf2365_0329 Listeria monocytogenes serotype 4b str. F2365 lipoprotein YP_012938.1 349247 D 265669 CDS YP_012939.1 46906550 2797925 349992..351071 1 NC_002973.6 identified by similarity to SP:P75823; threonine aldolase 351071 2797925 LMOf2365_0330 Listeria monocytogenes serotype 4b str. F2365 threonine aldolase YP_012939.1 349992 D 265669 CDS YP_012940.1 46906551 2799253 351321..352241 1 NC_002973.6 identified by match to protein family HMM PF01435; M48 family peptidase 352241 2799253 LMOf2365_0331 Listeria monocytogenes serotype 4b str. F2365 M48 family peptidase YP_012940.1 351321 D 265669 CDS YP_012941.1 46906552 2799161 352266..353051 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0337; match to protein family HMM PF04794; hypothetical protein 353051 2799161 LMOf2365_0332 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012941.1 352266 D 265669 CDS YP_012942.1 46906553 2797936 353274..353948 1 NC_002973.6 identified by match to protein family HMM PF03070; TENA/THI-4 family protein 353948 2797936 LMOf2365_0333 Listeria monocytogenes serotype 4b str. F2365 TENA/THI-4 family protein YP_012942.1 353274 D 265669 CDS YP_012943.1 46906554 2799240 353953..354750 1 NC_002973.6 catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase 354750 thiM 2799240 thiM Listeria monocytogenes serotype 4b str. F2365 hydroxyethylthiazole kinase YP_012943.1 353953 D 265669 CDS YP_012944.1 46906555 2799210 354747..355550 1 NC_002973.6 identified by match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 355550 thiD-1 2799210 thiD-1 Listeria monocytogenes serotype 4b str. F2365 phosphomethylpyrimidine kinase YP_012944.1 354747 D 265669 CDS YP_012945.1 46906556 2799134 355547..356191 1 NC_002973.6 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase 356191 thiE 2799134 thiE Listeria monocytogenes serotype 4b str. F2365 thiamine-phosphate pyrophosphorylase YP_012945.1 355547 D 265669 CDS YP_012946.1 46906557 2799158 complement(356218..357633) 1 NC_002973.6 identified by similarity to SP:P40740; match to protein family HMM PF00232; beta-glucosidase 357633 bglH-1 2799158 bglH-1 Listeria monocytogenes serotype 4b str. F2365 beta-glucosidase YP_012946.1 356218 R 265669 CDS YP_012947.1 46906558 2799192 complement(357848..359116) 1 NC_002973.6 identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein 359116 2799192 LMOf2365_0338 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_012947.1 357848 R 265669 CDS YP_012948.1 46906559 2799593 359444..360103 1 NC_002973.6 identified by similarity to GP:16412775; hypothetical protein 360103 2799593 LMOf2365_0339 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012948.1 359444 D 265669 CDS YP_012949.1 46906560 2799126 360401..360793 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0345; hypothetical protein 360793 2799126 LMOf2365_0340 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012949.1 360401 D 265669 CDS YP_012950.1 46906561 2799170 complement(360828..361601) 1 NC_002973.6 identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase 361601 2799170 LMOf2365_0341 Listeria monocytogenes serotype 4b str. F2365 endonuclease/exonuclease/phosphatase YP_012950.1 360828 R 265669 CDS YP_012951.1 46906562 2799084 361756..362223 1 NC_002973.6 lipoprotein 362223 2799084 LMOf2365_0342 Listeria monocytogenes serotype 4b str. F2365 lipoprotein YP_012951.1 361756 D 265669 CDS YP_012952.1 46906563 2799612 362491..363393 1 NC_002973.6 identified by match to protein family HMM PF01381; match to protein family HMM TIGR01716; transcriptional activator 363393 2799612 LMOf2365_0343 Listeria monocytogenes serotype 4b str. F2365 transcriptional activator YP_012952.1 362491 D 265669 CDS YP_012953.1 46906564 2799321 363557..364429 1 NC_002973.6 identified by match to protein family HMM PF01381; match to protein family HMM TIGR01716; transcriptional activator 364429 2799321 LMOf2365_0344 Listeria monocytogenes serotype 4b str. F2365 transcriptional activator YP_012953.1 363557 D 265669 CDS YP_012954.1 46906565 2799060 364736..368677 1 NC_002973.6 identified by similarity to OMNI:NTL01LM2386; hypothetical protein 368677 2799060 LMOf2365_0345 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012954.1 364736 D 265669 CDS YP_012955.1 46906566 2799308 368767..369495 1 NC_002973.6 identified by similarity to GP:16412782; hypothetical protein 369495 2799308 LMOf2365_0346 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012955.1 368767 D 265669 CDS YP_012956.1 46906567 2799218 complement(369650..371506) 1 NC_002973.6 identified by match to protein family HMM PF00560; match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein 371506 2799218 LMOf2365_0347 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_012956.1 369650 R 265669 CDS YP_012957.1 46906568 2797569 372017..372169 1 NC_002973.6 hypothetical protein 372169 2797569 LMOf2365_0348 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012957.1 372017 D 265669 CDS YP_012958.1 46906569 2799311 372153..375296 1 NC_002973.6 identified by match to protein family HMM PF00560; match to protein family HMM TIGR01167; match to protein family HMM TIGR01612; cell wall surface anchor family protein 375296 2799311 LMOf2365_0349 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_012958.1 372153 D 265669 CDS YP_012959.1 46906570 2797565 375686..381013 1 NC_002973.6 identified by match to protein family HMM PF00560; match to protein family HMM TIGR01167; match to protein family HMM TIGR01612; cell wall surface anchor family protein 381013 2797565 LMOf2365_0350 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_012959.1 375686 D 265669 CDS YP_012960.1 46906571 2799028 381237..381761 1 NC_002973.6 hypothetical protein 381761 2799028 LMOf2365_0351 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012960.1 381237 D 265669 CDS YP_012961.1 46906572 2799676 381974..382258 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0353; hypothetical protein 382258 2799676 LMOf2365_0352 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012961.1 381974 D 265669 CDS YP_012962.1 46906573 2799081 382259..382627 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0354; hypothetical protein 382627 2799081 LMOf2365_0353 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012962.1 382259 D 265669 CDS YP_012963.1 46906574 2799325 382624..384060 1 NC_002973.6 hypothetical protein 384060 2799325 LMOf2365_0354 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012963.1 382624 D 265669 CDS YP_012964.1 46906575 2799018 384072..384467 1 NC_002973.6 identified by similarity to OMNI:NTL01PM0501; hypothetical protein 384467 2799018 LMOf2365_0355 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012964.1 384072 D 265669 CDS YP_012965.1 46906576 2799094 384604..384723 1 NC_002973.6 hypothetical protein 384723 2799094 LMOf2365_0356 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012965.1 384604 D 265669 CDS YP_012966.1 46906577 2799097 384828..385058 1 NC_002973.6 identified by similarity to OMNI:NTL01NM00296; hypothetical protein 385058 2799097 LMOf2365_0357 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012966.1 384828 D 265669 CDS YP_012967.1 46906578 2799257 385137..385364 1 NC_002973.6 hypothetical protein 385364 2799257 LMOf2365_0358 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012967.1 385137 D 265669 CDS YP_012968.1 46906579 2799059 385524..385793 1 NC_002973.6 hypothetical protein 385793 2799059 LMOf2365_0359 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012968.1 385524 D 265669 CDS YP_012969.1 46906580 2799086 385787..385909 1 NC_002973.6 hypothetical protein 385909 2799086 LMOf2365_0360 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012969.1 385787 D 265669 CDS YP_012970.1 46906581 2799260 386169..386357 1 NC_002973.6 identified by similarity to OMNI:EFA0076; hypothetical protein 386357 2799260 LMOf2365_0361 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012970.1 386169 D 265669 CDS YP_012971.1 46906582 2799267 complement(386477..388474) 1 NC_002973.6 identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; transketolase 388474 tkt-1 2799267 tkt-1 Listeria monocytogenes serotype 4b str. F2365 transketolase YP_012971.1 386477 R 265669 CDS YP_012972.1 46906583 2799270 complement(388476..389132) 1 NC_002973.6 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 389132 2799270 LMOf2365_0363 Listeria monocytogenes serotype 4b str. F2365 translaldolase YP_012972.1 388476 R 265669 CDS YP_012973.1 46906584 2799102 complement(389179..389943) 1 NC_002973.6 identified by match to protein family HMM PF00106; short chain dehydrogenase 389943 2799102 LMOf2365_0364 Listeria monocytogenes serotype 4b str. F2365 short chain dehydrogenase YP_012973.1 389179 R 265669 CDS YP_012974.1 46906585 2799299 complement(389968..390414) 1 NC_002973.6 identified by similarity to SP:P37351; match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01120; ribose 5-phosphate isomerase B 390414 rpiB-1 2799299 rpiB-1 Listeria monocytogenes serotype 4b str. F2365 ribose 5-phosphate isomerase B YP_012974.1 389968 R 265669 CDS YP_012975.1 46906586 2799316 complement(390421..391185) 1 NC_002973.6 identified by match to protein family HMM PF00121; triosephosphate isomerase 391185 tpiA-1 2799316 tpiA-1 Listeria monocytogenes serotype 4b str. F2365 triosephosphate isomerase YP_012975.1 390421 R 265669 CDS YP_012976.1 46906587 2799305 complement(391189..391839) 1 NC_002973.6 identified by similarity to GP:15082276; match to protein family HMM PF02734; dihydroxyacetone kinase 391839 2799305 LMOf2365_0367 Listeria monocytogenes serotype 4b str. F2365 dihydroxyacetone kinase YP_012976.1 391189 R 265669 CDS YP_012977.1 46906588 2799284 complement(391861..392856) 1 NC_002973.6 identified by similarity to GP:15082277; match to protein family HMM PF02733; dihydroxyacetone kinase 392856 2799284 LMOf2365_0368 Listeria monocytogenes serotype 4b str. F2365 dihydroxyacetone kinase YP_012977.1 391861 R 265669 CDS YP_012978.1 46906589 2799017 complement(392878..393219) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0365; hypothetical protein 393219 2799017 LMOf2365_0369 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012978.1 392878 R 265669 CDS YP_012979.1 46906590 2799280 complement(393235..393666) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0366; hypothetical protein 393666 2799280 LMOf2365_0370 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012979.1 393235 R 265669 CDS YP_012980.1 46906591 2799602 complement(393751..394128) 1 NC_002973.6 identified by match to protein family HMM PF03610; PTS system mannnose-specific transporter subunit IIA 394128 2799602 LMOf2365_0371 Listeria monocytogenes serotype 4b str. F2365 PTS system mannnose-specific transporter subunit IIA YP_012980.1 393751 R 265669 CDS YP_012981.1 46906592 2798192 394311..395075 1 NC_002973.6 identified by match to protein family HMM PF00455; DeoR family transcriptional regulator 395075 2798192 LMOf2365_0372 Listeria monocytogenes serotype 4b str. F2365 DeoR family transcriptional regulator YP_012981.1 394311 D 265669 CDS YP_012982.1 46906593 2799143 395141..395551 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 395551 2799143 LMOf2365_0373 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_012982.1 395141 D 265669 CDS YP_012983.1 46906594 2797573 395649..397418 1 NC_002973.6 identified by similarity to GP:2347104; match to protein family HMM PF00560; internalin 397418 2797573 LMOf2365_0374 Listeria monocytogenes serotype 4b str. F2365 internalin YP_012983.1 395649 D 265669 CDS YP_012984.1 46906595 2797649 complement(397459..398985) 1 NC_002973.6 identified by similarity to GP:12723568; match to protein family HMM PF00501; long-chain acyl-CoA synthetase 398985 2797649 LMOf2365_0375 Listeria monocytogenes serotype 4b str. F2365 long-chain acyl-CoA synthetase YP_012984.1 397459 R 265669 CDS YP_012985.1 46906596 2799235 399222..400742 1 NC_002973.6 Reduces fumarate to succinate in anaerobic bacterial respiration; fumarate reductase flavoprotein subunit 400742 2799235 LMOf2365_0376 Listeria monocytogenes serotype 4b str. F2365 fumarate reductase flavoprotein subunit YP_012985.1 399222 D 265669 CDS YP_012986.1 46906597 2799183 400946..401962 1 NC_002973.6 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; YhhX family oxidoreductase 401962 2799183 LMOf2365_0377 Listeria monocytogenes serotype 4b str. F2365 YhhX family oxidoreductase YP_012986.1 400946 D 265669 CDS YP_012987.1 46906598 2797198 404018..404878 1 NC_002973.6 identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; hypothetical protein 404878 2797198 LMOf2365_0379 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012987.1 404018 D 265669 CDS YP_012988.1 46906599 2799132 404935..405705 1 NC_002973.6 identified by match to protein family HMM PF00455; DeoR family transcriptional regulator 405705 2799132 LMOf2365_0380 Listeria monocytogenes serotype 4b str. F2365 DeoR family transcriptional regulator YP_012988.1 404935 D 265669 CDS YP_012989.1 46906600 2797945 complement(405689..405916) 1 NC_002973.6 hypothetical protein 405916 2797945 LMOf2365_0381 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012989.1 405689 R 265669 CDS YP_012990.1 46906601 2799274 complement(406017..406634) 1 NC_002973.6 identified by match to protein family HMM PF03575; S51 family peptidase 406634 2799274 LMOf2365_0382 Listeria monocytogenes serotype 4b str. F2365 S51 family peptidase YP_012990.1 406017 R 265669 CDS YP_012991.1 46906602 2799110 406729..407676 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0381; hypothetical protein 407676 2799110 LMOf2365_0383 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012991.1 406729 D 265669 CDS YP_012992.1 46906603 2799071 407726..408235 1 NC_002973.6 identified by match to protein family HMM PF00293; MutT/nudix family protein 408235 2799071 LMOf2365_0384 Listeria monocytogenes serotype 4b str. F2365 MutT/nudix family protein YP_012992.1 407726 D 265669 CDS YP_012993.1 46906604 2797949 408331..409050 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0386; match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein 409050 2797949 LMOf2365_0385 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012993.1 408331 D 265669 CDS YP_012994.1 46906605 2798985 409087..409422 1 NC_002973.6 identified by match to protein family HMM PF03831; match to protein family HMM TIGR00686; alkylphosphonate utilization operon protein PhnA 409422 phnA 2798985 phnA Listeria monocytogenes serotype 4b str. F2365 alkylphosphonate utilization operon protein PhnA YP_012994.1 409087 D 265669 CDS YP_012995.1 46906606 2798922 complement(409462..410175) 1 NC_002973.6 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 410175 2798922 LMOf2365_0387 Listeria monocytogenes serotype 4b str. F2365 GntR family transcriptional regulator YP_012995.1 409462 R 265669 CDS YP_012996.1 46906607 2798298 410332..411774 1 NC_002973.6 identified by match to protein family HMM PF00232; glycosyl hydrolase 411774 2798298 LMOf2365_0388 Listeria monocytogenes serotype 4b str. F2365 glycosyl hydrolase YP_012996.1 410332 D 265669 CDS YP_012997.1 46906608 2799389 411767..413101 1 NC_002973.6 identified by match to protein family HMM PF02378; match to protein family HMM TIGR00410; PTS system beta-glucoside-specific transporter subunit IIC 413101 2799389 LMOf2365_0389 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIC YP_012997.1 411767 D 265669 CDS YP_012998.1 46906609 2797622 413119..413421 1 NC_002973.6 identified by similarity to SP:P46318; match to protein family HMM PF02302; PTS system beta-glucoside-specific transporter subunit IIB 413421 2797622 LMOf2365_0390 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIB YP_012998.1 413119 D 265669 CDS YP_012999.1 46906610 2797008 413508..413702 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0392; hypothetical protein 413702 2797008 LMOf2365_0391 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_012999.1 413508 D 265669 CDS YP_013000.1 46906611 2797024 complement(413741..414661) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0393; hypothetical protein 414661 2797024 LMOf2365_0392 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013000.1 413741 R 265669 CDS YP_013001.1 46906612 2797397 414764..415183 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0394; hypothetical protein 415183 2797397 LMOf2365_0393 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013001.1 414764 D 265669 CDS YP_013002.1 46906613 2799452 complement(415232..415993) 1 NC_002973.6 identified by match to protein family HMM PF00455; DeoR family transcriptional regulator 415993 2799452 LMOf2365_0394 Listeria monocytogenes serotype 4b str. F2365 DeoR family transcriptional regulator YP_013002.1 415232 R 265669 CDS YP_013003.1 46906614 2798068 416188..417654 1 NC_002973.6 identified by similarity to SP:P42412; match to protein family HMM PF00171; match to protein family HMM TIGR01722; methylmalonate-semialdehyde dehydrogenase 417654 mmsA 2798068 mmsA Listeria monocytogenes serotype 4b str. F2365 methylmalonate-semialdehyde dehydrogenase YP_013003.1 416188 D 265669 CDS YP_013004.1 46906615 2797043 417667..418488 1 NC_002973.6 identified by similarity to SP:P42413; IolB protein 418488 2797043 LMOf2365_0396 Listeria monocytogenes serotype 4b str. F2365 IolB protein YP_013004.1 417667 D 265669 CDS YP_013005.1 46906616 2799403 418505..419482 1 NC_002973.6 identified by similarity to SP:P42414; match to protein family HMM PF00294; IolC protein 419482 2799403 LMOf2365_0397 Listeria monocytogenes serotype 4b str. F2365 IolC protein YP_013005.1 418505 D 265669 CDS YP_013006.1 46906617 2798148 419492..421411 1 NC_002973.6 identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; thiamine-pyrophosphate-requiring enzyme 421411 2798148 LMOf2365_0398 Listeria monocytogenes serotype 4b str. F2365 thiamine-pyrophosphate-requiring enzyme YP_013006.1 419492 D 265669 CDS YP_013007.1 46906618 2798914 421544..421915 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0403; hypothetical protein 421915 2798914 LMOf2365_0399 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013007.1 421544 D 265669 CDS YP_013008.1 46906619 2797026 422009..422377 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0404; hypothetical protein 422377 2797026 LMOf2365_0400 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013008.1 422009 D 265669 CDS YP_013009.1 46906620 2798497 complement(422401..423516) 1 NC_002973.6 hypothetical protein 423516 2798497 LMOf2365_0401 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013009.1 422401 R 265669 CDS YP_013010.1 46906621 2798412 423647..424312 1 NC_002973.6 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 424312 ung-1 2798412 ung-1 Listeria monocytogenes serotype 4b str. F2365 uracil-DNA glycosylase YP_013010.1 423647 D 265669 CDS YP_013011.1 46906622 2798329 424480..424779 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0407; hypothetical protein 424779 2798329 LMOf2365_0403 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013011.1 424480 D 265669 CDS YP_013012.1 46906623 2798763 424776..425720 1 NC_002973.6 identified by similarity to OMNI:NTL01SA1454; hypothetical protein 425720 2798763 LMOf2365_0404 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013012.1 424776 D 265669 CDS YP_013013.1 46906624 2798726 425755..426204 1 NC_002973.6 identified by similarity to GP:16412840; hypothetical protein 426204 2798726 LMOf2365_0405 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013013.1 425755 D 265669 CDS YP_013014.1 46906625 2799116 426315..427031 1 NC_002973.6 identified by match to protein family HMM PF00877; NLP/P60 family protein 427031 2799116 LMOf2365_0406 Listeria monocytogenes serotype 4b str. F2365 NLP/P60 family protein YP_013014.1 426315 D 265669 CDS YP_013015.1 46906626 2797050 427087..427512 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 427512 2797050 LMOf2365_0407 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_013015.1 427087 D 265669 CDS YP_013016.1 46906627 2797090 complement(427515..428315) 1 NC_002973.6 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 428315 proC 2797090 proC Listeria monocytogenes serotype 4b str. F2365 pyrroline-5-carboxylate reductase YP_013016.1 427515 R 265669 CDS YP_013017.1 46906628 2797086 428664..428876 1 NC_002973.6 hypothetical protein 428876 2797086 LMOf2365_0409 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013017.1 428664 D 265669 CDS YP_013018.1 46906629 2797129 428922..429023 1 NC_002973.6 hypothetical protein 429023 2797129 LMOf2365_0410 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013018.1 428922 D 265669 CDS YP_013019.1 46906630 2797162 429060..429161 1 NC_002973.6 hypothetical protein 429161 2797162 LMOf2365_0411 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013019.1 429060 D 265669 CDS YP_013020.1 46906631 2797221 429199..429300 1 NC_002973.6 hypothetical protein 429300 2797221 LMOf2365_0412 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013020.1 429199 D 265669 CDS YP_013021.1 46906632 2797258 429391..430614 1 NC_002973.6 identified by match to protein family HMM TIGR01167; cell wall surface anchor family protein 430614 2797258 LMOf2365_0413 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_013021.1 429391 D 265669 CDS YP_013022.1 46906633 2797435 430731..431381 1 NC_002973.6 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 431381 2797435 LMOf2365_0414 Listeria monocytogenes serotype 4b str. F2365 GntR family transcriptional regulator YP_013022.1 430731 D 265669 CDS YP_013023.1 46906634 2798791 431426..432025 1 NC_002973.6 hypothetical protein 432025 2798791 LMOf2365_0415 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013023.1 431426 D 265669 CDS YP_013024.1 46906635 2799730 432043..432717 1 NC_002973.6 ABC transporter ATP-binding protein 432717 2799730 LMOf2365_0416 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_013024.1 432043 D 265669 CDS YP_013025.1 46906636 2797543 432702..433880 1 NC_002973.6 identified by match to protein family HMM PF02687; ABC transporter permease 433880 2797543 LMOf2365_0417 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_013025.1 432702 D 265669 CDS YP_013026.1 46906637 2797497 433899..434042 1 NC_002973.6 hypothetical protein 434042 2797497 LMOf2365_0418 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013026.1 433899 D 265669 CDS YP_013027.1 46906638 2797522 434113..434595 1 NC_002973.6 identified by match to protein family HMM PF05146; hypothetical protein 434595 2797522 LMOf2365_0419 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013027.1 434113 D 265669 CDS YP_013028.1 46906639 2797527 436683..439316 1 NC_002973.6 identified by match to protein family HMM PF01074; alpha-mannosidase 439316 2797527 LMOf2365_0421 Listeria monocytogenes serotype 4b str. F2365 alpha-mannosidase YP_013028.1 436683 D 265669 CDS YP_013029.1 46906640 2797250 439349..441283 1 NC_002973.6 identified by match to protein family HMM PF00359; match to protein family HMM PF00874; match to protein family HMM PF02302; PRD/PTS system IIA 2 domain-containing protein 441283 2797250 LMOf2365_0422 Listeria monocytogenes serotype 4b str. F2365 PRD/PTS system IIA 2 domain-containing protein YP_013029.1 439349 D 265669 CDS YP_013030.1 46906641 2797242 441410..441826 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0424; hypothetical protein 441826 2797242 LMOf2365_0423 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013030.1 441410 D 265669 CDS YP_013031.1 46906642 2797454 441823..442215 1 NC_002973.6 hypothetical protein 442215 2797454 LMOf2365_0424 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013031.1 441823 D 265669 CDS YP_013032.1 46906643 2797229 442324..443331 1 NC_002973.6 identified by match to protein family HMM PF01384; phosphate transporter family protein 443331 2797229 LMOf2365_0425 Listeria monocytogenes serotype 4b str. F2365 phosphate transporter family protein YP_013032.1 442324 D 265669 CDS YP_013033.1 46906644 2797215 443347..443727 1 NC_002973.6 identified by match to protein family HMM PF00903; glyoxalase 443727 2797215 LMOf2365_0426 Listeria monocytogenes serotype 4b str. F2365 glyoxalase YP_013033.1 443347 D 265669 CDS YP_013034.1 46906645 2797141 443796..444188 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0428; hypothetical protein 444188 2797141 LMOf2365_0427 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013034.1 443796 D 265669 CDS YP_013035.1 46906646 2797175 444201..444623 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0429; hypothetical protein 444623 2797175 LMOf2365_0428 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013035.1 444201 D 265669 CDS YP_013036.1 46906647 2797185 444851..447322 1 NC_002973.6 identified by similarity to GP:2347102; match to protein family HMM PF00560; match to protein family HMM TIGR01167; internalin 447322 inlF 2797185 inlF Listeria monocytogenes serotype 4b str. F2365 internalin YP_013036.1 444851 D 265669 CDS YP_013037.1 46906648 2797195 complement(447370..449973) 1 NC_002973.6 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 449973 2797195 LMOf2365_0430 Listeria monocytogenes serotype 4b str. F2365 phosphoenolpyruvate synthase YP_013037.1 447370 R 265669 CDS YP_013038.1 46906649 2797136 complement(450173..451051) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0431; hypothetical protein 451051 2797136 LMOf2365_0431 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013038.1 450173 R 265669 CDS YP_013039.1 46906650 2797095 451388..451579 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0432; hypothetical protein 451579 2797095 LMOf2365_0432 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013039.1 451388 D 265669 CDS YP_013040.1 46906651 2797099 451606..452415 1 NC_002973.6 identified by match to protein family HMM PF02535; ZIP zinc transporter family protein 452415 2797099 LMOf2365_0433 Listeria monocytogenes serotype 4b str. F2365 ZIP zinc transporter family protein YP_013040.1 451606 D 265669 CDS YP_013041.1 46906652 2797104 452708..454108 1 NC_002973.6 identified by similarity to OMNI:NTL02SP1332; match to protein family HMM PF01522; polysaccharide deacetylase 454108 2797104 LMOf2365_0434 Listeria monocytogenes serotype 4b str. F2365 polysaccharide deacetylase YP_013041.1 452708 D 265669 CDS YP_013042.1 46906653 2797079 454235..454438 1 NC_002973.6 identified by match to protein family HMM PF01381; DNA-binding protein 454438 2797079 LMOf2365_0435 Listeria monocytogenes serotype 4b str. F2365 DNA-binding protein YP_013042.1 454235 D 265669 CDS YP_013043.1 46906654 2797094 454440..454850 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0436; hypothetical protein 454850 2797094 LMOf2365_0436 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013043.1 454440 D 265669 CDS YP_013044.1 46906655 2797089 complement(454903..455202) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0437; hypothetical protein 455202 2797089 LMOf2365_0437 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013044.1 454903 R 265669 CDS YP_013045.1 46906656 2797072 complement(455283..455837) 1 NC_002973.6 identified by similarity to OMNI:NTL01LL0877; hypothetical protein 455837 2797072 LMOf2365_0438 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013045.1 455283 R 265669 CDS YP_013046.1 46906657 2797074 455984..456796 1 NC_002973.6 identified by match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; cof family hydrolase 456796 2797074 LMOf2365_0439 Listeria monocytogenes serotype 4b str. F2365 cof family hydrolase YP_013046.1 455984 D 265669 CDS YP_013047.1 46906658 2797038 complement(456815..457672) 1 NC_002973.6 identified by similarity to GP:2226001; sugar transporter 457672 2797038 LMOf2365_0440 Listeria monocytogenes serotype 4b str. F2365 sugar transporter YP_013047.1 456815 R 265669 CDS YP_013048.1 46906659 2797069 457835..459796 1 NC_002973.6 identified by match to protein family HMM PF00359; match to protein family HMM PF00874; match to protein family HMM PF02302; PRD/PTS system IIA 2 domain-containing protein 459796 2797069 LMOf2365_0441 Listeria monocytogenes serotype 4b str. F2365 PRD/PTS system IIA 2 domain-containing protein YP_013048.1 457835 D 265669 CDS YP_013049.1 46906660 2797612 459796..460260 1 NC_002973.6 identified by match to protein family HMM PF00359; match to protein family HMM TIGR00848; PTS system fructose-specific transporter subunit IIA 460260 2797612 LMOf2365_0442 Listeria monocytogenes serotype 4b str. F2365 PTS system fructose-specific transporter subunit IIA YP_013049.1 459796 D 265669 CDS YP_013050.1 46906661 2798715 460257..460577 1 NC_002973.6 identified by match to protein family HMM PF02379; match to protein family HMM TIGR00829; PTS system fructose-specific transporter subunit IIB 460577 2798715 LMOf2365_0443 Listeria monocytogenes serotype 4b str. F2365 PTS system fructose-specific transporter subunit IIB YP_013050.1 460257 D 265669 CDS YP_013051.1 46906662 2797037 460590..461696 1 NC_002973.6 identified by match to protein family HMM PF02378; match to protein family HMM TIGR01427; PTS system fructose-specific transporter subunit IIC 461696 2797037 LMOf2365_0444 Listeria monocytogenes serotype 4b str. F2365 PTS system fructose-specific transporter subunit IIC YP_013051.1 460590 D 265669 CDS YP_013052.1 46906663 2798804 461712..464294 1 NC_002973.6 identified by match to protein family HMM PF01074; glycosyl hydrolase 464294 2798804 LMOf2365_0445 Listeria monocytogenes serotype 4b str. F2365 glycosyl hydrolase YP_013052.1 461712 D 265669 CDS YP_013053.1 46906664 2798819 complement(464317..465192) 1 NC_002973.6 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 465192 2798819 LMOf2365_0446 Listeria monocytogenes serotype 4b str. F2365 LysR family transcriptional regulator YP_013053.1 464317 R 265669 CDS YP_013054.1 46906665 2798691 465310..465879 1 NC_002973.6 identified by similarity to SP:Q09707; match to protein family HMM PF00132; acetyltransferase 465879 2798691 LMOf2365_0447 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_013054.1 465310 D 265669 CDS YP_013055.1 46906666 2798751 465893..466639 1 NC_002973.6 identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase oxidoreductase 466639 2798751 LMOf2365_0448 Listeria monocytogenes serotype 4b str. F2365 short chain dehydrogenase/reductase oxidoreductase YP_013055.1 465893 D 265669 CDS YP_013056.1 46906667 2798739 466835..467260 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0450; hypothetical protein 467260 2798739 LMOf2365_0449 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013056.1 466835 D 265669 CDS YP_013057.1 46906668 2798821 467516..474103 1 NC_002973.6 identified by similarity to SP:Q07833; match to protein family HMM PF05593; match to protein family HMM TIGR01612; match to protein family HMM TIGR01643; wall-associated protein 474103 2798821 LMOf2365_0450 Listeria monocytogenes serotype 4b str. F2365 wall-associated protein YP_013057.1 467516 D 265669 CDS YP_013058.1 46906669 2798595 474103..474585 1 NC_002973.6 hypothetical protein 474585 2798595 LMOf2365_0451 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013058.1 474103 D 265669 CDS YP_013059.1 46906670 2798630 474856..474969 1 NC_002973.6 hypothetical protein 474969 2798630 LMOf2365_0452 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013059.1 474856 D 265669 CDS YP_013060.1 46906671 2797827 475465..475815 1 NC_002973.6 hypothetical protein 475815 2797827 LMOf2365_0453 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013060.1 475465 D 265669 CDS YP_013061.1 46906672 2798818 475978..476568 1 NC_002973.6 identified by similarity to GP:19915967; hypothetical protein 476568 2798818 LMOf2365_0454 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013061.1 475978 D 265669 CDS YP_013062.1 46906673 2797567 476595..477041 1 NC_002973.6 hypothetical protein 477041 2797567 LMOf2365_0455 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013062.1 476595 D 265669 CDS YP_013063.1 46906674 2798679 477058..477666 1 NC_002973.6 hypothetical protein 477666 2798679 LMOf2365_0456 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013063.1 477058 D 265669 CDS YP_013064.1 46906675 2798542 477810..478076 1 NC_002973.6 hypothetical protein 478076 2798542 LMOf2365_0457 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013064.1 477810 D 265669 CDS YP_013065.1 46906676 2798566 478116..478472 1 NC_002973.6 hypothetical protein 478472 2798566 LMOf2365_0458 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013065.1 478116 D 265669 CDS YP_013066.1 46906677 2798523 478648..478902 1 NC_002973.6 hypothetical protein 478902 2798523 LMOf2365_0459 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013066.1 478648 D 265669 CDS YP_013067.1 46906678 2798607 478915..479082 1 NC_002973.6 hypothetical protein 479082 2798607 LMOf2365_0460 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013067.1 478915 D 265669 CDS YP_013068.1 46906679 2797064 479199..479693 1 NC_002973.6 hypothetical protein 479693 2797064 LMOf2365_0461 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013068.1 479199 D 265669 CDS YP_013069.1 46906680 2798375 479903..480169 1 NC_002973.6 hypothetical protein 480169 2798375 LMOf2365_0462 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013069.1 479903 D 265669 CDS YP_013070.1 46906681 2798352 480288..481076 1 NC_002973.6 hypothetical protein 481076 2798352 LMOf2365_0463 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013070.1 480288 D 265669 CDS YP_013071.1 46906682 2798419 481229..481894 1 NC_002973.6 hypothetical protein 481894 2798419 LMOf2365_0464 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013071.1 481229 D 265669 CDS YP_013072.1 46906683 2798465 complement(482137..482376) 1 NC_002973.6 hypothetical protein 482376 2798465 LMOf2365_0465 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013072.1 482137 R 265669 CDS YP_013073.1 46906684 2798390 482394..482981 1 NC_002973.6 hypothetical protein 482981 2798390 LMOf2365_0466 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013073.1 482394 D 265669 CDS YP_013074.1 46906685 2798487 483006..483152 1 NC_002973.6 hypothetical protein 483152 2798487 LMOf2365_0467 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013074.1 483006 D 265669 CDS YP_013075.1 46906686 2799466 483130..483705 1 NC_002973.6 HEAT repeat-containing PBS lyase 483705 2799466 LMOf2365_0468 Listeria monocytogenes serotype 4b str. F2365 HEAT repeat-containing PBS lyase YP_013075.1 483130 D 265669 CDS YP_013076.1 46906687 2799474 483744..483869 1 NC_002973.6 hypothetical protein 483869 2799474 LMOf2365_0469 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013076.1 483744 D 265669 CDS YP_013077.1 46906688 2798451 483988..484089 1 NC_002973.6 hypothetical protein 484089 2798451 LMOf2365_0470 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013077.1 483988 D 265669 CDS YP_013078.1 46906689 2798475 484412..486814 1 NC_002973.6 identified by similarity to SP:P25146; match to protein family HMM PF00560; match to protein family HMM PF00746; match to protein family HMM TIGR01167; internalin A 486814 inlA 2798475 inlA Listeria monocytogenes serotype 4b str. F2365 internalin A YP_013078.1 484412 D 265669 CDS YP_013079.1 46906690 2799544 complement(488906..489373) 1 NC_002973.6 hypothetical protein 489373 2799544 LMOf2365_0473 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013079.1 488906 R 265669 CDS YP_013080.1 46906691 2799186 489490..490335 1 NC_002973.6 identified by similarity to SP:P39315; YtfG protein 490335 2799186 LMOf2365_0474 Listeria monocytogenes serotype 4b str. F2365 YtfG protein YP_013080.1 489490 D 265669 CDS YP_013081.1 46906692 2799504 490530..491108 1 NC_002973.6 hypothetical protein 491108 2799504 LMOf2365_0475 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013081.1 490530 D 265669 CDS YP_013082.1 46906693 2799056 complement(491141..492409) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0457; match to protein family HMM PF00668; hypothetical protein 492409 2799056 LMOf2365_0476 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013082.1 491141 R 265669 CDS YP_013083.1 46906694 2799146 492547..493050 1 NC_002973.6 hypothetical protein 493050 2799146 LMOf2365_0477 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013083.1 492547 D 265669 CDS YP_013084.1 46906695 2799206 complement(493092..495128) 1 NC_002973.6 identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF05223; penicillin-binding protein 495128 2799206 LMOf2365_0478 Listeria monocytogenes serotype 4b str. F2365 penicillin-binding protein YP_013084.1 493092 R 265669 CDS YP_013085.1 46906696 2799144 495300..495614 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0459; hypothetical protein 495614 2799144 LMOf2365_0479 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013085.1 495300 D 265669 CDS YP_013086.1 46906697 2799182 495751..496680 1 NC_002973.6 identified by similarity to SP:Q02115; match to protein family HMM PF03816; match to protein family HMM TIGR00350; transcriptional regulator 496680 2799182 LMOf2365_0480 Listeria monocytogenes serotype 4b str. F2365 transcriptional regulator YP_013086.1 495751 D 265669 CDS YP_013087.1 46906698 2799127 complement(496728..497276) 1 NC_002973.6 identified by similarity to GP:5578868; hypothetical protein 497276 2799127 LMOf2365_0481 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013087.1 496728 R 265669 CDS YP_013088.1 46906699 2799797 497510..498235 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0463; hypothetical protein 498235 2799797 LMOf2365_0482 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013088.1 497510 D 265669 CDS YP_013089.1 46906700 2798276 complement(498279..498944) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0464; hypothetical protein 498944 2798276 LMOf2365_0483 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013089.1 498279 R 265669 CDS YP_013090.1 46906701 2797766 complement(498965..499720) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0465; hypothetical protein 499720 2797766 LMOf2365_0484 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013090.1 498965 R 265669 CDS YP_013091.1 46906702 2797854 complement(499837..501996) 1 NC_002973.6 identified by match to protein family HMM PF01841; peptidase 501996 2797854 LMOf2365_0485 Listeria monocytogenes serotype 4b str. F2365 peptidase YP_013091.1 499837 R 265669 CDS YP_013092.1 46906703 2797829 complement(501993..503141) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0467; match to protein family HMM PF01882; hypothetical protein 503141 2797829 LMOf2365_0486 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013092.1 501993 R 265669 CDS YP_013093.1 46906704 2798196 complement(503146..504093) 1 NC_002973.6 identified by match to protein family HMM PF01078; magnesium chelatase subunit ChII family protein 504093 2798196 LMOf2365_0487 Listeria monocytogenes serotype 4b str. F2365 magnesium chelatase subunit ChII family protein YP_013093.1 503146 R 265669 CDS YP_013094.1 46906705 2797518 504261..505844 1 NC_002973.6 identified by similarity to GP:16412913; hypothetical protein 505844 2797518 LMOf2365_0488 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013094.1 504261 D 265669 CDS YP_013095.1 46906706 2799398 505978..507261 1 NC_002973.6 identified by match to protein family HMM PF02133; cytosine/purines uracil thiamine allantoin permease 507261 2799398 LMOf2365_0489 Listeria monocytogenes serotype 4b str. F2365 cytosine/purines uracil thiamine allantoin permease YP_013095.1 505978 D 265669 CDS YP_013096.1 46906707 2799382 507262..508362 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0471; match to protein family HMM PF06032; hypothetical protein 508362 2799382 LMOf2365_0490 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013096.1 507262 D 265669 CDS YP_013097.1 46906708 2798081 508355..509905 1 NC_002973.6 identified by match to protein family HMM PF01968; match to protein family HMM PF05378; hydantoinase/oxoprolinase 509905 2798081 LMOf2365_0491 Listeria monocytogenes serotype 4b str. F2365 hydantoinase/oxoprolinase YP_013097.1 508355 D 265669 CDS YP_013098.1 46906709 2797396 complement(510079..510306) 1 NC_002973.6 hypothetical protein 510306 2797396 LMOf2365_0492 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013098.1 510079 R 265669 CDS YP_013099.1 46906710 2798897 510541..512079 1 NC_002973.6 hypothetical protein 512079 2798897 LMOf2365_0493 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013099.1 510541 D 265669 CDS YP_013100.1 46906711 2798959 512381..514495 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0798; hypothetical protein 514495 2798959 LMOf2365_0494 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013100.1 512381 D 265669 CDS YP_013101.1 46906712 2799854 514631..516700 1 NC_002973.6 lipoprotein 516700 2799854 LMOf2365_0495 Listeria monocytogenes serotype 4b str. F2365 lipoprotein YP_013101.1 514631 D 265669 CDS YP_013102.1 46906713 2797080 516766..517239 1 NC_002973.6 hypothetical protein 517239 2797080 LMOf2365_0496 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013102.1 516766 D 265669 CDS YP_013103.1 46906714 2799874 517259..517744 1 NC_002973.6 hypothetical protein 517744 2799874 LMOf2365_0497 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013103.1 517259 D 265669 CDS YP_013104.1 46906715 2799831 517796..518077 1 NC_002973.6 identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein 518077 2799831 LMOf2365_0498 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_013104.1 517796 D 265669 CDS YP_013105.1 46906716 2799751 518151..518417 1 NC_002973.6 identified by similarity to OMNI:NTL01LL0091; IS3 family transposase OrfA 518417 2799751 LMOf2365_0499 Listeria monocytogenes serotype 4b str. F2365 IS3 family transposase OrfA YP_013105.1 518151 D 265669 CDS YP_013106.1 46906717 2799239 518926..519102 1 NC_002973.6 hypothetical protein 519102 2799239 LMOf2365_0500 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013106.1 518926 D 265669 CDS YP_013107.1 46906718 2799918 519153..519770 1 NC_002973.6 hypothetical protein 519770 2799918 LMOf2365_0501 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013107.1 519153 D 265669 CDS YP_013108.1 46906719 2798917 520080..520424 1 NC_002973.6 hypothetical protein 520424 2798917 LMOf2365_0502 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013108.1 520080 D 265669 CDS YP_013109.1 46906720 2798071 520831..521073 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1685; hypothetical protein 521073 2798071 LMOf2365_0503 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013109.1 520831 D 265669 CDS YP_013110.1 46906721 2798968 complement(521156..522133) 1 NC_002973.6 identified by similarity to OMNI:NTL01BS00578; match to protein family HMM PF01966; HD domain-containing protein 522133 2798968 LMOf2365_0504 Listeria monocytogenes serotype 4b str. F2365 HD domain-containing protein YP_013110.1 521156 R 265669 CDS YP_013111.1 46906722 2798970 522237..522572 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0472; hypothetical protein 522572 2798970 LMOf2365_0505 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013111.1 522237 D 265669 CDS YP_013112.1 46906723 2798881 523033..523392 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0477; hypothetical protein 523392 2798881 LMOf2365_0506 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013112.1 523033 D 265669 CDS YP_013113.1 46906724 2798915 523644..524204 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0478; hypothetical protein 524204 2798915 LMOf2365_0507 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013113.1 523644 D 265669 CDS YP_013114.1 46906725 2798297 524314..526014 1 NC_002973.6 in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen 526014 2798297 LMOf2365_0508 Listeria monocytogenes serotype 4b str. F2365 myosin-cross-reactive antigen YP_013114.1 524314 D 265669 CDS YP_013115.1 46906726 2797600 526165..527268 1 NC_002973.6 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 527268 2797600 LMOf2365_0509 Listeria monocytogenes serotype 4b str. F2365 ribosomal RNA large subunit methyltransferase N YP_013115.1 526165 D 265669 CDS YP_013116.1 46906727 2798205 527358..527837 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0481; hypothetical protein 527837 2798205 LMOf2365_0510 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013116.1 527358 D 265669 CDS YP_013117.1 46906728 2799860 527995..528360 1 NC_002973.6 iron regulated; catalyzes the release of heme from hemoglobin allowing bacterial pathogens to use the host heme as an iron source; heme-degrading monooxygenase IsdG 528360 2799860 LMOf2365_0511 Listeria monocytogenes serotype 4b str. F2365 heme-degrading monooxygenase IsdG YP_013117.1 527995 D 265669 CDS YP_013118.1 46906729 2797618 528853..530154 1 NC_002973.6 identified by similarity to GP:16412606; hypothetical protein 530154 2797618 LMOf2365_0513 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013118.1 528853 D 265669 CDS YP_013119.1 46906730 2798219 530167..530544 1 NC_002973.6 hypothetical protein 530544 2798219 LMOf2365_0514 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013119.1 530167 D 265669 CDS YP_013120.1 46906731 2799914 530778..531353 1 NC_002973.6 identified by similarity to OMNI:NTL01LM0480; match to protein family HMM PF00881; hypothetical protein 531353 2799914 LMOf2365_0515 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013120.1 530778 D 265669 CDS YP_013121.1 46906732 2799828 531418..531588 1 NC_002973.6 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 531588 rpmF 2799828 rpmF Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L32 YP_013121.1 531418 D 265669 CDS YP_013122.1 46906733 2799641 531680..532408 1 NC_002973.6 identified by match to protein family HMM PF00293; MutT/nudix family protein 532408 2799641 LMOf2365_0517 Listeria monocytogenes serotype 4b str. F2365 MutT/nudix family protein YP_013122.1 531680 D 265669 CDS YP_013123.1 46906734 2799264 complement(532445..533338) 1 NC_002973.6 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 533338 2799264 LMOf2365_0518 Listeria monocytogenes serotype 4b str. F2365 LysR family transcriptional regulator YP_013123.1 532445 R 265669 CDS YP_013124.1 46906735 2799796 533536..535530 1 NC_002973.6 identified by match to protein family HMM PF00070; match to protein family HMM PF00724; NADH:flavin oxidoreductase 535530 2799796 LMOf2365_0519 Listeria monocytogenes serotype 4b str. F2365 NADH:flavin oxidoreductase YP_013124.1 533536 D 265669 CDS YP_013125.1 46906736 2798889 535630..536505 1 NC_002973.6 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 536505 aroE 2798889 aroE Listeria monocytogenes serotype 4b str. F2365 shikimate 5-dehydrogenase YP_013125.1 535630 D 265669 CDS YP_013126.1 46906737 2797406 536571..537329 1 NC_002973.6 catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis; 3-dehydroquinate dehydratase 537329 aroD 2797406 aroD Listeria monocytogenes serotype 4b str. F2365 3-dehydroquinate dehydratase YP_013126.1 536571 D 265669 CDS YP_013127.1 46906738 2798996 complement(537398..538306) 1 NC_002973.6 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 538306 2798996 LMOf2365_0522 Listeria monocytogenes serotype 4b str. F2365 LysR family transcriptional regulator YP_013127.1 537398 R 265669 CDS YP_013128.1 46906739 2797419 complement(538381..540141) 1 NC_002973.6 identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976; CocE/NonD family hydrolase 540141 2797419 LMOf2365_0523 Listeria monocytogenes serotype 4b str. F2365 CocE/NonD family hydrolase YP_013128.1 538381 R 265669 CDS YP_013129.1 46906740 2799384 540333..540926 1 NC_002973.6 identified by match to protein family HMM PF00657; lipase/acylhydrolase 540926 2799384 LMOf2365_0524 Listeria monocytogenes serotype 4b str. F2365 lipase/acylhydrolase YP_013129.1 540333 D 265669 CDS YP_013130.1 46906741 2799617 541112..542071 1 NC_002973.6 identified by match to protein family HMM PF00892; hypothetical protein 542071 2799617 LMOf2365_0525 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013130.1 541112 D 265669 CDS YP_013131.1 46906742 2799820 542146..542370 1 NC_002973.6 identified by similarity to OMNI:SP1473; match to protein family HMM PF05979; hypothetical protein 542370 2799820 LMOf2365_0526 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013131.1 542146 D 265669 CDS YP_013132.1 46906743 2799793 542537..542986 1 NC_002973.6 identified by similarity to SP:P37351; match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01120; ribose 5-phosphate isomerase B 542986 rpiB-2 2799793 rpiB-2 Listeria monocytogenes serotype 4b str. F2365 ribose 5-phosphate isomerase B YP_013132.1 542537 D 265669 CDS YP_013133.1 46906744 2799773 542983..543651 1 NC_002973.6 identified by match to protein family HMM PF00834; ribulose-phosphate 3-epimerase 543651 2799773 LMOf2365_0528 Listeria monocytogenes serotype 4b str. F2365 ribulose-phosphate 3-epimerase YP_013133.1 542983 D 265669 CDS YP_013134.1 46906745 2798231 543658..544308 1 NC_002973.6 identified by match to protein family HMM PF00923; transaldolase 544308 2798231 LMOf2365_0529 Listeria monocytogenes serotype 4b str. F2365 transaldolase YP_013134.1 543658 D 265669 CDS YP_013135.1 46906746 2799913 544417..546477 1 NC_002973.6 identified by match to protein family HMM PF00359; match to protein family HMM PF00874; PTS system IIA component domain-containing protein 546477 2799913 LMOf2365_0530 Listeria monocytogenes serotype 4b str. F2365 PTS system IIA component domain-containing protein YP_013135.1 544417 D 265669 CDS YP_013136.1 46906747 2799906 546481..547083 1 NC_002973.6 identified by similarity to GP:16412942; match to protein family HMM PF01380; SIS domain-containing protein 547083 2799906 LMOf2365_0531 Listeria monocytogenes serotype 4b str. F2365 SIS domain-containing protein YP_013136.1 546481 D 265669 CDS YP_013137.1 46906748 2797599 547111..547578 1 NC_002973.6 identified by match to protein family HMM PF00359; PTS system transporter subunit IIA 547578 2797599 LMOf2365_0532 Listeria monocytogenes serotype 4b str. F2365 PTS system transporter subunit IIA YP_013137.1 547111 D 265669 CDS YP_013138.1 46906749 2797570 547595..547993 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0500; hypothetical protein 547993 2797570 LMOf2365_0533 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013138.1 547595 D 265669 CDS YP_013139.1 46906750 2798256 548004..548654 1 NC_002973.6 identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; ribulose-phosphate 3-epimerase 548654 rpe-1 2798256 rpe-1 Listeria monocytogenes serotype 4b str. F2365 ribulose-phosphate 3-epimerase YP_013139.1 548004 D 265669 CDS YP_013140.1 46906751 2799576 548651..549697 1 NC_002973.6 identified by match to protein family HMM PF00107; zinc-dependent alcohol dehydrogenase 549697 2799576 LMOf2365_0535 Listeria monocytogenes serotype 4b str. F2365 zinc-dependent alcohol dehydrogenase YP_013140.1 548651 D 265669 CDS YP_013141.1 46906752 2798106 549713..550006 1 NC_002973.6 identified by similarity to SP:P37188; match to protein family HMM PF02302; PTS system galactitol-specific transporter subunit IIB 550006 2798106 LMOf2365_0536 Listeria monocytogenes serotype 4b str. F2365 PTS system galactitol-specific transporter subunit IIB YP_013141.1 549713 D 265669 CDS YP_013142.1 46906753 2799379 550021..551292 1 NC_002973.6 identified by similarity to SP:P37189; match to protein family HMM PF03611; PTS system galactitol-specific transporter subunit IIC 551292 2799379 LMOf2365_0537 Listeria monocytogenes serotype 4b str. F2365 PTS system galactitol-specific transporter subunit IIC YP_013142.1 550021 D 265669 CDS YP_013143.1 46906754 2798065 551432..552367 1 NC_002973.6 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251; ribose-phosphate pyrophosphokinase 552367 prs-2 2798065 prs-2 Listeria monocytogenes serotype 4b str. F2365 ribose-phosphate pyrophosphokinase YP_013143.1 551432 D 265669 CDS YP_013144.1 46906755 2797414 552989..553567 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0506; lipoprotein 553567 2797414 LMOf2365_0539 Listeria monocytogenes serotype 4b str. F2365 lipoprotein YP_013144.1 552989 D 265669 CDS YP_013145.1 46906756 2798928 553674..554354 1 NC_002973.6 identified by match to protein family HMM PF00117; glutamine amidotransferase 554354 2798928 LMOf2365_0540 Listeria monocytogenes serotype 4b str. F2365 glutamine amidotransferase YP_013145.1 553674 D 265669 CDS YP_013146.1 46906757 2799562 complement(554379..554738) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0508; hypothetical protein 554738 2799562 LMOf2365_0541 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013146.1 554379 R 265669 CDS YP_013147.1 46906758 2799449 complement(554745..555203) 1 NC_002973.6 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 555203 2799449 LMOf2365_0542 Listeria monocytogenes serotype 4b str. F2365 MarR family transcriptional regulator YP_013147.1 554745 R 265669 CDS YP_013148.1 46906759 2799881 555585..557414 1 NC_002973.6 identified by match to protein family HMM PF00560; match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein 557414 2799881 LMOf2365_0543 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_013148.1 555585 D 265669 CDS YP_013149.1 46906760 2798164 557515..557946 1 NC_002973.6 identified by match to protein family HMM PF00582; universal stress protein 557946 2798164 LMOf2365_0544 Listeria monocytogenes serotype 4b str. F2365 universal stress protein YP_013149.1 557515 D 265669 CDS YP_013150.1 46906761 2797548 complement(557993..559423) 1 NC_002973.6 identified by similarity to OMNI:NTL01BS03583; CapA domain-containing protein 559423 2797548 LMOf2365_0545 Listeria monocytogenes serotype 4b str. F2365 CapA domain-containing protein YP_013150.1 557993 R 265669 CDS YP_013151.1 46906762 2797512 complement(559544..560359) 1 NC_002973.6 identified by match to protein family HMM PF00300; phosphoglycerate mutase 560359 2797512 LMOf2365_0546 Listeria monocytogenes serotype 4b str. F2365 phosphoglycerate mutase YP_013151.1 559544 R 265669 CDS YP_013152.1 46906763 2797458 complement(560640..561008) 1 NC_002973.6 hypothetical protein 561008 2797458 LMOf2365_0547 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013152.1 560640 R 265669 CDS YP_013153.1 46906764 2797134 561155..562570 1 NC_002973.6 identified by similarity to SP:O35018; match to protein family HMM TIGR00711; EmrB/QacA family drug resistance transporter 562570 2797134 LMOf2365_0548 Listeria monocytogenes serotype 4b str. F2365 EmrB/QacA family drug resistance transporter YP_013153.1 561155 D 265669 CDS YP_013154.1 46906765 2797538 562702..563706 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0516; hypothetical protein 563706 2797538 LMOf2365_0549 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013154.1 562702 D 265669 CDS YP_013155.1 46906766 2798173 complement(563739..565055) 1 NC_002973.6 identified by match to protein family HMM PF02056; glycosyl hydrolase 565055 2798173 LMOf2365_0550 Listeria monocytogenes serotype 4b str. F2365 glycosyl hydrolase YP_013155.1 563739 R 265669 CDS YP_013156.1 46906767 2797843 565257..566009 1 NC_002973.6 identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family phosphosugar-binding transcriptional regulator 566009 2797843 LMOf2365_0551 Listeria monocytogenes serotype 4b str. F2365 RpiR family phosphosugar-binding transcriptional regulator YP_013156.1 565257 D 265669 CDS YP_013157.1 46906768 2798172 566116..566559 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0524; hypothetical protein 566559 2798172 LMOf2365_0552 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013157.1 566116 D 265669 CDS YP_013158.1 46906769 2799515 complement(566605..568266) 1 NC_002973.6 identified by match to protein family HMM PF00916; match to protein family HMM PF01740; sulfate transporter family protein 568266 2799515 LMOf2365_0553 Listeria monocytogenes serotype 4b str. F2365 sulfate transporter family protein YP_013158.1 566605 R 265669 CDS YP_013159.1 46906770 2797446 complement(568321..568422) 1 NC_002973.6 hypothetical protein 568422 2797446 LMOf2365_0554 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013159.1 568321 R 265669 CDS YP_013160.1 46906771 2797529 complement(568406..569146) 1 NC_002973.6 identified by similarity to SP:P32184; match to protein family HMM PF00376; MerR family transcriptional regulator 569146 2797529 LMOf2365_0555 Listeria monocytogenes serotype 4b str. F2365 MerR family transcriptional regulator YP_013160.1 568406 R 265669 CDS YP_013161.1 46906772 2799799 569376..570851 1 NC_002973.6 hypothetical protein 570851 2799799 LMOf2365_0556 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013161.1 569376 D 265669 CDS YP_013162.1 46906773 2797219 570844..572340 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0528; hypothetical protein 572340 2797219 LMOf2365_0557 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013162.1 570844 D 265669 CDS YP_013163.1 46906774 2797119 572351..573601 1 NC_002973.6 identified by match to protein family HMM PF00535; glycosyl transferase family protein 573601 2797119 LMOf2365_0558 Listeria monocytogenes serotype 4b str. F2365 glycosyl transferase family protein YP_013163.1 572351 D 265669 CDS YP_013164.1 46906775 2797248 573617..575668 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0530; hypothetical protein 575668 2797248 LMOf2365_0559 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013164.1 573617 D 265669 CDS YP_013165.1 46906776 2797560 575683..576537 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0531; hypothetical protein 576537 2797560 LMOf2365_0560 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013165.1 575683 D 265669 CDS YP_013166.1 46906777 2797432 576597..577427 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0532; hypothetical protein 577427 2797432 LMOf2365_0561 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013166.1 576597 D 265669 CDS YP_013167.1 46906778 2797240 577505..577774 1 NC_002973.6 ACT domain-containing protein; hypothetical protein 577774 2797240 LMOf2365_0562 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013167.1 577505 D 265669 CDS YP_013168.1 46906779 2797218 577793..579148 1 NC_002973.6 identified by match to protein family HMM PF05167; hypothetical protein 579148 2797218 LMOf2365_0563 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013168.1 577793 D 265669 CDS YP_013169.1 46906780 2797209 complement(579188..580156) 1 NC_002973.6 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 580156 2797209 LMOf2365_0564 Listeria monocytogenes serotype 4b str. F2365 LacI family transcriptional regulator YP_013169.1 579188 R 265669 CDS YP_013170.1 46906781 2797168 580328..581650 1 NC_002973.6 identified by match to protein family HMM PF02056; glycosyl hydrolase 581650 2797168 LMOf2365_0565 Listeria monocytogenes serotype 4b str. F2365 glycosyl hydrolase YP_013170.1 580328 D 265669 CDS YP_013171.1 46906782 2797151 581754..583025 1 NC_002973.6 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 583025 2797151 LMOf2365_0566 Listeria monocytogenes serotype 4b str. F2365 allantoate amidohydrolase YP_013171.1 581754 D 265669 CDS YP_013172.1 46906783 2797145 582991..584166 1 NC_002973.6 identified by similarity to SP:P80092; match to protein family HMM PF01546; match to protein family HMM TIGR01891; carboxypeptidase 584166 2797145 LMOf2365_0567 Listeria monocytogenes serotype 4b str. F2365 carboxypeptidase YP_013172.1 582991 D 265669 CDS YP_013173.1 46906784 2797301 complement(584214..585230) 1 NC_002973.6 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase, encoded by lacD1 and lacD2; expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources; tagatose 1,6-diphosphate aldolase 585230 2797301 LMOf2365_0568 Listeria monocytogenes serotype 4b str. F2365 tagatose 1,6-diphosphate aldolase YP_013173.1 584214 R 265669 CDS YP_013174.1 46906785 2797025 585467..586660 1 NC_002973.6 identified by similarity to OMNI:NTL01BS01695; match to protein family HMM PF00144; penicillin-binding protein 586660 2797025 LMOf2365_0569 Listeria monocytogenes serotype 4b str. F2365 penicillin-binding protein YP_013174.1 585467 D 265669 CDS YP_013175.1 46906786 2797056 complement(586701..587621) 1 NC_002973.6 identified by match to protein family HMM PF01497; ABC transporter substrate-binding protein 587621 2797056 LMOf2365_0570 Listeria monocytogenes serotype 4b str. F2365 ABC transporter substrate-binding protein YP_013175.1 586701 R 265669 CDS YP_013176.1 46906787 2799873 complement(587732..588082) 1 NC_002973.6 identified by similarity to SP:P05706; match to protein family HMM PF03829; PTS system glucitol/sorbitol-specific transporter subunit IIA 588082 srlB 2799873 srlB Listeria monocytogenes serotype 4b str. F2365 PTS system glucitol/sorbitol-specific transporter subunit IIA YP_013176.1 587732 R 265669 CDS YP_013177.1 46906788 2798212 complement(588101..589087) 1 NC_002973.6 identified by similarity to GP:4928286; match to protein family HMM PF03612; PTS system glucitol/sorbitol-specific transporter subunit IIBC 589087 srlE 2798212 srlE Listeria monocytogenes serotype 4b str. F2365 PTS system glucitol/sorbitol-specific transporter subunit IIBC YP_013177.1 588101 R 265669 CDS YP_013178.1 46906789 2798197 complement(589108..589629) 1 NC_002973.6 identified by similarity to SP:P56579; match to protein family HMM PF03608; PTS system glucitol/sorbitol-specific transporter subunit IIC 589629 srlA 2798197 srlA Listeria monocytogenes serotype 4b str. F2365 PTS system glucitol/sorbitol-specific transporter subunit IIC YP_013178.1 589108 R 265669 CDS YP_013179.1 46906790 2798191 complement(589654..590034) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0545; hypothetical protein 590034 2798191 LMOf2365_0574 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013179.1 589654 R 265669 CDS YP_013180.1 46906791 2797470 complement(590089..591339) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0546; hypothetical protein 591339 2797470 LMOf2365_0575 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013180.1 590089 R 265669 CDS YP_013181.1 46906792 2797481 complement(591597..592544) 1 NC_002973.6 identified by similarity to SP:P39140; match to protein family HMM PF04198; DNA-binding transcriptional regulator 592544 2797481 LMOf2365_0576 Listeria monocytogenes serotype 4b str. F2365 DNA-binding transcriptional regulator YP_013181.1 591597 R 265669 CDS YP_013182.1 46906793 2799572 592912..593577 1 NC_002973.6 identified by similarity to GP:16412992; hypothetical protein 593577 2799572 LMOf2365_0577 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013182.1 592912 D 265669 CDS YP_013183.1 46906794 2798965 593595..595628 1 NC_002973.6 identified by match to protein family HMM PF00560; hypothetical protein 595628 2798965 LMOf2365_0578 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013183.1 593595 D 265669 CDS YP_013184.1 46906795 2799002 595668..595964 1 NC_002973.6 hypothetical protein 595964 2799002 LMOf2365_0579 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013184.1 595668 D 265669 CDS YP_013185.1 46906796 2798907 596008..596850 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0551; hypothetical protein 596850 2798907 LMOf2365_0580 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013185.1 596008 D 265669 CDS YP_013186.1 46906797 2798870 596926..597957 1 NC_002973.6 identified by match to protein family HMM PF06030; hypothetical protein 597957 2798870 LMOf2365_0581 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013186.1 596926 D 265669 CDS YP_013187.1 46906798 2798039 complement(598014..598649) 1 NC_002973.6 identified by match to protein family HMM PF00571; hypothetical protein 598649 2798039 LMOf2365_0582 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013187.1 598014 R 265669 CDS YP_013188.1 46906799 2798969 598871..600040 1 NC_002973.6 identified by match to protein family HMM PF00465; alcohol dehydrogenase, iron-dependent 600040 2798969 LMOf2365_0583 Listeria monocytogenes serotype 4b str. F2365 alcohol dehydrogenase, iron-dependent YP_013188.1 598871 D 265669 CDS YP_013189.1 46906800 2797407 600130..601608 1 NC_002973.6 identified by similarity to SP:P36574; match to protein family HMM PF00854; match to protein family HMM TIGR00924; proton-dependent oligopeptide transporter 601608 2797407 LMOf2365_0584 Listeria monocytogenes serotype 4b str. F2365 proton-dependent oligopeptide transporter YP_013189.1 600130 D 265669 CDS YP_013190.1 46906801 2799000 601737..602444 1 NC_002973.6 identified by match to protein family HMM PF00300; phosphoglycerate mutase 602444 2799000 LMOf2365_0585 Listeria monocytogenes serotype 4b str. F2365 phosphoglycerate mutase YP_013190.1 601737 D 265669 CDS YP_013191.1 46906802 2799391 602445..603140 1 NC_002973.6 identified by match to protein family HMM PF00300; phosphoglycerate mutase 603140 2799391 LMOf2365_0586 Listeria monocytogenes serotype 4b str. F2365 phosphoglycerate mutase YP_013191.1 602445 D 265669 CDS YP_013192.1 46906803 2798268 complement(603182..604222) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0563; hypothetical protein 604222 2798268 LMOf2365_0587 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013192.1 603182 R 265669 CDS YP_013193.1 46906804 2797001 604622..605527 1 NC_002973.6 identified by match to protein family HMM PF01544; magnesium transporter CorA family protein 605527 2797001 LMOf2365_0588 Listeria monocytogenes serotype 4b str. F2365 magnesium transporter CorA family protein YP_013193.1 604622 D 265669 CDS YP_013194.1 46906805 2797150 complement(605570..606946) 1 NC_002973.6 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 606946 gdhA 2797150 gdhA Listeria monocytogenes serotype 4b str. F2365 glutamate dehydrogenase YP_013194.1 605570 R 265669 CDS YP_013195.1 46906806 2799199 complement(607439..607750) 1 NC_002973.6 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 607750 hisE 2799199 hisE Listeria monocytogenes serotype 4b str. F2365 phosphoribosyl-ATP pyrophosphatase YP_013195.1 607439 R 265669 CDS YP_013196.1 46906807 2797375 complement(607751..608068) 1 NC_002973.6 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 608068 hisI 2797375 hisI Listeria monocytogenes serotype 4b str. F2365 phosphoribosyl-AMP cyclohydrolase YP_013196.1 607751 R 265669 CDS YP_013197.1 46906808 2799414 complement(608065..608820) 1 NC_002973.6 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 608820 hisF 2799414 hisF Listeria monocytogenes serotype 4b str. F2365 imidazole glycerol phosphate synthase subunit HisF YP_013197.1 608065 R 265669 CDS YP_013198.1 46906809 2799429 complement(608810..609532) 1 NC_002973.6 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 609532 hisA 2799429 hisA Listeria monocytogenes serotype 4b str. F2365 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_013198.1 608810 R 265669 CDS YP_013199.1 46906810 2798974 complement(609511..610137) 1 NC_002973.6 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 610137 hisH 2798974 hisH Listeria monocytogenes serotype 4b str. F2365 imidazole glycerol phosphate synthase subunit HisH YP_013199.1 609511 R 265669 CDS YP_013200.1 46906811 2798930 complement(610138..610722) 1 NC_002973.6 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 610722 hisB 2798930 hisB Listeria monocytogenes serotype 4b str. F2365 imidazoleglycerol-phosphate dehydratase YP_013200.1 610138 R 265669 CDS YP_013201.1 46906812 2798888 complement(610723..612006) 1 NC_002973.6 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 612006 hisD 2798888 hisD Listeria monocytogenes serotype 4b str. F2365 histidinol dehydrogenase YP_013201.1 610723 R 265669 CDS YP_013202.1 46906813 2798102 complement(612003..612644) 1 NC_002973.6 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit 612644 hisG 2798102 hisG Listeria monocytogenes serotype 4b str. F2365 ATP phosphoribosyltransferase catalytic subunit YP_013202.1 612003 R 265669 CDS YP_013203.1 46906814 2798902 complement(612644..613822) 1 NC_002973.6 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 613822 hisZ 2798902 hisZ Listeria monocytogenes serotype 4b str. F2365 ATP phosphoribosyltransferase regulatory subunit YP_013203.1 612644 R 265669 CDS YP_013204.1 46906815 2799380 613974..614801 1 NC_002973.6 catalyzes the formation of L-histidinol from L-histidinol phosphate; histidinol-phosphatase 614801 hisK 2799380 hisK Listeria monocytogenes serotype 4b str. F2365 histidinol-phosphatase YP_013204.1 613974 D 265669 CDS YP_013205.1 46906816 2797393 complement(614786..615082) 1 NC_002973.6 identified by similarity to SP:P37429; match to protein family HMM PF01035; match to protein family HMM TIGR00589; methylated-DNA--protein-cysteine methyltransferase 615082 ogt-1 2797393 ogt-1 Listeria monocytogenes serotype 4b str. F2365 methylated-DNA--protein-cysteine methyltransferase YP_013205.1 614786 R 265669 CDS YP_013206.1 46906817 2798910 615159..616190 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0577; hypothetical protein 616190 2798910 LMOf2365_0601 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013206.1 615159 D 265669 CDS YP_013207.1 46906818 2799411 complement(616233..617528) 1 NC_002973.6 identified by match to protein family HMM PF00860; xanthine/uracil permease 617528 2799411 LMOf2365_0602 Listeria monocytogenes serotype 4b str. F2365 xanthine/uracil permease YP_013207.1 616233 R 265669 CDS YP_013208.1 46906819 2798257 617844..619238 1 NC_002973.6 identified by match to protein family HMM PF00232; glycosyl hydrolase 619238 2798257 LMOf2365_0603 Listeria monocytogenes serotype 4b str. F2365 glycosyl hydrolase YP_013208.1 617844 D 265669 CDS YP_013209.1 46906820 2797480 619282..620010 1 NC_002973.6 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 620010 2797480 LMOf2365_0604 Listeria monocytogenes serotype 4b str. F2365 GntR family transcriptional regulator YP_013209.1 619282 D 265669 CDS YP_013210.1 46906821 2797445 620459..621922 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0581; hypothetical protein 621922 2797445 LMOf2365_0605 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013210.1 620459 D 265669 CDS YP_013211.1 46906822 2797494 complement(621977..622435) 1 NC_002973.6 identified by similarity to OMNI:SA0807; hypothetical protein 622435 2797494 LMOf2365_0606 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013211.1 621977 R 265669 CDS YP_013212.1 46906823 2797488 complement(622449..623201) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0583; hypothetical protein 623201 2797488 LMOf2365_0607 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013212.1 622449 R 265669 CDS YP_013213.1 46906824 2797457 623330..623575 1 NC_002973.6 identified by similarity to GP:16413028; hypothetical protein 623575 2797457 LMOf2365_0608 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013213.1 623330 D 265669 CDS YP_013214.1 46906825 2797469 623591..624253 1 NC_002973.6 identified by match to protein family HMM PF02230; phospholipase/carboxylesterase 624253 2797469 LMOf2365_0609 Listeria monocytogenes serotype 4b str. F2365 phospholipase/carboxylesterase YP_013214.1 623591 D 265669 CDS YP_013215.1 46906826 2797450 complement(624284..625468) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0586; hypothetical protein 625468 2797450 LMOf2365_0610 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013215.1 624284 R 265669 CDS YP_013216.1 46906827 2797439 complement(625556..626989) 1 NC_002973.6 iap; p60; autolytic enzyme; can cleave bacterial peptidoglycan; secreted by SecA2 system; invasion associated secreted endopeptidase 626989 iap 2797439 iap Listeria monocytogenes serotype 4b str. F2365 invasion associated secreted endopeptidase YP_013216.1 625556 R 265669 CDS YP_013217.1 46906828 2797464 627408..629738 1 NC_002973.6 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; in some organisms, especially gram positive pathogens, have paralogs that have been found to be nonessential but do function in secretion of a subset of exported proteins; preprotein translocase subunit SecA 629738 2797464 LMOf2365_0612 Listeria monocytogenes serotype 4b str. F2365 preprotein translocase subunit SecA YP_013217.1 627408 D 265669 CDS YP_013218.1 46906829 2797254 629854..631026 1 NC_002973.6 identified by match to protein family HMM PF01594; hypothetical protein 631026 2797254 LMOf2365_0613 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013218.1 629854 D 265669 CDS YP_013219.1 46906830 2797244 631284..631997 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0590; hypothetical protein 631997 2797244 LMOf2365_0614 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013219.1 631284 D 265669 CDS YP_013220.1 46906831 2797427 632065..633090 1 NC_002973.6 identified by similarity to GP:16413035; match to protein family HMM PF06030; hypothetical protein 633090 2797427 LMOf2365_0615 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013220.1 632065 D 265669 CDS YP_013221.1 46906832 2797235 633108..635573 1 NC_002973.6 identified by similarity to GP:16413036; hypothetical protein 635573 2797235 LMOf2365_0616 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013221.1 633108 D 265669 CDS YP_013222.1 46906833 2797223 635685..637088 1 NC_002973.6 identified by similarity to SP:P25078; match to protein family HMM PF00875; match to protein family HMM PF03441; deoxyribodipyrimidine photolyase 637088 phrB 2797223 phrB Listeria monocytogenes serotype 4b str. F2365 deoxyribodipyrimidine photolyase YP_013222.1 635685 D 265669 CDS YP_013223.1 46906834 2797213 637226..637639 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0594; hypothetical protein 637639 2797213 LMOf2365_0618 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013223.1 637226 D 265669 CDS YP_013224.1 46906835 2797196 637639..639408 1 NC_002973.6 identified by similarity to GP:16413039; match to protein family HMM PF02645; match to protein family HMM PF02734; DAK2 domain-containing protein 639408 2797196 LMOf2365_0619 Listeria monocytogenes serotype 4b str. F2365 DAK2 domain-containing protein YP_013224.1 637639 D 265669 CDS YP_013225.1 46906836 2797189 639405..640178 1 NC_002973.6 hypothetical protein 640178 2797189 LMOf2365_0620 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013225.1 639405 D 265669 CDS YP_013226.1 46906837 2797173 640306..640848 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0597; hypothetical protein 640848 2797173 LMOf2365_0621 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013226.1 640306 D 265669 CDS YP_013227.1 46906838 2797177 641099..641875 1 NC_002973.6 identified by similarity to SP:P11097; match to protein family HMM PF01226; formate/nitrite transporter family protein 641875 2797177 LMOf2365_0622 Listeria monocytogenes serotype 4b str. F2365 formate/nitrite transporter family protein YP_013227.1 641099 D 265669 CDS YP_013228.1 46906839 2797156 complement(641913..643019) 1 NC_002973.6 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 643019 metX 2797156 metX Listeria monocytogenes serotype 4b str. F2365 homoserine O-acetyltransferase YP_013228.1 641913 R 265669 CDS YP_013229.1 46906840 2797125 complement(643036..644313) 1 NC_002973.6 identified by similarity to GP:15777939; match to protein family HMM PF01053; match to protein family HMM TIGR01326; O-acetylhomoserine (thiol)-lyase 644313 2797125 LMOf2365_0624 Listeria monocytogenes serotype 4b str. F2365 O-acetylhomoserine (thiol)-lyase YP_013229.1 643036 R 265669 CDS YP_013230.1 46906841 2797603 644760..645287 1 NC_002973.6 identified by match to protein family HMM PF03729; hypothetical protein 645287 2797603 LMOf2365_0625 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013230.1 644760 D 265669 CDS YP_013231.1 46906842 2797204 complement(645376..646077) 1 NC_002973.6 identified by match to protein family HMM PF00027; cyclic nucleotide-binding protein 646077 2797204 LMOf2365_0626 Listeria monocytogenes serotype 4b str. F2365 cyclic nucleotide-binding protein YP_013231.1 645376 R 265669 CDS YP_013232.1 46906843 2799646 complement(646153..646701) 1 NC_002973.6 identified by match to protein family HMM PF02632; BioY family protein 646701 2799646 LMOf2365_0627 Listeria monocytogenes serotype 4b str. F2365 BioY family protein YP_013232.1 646153 R 265669 CDS YP_013233.1 46906844 2797511 646895..647227 1 NC_002973.6 identified by match to protein family HMM PF03551; PadR family transcriptional regulator 647227 2797511 LMOf2365_0628 Listeria monocytogenes serotype 4b str. F2365 PadR family transcriptional regulator YP_013233.1 646895 D 265669 CDS YP_013234.1 46906845 2797226 647220..647810 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0605; hypothetical protein 647810 2797226 LMOf2365_0629 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013234.1 647220 D 265669 CDS YP_013235.1 46906846 2797147 647803..648903 1 NC_002973.6 hypothetical protein 648903 2797147 LMOf2365_0630 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013235.1 647803 D 265669 CDS YP_013236.1 46906847 2797547 649009..649509 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0607; match to protein family HMM PF00583; acetyltransferase 649509 2797547 LMOf2365_0631 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_013236.1 649009 D 265669 CDS YP_013237.1 46906848 2797520 complement(649557..649943) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0608; hypothetical protein 649943 2797520 LMOf2365_0632 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013237.1 649557 R 265669 CDS YP_013238.1 46906849 2799340 complement(649997..650341) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0609; hypothetical protein 650341 2799340 LMOf2365_0633 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013238.1 649997 R 265669 CDS YP_013239.1 46906850 2798282 complement(650490..651830) 1 NC_002973.6 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; hypothetical protein 651830 2798282 LMOf2365_0634 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013239.1 650490 R 265669 CDS YP_013240.1 46906851 2799478 651996..652457 1 NC_002973.6 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 652457 2799478 LMOf2365_0635 Listeria monocytogenes serotype 4b str. F2365 MarR family transcriptional regulator YP_013240.1 651996 D 265669 CDS YP_013241.1 46906852 2799339 652465..654189 1 NC_002973.6 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 654189 2799339 LMOf2365_0636 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein/permease YP_013241.1 652465 D 265669 CDS YP_013242.1 46906853 2799342 654186..656003 1 NC_002973.6 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 656003 2799342 LMOf2365_0637 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein/permease YP_013242.1 654186 D 265669 CDS YP_013243.1 46906854 2799341 656120..656419 1 NC_002973.6 identified by match to protein family HMM PF00581; rhodanese-like domain-containing protein 656419 2799341 LMOf2365_0638 Listeria monocytogenes serotype 4b str. F2365 rhodanese-like domain-containing protein YP_013243.1 656120 D 265669 CDS YP_013244.1 46906855 2798263 complement(656462..658231) 1 NC_002973.6 identified by match to protein family HMM PF00560; match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall anchor domain-containing protein 658231 2798263 LMOf2365_0639 Listeria monocytogenes serotype 4b str. F2365 cell wall anchor domain-containing protein YP_013244.1 656462 R 265669 CDS YP_013245.1 46906856 2798183 complement(658392..659018) 1 NC_002973.6 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase 659018 acpD 2798183 acpD Listeria monocytogenes serotype 4b str. F2365 azoreductase YP_013245.1 658392 R 265669 CDS YP_013246.1 46906857 2798204 659187..659636 1 NC_002973.6 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 659636 2798204 LMOf2365_0641 Listeria monocytogenes serotype 4b str. F2365 MarR family transcriptional regulator YP_013246.1 659187 D 265669 CDS YP_013247.1 46906858 2798161 659639..660580 1 NC_002973.6 identified by match to protein family HMM PF00107; zinc-dependent alcohol dehydrogenase 660580 2798161 LMOf2365_0642 Listeria monocytogenes serotype 4b str. F2365 zinc-dependent alcohol dehydrogenase YP_013247.1 659639 D 265669 CDS YP_013248.1 46906859 2797556 660675..661208 1 NC_002973.6 identified by similarity to OMNI:EF0951; match to protein family HMM PF00583; acetyltransferase 661208 2797556 LMOf2365_0643 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_013248.1 660675 D 265669 CDS YP_013249.1 46906860 2797534 complement(661205..661447) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0620; hypothetical protein 661447 2797534 LMOf2365_0644 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013249.1 661205 R 265669 CDS YP_013250.1 46906861 2797542 661554..663305 1 NC_002973.6 identified by match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase 663305 2797542 LMOf2365_0645 Listeria monocytogenes serotype 4b str. F2365 glycerophosphoryl diester phosphodiesterase YP_013250.1 661554 D 265669 CDS YP_013251.1 46906862 2797524 complement(663344..663838) 1 NC_002973.6 lipoprotein 663838 2797524 LMOf2365_0646 Listeria monocytogenes serotype 4b str. F2365 lipoprotein YP_013251.1 663344 R 265669 CDS YP_013252.1 46906863 2797118 complement(663918..665060) 1 NC_002973.6 identified by match to protein family HMM PF00069; protein kinase domain-containing protein 665060 2797118 LMOf2365_0647 Listeria monocytogenes serotype 4b str. F2365 protein kinase domain-containing protein YP_013252.1 663918 R 265669 CDS YP_013253.1 46906864 2797563 665167..665622 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0624; hypothetical protein 665622 2797563 LMOf2365_0648 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013253.1 665167 D 265669 CDS YP_013254.1 46906865 2797391 665678..666070 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0625; hypothetical protein 666070 2797391 LMOf2365_0649 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013254.1 665678 D 265669 CDS YP_013255.1 46906866 2797420 666167..666907 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0626; match to protein family HMM PF01925; hypothetical protein 666907 2797420 LMOf2365_0650 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013255.1 666167 D 265669 CDS YP_013256.1 46906867 2798913 666993..667271 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0627; hypothetical protein 667271 2798913 LMOf2365_0651 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013256.1 666993 D 265669 CDS YP_013257.1 46906868 2798925 667288..667566 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0628; hypothetical protein 667566 2798925 LMOf2365_0652 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013257.1 667288 D 265669 CDS YP_013258.1 46906869 2798094 complement(667594..668037) 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 668037 2798094 LMOf2365_0653 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_013258.1 667594 R 265669 CDS YP_013259.1 46906870 2797418 complement(668068..668769) 1 NC_002973.6 identified by match to protein family HMM PF00657; lipase/acylhydrolase 668769 2797418 LMOf2365_0654 Listeria monocytogenes serotype 4b str. F2365 lipase/acylhydrolase YP_013259.1 668068 R 265669 CDS YP_013260.1 46906871 2798293 complement(668854..670533) 1 NC_002973.6 hypothetical protein 670533 2798293 LMOf2365_0655 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013260.1 668854 R 265669 CDS YP_013261.1 46906872 2799427 670836..675596 1 NC_002973.6 identified by match to protein family HMM PF05738; match to protein family HMM TIGR01167; match to protein family HMM TIGR01612; cell wall surface anchor family protein 675596 2799427 LMOf2365_0656 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_013261.1 670836 D 265669 CDS YP_013262.1 46906873 2799402 675693..675968 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0633; hypothetical protein 675968 2799402 LMOf2365_0657 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013262.1 675693 D 265669 CDS YP_013263.1 46906874 2797699 676011..676538 1 NC_002973.6 identified by match to protein family HMM PF00857; isochorismatase superfamily hydrolase 676538 2797699 LMOf2365_0658 Listeria monocytogenes serotype 4b str. F2365 isochorismatase superfamily hydrolase YP_013263.1 676011 D 265669 CDS YP_013264.1 46906875 2797748 676899..678929 1 NC_002973.6 identified by match to protein family HMM PF00359; match to protein family HMM PF00874; PTS system IIA component domain-containing protein 678929 2797748 LMOf2365_0659 Listeria monocytogenes serotype 4b str. F2365 PTS system IIA component domain-containing protein YP_013264.1 676899 D 265669 CDS YP_013265.1 46906876 2797729 678931..679383 1 NC_002973.6 identified by similarity to SP:P32155; match to protein family HMM PF00359; match to protein family HMM TIGR00848; PTS system fructose-specific transporter subunit IIA 679383 2797729 LMOf2365_0660 Listeria monocytogenes serotype 4b str. F2365 PTS system fructose-specific transporter subunit IIA YP_013265.1 678931 D 265669 CDS YP_013266.1 46906877 2797780 679384..680445 1 NC_002973.6 FrwC with FrwB, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell; forms translocation channel and contains the specific substrate-binding site; fructose-like permease EIIC subunit 2 680445 2797780 LMOf2365_0661 Listeria monocytogenes serotype 4b str. F2365 fructose-like permease EIIC subunit 2 YP_013266.1 679384 D 265669 CDS YP_013267.1 46906878 2798198 680460..680768 1 NC_002973.6 FrwB with FrwC, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell; cytoplasmic protein that interacts with complex EIIA; contains the second phosphorylation site of the PTS; PTS system fructose-like transporter subunit EIIB 680768 2798198 LMOf2365_0662 Listeria monocytogenes serotype 4b str. F2365 PTS system fructose-like transporter subunit EIIB YP_013267.1 680460 D 265669 CDS YP_013268.1 46906879 2799533 680795..682063 1 NC_002973.6 identified by similarity to GP:15978906; hypothetical protein 682063 2799533 LMOf2365_0663 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013268.1 680795 D 265669 CDS YP_013269.1 46906880 2799532 682153..682857 1 NC_002973.6 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549; HAD family hydrolase 682857 2799532 LMOf2365_0664 Listeria monocytogenes serotype 4b str. F2365 HAD family hydrolase YP_013269.1 682153 D 265669 CDS YP_013270.1 46906881 2797900 682962..683378 1 NC_002973.6 identified by similarity to OMNI:NTL01BH0657; match to protein family HMM PF02082; match to protein family HMM TIGR00738; Rrf2 family protein 683378 2797900 LMOf2365_0665 Listeria monocytogenes serotype 4b str. F2365 Rrf2 family protein YP_013270.1 682962 D 265669 CDS YP_013271.1 46906882 2796999 683391..683984 1 NC_002973.6 identified by match to protein family HMM PF01209; UbiE/COQ5 family methlytransferase 683984 2796999 LMOf2365_0666 Listeria monocytogenes serotype 4b str. F2365 UbiE/COQ5 family methlytransferase YP_013271.1 683391 D 265669 CDS YP_013272.1 46906883 2797890 684684..685355 1 NC_002973.6 identified by similarity to OMNI:SP2182; hypothetical protein 685355 2797890 LMOf2365_0667 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013272.1 684684 D 265669 CDS YP_013273.1 46906884 2799739 685385..685570 1 NC_002973.6 hypothetical protein 685570 2799739 LMOf2365_0668 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013273.1 685385 D 265669 CDS YP_013274.1 46906885 2797874 686111..686644 1 NC_002973.6 identified by similarity to GP:425488; transcriptional regulator 686644 2797874 LMOf2365_0670 Listeria monocytogenes serotype 4b str. F2365 transcriptional regulator YP_013274.1 686111 D 265669 CDS YP_013275.1 46906886 2797717 686708..687625 1 NC_002973.6 identified by match to protein family HMM PF00248; aldo/keto reductase oxidoreductase 687625 2797717 LMOf2365_0671 Listeria monocytogenes serotype 4b str. F2365 aldo/keto reductase oxidoreductase YP_013275.1 686708 D 265669 CDS YP_013276.1 46906887 2797838 687891..689771 1 NC_002973.6 identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525; cadmium-translocating P-type ATPase 689771 cadA 2797838 cadA Listeria monocytogenes serotype 4b str. F2365 cadmium-translocating P-type ATPase YP_013276.1 687891 D 265669 CDS YP_013277.1 46906888 2797651 689866..690594 1 NC_002973.6 hypothetical protein 690594 2797651 LMOf2365_0673 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013277.1 689866 D 265669 CDS YP_013278.1 46906889 2797735 690734..691384 1 NC_002973.6 identified by match to protein family HMM PF00923; transaldolase 691384 2797735 LMOf2365_0674 Listeria monocytogenes serotype 4b str. F2365 transaldolase YP_013278.1 690734 D 265669 CDS YP_013279.1 46906890 2797726 complement(691427..693268) 1 NC_002973.6 identified by match to protein family HMM PF00884; sulfatase 693268 2797726 LMOf2365_0675 Listeria monocytogenes serotype 4b str. F2365 sulfatase YP_013279.1 691427 R 265669 CDS YP_013280.1 46906891 2797690 693482..694873 1 NC_002973.6 identified by match to protein family HMM PF00324; amino acid permease 694873 2797690 LMOf2365_0676 Listeria monocytogenes serotype 4b str. F2365 amino acid permease YP_013280.1 693482 D 265669 CDS YP_013281.1 46906892 2797657 694963..695802 1 NC_002973.6 identified by similarity to OMNI:EF0656; match to protein family HMM PF00903; glyoxalase 695802 2797657 LMOf2365_0677 Listeria monocytogenes serotype 4b str. F2365 glyoxalase YP_013281.1 694963 D 265669 CDS YP_013282.1 46906893 2797806 complement(695885..696169) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0646; hypothetical protein 696169 2797806 LMOf2365_0678 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013282.1 695885 R 265669 CDS YP_013283.1 46906894 2797809 696267..697217 1 NC_002973.6 identified by match to protein family HMM PF01544; magnesium transporter CorA family protein 697217 2797809 LMOf2365_0679 Listeria monocytogenes serotype 4b str. F2365 magnesium transporter CorA family protein YP_013283.1 696267 D 265669 CDS YP_013284.1 46906895 2797929 697241..697882 1 NC_002973.6 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 697882 2797929 LMOf2365_0680 Listeria monocytogenes serotype 4b str. F2365 GntR family transcriptional regulator YP_013284.1 697241 D 265669 CDS YP_013285.1 46906896 2799630 697925..700615 1 NC_002973.6 identified by similarity to SP:P49022; match to protein family HMM TIGR01612; phage infection protein 700615 2799630 LMOf2365_0681 Listeria monocytogenes serotype 4b str. F2365 phage infection protein YP_013285.1 697925 D 265669 CDS YP_013286.1 46906897 2797467 700661..701308 1 NC_002973.6 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 701308 2797467 LMOf2365_0682 Listeria monocytogenes serotype 4b str. F2365 GntR family transcriptional regulator YP_013286.1 700661 D 265669 CDS YP_013287.1 46906898 2797844 complement(701318..701854) 1 NC_002973.6 identified by similarity to OMNI:PG1761; match to protein family HMM PF00583; acetyltransferase 701854 2797844 LMOf2365_0683 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_013287.1 701318 R 265669 CDS YP_013288.1 46906899 2797882 complement(701841..702827) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0652; match to protein family HMM PF06161; hypothetical protein 702827 2797882 LMOf2365_0684 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013288.1 701841 R 265669 CDS YP_013289.1 46906900 2797857 702982..703224 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0653; hypothetical protein 703224 2797857 LMOf2365_0685 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013289.1 702982 D 265669 CDS YP_013290.1 46906901 2797706 703292..703999 1 NC_002973.6 identified by match to protein family HMM PF00149; serine/threonine protein phosphatase 703999 2797706 LMOf2365_0686 Listeria monocytogenes serotype 4b str. F2365 serine/threonine protein phosphatase YP_013290.1 703292 D 265669 CDS YP_013291.1 46906902 2797642 704427..706565 1 NC_002973.6 identified by similarity to OMNI:NTL01HP01062; hypothetical protein 706565 2797642 LMOf2365_0687 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013291.1 704427 D 265669 CDS YP_013292.1 46906903 2797836 complement(706695..707258) 1 NC_002973.6 identified by match to protein family HMM PF04238; hypothetical protein 707258 2797836 LMOf2365_0688 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013292.1 706695 R 265669 CDS YP_013293.1 46906904 2798067 707378..707794 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0656; hypothetical protein 707794 2798067 LMOf2365_0689 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013293.1 707378 D 265669 CDS YP_013294.1 46906905 2797376 707837..708466 1 NC_002973.6 identified by match to protein family HMM PF00730; endonuclease 708466 2797376 LMOf2365_0690 Listeria monocytogenes serotype 4b str. F2365 endonuclease YP_013294.1 707837 D 265669 CDS YP_013295.1 46906906 2799413 complement(708463..709359) 1 NC_002973.6 identified by match to protein family HMM PF01381; match to protein family HMM TIGR01716; transcriptional activator 709359 2799413 LMOf2365_0691 Listeria monocytogenes serotype 4b str. F2365 transcriptional activator YP_013295.1 708463 R 265669 CDS YP_013296.1 46906907 2797387 709593..709874 1 NC_002973.6 identified by similarity to OMNI:NTL01LL0091; match to protein family HMM PF01527; IS3 family transposase OrfA 709874 2797387 LMOf2365_0692 Listeria monocytogenes serotype 4b str. F2365 IS3 family transposase OrfA YP_013296.1 709593 D 265669 CDS YP_013297.1 46906908 2799390 710152..712626 1 NC_002973.6 identified by match to protein family HMM TIGR01167; cell wall surface anchor family protein 712626 2799390 LMOf2365_0693 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_013297.1 710152 D 265669 CDS YP_013298.1 46906909 2799396 712807..713478 1 NC_002973.6 identified by similarity to PIR:AB1110; hypothetical protein 713478 2799396 LMOf2365_0693.1 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013298.1 712807 D 265669 CDS YP_013299.1 46906910 2798043 713667..715283 1 NC_002973.6 identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein 715283 2798043 LMOf2365_0694 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_013299.1 713667 D 265669 CDS YP_013300.1 46906911 2798994 complement(715369..715677) 1 NC_002973.6 identified by match to protein family HMM PF02627; carboxymuconolactone decarboxylase 715677 2798994 LMOf2365_0695 Listeria monocytogenes serotype 4b str. F2365 carboxymuconolactone decarboxylase YP_013300.1 715369 R 265669 CDS YP_013301.1 46906912 2797404 complement(715740..716555) 1 NC_002973.6 identified by match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 716555 thiD-2 2797404 thiD-2 Listeria monocytogenes serotype 4b str. F2365 phosphomethylpyrimidine kinase YP_013301.1 715740 R 265669 CDS YP_013302.1 46906913 2798951 complement(716581..717447) 1 NC_002973.6 identified by match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; cof family hydrolase 717447 2798951 LMOf2365_0697 Listeria monocytogenes serotype 4b str. F2365 cof family hydrolase YP_013302.1 716581 R 265669 CDS YP_013303.1 46906914 2797584 717621..718184 1 NC_002973.6 identified by similarity to OMNI:SP0074; match to protein family HMM PF00132; acetyltransferase 718184 2797584 LMOf2365_0698 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_013303.1 717621 D 265669 CDS YP_013304.1 46906915 2799591 718181..718444 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0666; hypothetical protein 718444 2799591 LMOf2365_0699 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013304.1 718181 D 265669 CDS YP_013305.1 46906916 2798318 718454..718831 1 NC_002973.6 identified by match to protein family HMM PF04241; hypothetical protein 718831 2798318 LMOf2365_0700 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013305.1 718454 D 265669 CDS YP_013306.1 46906917 2799809 718945..719880 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 719880 2799809 LMOf2365_0701 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_013306.1 718945 D 265669 CDS YP_013307.1 46906918 2797850 719873..720643 1 NC_002973.6 identified by match to protein family HMM PF01061; ABC transporter permease 720643 2797850 LMOf2365_0702 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_013307.1 719873 D 265669 CDS YP_013308.1 46906919 2797725 720762..720893 1 NC_002973.6 hypothetical protein 720893 2797725 LMOf2365_0703 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013308.1 720762 D 265669 CDS YP_013309.1 46906920 2798271 720906..721787 1 NC_002973.6 identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase oxidoreductase 721787 2798271 LMOf2365_0704 Listeria monocytogenes serotype 4b str. F2365 short chain dehydrogenase/reductase oxidoreductase YP_013309.1 720906 D 265669 CDS YP_013310.1 46906921 2797601 721805..721981 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0671; hypothetical protein 721981 2797601 LMOf2365_0705 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013310.1 721805 D 265669 CDS YP_013311.1 46906922 2797951 723238..723339 1 NC_002973.6 hypothetical protein 723339 2797951 LMOf2365_0707 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013311.1 723238 D 265669 CDS YP_013312.1 46906923 2799534 723626..724054 1 NC_002973.6 identified by match to protein family HMM PF05656; hypothetical protein 724054 2799534 LMOf2365_0708 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013312.1 723626 D 265669 CDS YP_013313.1 46906924 2797938 complement(724093..724302) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0677; hypothetical protein 724302 2797938 LMOf2365_0709 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013313.1 724093 R 265669 CDS YP_013314.1 46906925 2797009 complement(724321..725241) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0678; hypothetical protein 725241 2797009 LMOf2365_0710 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013314.1 724321 R 265669 CDS YP_013315.1 46906926 2797687 725613..725927 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0679; hypothetical protein 725927 2797687 LMOf2365_0711 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013315.1 725613 D 265669 CDS YP_013316.1 46906927 2797579 725920..726687 1 NC_002973.6 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 726687 fliP 2797579 fliP Listeria monocytogenes serotype 4b str. F2365 flagellar biosynthesis protein FliP YP_013316.1 725920 D 265669 CDS YP_013317.1 46906928 2799383 726700..726972 1 NC_002973.6 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 726972 fliQ 2799383 fliQ Listeria monocytogenes serotype 4b str. F2365 flagellar biosynthesis protein FliQ YP_013317.1 726700 D 265669 CDS YP_013318.1 46906929 2798872 726975..727736 1 NC_002973.6 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 727736 fliR 2798872 fliR Listeria monocytogenes serotype 4b str. F2365 flagellar biosynthesis protein FliR YP_013318.1 726975 D 265669 CDS YP_013319.1 46906930 2798299 727752..728798 1 NC_002973.6 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 728798 flhB 2798299 flhB Listeria monocytogenes serotype 4b str. F2365 flagellar biosynthesis protein FlhB YP_013319.1 727752 D 265669 CDS YP_013320.1 46906931 2798932 728845..730920 1 NC_002973.6 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 730920 flhA 2798932 flhA Listeria monocytogenes serotype 4b str. F2365 flagellar biosynthesis protein FlhA YP_013320.1 728845 D 265669 CDS YP_013321.1 46906932 2797398 730942..732165 1 NC_002973.6 Positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 732165 2797398 LMOf2365_0717 Listeria monocytogenes serotype 4b str. F2365 flagellar biosynthesis regulator FlhF YP_013321.1 730942 D 265669 CDS YP_013322.1 46906933 2798049 732162..732941 1 NC_002973.6 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 732941 flgG 2798049 flgG Listeria monocytogenes serotype 4b str. F2365 flagellar basal body rod protein FlgG YP_013322.1 732162 D 265669 CDS YP_013323.1 46906934 2798046 732970..733758 1 NC_002973.6 identified by similarity to SP:P31105; match to protein family HMM PF01739; match to protein family HMM PF03705; chemotaxis protein CheR 733758 cheR 2798046 cheR Listeria monocytogenes serotype 4b str. F2365 chemotaxis protein CheR YP_013323.1 732970 D 265669 CDS YP_013324.1 46906935 2798957 733783..734118 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0688; hypothetical protein 734118 2798957 LMOf2365_0720 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013324.1 733783 D 265669 CDS YP_013325.1 46906936 2797384 734145..734996 1 NC_002973.6 With Mot B forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.; flagellar motor protein MotA 734996 motA 2797384 motA Listeria monocytogenes serotype 4b str. F2365 flagellar motor protein MotA YP_013325.1 734145 D 265669 CDS YP_013326.1 46906937 2799434 734956..735783 1 NC_002973.6 identified by similarity to SP:P28612; match to protein family HMM PF00691; chemotaxis protein MotB 735783 motB 2799434 motB Listeria monocytogenes serotype 4b str. F2365 chemotaxis protein MotB YP_013326.1 734956 D 265669 CDS YP_013327.1 46906938 2798254 735784..736293 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0691; hypothetical protein 736293 2798254 LMOf2365_0723 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013327.1 735784 D 265669 CDS YP_013328.1 46906939 2798961 736316..738229 1 NC_002973.6 identified by match to protein family HMM PF00515; match to protein family HMM PF00535; glycosyl transferase family protein 738229 2798961 LMOf2365_0724 Listeria monocytogenes serotype 4b str. F2365 glycosyl transferase family protein YP_013328.1 736316 D 265669 CDS YP_013329.1 46906940 2798007 738242..739150 1 NC_002973.6 identified by similarity to SP:P37599; match to protein family HMM PF00072; match to protein family HMM PF01584; chemotaxis protein CheV 739150 cheV 2798007 cheV Listeria monocytogenes serotype 4b str. F2365 chemotaxis protein CheV YP_013329.1 738242 D 265669 CDS YP_013330.1 46906941 2797839 739388..740251 1 NC_002973.6 structural flagella protein; flagellin 740251 2797839 LMOf2365_0726 Listeria monocytogenes serotype 4b str. F2365 flagellin YP_013330.1 739388 D 265669 CDS YP_013331.1 46906942 2797339 740526..740885 1 NC_002973.6 identified by similarity to SP:P24072; match to protein family HMM PF00072; chemotaxis protein CheY 740885 cheY 2797339 cheY Listeria monocytogenes serotype 4b str. F2365 chemotaxis protein CheY YP_013331.1 740526 D 265669 CDS YP_013332.1 46906943 2797307 740905..742761 1 NC_002973.6 identified by similarity to SP:P29072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895; chemotaxis protein CheA 742761 cheA 2797307 cheA Listeria monocytogenes serotype 4b str. F2365 chemotaxis protein CheA YP_013332.1 740905 D 265669 CDS YP_013333.1 46906944 2799747 742774..743073 1 NC_002973.6 identified by match to protein family HMM PF01052; flagellar motor switch protein 743073 2799747 LMOf2365_0729 Listeria monocytogenes serotype 4b str. F2365 flagellar motor switch protein YP_013333.1 742774 D 265669 CDS YP_013334.1 46906945 2799643 743092..743502 1 NC_002973.6 identified by similarity to GP:16413154; hypothetical protein 743502 2799643 LMOf2365_0730 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013334.1 743092 D 265669 CDS YP_013335.1 46906946 2797986 743518..744564 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0699; hypothetical protein 744564 2797986 LMOf2365_0731 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013335.1 743518 D 265669 CDS YP_013336.1 46906947 2798011 744566..744988 1 NC_002973.6 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; flagellar basal body rod modification protein 744988 flgD 2798011 flgD Listeria monocytogenes serotype 4b str. F2365 flagellar basal body rod modification protein YP_013336.1 744566 D 265669 CDS YP_013337.1 46906948 2797288 745008..746243 1 NC_002973.6 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 746243 flgE 2797288 flgE Listeria monocytogenes serotype 4b str. F2365 flagellar hook protein FlgE YP_013337.1 745008 D 265669 CDS YP_013338.1 46906949 2797282 746257..746493 1 NC_002973.6 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 746493 2797282 LMOf2365_0734 Listeria monocytogenes serotype 4b str. F2365 flagellar motor switch protein YP_013338.1 746257 D 265669 CDS YP_013339.1 46906950 2797302 746514..747506 1 NC_002973.6 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 747506 fliM 2797302 fliM Listeria monocytogenes serotype 4b str. F2365 flagellar motor switch protein FliM YP_013339.1 746514 D 265669 CDS YP_013340.1 46906951 2797296 747542..749056 1 NC_002973.6 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 749056 2797296 LMOf2365_0736 Listeria monocytogenes serotype 4b str. F2365 flagellar motor switch protein YP_013340.1 747542 D 265669 CDS YP_013341.1 46906952 2797298 749080..750465 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0705; hypothetical protein 750465 2797298 LMOf2365_0737 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013341.1 749080 D 265669 CDS YP_013342.1 46906953 2798002 750488..751654 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0706; hypothetical protein 751654 2798002 LMOf2365_0738 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013342.1 750488 D 265669 CDS YP_013343.1 46906954 2797980 751761..752225 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0707; hypothetical protein 752225 2797980 LMOf2365_0739 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013343.1 751761 D 265669 CDS YP_013344.1 46906955 2797988 752235..752663 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0708; hypothetical protein 752663 2797988 LMOf2365_0740 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013344.1 752235 D 265669 CDS YP_013345.1 46906956 2797337 752683..754203 1 NC_002973.6 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 754203 flgK 2797337 flgK Listeria monocytogenes serotype 4b str. F2365 flagellar hook-associated protein FlgK YP_013345.1 752683 D 265669 CDS YP_013346.1 46906957 2797349 754215..755090 1 NC_002973.6 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgL 755090 flgL 2797349 flgL Listeria monocytogenes serotype 4b str. F2365 flagellar hook-associated protein FlgL YP_013346.1 754215 D 265669 CDS YP_013347.2 161611352 2797332 755102..756391 1 NC_002973.6 involved in flagellin assembly; flagellar capping protein 756391 fliD 2797332 fliD Listeria monocytogenes serotype 4b str. F2365 flagellar capping protein YP_013347.2 755102 D 265669 CDS YP_013348.1 46906959 2797358 756410..756796 1 NC_002973.6 identified by similarity to SP:P39739; flagellar protein FliS 756796 2797358 LMOf2365_0744 Listeria monocytogenes serotype 4b str. F2365 flagellar protein FliS YP_013348.1 756410 D 265669 CDS YP_013349.1 46906960 2797354 756768..757049 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0713; hypothetical protein 757049 2797354 LMOf2365_0745 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013349.1 756768 D 265669 CDS YP_013350.1 46906961 2797343 757070..757471 1 NC_002973.6 with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB 757471 flgB 2797343 flgB Listeria monocytogenes serotype 4b str. F2365 flagellar basal body rod protein FlgB YP_013350.1 757070 D 265669 CDS YP_013351.1 46906962 2797321 757483..757893 1 NC_002973.6 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 757893 flgC 2797321 flgC Listeria monocytogenes serotype 4b str. F2365 flagellar basal body rod protein FlgC YP_013351.1 757483 D 265669 CDS YP_013352.1 46906963 2797312 757910..758206 1 NC_002973.6 forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 758206 fliE 2797312 fliE Listeria monocytogenes serotype 4b str. F2365 flagellar hook-basal body protein FliE YP_013352.1 757910 D 265669 CDS YP_013353.1 46906964 2797891 758274..759926 1 NC_002973.6 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 759926 fliF 2797891 fliF Listeria monocytogenes serotype 4b str. F2365 flagellar MS-ring protein YP_013353.1 758274 D 265669 CDS YP_013354.1 46906965 2797317 759929..761035 1 NC_002973.6 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 761035 fliG 2797317 fliG Listeria monocytogenes serotype 4b str. F2365 flagellar motor switch protein G YP_013354.1 759929 D 265669 CDS YP_013355.1 46906966 2798019 761022..761714 1 NC_002973.6 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 761714 fliH 2798019 fliH Listeria monocytogenes serotype 4b str. F2365 flagellar assembly protein H YP_013355.1 761022 D 265669 CDS YP_013356.1 46906967 2797360 761711..763012 1 NC_002973.6 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 763012 fliI 2797360 fliI Listeria monocytogenes serotype 4b str. F2365 flagellum-specific ATP synthase YP_013356.1 761711 D 265669 CDS YP_013357.1 46906968 2798025 763029..763697 1 NC_002973.6 identified by match to protein family HMM PF01464; Slt family transglycosylase 763697 2798025 LMOf2365_0753 Listeria monocytogenes serotype 4b str. F2365 Slt family transglycosylase YP_013357.1 763029 D 265669 CDS YP_013358.1 46906969 2797019 763711..764355 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0722; hypothetical protein 764355 2797019 LMOf2365_0754 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013358.1 763711 D 265669 CDS YP_013359.1 46906970 2798029 764474..764800 1 NC_002973.6 identified by match to protein family HMM PF03551; PadR family transcriptional regulator 764800 2798029 LMOf2365_0755 Listeria monocytogenes serotype 4b str. F2365 PadR family transcriptional regulator YP_013359.1 764474 D 265669 CDS YP_013360.1 46906971 2797730 764800..765123 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0724; hypothetical protein 765123 2797730 LMOf2365_0756 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013360.1 764800 D 265669 CDS YP_013361.1 46906972 2797652 complement(765166..765813) 1 NC_002973.6 identified by similarity to GP:15594010; fibronectin-binding protein 765813 2797652 LMOf2365_0757 Listeria monocytogenes serotype 4b str. F2365 fibronectin-binding protein YP_013361.1 765166 R 265669 CDS YP_013362.1 46906973 2798035 766084..767814 1 NC_002973.6 catalyzes the formation of acetyl phosphate from pyruvate; pyruvate oxidase 767814 2798035 LMOf2365_0758 Listeria monocytogenes serotype 4b str. F2365 pyruvate oxidase YP_013362.1 766084 D 265669 CDS YP_013363.1 46906974 2798277 767976..769781 1 NC_002973.6 identified by similarity to SP:P39216; match to protein family HMM PF00015; match to protein family HMM PF00672; methyl-accepting chemotaxis protein 769781 2798277 LMOf2365_0759 Listeria monocytogenes serotype 4b str. F2365 methyl-accepting chemotaxis protein YP_013363.1 767976 D 265669 CDS YP_013364.1 46906975 2797867 769794..770522 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0728; hypothetical protein 770522 2797867 LMOf2365_0760 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013364.1 769794 D 265669 CDS YP_013365.1 46906976 2798206 complement(770565..770777) 1 NC_002973.6 identified by match to protein family HMM PF00746; hypothetical protein 770777 2798206 LMOf2365_0761 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013365.1 770565 R 265669 CDS YP_013366.1 46906977 2798214 771225..773030 1 NC_002973.6 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 773030 glmS 2798214 glmS Listeria monocytogenes serotype 4b str. F2365 glucosamine--fructose-6-phosphate aminotransferase YP_013366.1 771225 D 265669 CDS YP_013367.1 46906978 2797700 773143..773883 1 NC_002973.6 riboflavin kinase/FMN adenylyltransferase 773883 2797700 LMOf2365_0763 Listeria monocytogenes serotype 4b str. F2365 riboflavin kinase/FMN adenylyltransferase YP_013367.1 773143 D 265669 CDS YP_013368.1 46906979 2799807 773966..774445 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0732; hypothetical protein 774445 2799807 LMOf2365_0764 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013368.1 773966 D 265669 CDS YP_013369.1 46906980 2798273 774459..774797 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0733; hypothetical protein 774797 2798273 LMOf2365_0765 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013369.1 774459 D 265669 CDS YP_013370.1 46906981 2799814 774942..775346 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0734; hypothetical protein 775346 2799814 LMOf2365_0766 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013370.1 774942 D 265669 CDS YP_013371.1 46906982 2799842 775656..775766 1 NC_002973.6 hypothetical protein 775766 2799842 LMOf2365_0767 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013371.1 775656 D 265669 CDS YP_013372.1 46906983 2799877 776040..777944 1 NC_002973.6 identified by match to protein family HMM PF00560; cell wall surface anchor family protein 777944 2799877 LMOf2365_0768 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_013372.1 776040 D 265669 CDS YP_013373.1 46906984 2797285 778221..778730 1 NC_002973.6 identified by match to protein family HMM PF01381; DNA-binding protein 778730 2797285 LMOf2365_0769 Listeria monocytogenes serotype 4b str. F2365 DNA-binding protein YP_013373.1 778221 D 265669 CDS YP_013374.1 46906985 2799883 complement(779117..779776) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0738; match to protein family HMM PF00027; hypothetical protein 779776 2799883 LMOf2365_0770 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013374.1 779117 R 265669 CDS YP_013375.1 46906986 2798016 780039..780416 1 NC_002973.6 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 780416 2798016 LMOf2365_0771 Listeria monocytogenes serotype 4b str. F2365 GntR family transcriptional regulator YP_013375.1 780039 D 265669 CDS YP_013376.1 46906987 2799152 780400..781089 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 781089 2799152 LMOf2365_0772 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_013376.1 780400 D 265669 CDS YP_013377.1 46906988 2799811 781086..781790 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0741; ABC transporter permease 781790 2799811 LMOf2365_0773 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_013377.1 781086 D 265669 CDS YP_013378.1 46906989 2799895 781805..783805 1 NC_002973.6 identified by match to protein family HMM PF00005; match to protein family HMM PF02687; ABC transporter ATP-binding protein/permease 783805 2799895 LMOf2365_0774 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein/permease YP_013378.1 781805 D 265669 CDS YP_013379.1 46906990 2799871 783834..784337 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0743; hypothetical protein 784337 2799871 LMOf2365_0775 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013379.1 783834 D 265669 CDS YP_013380.1 46906991 2799915 784776..785612 1 NC_002973.6 identified by match to protein family HMM PF00561; alpha/beta fold family hydrolase 785612 2799915 LMOf2365_0776 Listeria monocytogenes serotype 4b str. F2365 alpha/beta fold family hydrolase YP_013380.1 784776 D 265669 CDS YP_013381.1 46906992 2799897 785738..786418 1 NC_002973.6 identified by match to protein family HMM PF00325; Crp family transcriptional regulator 786418 2799897 LMOf2365_0777 Listeria monocytogenes serotype 4b str. F2365 Crp family transcriptional regulator YP_013381.1 785738 D 265669 CDS YP_013382.1 46906993 2799223 786499..787110 1 NC_002973.6 identified by similarity to GP:14290416; hypothetical protein 787110 2799223 LMOf2365_0778 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013382.1 786499 D 265669 CDS YP_013383.1 46906994 2799068 787225..788046 1 NC_002973.6 identified by similarity to OMNI:EF1683; match to protein family HMM PF00657; lipase/acylhydrolase 788046 2799068 LMOf2365_0779 Listeria monocytogenes serotype 4b str. F2365 lipase/acylhydrolase YP_013383.1 787225 D 265669 CDS YP_013384.1 46906995 2799188 788018..788923 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 788923 2799188 LMOf2365_0780 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_013384.1 788018 D 265669 CDS YP_013385.1 46906996 2799592 788916..789896 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0746; hypothetical protein 789896 2799592 LMOf2365_0781 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013385.1 788916 D 265669 CDS YP_013386.1 46906997 2799903 790023..790913 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0747; match to protein family HMM PF00903; hypothetical protein 790913 2799903 LMOf2365_0782 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013386.1 790023 D 265669 CDS YP_013387.1 46906998 2797974 790910..791869 1 NC_002973.6 identified by similarity to OMNI:EF1669; match to protein family HMM PF00903; glyoxalase 791869 2797974 LMOf2365_0783 Listeria monocytogenes serotype 4b str. F2365 glyoxalase YP_013387.1 790910 D 265669 CDS YP_013388.1 46906999 2799891 791876..792484 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0749; hypothetical protein 792484 2799891 LMOf2365_0784 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013388.1 791876 D 265669 CDS YP_013389.1 46907000 2797977 792494..793114 1 NC_002973.6 hypothetical protein 793114 2797977 LMOf2365_0785 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013389.1 792494 D 265669 CDS YP_013390.1 46907001 2797972 793442..794698 1 NC_002973.6 identified by similarity to OMNI:SP0672; hypothetical protein 794698 2797972 LMOf2365_0786 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013390.1 793442 D 265669 CDS YP_013391.1 46907002 2799919 794764..795636 1 NC_002973.6 identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase 795636 2799919 LMOf2365_0787 Listeria monocytogenes serotype 4b str. F2365 Ser/Thr protein phosphatase YP_013391.1 794764 D 265669 CDS YP_013392.1 46907003 2797969 795642..796631 1 NC_002973.6 identified by match to protein family HMM PF03099; match to protein family HMM TIGR00545; lipoyltransferase and lipoate-protein ligase 796631 2797969 LMOf2365_0788 Listeria monocytogenes serotype 4b str. F2365 lipoyltransferase and lipoate-protein ligase YP_013392.1 795642 D 265669 CDS YP_013393.1 46907004 2797975 796764..797516 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0760; hypothetical protein 797516 2797975 LMOf2365_0789 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013393.1 796764 D 265669 CDS YP_013394.1 46907005 2797970 797551..798198 1 NC_002973.6 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 798198 2797970 LMOf2365_0790 Listeria monocytogenes serotype 4b str. F2365 GntR family transcriptional regulator YP_013394.1 797551 D 265669 CDS YP_013395.1 46907006 2797971 complement(798239..799228) 1 NC_002973.6 identified by match to protein family HMM PF00107; zinc-dependent alcohol dehydrogenase 799228 2797971 LMOf2365_0791 Listeria monocytogenes serotype 4b str. F2365 zinc-dependent alcohol dehydrogenase YP_013395.1 798239 R 265669 CDS YP_013396.1 46907007 2797051 799407..800336 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0763; match to protein family HMM PF00781; match to protein family HMM TIGR00147; hypothetical protein 800336 2797051 LMOf2365_0792 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013396.1 799407 D 265669 CDS YP_013397.1 46907008 2797363 800376..800708 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0764; hypothetical protein 800708 2797363 LMOf2365_0793 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013397.1 800376 D 265669 CDS YP_013398.1 46907009 2797130 complement(800746..801612) 1 NC_002973.6 identified by match to protein family HMM PF00480; ROK family protein 801612 2797130 LMOf2365_0794 Listeria monocytogenes serotype 4b str. F2365 ROK family protein YP_013398.1 800746 R 265669 CDS YP_013399.1 46907010 2797359 801770..802153 1 NC_002973.6 identified by similarity to GP:16413222; hypothetical protein 802153 2797359 LMOf2365_0795 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013399.1 801770 D 265669 CDS YP_013400.1 46907011 2797357 802609..802959 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0128; hypothetical protein 802959 2797357 LMOf2365_0796 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013400.1 802609 D 265669 CDS YP_013401.1 46907012 2797356 complement(803162..803629) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0768; match to protein family HMM PF06173; hypothetical protein 803629 2797356 LMOf2365_0797 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013401.1 803162 R 265669 CDS YP_013402.1 46907013 2797361 complement(803811..804689) 1 NC_002973.6 hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; PTS system mannose-specific transporter subunit IID 804689 2797361 LMOf2365_0798 Listeria monocytogenes serotype 4b str. F2365 PTS system mannose-specific transporter subunit IID YP_013402.1 803811 R 265669 CDS YP_013403.1 46907014 2797352 complement(804707..805522) 1 NC_002973.6 identified by similarity to SP:P08187; match to protein family HMM PF03609; match to protein family HMM TIGR00822; PTS system mannose/fructose/sorbose family transporter subunit IIC 805522 2797352 LMOf2365_0799 Listeria monocytogenes serotype 4b str. F2365 PTS system mannose/fructose/sorbose family transporter subunit IIC YP_013403.1 804707 R 265669 CDS YP_013404.1 46907015 2797346 complement(806904..809720) 1 NC_002973.6 identified by similarity to SP:P23914; match to protein family HMM PF00158; match to protein family HMM PF00874; match to protein family HMM PF03610; sigma-54 dependent transcriptional regulator 809720 2797346 LMOf2365_0801 Listeria monocytogenes serotype 4b str. F2365 sigma-54 dependent transcriptional regulator YP_013404.1 806904 R 265669 CDS YP_013405.1 46907016 2797351 809913..810548 1 NC_002973.6 identified by similarity to SP:P41407; match to protein family HMM PF02525; ACP phosphodiesterase 810548 2797351 LMOf2365_0802 Listeria monocytogenes serotype 4b str. F2365 ACP phosphodiesterase YP_013405.1 809913 D 265669 CDS YP_013406.1 46907017 2797342 810742..812118 1 NC_002973.6 identified by similarity to SP:O06005; match to protein family HMM PF00324; amino acid permease 812118 2797342 LMOf2365_0803 Listeria monocytogenes serotype 4b str. F2365 amino acid permease YP_013406.1 810742 D 265669 CDS YP_013407.1 46907018 2797338 812383..816813 1 NC_002973.6 identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; match to protein family HMM TIGR01612; BadF/BadG/BcrA/BcrD family ATPase 816813 2797338 LMOf2365_0804 Listeria monocytogenes serotype 4b str. F2365 BadF/BadG/BcrA/BcrD family ATPase YP_013407.1 812383 D 265669 CDS YP_013408.1 46907019 2797335 816991..819171 1 NC_002973.6 identified by match to protein family HMM PF00560; match to protein family HMM TIGR01167; cell wall surface anchor family protein 819171 2797335 LMOf2365_0805 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_013408.1 816991 D 265669 CDS YP_013409.1 46907020 2797340 complement(819288..820136) 1 NC_002973.6 identified by similarity to SP:Q51520; match to protein family HMM PF02567; match to protein family HMM TIGR00654; PhzF family phenazine biosynthesis protein 820136 2797340 LMOf2365_0806 Listeria monocytogenes serotype 4b str. F2365 PhzF family phenazine biosynthesis protein YP_013409.1 819288 R 265669 CDS YP_013410.1 46907021 2797330 complement(820163..820639) 1 NC_002973.6 identified by match to protein family HMM PF04073; EbsC protein 820639 2797330 LMOf2365_0807 Listeria monocytogenes serotype 4b str. F2365 EbsC protein YP_013410.1 820163 R 265669 CDS YP_013411.1 46907022 2797328 820763..821413 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0779; hypothetical protein 821413 2797328 LMOf2365_0808 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013411.1 820763 D 265669 CDS YP_013412.1 46907023 2797327 821519..822409 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0780; match to protein family HMM PF00795; carbon-nitrogen family hydrolase 822409 2797327 LMOf2365_0809 Listeria monocytogenes serotype 4b str. F2365 carbon-nitrogen family hydrolase YP_013412.1 821519 D 265669 CDS YP_013413.1 46907024 2797329 complement(822444..823145) 1 NC_002973.6 identified by match to protein family HMM PF04474; hypothetical protein 823145 2797329 LMOf2365_0810 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013413.1 822444 R 265669 CDS YP_013414.1 46907025 2797323 complement(823260..823901) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0782; hypothetical protein 823901 2797323 LMOf2365_0811 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013414.1 823260 R 265669 CDS YP_013415.1 46907026 2797319 complement(823985..824905) 1 NC_002973.6 identified by similarity to SP:P27844; match to protein family HMM PF00892; match to protein family HMM TIGR00688; RarD protein 824905 2797319 LMOf2365_0812 Listeria monocytogenes serotype 4b str. F2365 RarD protein YP_013415.1 823985 R 265669 CDS YP_013416.1 46907027 2797325 complement(825014..825544) 1 NC_002973.6 identified by similarity to GP:3355681; match to protein family HMM PF04264; YceI like family protein 825544 2797325 LMOf2365_0813 Listeria monocytogenes serotype 4b str. F2365 YceI like family protein YP_013416.1 825014 R 265669 CDS YP_013417.1 46907028 2797315 825800..826261 1 NC_002973.6 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 826261 2797315 LMOf2365_0814 Listeria monocytogenes serotype 4b str. F2365 MarR family transcriptional regulator YP_013417.1 825800 D 265669 CDS YP_013418.1 46907029 2797998 complement(826313..827773) 1 NC_002973.6 identified by similarity to SP:P25737; match to protein family HMM PF00324; lysine-specific permease 827773 2797998 LMOf2365_0815 Listeria monocytogenes serotype 4b str. F2365 lysine-specific permease YP_013418.1 826313 R 265669 CDS YP_013419.1 46907030 2797309 complement(828129..828890) 1 NC_002973.6 identified by similarity to SP:P58724; match to protein family HMM PF00785; match to protein family HMM PF01740; match to protein family HMM TIGR00229; blue-light photoreceptor 828890 2797309 LMOf2365_0816 Listeria monocytogenes serotype 4b str. F2365 blue-light photoreceptor YP_013419.1 828129 R 265669 CDS YP_013420.1 46907031 2797314 829043..829396 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0788; hypothetical protein 829396 2797314 LMOf2365_0817 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013420.1 829043 D 265669 CDS YP_013421.1 46907032 2797304 829551..830189 1 NC_002973.6 identified by similarity to OMNI:NTL01LM0796; match to protein family HMM PF04607; hypothetical protein 830189 2797304 LMOf2365_0818 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013421.1 829551 D 265669 CDS YP_013422.1 46907033 2797306 830318..832366 1 NC_002973.6 identified by match to protein family HMM PF00999; match to protein family HMM TIGR00831; Na+/H+ antiporter 832366 2797306 LMOf2365_0819 Listeria monocytogenes serotype 4b str. F2365 Na+/H+ antiporter YP_013422.1 830318 D 265669 CDS YP_013423.1 46907034 2797300 complement(832406..832879) 1 NC_002973.6 hypothetical protein 832879 2797300 LMOf2365_0820 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013423.1 832406 R 265669 CDS YP_013424.1 46907035 2797299 complement(832907..833365) 1 NC_002973.6 hypothetical protein 833365 2797299 LMOf2365_0821 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013424.1 832907 R 265669 CDS YP_013425.1 46907036 2797303 833575..834117 1 NC_002973.6 identified by match to protein family HMM PF01381; DNA-binding protein 834117 2797303 LMOf2365_0822 Listeria monocytogenes serotype 4b str. F2365 DNA-binding protein YP_013425.1 833575 D 265669 CDS YP_013426.1 46907037 2797291 834133..835227 1 NC_002973.6 identified by similarity to SP:P23858; match to protein family HMM PF00005; spermidine/putrescine ABC transporter ATP-binding protein 835227 2797291 LMOf2365_0823 Listeria monocytogenes serotype 4b str. F2365 spermidine/putrescine ABC transporter ATP-binding protein YP_013426.1 834133 D 265669 CDS YP_013427.1 46907038 2797297 835227..836036 1 NC_002973.6 identified by similarity to SP:P23860; match to protein family HMM PF00528; spermidine/putrescine ABC transporter permease 836036 2797297 LMOf2365_0824 Listeria monocytogenes serotype 4b str. F2365 spermidine/putrescine ABC transporter permease YP_013427.1 835227 D 265669 CDS YP_013428.1 46907039 2797290 836033..836839 1 NC_002973.6 identified by similarity to SP:P23859; match to protein family HMM PF00528; spermidine/putrescine ABC transporter permease 836839 2797290 LMOf2365_0825 Listeria monocytogenes serotype 4b str. F2365 spermidine/putrescine ABC transporter permease YP_013428.1 836033 D 265669 CDS YP_013429.1 46907040 2797293 836836..837909 1 NC_002973.6 identified by similarity to SP:P23861; match to protein family HMM PF01547; spermidine/putrescine ABC transporter substrate-binding protein 837909 2797293 LMOf2365_0826 Listeria monocytogenes serotype 4b str. F2365 spermidine/putrescine ABC transporter substrate-binding protein YP_013429.1 836836 D 265669 CDS YP_013430.1 46907041 2797287 838039..838740 1 NC_002973.6 identified by similarity to SP:Q50940; match to protein family HMM PF00194; carbonic anhydrase 838740 cah 2797287 cah Listeria monocytogenes serotype 4b str. F2365 carbonic anhydrase YP_013430.1 838039 D 265669 CDS YP_013431.1 46907042 2797284 838808..839350 1 NC_002973.6 identified by match to protein family HMM PF01966; HD domain-containing protein 839350 2797284 LMOf2365_0828 Listeria monocytogenes serotype 4b str. F2365 HD domain-containing protein YP_013431.1 838808 D 265669 CDS YP_013432.1 46907043 2797281 839486..840358 1 NC_002973.6 identified by similarity to SP:Q07211; match to protein family HMM PF00480; fructokinase 840358 scrK 2797281 scrK Listeria monocytogenes serotype 4b str. F2365 fructokinase YP_013432.1 839486 D 265669 CDS YP_013433.1 46907044 2797286 840443..841369 1 NC_002973.6 identified by similarity to OMNI:SP0419; match to protein family HMM PF03060; enoyl-ACP reductase 841369 2797286 LMOf2365_0830 Listeria monocytogenes serotype 4b str. F2365 enoyl-ACP reductase YP_013433.1 840443 D 265669 CDS YP_013434.1 46907045 2797283 841585..841869 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0353; hypothetical protein 841869 2797283 LMOf2365_0831 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013434.1 841585 D 265669 CDS YP_013435.1 46907046 2798009 841870..842238 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0354; hypothetical protein 842238 2798009 LMOf2365_0832 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013435.1 841870 D 265669 CDS YP_013436.1 46907047 2798014 842235..843710 1 NC_002973.6 identified by similarity to GP:16409438; hypothetical protein 843710 2798014 LMOf2365_0833 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013436.1 842235 D 265669 CDS YP_013437.1 46907048 2797979 843715..844146 1 NC_002973.6 hypothetical protein 844146 2797979 LMOf2365_0834 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013437.1 843715 D 265669 CDS YP_013438.1 46907049 2797294 844224..844496 1 NC_002973.6 hypothetical protein 844496 2797294 LMOf2365_0835 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013438.1 844224 D 265669 CDS YP_013439.1 46907050 2798013 complement(844631..845035) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0808; match to protein family HMM PF00903; hypothetical protein 845035 2798013 LMOf2365_0836 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013439.1 844631 R 265669 CDS YP_013440.1 46907051 2798000 845260..847890 1 NC_002973.6 identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01369; match to protein family HMM TIGR01494; cation transporter E1-E2 family ATPase 847890 2798000 LMOf2365_0837 Listeria monocytogenes serotype 4b str. F2365 cation transporter E1-E2 family ATPase YP_013440.1 845260 D 265669 CDS YP_013441.1 46907052 2798004 847905..848753 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0810; hypothetical protein 848753 2798004 LMOf2365_0838 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013441.1 847905 D 265669 CDS YP_013442.1 46907053 2798006 848863..849420 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 849420 2798006 LMOf2365_0839 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_013442.1 848863 D 265669 CDS YP_013443.1 46907054 2797996 849437..850099 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0812; hypothetical protein 850099 2797996 LMOf2365_0840 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013443.1 849437 D 265669 CDS YP_013444.1 46907055 2797999 complement(850115..850504) 1 NC_002973.6 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 850504 2797999 LMOf2365_0841 Listeria monocytogenes serotype 4b str. F2365 MerR family transcriptional regulator YP_013444.1 850115 R 265669 CDS YP_013445.1 46907056 2797992 850625..851449 1 NC_002973.6 identified by match to protein family HMM PF00248; aldo/keto reductase oxidoreductase 851449 2797992 LMOf2365_0842 Listeria monocytogenes serotype 4b str. F2365 aldo/keto reductase oxidoreductase YP_013445.1 850625 D 265669 CDS YP_013446.1 46907057 2797990 851528..852496 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0815; hypothetical protein 852496 2797990 LMOf2365_0843 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013446.1 851528 D 265669 CDS YP_013447.1 46907058 2797994 852537..853817 1 NC_002973.6 identified by match to protein family HMM PF00368; match to protein family HMM TIGR00532; hydroxymethylglutaryl-CoA reductase, degradative 853817 2797994 LMOf2365_0844 Listeria monocytogenes serotype 4b str. F2365 hydroxymethylglutaryl-CoA reductase, degradative YP_013447.1 852537 D 265669 CDS YP_013448.1 46907059 2797984 854016..855650 1 NC_002973.6 identified by match to protein family HMM PF01895; match to protein family HMM PF02690; match to protein family HMM TIGR00704; Na/Pi-cotransporter family protein 855650 2797984 LMOf2365_0845 Listeria monocytogenes serotype 4b str. F2365 Na/Pi-cotransporter family protein YP_013448.1 854016 D 265669 CDS YP_013449.1 46907060 2797981 855804..859451 1 NC_002973.6 identified by similarity to SP:P03833; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR01612; pyruvate flavodoxin/ferredoxin oxidoreductase 859451 2797981 LMOf2365_0846 Listeria monocytogenes serotype 4b str. F2365 pyruvate flavodoxin/ferredoxin oxidoreductase YP_013449.1 855804 D 265669 CDS YP_013450.1 46907061 2797058 complement(859701..861662) 1 NC_002973.6 identified by similarity to GP:19714343; phosphatase 861662 2797058 LMOf2365_0847 Listeria monocytogenes serotype 4b str. F2365 phosphatase YP_013450.1 859701 R 265669 CDS YP_013451.1 46907062 2799455 complement(861777..862688) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0821; match to protein family HMM PF03547; hypothetical protein 862688 2799455 LMOf2365_0848 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013451.1 861777 R 265669 CDS YP_013452.1 46907063 2797718 863344..863628 1 NC_002973.6 identified by similarity to OMNI:NTL01LL0091; IS3 family transposase OrfA 863628 2797718 LMOf2365_0849 Listeria monocytogenes serotype 4b str. F2365 IS3 family transposase OrfA YP_013452.1 863344 D 265669 CDS YP_013453.1 46907064 2797003 863820..864710 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0348; match to protein family HMM TIGR01716; transcriptional activator 864710 2797003 LMOf2365_0850 Listeria monocytogenes serotype 4b str. F2365 transcriptional activator YP_013453.1 863820 D 265669 CDS YP_013454.1 46907065 2798279 864785..865558 1 NC_002973.6 hypothetical protein 865558 2798279 LMOf2365_0851 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013454.1 864785 D 265669 CDS YP_013455.1 46907066 2798185 865551..866555 1 NC_002973.6 identified by match to protein family HMM TIGR01167; cell wall surface anchor family protein 866555 2798185 LMOf2365_0852 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_013455.1 865551 D 265669 CDS YP_013456.1 46907067 2799765 complement(866598..867011) 1 NC_002973.6 identified by match to protein family HMM PF06146; phosphate-starvation-inducible protein PsiE 867011 2799765 LMOf2365_0853 Listeria monocytogenes serotype 4b str. F2365 phosphate-starvation-inducible protein PsiE YP_013456.1 866598 R 265669 CDS YP_013457.1 46907068 2798126 867184..868821 1 NC_002973.6 identified by similarity to SP:P45861; match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 868821 2798126 LMOf2365_0854 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_013457.1 867184 D 265669 CDS YP_013458.1 46907069 2797901 869115..870500 1 NC_002973.6 cytoplasmic membrane protein that functions as a monomer; catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate; sugar phosphate antiporter 870500 uhpT 2797901 uhpT Listeria monocytogenes serotype 4b str. F2365 sugar phosphate antiporter YP_013458.1 869115 D 265669 CDS YP_013459.1 46907070 2797858 complement(870608..871819) 1 NC_002973.6 identified by similarity to SP:P02982; match to protein family HMM PF00083; tetracycline resistance protein 871819 tetA 2797858 tetA Listeria monocytogenes serotype 4b str. F2365 tetracycline resistance protein YP_013459.1 870608 R 265669 CDS YP_013460.1 46907071 2797875 complement(871949..872419) 1 NC_002973.6 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 872419 2797875 LMOf2365_0857 Listeria monocytogenes serotype 4b str. F2365 MarR family transcriptional regulator YP_013460.1 871949 R 265669 CDS YP_013461.1 46907072 2797643 872621..875263 1 NC_002973.6 identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; cation transport ATPase 875263 2797643 LMOf2365_0858 Listeria monocytogenes serotype 4b str. F2365 cation transport ATPase YP_013461.1 872621 D 265669 CDS YP_013462.1 46907073 2797661 875715..881798 1 NC_002973.6 identified by match to protein family HMM TIGR01167; match to protein family HMM TIGR01612; cell wall surface anchor family protein 881798 2797661 LMOf2365_0859 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_013462.1 875715 D 265669 CDS YP_013463.1 46907074 2797783 complement(881936..882193) 1 NC_002973.6 identified by similarity to SP:Q03440; cytochrome c oxidase subunit IV 882193 2797783 LMOf2365_0860 Listeria monocytogenes serotype 4b str. F2365 cytochrome c oxidase subunit IV YP_013463.1 881936 R 265669 CDS YP_013464.1 46907075 2797707 882272..882649 1 NC_002973.6 identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004; endoribonuclease L-PSP 882649 2797707 LMOf2365_0861 Listeria monocytogenes serotype 4b str. F2365 endoribonuclease L-PSP YP_013464.1 882272 D 265669 CDS YP_013465.1 46907076 2797789 882906..884009 1 NC_002973.6 identified by match to protein family HMM PF01717; vitamin-B12 independent methionine synthase 884009 2797789 LMOf2365_0862 Listeria monocytogenes serotype 4b str. F2365 vitamin-B12 independent methionine synthase YP_013465.1 882906 D 265669 CDS YP_013466.1 46907077 2798032 884114..885214 1 NC_002973.6 identified by similarity to SP:P14951; match to protein family HMM PF01541; match to protein family HMM PF02151; excinuclease ABC subunit C 885214 2798032 LMOf2365_0863 Listeria monocytogenes serotype 4b str. F2365 excinuclease ABC subunit C YP_013466.1 884114 D 265669 CDS YP_013467.1 46907078 2797807 885384..886826 1 NC_002973.6 identified by similarity to SP:P10344; similarity to SP:P10345; match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726; glutamine ABC transporter permease/substrate-binding protein 886826 2797807 LMOf2365_0864 Listeria monocytogenes serotype 4b str. F2365 glutamine ABC transporter permease/substrate-binding protein YP_013467.1 885384 D 265669 CDS YP_013468.1 46907079 2797845 886819..887547 1 NC_002973.6 identified by similarity to SP:P27675; match to protein family HMM PF00005; glutamine ABC transporter ATP-binding protein 887547 2797845 LMOf2365_0865 Listeria monocytogenes serotype 4b str. F2365 glutamine ABC transporter ATP-binding protein YP_013468.1 886819 D 265669 CDS YP_013469.1 46907080 2797736 complement(887596..889443) 1 NC_002973.6 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 889443 2797736 LMOf2365_0866 Listeria monocytogenes serotype 4b str. F2365 amidase YP_013469.1 887596 R 265669 CDS YP_013470.1 46907081 2798034 889977..890156 1 NC_002973.6 identified by similarity to OMNI:NTL01LM0843; hypothetical protein 890156 2798034 LMOf2365_0867 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013470.1 889977 D 265669 CDS YP_013471.1 46907082 2798028 890376..891134 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0839; hypothetical protein 891134 2798028 LMOf2365_0868 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013471.1 890376 D 265669 CDS YP_013472.1 46907083 2798026 891214..891768 1 NC_002973.6 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 891768 2798026 LMOf2365_0869 Listeria monocytogenes serotype 4b str. F2365 TetR family transcriptional regulator YP_013472.1 891214 D 265669 CDS YP_013473.1 46907084 2798030 891785..892126 1 NC_002973.6 identified by similarity to SP:P30743; match to protein family HMM PF00893; SugE protein 892126 sugE-1 2798030 sugE-1 Listeria monocytogenes serotype 4b str. F2365 SugE protein YP_013473.1 891785 D 265669 CDS YP_013474.1 46907085 2798022 892129..892449 1 NC_002973.6 identified by similarity to SP:P30743; match to protein family HMM PF00893; SugE protein 892449 sugE-2 2798022 sugE-2 Listeria monocytogenes serotype 4b str. F2365 SugE protein YP_013474.1 892129 D 265669 CDS YP_013475.1 46907086 2798024 892599..893711 1 NC_002973.6 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 893711 ddl 2798024 ddl Listeria monocytogenes serotype 4b str. F2365 D-alanyl-alanine synthetase A YP_013475.1 892599 D 265669 CDS YP_013476.1 46907087 2798017 893775..895148 1 NC_002973.6 identified by similarity to SP:P96613; match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01143; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 895148 murF 2798017 murF Listeria monocytogenes serotype 4b str. F2365 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_013476.1 893775 D 265669 CDS YP_013477.1 46907088 2798021 895215..895928 1 NC_002973.6 identified by match to protein family HMM PF00561; alpha/beta fold family hydrolase 895928 2798021 LMOf2365_0874 Listeria monocytogenes serotype 4b str. F2365 alpha/beta fold family hydrolase YP_013477.1 895215 D 265669 CDS YP_013478.1 46907089 2799782 complement(895940..896965) 1 NC_002973.6 identified by similarity to SP:P06964; match to protein family HMM PF00532; DNA-binding transcriptional regulator 896965 2799782 LMOf2365_0875 Listeria monocytogenes serotype 4b str. F2365 DNA-binding transcriptional regulator YP_013478.1 895940 R 265669 CDS YP_013479.1 46907090 2798018 897209..898528 1 NC_002973.6 identified by match to protein family HMM PF01547; sugar ABC transporter substrate-binding protein 898528 2798018 LMOf2365_0876 Listeria monocytogenes serotype 4b str. F2365 sugar ABC transporter substrate-binding protein YP_013479.1 897209 D 265669 CDS YP_013480.1 46907091 2797059 898525..899403 1 NC_002973.6 identified by match to protein family HMM PF00528; sugar ABC transporter permease 899403 2797059 LMOf2365_0877 Listeria monocytogenes serotype 4b str. F2365 sugar ABC transporter permease YP_013480.1 898525 D 265669 CDS YP_013481.1 46907092 2797305 899390..900223 1 NC_002973.6 identified by match to protein family HMM PF00528; sugar ABC transporter permease 900223 2797305 LMOf2365_0878 Listeria monocytogenes serotype 4b str. F2365 sugar ABC transporter permease YP_013481.1 899390 D 265669 CDS YP_013482.1 46907093 2797413 900239..901771 1 NC_002973.6 identified by similarity to SP:P28904; match to protein family HMM PF00128; trehalose-6-phosphate hydrolase 901771 treC-1 2797413 treC-1 Listeria monocytogenes serotype 4b str. F2365 trehalose-6-phosphate hydrolase YP_013482.1 900239 D 265669 CDS YP_013483.1 46907094 2798294 901773..902687 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0851; hypothetical protein 902687 2798294 LMOf2365_0880 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013483.1 901773 D 265669 CDS YP_013484.1 46907095 2799381 902709..903776 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0852; hypothetical protein 903776 2799381 LMOf2365_0881 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013484.1 902709 D 265669 CDS YP_013485.1 46907096 2799619 903773..905446 1 NC_002973.6 identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphoglucomutase/phosphomannomutase 905446 2799619 LMOf2365_0882 Listeria monocytogenes serotype 4b str. F2365 phosphoglucomutase/phosphomannomutase YP_013485.1 903773 D 265669 CDS YP_013486.1 46907097 2798960 905422..905529 1 NC_002973.6 hypothetical protein 905529 2798960 LMOf2365_0883 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013486.1 905422 D 265669 CDS YP_013487.1 46907098 2798999 905902..907461 1 NC_002973.6 identified by similarity to SP:P23304; match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent RNA helicase DeaD 907461 2798999 LMOf2365_0884 Listeria monocytogenes serotype 4b str. F2365 ATP-dependent RNA helicase DeaD YP_013487.1 905902 D 265669 CDS YP_013488.1 46907099 2798091 907581..907757 1 NC_002973.6 hypothetical protein 907757 2798091 LMOf2365_0885 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013488.1 907581 D 265669 CDS YP_013489.1 46907100 2799424 907905..908393 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0855; match to protein family HMM PF06177; hypothetical protein 908393 2799424 LMOf2365_0886 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013489.1 907905 D 265669 CDS YP_013490.1 46907101 2799147 complement(908425..908982) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0856; hypothetical protein 908982 2799147 LMOf2365_0887 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013490.1 908425 R 265669 CDS YP_013491.1 46907102 2798175 909084..910082 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0857; match to protein family HMM PF04909; hypothetical protein 910082 2798175 LMOf2365_0888 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013491.1 909084 D 265669 CDS YP_013492.1 46907103 2798184 910099..910410 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0858; hypothetical protein 910410 2798184 LMOf2365_0889 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013492.1 910099 D 265669 CDS YP_013493.1 46907104 2798228 complement(910443..910796) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0864; match to protein family HMM PF01638; hypothetical protein 910796 2798228 LMOf2365_0890 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013493.1 910443 R 265669 CDS YP_013494.1 46907105 2798208 910930..912090 1 NC_002973.6 identified by match to protein family HMM PF00083; major facilitator family transporter 912090 2798208 LMOf2365_0891 Listeria monocytogenes serotype 4b str. F2365 major facilitator family transporter YP_013494.1 910930 D 265669 CDS YP_013495.1 46907106 2799694 912298..914316 1 NC_002973.6 identified by match to protein family HMM PF00359; match to protein family HMM PF00874; PTS system IIA component domain-containing protein 914316 2799694 LMOf2365_0892 Listeria monocytogenes serotype 4b str. F2365 PTS system IIA component domain-containing protein YP_013495.1 912298 D 265669 CDS YP_013496.1 46907107 2799685 914331..914660 1 NC_002973.6 identified by similarity to SP:P23532; match to protein family HMM PF02255; PTS system beta-glucoside-specific transporter subunit IIA 914660 2799685 LMOf2365_0893 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIA YP_013496.1 914331 D 265669 CDS YP_013497.1 46907108 2797920 914661..914996 1 NC_002973.6 identified by similarity to SP:P46318; match to protein family HMM PF02302; PTS system beta-glucoside-specific transporter subunit IIB 914996 2797920 LMOf2365_0894 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIB YP_013497.1 914661 D 265669 CDS YP_013498.1 46907109 2797582 915016..916341 1 NC_002973.6 identified by similarity to SP:P46317; match to protein family HMM PF02378; match to protein family HMM TIGR00410; PTS system beta-glucoside-specific transporter subunit IIC 916341 2797582 LMOf2365_0895 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIC YP_013498.1 915016 D 265669 CDS YP_013499.1 46907110 2797265 916362..917090 1 NC_002973.6 identified by similarity to SP:O35000; match to protein family HMM PF01182; glucosamine-6-phosphate isomerase 917090 2797265 LMOf2365_0896 Listeria monocytogenes serotype 4b str. F2365 glucosamine-6-phosphate isomerase YP_013499.1 916362 D 265669 CDS YP_013500.1 46907111 2799627 917192..918043 1 NC_002973.6 identified by match to protein family HMM PF00248; aldo/keto reductase oxidoreductase 918043 2799627 LMOf2365_0897 Listeria monocytogenes serotype 4b str. F2365 aldo/keto reductase oxidoreductase YP_013500.1 917192 D 265669 CDS YP_013501.1 46907112 2799606 918061..918828 1 NC_002973.6 identified by similarity to OMNI:NTL01BH3349; hypothetical protein 918828 2799606 LMOf2365_0898 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013501.1 918061 D 265669 CDS YP_013502.1 46907113 2799689 918946..920334 1 NC_002973.6 identified by match to protein family HMM PF01476; match to protein family HMM PF05737; lysM domain-containing protein 920334 2799689 LMOf2365_0899 Listeria monocytogenes serotype 4b str. F2365 lysM domain-containing protein YP_013502.1 918946 D 265669 CDS YP_013503.1 46907114 2799583 complement(920380..920856) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0874; hypothetical protein 920856 2799583 LMOf2365_0900 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013503.1 920380 R 265669 CDS YP_013504.1 46907115 2798151 920989..921471 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0875; match to protein family HMM PF03703; hypothetical protein 921471 2798151 LMOf2365_0901 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013504.1 920989 D 265669 CDS YP_013505.1 46907116 2799543 921464..922939 1 NC_002973.6 identified by match to protein family HMM PF03703; hypothetical protein 922939 2799543 LMOf2365_0902 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013505.1 921464 D 265669 CDS YP_013506.1 46907117 2798929 923089..924468 1 NC_002973.6 catalyzes the formation of protoporphyrin IX from protoporphyrinogen IX; protoporphyrinogen oxidase 924468 hemG 2798929 hemG Listeria monocytogenes serotype 4b str. F2365 protoporphyrinogen oxidase YP_013506.1 923089 D 265669 CDS YP_013507.1 46907118 2799570 924470..924826 1 NC_002973.6 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 924826 acpS 2799570 acpS Listeria monocytogenes serotype 4b str. F2365 4'-phosphopantetheinyl transferase YP_013507.1 924470 D 265669 CDS YP_013508.1 46907119 2798069 924845..925951 1 NC_002973.6 identified by match to protein family HMM PF00842; match to protein family HMM PF01168; match to protein family HMM TIGR00492; alanine racemase 925951 alr 2798069 alr Listeria monocytogenes serotype 4b str. F2365 alanine racemase YP_013508.1 924845 D 265669 CDS YP_013509.1 46907120 2799416 926157..926435 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0880; hypothetical protein 926435 2799416 LMOf2365_0906 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013509.1 926157 D 265669 CDS YP_013510.1 46907121 2799577 927036..927872 1 NC_002973.6 identified by similarity to SP:P42409; match to protein family HMM PF01740; modulator protein RsbR 927872 rsbR 2799577 rsbR Listeria monocytogenes serotype 4b str. F2365 modulator protein RsbR YP_013510.1 927036 D 265669 CDS YP_013511.1 46907122 2799378 927878..928234 1 NC_002973.6 identified by similarity to SP:P42410; match to protein family HMM PF01740; anti-sigma factor B antagonist 928234 rsbS 2799378 rsbS Listeria monocytogenes serotype 4b str. F2365 anti-sigma factor B antagonist YP_013511.1 927878 D 265669 CDS YP_013512.1 46907123 2798972 928231..928647 1 NC_002973.6 identified by similarity to SP:P42411; match to protein family HMM PF02518; anti-sigma B factor RsbT 928647 rsbT 2798972 rsbT Listeria monocytogenes serotype 4b str. F2365 anti-sigma B factor RsbT YP_013512.1 928231 D 265669 CDS YP_013513.1 46907124 2797634 928664..929668 1 NC_002973.6 identified by similarity to SP:P40399; sigma factor B regulator protein 929668 2797634 LMOf2365_0911 Listeria monocytogenes serotype 4b str. F2365 sigma factor B regulator protein YP_013513.1 928664 D 265669 CDS YP_013514.1 46907125 2798989 929818..930162 1 NC_002973.6 identified by similarity to SP:P17903; match to protein family HMM PF01740; match to protein family HMM TIGR00377; anti-sigma factor antagonist 930162 2798989 LMOf2365_0912 Listeria monocytogenes serotype 4b str. F2365 anti-sigma factor antagonist YP_013514.1 929818 D 265669 CDS YP_013515.1 46907126 2797737 930146..930619 1 NC_002973.6 binds to sigma-B preventing the formation of an RNA polymerase holoenzyme; serine-protein kinase RsbW 930619 2797737 LMOf2365_0913 Listeria monocytogenes serotype 4b str. F2365 serine-protein kinase RsbW YP_013515.1 930146 D 265669 CDS YP_013516.1 46907127 2799314 930597..931376 1 NC_002973.6 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; RNA polymerase sigma factor SigB 931376 sigB 2799314 sigB Listeria monocytogenes serotype 4b str. F2365 RNA polymerase sigma factor SigB YP_013516.1 930597 D 265669 CDS YP_013517.1 46907128 2798188 931377..931976 1 NC_002973.6 identified by similarity to SP:P17906; sigma-B negative effector 931976 2798188 LMOf2365_0915 Listeria monocytogenes serotype 4b str. F2365 sigma-B negative effector YP_013517.1 931377 D 265669 CDS YP_013518.1 46907129 2798971 932181..933812 1 NC_002973.6 identified by match to protein family HMM PF00916; match to protein family HMM PF01740; match to protein family HMM TIGR00815; sulfate permease 933812 2798971 LMOf2365_0916 Listeria monocytogenes serotype 4b str. F2365 sulfate permease YP_013518.1 932181 D 265669 CDS YP_013519.1 46907130 2798896 933883..936060 1 NC_002973.6 identified by match to protein family HMM PF00575; S1 RNA-binding domain-containing protein 936060 2798896 LMOf2365_0917 Listeria monocytogenes serotype 4b str. F2365 S1 RNA-binding domain-containing protein YP_013519.1 933883 D 265669 CDS YP_013520.1 46907131 2797367 936060..936527 1 NC_002973.6 identified by match to protein family HMM PF03926; hypothetical protein 936527 2797367 LMOf2365_0918 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013520.1 936060 D 265669 CDS YP_013521.1 46907132 2799001 936896..937336 1 NC_002973.6 identified by similarity to SP:P30176; hypothetical protein 937336 2799001 LMOf2365_0919 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013521.1 936896 D 265669 CDS YP_013522.1 46907133 2799406 937352..937837 1 NC_002973.6 hypothetical protein 937837 2799406 LMOf2365_0920 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013522.1 937352 D 265669 CDS YP_013523.1 46907134 2798954 937892..938284 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0893; hypothetical protein 938284 2798954 LMOf2365_0921 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013523.1 937892 D 265669 CDS YP_013524.1 46907135 2797386 938430..939716 1 NC_002973.6 identified by match to protein family HMM PF02378; match to protein family HMM TIGR00359; match to protein family HMM TIGR00410; PTS system cellobiose-specific transporter subunit IIC 939716 celB 2797386 celB Listeria monocytogenes serotype 4b str. F2365 PTS system cellobiose-specific transporter subunit IIC YP_013524.1 938430 D 265669 CDS YP_013525.1 46907136 2798982 939797..940510 1 NC_002973.6 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 940510 2798982 LMOf2365_0923 Listeria monocytogenes serotype 4b str. F2365 GntR family transcriptional regulator YP_013525.1 939797 D 265669 CDS YP_013526.1 46907137 2799872 941006..941386 1 NC_002973.6 identified by match to protein family HMM PF02566; OsmC/Ohr family protein 941386 2799872 LMOf2365_0924 Listeria monocytogenes serotype 4b str. F2365 OsmC/Ohr family protein YP_013526.1 941006 D 265669 CDS YP_013527.1 46907138 2798491 941355..941519 1 NC_002973.6 hypothetical protein 941519 2798491 LMOf2365_0925 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013527.1 941355 D 265669 CDS YP_013528.1 46907139 2799150 941501..942175 1 NC_002973.6 identified by similarity to OMNI:EF1738; hypothetical protein 942175 2799150 LMOf2365_0926 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013528.1 941501 D 265669 CDS YP_013529.1 46907140 2799509 942306..942803 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0898; hypothetical protein 942803 2799509 LMOf2365_0927 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013529.1 942306 D 265669 CDS YP_013530.1 46907141 2799205 942839..944188 1 NC_002973.6 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 944188 gor 2799205 gor Listeria monocytogenes serotype 4b str. F2365 glutathione reductase YP_013530.1 942839 D 265669 CDS YP_013531.1 46907142 2798551 944217..944891 1 NC_002973.6 identified by match to protein family HMM PF00300; phosphoglycerate mutase 944891 2798551 LMOf2365_0929 Listeria monocytogenes serotype 4b str. F2365 phosphoglycerate mutase YP_013531.1 944217 D 265669 CDS YP_013532.1 46907143 2799153 complement(944934..946070) 1 NC_002973.6 identified by match to protein family HMM PF01594; hypothetical protein 946070 2799153 LMOf2365_0930 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013532.1 944934 R 265669 CDS YP_013533.1 46907144 2799786 946211..946603 1 NC_002973.6 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 946603 2799786 LMOf2365_0931 Listeria monocytogenes serotype 4b str. F2365 GntR family transcriptional regulator YP_013533.1 946211 D 265669 CDS YP_013534.1 46907145 2797778 946606..947709 1 NC_002973.6 hypothetical protein 947709 2797778 LMOf2365_0932 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013534.1 946606 D 265669 CDS YP_013535.1 46907146 2798194 947792..948295 1 NC_002973.6 identified by similarity to OMNI:NTL01BH2122; hypothetical protein 948295 2798194 LMOf2365_0933 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013535.1 947792 D 265669 CDS YP_013536.1 46907147 2799745 948409..949221 1 NC_002973.6 identified by similarity to SP:P21501; match to protein family HMM PF01226; match to protein family HMM TIGR00790; formate/nitrite transporter family protein 949221 2799745 LMOf2365_0934 Listeria monocytogenes serotype 4b str. F2365 formate/nitrite transporter family protein YP_013536.1 948409 D 265669 CDS YP_013537.1 46907148 2799735 949446..950912 1 NC_002973.6 identified by similarity to SP:P25526; match to protein family HMM PF00171; succinate-semialdehyde dehydrogenase 950912 gabD 2799735 gabD Listeria monocytogenes serotype 4b str. F2365 succinate-semialdehyde dehydrogenase YP_013537.1 949446 D 265669 CDS YP_013538.1 46907149 2797835 951056..951361 1 NC_002973.6 identified by similarity to SP:Q45399; match to protein family HMM PF02302; PTS system cellobiose-specific transporter subunit IIB 951361 2797835 LMOf2365_0936 Listeria monocytogenes serotype 4b str. F2365 PTS system cellobiose-specific transporter subunit IIB YP_013538.1 951056 D 265669 CDS YP_013539.1 46907150 2797762 951366..952634 1 NC_002973.6 identified by similarity to SP:P46317; match to protein family HMM PF02378; PTS system transporter subunit IIC 952634 2797762 LMOf2365_0937 Listeria monocytogenes serotype 4b str. F2365 PTS system transporter subunit IIC YP_013539.1 951366 D 265669 CDS YP_013540.1 46907151 2799668 952649..952999 1 NC_002973.6 identified by similarity to SP:P26426; match to protein family HMM PF02255; PTS system beta-glucoside-specific transporter subunit IIA 952999 2799668 LMOf2365_0938 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIA YP_013540.1 952649 D 265669 CDS YP_013541.1 46907152 2797087 953011..954462 1 NC_002973.6 identified by similarity to SP:P40740; match to protein family HMM PF00232; beta-glucosidase 954462 bglH-2 2797087 bglH-2 Listeria monocytogenes serotype 4b str. F2365 beta-glucosidase YP_013541.1 953011 D 265669 CDS YP_013542.1 46907153 2799387 954535..956433 1 NC_002973.6 identified by match to protein family HMM PF00359; match to protein family HMM PF00874; PRD/PTS system IIA 2 domain-containing protein 956433 2799387 LMOf2365_0940 Listeria monocytogenes serotype 4b str. F2365 PRD/PTS system IIA 2 domain-containing protein YP_013542.1 954535 D 265669 CDS YP_013543.1 46907154 2799420 956725..958296 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 958296 2799420 LMOf2365_0941 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_013543.1 956725 D 265669 CDS YP_013544.1 46907155 2797390 958418..959458 1 NC_002973.6 identified by match to protein family HMM PF03773; ABC transporter permease 959458 2797390 LMOf2365_0942 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_013544.1 958418 D 265669 CDS YP_013545.1 46907156 2799569 959477..960316 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0914; hypothetical protein 960316 2799569 LMOf2365_0943 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013545.1 959477 D 265669 CDS YP_013546.1 46907157 2798077 960405..961325 1 NC_002973.6 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 961325 coaA 2798077 coaA Listeria monocytogenes serotype 4b str. F2365 pantothenate kinase YP_013546.1 960405 D 265669 CDS YP_013547.1 46907158 2798105 961441..962163 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 962163 2798105 LMOf2365_0945 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_013547.1 961441 D 265669 CDS YP_013548.1 46907159 2798438 962163..963278 1 NC_002973.6 ABC transporter permease 963278 2798438 LMOf2365_0946 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_013548.1 962163 D 265669 CDS YP_013549.1 46907160 2798623 963331..963957 1 NC_002973.6 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 963957 2798623 LMOf2365_0947 Listeria monocytogenes serotype 4b str. F2365 TetR family transcriptional regulator YP_013549.1 963331 D 265669 CDS YP_013550.1 46907161 2798571 complement(963989..965950) 1 NC_002973.6 identified by match to protein family HMM PF00884; sulfatase 965950 2798571 LMOf2365_0948 Listeria monocytogenes serotype 4b str. F2365 sulfatase YP_013550.1 963989 R 265669 CDS YP_013551.1 46907162 2798395 966209..966832 1 NC_002973.6 responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 966832 2798395 LMOf2365_0949 Listeria monocytogenes serotype 4b str. F2365 3-methyladenine DNA glycosylase YP_013551.1 966209 D 265669 CDS YP_013552.1 46907163 2798526 966941..967609 1 NC_002973.6 identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; sortase 967609 2798526 LMOf2365_0950 Listeria monocytogenes serotype 4b str. F2365 sortase YP_013552.1 966941 D 265669 CDS YP_013553.1 46907164 2798540 967722..968453 1 NC_002973.6 identified by similarity to OMNI:NTL01BS01024; match to protein family HMM PF00753; hypothetical protein 968453 2798540 LMOf2365_0951 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013553.1 967722 D 265669 CDS YP_013554.1 46907165 2798605 968477..969472 1 NC_002973.6 identified by similarity to SP:P32099; match to protein family HMM PF03099; match to protein family HMM TIGR00545; lipoyltransferase and lipoate-protein ligase 969472 2798605 LMOf2365_0952 Listeria monocytogenes serotype 4b str. F2365 lipoyltransferase and lipoate-protein ligase YP_013554.1 968477 D 265669 CDS YP_013555.1 46907166 2798529 complement(969512..970117) 1 NC_002973.6 identified by similarity to OMNI:SA0967; hypothetical protein 970117 2798529 LMOf2365_0953 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013555.1 969512 R 265669 CDS YP_013556.1 46907167 2798461 complement(970244..972301) 1 NC_002973.6 identified by match to protein family HMM PF02366; dolichyl-phosphate-mannose-protein mannosyltransferase 972301 2798461 LMOf2365_0954 Listeria monocytogenes serotype 4b str. F2365 dolichyl-phosphate-mannose-protein mannosyltransferase YP_013556.1 970244 R 265669 CDS YP_013557.1 46907168 2798410 973818..974327 1 NC_002973.6 identified by match to protein family HMM PF00588; match to protein family HMM TIGR00185; RNA methyltransferase 974327 2798410 LMOf2365_0956 Listeria monocytogenes serotype 4b str. F2365 RNA methyltransferase YP_013557.1 973818 D 265669 CDS YP_013558.1 46907169 2798195 974340..975080 1 NC_002973.6 identified by match to protein family HMM PF00881; nitroreductase 975080 2798195 LMOf2365_0957 Listeria monocytogenes serotype 4b str. F2365 nitroreductase YP_013558.1 974340 D 265669 CDS YP_013559.1 46907170 2799687 complement(975130..975291) 1 NC_002973.6 hypothetical protein 975291 2799687 LMOf2365_0958 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013559.1 975130 R 265669 CDS YP_013560.1 46907171 2799804 complement(975379..975837) 1 NC_002973.6 identified by match to protein family HMM PF01451; low molecular weight phosphotyrosine protein phosphatase 975837 2799804 LMOf2365_0959 Listeria monocytogenes serotype 4b str. F2365 low molecular weight phosphotyrosine protein phosphatase YP_013560.1 975379 R 265669 CDS YP_013561.1 46907172 2798645 complement(975850..976596) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0929; hypothetical protein 976596 2798645 LMOf2365_0960 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013561.1 975850 R 265669 CDS YP_013562.1 46907173 2798584 complement(976692..977660) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0930; hypothetical protein 977660 2798584 LMOf2365_0961 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013562.1 976692 R 265669 CDS YP_013563.1 46907174 2799404 complement(977672..979477) 1 NC_002973.6 identified by match to protein family HMM PF02518; HSP90 family protein 979477 2799404 LMOf2365_0962 Listeria monocytogenes serotype 4b str. F2365 HSP90 family protein YP_013563.1 977672 R 265669 CDS YP_013564.1 46907175 2798911 979680..980150 1 NC_002973.6 identified by similarity to GP:8272443; match to protein family HMM PF00210; peroxide resistance protein Dpr 980150 2798911 LMOf2365_0963 Listeria monocytogenes serotype 4b str. F2365 peroxide resistance protein Dpr YP_013564.1 979680 D 265669 CDS YP_013565.1 46907176 2798990 980384..980686 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0933; hypothetical protein 980686 2798990 LMOf2365_0964 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013565.1 980384 D 265669 CDS YP_013566.1 46907177 2799615 980799..981929 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0934; match to protein family HMM PF00633; match to protein family HMM PF00753; lipoprotein 981929 2799615 LMOf2365_0965 Listeria monocytogenes serotype 4b str. F2365 lipoprotein YP_013566.1 980799 D 265669 CDS YP_013567.1 46907178 2798050 981939..982166 1 NC_002973.6 identified by similarity to GP:16413404; hypothetical protein 982166 2798050 LMOf2365_0966 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013567.1 981939 D 265669 CDS YP_013568.1 46907179 2799409 complement(982365..983582) 1 NC_002973.6 transporter 983582 2799409 LMOf2365_0967 Listeria monocytogenes serotype 4b str. F2365 transporter YP_013568.1 982365 R 265669 CDS YP_013569.1 46907180 2797423 complement(983579..984268) 1 NC_002973.6 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 984268 2797423 LMOf2365_0968 Listeria monocytogenes serotype 4b str. F2365 GntR family transcriptional regulator YP_013569.1 983579 R 265669 CDS YP_013570.1 46907181 2799436 984390..985436 1 NC_002973.6 identified by match to protein family HMM PF01594; hypothetical protein 985436 2799436 LMOf2365_0969 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013570.1 984390 D 265669 CDS YP_013571.1 46907182 2799415 complement(985446..986345) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0939; match to protein family HMM PF06028; hypothetical protein 986345 2799415 LMOf2365_0970 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013571.1 985446 R 265669 CDS YP_013572.1 46907183 2799578 complement(986366..987187) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0940; match to protein family HMM PF06028; hypothetical protein 987187 2799578 LMOf2365_0971 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013572.1 986366 R 265669 CDS YP_013573.1 46907184 2797910 987345..987803 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0941; hypothetical protein 987803 2797910 LMOf2365_0972 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013573.1 987345 D 265669 CDS YP_013574.1 46907185 2799281 987897..988130 1 NC_002973.6 lipoprotein 988130 2799281 LMOf2365_0973 Listeria monocytogenes serotype 4b str. F2365 lipoprotein YP_013574.1 987897 D 265669 CDS YP_013575.1 46907186 2799306 988358..988672 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0943; hypothetical protein 988672 2799306 LMOf2365_0974 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013575.1 988358 D 265669 CDS YP_013576.1 46907187 2799610 988688..989533 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0944; hypothetical protein 989533 2799610 LMOf2365_0975 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013576.1 988688 D 265669 CDS YP_013577.1 46907188 2797252 989724..990857 1 NC_002973.6 identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221; N-acetylglucosamine-6-phosphate deacetylase 990857 nagA-1 2797252 nagA-1 Listeria monocytogenes serotype 4b str. F2365 N-acetylglucosamine-6-phosphate deacetylase YP_013577.1 989724 D 265669 CDS YP_013578.1 46907189 2798582 990873..991577 1 NC_002973.6 identified by match to protein family HMM PF01182; match to protein family HMM TIGR00502; glucosamine-6-phosphate isomerase 991577 nagB 2798582 nagB Listeria monocytogenes serotype 4b str. F2365 glucosamine-6-phosphate isomerase YP_013578.1 990873 D 265669 CDS YP_013579.1 46907190 2798583 991593..992315 1 NC_002973.6 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 992315 2798583 LMOf2365_0978 Listeria monocytogenes serotype 4b str. F2365 GntR family transcriptional regulator YP_013579.1 991593 D 265669 CDS YP_013580.1 46907191 2798546 992435..993490 1 NC_002973.6 identified by similarity to OMNI:NTL01SA0723; match to protein family HMM PF00953; llm protein 993490 2798546 LMOf2365_0979 Listeria monocytogenes serotype 4b str. F2365 llm protein YP_013580.1 992435 D 265669 CDS YP_013581.1 46907192 2798291 993603..994511 1 NC_002973.6 identified by match to protein family HMM PF01136; peptidase 994511 2798291 LMOf2365_0980 Listeria monocytogenes serotype 4b str. F2365 peptidase YP_013581.1 993603 D 265669 CDS YP_013582.1 46907193 2797256 994526..995752 1 NC_002973.6 identified by match to protein family HMM PF01136; U32 family peptidase 995752 2797256 LMOf2365_0981 Listeria monocytogenes serotype 4b str. F2365 U32 family peptidase YP_013582.1 994526 D 265669 CDS YP_013583.1 46907194 2798453 995836..996393 1 NC_002973.6 identified by similarity to GP:1519287; match to protein family HMM PF04011; LemA protein 996393 2798453 LMOf2365_0982 Listeria monocytogenes serotype 4b str. F2365 LemA protein YP_013583.1 995836 D 265669 CDS YP_013584.1 46907195 2798261 996416..997330 1 NC_002973.6 metalloprotease; heat shock protein HtpX 997330 2798261 LMOf2365_0983 Listeria monocytogenes serotype 4b str. F2365 heat shock protein HtpX YP_013584.1 996416 D 265669 CDS YP_013585.1 46907196 2798270 complement(997368..998186) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0953; match to protein family HMM PF01323; hypothetical protein 998186 2798270 LMOf2365_0984 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013585.1 997368 R 265669 CDS YP_013586.1 46907197 2797187 complement(998424..999008) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0954; match to protein family HMM PF01928; hypothetical protein 999008 2797187 LMOf2365_0985 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013586.1 998424 R 265669 CDS YP_013587.1 46907198 2798400 complement(999025..999492) 1 NC_002973.6 identified by match to protein family HMM PF00515; hypothetical protein 999492 2798400 LMOf2365_0986 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013587.1 999025 R 265669 CDS YP_013588.1 46907199 2797935 999651..1000319 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0956; match to protein family HMM PF04607; hypothetical protein 1000319 2797935 LMOf2365_0987 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013588.1 999651 D 265669 CDS YP_013589.1 46907200 2798403 1000351..1001145 1 NC_002973.6 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1001145 ppnK 2798403 ppnK Listeria monocytogenes serotype 4b str. F2365 inorganic polyphosphate/ATP-NAD kinase YP_013589.1 1000351 D 265669 CDS YP_013590.1 46907201 2797493 1001164..1002054 1 NC_002973.6 identified by match to protein family HMM PF00849; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase D 1002054 2797493 LMOf2365_0989 Listeria monocytogenes serotype 4b str. F2365 ribosomal large subunit pseudouridine synthase D YP_013590.1 1001164 D 265669 CDS YP_013591.1 46907202 2799699 1002132..1002920 1 NC_002973.6 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 1002920 fabI 2799699 fabI Listeria monocytogenes serotype 4b str. F2365 enoyl-ACP reductase YP_013591.1 1002132 D 265669 CDS YP_013592.1 46907203 2799652 complement(1002948..1004222) 1 NC_002973.6 identified by similarity to SP:P39578; match to protein family HMM PF04914; match to protein family HMM PF04915; match to protein family HMM PF04918; DltD protein 1004222 dltD 2799652 dltD Listeria monocytogenes serotype 4b str. F2365 DltD protein YP_013592.1 1002948 R 265669 CDS YP_013593.1 46907204 2797133 complement(1004222..1004458) 1 NC_002973.6 D-alanyl carrier protein subunit; involved in the incorporation of D-alanine into membrane-associated D-alanyl-lipoteichoic acid; D-alanyl carrier protein is the acceptor of activated D-alanine which it donates to a membrane acceptor(D-alanyl transferase) for incorporation into membrane lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 2 1004458 dltC 2797133 dltC Listeria monocytogenes serotype 4b str. F2365 D-alanine--poly(phosphoribitol) ligase subunit 2 YP_013593.1 1004222 R 265669 CDS YP_013594.1 46907205 2799653 complement(1004484..1005668) 1 NC_002973.6 identified by similarity to SP:P39580; match to protein family HMM PF03062; DltB protein 1005668 dltB 2799653 dltB Listeria monocytogenes serotype 4b str. F2365 DltB protein YP_013594.1 1004484 R 265669 CDS YP_013595.1 46907206 2799331 complement(1005665..1007197) 1 NC_002973.6 transfers D-alanine to the D-alanyl carrier protein during the incorporation of D-alanine into lipoteichoic acid; D-alanine--poly(phosphoribitol) ligase subunit 1 1007197 dltA 2799331 dltA Listeria monocytogenes serotype 4b str. F2365 D-alanine--poly(phosphoribitol) ligase subunit 1 YP_013595.1 1005665 R 265669 CDS YP_013596.1 46907207 2799651 complement(1007234..1007380) 1 NC_002973.6 hypothetical protein 1007380 2799651 LMOf2365_0995 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013596.1 1007234 R 265669 CDS YP_013597.1 46907208 2799095 1007588..1008262 1 NC_002973.6 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1008262 rpiA 2799095 rpiA Listeria monocytogenes serotype 4b str. F2365 ribose-5-phosphate isomerase A YP_013597.1 1007588 D 265669 CDS YP_013598.1 46907209 2796997 complement(1008307..1008741) 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 1008741 2796997 LMOf2365_0997 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_013598.1 1008307 R 265669 CDS YP_013599.1 46907210 2799111 complement(1008759..1009508) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0966; match to protein family HMM PF00756; hypothetical protein 1009508 2799111 LMOf2365_0998 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013599.1 1008759 R 265669 CDS YP_013600.1 46907211 2799268 1009727..1010746 1 NC_002973.6 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 1010746 ilvE 2799268 ilvE Listeria monocytogenes serotype 4b str. F2365 branched-chain amino acid aminotransferase YP_013600.1 1009727 D 265669 CDS YP_013601.1 46907212 2799254 1010944..1011708 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1011708 2799254 LMOf2365_1000 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_013601.1 1010944 D 265669 CDS YP_013602.1 46907213 2799293 1011705..1012457 1 NC_002973.6 identified by similarity to SP:P32011; ABC transporter permease 1012457 2799293 LMOf2365_1001 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_013602.1 1011705 D 265669 CDS YP_013603.1 46907214 2799063 complement(1012491..1013966) 1 NC_002973.6 identified by match to protein family HMM PF00083; match to protein family HMM TIGR00711; EmrB/QacA family drug resistance transporter 1013966 2799063 LMOf2365_1002 Listeria monocytogenes serotype 4b str. F2365 EmrB/QacA family drug resistance transporter YP_013603.1 1012491 R 265669 CDS YP_013604.1 46907215 2798660 1014107..1015159 1 NC_002973.6 identified by similarity to GP:16413440; match to protein family HMM PF05343; hypothetical protein 1015159 2798660 LMOf2365_1003 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013604.1 1014107 D 265669 CDS YP_013605.1 46907216 2799035 1015172..1015651 1 NC_002973.6 identified by similarity to SP:O32770; match to protein family HMM PF00255; glutathione peroxidase 1015651 bsaA 2799035 bsaA Listeria monocytogenes serotype 4b str. F2365 glutathione peroxidase YP_013605.1 1015172 D 265669 CDS YP_013606.1 46907217 2799214 1015784..1016239 1 NC_002973.6 identified by similarity to OMNI:SP1915; match to protein family HMM PF04397; hypothetical protein 1016239 2799214 LMOf2365_1005 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013606.1 1015784 D 265669 CDS YP_013607.1 46907218 2799061 1016236..1016664 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0974; hypothetical protein 1016664 2799061 LMOf2365_1006 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013607.1 1016236 D 265669 CDS YP_013608.1 46907219 2799232 1016661..1017572 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1017572 2799232 LMOf2365_1007 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_013608.1 1016661 D 265669 CDS YP_013609.1 46907220 2799138 1018500..1020068 1 NC_002973.6 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 1020068 prfC 2799138 prfC Listeria monocytogenes serotype 4b str. F2365 peptide chain release factor 3 YP_013609.1 1018500 D 265669 CDS YP_013610.1 46907221 2799103 1020194..1020601 1 NC_002973.6 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1020601 2799103 LMOf2365_1010 Listeria monocytogenes serotype 4b str. F2365 MarR family transcriptional regulator YP_013610.1 1020194 D 265669 CDS YP_013611.1 46907222 2799236 1020654..1022015 1 NC_002973.6 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 1022015 2799236 LMOf2365_1011 Listeria monocytogenes serotype 4b str. F2365 MATE efflux family protein YP_013611.1 1020654 D 265669 CDS YP_013612.1 46907223 2799196 1022297..1023064 1 NC_002973.6 TerC family membrane protein 1023064 2799196 LMOf2365_1012 Listeria monocytogenes serotype 4b str. F2365 TerC family membrane protein YP_013612.1 1022297 D 265669 CDS YP_013613.1 46907224 2799193 1023167..1023934 1 NC_002973.6 identified by match to protein family HMM PF03741; TerC family membrane protein 1023934 2799193 LMOf2365_1013 Listeria monocytogenes serotype 4b str. F2365 TerC family membrane protein YP_013613.1 1023167 D 265669 CDS YP_013614.1 46907225 2799140 1023975..1025312 1 NC_002973.6 identified by match to protein family HMM PF02386; cation transport protein 1025312 2799140 LMOf2365_1014 Listeria monocytogenes serotype 4b str. F2365 cation transport protein YP_013614.1 1023975 D 265669 CDS YP_013615.1 46907226 2799162 complement(1025392..1025760) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0983; hypothetical protein 1025760 2799162 LMOf2365_1015 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013615.1 1025392 R 265669 CDS YP_013616.1 46907227 2799334 complement(1025790..1026821) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0984; match to protein family HMM PF01757; hypothetical protein 1026821 2799334 LMOf2365_1016 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013616.1 1025790 R 265669 CDS YP_013617.1 46907228 2799336 1027006..1027485 1 NC_002973.6 identified by similarity to SP:P11742; match to protein family HMM PF01035; match to protein family HMM TIGR00589; methylated-DNA--protein-cysteine methyltransferase 1027485 ogt-2 2799336 ogt-2 Listeria monocytogenes serotype 4b str. F2365 methylated-DNA--protein-cysteine methyltransferase YP_013617.1 1027006 D 265669 CDS YP_013618.1 46907229 2799337 complement(1027501..1029669) 1 NC_002973.6 identified by similarity to SP:Q9S5Z2; match to protein family HMM PF00004; match to protein family HMM PF02151; ATP-dependent Clp protease, ATP-binding subunit ClpE 1029669 2799337 LMOf2365_1018 Listeria monocytogenes serotype 4b str. F2365 ATP-dependent Clp protease, ATP-binding subunit ClpE YP_013618.1 1027501 R 265669 CDS YP_013619.1 46907230 2799335 complement(1029833..1030444) 1 NC_002973.6 identified by similarity to GP:16413456; match to protein family HMM PF02517; CAAX amino terminal protease 1030444 2799335 LMOf2365_1019 Listeria monocytogenes serotype 4b str. F2365 CAAX amino terminal protease YP_013619.1 1029833 R 265669 CDS YP_013620.1 46907231 2798619 1030590..1031381 1 NC_002973.6 identified by similarity to OMNI:NTL01MT01767; hypothetical protein 1031381 2798619 LMOf2365_1020 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013620.1 1030590 D 265669 CDS YP_013621.1 46907232 2798641 complement(1031382..1032854) 1 NC_002973.6 identified by similarity to SP:P54979; phytoene dehydrogenase 1032854 2798641 LMOf2365_1021 Listeria monocytogenes serotype 4b str. F2365 phytoene dehydrogenase YP_013621.1 1031382 R 265669 CDS YP_013622.1 46907233 2798434 complement(1032959..1033243) 1 NC_002973.6 identified by similarity to OMNI:SA1035; hypothetical protein 1033243 2798434 LMOf2365_1022 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013622.1 1032959 R 265669 CDS YP_013623.1 46907234 2799338 1033550..1033816 1 NC_002973.6 identified by similarity to SP:P07515; match to protein family HMM PF00381; match to protein family HMM TIGR01003; phosphocarrier protein HPr 1033816 ptsH 2799338 ptsH Listeria monocytogenes serotype 4b str. F2365 phosphocarrier protein HPr YP_013623.1 1033550 D 265669 CDS YP_013624.1 46907235 2798247 1033816..1035534 1 NC_002973.6 identified by similarity to SP:P08838; match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417; phosphoenolpyruvate-protein phosphotransferase 1035534 ptsI 2798247 ptsI Listeria monocytogenes serotype 4b str. F2365 phosphoenolpyruvate-protein phosphotransferase YP_013624.1 1033816 D 265669 CDS YP_013625.1 46907236 2799443 1035647..1036681 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0993; match to protein family HMM PF02698; hypothetical protein 1036681 2799443 LMOf2365_1025 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013625.1 1035647 D 265669 CDS YP_013626.1 46907237 2798048 1036694..1037554 1 NC_002973.6 identified by similarity to SP:O34948; match to protein family HMM PF03446; 3-hydroxyisobutyrate dehydrogenase 1037554 2798048 LMOf2365_1026 Listeria monocytogenes serotype 4b str. F2365 3-hydroxyisobutyrate dehydrogenase YP_013626.1 1036694 D 265669 CDS YP_013627.1 46907238 2797961 complement(1037593..1038738) 1 NC_002973.6 identified by similarity to GP:6318592; match to protein family HMM PF00155; aromatic amino acid aminotransferase 1038738 2797961 LMOf2365_1027 Listeria monocytogenes serotype 4b str. F2365 aromatic amino acid aminotransferase YP_013627.1 1037593 R 265669 CDS YP_013628.1 46907239 2798042 1038958..1039179 1 NC_002973.6 hypothetical protein 1039179 2798042 LMOf2365_1028 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013628.1 1038958 D 265669 CDS YP_013629.1 46907240 2797415 1039484..1039717 1 NC_002973.6 identified by similarity to OMNI:SP0822; hypothetical protein 1039717 2797415 LMOf2365_1029 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013629.1 1039484 D 265669 CDS YP_013630.1 46907241 2798901 1039919..1040371 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0998; match to protein family HMM PF00571; hypothetical protein 1040371 2798901 LMOf2365_1030 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013630.1 1039919 D 265669 CDS YP_013631.1 46907242 2798190 1040368..1041246 1 NC_002973.6 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 1041246 2798190 LMOf2365_1031 Listeria monocytogenes serotype 4b str. F2365 LysR family transcriptional regulator YP_013631.1 1040368 D 265669 CDS YP_013632.1 46907243 2799767 1041294..1042004 1 NC_002973.6 identified by match to protein family HMM PF00132; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 1042004 2799767 LMOf2365_1032 Listeria monocytogenes serotype 4b str. F2365 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_013632.1 1041294 D 265669 CDS YP_013633.1 46907244 2799064 1042068..1043183 1 NC_002973.6 identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891; M20/M25/M40 family peptidase 1043183 2799064 LMOf2365_1033 Listeria monocytogenes serotype 4b str. F2365 M20/M25/M40 family peptidase YP_013633.1 1042068 D 265669 CDS YP_013634.1 46907245 2799065 complement(1043227..1044072) 1 NC_002973.6 identified by similarity to OMNI:NTL01BH2669; match to protein family HMM PF00924; mechanosensitive ion channel family protein 1044072 2799065 LMOf2365_1034 Listeria monocytogenes serotype 4b str. F2365 mechanosensitive ion channel family protein YP_013634.1 1043227 R 265669 CDS YP_013635.1 46907246 2798404 1044444..1045637 1 NC_002973.6 identified by similarity to SP:P46920; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186; glycine betaine/L-proline ABC transporter ATP-binding protein 1045637 2798404 LMOf2365_1035 Listeria monocytogenes serotype 4b str. F2365 glycine betaine/L-proline ABC transporter ATP-binding protein YP_013635.1 1044444 D 265669 CDS YP_013636.1 46907247 2798405 1045630..1046478 1 NC_002973.6 identified by similarity to SP:P46921; match to protein family HMM PF00528; glycine betaine/L-proline ABC transporter permease 1046478 2798405 LMOf2365_1036 Listeria monocytogenes serotype 4b str. F2365 glycine betaine/L-proline ABC transporter permease YP_013636.1 1045630 D 265669 CDS YP_013637.1 46907248 2797160 1046492..1047394 1 NC_002973.6 identified by similarity to SP:P46922; match to protein family HMM PF04069; glycine betaine/L-proline ABC transporter substrate-binding protein 1047394 2797160 LMOf2365_1037 Listeria monocytogenes serotype 4b str. F2365 glycine betaine/L-proline ABC transporter substrate-binding protein YP_013637.1 1046492 D 265669 CDS YP_013638.1 46907249 2797537 1047509..1048000 1 NC_002973.6 identified by match to protein family HMM PF00358; match to protein family HMM TIGR00830; PTS system glucose-specific transporter subunit IIA 1048000 2797537 LMOf2365_1038 Listeria monocytogenes serotype 4b str. F2365 PTS system glucose-specific transporter subunit IIA YP_013638.1 1047509 D 265669 CDS YP_013639.1 46907250 2797224 1048112..1048807 1 NC_002973.6 identified by match to protein family HMM PF03932; cutC family protein 1048807 2797224 LMOf2365_1039 Listeria monocytogenes serotype 4b str. F2365 cutC family protein YP_013639.1 1048112 D 265669 CDS YP_013640.1 46907251 2797225 1048888..1049760 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1008; hypothetical protein 1049760 2797225 LMOf2365_1040 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013640.1 1048888 D 265669 CDS YP_013641.1 46907252 2799207 1049904..1050608 1 NC_002973.6 identified by similarity to GP:16413478; hypothetical protein 1050608 2799207 LMOf2365_1041 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013641.1 1049904 D 265669 CDS YP_013642.1 46907253 2799208 1050605..1051663 1 NC_002973.6 identified by match to protein family HMM PF02518; histidine kinase 1051663 2799208 LMOf2365_1042 Listeria monocytogenes serotype 4b str. F2365 histidine kinase YP_013642.1 1050605 D 265669 CDS YP_013643.1 46907254 2798634 1051660..1052298 1 NC_002973.6 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; DNA-binding response regulator 1052298 2798634 LMOf2365_1043 Listeria monocytogenes serotype 4b str. F2365 DNA-binding response regulator YP_013643.1 1051660 D 265669 CDS YP_013644.1 46907255 2798579 1052317..1052976 1 NC_002973.6 identified by match to protein family HMM PF02080; match to protein family HMM PF02254; TrkA domain-containing protein 1052976 2798579 LMOf2365_1044 Listeria monocytogenes serotype 4b str. F2365 TrkA domain-containing protein YP_013644.1 1052317 D 265669 CDS YP_013645.1 46907256 2798530 1053132..1054052 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1013; hypothetical protein 1054052 2798530 LMOf2365_1045 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013645.1 1053132 D 265669 CDS YP_013646.1 46907257 2798531 1054049..1054900 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1014; hypothetical protein 1054900 2798531 LMOf2365_1046 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013646.1 1054049 D 265669 CDS YP_013647.1 46907258 2799276 complement(1054941..1055906) 1 NC_002973.6 identified by similarity to SP:Q02115; match to protein family HMM PF03816; match to protein family HMM TIGR00350; transcriptional regulator 1055906 2799276 LMOf2365_1047 Listeria monocytogenes serotype 4b str. F2365 transcriptional regulator YP_013647.1 1054941 R 265669 CDS YP_013648.1 46907259 2799277 complement(1056015..1057682) 1 NC_002973.6 identified by match to protein family HMM PF00753; match to protein family HMM TIGR00649; metallo-beta-lactamase 1057682 2799277 LMOf2365_1048 Listeria monocytogenes serotype 4b str. F2365 metallo-beta-lactamase YP_013648.1 1056015 R 265669 CDS YP_013649.1 46907260 2798439 complement(1057689..1057898) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1017; hypothetical protein 1057898 2798439 LMOf2365_1049 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013649.1 1057689 R 265669 CDS YP_013650.1 46907261 2799313 1058382..1059152 1 NC_002973.6 identified by match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; cof family hydrolase 1059152 2799313 LMOf2365_1050 Listeria monocytogenes serotype 4b str. F2365 cof family hydrolase YP_013650.1 1058382 D 265669 CDS YP_013651.1 46907262 2799323 complement(1059200..1060228) 1 NC_002973.6 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 1060228 2799323 LMOf2365_1051 Listeria monocytogenes serotype 4b str. F2365 LacI family transcriptional regulator YP_013651.1 1059200 R 265669 CDS YP_013652.1 46907263 2799324 1060491..1061894 1 NC_002973.6 identified by similarity to OMNI:TM0951; hypothetical protein 1061894 2799324 LMOf2365_1052 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013652.1 1060491 D 265669 CDS YP_013653.1 46907264 2799166 1061910..1062734 1 NC_002973.6 identified by similarity to SP:Q58094; match to protein family HMM PF00456; transketolase 1062734 2799166 LMOf2365_1053 Listeria monocytogenes serotype 4b str. F2365 transketolase YP_013653.1 1061910 D 265669 CDS YP_013654.1 46907265 2799167 1062727..1063674 1 NC_002973.6 identified by match to protein family HMM PF02779; match to protein family HMM PF02780; transketolase, C-terminal subunit 1063674 2799167 LMOf2365_1054 Listeria monocytogenes serotype 4b str. F2365 transketolase, C-terminal subunit YP_013654.1 1062727 D 265669 CDS YP_013655.1 46907266 2798657 1063671..1065134 1 NC_002973.6 identified by similarity to SP:P08859; match to protein family HMM PF00370; match to protein family HMM PF02782; glycerol kinase 1065134 glpK-1 2798657 glpK-1 Listeria monocytogenes serotype 4b str. F2365 glycerol kinase YP_013655.1 1063671 D 265669 CDS YP_013656.1 46907267 2799121 1065131..1066987 1 NC_002973.6 identified by similarity to SP:P08722; match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR00830; PTS system beta-glucoside-specific transporter subunit IIABC 1066987 2799121 LMOf2365_1056 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIABC YP_013656.1 1065131 D 265669 CDS YP_013657.1 46907268 2797142 1067007..1068272 1 NC_002973.6 identified by similarity to OMNI:NTL01BMA0834; hypothetical protein 1068272 2797142 LMOf2365_1057 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013657.1 1067007 D 265669 CDS YP_013658.1 46907269 2797143 complement(1068333..1069136) 1 NC_002973.6 identified by match to protein family HMM PF05675; hypothetical protein 1069136 2797143 LMOf2365_1058 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013658.1 1068333 R 265669 CDS YP_013659.1 46907270 2797425 complement(1069204..1069785) 1 NC_002973.6 identified by similarity to SP:Q9K8I9; molybdopterin-guanine dinucleotide biosynthesis protein MobA 1069785 mobA 2797425 mobA Listeria monocytogenes serotype 4b str. F2365 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_013659.1 1069204 R 265669 CDS YP_013660.1 46907271 2797426 complement(1069766..1070428) 1 NC_002973.6 identified by similarity to SP:P37732; match to protein family HMM PF00005; molybdenum ABC transporter ATP-binding protein 1070428 modC 2797426 modC Listeria monocytogenes serotype 4b str. F2365 molybdenum ABC transporter ATP-binding protein YP_013660.1 1069766 R 265669 CDS YP_013661.1 46907272 2798555 complement(1070431..1071102) 1 NC_002973.6 identified by similarity to SP:P09834; match to protein family HMM PF00528; molybdenum ABC transporter permease 1071102 modB 2798555 modB Listeria monocytogenes serotype 4b str. F2365 molybdenum ABC transporter permease YP_013661.1 1070431 R 265669 CDS YP_013662.1 46907273 2798562 1071206..1071976 1 NC_002973.6 identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256; molybdenum ABC transporter molybdenum-binding protein 1071976 modA 2798562 modA Listeria monocytogenes serotype 4b str. F2365 molybdenum ABC transporter molybdenum-binding protein YP_013662.1 1071206 D 265669 CDS YP_013663.1 46907274 2798509 1072071..1073294 1 NC_002973.6 identified by similarity to SP:P12281; match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdopterin biosynthesis protein MoeA 1073294 moeA 2798509 moeA Listeria monocytogenes serotype 4b str. F2365 molybdopterin biosynthesis protein MoeA YP_013663.1 1072071 D 265669 CDS YP_013664.1 46907275 2798510 1073273..1073758 1 NC_002973.6 identified by similarity to SP:P44902; match to protein family HMM PF03205; match to protein family HMM TIGR00176; molybdopterin-guanine dinucleotide biosynthesis protein MobB 1073758 mobB 2798510 mobB Listeria monocytogenes serotype 4b str. F2365 molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_013664.1 1073273 D 265669 CDS YP_013665.1 46907276 2798462 1073755..1074177 1 NC_002973.6 identified by similarity to SP:O31705; match to protein family HMM PF02391; molybdenum cofactor biosynthesis protein E 1074177 moaE 2798462 moaE Listeria monocytogenes serotype 4b str. F2365 molybdenum cofactor biosynthesis protein E YP_013665.1 1073755 D 265669 CDS YP_013666.1 46907277 2798463 1074161..1074409 1 NC_002973.6 identified by similarity to SP:Q56209; match to protein family HMM TIGR01682; molybdenum cofactor biosynthesis protein D 1074409 moaD 2798463 moaD Listeria monocytogenes serotype 4b str. F2365 molybdenum cofactor biosynthesis protein D YP_013666.1 1074161 D 265669 CDS YP_013667.1 46907278 2799123 1074422..1074904 1 NC_002973.6 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 1074904 moaC 2799123 moaC Listeria monocytogenes serotype 4b str. F2365 molybdenum cofactor biosynthesis protein MoaC YP_013667.1 1074422 D 265669 CDS YP_013668.1 46907279 2797559 1074933..1075934 1 NC_002973.6 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 1075934 moaA 2797559 moaA Listeria monocytogenes serotype 4b str. F2365 molybdenum cofactor biosynthesis protein A YP_013668.1 1074933 D 265669 CDS YP_013669.1 46907280 2797916 complement(1075969..1076457) 1 NC_002973.6 identified by similarity to SP:P30746; match to protein family HMM PF00994; match to protein family HMM TIGR00177; molybdenum cofactor biosynthesis protein B 1076457 moaB 2797916 moaB Listeria monocytogenes serotype 4b str. F2365 molybdenum cofactor biosynthesis protein B YP_013669.1 1075969 R 265669 CDS YP_013670.1 46907281 2797917 complement(1076469..1077467) 1 NC_002973.6 identified by similarity to GP:13702076; match to protein family HMM PF00899; match to protein family HMM PF05237; molybdopterin biosynthesis protein MoeB 1077467 moeB 2797917 moeB Listeria monocytogenes serotype 4b str. F2365 molybdopterin biosynthesis protein MoeB YP_013670.1 1076469 R 265669 CDS YP_013671.1 46907282 2797500 1077599..1078153 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1032; hypothetical protein 1078153 2797500 LMOf2365_1071 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013671.1 1077599 D 265669 CDS YP_013672.1 46907283 2797501 complement(1078202..1078753) 1 NC_002973.6 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1078753 def 2797501 def Listeria monocytogenes serotype 4b str. F2365 peptide deformylase YP_013672.1 1078202 R 265669 CDS YP_013673.1 46907284 2799237 1079587..1080702 1 NC_002973.6 identified by similarity to GP:40041; match to protein family HMM PF00676; pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase subunit alpha 1080702 pdhA 2799237 pdhA Listeria monocytogenes serotype 4b str. F2365 pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase subunit alpha YP_013673.1 1079587 D 265669 CDS YP_013674.1 46907285 2797472 1080705..1081682 1 NC_002973.6 identified by similarity to SP:P21882; match to protein family HMM PF02779; match to protein family HMM PF02780; pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase subunit beta 1081682 pdhB 2797472 pdhB Listeria monocytogenes serotype 4b str. F2365 pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase subunit beta YP_013674.1 1080705 D 265669 CDS YP_013675.1 46907286 2799179 1081793..1083427 1 NC_002973.6 Catalyzes the transfer of acetyl from acetyldihydrolipoamide to coenzyme A to form acetyl CoA; dihydrolipoamide acetyltransferase 1083427 2799179 LMOf2365_1075 Listeria monocytogenes serotype 4b str. F2365 dihydrolipoamide acetyltransferase YP_013675.1 1081793 D 265669 CDS YP_013676.1 46907287 2799180 1083432..1084835 1 NC_002973.6 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1084835 2799180 LMOf2365_1076 Listeria monocytogenes serotype 4b str. F2365 dihydrolipoamide dehydrogenase YP_013676.1 1083432 D 265669 CDS YP_013677.1 46907288 2797443 1085022..1085333 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1038; hypothetical protein 1085333 2797443 LMOf2365_1077 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013677.1 1085022 D 265669 CDS YP_013678.1 46907289 2797444 1085462..1086415 1 NC_002973.6 identified by match to protein family HMM PF02866; lactate/malate dehydrogenase 1086415 2797444 LMOf2365_1078 Listeria monocytogenes serotype 4b str. F2365 lactate/malate dehydrogenase YP_013678.1 1085462 D 265669 CDS YP_013679.1 46907290 2797251 1086415..1086687 1 NC_002973.6 identified by similarity to OMNI:NTL01BS01465; match to protein family HMM PF05256; hypothetical protein 1086687 2797251 LMOf2365_1079 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013679.1 1086415 D 265669 CDS YP_013680.1 46907291 2797192 1086709..1087239 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1041; hypothetical protein 1087239 2797192 LMOf2365_1080 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013680.1 1086709 D 265669 CDS YP_013681.1 46907292 2799117 complement(1087297..1088241) 1 NC_002973.6 identified by match to protein family HMM PF01544; magnesium transporter CorA family protein 1088241 2799117 LMOf2365_1081 Listeria monocytogenes serotype 4b str. F2365 magnesium transporter CorA family protein YP_013681.1 1087297 R 265669 CDS YP_013682.1 46907293 2799118 complement(1088442..1089056) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1043; hypothetical protein 1089056 2799118 LMOf2365_1082 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013682.1 1088442 R 265669 CDS YP_013683.1 46907294 2799461 1089187..1089960 1 NC_002973.6 identified by match to protein family HMM PF00459; inositol monophosphatase 1089960 2799461 LMOf2365_1083 Listeria monocytogenes serotype 4b str. F2365 inositol monophosphatase YP_013683.1 1089187 D 265669 CDS YP_013684.1 46907295 2799462 1090152..1091990 1 NC_002973.6 identified by similarity to SP:O07631; match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA 1091990 typA 2799462 typA Listeria monocytogenes serotype 4b str. F2365 GTP-binding protein TypA YP_013684.1 1090152 D 265669 CDS YP_013685.1 46907296 2797139 1092168..1093043 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1046; hypothetical protein 1093043 2797139 LMOf2365_1085 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013685.1 1092168 D 265669 CDS YP_013686.1 46907297 2798481 complement(1093075..1093305) 1 NC_002973.6 identified by similarity to GP:16413516; hypothetical protein 1093305 2798481 LMOf2365_1086 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013686.1 1093075 R 265669 CDS YP_013687.1 46907298 2798577 1093511..1093792 1 NC_002973.6 depletion of this protein in Bacillus subtilis results in defects in cell morphology; crystal structure of Staphylococcus protein shows homodimer; ligand binding protein; hypothetical protein 1093792 2798577 LMOf2365_1087 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013687.1 1093511 D 265669 CDS YP_013688.1 46907299 2798578 1093968..1095176 1 NC_002973.6 identified by match to protein family HMM PF01098; cell cycle protein FtsW 1095176 2798578 LMOf2365_1088 Listeria monocytogenes serotype 4b str. F2365 cell cycle protein FtsW YP_013688.1 1093968 D 265669 CDS YP_013689.1 46907300 2798563 1095454..1098894 1 NC_002973.6 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 1098894 pyc 2798563 pyc Listeria monocytogenes serotype 4b str. F2365 pyruvate carboxylase YP_013689.1 1095454 D 265669 CDS YP_013690.1 46907301 2798564 1099048..1099941 1 NC_002973.6 identified by match to protein family HMM PF01497; ABC transporter substrate-binding protein 1099941 2798564 LMOf2365_1090 Listeria monocytogenes serotype 4b str. F2365 ABC transporter substrate-binding protein YP_013690.1 1099048 D 265669 CDS YP_013691.1 46907302 2798520 1100235..1101026 1 NC_002973.6 identified by similarity to SP:P42953; match to protein family HMM PF01061; techoic acid ABC transporter efflux permease 1101026 2798520 LMOf2365_1091 Listeria monocytogenes serotype 4b str. F2365 techoic acid ABC transporter efflux permease YP_013691.1 1100235 D 265669 CDS YP_013692.1 46907303 2798469 1101039..1102046 1 NC_002973.6 identified by similarity to SP:P42954; match to protein family HMM PF00005; techoic acid ABC transporter ATP-binding protein 1102046 2798469 LMOf2365_1092 Listeria monocytogenes serotype 4b str. F2365 techoic acid ABC transporter ATP-binding protein YP_013692.1 1101039 D 265669 CDS YP_013693.1 46907304 2799262 1102270..1104594 1 NC_002973.6 identified by match to protein family HMM PF01832; N-acetylmuramoyl-L-alanine amidase 1104594 2799262 LMOf2365_1093 Listeria monocytogenes serotype 4b str. F2365 N-acetylmuramoyl-L-alanine amidase YP_013693.1 1102270 D 265669 CDS YP_013694.1 46907305 2799263 complement(1104657..1106663) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1055; hypothetical protein 1106663 2799263 LMOf2365_1094 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013694.1 1104657 R 265669 CDS YP_013695.1 46907306 2799301 1106955..1107938 1 NC_002973.6 identified by match to protein family HMM PF00535; glycosyl transferase family protein 1107938 2799301 LMOf2365_1095 Listeria monocytogenes serotype 4b str. F2365 glycosyl transferase family protein YP_013695.1 1106955 D 265669 CDS YP_013696.1 46907307 2799302 1107950..1110052 1 NC_002973.6 hypothetical protein 1110052 2799302 LMOf2365_1096 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013696.1 1107950 D 265669 CDS YP_013697.1 46907308 2799091 1110083..1112407 1 NC_002973.6 identified by match to protein family HMM PF00535; match to protein family HMM PF04464; glycosyl transferase family protein 1112407 2799091 LMOf2365_1097 Listeria monocytogenes serotype 4b str. F2365 glycosyl transferase family protein YP_013697.1 1110083 D 265669 CDS YP_013698.1 46907309 2799272 1112404..1113414 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1059; hypothetical protein 1113414 2799272 LMOf2365_1098 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013698.1 1112404 D 265669 CDS YP_013699.1 46907310 2799327 complement(1113463..1114350) 1 NC_002973.6 identified by match to protein family HMM PF00483; match to protein family HMM TIGR01099; UTP-glucose-1-phosphate uridylyltransferase 1114350 galU 2799327 galU Listeria monocytogenes serotype 4b str. F2365 UTP-glucose-1-phosphate uridylyltransferase YP_013699.1 1113463 R 265669 CDS YP_013700.1 46907311 2799328 1114574..1115287 1 NC_002973.6 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1115287 ispD 2799328 ispD Listeria monocytogenes serotype 4b str. F2365 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_013700.1 1114574 D 265669 CDS YP_013701.1 46907312 2799286 1115280..1116305 1 NC_002973.6 identified by match to protein family HMM PF00107; zinc-dependent alcohol dehydrogenase 1116305 2799286 LMOf2365_1101 Listeria monocytogenes serotype 4b str. F2365 zinc-dependent alcohol dehydrogenase YP_013701.1 1115280 D 265669 CDS YP_013702.1 46907313 2799287 1116448..1117827 1 NC_002973.6 identified by match to protein family HMM PF00535; glycosyl transferase family protein 1117827 2799287 LMOf2365_1102 Listeria monocytogenes serotype 4b str. F2365 glycosyl transferase family protein YP_013702.1 1116448 D 265669 CDS YP_013703.1 46907314 2799297 1117827..1118981 1 NC_002973.6 identified by similarity to SP:P13485; match to protein family HMM PF04464; teichoic acid biosynthesis domain-containing protein 1118981 2799297 LMOf2365_1103 Listeria monocytogenes serotype 4b str. F2365 teichoic acid biosynthesis domain-containing protein YP_013703.1 1117827 D 265669 CDS YP_013704.1 46907315 2799024 1118994..1120145 1 NC_002973.6 identified by similarity to SP:P27621; match to protein family HMM PF04464; teichoic acid biosynthesis protein B 1120145 2799024 LMOf2365_1104 Listeria monocytogenes serotype 4b str. F2365 teichoic acid biosynthesis protein B YP_013704.1 1118994 D 265669 CDS YP_013705.1 46907316 2798430 1120210..1120593 1 NC_002973.6 identified by similarity to SP:P27623; match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR01518; glycerol-3-phosphate cytidylyltransferase 1120593 tagD 2798430 tagD Listeria monocytogenes serotype 4b str. F2365 glycerol-3-phosphate cytidylyltransferase YP_013705.1 1120210 D 265669 CDS YP_013706.1 46907317 2798431 1120711..1122201 1 NC_002973.6 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1122201 2798431 LMOf2365_1106 Listeria monocytogenes serotype 4b str. F2365 nicotinate phosphoribosyltransferase YP_013706.1 1120711 D 265669 CDS YP_013707.1 46907318 2798443 1122213..1123037 1 NC_002973.6 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1123037 nadE 2798443 nadE Listeria monocytogenes serotype 4b str. F2365 NAD synthetase YP_013707.1 1122213 D 265669 CDS YP_013708.1 46907319 2798444 1123050..1123358 1 NC_002973.6 identified by similarity to OMNI:CC1971; match to protein family HMM PF03992; hypothetical protein 1123358 2798444 LMOf2365_1108 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013708.1 1123050 D 265669 CDS YP_013709.1 46907320 2798450 1123418..1123822 1 NC_002973.6 identified by similarity to SP:P46318; match to protein family HMM PF02302; PTS system transporter subunit IIB 1123822 2798450 LMOf2365_1109 Listeria monocytogenes serotype 4b str. F2365 PTS system transporter subunit IIB YP_013709.1 1123418 D 265669 CDS YP_013710.1 46907321 2798486 1123963..1125507 1 NC_002973.6 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1125507 guaA 2798486 guaA Listeria monocytogenes serotype 4b str. F2365 GMP synthase YP_013710.1 1123963 D 265669 CDS YP_013711.1 46907322 2798500 1125798..1126154 1 NC_002973.6 identified by similarity to OMNI:NTL01BH3224; hypothetical protein 1126154 2798500 LMOf2365_1111 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013711.1 1125798 D 265669 CDS YP_013712.1 46907323 2798501 complement(1126762..1126887) 1 NC_002973.6 hypothetical protein 1126887 2798501 LMOf2365_1112 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013712.1 1126762 R 265669 CDS YP_013713.1 46907324 2798521 1126911..1127798 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1127798 2798521 LMOf2365_1113 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_013713.1 1126911 D 265669 CDS YP_013714.1 46907325 2798522 1127798..1128547 1 NC_002973.6 ABC transporter permease 1128547 2798522 LMOf2365_1114 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_013714.1 1127798 D 265669 CDS YP_013715.1 46907326 2798552 1128588..1128905 1 NC_002973.6 hypothetical protein 1128905 2798552 LMOf2365_1115 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013715.1 1128588 D 265669 CDS YP_013716.1 46907327 2798547 1128902..1129777 1 NC_002973.6 hypothetical protein 1129777 2798547 LMOf2365_1116 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013716.1 1128902 D 265669 CDS YP_013717.1 46907328 2798592 1129785..1130702 1 NC_002973.6 hypothetical protein 1130702 2798592 LMOf2365_1117 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013717.1 1129785 D 265669 CDS YP_013718.1 46907329 2798593 1130695..1132008 1 NC_002973.6 identified by similarity to GP:19747978; hypothetical protein 1132008 2798593 LMOf2365_1118 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013718.1 1130695 D 265669 CDS YP_013719.1 46907330 2798646 1132001..1132588 1 NC_002973.6 identified by match to protein family HMM PF02517; CAAX amino terminal protease 1132588 2798646 LMOf2365_1119 Listeria monocytogenes serotype 4b str. F2365 CAAX amino terminal protease YP_013719.1 1132001 D 265669 CDS YP_013720.1 46907331 2798647 1132833..1133606 1 NC_002973.6 identified by match to protein family HMM PF00165; AraC family transcriptional regulator 1133606 2798647 LMOf2365_1120 Listeria monocytogenes serotype 4b str. F2365 AraC family transcriptional regulator YP_013720.1 1132833 D 265669 CDS YP_013721.1 46907332 2799135 1133671..1134027 1 NC_002973.6 identified by match to protein family HMM PF00903; glyoxalase 1134027 2799135 LMOf2365_1121 Listeria monocytogenes serotype 4b str. F2365 glyoxalase YP_013721.1 1133671 D 265669 CDS YP_013722.1 46907333 2797123 complement(1134444..1134779) 1 NC_002973.6 hypothetical protein 1134779 2797123 LMOf2365_1122 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013722.1 1134444 R 265669 CDS YP_013723.1 46907334 2797154 complement(1134754..1135566) 1 NC_002973.6 hypothetical protein 1135566 2797154 LMOf2365_1123 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013723.1 1134754 R 265669 CDS YP_013724.1 46907335 2799159 1136256..1136606 1 NC_002973.6 identified by similarity to GP:16413544; hypothetical protein 1136606 2799159 LMOf2365_1125 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013724.1 1136256 D 265669 CDS YP_013725.1 46907336 2797207 1136609..1136749 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1076; hypothetical protein 1136749 2797207 LMOf2365_1126 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013725.1 1136609 D 265669 CDS YP_013726.1 46907337 2797208 1136761..1137129 1 NC_002973.6 hypothetical protein 1137129 2797208 LMOf2365_1127 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013726.1 1136761 D 265669 CDS YP_013727.1 46907338 2797231 1137166..1137585 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1077; hypothetical protein 1137585 2797231 LMOf2365_1128 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013727.1 1137166 D 265669 CDS YP_013728.1 46907339 2797232 1137671..1138144 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1078; hypothetical protein 1138144 2797232 LMOf2365_1129 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013728.1 1137671 D 265669 CDS YP_013729.1 46907340 2797468 1138134..1138571 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1079; hypothetical protein 1138571 2797468 LMOf2365_1130 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013729.1 1138134 D 265669 CDS YP_013730.1 46907341 2797437 1138975..1139313 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1080; hypothetical protein 1139313 2797437 LMOf2365_1131 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013730.1 1138975 D 265669 CDS YP_013731.1 46907342 2797238 1139331..1139774 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1082; match to protein family HMM PF00583; acetyltransferase 1139774 2797238 LMOf2365_1132 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_013731.1 1139331 D 265669 CDS YP_013732.1 46907343 2797239 1139774..1140229 1 NC_002973.6 identified by similarity to OMNI:EF0116; hypothetical protein 1140229 2797239 LMOf2365_1133 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013732.1 1139774 D 265669 CDS YP_013733.1 46907344 2797259 complement(1140243..1141241) 1 NC_002973.6 identified by similarity to GP:19916933; hypothetical protein 1141241 2797259 LMOf2365_1134 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013733.1 1140243 R 265669 CDS YP_013734.1 46907345 2797260 complement(1141238..1141834) 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 1141834 2797260 LMOf2365_1135 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_013734.1 1141238 R 265669 CDS YP_013735.1 46907346 2797201 complement(1141831..1142550) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1086; match to protein family HMM PF00376; hypothetical protein 1142550 2797201 LMOf2365_1136 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013735.1 1141831 R 265669 CDS YP_013736.1 46907347 2797455 1142801..1144516 1 NC_002973.6 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 1144516 2797455 LMOf2365_1137 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein/permease YP_013736.1 1142801 D 265669 CDS YP_013737.1 46907348 2797507 1144518..1146164 1 NC_002973.6 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 1146164 2797507 LMOf2365_1138 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein/permease YP_013737.1 1144518 D 265669 CDS YP_013738.1 46907349 2797508 complement(1146203..1146511) 1 NC_002973.6 identified by similarity to OMNI:NTL01BS01198; hypothetical protein 1146511 2797508 LMOf2365_1139 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013738.1 1146203 R 265669 CDS YP_013739.1 46907350 2797131 1146579..1146926 1 NC_002973.6 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 1146926 2797131 LMOf2365_1140 Listeria monocytogenes serotype 4b str. F2365 MerR family transcriptional regulator YP_013739.1 1146579 D 265669 CDS YP_013740.1 46907351 2797132 1146951..1148090 1 NC_002973.6 hypothetical protein 1148090 2797132 LMOf2365_1141 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013740.1 1146951 D 265669 CDS YP_013741.1 46907352 2797516 1148209..1148679 1 NC_002973.6 identified by similarity to GP:19068992; hypothetical protein 1148679 2797516 LMOf2365_1142 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013741.1 1148209 D 265669 CDS YP_013742.1 46907353 2797149 1148676..1148966 1 NC_002973.6 hypothetical protein 1148966 2797149 LMOf2365_1143 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013742.1 1148676 D 265669 CDS YP_013743.1 46907354 2797620 1149246..1150781 1 NC_002973.6 identified by match to protein family HMM PF00560; match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein 1150781 2797620 LMOf2365_1144 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_013743.1 1149246 D 265669 CDS YP_013744.1 46907355 2797621 complement(1150816..1151163) 1 NC_002973.6 identified by similarity to GP:15025581; hypothetical protein 1151163 2797621 LMOf2365_1145 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013744.1 1150816 R 265669 CDS YP_013745.1 46907356 2799733 complement(1151228..1151800) 1 NC_002973.6 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1151800 clpP-1 2799733 clpP-1 Listeria monocytogenes serotype 4b str. F2365 ATP-dependent Clp protease proteolytic subunit YP_013745.1 1151228 R 265669 CDS YP_013746.1 46907357 2799734 complement(1151931..1152338) 1 NC_002973.6 identified by similarity to OMNI:SA1219; hypothetical protein 1152338 2799734 LMOf2365_1147 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013746.1 1151931 R 265669 CDS YP_013747.1 46907358 2797268 1152430..1152909 1 NC_002973.6 identified by similarity to GP:3172404; siroheme synthase 1152909 2797268 LMOf2365_1148 Listeria monocytogenes serotype 4b str. F2365 siroheme synthase YP_013747.1 1152430 D 265669 CDS YP_013748.1 46907359 2797528 1153028..1154392 1 NC_002973.6 identified by similarity to OMNI:NTL01ST2050; match to protein family HMM PF00037; match to protein family HMM PF01512; PduS protein 1154392 2797528 LMOf2365_1149 Listeria monocytogenes serotype 4b str. F2365 PduS protein YP_013748.1 1153028 D 265669 CDS YP_013749.1 46907360 2797545 1154389..1154943 1 NC_002973.6 identified by similarity to OMNI:NTL01ST2051; match to protein family HMM PF00936; PduT protein 1154943 2797545 LMOf2365_1150 Listeria monocytogenes serotype 4b str. F2365 PduT protein YP_013749.1 1154389 D 265669 CDS YP_013750.1 46907361 2797546 1155091..1155441 1 NC_002973.6 identified by similarity to SP:Q9XDM7; match to protein family HMM PF06132; propanediol utilization protein PduU 1155441 pduU 2797546 pduU Listeria monocytogenes serotype 4b str. F2365 propanediol utilization protein PduU YP_013750.1 1155091 D 265669 CDS YP_013751.1 46907362 2797797 1155447..1155878 1 NC_002973.6 identified by similarity to SP:Q9XDM6; propanediol utilization protein PduV 1155878 2797797 LMOf2365_1152 Listeria monocytogenes serotype 4b str. F2365 propanediol utilization protein PduV YP_013751.1 1155447 D 265669 CDS YP_013752.1 46907363 2797798 1155903..1156646 1 NC_002973.6 identified by similarity to GP:10173468; hypothetical protein 1156646 2797798 LMOf2365_1153 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013752.1 1155903 D 265669 CDS YP_013753.1 46907364 2798167 1156651..1157196 1 NC_002973.6 identified by match to protein family HMM PF02283; cobinamide kinase/cobinamide phosphate guanylyltransferase 1157196 cobU 2798167 cobU Listeria monocytogenes serotype 4b str. F2365 cobinamide kinase/cobinamide phosphate guanylyltransferase YP_013753.1 1156651 D 265669 CDS YP_013754.1 46907365 2797186 1157198..1157944 1 NC_002973.6 identified by match to protein family HMM PF02654; match to protein family HMM TIGR00317; cobalamin 5'-phosphate synthase 1157944 cobS 2797186 cobS Listeria monocytogenes serotype 4b str. F2365 cobalamin 5'-phosphate synthase YP_013754.1 1157198 D 265669 CDS YP_013755.1 46907366 2798666 1157945..1158520 1 NC_002973.6 identified by similarity to SP:P52086; match to protein family HMM PF00300; alpha-ribazole-5'-phosphate phosphatase 1158520 cobC 2798666 cobC Listeria monocytogenes serotype 4b str. F2365 alpha-ribazole-5'-phosphate phosphatase YP_013755.1 1157945 D 265669 CDS YP_013756.1 46907367 2798667 complement(1158930..1159814) 1 NC_002973.6 identified by similarity to SP:Q05587; match to protein family HMM PF00165; PocR family transcriptional regulator 1159814 2798667 LMOf2365_1157 Listeria monocytogenes serotype 4b str. F2365 PocR family transcriptional regulator YP_013756.1 1158930 R 265669 CDS YP_013757.1 46907368 2798620 complement(1159883..1160050) 1 NC_002973.6 hypothetical protein 1160050 2798620 LMOf2365_1158 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013757.1 1159883 R 265669 CDS YP_013758.1 46907369 2798621 1160117..1160404 1 NC_002973.6 identified by similarity to SP:P37448; match to protein family HMM PF00936; propanediol utilization protein PduA 1160404 pduA 2798621 pduA Listeria monocytogenes serotype 4b str. F2365 propanediol utilization protein PduA YP_013758.1 1160117 D 265669 CDS YP_013759.1 46907370 2798389 1160499..1161200 1 NC_002973.6 identified by similarity to SP:P37449; match to protein family HMM PF06000; propanediol utilization protein PduB 1161200 pduB 2798389 pduB Listeria monocytogenes serotype 4b str. F2365 propanediol utilization protein PduB YP_013759.1 1160499 D 265669 CDS YP_013760.1 46907371 2798599 1161219..1162883 1 NC_002973.6 identified by similarity to SP:P37450; match to protein family HMM PF02286; glycerol dehydratase large subunit 1162883 pduC 2798599 pduC Listeria monocytogenes serotype 4b str. F2365 glycerol dehydratase large subunit YP_013760.1 1161219 D 265669 CDS YP_013761.1 46907372 2799037 1162921..1163580 1 NC_002973.6 identified by similarity to OMNI:NTL01ST2038; match to protein family HMM PF02288; propanediol utilization: dehydratase, medium subunit 1163580 pduD 2799037 pduD Listeria monocytogenes serotype 4b str. F2365 propanediol utilization: dehydratase, medium subunit YP_013761.1 1162921 D 265669 CDS YP_013762.1 46907373 2799038 1163597..1164109 1 NC_002973.6 identified by similarity to OMNI:NTL01ST2039; match to protein family HMM PF02287; propanediol utilization dehydratase small subunit 1164109 pduE 2799038 pduE Listeria monocytogenes serotype 4b str. F2365 propanediol utilization dehydratase small subunit YP_013762.1 1163597 D 265669 CDS YP_013763.1 46907374 2799546 1164155..1165975 1 NC_002973.6 identified by similarity to OMNI:NTL01ST2040; propanediol utilization diol dehydratase reactivation protein 1165975 pduG 2799546 pduG Listeria monocytogenes serotype 4b str. F2365 propanediol utilization diol dehydratase reactivation protein YP_013763.1 1164155 D 265669 CDS YP_013764.1 46907375 2799547 1165972..1166319 1 NC_002973.6 identified by similarity to GP:5069452; PduH protein 1166319 2799547 LMOf2365_1165 Listeria monocytogenes serotype 4b str. F2365 PduH protein YP_013764.1 1165972 D 265669 CDS YP_013765.1 46907376 2797577 1166332..1166769 1 NC_002973.6 identified by similarity to GP:16503277; match to protein family HMM PF00936; propanediol utilization protein PduK 1166769 2797577 LMOf2365_1166 Listeria monocytogenes serotype 4b str. F2365 propanediol utilization protein PduK YP_013765.1 1166332 D 265669 CDS YP_013766.1 46907377 2798414 1166794..1167069 1 NC_002973.6 identified by similarity to OMNI:NTL01ST2042; match to protein family HMM PF00936; propanediol utilization protein PduJ 1167069 2798414 LMOf2365_1167 Listeria monocytogenes serotype 4b str. F2365 propanediol utilization protein PduJ YP_013766.1 1166794 D 265669 CDS YP_013767.1 46907378 2798428 1167073..1167708 1 NC_002973.6 identified by similarity to OMNI:NTL01ST2044; match to protein family HMM PF06130; propanediol utilization protein PduL 1167708 2798428 LMOf2365_1168 Listeria monocytogenes serotype 4b str. F2365 propanediol utilization protein PduL YP_013767.1 1167073 D 265669 CDS YP_013768.1 46907379 2798429 1167729..1168568 1 NC_002973.6 identified by similarity to SP:P41794; ethanolamine utilization protein 1168568 eutJ 2798429 eutJ Listeria monocytogenes serotype 4b str. F2365 ethanolamine utilization protein YP_013768.1 1167729 D 265669 CDS YP_013769.1 46907380 2798423 1168565..1169044 1 NC_002973.6 identified by similarity to OMNI:NTL01ST2045; propanediol utilization protein PduM 1169044 pduM 2798423 pduM Listeria monocytogenes serotype 4b str. F2365 propanediol utilization protein PduM YP_013769.1 1168565 D 265669 CDS YP_013770.1 46907381 2798424 1169049..1169312 1 NC_002973.6 identified by similarity to OMNI:NTL01ST2046; match to protein family HMM PF03319; propanediol utilization polyhedral bodies protein 1169312 pduN 2798424 pduN Listeria monocytogenes serotype 4b str. F2365 propanediol utilization polyhedral bodies protein YP_013770.1 1169049 D 265669 CDS YP_013771.1 46907382 2798411 1169327..1170322 1 NC_002973.6 identified by similarity to OMNI:NTL01ST2047; match to protein family HMM PF01923; match to protein family HMM PF03928; match to protein family HMM TIGR00636; PduO protein 1170322 2798411 LMOf2365_1172 Listeria monocytogenes serotype 4b str. F2365 PduO protein YP_013771.1 1169327 D 265669 CDS YP_013772.1 46907383 2798335 1170329..1171738 1 NC_002973.6 identified by similarity to OMNI:NTL01ST2048; match to protein family HMM PF00171; CoA-dependent propionaldehyde dehydrogenase 1171738 pduP 2798335 pduP Listeria monocytogenes serotype 4b str. F2365 CoA-dependent propionaldehyde dehydrogenase YP_013772.1 1170329 D 265669 CDS YP_013773.1 46907384 2798384 1171754..1172872 1 NC_002973.6 identified by similarity to OMNI:NTL01ST2049; match to protein family HMM PF00465; propanol dehydrogenase 1172872 pduQ 2798384 pduQ Listeria monocytogenes serotype 4b str. F2365 propanol dehydrogenase YP_013773.1 1171754 D 265669 CDS YP_013774.1 46907385 2798385 1172900..1173604 1 NC_002973.6 identified by similarity to SP:P18156; match to protein family HMM PF00230; match to protein family HMM TIGR00861; glycerol uptake facilitator protein 1173604 glpF-1 2798385 glpF-1 Listeria monocytogenes serotype 4b str. F2365 glycerol uptake facilitator protein YP_013774.1 1172900 D 265669 CDS YP_013775.1 46907386 2798341 1173670..1174863 1 NC_002973.6 identified by similarity to SP:P74879; match to protein family HMM PF00871; match to protein family HMM TIGR00016; propionate/acetate kinase 1174863 2798341 LMOf2365_1176 Listeria monocytogenes serotype 4b str. F2365 propionate/acetate kinase YP_013775.1 1173670 D 265669 CDS YP_013776.1 46907387 2798342 1174877..1175962 1 NC_002973.6 cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; threonine-phosphate decarboxylase 1175962 2798342 LMOf2365_1177 Listeria monocytogenes serotype 4b str. F2365 threonine-phosphate decarboxylase YP_013776.1 1174877 D 265669 CDS YP_013777.1 46907388 2798348 1175952..1176827 1 NC_002973.6 identified by similarity to OMNI:NTL01ST2055; match to protein family HMM PF00288; propanediol utilization protein PduX 1176827 2798348 LMOf2365_1178 Listeria monocytogenes serotype 4b str. F2365 propanediol utilization protein PduX YP_013777.1 1175952 D 265669 CDS YP_013778.1 46907389 2798358 complement(1176851..1176961) 1 NC_002973.6 hypothetical protein 1176961 2798358 LMOf2365_1179 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013778.1 1176851 R 265669 CDS YP_013779.1 46907390 2798321 complement(1176998..1177093) 1 NC_002973.6 hypothetical protein 1177093 2798321 LMOf2365_1180 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013779.1 1176998 R 265669 CDS YP_013780.1 46907391 2798322 1177417..1178556 1 NC_002973.6 identified by match to protein family HMM PF00465; alcohol dehydrogenase, iron-dependent 1178556 2798322 LMOf2365_1181 Listeria monocytogenes serotype 4b str. F2365 alcohol dehydrogenase, iron-dependent YP_013780.1 1177417 D 265669 CDS YP_013781.1 46907392 2798181 1178840..1179412 1 NC_002973.6 identified by match to protein family HMM PF00072; match to protein family HMM PF03861; transcription antiterminator response regulator 1179412 2798181 LMOf2365_1182 Listeria monocytogenes serotype 4b str. F2365 transcription antiterminator response regulator YP_013781.1 1178840 D 265669 CDS YP_013782.1 46907393 2798182 1179405..1180862 1 NC_002973.6 identified by match to protein family HMM PF02518; sensor histidine kinase 1180862 2798182 LMOf2365_1183 Listeria monocytogenes serotype 4b str. F2365 sensor histidine kinase YP_013782.1 1179405 D 265669 CDS YP_013783.1 46907394 2798201 1180952..1182373 1 NC_002973.6 ethanolamine utilization protein EutA; reactivating factor for ethanolamine ammonia lyase 1182373 eutA 2798201 eutA Listeria monocytogenes serotype 4b str. F2365 reactivating factor for ethanolamine ammonia lyase YP_013783.1 1180952 D 265669 CDS YP_013784.1 46907395 2798325 1182415..1183779 1 NC_002973.6 identified by similarity to SP:P19635; ethanolamine ammonia-lyase heavy chain 1183779 eutB 2798325 eutB Listeria monocytogenes serotype 4b str. F2365 ethanolamine ammonia-lyase heavy chain YP_013784.1 1182415 D 265669 CDS YP_013785.1 46907396 2799020 1183799..1184680 1 NC_002973.6 catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit 1184680 eutC 2799020 eutC Listeria monocytogenes serotype 4b str. F2365 ethanolamine ammonia-lyase small subunit YP_013785.1 1183799 D 265669 CDS YP_013786.1 46907397 2799021 1184703..1185356 1 NC_002973.6 identified by similarity to SP:Q9ZFU9; match to protein family HMM PF06000; ethanolamine utilization protein 1185356 eutL 2799021 eutL Listeria monocytogenes serotype 4b str. F2365 ethanolamine utilization protein YP_013786.1 1184703 D 265669 CDS YP_013787.1 46907398 2799042 1185371..1185892 1 NC_002973.6 identified by similarity to SP:P77606; match to protein family HMM PF00936; ethanolamine utilization protein 1185892 2799042 LMOf2365_1188 Listeria monocytogenes serotype 4b str. F2365 ethanolamine utilization protein YP_013787.1 1185371 D 265669 CDS YP_013788.1 46907399 2799043 1185892..1187352 1 NC_002973.6 identified by match to protein family HMM PF00171; aldehyde dehydrogenase 1187352 2799043 LMOf2365_1189 Listeria monocytogenes serotype 4b str. F2365 aldehyde dehydrogenase YP_013788.1 1185892 D 265669 CDS YP_013789.1 46907400 2798611 1187384..1187668 1 NC_002973.6 identified by similarity to SP:P41791; match to protein family HMM PF00936; ethanolamine utilization protein 1187668 2798611 LMOf2365_1190 Listeria monocytogenes serotype 4b str. F2365 ethanolamine utilization protein YP_013789.1 1187384 D 265669 CDS YP_013790.1 46907401 2799047 1187834..1188589 1 NC_002973.6 identified by similarity to GP:18144564; match to protein family HMM PF01923; hypothetical protein 1188589 2799047 LMOf2365_1191 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013790.1 1187834 D 265669 CDS YP_013791.1 46907402 2798222 1188602..1189243 1 NC_002973.6 identified by similarity to GP:18144565; match to protein family HMM PF06130; hypothetical protein 1189243 2798222 LMOf2365_1192 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013791.1 1188602 D 265669 CDS YP_013792.1 46907403 2798223 1189246..1189812 1 NC_002973.6 identified by similarity to GP:18144566; hypothetical protein 1189812 2798223 LMOf2365_1193 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013792.1 1189246 D 265669 CDS YP_013793.1 46907404 2797923 1189827..1190096 1 NC_002973.6 identified by similarity to SP:P77633; match to protein family HMM PF03319; carboxysome protein 1190096 2797923 LMOf2365_1194 Listeria monocytogenes serotype 4b str. F2365 carboxysome protein YP_013793.1 1189827 D 265669 CDS YP_013794.1 46907405 2797924 1190089..1190634 1 NC_002973.6 identified by similarity to GP:18144568; hypothetical protein 1190634 2797924 LMOf2365_1195 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013794.1 1190089 D 265669 CDS YP_013795.1 46907406 2799450 1190650..1191771 1 NC_002973.6 identified by similarity to SP:P76552; match to protein family HMM PF04346; hypothetical protein 1191771 2799450 LMOf2365_1196 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013795.1 1190650 D 265669 CDS YP_013796.1 46907407 2798258 1191764..1192207 1 NC_002973.6 identified by similarity to GP:18144570; match to protein family HMM PF06249; hypothetical protein 1192207 2798258 LMOf2365_1197 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013796.1 1191764 D 265669 CDS YP_013797.1 46907408 2798986 complement(1192249..1192764) 1 NC_002973.6 identified by match to protein family HMM PF00165; AraC family transcriptional regulator 1192764 2798986 LMOf2365_1198 Listeria monocytogenes serotype 4b str. F2365 AraC family transcriptional regulator YP_013797.1 1192249 R 265669 CDS YP_013798.1 46907409 2798987 1193114..1193608 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1143; hypothetical protein 1193608 2798987 LMOf2365_1199 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013798.1 1193114 D 265669 CDS YP_013799.1 46907410 2798905 1193941..1195299 1 NC_002973.6 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 1195299 cobB 2798905 cobB Listeria monocytogenes serotype 4b str. F2365 cobyrinic acid a,c-diamide synthase YP_013799.1 1193941 D 265669 CDS YP_013800.1 46907411 2798906 1195296..1196243 1 NC_002973.6 CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 1196243 cobD 2798906 cobD Listeria monocytogenes serotype 4b str. F2365 cobalamin biosynthesis protein YP_013800.1 1195296 D 265669 CDS YP_013801.1 46907412 2798875 1196256..1196888 1 NC_002973.6 catalyzes the interconversion of cobalt-precorrin-8X and cobyrinic acid in the anaerobic biosynthesis of cobalamin; cobalt-precorrin-8X methylmutase 1196888 cbiC 2798875 cbiC Listeria monocytogenes serotype 4b str. F2365 cobalt-precorrin-8X methylmutase YP_013801.1 1196256 D 265669 CDS YP_013802.1 46907413 2798955 1196904..1198025 1 NC_002973.6 Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 1198025 cbiD 2798955 cbiD Listeria monocytogenes serotype 4b str. F2365 cobalt-precorrin-6A synthase YP_013802.1 1196904 D 265669 CDS YP_013803.1 46907414 2799669 1198022..1198618 1 NC_002973.6 catalyzes the methylation of C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W-a; cobalt-precorrin-6Y C(5)-methyltransferase 1198618 cbiE 2799669 cbiE Listeria monocytogenes serotype 4b str. F2365 cobalt-precorrin-6Y C(5)-methyltransferase YP_013803.1 1198022 D 265669 CDS YP_013804.1 46907415 2799787 1198608..1199177 1 NC_002973.6 catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W; decarboxylating; cobalt-precorrin-6Y C(15)-methyltransferase 1199177 cbiT 2799787 cbiT Listeria monocytogenes serotype 4b str. F2365 cobalt-precorrin-6Y C(15)-methyltransferase YP_013804.1 1198608 D 265669 CDS YP_013805.1 46907416 2797575 1199183..1199932 1 NC_002973.6 identified by match to protein family HMM PF00590; match to protein family HMM TIGR01465; precorrin-4 C(11)-methyltransferase 1199932 cobM 2797575 cobM Listeria monocytogenes serotype 4b str. F2365 precorrin-4 C(11)-methyltransferase YP_013805.1 1199183 D 265669 CDS YP_013806.1 46907417 2798418 1199919..1200950 1 NC_002973.6 catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3; cobalamin biosynthesis protein CbiG 1200950 cbiG 2798418 cbiG Listeria monocytogenes serotype 4b str. F2365 cobalamin biosynthesis protein CbiG YP_013806.1 1199919 D 265669 CDS YP_013807.1 46907418 2799794 1200947..1201672 1 NC_002973.6 catalyzes the formation of precorrin-4 from precorrin-3B and S-adenosyl-L-methionine; precorrin-3B C(17)-methyltransferase 1201672 cobJ 2799794 cobJ Listeria monocytogenes serotype 4b str. F2365 precorrin-3B C(17)-methyltransferase YP_013807.1 1200947 D 265669 CDS YP_013808.1 46907419 2797950 1201669..1202421 1 NC_002973.6 identified by match to protein family HMM PF02571; match to protein family HMM TIGR00715; precorrin-6X reductase 1202421 cobK 2797950 cobK Listeria monocytogenes serotype 4b str. F2365 precorrin-6X reductase YP_013808.1 1201669 D 265669 CDS YP_013809.1 46907420 2799845 1202421..1203902 1 NC_002973.6 identified by similarity to SP:Q59294; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01469; uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase 1203902 2799845 LMOf2365_1210 Listeria monocytogenes serotype 4b str. F2365 uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase YP_013809.1 1202421 D 265669 CDS YP_013810.1 46907421 2799846 1203899..1204684 1 NC_002973.6 identified by similarity to SP:Q05592; match to protein family HMM PF06180; cobalt chelatase 1204684 cbiK 2799846 cbiK Listeria monocytogenes serotype 4b str. F2365 cobalt chelatase YP_013810.1 1203899 D 265669 CDS YP_013811.1 46907422 2797629 1204677..1205387 1 NC_002973.6 catalyzes the formation of precorrin-3A from precorrin-2; cobalt-precorrin-2 C(20)-methyltransferase 1205387 cobI 2797629 cobI Listeria monocytogenes serotype 4b str. F2365 cobalt-precorrin-2 C(20)-methyltransferase YP_013811.1 1204677 D 265669 CDS YP_013812.2 161611351 2799742 1205468..1206118 1 NC_002973.6 catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM 1206118 cbiM 2799742 cbiM Listeria monocytogenes serotype 4b str. F2365 cobalt transport protein CbiM YP_013812.2 1205468 D 265669 CDS YP_013813.1 46907424 2798165 1206115..1206411 1 NC_002973.6 periplasmic cobalt binding component of the cobalt transport system; cobalt transport protein CbiN 1206411 2798165 LMOf2365_1214 Listeria monocytogenes serotype 4b str. F2365 cobalt transport protein CbiN YP_013813.1 1206115 D 265669 CDS YP_013814.1 46907425 2799888 1206398..1207075 1 NC_002973.6 identified by similarity to SP:Q05598; match to protein family HMM PF02361; cobalt transport protein CbiQ 1207075 cbiQ 2799888 cbiQ Listeria monocytogenes serotype 4b str. F2365 cobalt transport protein CbiQ YP_013814.1 1206398 D 265669 CDS YP_013815.1 46907426 2799681 1207088..1207894 1 NC_002973.6 identified by similarity to SP:Q05596; match to protein family HMM PF00005; match to protein family HMM TIGR01166; cobalt ABC transporter ATP-binding protein 1207894 2799681 LMOf2365_1216 Listeria monocytogenes serotype 4b str. F2365 cobalt ABC transporter ATP-binding protein YP_013815.1 1207088 D 265669 CDS YP_013816.1 46907427 2799682 1207894..1209429 1 NC_002973.6 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 1209429 cobQ 2799682 cobQ Listeria monocytogenes serotype 4b str. F2365 cobyric acid synthase YP_013816.1 1207894 D 265669 CDS YP_013817.1 46907428 2799857 1209393..1209959 1 NC_002973.6 identified by match to protein family HMM PF01923; match to protein family HMM TIGR00636; ATP:cob(I)alamin adenosyltransferase 1209959 2799857 LMOf2365_1218 Listeria monocytogenes serotype 4b str. F2365 ATP:cob(I)alamin adenosyltransferase YP_013817.1 1209393 D 265669 CDS YP_013818.1 46907429 2797814 complement(1210004..1210471) 1 NC_002973.6 identified by match to protein family HMM PF04657; hypothetical protein 1210471 2797814 LMOf2365_1219 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013818.1 1210004 R 265669 CDS YP_013819.1 46907430 2797815 complement(1210486..1210935) 1 NC_002973.6 identified by match to protein family HMM PF04657; hypothetical protein 1210935 2797815 LMOf2365_1220 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013819.1 1210486 R 265669 CDS YP_013820.1 46907431 2797073 1211024..1211554 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1165; hypothetical protein 1211554 2797073 LMOf2365_1221 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013820.1 1211024 D 265669 CDS YP_013821.1 46907432 2799224 1211585..1211896 1 NC_002973.6 identified by match to protein family HMM PF03551; PadR family transcriptional regulator 1211896 2799224 LMOf2365_1222 Listeria monocytogenes serotype 4b str. F2365 PadR family transcriptional regulator YP_013821.1 1211585 D 265669 CDS YP_013822.1 46907433 2797097 1211899..1212450 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1167; hypothetical protein 1212450 2797097 LMOf2365_1223 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013822.1 1211899 D 265669 CDS YP_013823.1 46907434 2798216 1212913..1213659 1 NC_002973.6 identified by match to protein family HMM PF01832; N-acetylmuramoyl-L-alanine amidase 1213659 2798216 LMOf2365_1224 Listeria monocytogenes serotype 4b str. F2365 N-acetylmuramoyl-L-alanine amidase YP_013823.1 1212913 D 265669 CDS YP_013824.1 46907435 2798217 1213929..1214942 1 NC_002973.6 identified by match to protein family HMM PF01832; N-acetylmuramoyl-L-alanine amidase 1214942 2798217 LMOf2365_1225 Listeria monocytogenes serotype 4b str. F2365 N-acetylmuramoyl-L-alanine amidase YP_013824.1 1213929 D 265669 CDS YP_013825.1 46907436 2798814 1215054..1216133 1 NC_002973.6 identified by similarity to SP:Q48677; match to protein family HMM PF05343; peptidase 1216133 2798814 LMOf2365_1226 Listeria monocytogenes serotype 4b str. F2365 peptidase YP_013825.1 1215054 D 265669 CDS YP_013826.1 46907437 2797625 1216159..1216917 1 NC_002973.6 identified by match to protein family HMM PF00588; RNA methyltransferase 1216917 2797625 LMOf2365_1227 Listeria monocytogenes serotype 4b str. F2365 RNA methyltransferase YP_013826.1 1216159 D 265669 CDS YP_013827.1 46907438 2797626 complement(1216962..1217321) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1172; hypothetical protein 1217321 2797626 LMOf2365_1228 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013827.1 1216962 R 265669 CDS YP_013828.1 46907439 2799847 1217478..1217801 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1173; match to protein family HMM PF01638; hypothetical protein 1217801 2799847 LMOf2365_1229 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013828.1 1217478 D 265669 CDS YP_013829.1 46907440 2798499 1218169..1219221 1 NC_002973.6 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1219221 pheS 2798499 pheS Listeria monocytogenes serotype 4b str. F2365 phenylalanyl-tRNA synthetase subunit alpha YP_013829.1 1218169 D 265669 CDS YP_013830.1 46907441 2798162 1219221..1221629 1 NC_002973.6 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1221629 pheT 2798162 pheT Listeria monocytogenes serotype 4b str. F2365 phenylalanyl-tRNA synthetase subunit beta YP_013830.1 1219221 D 265669 CDS YP_013831.1 46907442 2798242 1221790..1222491 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1222491 2798242 LMOf2365_1232 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_013831.1 1221790 D 265669 CDS YP_013832.1 46907443 2798243 1222505..1225915 1 NC_002973.6 identified by match to protein family HMM PF02687; match to protein family HMM TIGR01612; ABC transporter permease 1225915 2798243 LMOf2365_1233 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_013832.1 1222505 D 265669 CDS YP_013833.1 46907444 2798882 1226013..1226465 1 NC_002973.6 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1226465 2798882 LMOf2365_1234 Listeria monocytogenes serotype 4b str. F2365 MarR family transcriptional regulator YP_013833.1 1226013 D 265669 CDS YP_013834.1 46907445 2797408 1226481..1229681 1 NC_002973.6 identified by match to protein family HMM PF03176; match to protein family HMM TIGR01612; MmpL family membrane protein 1229681 2797408 LMOf2365_1235 Listeria monocytogenes serotype 4b str. F2365 MmpL family membrane protein YP_013834.1 1226481 D 265669 CDS YP_013835.1 46907446 2797409 1229785..1230459 1 NC_002973.6 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 1230459 ung-2 2797409 ung-2 Listeria monocytogenes serotype 4b str. F2365 uracil-DNA glycosylase YP_013835.1 1229785 D 265669 CDS YP_013836.1 46907447 2798053 complement(1230497..1231378) 1 NC_002973.6 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease HIII 1231378 2798053 LMOf2365_1237 Listeria monocytogenes serotype 4b str. F2365 ribonuclease HIII YP_013836.1 1230497 R 265669 CDS YP_013837.1 46907448 2798095 1231532..1231840 1 NC_002973.6 identified by similarity to GP:16413651; match to protein family HMM PF05164; hypothetical protein 1231840 2798095 LMOf2365_1238 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013837.1 1231532 D 265669 CDS YP_013838.1 46907449 2799399 1231840..1232382 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1183; match to protein family HMM PF02674; CvpA family protein 1232382 2799399 LMOf2365_1239 Listeria monocytogenes serotype 4b str. F2365 CvpA family protein YP_013838.1 1231840 D 265669 CDS YP_013839.1 46907450 2799090 1232474..1234186 1 NC_002973.6 identified by match to protein family HMM PF02231; match to protein family HMM PF02811; hypothetical protein 1234186 2799090 LMOf2365_1240 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013839.1 1232474 D 265669 CDS YP_013840.1 46907451 2799326 1234209..1236566 1 NC_002973.6 MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein 1236566 mutS-1 2799326 mutS-1 Listeria monocytogenes serotype 4b str. F2365 recombination and DNA strand exchange inhibitor protein YP_013840.1 1234209 D 265669 CDS YP_013841.1 46907452 2799700 1236647..1236958 1 NC_002973.6 identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 1236958 trx-1 2799700 trx-1 Listeria monocytogenes serotype 4b str. F2365 thioredoxin YP_013841.1 1236647 D 265669 CDS YP_013842.1 46907453 2799810 1237034..1238845 1 NC_002973.6 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1238845 uvrC 2799810 uvrC Listeria monocytogenes serotype 4b str. F2365 excinuclease ABC subunit C YP_013842.1 1237034 D 265669 CDS YP_013843.1 46907454 2799832 1239026..1240240 1 NC_002973.6 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1240240 2799832 LMOf2365_1244 Listeria monocytogenes serotype 4b str. F2365 aspartate kinase YP_013843.1 1239026 D 265669 CDS YP_013844.1 46907455 2797161 complement(1240296..1240781) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1189; hypothetical protein 1240781 2797161 LMOf2365_1245 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013844.1 1240296 R 265669 CDS YP_013845.1 46907456 2797727 1240938..1241738 1 NC_002973.6 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 1241738 murI 2797727 murI Listeria monocytogenes serotype 4b str. F2365 glutamate racemase YP_013845.1 1240938 D 265669 CDS YP_013846.1 46907457 2798346 1241751..1242497 1 NC_002973.6 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 1242497 rph 2798346 rph Listeria monocytogenes serotype 4b str. F2365 ribonuclease PH YP_013846.1 1241751 D 265669 CDS YP_013847.1 46907458 2798287 1242501..1243112 1 NC_002973.6 hydrolyzes non-standard nucleotides such as xanthine and inosine; nucleoside-triphosphatase 1243112 2798287 LMOf2365_1248 Listeria monocytogenes serotype 4b str. F2365 nucleoside-triphosphatase YP_013847.1 1242501 D 265669 CDS YP_013848.1 46907459 2798425 1243149..1243673 1 NC_002973.6 identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040; phosphoesterase 1243673 2798425 LMOf2365_1249 Listeria monocytogenes serotype 4b str. F2365 phosphoesterase YP_013848.1 1243149 D 265669 CDS YP_013849.1 46907460 2799125 1244302..1244421 1 NC_002973.6 hypothetical protein 1244421 2799125 LMOf2365_1251 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013849.1 1244302 D 265669 CDS YP_013850.1 46907461 2799087 1244457..1244930 1 NC_002973.6 hypothetical protein 1244930 2799087 LMOf2365_1252 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013850.1 1244457 D 265669 CDS YP_013851.1 46907462 2798470 1245036..1245398 1 NC_002973.6 hypothetical protein 1245398 2798470 LMOf2365_1253 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013851.1 1245036 D 265669 CDS YP_013852.1 46907463 2799075 1246066..1249314 1 NC_002973.6 identified by match to protein family HMM PF00560; match to protein family HMM TIGR01167; match to protein family HMM TIGR01612; cell wall surface anchor family protein 1249314 2799075 LMOf2365_1254 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_013852.1 1246066 D 265669 CDS YP_013853.1 46907464 2799289 1249437..1250795 1 NC_002973.6 identified by similarity to OMNI:NTL01SM01795; hypothetical protein 1250795 2799289 LMOf2365_1255 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013853.1 1249437 D 265669 CDS YP_013854.1 46907465 2799309 complement(1250838..1251431) 1 NC_002973.6 identified by similarity to OMNI:SA2456; hypothetical protein 1251431 2799309 LMOf2365_1256 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013854.1 1250838 R 265669 CDS YP_013855.1 46907466 2799258 complement(1251568..1251975) 1 NC_002973.6 hypothetical protein 1251975 2799258 LMOf2365_1257 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013855.1 1251568 R 265669 CDS YP_013856.1 46907467 2799275 1252140..1252739 1 NC_002973.6 identified by match to protein family HMM PF00300; phosphoglycerate mutase 1252739 2799275 LMOf2365_1258 Listeria monocytogenes serotype 4b str. F2365 phosphoglycerate mutase YP_013856.1 1252140 D 265669 CDS YP_013857.1 46907468 2799322 complement(1252771..1253031) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1203; hypothetical protein 1253031 2799322 LMOf2365_1259 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013857.1 1252771 R 265669 CDS YP_013858.1 46907469 2799261 1253155..1254567 1 NC_002973.6 identified by similarity to SP:P42305; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; ATP-dependent RNA helicase DbpA 1254567 dbpA 2799261 dbpA Listeria monocytogenes serotype 4b str. F2365 ATP-dependent RNA helicase DbpA YP_013858.1 1253155 D 265669 CDS YP_013859.1 46907470 2799296 1254592..1254855 1 NC_002973.6 identified by similarity to GP:16415862; hypothetical protein 1254855 2799296 LMOf2365_1261 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013859.1 1254592 D 265669 CDS YP_013860.1 46907471 2799107 1255023..1255499 1 NC_002973.6 identified by match to protein family HMM PF00293; MutT/nudix family protein 1255499 2799107 LMOf2365_1262 Listeria monocytogenes serotype 4b str. F2365 MutT/nudix family protein YP_013860.1 1255023 D 265669 CDS YP_013861.1 46907472 2799285 complement(1255537..1255782) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1206; hypothetical protein 1255782 2799285 LMOf2365_1263 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013861.1 1255537 R 265669 CDS YP_013862.1 46907473 2799249 complement(1255779..1256984) 1 NC_002973.6 identified by similarity to GP:19749018; transporter 1256984 2799249 LMOf2365_1264 Listeria monocytogenes serotype 4b str. F2365 transporter YP_013862.1 1255779 R 265669 CDS YP_013863.1 46907474 2799041 1257189..1257848 1 NC_002973.6 identified by similarity to SP:P22262; transcriptional regulator 1257848 2799041 LMOf2365_1265 Listeria monocytogenes serotype 4b str. F2365 transcriptional regulator YP_013863.1 1257189 D 265669 CDS YP_013864.1 46907475 2799082 1257820..1258062 1 NC_002973.6 hypothetical protein 1258062 2799082 LMOf2365_1266 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013864.1 1257820 D 265669 CDS YP_013865.1 46907476 2799019 complement(1258149..1258997) 1 NC_002973.6 identified by match to protein family HMM PF02588; hypothetical protein 1258997 2799019 LMOf2365_1267 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013865.1 1258149 R 265669 CDS YP_013866.1 46907477 2799155 complement(1259195..1259302) 1 NC_002973.6 hypothetical protein 1259302 2799155 LMOf2365_1268 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013866.1 1259195 R 265669 CDS YP_013867.1 46907478 2798338 complement(1259327..1259464) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1210; hypothetical protein 1259464 2798338 LMOf2365_1269 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013867.1 1259327 R 265669 CDS YP_013868.1 46907479 2799023 1259615..1260328 1 NC_002973.6 identified by similarity to SP:P39796; match to protein family HMM PF00392; trehalose operon transcriptional repressor 1260328 treR 2799023 treR Listeria monocytogenes serotype 4b str. F2365 trehalose operon transcriptional repressor YP_013868.1 1259615 D 265669 CDS YP_013869.1 46907480 2798311 complement(1260359..1262005) 1 NC_002973.6 identified by similarity to SP:P28904; match to protein family HMM PF00128; trehalose-6-phosphate hydrolase 1262005 treC-2 2798311 treC-2 Listeria monocytogenes serotype 4b str. F2365 trehalose-6-phosphate hydrolase YP_013869.1 1260359 R 265669 CDS YP_013870.1 46907481 2798435 complement(1262024..1263508) 1 NC_002973.6 identified by similarity to SP:P36672; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; PTS system trehalose-specific transporter subunit IIBC 1263508 treB 2798435 treB Listeria monocytogenes serotype 4b str. F2365 PTS system trehalose-specific transporter subunit IIBC YP_013870.1 1262024 R 265669 CDS YP_013871.1 46907482 2799115 1263626..1264087 1 NC_002973.6 identified by match to protein family HMM PF00293; MutT/nudix family protein 1264087 2799115 LMOf2365_1273 Listeria monocytogenes serotype 4b str. F2365 MutT/nudix family protein YP_013871.1 1263626 D 265669 CDS YP_013872.1 46907483 2797749 complement(1264126..1264590) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1215; hypothetical protein 1264590 2797749 LMOf2365_1274 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013872.1 1264126 R 265669 CDS YP_013873.1 46907484 2798415 1264779..1265693 1 NC_002973.6 alpha/beta fold family hydrolase 1265693 2798415 LMOf2365_1275 Listeria monocytogenes serotype 4b str. F2365 alpha/beta fold family hydrolase YP_013873.1 1264779 D 265669 CDS YP_013874.1 46907485 2799849 complement(1265719..1266966) 1 NC_002973.6 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 1266966 proA 2799849 proA Listeria monocytogenes serotype 4b str. F2365 gamma-glutamyl phosphate reductase YP_013874.1 1265719 R 265669 CDS YP_013875.1 46907486 2798289 complement(1266950..1267780) 1 NC_002973.6 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 1267780 proB 2798289 proB Listeria monocytogenes serotype 4b str. F2365 gamma-glutamyl kinase YP_013875.1 1266950 R 265669 CDS YP_013876.1 46907487 2799665 complement(1267927..1269066) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1219; hypothetical protein 1269066 2799665 LMOf2365_1278 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013876.1 1267927 R 265669 CDS YP_013877.1 46907488 2797942 complement(1269146..1269541) 1 NC_002973.6 identified by similarity to SP:Q07683; match to protein family HMM PF01381; ans operon transcriptional repressor 1269541 2797942 LMOf2365_1279 Listeria monocytogenes serotype 4b str. F2365 ans operon transcriptional repressor YP_013877.1 1269146 R 265669 CDS YP_013878.1 46907489 2799748 1269692..1269907 1 NC_002973.6 identified by match to protein family HMM PF01381; DNA-binding protein 1269907 2799748 LMOf2365_1280 Listeria monocytogenes serotype 4b str. F2365 DNA-binding protein YP_013878.1 1269692 D 265669 CDS YP_013879.1 46907490 2798333 1270031..1270564 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1292; hypothetical protein 1270564 2798333 LMOf2365_1281 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013879.1 1270031 D 265669 CDS YP_013880.1 46907491 2798309 1270580..1271245 1 NC_002973.6 lipoprotein 1271245 2798309 LMOf2365_1282 Listeria monocytogenes serotype 4b str. F2365 lipoprotein YP_013880.1 1270580 D 265669 CDS YP_013881.1 46907492 2798445 1271507..1272445 1 NC_002973.6 hypothetical protein 1272445 2798445 LMOf2365_1283 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013881.1 1271507 D 265669 CDS YP_013882.1 46907493 2799036 1272560..1273843 1 NC_002973.6 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1273843 tig 2799036 tig Listeria monocytogenes serotype 4b str. F2365 trigger factor YP_013882.1 1272560 D 265669 CDS YP_013883.1 46907494 2799312 1273929..1274021 1 NC_002973.6 hypothetical protein 1274021 2799312 LMOf2365_1285 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013883.1 1273929 D 265669 CDS YP_013884.1 46907495 2799300 1274028..1275287 1 NC_002973.6 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1275287 clpX 2799300 clpX Listeria monocytogenes serotype 4b str. F2365 ATP-dependent protease ATP-binding subunit ClpX YP_013884.1 1274028 D 265669 CDS YP_013885.1 46907496 2799271 1275406..1275972 1 NC_002973.6 identified by similarity to SP:P72365; match to protein family HMM PF00461; signal peptidase I 1275972 2799271 LMOf2365_1287 Listeria monocytogenes serotype 4b str. F2365 signal peptidase I YP_013885.1 1275406 D 265669 CDS YP_013886.1 46907497 2799098 1276007..1276576 1 NC_002973.6 identified by similarity to SP:P72365; match to protein family HMM PF00461; signal peptidase I 1276576 2799098 LMOf2365_1288 Listeria monocytogenes serotype 4b str. F2365 signal peptidase I YP_013886.1 1276007 D 265669 CDS YP_013887.1 46907498 2799099 1276678..1277220 1 NC_002973.6 identified by similarity to SP:P28628; match to protein family HMM PF00461; signal peptidase I 1277220 2799099 LMOf2365_1289 Listeria monocytogenes serotype 4b str. F2365 signal peptidase I YP_013887.1 1276678 D 265669 CDS YP_013888.1 46907499 2799032 1277230..1278093 1 NC_002973.6 essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase 1278093 rbgA 2799032 rbgA Listeria monocytogenes serotype 4b str. F2365 ribosomal biogenesis GTPase YP_013888.1 1277230 D 265669 CDS YP_013889.1 46907500 2798454 1278090..1278875 1 NC_002973.6 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1278875 rnhB 2798454 rnhB Listeria monocytogenes serotype 4b str. F2365 ribonuclease HII YP_013889.1 1278090 D 265669 CDS YP_013890.1 46907501 2799046 1279009..1279869 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1302; match to protein family HMM PF02481; match to protein family HMM TIGR00732; Smf family protein 1279869 2799046 LMOf2365_1292 Listeria monocytogenes serotype 4b str. F2365 Smf family protein YP_013890.1 1279009 D 265669 CDS YP_013891.1 46907502 2798307 1280142..1282220 1 NC_002973.6 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1282220 topA 2798307 topA Listeria monocytogenes serotype 4b str. F2365 DNA topoisomerase I YP_013891.1 1280142 D 265669 CDS YP_013892.1 46907503 2798171 1282283..1283587 1 NC_002973.6 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 1283587 gid 2798171 gid Listeria monocytogenes serotype 4b str. F2365 tRNA (uracil-5-)-methyltransferase Gid YP_013892.1 1282283 D 265669 CDS YP_013893.1 46907504 2797611 1283870..1284772 1 NC_002973.6 identified by similarity to SP:P22885; match to protein family HMM PF00589; match to protein family HMM PF02899; integrase/recombinase XerC 1284772 xerC 2797611 xerC Listeria monocytogenes serotype 4b str. F2365 integrase/recombinase XerC YP_013893.1 1283870 D 265669 CDS YP_013894.1 46907505 2797010 1284793..1285332 1 NC_002973.6 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 1285332 hslV 2797010 hslV Listeria monocytogenes serotype 4b str. F2365 ATP-dependent protease peptidase subunit YP_013894.1 1284793 D 265669 CDS YP_013895.1 46907506 2799557 1285364..1286755 1 NC_002973.6 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 1286755 hslU 2799557 hslU Listeria monocytogenes serotype 4b str. F2365 ATP-dependent protease ATP-binding subunit HslU YP_013895.1 1285364 D 265669 CDS YP_013896.1 46907507 2798992 1286776..1287555 1 NC_002973.6 CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; transcriptional repressor CodY 1287555 2798992 LMOf2365_1298 Listeria monocytogenes serotype 4b str. F2365 transcriptional repressor CodY YP_013896.1 1286776 D 265669 CDS YP_013897.1 46907508 2798113 1287658..1288077 1 NC_002973.6 identified by match to protein family HMM PF03061; match to protein family HMM TIGR00051; 4-hydroxybenzoyl-CoA thioesterase 1288077 2798113 LMOf2365_1299 Listeria monocytogenes serotype 4b str. F2365 4-hydroxybenzoyl-CoA thioesterase YP_013897.1 1287658 D 265669 CDS YP_013898.1 46907509 2799470 1288100..1288411 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1310; hypothetical protein 1288411 2799470 LMOf2365_1300 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013898.1 1288100 D 265669 CDS YP_013899.1 46907510 2798109 1288414..1289286 1 NC_002973.6 identified by match to protein family HMM PF01263; aldose epimerase 1289286 2798109 LMOf2365_1301 Listeria monocytogenes serotype 4b str. F2365 aldose epimerase YP_013899.1 1288414 D 265669 CDS YP_013900.1 46907511 2797041 complement(1289328..1289924) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1312; match to protein family HMM PF02660; match to protein family HMM TIGR00023; hypothetical protein 1289924 2797041 LMOf2365_1302 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013900.1 1289328 R 265669 CDS YP_013901.1 46907512 2797374 1290082..1290489 1 NC_002973.6 identified by similarity to OMNI:NTL01LM1277; match to protein family HMM PF02629; CoA-binding domain-containing protein 1290489 2797374 LMOf2365_1303 Listeria monocytogenes serotype 4b str. F2365 CoA-binding domain-containing protein YP_013901.1 1290082 D 265669 CDS YP_013902.1 46907513 2798296 1290670..1292637 1 NC_002973.6 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1292637 parE 2798296 parE Listeria monocytogenes serotype 4b str. F2365 DNA topoisomerase IV subunit B YP_013902.1 1290670 D 265669 CDS YP_013903.1 46907514 2798052 1292634..1295093 1 NC_002973.6 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1295093 parC 2798052 parC Listeria monocytogenes serotype 4b str. F2365 DNA topoisomerase IV subunit A YP_013903.1 1292634 D 265669 CDS YP_013904.1 46907515 2798082 1295176..1295643 1 NC_002973.6 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 1295643 luxS 2798082 luxS Listeria monocytogenes serotype 4b str. F2365 S-ribosylhomocysteinase YP_013904.1 1295176 D 265669 CDS YP_013905.1 46907516 2799616 1296271..1298097 1 NC_002973.6 identified by match to protein family HMM PF00560; hypothetical protein 1298097 2799616 LMOf2365_1307 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013905.1 1296271 D 265669 CDS YP_013906.1 46907517 2798275 complement(1298130..1300016) 1 NC_002973.6 identified by match to protein family HMM PF01757; acyltransferase 1300016 2798275 LMOf2365_1308 Listeria monocytogenes serotype 4b str. F2365 acyltransferase YP_013906.1 1298130 R 265669 CDS YP_013907.1 46907518 2798912 1300229..1300927 1 NC_002973.6 identified by similarity to SP:P37965; match to protein family HMM PF03009; glycerophosphoryl diester phosphodiesterase 1300927 2798912 LMOf2365_1309 Listeria monocytogenes serotype 4b str. F2365 glycerophosphoryl diester phosphodiesterase YP_013907.1 1300229 D 265669 CDS YP_013908.1 46907519 2798886 1301160..1302836 1 NC_002973.6 identified by similarity to SP:P18158; match to protein family HMM PF01266; glycerol-3-phosphate dehydrogenase 1302836 glpD 2798886 glpD Listeria monocytogenes serotype 4b str. F2365 glycerol-3-phosphate dehydrogenase YP_013908.1 1301160 D 265669 CDS YP_013909.1 46907520 2799437 1302963..1303880 1 NC_002973.6 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1303880 miaA 2799437 miaA Listeria monocytogenes serotype 4b str. F2365 tRNA delta(2)-isopentenylpyrophosphate transferase YP_013909.1 1302963 D 265669 CDS YP_013910.1 46907521 2799755 1304002..1304235 1 NC_002973.6 identified by match to protein family HMM PF01423; match to protein family HMM PF03329; hfq protein 1304235 hfq 2799755 hfq Listeria monocytogenes serotype 4b str. F2365 hfq protein YP_013910.1 1304002 D 265669 CDS YP_013911.1 46907522 2799151 1304340..1305569 1 NC_002973.6 GTP-binding domain-containing protein 1305569 2799151 LMOf2365_1313 Listeria monocytogenes serotype 4b str. F2365 GTP-binding domain-containing protein YP_013911.1 1304340 D 265669 CDS YP_013912.1 46907523 2797424 1305562..1306788 1 NC_002973.6 hypothetical protein 1306788 2797424 LMOf2365_1314 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013912.1 1305562 D 265669 CDS YP_013913.1 46907524 2797115 1306804..1306914 1 NC_002973.6 hypothetical protein 1306914 2797115 LMOf2365_1315 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013913.1 1306804 D 265669 CDS YP_013914.1 46907525 2798561 1306990..1307358 1 NC_002973.6 identified by similarity to SP:P37582; match to protein family HMM PF00376; GlnR family transcriptional regulator 1307358 glnR 2798561 glnR Listeria monocytogenes serotype 4b str. F2365 GlnR family transcriptional regulator YP_013914.1 1306990 D 265669 CDS YP_013915.1 46907526 2798633 1307429..1308763 1 NC_002973.6 identified by similarity to SP:P12425; match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; glutamine synthetase, type I 1308763 glnA 2798633 glnA Listeria monocytogenes serotype 4b str. F2365 glutamine synthetase, type I YP_013915.1 1307429 D 265669 CDS YP_013916.1 46907527 2798235 1308907..1310202 1 NC_002973.6 identified by similarity to SP:P30329; match to protein family HMM PF02040; match to protein family HMM TIGR00935; arsenical pump membrane protein 1310202 arsB 2798235 arsB Listeria monocytogenes serotype 4b str. F2365 arsenical pump membrane protein YP_013916.1 1308907 D 265669 CDS YP_013917.1 46907528 2797656 complement(1310236..1310760) 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 1310760 2797656 LMOf2365_1319 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_013917.1 1310236 R 265669 CDS YP_013918.1 46907529 2799718 complement(1310791..1311405) 1 NC_002973.6 Represses a number of genes involved in the response to DNA damage; LexA repressor 1311405 lexA 2799718 lexA Listeria monocytogenes serotype 4b str. F2365 LexA repressor YP_013918.1 1310791 R 265669 CDS YP_013919.1 46907530 2799686 1311562..1311891 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1330; cell division suppressor protein YneA 1311891 2799686 LMOf2365_1321 Listeria monocytogenes serotype 4b str. F2365 cell division suppressor protein YneA YP_013919.1 1311562 D 265669 CDS YP_013920.1 46907531 2799085 1311985..1312212 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1331; match to protein family HMM PF05979; hypothetical protein 1312212 2799085 LMOf2365_1322 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013920.1 1311985 D 265669 CDS YP_013921.1 46907532 2799901 1312359..1314353 1 NC_002973.6 identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; transketolase 1314353 tkt-2 2799901 tkt-2 Listeria monocytogenes serotype 4b str. F2365 transketolase YP_013921.1 1312359 D 265669 CDS YP_013922.1 46907533 2799648 1314574..1314813 1 NC_002973.6 identified by similarity to SP:P45708; match to protein family HMM PF03672; hypothetical protein 1314813 2799648 LMOf2365_1324 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013922.1 1314574 D 265669 CDS YP_013923.1 46907534 2797635 complement(1314862..1315593) 1 NC_002973.6 identified by similarity to GP:16413818; hypothetical protein 1315593 2797635 LMOf2365_1325 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013923.1 1314862 R 265669 CDS YP_013924.1 46907535 2798055 complement(1315615..1316121) 1 NC_002973.6 identified by match to protein family HMM PF02195; ParB-like nuclease domain-containing protein 1316121 2798055 LMOf2365_1326 Listeria monocytogenes serotype 4b str. F2365 ParB-like nuclease domain-containing protein YP_013924.1 1315615 R 265669 CDS YP_013925.1 46907536 2799419 complement(1316131..1317435) 1 NC_002973.6 hypothetical protein 1317435 2799419 LMOf2365_1327 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013925.1 1316131 R 265669 CDS YP_013926.1 46907537 2797365 complement(1317425..1318624) 1 NC_002973.6 identified by match to protein family HMM PF00176; SNF2 family protein 1318624 2797365 LMOf2365_1328 Listeria monocytogenes serotype 4b str. F2365 SNF2 family protein YP_013926.1 1317425 R 265669 CDS YP_013927.1 46907538 2797962 complement(1318608..1318982) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1338; hypothetical protein 1318982 2797962 LMOf2365_1329 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013927.1 1318608 R 265669 CDS YP_013928.1 46907539 2799009 1319275..1320003 1 NC_002973.6 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1320003 pyrH 2799009 pyrH Listeria monocytogenes serotype 4b str. F2365 uridylate kinase YP_013928.1 1319275 D 265669 CDS YP_013929.1 46907540 2798047 1320003..1320560 1 NC_002973.6 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1320560 frr 2798047 frr Listeria monocytogenes serotype 4b str. F2365 ribosome recycling factor YP_013929.1 1320003 D 265669 CDS YP_013930.1 46907541 2798063 1320791..1321549 1 NC_002973.6 catalyzes the formation of UDP pyrophosphate from isopentenyl pyrophosphate; UDP pyrophosphate synthase 1321549 uppS 2798063 uppS Listeria monocytogenes serotype 4b str. F2365 UDP pyrophosphate synthase YP_013930.1 1320791 D 265669 CDS YP_013931.1 46907542 2798958 1321563..1322351 1 NC_002973.6 identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase 1322351 cdsA 2798958 cdsA Listeria monocytogenes serotype 4b str. F2365 phosphatidate cytidylyltransferase YP_013931.1 1321563 D 265669 CDS YP_013932.1 46907543 2799916 1322366..1323508 1 NC_002973.6 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1323508 dxr 2799916 dxr Listeria monocytogenes serotype 4b str. F2365 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_013932.1 1322366 D 265669 CDS YP_013933.1 46907544 2799525 1323522..1324784 1 NC_002973.6 identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054; membrane-associated zinc metalloprotease 1324784 2799525 LMOf2365_1335 Listeria monocytogenes serotype 4b str. F2365 membrane-associated zinc metalloprotease YP_013933.1 1323522 D 265669 CDS YP_013934.1 46907545 2799246 1324825..1326531 1 NC_002973.6 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1326531 proS 2799246 proS Listeria monocytogenes serotype 4b str. F2365 prolyl-tRNA synthetase YP_013934.1 1324825 D 265669 CDS YP_013935.1 46907546 2798788 1326637..1330971 1 NC_002973.6 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; required for leading strand synthesis; PolC exhibits 3' to 5' exonuclease activity; DNA polymerase III PolC 1330971 polC 2798788 polC Listeria monocytogenes serotype 4b str. F2365 DNA polymerase III PolC YP_013935.1 1326637 D 265669 CDS YP_013936.1 46907547 2797035 1331153..1331620 1 NC_002973.6 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 1331620 2797035 LMOf2365_1338 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013936.1 1331153 D 265669 CDS YP_013937.1 46907548 2796996 1331650..1332768 1 NC_002973.6 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1332768 nusA 2796996 nusA Listeria monocytogenes serotype 4b str. F2365 transcription elongation factor NusA YP_013937.1 1331650 D 265669 CDS YP_013938.1 46907549 2798606 1332783..1333067 1 NC_002973.6 identified by similarity to SP:P32728; match to protein family HMM PF04296; hypothetical protein 1333067 2798606 LMOf2365_1340 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013938.1 1332783 D 265669 CDS YP_013939.1 46907550 2798199 1333060..1333359 1 NC_002973.6 identified by match to protein family HMM PF01248; ribosomal protein L7A family protein 1333359 2798199 LMOf2365_1341 Listeria monocytogenes serotype 4b str. F2365 ribosomal protein L7A family protein YP_013939.1 1333060 D 265669 CDS YP_013940.1 46907551 2799779 1333382..1335730 1 NC_002973.6 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1335730 infB 2799779 infB Listeria monocytogenes serotype 4b str. F2365 translation initiation factor IF-2 YP_013940.1 1333382 D 265669 CDS YP_013941.1 46907552 2799752 1335727..1336005 1 NC_002973.6 identified by similarity to SP:P32730; match to protein family HMM PF04456; hypothetical protein 1336005 2799752 LMOf2365_1343 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013941.1 1335727 D 265669 CDS YP_013942.1 46907553 2799679 1336022..1336366 1 NC_002973.6 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1336366 rbfA 2799679 rbfA Listeria monocytogenes serotype 4b str. F2365 ribosome-binding factor A YP_013942.1 1336022 D 265669 CDS YP_013943.1 46907554 2799762 1336462..1337376 1 NC_002973.6 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1337376 truB 2799762 truB Listeria monocytogenes serotype 4b str. F2365 tRNA pseudouridine synthase B YP_013943.1 1336462 D 265669 CDS YP_013944.1 46907555 2797176 1337446..1338390 1 NC_002973.6 identified by match to protein family HMM PF01687; match to protein family HMM TIGR00083; match to protein family HMM TIGR00125; riboflavin biosynthesis protein RibF 1338390 ribF 2797176 ribF Listeria monocytogenes serotype 4b str. F2365 riboflavin biosynthesis protein RibF YP_013944.1 1337446 D 265669 CDS YP_013945.1 46907556 2797499 1338527..1338796 1 NC_002973.6 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 1338796 rpsO 2797499 rpsO Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S15 YP_013945.1 1338527 D 265669 CDS YP_013946.1 46907557 2799634 1339044..1341215 1 NC_002973.6 identified by similarity to SP:P50849; match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; polynucleotide phosphorylase/polyadenylase 1341215 pnp 2799634 pnp Listeria monocytogenes serotype 4b str. F2365 polynucleotide phosphorylase/polyadenylase YP_013946.1 1339044 D 265669 CDS YP_013947.1 46907558 2797683 complement(1341254..1342294) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1358; match to protein family HMM PF03193; match to protein family HMM TIGR00157; hypothetical protein 1342294 2797683 LMOf2365_1349 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013947.1 1341254 R 265669 CDS YP_013948.1 46907559 2799529 complement(1342457..1342918) 1 NC_002973.6 identified by similarity to GP:16413843; hypothetical protein 1342918 2799529 LMOf2365_1350 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013948.1 1342457 R 265669 CDS YP_013949.1 46907560 2799499 complement(1342964..1343320) 1 NC_002973.6 hypothetical protein 1343320 2799499 LMOf2365_1351 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013949.1 1342964 R 265669 CDS YP_013950.2 161611350 2799656 1343518..1343667 1 NC_002973.6 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1343667 rpmG 2799656 rpmG Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L33 YP_013950.2 1343518 D 265669 CDS YP_013951.1 46907562 2797654 1343723..1344262 1 NC_002973.6 identified by match to protein family HMM PF01812; 5-formyltetrahydrofolate cyclo-ligase 1344262 2797654 LMOf2365_1353 Listeria monocytogenes serotype 4b str. F2365 5-formyltetrahydrofolate cyclo-ligase YP_013951.1 1343723 D 265669 CDS YP_013952.1 46907563 2798072 1344343..1345899 1 NC_002973.6 identified by match to protein family HMM PF01694; rhomboid family protein 1345899 2798072 LMOf2365_1354 Listeria monocytogenes serotype 4b str. F2365 rhomboid family protein YP_013952.1 1344343 D 265669 CDS YP_013953.1 46907564 2798997 1345912..1346124 1 NC_002973.6 identified by similarity to GP:16410754; match to protein family HMM PF06014; hypothetical protein 1346124 2798997 LMOf2365_1355 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013953.1 1345912 D 265669 CDS YP_013954.1 46907565 2797963 1346149..1347117 1 NC_002973.6 identified by similarity to SP:P54495; match to protein family HMM PF00480; match to protein family HMM TIGR00744; glucokinase 1347117 glcK 2797963 glcK Listeria monocytogenes serotype 4b str. F2365 glucokinase YP_013954.1 1346149 D 265669 CDS YP_013955.1 46907566 2798952 1347263..1348354 1 NC_002973.6 lipoprotein 1348354 2798952 LMOf2365_1357 Listeria monocytogenes serotype 4b str. F2365 lipoprotein YP_013955.1 1347263 D 265669 CDS YP_013956.1 46907567 2799561 complement(1348372..1348689) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1367; hypothetical protein 1348689 2799561 LMOf2365_1358 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013956.1 1348372 R 265669 CDS YP_013957.1 46907568 2799435 complement(1348686..1349153) 1 NC_002973.6 identified by similarity to PIR:AB1605; hypothetical protein 1349153 2799435 LMOf2365_1359 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013957.1 1348686 R 265669 CDS YP_013958.1 46907569 2797046 complement(1349116..1349400) 1 NC_002973.6 identified by similarity to GP:16413853; ATP-binding protein 1349400 2797046 LMOf2365_1360 Listeria monocytogenes serotype 4b str. F2365 ATP-binding protein YP_013958.1 1349116 R 265669 CDS YP_013959.1 46907570 2797808 complement(1349393..1349815) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1370; hypothetical protein 1349815 2797808 LMOf2365_1361 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013959.1 1349393 R 265669 CDS YP_013960.1 46907571 2799721 complement(1349812..1350135) 1 NC_002973.6 identified by similarity to SP:P25955; general secretion pathway protein G 1350135 2799721 LMOf2365_1362 Listeria monocytogenes serotype 4b str. F2365 general secretion pathway protein G YP_013960.1 1349812 R 265669 CDS YP_013961.1 46907572 2798374 complement(1350150..1351181) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1372; match to protein family HMM PF00482; general secretion pathway protein F 1351181 2798374 LMOf2365_1363 Listeria monocytogenes serotype 4b str. F2365 general secretion pathway protein F YP_013961.1 1350150 R 265669 CDS YP_013962.1 46907573 2799654 complement(1351159..1352181) 1 NC_002973.6 identified by similarity to SP:P25953; match to protein family HMM PF00437; general secretion pathway protein E 1352181 2799654 LMOf2365_1364 Listeria monocytogenes serotype 4b str. F2365 general secretion pathway protein E YP_013962.1 1351159 R 265669 CDS YP_013963.1 46907574 2799805 1352720..1353808 1 NC_002973.6 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 1353808 gcvT 2799805 gcvT Listeria monocytogenes serotype 4b str. F2365 glycine cleavage system aminomethyltransferase T YP_013963.1 1352720 D 265669 CDS YP_013964.1 46907575 2799829 1353824..1355170 1 NC_002973.6 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 1355170 gcvP1 2799829 gcvP1 Listeria monocytogenes serotype 4b str. F2365 glycine dehydrogenase subunit 1 YP_013964.1 1353824 D 265669 CDS YP_013965.1 46907576 2799770 1355185..1356633 1 NC_002973.6 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 1356633 gcvP2 2799770 gcvP2 Listeria monocytogenes serotype 4b str. F2365 glycine dehydrogenase subunit 2 YP_013965.1 1355185 D 265669 CDS YP_013966.1 46907577 2799788 complement(1356672..1357052) 1 NC_002973.6 identified by match to protein family HMM PF00581; rhodanese-like domain-containing protein 1357052 2799788 LMOf2365_1368 Listeria monocytogenes serotype 4b str. F2365 rhodanese-like domain-containing protein YP_013966.1 1356672 R 265669 CDS YP_013967.1 46907578 2799822 complement(1357114..1357386) 1 NC_002973.6 identified by similarity to GP:16413862; hypothetical protein 1357386 2799822 LMOf2365_1369 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013967.1 1357114 R 265669 CDS YP_013968.1 46907579 2799813 complement(1357399..1358364) 1 NC_002973.6 identified by similarity to SP:P54515; hypothetical protein 1358364 2799813 LMOf2365_1370 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013968.1 1357399 R 265669 CDS YP_013969.1 46907580 2797000 1358544..1359605 1 NC_002973.6 identified by match to protein family HMM PF00557; M24 family peptidase 1359605 2797000 LMOf2365_1371 Listeria monocytogenes serotype 4b str. F2365 M24 family peptidase YP_013969.1 1358544 D 265669 CDS YP_013970.1 46907581 2799808 1359708..1360265 1 NC_002973.6 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1360265 efp 2799808 efp Listeria monocytogenes serotype 4b str. F2365 elongation factor P YP_013970.1 1359708 D 265669 CDS YP_013971.1 46907582 2797028 1360424..1360903 1 NC_002973.6 identified by match to protein family HMM PF00364; match to protein family HMM TIGR00531; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1360903 accB 2797028 accB Listeria monocytogenes serotype 4b str. F2365 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_013971.1 1360424 D 265669 CDS YP_013972.1 46907583 2797052 1360917..1362281 1 NC_002973.6 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 1362281 accC 2797052 accC Listeria monocytogenes serotype 4b str. F2365 acetyl-CoA carboxylase biotin carboxylase subunit YP_013972.1 1360917 D 265669 CDS YP_013973.1 46907584 2797197 1362285..1362692 1 NC_002973.6 identified by similarity to SP:P54519; match to protein family HMM PF03780; hypothetical protein 1362692 2797197 LMOf2365_1375 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013973.1 1362285 D 265669 CDS YP_013974.1 46907585 2797756 1362723..1363109 1 NC_002973.6 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1363109 nusB 2797756 nusB Listeria monocytogenes serotype 4b str. F2365 transcription antitermination protein NusB YP_013974.1 1362723 D 265669 CDS YP_013975.1 46907586 2799726 1363206..1364060 1 NC_002973.6 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1364060 folD 2799726 folD Listeria monocytogenes serotype 4b str. F2365 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_013975.1 1363206 D 265669 CDS YP_013976.1 46907587 2799241 1364079..1365431 1 NC_002973.6 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1365431 xseA 2799241 xseA Listeria monocytogenes serotype 4b str. F2365 exodeoxyribonuclease VII large subunit YP_013976.1 1364079 D 265669 CDS YP_013977.1 46907588 2799636 1365421..1365648 1 NC_002973.6 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 1365648 xseB 2799636 xseB Listeria monocytogenes serotype 4b str. F2365 exodeoxyribonuclease VII small subunit YP_013977.1 1365421 D 265669 CDS YP_013978.1 46907589 2797247 1365651..1366532 1 NC_002973.6 identified by similarity to SP:Q08291; match to protein family HMM PF00348; geranyltranstransferase 1366532 2797247 LMOf2365_1380 Listeria monocytogenes serotype 4b str. F2365 geranyltranstransferase YP_013978.1 1365651 D 265669 CDS YP_013979.1 46907590 2799704 1366731..1366931 1 NC_002973.6 identified by match to protein family HMM PF00313; cold-shock domain-contain protein 1366931 2799704 LMOf2365_1381 Listeria monocytogenes serotype 4b str. F2365 cold-shock domain-contain protein YP_013979.1 1366731 D 265669 CDS YP_013980.1 46907591 2797021 1367098..1368927 1 NC_002973.6 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1368927 dxs 2797021 dxs Listeria monocytogenes serotype 4b str. F2365 1-deoxy-D-xylulose-5-phosphate synthase YP_013980.1 1367098 D 265669 CDS YP_013981.1 46907592 2799664 1368924..1369748 1 NC_002973.6 identified by similarity to SP:Q06803; match to protein family HMM PF01479; match to protein family HMM PF01728; match to protein family HMM TIGR00478; hemolysin A 1369748 2799664 LMOf2365_1383 Listeria monocytogenes serotype 4b str. F2365 hemolysin A YP_013981.1 1368924 D 265669 CDS YP_013982.1 46907593 2799896 1369939..1370388 1 NC_002973.6 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor 1370388 argR 2799896 argR Listeria monocytogenes serotype 4b str. F2365 arginine repressor YP_013982.1 1369939 D 265669 CDS YP_013983.1 46907594 2798873 1370411..1372102 1 NC_002973.6 identified by similarity to SP:P17894; match to protein family HMM TIGR00634; DNA repair protein RecN 1372102 recN 2798873 recN Listeria monocytogenes serotype 4b str. F2365 DNA repair protein RecN YP_013983.1 1370411 D 265669 CDS YP_013984.1 46907595 2797040 1372232..1373098 1 NC_002973.6 identified by match to protein family HMM PF01515; phosphate acetyl/butyryltransferase 1373098 2797040 LMOf2365_1386 Listeria monocytogenes serotype 4b str. F2365 phosphate acetyl/butyryltransferase YP_013984.1 1372232 D 265669 CDS YP_013985.1 46907596 2799405 1373235..1374302 1 NC_002973.6 catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; butyrate kinase 1374302 2799405 LMOf2365_1387 Listeria monocytogenes serotype 4b str. F2365 butyrate kinase YP_013985.1 1373235 D 265669 CDS YP_013986.1 46907597 2797389 1374317..1375744 1 NC_002973.6 E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1375744 2797389 LMOf2365_1388 Listeria monocytogenes serotype 4b str. F2365 dihydrolipoamide dehydrogenase YP_013986.1 1374317 D 265669 CDS YP_013987.1 46907598 2798891 1375769..1376764 1 NC_002973.6 identified by similarity to SP:P37940; match to protein family HMM PF00676; 2-oxoisovalerate dehydrogenase E1 component subunit alpha 1376764 2798891 LMOf2365_1389 Listeria monocytogenes serotype 4b str. F2365 2-oxoisovalerate dehydrogenase E1 component subunit alpha YP_013987.1 1375769 D 265669 CDS YP_013988.1 46907599 2798879 1376781..1377764 1 NC_002973.6 identified by similarity to SP:P37941; match to protein family HMM PF02779; match to protein family HMM PF02780; 2-oxoisovalerate dehydrogenase E1 subunit beta 1377764 2798879 LMOf2365_1390 Listeria monocytogenes serotype 4b str. F2365 2-oxoisovalerate dehydrogenase E1 subunit beta YP_013988.1 1376781 D 265669 CDS YP_013989.1 46907600 2798684 1377795..1379045 1 NC_002973.6 identified by similarity to SP:P37942; match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase 1379045 2798684 LMOf2365_1391 Listeria monocytogenes serotype 4b str. F2365 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase YP_013989.1 1377795 D 265669 CDS YP_013990.1 46907601 2797102 complement(1379201..1379317) 1 NC_002973.6 hypothetical protein 1379317 2797102 LMOf2365_1392 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013990.1 1379201 R 265669 CDS YP_013991.1 46907602 2798789 1379419..1380510 1 NC_002973.6 identified by match to protein family HMM PF01546; match to protein family HMM TIGR01883; M20/M25/M40 family peptidase 1380510 2798789 LMOf2365_1393 Listeria monocytogenes serotype 4b str. F2365 M20/M25/M40 family peptidase YP_013991.1 1379419 D 265669 CDS YP_013992.1 46907603 2798802 1380510..1380629 1 NC_002973.6 hypothetical protein 1380629 2798802 LMOf2365_1394 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013992.1 1380510 D 265669 CDS YP_013993.1 46907604 2799329 1380655..1382073 1 NC_002973.6 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1382073 gnd 2799329 gnd Listeria monocytogenes serotype 4b str. F2365 6-phosphogluconate dehydrogenase YP_013993.1 1380655 D 265669 CDS YP_013994.1 46907605 2798761 1382264..1382944 1 NC_002973.6 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1382944 2798761 LMOf2365_1396 Listeria monocytogenes serotype 4b str. F2365 DNA-binding response regulator YP_013994.1 1382264 D 265669 CDS YP_013995.1 46907606 2799310 1382941..1384392 1 NC_002973.6 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 1384392 2799310 LMOf2365_1397 Listeria monocytogenes serotype 4b str. F2365 sensor histidine kinase YP_013995.1 1382941 D 265669 CDS YP_013996.1 46907607 2798809 complement(1384429..1385256) 1 NC_002973.6 involved in biogenesis of membrane proteins; Firmicutes specific proteins are shorter than other bacterial counterparts and have a signal peptide and lipid attachment site; OxaA-like protein precursor 1385256 2798809 LMOf2365_1398 Listeria monocytogenes serotype 4b str. F2365 OxaA-like protein precursor YP_013996.1 1384429 R 265669 CDS YP_013997.1 46907608 2799545 complement(1385293..1385574) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1406; hypothetical protein 1385574 2799545 LMOf2365_1399 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013997.1 1385293 R 265669 CDS YP_013998.1 46907609 2798704 complement(1385660..1385941) 1 NC_002973.6 catalyzes the hydrolysis of acylphosphate; acylphosphatase 1385941 2798704 LMOf2365_1400 Listeria monocytogenes serotype 4b str. F2365 acylphosphatase YP_013998.1 1385660 R 265669 CDS YP_013999.1 46907610 2799077 1386081..1386428 1 NC_002973.6 identified by similarity to OMNI:SA1438; hypothetical protein 1386428 2799077 LMOf2365_1401 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_013999.1 1386081 D 265669 CDS YP_014000.1 46907611 2798671 1386457..1387533 1 NC_002973.6 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase 1387533 fni 2798671 fni Listeria monocytogenes serotype 4b str. F2365 isopentenyl pyrophosphate isomerase YP_014000.1 1386457 D 265669 CDS YP_014001.1 46907612 2798730 complement(1387573..1388532) 1 NC_002973.6 identified by match to protein family HMM PF00581; hypothetical protein 1388532 2798730 LMOf2365_1403 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014001.1 1387573 R 265669 CDS YP_014002.1 46907613 2798755 1388813..1389709 1 NC_002973.6 identified by match to protein family HMM PF02588; hypothetical protein 1389709 2798755 LMOf2365_1404 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014002.1 1388813 D 265669 CDS YP_014003.1 46907614 2799732 1389860..1392133 1 NC_002973.6 identified by similarity to SP:P21458; match to protein family HMM PF01580; FtsK/SpoIIIE family protein 1392133 2799732 LMOf2365_1405 Listeria monocytogenes serotype 4b str. F2365 FtsK/SpoIIIE family protein YP_014003.1 1389860 D 265669 CDS YP_014004.1 46907615 2797692 complement(1392167..1393006) 1 NC_002973.6 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 1393006 2797692 LMOf2365_1406 Listeria monocytogenes serotype 4b str. F2365 pyrroline-5-carboxylate reductase YP_014004.1 1392167 R 265669 CDS YP_014005.1 46907616 2798738 1393359..1394432 1 NC_002973.6 identified by similarity to SP:Q48754; match to protein family HMM PF02608; surface antigen 1394432 2798738 LMOf2365_1407 Listeria monocytogenes serotype 4b str. F2365 surface antigen YP_014005.1 1393359 D 265669 CDS YP_014006.1 46907617 2799201 1394864..1396405 1 NC_002973.6 ABC transporter ATP-binding protein 1396405 2799201 LMOf2365_1408 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_014006.1 1394864 D 265669 CDS YP_014007.1 46907618 2798383 1396398..1397450 1 NC_002973.6 identified by match to protein family HMM PF02653; ABC transporter permease 1397450 2798383 LMOf2365_1409 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_014007.1 1396398 D 265669 CDS YP_014008.1 46907619 2798713 1397447..1398397 1 NC_002973.6 identified by match to protein family HMM PF02653; ABC transporter permease 1398397 2798713 LMOf2365_1410 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_014008.1 1397447 D 265669 CDS YP_014009.1 46907620 2798280 1398514..1399806 1 NC_002973.6 identified by similarity to OMNI:NTL01BH2396; match to protein family HMM PF05193; hypothetical protein 1399806 2798280 LMOf2365_1411 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014009.1 1398514 D 265669 CDS YP_014010.1 46907621 2798690 1399787..1401073 1 NC_002973.6 identified by match to protein family HMM PF00675; match to protein family HMM PF05193; M16 family peptidase 1401073 2798690 LMOf2365_1412 Listeria monocytogenes serotype 4b str. F2365 M16 family peptidase YP_014010.1 1399787 D 265669 CDS YP_014011.1 46907622 2799304 1401165..1401896 1 NC_002973.6 identified by similarity to SP:P51831; match to protein family HMM PF00106; 3-ketoacyl-ACP reductase 1401896 2799304 LMOf2365_1413 Listeria monocytogenes serotype 4b str. F2365 3-ketoacyl-ACP reductase YP_014011.1 1401165 D 265669 CDS YP_014012.1 46907623 2798365 1401947..1402876 1 NC_002973.6 hypothetical protein 1402876 2798365 LMOf2365_1414 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014012.1 1401947 D 265669 CDS YP_014013.1 46907624 2797801 1402967..1403545 1 NC_002973.6 identified by similarity to SP:P46322; match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1403545 pgsA 2797801 pgsA Listeria monocytogenes serotype 4b str. F2365 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_014013.1 1402967 D 265669 CDS YP_014014.1 46907625 2798750 1403613..1404857 1 NC_002973.6 identified by similarity to SP:P46323; match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; competence damage-inducible protein A 1404857 2798750 LMOf2365_1416 Listeria monocytogenes serotype 4b str. F2365 competence damage-inducible protein A YP_014014.1 1403613 D 265669 CDS YP_014015.1 46907626 2798782 1405130..1406176 1 NC_002973.6 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1406176 recA 2798782 recA Listeria monocytogenes serotype 4b str. F2365 recombinase A YP_014015.1 1405130 D 265669 CDS YP_014016.1 46907627 2799595 1406477..1408039 1 NC_002973.6 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1408039 2799595 LMOf2365_1418 Listeria monocytogenes serotype 4b str. F2365 phosphodiesterase YP_014016.1 1406477 D 265669 CDS YP_014017.1 46907628 2799607 1408178..1408651 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 1408651 2799607 LMOf2365_1419 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_014017.1 1408178 D 265669 CDS YP_014018.1 46907629 2799613 1408657..1409460 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1427; match to protein family HMM PF00149; match to protein family HMM TIGR00282; hypothetical protein 1409460 2799613 LMOf2365_1420 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014018.1 1408657 D 265669 CDS YP_014019.1 46907630 2797782 1409477..1409839 1 NC_002973.6 identified by similarity to GP:16413912; hypothetical protein 1409839 2797782 LMOf2365_1421 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014019.1 1409477 D 265669 CDS YP_014020.1 46907631 2798745 1409950..1412532 1 NC_002973.6 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1412532 mutS-2 2798745 mutS-2 Listeria monocytogenes serotype 4b str. F2365 DNA mismatch repair protein MutS YP_014020.1 1409950 D 265669 CDS YP_014021.1 46907632 2799603 1412552..1414363 1 NC_002973.6 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 1414363 mutL 2799603 mutL Listeria monocytogenes serotype 4b str. F2365 DNA mismatch repair protein YP_014021.1 1412552 D 265669 CDS YP_014022.1 46907633 2799194 1414380..1414928 1 NC_002973.6 identified by similarity to SP:P30300; match to protein family HMM PF04309; glycerol uptake operon antiterminator regulatory protein 1414928 glpP 2799194 glpP Listeria monocytogenes serotype 4b str. F2365 glycerol uptake operon antiterminator regulatory protein YP_014022.1 1414380 D 265669 CDS YP_014023.1 46907634 2798776 1415354..1417585 1 NC_002973.6 identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255; formate acetyltransferase 1417585 pfl-1 2798776 pfl-1 Listeria monocytogenes serotype 4b str. F2365 formate acetyltransferase YP_014023.1 1415354 D 265669 CDS YP_014024.1 46907635 2798698 1417662..1418408 1 NC_002973.6 identified by similarity to SP:P09374; match to protein family HMM PF04055; pyruvate formate-lyase activating enzyme 1418408 pflA 2798698 pflA Listeria monocytogenes serotype 4b str. F2365 pyruvate formate-lyase activating enzyme YP_014024.1 1417662 D 265669 CDS YP_014025.1 46907636 2798326 complement(1418442..1418972) 1 NC_002973.6 identified by match to protein family HMM PF03551; PadR family transcriptional regulator 1418972 2798326 LMOf2365_1427 Listeria monocytogenes serotype 4b str. F2365 PadR family transcriptional regulator YP_014025.1 1418442 R 265669 CDS YP_014026.1 46907637 2797819 1419157..1420332 1 NC_002973.6 identified by match to protein family HMM PF00083; major facilitator family transporter 1420332 2797819 LMOf2365_1428 Listeria monocytogenes serotype 4b str. F2365 major facilitator family transporter YP_014026.1 1419157 D 265669 CDS YP_014027.1 46907638 2797650 1420467..1421015 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1436; hypothetical protein 1421015 2797650 LMOf2365_1429 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014027.1 1420467 D 265669 CDS YP_014028.1 46907639 2798677 1421032..1421259 1 NC_002973.6 identified by match to protein family HMM PF01381; DNA-binding protein 1421259 2798677 LMOf2365_1430 Listeria monocytogenes serotype 4b str. F2365 DNA-binding protein YP_014028.1 1421032 D 265669 CDS YP_014029.1 46907640 2798357 1421299..1421832 1 NC_002973.6 identified by similarity to OMNI:NTL01LM1404; DNA topology modulation protein FlaR 1421832 flaR 2798357 flaR Listeria monocytogenes serotype 4b str. F2365 DNA topology modulation protein FlaR YP_014029.1 1421299 D 265669 CDS YP_014030.1 46907641 2798699 complement(1422067..1423389) 1 NC_002973.6 identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein 1423389 2798699 LMOf2365_1432 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_014030.1 1422067 R 265669 CDS YP_014031.1 46907642 2798725 complement(1423576..1424745) 1 NC_002973.6 identified by similarity to SP:P45359; match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; acetyl-CoA acetyltransferase 1424745 2798725 LMOf2365_1433 Listeria monocytogenes serotype 4b str. F2365 acetyl-CoA acetyltransferase YP_014031.1 1423576 R 265669 CDS YP_014032.1 46907643 2798767 1424895..1426061 1 NC_002973.6 identified by similarity to GP:9937383; match to protein family HMM PF01154; match to protein family HMM TIGR01835; hydroxymethylglutaryl-CoA synthase 1426061 mvaS 2798767 mvaS Listeria monocytogenes serotype 4b str. F2365 hydroxymethylglutaryl-CoA synthase YP_014032.1 1424895 D 265669 CDS YP_014033.1 46907644 2799050 complement(1426084..1426683) 1 NC_002973.6 transporter 1426683 2799050 LMOf2365_1435 Listeria monocytogenes serotype 4b str. F2365 transporter YP_014033.1 1426084 R 265669 CDS YP_014034.1 46907645 2798695 complement(1426753..1427997) 1 NC_002973.6 identified by similarity to GP:17982120; transporter 1427997 2798695 LMOf2365_1436 Listeria monocytogenes serotype 4b str. F2365 transporter YP_014034.1 1426753 R 265669 CDS YP_014035.1 46907646 2798796 complement(1428016..1429284) 1 NC_002973.6 identified by match to protein family HMM PF01663; type I phosphodiesterase/nucleotide pyrophosphatase 1429284 2798796 LMOf2365_1437 Listeria monocytogenes serotype 4b str. F2365 type I phosphodiesterase/nucleotide pyrophosphatase YP_014035.1 1428016 R 265669 CDS YP_014036.1 46907647 2799315 complement(1429348..1430385) 1 NC_002973.6 identified by match to protein family HMM PF01594; hypothetical protein 1430385 2799315 LMOf2365_1438 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014036.1 1429348 R 265669 CDS YP_014037.1 46907648 2799516 complement(1430402..1431298) 1 NC_002973.6 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1431298 murB 2799516 murB Listeria monocytogenes serotype 4b str. F2365 UDP-N-acetylenolpyruvoylglucosamine reductase YP_014037.1 1430402 R 265669 CDS YP_014038.1 46907649 2799422 1431514..1432500 1 NC_002973.6 identified by similarity to SP:O34992; match to protein family HMM PF00005; match to protein family HMM TIGR01186; glycine betaine/L-proline ABC transporter ATP-binding protein 1432500 2799422 LMOf2365_1440 Listeria monocytogenes serotype 4b str. F2365 glycine betaine/L-proline ABC transporter ATP-binding protein YP_014038.1 1431514 D 265669 CDS YP_014039.1 46907650 2798918 1432497..1434011 1 NC_002973.6 identified by similarity to SP:O32243; match to protein family HMM PF00528; match to protein family HMM PF04069; glycine betaine/proline ABC transporter permease/substrate-binding protein 1434011 2798918 LMOf2365_1441 Listeria monocytogenes serotype 4b str. F2365 glycine betaine/proline ABC transporter permease/substrate-binding protein YP_014039.1 1432497 D 265669 CDS YP_014040.1 46907651 2797421 complement(1434047..1434877) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1451; hypothetical protein 1434877 2797421 LMOf2365_1442 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014040.1 1434047 R 265669 CDS YP_014041.1 46907652 2798058 complement(1435016..1436362) 1 NC_002973.6 identified by match to protein family HMM PF01566; match to protein family HMM TIGR01197; manganese transport protein MntH 1436362 2798058 LMOf2365_1443 Listeria monocytogenes serotype 4b str. F2365 manganese transport protein MntH YP_014041.1 1435016 R 265669 CDS YP_014042.1 46907653 2797366 complement(1436475..1437146) 1 NC_002973.6 identified by similarity to SP:O34742; match to protein family HMM PF00528; glycine betaine/L-proline ABC transporter permease 1437146 opuCD 2797366 opuCD Listeria monocytogenes serotype 4b str. F2365 glycine betaine/L-proline ABC transporter permease YP_014042.1 1436475 R 265669 CDS YP_014043.1 46907654 2799451 complement(1437161..1438087) 1 NC_002973.6 identified by similarity to SP:O32243; match to protein family HMM PF04069; glycine betaine/L-proline ABC transporter substrate-binding protein 1438087 opuCC 2799451 opuCC Listeria monocytogenes serotype 4b str. F2365 glycine betaine/L-proline ABC transporter substrate-binding protein YP_014043.1 1437161 R 265669 CDS YP_014044.1 46907655 2799614 complement(1438089..1438745) 1 NC_002973.6 identified by similarity to GP:12003349; match to protein family HMM PF00528; glycine betaine/L-proline ABC transporter permease 1438745 opuCB 2799614 opuCB Listeria monocytogenes serotype 4b str. F2365 glycine betaine/L-proline ABC transporter permease YP_014044.1 1438089 R 265669 CDS YP_014045.1 46907656 2798984 complement(1438749..1439942) 1 NC_002973.6 identified by similarity to SP:O34992; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186; glycine betaine/L-proline ABC transporter ATP-binding protein 1439942 opuCA 2798984 opuCA Listeria monocytogenes serotype 4b str. F2365 glycine betaine/L-proline ABC transporter ATP-binding protein YP_014045.1 1438749 R 265669 CDS YP_014046.1 46907657 2799044 complement(1440235..1440795) 1 NC_002973.6 hypothetical protein 1440795 2799044 LMOf2365_1448 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014046.1 1440235 R 265669 CDS YP_014047.1 46907658 2798200 complement(1441043..1441426) 1 NC_002973.6 identified by similarity to GP:16501831; match to protein family HMM PF04237; hypothetical protein 1441426 2798200 LMOf2365_1449 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014047.1 1441043 R 265669 CDS YP_014048.1 46907659 2799708 1441566..1443167 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1443167 2799708 LMOf2365_1450 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_014048.1 1441566 D 265669 CDS YP_014049.1 46907660 2798369 complement(1443206..1443856) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1460; hypothetical protein 1443856 2798369 LMOf2365_1451 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014049.1 1443206 R 265669 CDS YP_014050.1 46907661 2799025 complement(1443909..1445249) 1 NC_002973.6 identified by match to protein family HMM PF00070; match to protein family HMM PF02852; pyridine nucleotide-disulfide oxidoreductase 1445249 2799025 LMOf2365_1452 Listeria monocytogenes serotype 4b str. F2365 pyridine nucleotide-disulfide oxidoreductase YP_014050.1 1443909 R 265669 CDS YP_014051.1 46907662 2799743 complement(1445338..1447005) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1462; match to protein family HMM PF00753; match to protein family HMM TIGR00649; metallo-beta-lactamase 1447005 2799743 LMOf2365_1453 Listeria monocytogenes serotype 4b str. F2365 metallo-beta-lactamase YP_014051.1 1445338 R 265669 CDS YP_014052.1 46907663 2799279 complement(1447025..1447906) 1 NC_002973.6 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1447906 dapA 2799279 dapA Listeria monocytogenes serotype 4b str. F2365 dihydrodipicolinate synthase YP_014052.1 1447025 R 265669 CDS YP_014053.1 46907664 2799740 complement(1447921..1449132) 1 NC_002973.6 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive; aspartate kinase I 1449132 2799740 LMOf2365_1455 Listeria monocytogenes serotype 4b str. F2365 aspartate kinase I YP_014053.1 1447921 R 265669 CDS YP_014054.1 46907665 2798644 complement(1449144..1450187) 1 NC_002973.6 identified by similarity to SP:Q04797; match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01296; aspartate-semialdehyde dehydrogenase 1450187 asd 2798644 asd Listeria monocytogenes serotype 4b str. F2365 aspartate-semialdehyde dehydrogenase YP_014054.1 1449144 R 265669 CDS YP_014055.1 46907666 2799245 complement(1450385..1452550) 1 NC_002973.6 identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein 1452550 2799245 LMOf2365_1457 Listeria monocytogenes serotype 4b str. F2365 penicillin-binding protein YP_014055.1 1450385 R 265669 CDS YP_014056.1 46907667 2799594 complement(1452680..1453288) 1 NC_002973.6 identified by similarity to SP:P28764; match to protein family HMM PF00081; match to protein family HMM PF02777; superoxide dismutase 1453288 sod 2799594 sod Listeria monocytogenes serotype 4b str. F2365 superoxide dismutase YP_014056.1 1452680 R 265669 CDS YP_014057.1 46907668 2799298 1453590..1454390 1 NC_002973.6 hypothetical protein 1454390 2799298 LMOf2365_1459 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014057.1 1453590 D 265669 CDS YP_014058.1 46907669 2799072 1454502..1455608 1 NC_002973.6 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1455608 ispG 2799072 ispG Listeria monocytogenes serotype 4b str. F2365 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_014058.1 1454502 D 265669 CDS YP_014059.1 46907670 2797055 1455644..1456351 1 NC_002973.6 identified by match to protein family HMM PF03591; AzlC family protein 1456351 2797055 LMOf2365_1461 Listeria monocytogenes serotype 4b str. F2365 AzlC family protein YP_014059.1 1455644 D 265669 CDS YP_014060.1 46907671 2797959 1456342..1456668 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1470; match to protein family HMM PF06063; hypothetical protein 1456668 2797959 LMOf2365_1462 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014060.1 1456342 D 265669 CDS YP_014061.1 46907672 2798683 complement(1456750..1457634) 1 NC_002973.6 identified by similarity to SP:P24327; match to protein family HMM PF00639; protein export protein 1457634 prsA-1 2798683 prsA-1 Listeria monocytogenes serotype 4b str. F2365 protein export protein YP_014061.1 1456750 R 265669 CDS YP_014062.1 46907673 2797233 complement(1457769..1458194) 1 NC_002973.6 identified by similarity to SP:Q9XDA4; match to protein family HMM PF01475; ZurR family transcriptional regulator 1458194 zurR 2797233 zurR Listeria monocytogenes serotype 4b str. F2365 ZurR family transcriptional regulator YP_014062.1 1457769 R 265669 CDS YP_014063.1 46907674 2797451 complement(1458175..1459062) 1 NC_002973.6 identified by similarity to GP:5019735; match to protein family HMM PF00950; zinc ABC transporter permease 1459062 zurM-2 2797451 zurM-2 Listeria monocytogenes serotype 4b str. F2365 zinc ABC transporter permease YP_014063.1 1458175 R 265669 CDS YP_014064.1 46907675 2798490 complement(1459028..1459801) 1 NC_002973.6 identified by similarity to SP:Q9XDA6; match to protein family HMM PF00005; zinc ABC transporter ATP-binding protein 1459801 zurA-2 2798490 zurA-2 Listeria monocytogenes serotype 4b str. F2365 zinc ABC transporter ATP-binding protein YP_014064.1 1459028 R 265669 CDS YP_014065.1 46907676 2798347 complement(1459946..1460872) 1 NC_002973.6 catalyzes the hydrolysis of pyrophosphate to phosphate; manganese-dependent inorganic pyrophosphatase 1460872 ppaC 2798347 ppaC Listeria monocytogenes serotype 4b str. F2365 manganese-dependent inorganic pyrophosphatase YP_014065.1 1459946 R 265669 CDS YP_014066.1 46907677 2799083 complement(1460889..1461782) 1 NC_002973.6 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 1461782 nfo 2799083 nfo Listeria monocytogenes serotype 4b str. F2365 endonuclease IV YP_014066.1 1460889 R 265669 CDS YP_014067.1 46907678 2799101 complement(1461798..1463105) 1 NC_002973.6 identified by similarity to SP:P42305; match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent RNA helicase 1463105 2799101 LMOf2365_1469 Listeria monocytogenes serotype 4b str. F2365 ATP-dependent RNA helicase YP_014067.1 1461798 R 265669 CDS YP_014068.1 46907679 2799764 1463251..1464246 1 NC_002973.6 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1464246 ispH 2799764 ispH Listeria monocytogenes serotype 4b str. F2365 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_014068.1 1463251 D 265669 CDS YP_014069.1 46907680 2799252 complement(1464292..1465413) 1 NC_002973.6 identified by similarity to SP:Q92BQ8; match to protein family HMM PF01784; match to protein family HMM TIGR00486; hypothetical protein 1465413 2799252 LMOf2365_1471 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014069.1 1464292 R 265669 CDS YP_014070.1 46907681 2797931 complement(1465410..1466132) 1 NC_002973.6 identified by similarity to OMNI:EF1380; match to protein family HMM PF04816; hypothetical protein 1466132 2797931 LMOf2365_1472 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014070.1 1465410 R 265669 CDS YP_014071.1 46907682 2799033 complement(1466182..1467306) 1 NC_002973.6 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; primary sigma factor of bacterium; RNA polymerase sigma factor RpoD 1467306 rpoD 2799033 rpoD Listeria monocytogenes serotype 4b str. F2365 RNA polymerase sigma factor RpoD YP_014071.1 1466182 R 265669 CDS YP_014072.1 46907683 2798991 complement(1467401..1469281) 1 NC_002973.6 identified by similarity to SP:P47762; match to protein family HMM PF01751; match to protein family HMM PF01807; match to protein family HMM TIGR01391; DNA primase 1469281 dnaG 2798991 dnaG Listeria monocytogenes serotype 4b str. F2365 DNA primase YP_014072.1 1467401 R 265669 CDS YP_014073.1 46907684 2799433 complement(1469301..1469741) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1482; match to protein family HMM PF02639; hypothetical protein 1469741 2799433 LMOf2365_1475 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014073.1 1469301 R 265669 CDS YP_014074.1 46907685 2798100 complement(1469929..1470753) 1 NC_002973.6 identified by match to protein family HMM PF03618; hypothetical protein 1470753 2798100 LMOf2365_1476 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014074.1 1469929 R 265669 CDS YP_014075.1 46907686 2798114 complement(1470788..1472854) 1 NC_002973.6 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 1472854 glyS 2798114 glyS Listeria monocytogenes serotype 4b str. F2365 glycyl-tRNA synthetase subunit beta YP_014075.1 1470788 R 265669 CDS YP_014076.1 46907687 2798078 complement(1472847..1473737) 1 NC_002973.6 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 1473737 glyQ 2798078 glyQ Listeria monocytogenes serotype 4b str. F2365 glycyl-tRNA synthetase subunit alpha YP_014076.1 1472847 R 265669 CDS YP_014077.1 46907688 2799412 complement(1474020..1474787) 1 NC_002973.6 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 1474787 recO 2799412 recO Listeria monocytogenes serotype 4b str. F2365 DNA repair protein RecO YP_014077.1 1474020 R 265669 CDS YP_014078.1 46907689 2798975 1474833..1475552 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1487; hypothetical protein 1475552 2798975 LMOf2365_1480 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014078.1 1474833 D 265669 CDS YP_014079.1 46907690 2797372 complement(1475599..1476504) 1 NC_002973.6 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 1476504 era 2797372 era Listeria monocytogenes serotype 4b str. F2365 GTP-binding protein Era YP_014079.1 1475599 R 265669 CDS YP_014080.1 46907691 2799010 complement(1476501..1476896) 1 NC_002973.6 identified by match to protein family HMM PF00383; match to protein family HMM TIGR01354; cytidine deaminase 1476896 cdd 2799010 cdd Listeria monocytogenes serotype 4b str. F2365 cytidine deaminase YP_014080.1 1476501 R 265669 CDS YP_014081.1 46907692 2797380 complement(1476921..1477316) 1 NC_002973.6 identified by similarity to SP:Q05888; match to protein family HMM PF01219; diacylglycerol kinase 1477316 dgkA 2797380 dgkA Listeria monocytogenes serotype 4b str. F2365 diacylglycerol kinase YP_014081.1 1476921 R 265669 CDS YP_014082.1 46907693 2799410 complement(1477294..1477779) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1491; match to protein family HMM PF02130; match to protein family HMM TIGR00043; metalloprotease 1477779 2799410 LMOf2365_1484 Listeria monocytogenes serotype 4b str. F2365 metalloprotease YP_014082.1 1477294 R 265669 CDS YP_014083.1 46907694 2798728 complement(1477796..1479952) 1 NC_002973.6 identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; HDIG domain-containing protein 1479952 2798728 LMOf2365_1485 Listeria monocytogenes serotype 4b str. F2365 HDIG domain-containing protein YP_014083.1 1477796 R 265669 CDS YP_014084.1 46907695 2798797 complement(1479968..1480927) 1 NC_002973.6 identified by match to protein family HMM PF02562; PhoH family protein 1480927 2798797 LMOf2365_1486 Listeria monocytogenes serotype 4b str. F2365 PhoH family protein YP_014084.1 1479968 R 265669 CDS YP_014085.1 46907696 2798685 complement(1481115..1481570) 1 NC_002973.6 identified by similarity to GP:10173971; match to protein family HMM PF02637; GatB/Yqey domain-containing protein 1481570 2798685 LMOf2365_1487 Listeria monocytogenes serotype 4b str. F2365 GatB/Yqey domain-containing protein YP_014085.1 1481115 R 265669 CDS YP_014086.1 46907697 2799647 complement(1481581..1481754) 1 NC_002973.6 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1481754 rpsU 2799647 rpsU Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S21 YP_014086.1 1481581 R 265669 CDS YP_014087.1 46907698 2798672 complement(1481952..1482719) 1 NC_002973.6 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 1482719 2798672 LMOf2365_1489 Listeria monocytogenes serotype 4b str. F2365 16S ribosomal RNA methyltransferase RsmE YP_014087.1 1481952 R 265669 CDS YP_014088.1 46907699 2798351 complement(1482720..1483664) 1 NC_002973.6 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 1483664 prmA 2798351 prmA Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L11 methyltransferase YP_014088.1 1482720 R 265669 CDS YP_014089.1 46907700 2798693 complement(1483736..1484866) 1 NC_002973.6 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 1484866 dnaJ 2798693 dnaJ Listeria monocytogenes serotype 4b str. F2365 chaperone protein DnaJ YP_014089.1 1483736 R 265669 CDS YP_014090.1 46907701 2798356 complement(1485008..1486849) 1 NC_002973.6 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 1486849 dnaK 2798356 dnaK Listeria monocytogenes serotype 4b str. F2365 molecular chaperone DnaK YP_014090.1 1485008 R 265669 CDS YP_014091.1 46907702 2797912 complement(1486883..1487458) 1 NC_002973.6 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 1487458 grpE 2797912 grpE Listeria monocytogenes serotype 4b str. F2365 heat shock protein GrpE YP_014091.1 1486883 R 265669 CDS YP_014092.1 46907703 2797153 complement(1487500..1488537) 1 NC_002973.6 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 1488537 hrcA 2797153 hrcA Listeria monocytogenes serotype 4b str. F2365 heat-inducible transcription repressor YP_014092.1 1487500 R 265669 CDS YP_014093.1 46907704 2798408 complement(1488684..1489841) 1 NC_002973.6 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1489841 2798408 LMOf2365_1495 Listeria monocytogenes serotype 4b str. F2365 coproporphyrinogen III oxidase YP_014093.1 1488684 R 265669 CDS YP_014094.1 46907705 2797765 complement(1489930..1490958) 1 NC_002973.6 identified by similarity to OMNI:NTL01SA0329; hypothetical protein 1490958 2797765 LMOf2365_1496 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014094.1 1489930 R 265669 CDS YP_014095.1 46907706 2797738 1491071..1491508 1 NC_002973.6 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 1491508 2797738 LMOf2365_1497 Listeria monocytogenes serotype 4b str. F2365 MerR family transcriptional regulator YP_014095.1 1491071 D 265669 CDS YP_014096.1 46907707 2797755 complement(1491554..1493380) 1 NC_002973.6 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1493380 lepA 2797755 lepA Listeria monocytogenes serotype 4b str. F2365 GTP-binding protein LepA YP_014096.1 1491554 R 265669 CDS YP_014097.1 46907708 2797817 1493625..1493879 1 NC_002973.6 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1493879 rpsT 2797817 rpsT Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S20 YP_014097.1 1493625 D 265669 CDS YP_014098.1 46907709 2797826 complement(1493965..1494996) 1 NC_002973.6 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 1494996 holA 2797826 holA Listeria monocytogenes serotype 4b str. F2365 DNA polymerase III subunit delta YP_014098.1 1493965 R 265669 CDS YP_014099.1 46907710 2797734 complement(1495064..1497223) 1 NC_002973.6 identified by similarity to SP:P39695; match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361; comEC/Rec2 family protein 1497223 2797734 LMOf2365_1501 Listeria monocytogenes serotype 4b str. F2365 comEC/Rec2 family protein YP_014099.1 1495064 R 265669 CDS YP_014100.1 46907711 2797855 complement(1497321..1497881) 1 NC_002973.6 identified by similarity to SP:P32393; match to protein family HMM PF00383; zinc-binding protein ComEB 1497881 2797855 LMOf2365_1502 Listeria monocytogenes serotype 4b str. F2365 zinc-binding protein ComEB YP_014100.1 1497321 R 265669 CDS YP_014101.1 46907712 2797813 complement(1497953..1498588) 1 NC_002973.6 identified by similarity to SP:P39694; match to protein family HMM PF00633; match to protein family HMM TIGR00426; DNA-binding protein ComEA 1498588 2797813 LMOf2365_1503 Listeria monocytogenes serotype 4b str. F2365 DNA-binding protein ComEA YP_014101.1 1497953 R 265669 CDS YP_014102.1 46907713 2799487 complement(1498658..1499389) 1 NC_002973.6 hypothetical protein 1499389 2799487 LMOf2365_1504 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014102.1 1498658 R 265669 CDS YP_014103.1 46907714 2797694 complement(1499445..1499801) 1 NC_002973.6 iojap family protein 1499801 2797694 LMOf2365_1505 Listeria monocytogenes serotype 4b str. F2365 iojap family protein YP_014103.1 1499445 R 265669 CDS YP_014104.1 46907715 2797698 complement(1499806..1500381) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1511; match to protein family HMM PF01966; match to protein family HMM TIGR00488; hypothetical protein 1500381 2797698 LMOf2365_1506 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014104.1 1499806 R 265669 CDS YP_014105.1 46907716 2797794 complement(1500368..1500934) 1 NC_002973.6 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 1500934 nadD 2797794 nadD Listeria monocytogenes serotype 4b str. F2365 nicotinic acid mononucleotide adenylyltransferase YP_014105.1 1500368 R 265669 CDS YP_014106.1 46907717 2797790 complement(1500952..1501242) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1513; match to protein family HMM PF01985; match to protein family HMM TIGR00253; hypothetical protein 1501242 2797790 LMOf2365_1508 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014106.1 1500952 R 265669 CDS YP_014107.1 46907718 2797703 complement(1501242..1502063) 1 NC_002973.6 identified by similarity to SP:P54374; match to protein family HMM PF01488; match to protein family HMM TIGR00507; shikimate 5-dehydrogenase 1502063 aroE-2 2797703 aroE-2 Listeria monocytogenes serotype 4b str. F2365 shikimate 5-dehydrogenase YP_014107.1 1501242 R 265669 CDS YP_014108.1 46907719 2797679 complement(1502083..1503183) 1 NC_002973.6 in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis; GTP-binding protein YqeH 1503183 2797679 LMOf2365_1510 Listeria monocytogenes serotype 4b str. F2365 GTP-binding protein YqeH YP_014108.1 1502083 R 265669 CDS YP_014109.1 46907720 2798483 complement(1503180..1503701) 1 NC_002973.6 identified by match to protein family HMM TIGR01662; match to protein family HMM TIGR01668; hypothetical protein 1503701 2798483 LMOf2365_1511 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014109.1 1503180 R 265669 CDS YP_014110.1 46907721 2797896 1503863..1505671 1 NC_002973.6 identified by match to protein family HMM PF01432; M3 family peptidase 1505671 2797896 LMOf2365_1512 Listeria monocytogenes serotype 4b str. F2365 M3 family peptidase YP_014110.1 1503863 D 265669 CDS YP_014111.1 46907722 2798193 complement(1505707..1506408) 1 NC_002973.6 identified by similarity to SP:P24247; match to protein family HMM PF01048; match to protein family HMM TIGR01704; MTA/SAH nucleosidase 1506408 2798193 LMOf2365_1513 Listeria monocytogenes serotype 4b str. F2365 MTA/SAH nucleosidase YP_014111.1 1505707 R 265669 CDS YP_014112.1 46907723 2798506 complement(1506458..1507081) 1 NC_002973.6 hypothetical protein 1507081 2798506 LMOf2365_1514 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014112.1 1506458 R 265669 CDS YP_014113.1 46907724 2798232 complement(1507132..1507614) 1 NC_002973.6 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1507614 greA 2798232 greA Listeria monocytogenes serotype 4b str. F2365 transcription elongation factor GreA YP_014113.1 1507132 R 265669 CDS YP_014114.1 46907725 2798417 complement(1507808..1508437) 1 NC_002973.6 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 1508437 udk 2798417 udk Listeria monocytogenes serotype 4b str. F2365 uridine kinase YP_014114.1 1507808 R 265669 CDS YP_014115.1 46907726 2798527 complement(1508434..1509087) 1 NC_002973.6 identified by match to protein family HMM PF01596; O-methyltransferase 1509087 2798527 LMOf2365_1517 Listeria monocytogenes serotype 4b str. F2365 O-methyltransferase YP_014115.1 1508434 R 265669 CDS YP_014116.1 46907727 2798524 complement(1509163..1510233) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1523; match to protein family HMM PF02618; match to protein family HMM TIGR00247; hypothetical protein 1510233 2798524 LMOf2365_1518 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014116.1 1509163 R 265669 CDS YP_014117.1 46907728 2798585 1510436..1511062 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1524; match to protein family HMM PF00597; DedA family protein 1511062 2798585 LMOf2365_1519 Listeria monocytogenes serotype 4b str. F2365 DedA family protein YP_014117.1 1510436 D 265669 CDS YP_014118.1 46907729 2798548 complement(1511108..1511410) 1 NC_002973.6 hypothetical protein 1511410 2798548 LMOf2365_1520 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014118.1 1511108 R 265669 CDS YP_014119.1 46907730 2798572 complement(1511426..1511842) 1 NC_002973.6 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 1511842 2798572 LMOf2365_1521 Listeria monocytogenes serotype 4b str. F2365 Holliday junction resolvase-like protein YP_014119.1 1511426 R 265669 CDS YP_014120.1 46907731 2798676 complement(1511839..1512111) 1 NC_002973.6 identified by similarity to OMNI:EF1202; match to protein family HMM PF06135; hypothetical protein 1512111 2798676 LMOf2365_1522 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014120.1 1511839 R 265669 CDS YP_014121.1 46907732 2798574 complement(1512203..1514842) 1 NC_002973.6 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1514842 alaS 2798574 alaS Listeria monocytogenes serotype 4b str. F2365 alanyl-tRNA synthetase YP_014121.1 1512203 R 265669 CDS YP_014122.1 46907733 2798648 complement(1515149..1515844) 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1515844 2798648 LMOf2365_1524 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_014122.1 1515149 R 265669 CDS YP_014123.1 46907734 2798649 complement(1515853..1517352) 1 NC_002973.6 identified by match to protein family HMM PF02687; ABC transporter permease 1517352 2798649 LMOf2365_1525 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_014123.1 1515853 R 265669 CDS YP_014124.1 46907735 2798801 1517519..1518205 1 NC_002973.6 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1518205 2798801 LMOf2365_1526 Listeria monocytogenes serotype 4b str. F2365 DNA-binding response regulator YP_014124.1 1517519 D 265669 CDS YP_014125.1 46907736 2798705 1518211..1519641 1 NC_002973.6 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 1519641 2798705 LMOf2365_1527 Listeria monocytogenes serotype 4b str. F2365 sensor histidine kinase YP_014125.1 1518211 D 265669 CDS YP_014126.1 46907737 2798731 complement(1519683..1522079) 1 NC_002973.6 identified by match to protein family HMM TIGR01448; recombinase D 1522079 2798731 LMOf2365_1528 Listeria monocytogenes serotype 4b str. F2365 recombinase D YP_014126.1 1519683 R 265669 CDS YP_014127.1 46907738 2797645 complement(1522107..1522775) 1 NC_002973.6 identified by match to protein family HMM PF00515; hypothetical protein 1522775 2797645 LMOf2365_1529 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014127.1 1522107 R 265669 CDS YP_014128.1 46907739 2799541 complement(1522786..1523526) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1535; hypothetical protein 1523526 2799541 LMOf2365_1530 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014128.1 1522786 R 265669 CDS YP_014129.1 46907740 2798661 complement(1523645..1524760) 1 NC_002973.6 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1524760 mnmA 2798661 mnmA Listeria monocytogenes serotype 4b str. F2365 tRNA-specific 2-thiouridylase MnmA YP_014129.1 1523645 R 265669 CDS YP_014130.1 46907741 2797884 complement(1524779..1525927) 1 NC_002973.6 identified by similarity to SP:P57795; match to protein family HMM PF00266; carbon-sulfur lyase 1525927 2797884 LMOf2365_1532 Listeria monocytogenes serotype 4b str. F2365 carbon-sulfur lyase YP_014130.1 1524779 R 265669 CDS YP_014131.1 46907742 2797899 complement(1526308..1527591) 1 NC_002973.6 identified by match to protein family HMM PF00004; recombination factor protein RarA 1527591 2797899 LMOf2365_1533 Listeria monocytogenes serotype 4b str. F2365 recombination factor protein RarA YP_014131.1 1526308 R 265669 CDS YP_014132.1 46907743 2798262 1527740..1528162 1 NC_002973.6 identified by similarity to OMNI:SA1681; match to protein family HMM PF02082; match to protein family HMM TIGR00738; Rrf2 family protein 1528162 2798262 LMOf2365_1534 Listeria monocytogenes serotype 4b str. F2365 Rrf2 family protein YP_014132.1 1527740 D 265669 CDS YP_014133.1 46907744 2798186 1528407..1529612 1 NC_002973.6 identified by similarity to SP:Q07429; match to protein family HMM PF00909; match to protein family HMM TIGR00836; ammonium transporter 1529612 2798186 LMOf2365_1535 Listeria monocytogenes serotype 4b str. F2365 ammonium transporter YP_014133.1 1528407 D 265669 CDS YP_014134.1 46907745 2798158 1529626..1529991 1 NC_002973.6 identified by similarity to SP:Q07428; match to protein family HMM PF00543; nitrogen regulatory protein P-II 1529991 2798158 LMOf2365_1536 Listeria monocytogenes serotype 4b str. F2365 nitrogen regulatory protein P-II YP_014134.1 1529626 D 265669 CDS YP_014135.1 46907746 2798286 1530141..1530521 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1542; hypothetical protein 1530521 2798286 LMOf2365_1537 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014135.1 1530141 D 265669 CDS YP_014136.1 46907747 2797909 complement(1530561..1532336) 1 NC_002973.6 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 1532336 aspS 2797909 aspS Listeria monocytogenes serotype 4b str. F2365 aspartyl-tRNA synthetase YP_014136.1 1530561 R 265669 CDS YP_014137.1 46907748 2797903 complement(1532338..1533615) 1 NC_002973.6 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1533615 hisS 2797903 hisS Listeria monocytogenes serotype 4b str. F2365 histidyl-tRNA synthetase YP_014137.1 1532338 R 265669 CDS YP_014138.1 46907749 2797893 1534066..1535349 1 NC_002973.6 identified by match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase 1535349 ami 2797893 ami Listeria monocytogenes serotype 4b str. F2365 N-acetylmuramoyl-L-alanine amidase YP_014138.1 1534066 D 265669 CDS YP_014139.1 46907750 2797894 complement(1535387..1535839) 1 NC_002973.6 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 1535839 dtd 2797894 dtd Listeria monocytogenes serotype 4b str. F2365 D-tyrosyl-tRNA(Tyr) deacylase YP_014139.1 1535387 R 265669 CDS YP_014140.1 46907751 2797870 complement(1535855..1538071) 1 NC_002973.6 identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; GTP pyrophosphokinase 1538071 relA 2797870 relA Listeria monocytogenes serotype 4b str. F2365 GTP pyrophosphokinase YP_014140.1 1535855 R 265669 CDS YP_014141.1 46907752 2797856 complement(1538277..1538798) 1 NC_002973.6 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1538798 apt 2797856 apt Listeria monocytogenes serotype 4b str. F2365 adenine phosphoribosyltransferase YP_014141.1 1538277 R 265669 CDS YP_014142.1 46907753 2799522 complement(1538788..1541139) 1 NC_002973.6 identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644; single-stranded-DNA-specific exonuclease RecJ 1541139 recJ 2799522 recJ Listeria monocytogenes serotype 4b str. F2365 single-stranded-DNA-specific exonuclease RecJ YP_014142.1 1538788 R 265669 CDS YP_014143.1 46907754 2799523 complement(1541244..1541588) 1 NC_002973.6 hypothetical protein 1541588 2799523 LMOf2365_1545 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014143.1 1541244 R 265669 CDS YP_014144.1 46907755 2797676 complement(1541686..1543950) 1 NC_002973.6 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; bifunctional preprotein translocase subunit SecD/SecF 1543950 secDF 2797676 secDF Listeria monocytogenes serotype 4b str. F2365 bifunctional preprotein translocase subunit SecD/SecF YP_014144.1 1541686 R 265669 CDS YP_014145.1 46907756 2797784 complement(1544051..1544341) 1 NC_002973.6 hypothetical protein 1544341 2797784 LMOf2365_1547 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014145.1 1544051 R 265669 CDS YP_014146.1 46907757 2797785 complement(1544484..1544813) 1 NC_002973.6 identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739; preprotein translocase subunit YajC 1544813 yajC 2797785 yajC Listeria monocytogenes serotype 4b str. F2365 preprotein translocase subunit YajC YP_014146.1 1544484 R 265669 CDS YP_014147.1 46907758 2799109 complement(1544847..1545986) 1 NC_002973.6 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1545986 tgt 2799109 tgt Listeria monocytogenes serotype 4b str. F2365 queuine tRNA-ribosyltransferase YP_014147.1 1544847 R 265669 CDS YP_014148.1 46907759 2797673 complement(1546073..1547101) 1 NC_002973.6 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1547101 queA 2797673 queA Listeria monocytogenes serotype 4b str. F2365 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_014148.1 1546073 R 265669 CDS YP_014149.1 46907760 2797674 complement(1547105..1548112) 1 NC_002973.6 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1548112 ruvB 2797674 ruvB Listeria monocytogenes serotype 4b str. F2365 Holliday junction DNA helicase RuvB YP_014149.1 1547105 R 265669 CDS YP_014150.1 46907761 2799265 complement(1548128..1548733) 1 NC_002973.6 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 1548733 ruvA 2799265 ruvA Listeria monocytogenes serotype 4b str. F2365 Holliday junction DNA helicase RuvA YP_014150.1 1548128 R 265669 CDS YP_014151.1 46907762 2799266 complement(1548857..1549792) 1 NC_002973.6 identified by similarity to SP:P14561; match to protein family HMM PF00056; match to protein family HMM PF02866; match to protein family HMM TIGR01771; L-lactate dehydrogenase 1549792 ldh-2 2799266 ldh-2 Listeria monocytogenes serotype 4b str. F2365 L-lactate dehydrogenase YP_014151.1 1548857 R 265669 CDS YP_014152.1 46907763 2797861 complement(1549862..1550587) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1559; match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein 1550587 2797861 LMOf2365_1554 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014152.1 1549862 R 265669 CDS YP_014153.1 46907764 2799157 complement(1550698..1551546) 1 NC_002973.6 catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase 1551546 pheA 2799157 pheA Listeria monocytogenes serotype 4b str. F2365 prephenate dehydratase YP_014153.1 1550698 R 265669 CDS YP_014154.1 46907765 2799273 complement(1551613..1552902) 1 NC_002973.6 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1552902 obgE 2799273 obgE Listeria monocytogenes serotype 4b str. F2365 GTPase ObgE YP_014154.1 1551613 R 265669 CDS YP_014155.1 46907766 2798813 complement(1553061..1554554) 1 NC_002973.6 Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 1554554 glpK 2798813 glpK Listeria monocytogenes serotype 4b str. F2365 glycerol kinase YP_014155.1 1553061 R 265669 CDS YP_014156.1 46907767 2798806 complement(1554629..1555447) 1 NC_002973.6 identified by similarity to SP:P18156; match to protein family HMM PF00230; match to protein family HMM TIGR00861; glycerol uptake facilitator protein 1555447 glpF-2 2798806 glpF-2 Listeria monocytogenes serotype 4b str. F2365 glycerol uptake facilitator protein YP_014156.1 1554629 R 265669 CDS YP_014157.1 46907768 2799145 complement(1555813..1556103) 1 NC_002973.6 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1556103 rpmA 2799145 rpmA Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L27 YP_014157.1 1555813 R 265669 CDS YP_014158.1 46907769 2798756 complement(1556117..1556434) 1 NC_002973.6 identified by match to protein family HMM PF04327; hypothetical protein 1556434 2798756 LMOf2365_1560 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014158.1 1556117 R 265669 CDS YP_014159.1 46907770 2798779 complement(1556453..1556761) 1 NC_002973.6 identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 1556761 rplU 2798779 rplU Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L21 YP_014159.1 1556453 R 265669 CDS YP_014160.1 46907771 2798768 complement(1556918..1558279) 1 NC_002973.6 identified by match to protein family HMM PF00575; ribonuclease 1558279 2798768 LMOf2365_1562 Listeria monocytogenes serotype 4b str. F2365 ribonuclease YP_014160.1 1556918 R 265669 CDS YP_014161.1 46907772 2798769 complement(1558332..1559132) 1 NC_002973.6 identified by similarity to SP:Q01464; match to protein family HMM PF00991; match to protein family HMM TIGR01968; septum site-determining protein MinD 1559132 minD 2798769 minD Listeria monocytogenes serotype 4b str. F2365 septum site-determining protein MinD YP_014161.1 1558332 R 265669 CDS YP_014162.1 46907773 2798746 complement(1559135..1559812) 1 NC_002973.6 blocks the formation of polar Z-ring septums; septum formation inhibitor 1559812 minC 2798746 minC Listeria monocytogenes serotype 4b str. F2365 septum formation inhibitor YP_014162.1 1559135 R 265669 CDS YP_014163.1 46907774 2798718 complement(1559990..1560508) 1 NC_002973.6 identified by similarity to SP:Q01467; match to protein family HMM PF04093; cell shape-determining protein MreD 1560508 mreD 2798718 mreD Listeria monocytogenes serotype 4b str. F2365 cell shape-determining protein MreD YP_014163.1 1559990 R 265669 CDS YP_014164.1 46907775 2798688 complement(1560511..1561398) 1 NC_002973.6 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 1561398 mreC 2798688 mreC Listeria monocytogenes serotype 4b str. F2365 rod shape-determining protein MreC YP_014164.1 1560511 R 265669 CDS YP_014165.1 46907776 2798689 complement(1561484..1562497) 1 NC_002973.6 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 1562497 mreB 2798689 mreB Listeria monocytogenes serotype 4b str. F2365 rod shape-determining protein MreB YP_014165.1 1561484 R 265669 CDS YP_014166.1 46907777 2798668 complement(1562752..1562859) 1 NC_002973.6 hypothetical protein 1562859 2798668 LMOf2365_1568 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014166.1 1562752 R 265669 CDS YP_014167.1 46907778 2798669 complement(1562949..1563623) 1 NC_002973.6 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 1563623 radC 2798669 radC Listeria monocytogenes serotype 4b str. F2365 DNA repair protein RadC YP_014167.1 1562949 R 265669 CDS YP_014168.1 46907779 2798653 complement(1563635..1564345) 1 NC_002973.6 identified by similarity to SP:P15378; match to protein family HMM PF01478; type IV leader peptidase 1564345 2798653 LMOf2365_1570 Listeria monocytogenes serotype 4b str. F2365 type IV leader peptidase YP_014168.1 1563635 R 265669 CDS YP_014169.1 46907780 2798654 complement(1564425..1564532) 1 NC_002973.6 hypothetical protein 1564532 2798654 LMOf2365_1571 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014169.1 1564425 R 265669 CDS YP_014170.1 46907781 2798635 complement(1564557..1565846) 1 NC_002973.6 identified by similarity to SP:Q05865; match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM TIGR01499; folylpolyglutamate synthase 1565846 folC 2798635 folC Listeria monocytogenes serotype 4b str. F2365 folylpolyglutamate synthase YP_014170.1 1564557 R 265669 CDS YP_014171.1 46907782 2798631 complement(1565908..1568559) 1 NC_002973.6 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 1568559 valS 2798631 valS Listeria monocytogenes serotype 4b str. F2365 valyl-tRNA synthetase YP_014171.1 1565908 R 265669 CDS YP_014172.1 46907783 2798616 complement(1568883..1570172) 1 NC_002973.6 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 1570172 hemL 2798616 hemL Listeria monocytogenes serotype 4b str. F2365 glutamate-1-semialdehyde aminotransferase YP_014172.1 1568883 R 265669 CDS YP_014173.1 46907784 2798617 complement(1570185..1571159) 1 NC_002973.6 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1571159 hemB 2798617 hemB Listeria monocytogenes serotype 4b str. F2365 delta-aminolevulinic acid dehydratase YP_014173.1 1570185 R 265669 CDS YP_014174.1 46907785 2798608 complement(1571156..1571878) 1 NC_002973.6 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 1571878 hemD 2798608 hemD Listeria monocytogenes serotype 4b str. F2365 uroporphyrinogen-III synthase YP_014174.1 1571156 R 265669 CDS YP_014175.1 46907786 2798597 complement(1571875..1572804) 1 NC_002973.6 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 1572804 hemC 2798597 hemC Listeria monocytogenes serotype 4b str. F2365 porphobilinogen deaminase YP_014175.1 1571875 R 265669 CDS YP_014176.1 46907787 2798600 complement(1572808..1574115) 1 NC_002973.6 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 1574115 hemA 2798600 hemA Listeria monocytogenes serotype 4b str. F2365 glutamyl-tRNA reductase YP_014176.1 1572808 R 265669 CDS YP_014177.1 46907788 2798601 complement(1574243..1574827) 1 NC_002973.6 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 1574827 engB 2798601 engB Listeria monocytogenes serotype 4b str. F2365 ribosome biogenesis GTP-binding protein YsxC YP_014177.1 1574243 R 265669 CDS YP_014178.1 46907789 2798560 complement(1574935..1576857) 1 NC_002973.6 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 1576857 thrS 2798560 thrS Listeria monocytogenes serotype 4b str. F2365 threonyl-tRNA synthetase YP_014178.1 1574935 R 265669 CDS YP_014179.1 46907790 2798543 complement(1577046..1577150) 1 NC_002973.6 hypothetical protein 1577150 2798543 LMOf2365_1581 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014179.1 1577046 R 265669 CDS YP_014180.1 46907791 2798544 complement(1577207..1578130) 1 NC_002973.6 Primosomal protein that may act to load helicase DnaC during DNA replication; primosomal protein DnaI 1578130 dnaI 2798544 dnaI Listeria monocytogenes serotype 4b str. F2365 primosomal protein DnaI YP_014180.1 1577207 R 265669 CDS YP_014181.1 46907792 2798502 complement(1578140..1579501) 1 NC_002973.6 identified by similarity to SP:P07908; DNA replication protein DnaB 1579501 2798502 LMOf2365_1583 Listeria monocytogenes serotype 4b str. F2365 DNA replication protein DnaB YP_014181.1 1578140 R 265669 CDS YP_014182.1 46907793 2798504 complement(1579522..1579986) 1 NC_002973.6 identified by similarity to GP:16414084; match to protein family HMM PF03477; match to protein family HMM TIGR00244; NrdR family transcriptional regulator 1579986 nrdR 2798504 nrdR Listeria monocytogenes serotype 4b str. F2365 NrdR family transcriptional regulator YP_014182.1 1579522 R 265669 CDS YP_014183.1 46907794 2798494 complement(1580064..1580666) 1 NC_002973.6 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 1580666 coaE 2798494 coaE Listeria monocytogenes serotype 4b str. F2365 dephospho-CoA kinase YP_014183.1 1580064 R 265669 CDS YP_014184.1 46907795 2798484 complement(1580683..1581504) 1 NC_002973.6 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 1581504 mutM 2798484 mutM Listeria monocytogenes serotype 4b str. F2365 formamidopyrimidine-DNA glycosylase YP_014184.1 1580683 R 265669 CDS YP_014185.1 46907796 2798485 complement(1581528..1584155) 1 NC_002973.6 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 1584155 polA 2798485 polA Listeria monocytogenes serotype 4b str. F2365 DNA polymerase I YP_014185.1 1581528 R 265669 CDS YP_014186.1 46907797 2798476 complement(1584320..1585582) 1 NC_002973.6 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 1585582 icd 2798476 icd Listeria monocytogenes serotype 4b str. F2365 isocitrate dehydrogenase YP_014186.1 1584320 R 265669 CDS YP_014187.1 46907798 2798477 complement(1585602..1586723) 1 NC_002973.6 catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; citrate synthase 1586723 2798477 LMOf2365_1589 Listeria monocytogenes serotype 4b str. F2365 citrate synthase YP_014187.1 1585602 R 265669 CDS YP_014188.1 46907799 2798466 complement(1586760..1587221) 1 NC_002973.6 hypothetical protein 1587221 2798466 LMOf2365_1590 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014188.1 1586760 R 265669 CDS YP_014189.1 46907800 2798467 complement(1587378..1587755) 1 NC_002973.6 F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; FxsA protein 1587755 fxsA 2798467 fxsA Listeria monocytogenes serotype 4b str. F2365 FxsA protein YP_014189.1 1587378 R 265669 CDS YP_014190.1 46907801 2798449 complement(1587874..1589631) 1 NC_002973.6 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 1589631 pyk 2798449 pyk Listeria monocytogenes serotype 4b str. F2365 pyruvate kinase YP_014190.1 1587874 R 265669 CDS YP_014191.1 46907802 2798420 complement(1589914..1590873) 1 NC_002973.6 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 1590873 pfkA 2798420 pfkA Listeria monocytogenes serotype 4b str. F2365 6-phosphofructokinase YP_014191.1 1589914 R 265669 CDS YP_014192.1 46907803 2798421 complement(1591158..1592114) 1 NC_002973.6 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1592114 accA 2798421 accA Listeria monocytogenes serotype 4b str. F2365 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_014192.1 1591158 R 265669 CDS YP_014193.1 46907804 2798398 complement(1592104..1592988) 1 NC_002973.6 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 1592988 accD 2798398 accD Listeria monocytogenes serotype 4b str. F2365 acetyl-CoA carboxylase subunit beta YP_014193.1 1592104 R 265669 CDS YP_014194.1 46907805 2798399 complement(1593206..1596532) 1 NC_002973.6 identified by similarity to SP:O34623; match to protein family HMM PF01336; match to protein family HMM PF02231; match to protein family HMM PF02811; match to protein family HMM TIGR00594; match to protein family HMM TIGR01612; DNA polymerase III subunit alpha 1596532 dnaE 2798399 dnaE Listeria monocytogenes serotype 4b str. F2365 DNA polymerase III subunit alpha YP_014194.1 1593206 R 265669 CDS YP_014195.1 46907806 2798379 complement(1596654..1597589) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1599; match to protein family HMM PF01368; match to protein family HMM PF02272; DHH subfamily 1 protein 1597589 2798379 LMOf2365_1597 Listeria monocytogenes serotype 4b str. F2365 DHH subfamily 1 protein YP_014195.1 1596654 R 265669 CDS YP_014196.1 46907807 2798388 complement(1597610..1598923) 1 NC_002973.6 identified by match to protein family HMM PF00571; match to protein family HMM PF03061; hypothetical protein 1598923 2798388 LMOf2365_1598 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014196.1 1597610 R 265669 CDS YP_014197.1 46907808 2798372 complement(1598949..1599635) 1 NC_002973.6 catalyzes the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins; metal-dependent hydrolase 1599635 2798372 LMOf2365_1599 Listeria monocytogenes serotype 4b str. F2365 metal-dependent hydrolase YP_014197.1 1598949 R 265669 CDS YP_014198.1 46907809 2798340 1599800..1600897 1 NC_002973.6 identified by similarity to SP:P46545; match to protein family HMM PF00557; proline dipeptidase 1600897 pepQ 2798340 pepQ Listeria monocytogenes serotype 4b str. F2365 proline dipeptidase YP_014198.1 1599800 D 265669 CDS YP_014199.1 46907810 2798362 complement(1600940..1602052) 1 NC_002973.6 identified by match to protein family HMM PF01262; match to protein family HMM PF05222; match to protein family HMM TIGR00518; alanine dehydrogenase 1602052 ald 2798362 ald Listeria monocytogenes serotype 4b str. F2365 alanine dehydrogenase YP_014199.1 1600940 R 265669 CDS YP_014200.1 46907811 2798363 1602291..1602755 1 NC_002973.6 identified by match to protein family HMM PF00582; universal stress protein 1602755 2798363 LMOf2365_1602 Listeria monocytogenes serotype 4b str. F2365 universal stress protein YP_014200.1 1602291 D 265669 CDS YP_014201.1 46907812 2798269 complement(1602807..1604000) 1 NC_002973.6 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 1604000 ackA 2798269 ackA Listeria monocytogenes serotype 4b str. F2365 acetate kinase YP_014201.1 1602807 R 265669 CDS YP_014202.1 46907813 2798177 complement(1604024..1605022) 1 NC_002973.6 identified by similarity to SP:P22772; hypothetical protein 1605022 2798177 LMOf2365_1604 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014202.1 1604024 R 265669 CDS YP_014203.1 46907814 2798178 complement(1605213..1605710) 1 NC_002973.6 antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase 1605710 tpx 2798178 tpx Listeria monocytogenes serotype 4b str. F2365 thiol peroxidase YP_014203.1 1605213 R 265669 CDS YP_014204.1 46907815 2798166 complement(1605771..1606307) 1 NC_002973.6 identified by match to protein family HMM PF06271; hypothetical protein 1606307 2798166 LMOf2365_1606 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014204.1 1605771 R 265669 CDS YP_014205.1 46907816 2798187 complement(1606327..1607340) 1 NC_002973.6 identified by match to protein family HMM PF01343; match to protein family HMM TIGR00706; U7 family peptidase 1607340 2798187 LMOf2365_1607 Listeria monocytogenes serotype 4b str. F2365 U7 family peptidase YP_014205.1 1606327 R 265669 CDS YP_014206.1 46907817 2798168 1607519..1608322 1 NC_002973.6 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1608322 ppnK 2798168 ppnK Listeria monocytogenes serotype 4b str. F2365 inorganic polyphosphate/ATP-NAD kinase YP_014206.1 1607519 D 265669 CDS YP_014207.1 46907818 2797905 complement(1608354..1609304) 1 NC_002973.6 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 1609304 argF-2 2797905 argF-2 Listeria monocytogenes serotype 4b str. F2365 ornithine carbamoyltransferase YP_014207.1 1608354 R 265669 CDS YP_014208.1 46907819 2797889 complement(1609301..1610461) 1 NC_002973.6 identified by similarity to SP:P36839; match to protein family HMM PF00202; match to protein family HMM TIGR00707; acetylornithine aminotransferase 1610461 argD 2797889 argD Listeria monocytogenes serotype 4b str. F2365 acetylornithine aminotransferase YP_014208.1 1609301 R 265669 CDS YP_014209.1 46907820 2799015 complement(1610458..1611210) 1 NC_002973.6 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 1611210 argB 2799015 argB Listeria monocytogenes serotype 4b str. F2365 acetylglutamate kinase YP_014209.1 1610458 R 265669 CDS YP_014210.1 46907821 2799016 complement(1611223..1612419) 1 NC_002973.6 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 1612419 argJ 2799016 argJ Listeria monocytogenes serotype 4b str. F2365 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_014210.1 1611223 R 265669 CDS YP_014211.1 46907822 2797710 complement(1612435..1613466) 1 NC_002973.6 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 1613466 argC 2797710 argC Listeria monocytogenes serotype 4b str. F2365 N-acetyl-gamma-glutamyl-phosphate reductase YP_014211.1 1612435 R 265669 CDS YP_014212.1 46907823 2797711 complement(1613637..1614848) 1 NC_002973.6 Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 1614848 thiI 2797711 thiI Listeria monocytogenes serotype 4b str. F2365 thiamine biosynthesis protein ThiI YP_014212.1 1613637 R 265669 CDS YP_014213.1 46907824 2798787 complement(1614850..1615989) 1 NC_002973.6 identified by match to protein family HMM PF00266; class V aminotransferase 1615989 2798787 LMOf2365_1615 Listeria monocytogenes serotype 4b str. F2365 class V aminotransferase YP_014213.1 1614850 R 265669 CDS YP_014214.1 46907825 2798773 complement(1616117..1617832) 1 NC_002973.6 acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation; septation ring formation regulator EzrA 1617832 ezrA 2798773 ezrA Listeria monocytogenes serotype 4b str. F2365 septation ring formation regulator EzrA YP_014214.1 1616117 R 265669 CDS YP_014215.1 46907826 2798783 1618125..1618613 1 NC_002973.6 GAF domain-containing protein 1618613 2798783 LMOf2365_1617 Listeria monocytogenes serotype 4b str. F2365 GAF domain-containing protein YP_014215.1 1618125 D 265669 CDS YP_014216.1 46907827 2797636 1618825..1619427 1 NC_002973.6 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1619427 rpsD 2797636 rpsD Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S4 YP_014216.1 1618825 D 265669 CDS YP_014217.1 46907828 2797833 complement(1619527..1620786) 1 NC_002973.6 identified by match to protein family HMM PF00579; match to protein family HMM PF01479; match to protein family HMM TIGR00234; tyrosyl-tRNA synthetase 1620786 tyrS 2797833 tyrS Listeria monocytogenes serotype 4b str. F2365 tyrosyl-tRNA synthetase YP_014217.1 1619527 R 265669 CDS YP_014218.1 46907829 2797641 complement(1621108..1622115) 1 NC_002973.6 identified by similarity to SP:P25144; match to protein family HMM PF00356; match to protein family HMM PF00532; match to protein family HMM TIGR01481; catabolite control protein A 1622115 ccpA 2797641 ccpA Listeria monocytogenes serotype 4b str. F2365 catabolite control protein A YP_014218.1 1621108 R 265669 CDS YP_014219.1 46907830 2797665 complement(1622350..1623435) 1 NC_002973.6 catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase 1623435 2797665 LMOf2365_1621 Listeria monocytogenes serotype 4b str. F2365 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase YP_014219.1 1622350 R 265669 CDS YP_014220.1 46907831 2797684 complement(1623655..1624179) 1 NC_002973.6 identified by similarity to SP:P40780; hypothetical protein 1624179 2797684 LMOf2365_1622 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014220.1 1623655 R 265669 CDS YP_014221.1 46907832 2797849 complement(1624201..1624656) 1 NC_002973.6 identified by match to protein family HMM PF06103; hypothetical protein 1624656 2797849 LMOf2365_1623 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014221.1 1624201 R 265669 CDS YP_014222.1 46907833 2797712 1624912..1626024 1 NC_002973.6 aminopeptidase 1626024 2797712 LMOf2365_1624 Listeria monocytogenes serotype 4b str. F2365 aminopeptidase YP_014222.1 1624912 D 265669 CDS YP_014223.1 46907834 2799476 complement(1626065..1626610) 1 NC_002973.6 identified by similarity to GP:5457310; match to protein family HMM PF00578; peroxiredoxin 1626610 2799476 LMOf2365_1625 Listeria monocytogenes serotype 4b str. F2365 peroxiredoxin YP_014223.1 1626065 R 265669 CDS YP_014224.1 46907835 2799505 1626643..1626762 1 NC_002973.6 hypothetical protein 1626762 2799505 LMOf2365_1626 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014224.1 1626643 D 265669 CDS YP_014225.1 46907836 2797686 complement(1626755..1628098) 1 NC_002973.6 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 1628098 murC 2797686 murC Listeria monocytogenes serotype 4b str. F2365 UDP-N-acetylmuramate--L-alanine ligase YP_014225.1 1626755 R 265669 CDS YP_014226.1 46907837 2797824 complement(1628393..1630744) 1 NC_002973.6 identified by similarity to OMNI:NTL01SA1619; match to protein family HMM PF01580; FtsK/SpoIIIE family protein 1630744 2797824 LMOf2365_1628 Listeria monocytogenes serotype 4b str. F2365 FtsK/SpoIIIE family protein YP_014226.1 1628393 R 265669 CDS YP_014227.1 46907838 2797825 complement(1631054..1631671) 1 NC_002973.6 identified by match to protein family HMM PF01588; tRNA-binding domain-containing protein 1631671 2797825 LMOf2365_1629 Listeria monocytogenes serotype 4b str. F2365 tRNA-binding domain-containing protein YP_014227.1 1631054 R 265669 CDS YP_014228.1 46907839 2797820 complement(1631677..1632477) 1 NC_002973.6 hypothetical protein 1632477 2797820 LMOf2365_1630 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014228.1 1631677 R 265669 CDS YP_014229.1 46907840 2797803 complement(1632512..1632823) 1 NC_002973.6 identified by match to protein family HMM PF00085; thioredoxin family protein 1632823 2797803 LMOf2365_1631 Listeria monocytogenes serotype 4b str. F2365 thioredoxin family protein YP_014229.1 1632512 R 265669 CDS YP_014230.1 46907841 2797810 complement(1632938..1633156) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1640; hypothetical protein 1633156 2797810 LMOf2365_1632 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014230.1 1632938 R 265669 CDS YP_014231.1 46907842 2797779 complement(1633149..1634222) 1 NC_002973.6 identified by similarity to SP:Q48677; match to protein family HMM PF05343; glutamyl-aminopeptidase 1634222 2797779 LMOf2365_1633 Listeria monocytogenes serotype 4b str. F2365 glutamyl-aminopeptidase YP_014231.1 1633149 R 265669 CDS YP_014232.1 46907843 2797776 1634420..1634731 1 NC_002973.6 identified by similarity to OMNI:EF3039; hypothetical protein 1634731 2797776 LMOf2365_1634 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014232.1 1634420 D 265669 CDS YP_014233.1 46907844 2797760 complement(1634768..1635040) 1 NC_002973.6 identified by similarity to SP:P76424; hypothetical protein 1635040 2797760 LMOf2365_1635 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014233.1 1634768 R 265669 CDS YP_014234.1 46907845 2797744 complement(1635150..1636001) 1 NC_002973.6 identified by match to protein family HMM PF00753; metallo-beta-lactamase 1636001 2797744 LMOf2365_1636 Listeria monocytogenes serotype 4b str. F2365 metallo-beta-lactamase YP_014234.1 1635150 R 265669 CDS YP_014235.1 46907846 2797720 complement(1636062..1636706) 1 NC_002973.6 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 1636706 trmB 2797720 trmB Listeria monocytogenes serotype 4b str. F2365 tRNA (guanine-N(7)-)-methyltransferase YP_014235.1 1636062 R 265669 CDS YP_014236.1 46907847 2797842 complement(1636713..1637495) 1 NC_002973.6 identified by match to protein family HMM PF01636; phosphotransferase enzyme family protein 1637495 2797842 LMOf2365_1638 Listeria monocytogenes serotype 4b str. F2365 phosphotransferase enzyme family protein YP_014236.1 1636713 R 265669 CDS YP_014237.1 46907848 2797940 complement(1639172..1639612) 1 NC_002973.6 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1639612 2797940 LMOf2365_1640 Listeria monocytogenes serotype 4b str. F2365 MarR family transcriptional regulator YP_014237.1 1639172 R 265669 CDS YP_014238.1 46907849 2797478 complement(1639834..1640703) 1 NC_002973.6 identified by match to protein family HMM PF01063; match to protein family HMM TIGR01121; D-amino acid aminotransferase 1640703 dat 2797478 dat Listeria monocytogenes serotype 4b str. F2365 D-amino acid aminotransferase YP_014238.1 1639834 R 265669 CDS YP_014239.1 46907850 2797479 complement(1640816..1642228) 1 NC_002973.6 divalent metal ion-dependent extracellular dipeptidase; able to hydrolyze a broad range of dipeptides but no tri-, tetra-, or larger oligopeptides; differences in the amino acid specificity of the cleavage site varies between species; similar to succinyl-diaminopimelate desuccinylases; dipeptidase PepV 1642228 2797479 LMOf2365_1642 Listeria monocytogenes serotype 4b str. F2365 dipeptidase PepV YP_014239.1 1640816 R 265669 CDS YP_014240.1 46907851 2799494 complement(1642303..1642716) 1 NC_002973.6 identified by match to protein family HMM PF00293; MutT/nudix family protein 1642716 2799494 LMOf2365_1643 Listeria monocytogenes serotype 4b str. F2365 MutT/nudix family protein YP_014240.1 1642303 R 265669 CDS YP_014241.1 46907852 2799495 1642821..1643651 1 NC_002973.6 identified by similarity to GP:16414150; match to protein family HMM PF01256; match to protein family HMM TIGR00196; hypothetical protein 1643651 2799495 LMOf2365_1644 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014241.1 1642821 D 265669 CDS YP_014242.1 46907853 2797202 complement(1643689..1644342) 1 NC_002973.6 identified by match to protein family HMM PF01569; PAP2 family protein 1644342 2797202 LMOf2365_1645 Listeria monocytogenes serotype 4b str. F2365 PAP2 family protein YP_014242.1 1643689 R 265669 CDS YP_014243.1 46907854 2798432 complement(1644352..1645965) 1 NC_002973.6 identified by match to protein family HMM PF01943; polysaccharide biosynthesis family protein 1645965 2798432 LMOf2365_1646 Listeria monocytogenes serotype 4b str. F2365 polysaccharide biosynthesis family protein YP_014243.1 1644352 R 265669 CDS YP_014244.1 46907855 2798427 complement(1646076..1647689) 1 NC_002973.6 identified by match to protein family HMM PF01943; polysaccharide biosynthesis family protein 1647689 2798427 LMOf2365_1647 Listeria monocytogenes serotype 4b str. F2365 polysaccharide biosynthesis family protein YP_014244.1 1646076 R 265669 CDS YP_014245.1 46907856 2798440 complement(1647774..1648211) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1656; hypothetical protein 1648211 2798440 LMOf2365_1648 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014245.1 1647774 R 265669 CDS YP_014246.1 46907857 2797595 complement(1648282..1649055) 1 NC_002973.6 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1649055 trpA 2797595 trpA Listeria monocytogenes serotype 4b str. F2365 tryptophan synthase subunit alpha YP_014246.1 1648282 R 265669 CDS YP_014247.1 46907858 2798392 complement(1649048..1650250) 1 NC_002973.6 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1650250 trpB 2798392 trpB Listeria monocytogenes serotype 4b str. F2365 tryptophan synthase subunit beta YP_014247.1 1649048 R 265669 CDS YP_014248.1 46907859 2798393 complement(1650253..1650861) 1 NC_002973.6 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 1650861 trpF 2798393 trpF Listeria monocytogenes serotype 4b str. F2365 N-(5'-phosphoribosyl)anthranilate isomerase YP_014248.1 1650253 R 265669 CDS YP_014249.1 46907860 2798367 complement(1650858..1651616) 1 NC_002973.6 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; Indole-3-glycerol phosphate synthase 1651616 trpC 2798367 trpC Listeria monocytogenes serotype 4b str. F2365 Indole-3-glycerol phosphate synthase YP_014249.1 1650858 R 265669 CDS YP_014250.1 46907861 2798368 complement(1651613..1652632) 1 NC_002973.6 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 1652632 trpD 2798368 trpD Listeria monocytogenes serotype 4b str. F2365 anthranilate phosphoribosyltransferase YP_014250.1 1651613 R 265669 CDS YP_014251.1 46907862 2797623 complement(1652604..1653209) 1 NC_002973.6 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 1653209 trpG 2797623 trpG Listeria monocytogenes serotype 4b str. F2365 anthranilate synthase component II YP_014251.1 1652604 R 265669 CDS YP_014252.1 46907863 2797624 complement(1653206..1654579) 1 NC_002973.6 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 1654579 trpE 2797624 trpE Listeria monocytogenes serotype 4b str. F2365 anthranilate synthase component I YP_014252.1 1653206 R 265669 CDS YP_014253.1 46907864 2798720 1655655..1658255 1 NC_002973.6 identified by match to protein family HMM PF00171; match to protein family HMM PF00465; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 1658255 adhE 2798720 adhE Listeria monocytogenes serotype 4b str. F2365 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_014253.1 1655655 D 265669 CDS YP_014254.1 46907865 2798681 1658378..1658806 1 NC_002973.6 hypothetical protein 1658806 2798681 LMOf2365_1657 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014254.1 1658378 D 265669 CDS YP_014255.1 46907866 2797593 1658890..1659810 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1659810 2797593 LMOf2365_1658 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_014255.1 1658890 D 265669 CDS YP_014256.1 46907867 2798702 1659807..1660874 1 NC_002973.6 ABC transporter permease 1660874 2798702 LMOf2365_1659 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_014256.1 1659807 D 265669 CDS YP_014257.1 46907868 2798742 complement(1660911..1661885) 1 NC_002973.6 identified by match to protein family HMM PF02016; hypothetical protein 1661885 2798742 LMOf2365_1660 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014257.1 1660911 R 265669 CDS YP_014258.1 46907869 2797574 complement(1661882..1662463) 1 NC_002973.6 identified by similarity to SP:P05100; match to protein family HMM PF03352; DNA-3-methyladenine glycosylase I 1662463 tag 2797574 tag Listeria monocytogenes serotype 4b str. F2365 DNA-3-methyladenine glycosylase I YP_014258.1 1661882 R 265669 CDS YP_014259.1 46907870 2798665 complement(1662809..1665511) 1 NC_002973.6 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1665511 acnA 2798665 acnA Listeria monocytogenes serotype 4b str. F2365 aconitate hydratase YP_014259.1 1662809 R 265669 CDS YP_014260.1 46907871 2798642 complement(1665666..1666469) 1 NC_002973.6 identified by match to protein family HMM PF01740; STAS domain-containing protein 1666469 2798642 LMOf2365_1663 Listeria monocytogenes serotype 4b str. F2365 STAS domain-containing protein YP_014260.1 1665666 R 265669 CDS YP_014261.1 46907872 2798604 complement(1666493..1666915) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1673; hypothetical protein 1666915 2798604 LMOf2365_1664 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014261.1 1666493 R 265669 CDS YP_014262.1 46907873 2798638 complement(1666915..1670133) 1 NC_002973.6 identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04434; match to protein family HMM TIGR01612; SNF2 family helicase 1670133 2798638 LMOf2365_1665 Listeria monocytogenes serotype 4b str. F2365 SNF2 family helicase YP_014262.1 1666915 R 265669 CDS YP_014263.1 46907874 2798589 complement(1670217..1673288) 1 NC_002973.6 identified by match to protein family HMM TIGR01612; SbcC family exonuclease 1673288 2798589 LMOf2365_1666 Listeria monocytogenes serotype 4b str. F2365 SbcC family exonuclease YP_014263.1 1670217 R 265669 CDS YP_014264.1 46907875 2798624 complement(1673285..1674409) 1 NC_002973.6 identified by similarity to SP:P23479; match to protein family HMM PF00149; match to protein family HMM TIGR00619; exonuclease SbcD 1674409 2798624 LMOf2365_1667 Listeria monocytogenes serotype 4b str. F2365 exonuclease SbcD YP_014264.1 1673285 R 265669 CDS YP_014265.1 46907876 2797564 1674525..1675133 1 NC_002973.6 identified by match to protein family HMM PF01553; match to protein family HMM TIGR00530; 1-acyl-sn-glycerol-3-phosphate acyltransferase 1675133 2797564 LMOf2365_1668 Listeria monocytogenes serotype 4b str. F2365 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_014265.1 1674525 D 265669 CDS YP_014266.1 46907877 2798567 complement(1675175..1675690) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1678; hypothetical protein 1675690 2798567 LMOf2365_1669 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014266.1 1675175 R 265669 CDS YP_014267.1 46907878 2797716 complement(1675864..1676352) 1 NC_002973.6 identified by similarity to OMNI:SA1380; hypothetical protein 1676352 2797716 LMOf2365_1670 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014267.1 1675864 R 265669 CDS YP_014268.1 46907879 2797403 complement(1676433..1678238) 1 NC_002973.6 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 1678238 2797403 LMOf2365_1671 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein/permease YP_014268.1 1676433 R 265669 CDS YP_014269.1 46907880 2798753 complement(1678222..1679991) 1 NC_002973.6 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 1679991 2798753 LMOf2365_1672 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein/permease YP_014269.1 1678222 R 265669 CDS YP_014270.1 46907881 2798580 complement(1680395..1681000) 1 NC_002973.6 hypothetical protein 1681000 2798580 LMOf2365_1673 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014270.1 1680395 R 265669 CDS YP_014271.1 46907882 2797873 complement(1681031..1681525) 1 NC_002973.6 hypothetical protein 1681525 2797873 LMOf2365_1674 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014271.1 1681031 R 265669 CDS YP_014272.1 46907883 2798612 complement(1682007..1682114) 1 NC_002973.6 hypothetical protein 1682114 2798612 LMOf2365_1675 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014272.1 1682007 R 265669 CDS YP_014273.1 46907884 2798539 complement(1682319..1682882) 1 NC_002973.6 identified by match to protein family HMM PF04892; hypothetical protein 1682882 2798539 LMOf2365_1676 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014273.1 1682319 R 265669 CDS YP_014274.1 46907885 2797865 complement(1682900..1683331) 1 NC_002973.6 hypothetical protein 1683331 2797865 LMOf2365_1677 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014274.1 1682900 R 265669 CDS YP_014275.1 46907886 2798556 complement(1683890..1684774) 1 NC_002973.6 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1684774 tsf 2798556 tsf Listeria monocytogenes serotype 4b str. F2365 elongation factor Ts YP_014275.1 1683890 R 265669 CDS YP_014276.1 46907887 2797860 complement(1684854..1685603) 1 NC_002973.6 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1685603 rpsB 2797860 rpsB Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S2 YP_014276.1 1684854 R 265669 CDS YP_014277.1 46907888 2798553 complement(1686342..1687790) 1 NC_002973.6 identified by similarity to SP:P27219; match to protein family HMM PF00367; match to protein family HMM PF02378; PTS system sucrose-specific transporter subunit IIBC 1687790 2798553 LMOf2365_1681 Listeria monocytogenes serotype 4b str. F2365 PTS system sucrose-specific transporter subunit IIBC YP_014277.1 1686342 R 265669 CDS YP_014278.1 46907889 2798511 complement(1687803..1688693) 1 NC_002973.6 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 1688693 murQ 2798511 murQ Listeria monocytogenes serotype 4b str. F2365 N-acetylmuramic acid 6-phosphate etherase YP_014278.1 1687803 R 265669 CDS YP_014279.1 46907890 2798512 complement(1688834..1689685) 1 NC_002973.6 identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family phosphosugar-binding transcriptional regulator 1689685 2798512 LMOf2365_1683 Listeria monocytogenes serotype 4b str. F2365 RpiR family phosphosugar-binding transcriptional regulator YP_014279.1 1688834 R 265669 CDS YP_014280.1 46907891 2798737 complement(1689773..1692184) 1 NC_002973.6 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 1692184 leuS 2798737 leuS Listeria monocytogenes serotype 4b str. F2365 leucyl-tRNA synthetase YP_014280.1 1689773 R 265669 CDS YP_014281.1 46907892 2798535 1692588..1693553 1 NC_002973.6 identified by similarity to GP:16414257; match to protein family HMM PF04055; match to protein family HMM TIGR01212; hypothetical protein 1693553 2798535 LMOf2365_1685 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014281.1 1692588 D 265669 CDS YP_014282.1 46907893 2797878 1693550..1694128 1 NC_002973.6 identified by similarity to OMNI:NTL01BH3288; hypothetical protein 1694128 2797878 LMOf2365_1686 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014282.1 1693550 D 265669 CDS YP_014283.1 46907894 2798460 complement(1694150..1696015) 1 NC_002973.6 identified by similarity to SP:P54420; match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536; asparagine synthase 1696015 asnB 2798460 asnB Listeria monocytogenes serotype 4b str. F2365 asparagine synthase YP_014283.1 1694150 R 265669 CDS YP_014284.1 46907895 2798516 complement(1696152..1697351) 1 NC_002973.6 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 1697351 metK 2798516 metK Listeria monocytogenes serotype 4b str. F2365 S-adenosylmethionine synthetase YP_014284.1 1696152 R 265669 CDS YP_014285.1 46907896 2798517 1697773..1698075 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1763; hypothetical protein 1698075 2798517 LMOf2365_1689 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014285.1 1697773 D 265669 CDS YP_014286.1 46907897 2798711 complement(1698108..1703246) 1 NC_002973.6 identified by match to protein family HMM PF02494; match to protein family HMM TIGR01612; hypothetical protein 1703246 2798711 LMOf2365_1690 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014286.1 1698108 R 265669 CDS YP_014287.1 46907898 2798473 complement(1703341..1704252) 1 NC_002973.6 identified by match to protein family HMM PF00056; match to protein family HMM PF02866; match to protein family HMM TIGR01771; lactate/malate dehydrogenase 1704252 2798473 LMOf2365_1691 Listeria monocytogenes serotype 4b str. F2365 lactate/malate dehydrogenase YP_014287.1 1703341 R 265669 CDS YP_014288.1 46907899 2797881 complement(1704269..1704511) 1 NC_002973.6 identified by similarity to SP:O34365; hypothetical protein 1704511 2797881 LMOf2365_1692 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014288.1 1704269 R 265669 CDS YP_014289.1 46907900 2797828 complement(1704562..1705035) 1 NC_002973.6 identified by match to protein family HMM PF00293; MutT/nudix family protein 1705035 2797828 LMOf2365_1693 Listeria monocytogenes serotype 4b str. F2365 MutT/nudix family protein YP_014289.1 1704562 R 265669 CDS YP_014290.1 46907901 2798765 1705109..1705375 1 NC_002973.6 identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein 1705375 2798765 LMOf2365_1694 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014290.1 1705109 D 265669 CDS YP_014291.1 46907902 2797671 1705516..1706478 1 NC_002973.6 identified by similarity to GP:4249623; match to protein family HMM PF01297; laminin-binding surface protein 1706478 2797671 LMOf2365_1695 Listeria monocytogenes serotype 4b str. F2365 laminin-binding surface protein YP_014291.1 1705516 D 265669 CDS YP_014292.1 46907903 2798871 complement(1706496..1707899) 1 NC_002973.6 converts O-succinylbenzoate to O-succinylbenzoyl-CoA; O-succinylbenzoic acid--CoA ligase 1707899 menE 2798871 menE Listeria monocytogenes serotype 4b str. F2365 O-succinylbenzoic acid--CoA ligase YP_014292.1 1706496 R 265669 CDS YP_014293.1 46907904 2799385 complement(1707921..1708739) 1 NC_002973.6 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 1708739 menB 2799385 menB Listeria monocytogenes serotype 4b str. F2365 naphthoate synthase YP_014293.1 1707921 R 265669 CDS YP_014294.1 46907905 2799386 complement(1708736..1709563) 1 NC_002973.6 identified by similarity to OMNI:EF0449; match to protein family HMM PF00561; alpha/beta fold family hydrolase 1709563 2799386 LMOf2365_1698 Listeria monocytogenes serotype 4b str. F2365 alpha/beta fold family hydrolase YP_014294.1 1708736 R 265669 CDS YP_014295.1 46907906 2799421 complement(1709565..1711307) 1 NC_002973.6 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 1711307 menD 2799421 menD Listeria monocytogenes serotype 4b str. F2365 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase YP_014295.1 1709565 R 265669 CDS YP_014296.1 46907907 2798250 complement(1711304..1712692) 1 NC_002973.6 synthesizes isochorismate acid from chorismate; menaquinone-specific isochorismate synthase 1712692 2798250 LMOf2365_1700 Listeria monocytogenes serotype 4b str. F2365 menaquinone-specific isochorismate synthase YP_014296.1 1711304 R 265669 CDS YP_014297.1 46907908 2798251 1712867..1713805 1 NC_002973.6 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1713805 2798251 LMOf2365_1701 Listeria monocytogenes serotype 4b str. F2365 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_014297.1 1712867 D 265669 CDS YP_014298.1 46907909 2797412 complement(1713839..1715692) 1 NC_002973.6 catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine; expressed in B. subtilis under methionine starvation conditions; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase 1715692 2797412 LMOf2365_1702 Listeria monocytogenes serotype 4b str. F2365 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase YP_014298.1 1713839 R 265669 CDS YP_014299.1 46907910 2798926 complement(1715689..1716861) 1 NC_002973.6 catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 1716861 2798926 LMOf2365_1703 Listeria monocytogenes serotype 4b str. F2365 cystathionine beta-lyase YP_014299.1 1715689 R 265669 CDS YP_014300.1 46907911 2798916 complement(1716854..1717978) 1 NC_002973.6 identified by similarity to SP:Q9RAS9; match to protein family HMM PF01053; cystathionine beta/gamma-lyase 1717978 2798916 LMOf2365_1704 Listeria monocytogenes serotype 4b str. F2365 cystathionine beta/gamma-lyase YP_014300.1 1716854 R 265669 CDS YP_014301.1 46907912 2798893 complement(1718000..1720297) 1 NC_002973.6 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 1720297 metE 2798893 metE Listeria monocytogenes serotype 4b str. F2365 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_014301.1 1718000 R 265669 CDS YP_014302.1 46907913 2798887 complement(1720587..1721762) 1 NC_002973.6 identified by match to protein family HMM PF00083; major facilitator family transporter 1721762 2798887 LMOf2365_1706 Listeria monocytogenes serotype 4b str. F2365 major facilitator family transporter YP_014302.1 1720587 R 265669 CDS YP_014303.1 46907914 2799715 complement(1729190..1729636) 1 NC_002973.6 identified by similarity to SP:P71086; match to protein family HMM PF01475; peroxide operon transcriptional regulator 1729636 2799715 LMOf2365_1707 Listeria monocytogenes serotype 4b str. F2365 peroxide operon transcriptional regulator YP_014303.1 1729190 R 265669 CDS YP_014304.1 46907915 2799720 complement(1729719..1730660) 1 NC_002973.6 identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-isomer specific 2-hydroxyacid dehydrogenase 1730660 2799720 LMOf2365_1708 Listeria monocytogenes serotype 4b str. F2365 D-isomer specific 2-hydroxyacid dehydrogenase YP_014304.1 1729719 R 265669 CDS YP_014305.1 46907916 2799725 1730805..1732103 1 NC_002973.6 converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate; glutamate-1-semialdehyde aminotransferase 1732103 gsaB 2799725 gsaB Listeria monocytogenes serotype 4b str. F2365 glutamate-1-semialdehyde aminotransferase YP_014305.1 1730805 D 265669 CDS YP_014306.1 46907917 2799727 1732209..1733297 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1783; match to protein family HMM PF06081; hypothetical protein 1733297 2799727 LMOf2365_1710 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014306.1 1732209 D 265669 CDS YP_014307.1 46907918 2797957 complement(1733339..1733866) 1 NC_002973.6 identified by similarity to OMNI:SA1925; match to protein family HMM PF04167; hypothetical protein 1733866 2797957 LMOf2365_1711 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014307.1 1733339 R 265669 CDS YP_014308.1 46907919 2797852 complement(1734021..1734767) 1 NC_002973.6 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 1734767 2797852 LMOf2365_1712 Listeria monocytogenes serotype 4b str. F2365 enoyl-ACP reductase YP_014308.1 1734021 R 265669 CDS YP_014309.1 46907920 2799771 complement(1734771..1735859) 1 NC_002973.6 identified by similarity to SP:Q05869; match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01084; A/G-specific adenine glycosylase 1735859 mutY 2799771 mutY Listeria monocytogenes serotype 4b str. F2365 A/G-specific adenine glycosylase YP_014309.1 1734771 R 265669 CDS YP_014310.1 46907921 2799830 1736068..1737048 1 NC_002973.6 identified by similarity to OMNI:SA1927; hypothetical protein 1737048 2799830 LMOf2365_1714 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014310.1 1736068 D 265669 CDS YP_014311.1 46907922 2799819 complement(1737077..1737547) 1 NC_002973.6 identified by match to protein family HMM PF00692; dUTPase 1737547 2799819 LMOf2365_1715 Listeria monocytogenes serotype 4b str. F2365 dUTPase YP_014311.1 1737077 R 265669 CDS YP_014312.1 46907923 2798904 complement(1737550..1737783) 1 NC_002973.6 identified by similarity to GP:16414303; hypothetical protein 1737783 2798904 LMOf2365_1716 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014312.1 1737550 R 265669 CDS YP_014313.1 46907924 2798988 complement(1737785..1738594) 1 NC_002973.6 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 1738594 recX 2798988 recX Listeria monocytogenes serotype 4b str. F2365 recombination regulator RecX YP_014313.1 1737785 R 265669 CDS YP_014314.1 46907925 2798080 1738683..1739594 1 NC_002973.6 identified by similarity to GP:15980756; match to protein family HMM TIGR01777; hypothetical protein 1739594 2798080 LMOf2365_1718 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014314.1 1738683 D 265669 CDS YP_014315.1 46907926 2799620 complement(1739615..1742212) 1 NC_002973.6 identified by match to protein family HMM PF04329; match to protein family HMM PF04330; match to protein family HMM PF04331; hypothetical protein 1742212 2799620 LMOf2365_1719 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014315.1 1739615 R 265669 CDS YP_014316.1 46907927 2798946 complement(1742239..1742913) 1 NC_002973.6 identified by match to protein family HMM PF04892; hypothetical protein 1742913 2798946 LMOf2365_1720 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014316.1 1742239 R 265669 CDS YP_014317.1 46907928 2797405 1743121..1744086 1 NC_002973.6 identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 1744086 2797405 LMOf2365_1721 Listeria monocytogenes serotype 4b str. F2365 cation efflux family protein YP_014317.1 1743121 D 265669 CDS YP_014318.1 46907929 2799430 complement(1744131..1744673) 1 NC_002973.6 acetyltransferase 1744673 2799430 LMOf2365_1722 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_014318.1 1744131 R 265669 CDS YP_014319.1 46907930 2799453 1744863..1745765 1 NC_002973.6 identified by match to protein family HMM PF00015; match to protein family HMM PF00785; match to protein family HMM TIGR00229; methyl-accepting chemotaxis protein 1745765 2799453 LMOf2365_1723 Listeria monocytogenes serotype 4b str. F2365 methyl-accepting chemotaxis protein YP_014319.1 1744863 D 265669 CDS YP_014320.1 46907931 2798087 1745793..1745999 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1797; hypothetical protein 1745999 2798087 LMOf2365_1724 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014320.1 1745793 D 265669 CDS YP_014321.1 46907932 2797264 complement(1746039..1746392) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1798; hypothetical protein 1746392 2797264 LMOf2365_1725 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014321.1 1746039 R 265669 CDS YP_014322.1 46907933 2799760 complement(1746421..1746822) 1 NC_002973.6 identified by match to protein family HMM PF00903; glyoxalase 1746822 2799760 LMOf2365_1726 Listeria monocytogenes serotype 4b str. F2365 glyoxalase YP_014322.1 1746421 R 265669 CDS YP_014323.1 46907934 2799761 complement(1746837..1748216) 1 NC_002973.6 identified by match to protein family HMM PF01938; match to protein family HMM PF05958; match to protein family HMM TIGR00479; RNA methyltransferase 1748216 2799761 LMOf2365_1727 Listeria monocytogenes serotype 4b str. F2365 RNA methyltransferase YP_014323.1 1746837 R 265669 CDS YP_014324.1 46907935 2797954 complement(1748281..1748661) 1 NC_002973.6 identified by similarity to GP:15978279; match to protein family HMM PF02566; hypothetical protein 1748661 2797954 LMOf2365_1728 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014324.1 1748281 R 265669 CDS YP_014325.1 46907936 2799599 1748768..1749412 1 NC_002973.6 identified by match to protein family HMM PF01712; deoxynucleoside kinase 1749412 2799599 LMOf2365_1729 Listeria monocytogenes serotype 4b str. F2365 deoxynucleoside kinase YP_014325.1 1748768 D 265669 CDS YP_014326.1 46907937 2797562 complement(1749442..1750311) 1 NC_002973.6 identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; ribonuclease BN 1750311 2797562 LMOf2365_1730 Listeria monocytogenes serotype 4b str. F2365 ribonuclease BN YP_014326.1 1749442 R 265669 CDS YP_014327.1 46907938 2799633 1750401..1750622 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1807; hypothetical protein 1750622 2799633 LMOf2365_1731 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014327.1 1750401 D 265669 CDS YP_014328.1 46907939 2797583 complement(1750642..1751436) 1 NC_002973.6 identified by similarity to SP:P30180; match to protein family HMM PF02522; aminoglycoside N3-acetyltransferase 1751436 2797583 LMOf2365_1732 Listeria monocytogenes serotype 4b str. F2365 aminoglycoside N3-acetyltransferase YP_014328.1 1750642 R 265669 CDS YP_014329.1 46907940 2797598 complement(1751574..1752332) 1 NC_002973.6 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 1752332 map 2797598 map Listeria monocytogenes serotype 4b str. F2365 methionine aminopeptidase YP_014329.1 1751574 R 265669 CDS YP_014330.1 46907941 2797266 1752520..1752966 1 NC_002973.6 identified by match to protein family HMM PF00258; match to protein family HMM TIGR01753; flavodoxin 1752966 2797266 LMOf2365_1734 Listeria monocytogenes serotype 4b str. F2365 flavodoxin YP_014330.1 1752520 D 265669 CDS YP_014331.1 46907942 2797267 1753104..1754336 1 NC_002973.6 identified by similarity to SP:P39762; match to protein family HMM PF02073; aminopeptidase 1754336 2797267 LMOf2365_1735 Listeria monocytogenes serotype 4b str. F2365 aminopeptidase YP_014331.1 1753104 D 265669 CDS YP_014332.1 46907943 2797063 1754440..1755699 1 NC_002973.6 identified by match to protein family HMM PF00083; major facilitator family transporter 1755699 2797063 LMOf2365_1736 Listeria monocytogenes serotype 4b str. F2365 major facilitator family transporter YP_014332.1 1754440 D 265669 CDS YP_014333.1 46907944 2797047 1755674..1755832 1 NC_002973.6 hypothetical protein 1755832 2797047 LMOf2365_1737 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014333.1 1755674 D 265669 CDS YP_014334.1 46907945 2797429 1755917..1756909 1 NC_002973.6 identified by similarity to SP:P39763; match to protein family HMM TIGR00904; rod shape-determining protein MreB 1756909 2797429 LMOf2365_1738 Listeria monocytogenes serotype 4b str. F2365 rod shape-determining protein MreB YP_014334.1 1755917 D 265669 CDS YP_014335.1 46907946 2797941 complement(1757183..1757755) 1 NC_002973.6 identified by similarity to GP:10172921; hypothetical protein 1757755 2797941 LMOf2365_1739 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014335.1 1757183 R 265669 CDS YP_014336.1 46907947 2797960 complement(1757846..1758511) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1814; hypothetical protein 1758511 2797960 LMOf2365_1740 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014336.1 1757846 R 265669 CDS YP_014337.1 46907948 2797821 1758699..1759283 1 NC_002973.6 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1759283 2797821 LMOf2365_1741 Listeria monocytogenes serotype 4b str. F2365 TetR family transcriptional regulator YP_014337.1 1758699 D 265669 CDS YP_014338.1 46907949 2798117 complement(1759375..1760463) 1 NC_002973.6 identified by similarity to OMNI:NTL01LL0179; match to protein family HMM PF05913; hypothetical protein 1760463 2798117 LMOf2365_1742 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014338.1 1759375 R 265669 CDS YP_014339.1 46907950 2798209 complement(1760485..1760787) 1 NC_002973.6 identified by similarity to SP:P46319; match to protein family HMM PF02255; PTS system beta-glucoside-specific transporter subunit IIA 1760787 2798209 LMOf2365_1743 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIA YP_014339.1 1760485 R 265669 CDS YP_014340.1 46907951 2798220 complement(1760857..1761165) 1 NC_002973.6 identified by similarity to SP:P46318; match to protein family HMM PF02302; PTS system beta-glucoside-specific transporter subunit IIB 1761165 2798220 LMOf2365_1744 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIB YP_014340.1 1760857 R 265669 CDS YP_014341.1 46907952 2799880 complement(1764136..1765464) 1 NC_002973.6 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; helicase domain-containing protein 1765464 2799880 LMOf2365_1746 Listeria monocytogenes serotype 4b str. F2365 helicase domain-containing protein YP_014341.1 1764136 R 265669 CDS YP_014342.1 46907953 2799027 complement(1765507..1766280) 1 NC_002973.6 hypothetical protein 1766280 2799027 LMOf2365_1747 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014342.1 1765507 R 265669 CDS YP_014343.1 46907954 2799070 complement(1766273..1766953) 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1766953 2799070 LMOf2365_1748 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_014343.1 1766273 R 265669 CDS YP_014344.1 46907955 2799247 complement(1766946..1767314) 1 NC_002973.6 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 1767314 2799247 LMOf2365_1749 Listeria monocytogenes serotype 4b str. F2365 GntR family transcriptional regulator YP_014344.1 1766946 R 265669 CDS YP_014345.1 46907956 2799904 complement(1767435..1768418) 1 NC_002973.6 identified by match to protein family HMM PF01408; Gfo/Idh/MocA family oxidoreductase 1768418 2799904 LMOf2365_1750 Listeria monocytogenes serotype 4b str. F2365 Gfo/Idh/MocA family oxidoreductase YP_014345.1 1767435 R 265669 CDS YP_014346.1 46907957 2799905 complement(1768478..1769443) 1 NC_002973.6 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 1769443 2799905 LMOf2365_1751 Listeria monocytogenes serotype 4b str. F2365 LacI family transcriptional regulator YP_014346.1 1768478 R 265669 CDS YP_014347.1 46907958 2799454 complement(1769491..1772745) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1827; match to protein family HMM TIGR01612; hypothetical protein 1772745 2799454 LMOf2365_1752 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014347.1 1769491 R 265669 CDS YP_014348.1 46907959 2799486 complement(1772748..1774919) 1 NC_002973.6 identified by similarity to SP:P33363; match to protein family HMM PF00933; match to protein family HMM PF01915; beta-glucosidase 1774919 bglX-1 2799486 bglX-1 Listeria monocytogenes serotype 4b str. F2365 beta-glucosidase YP_014348.1 1772748 R 265669 CDS YP_014349.1 46907960 2798116 1775348..1776592 1 NC_002973.6 identified by match to protein family HMM PF01547; ABC transporter substrate-binding protein 1776592 2798116 LMOf2365_1754 Listeria monocytogenes serotype 4b str. F2365 ABC transporter substrate-binding protein YP_014349.1 1775348 D 265669 CDS YP_014350.1 46907961 2799581 1776653..1777546 1 NC_002973.6 identified by match to protein family HMM PF00528; ABC transporter permease 1777546 2799581 LMOf2365_1755 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_014350.1 1776653 D 265669 CDS YP_014351.1 46907962 2799496 1777564..1778394 1 NC_002973.6 identified by match to protein family HMM PF00528; ABC transporter permease 1778394 2799496 LMOf2365_1756 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_014351.1 1777564 D 265669 CDS YP_014352.1 46907963 2798295 complement(1778439..1779908) 1 NC_002973.6 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase 1779908 gltD 2798295 gltD Listeria monocytogenes serotype 4b str. F2365 glutamate synthase YP_014352.1 1778439 R 265669 CDS YP_014353.1 46907964 2799444 complement(1779923..1784515) 1 NC_002973.6 identified by similarity to SP:P39812; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04897; match to protein family HMM PF04898; match to protein family HMM TIGR01612; glutamate synthase 1784515 gltB 2799444 gltB Listeria monocytogenes serotype 4b str. F2365 glutamate synthase YP_014353.1 1779923 R 265669 CDS YP_014354.1 46907965 2799445 1784708..1785595 1 NC_002973.6 identified by similarity to SP:P20668; match to protein family HMM PF00126; match to protein family HMM PF03466; GltC family transcriptional regulator 1785595 gltC 2799445 gltC Listeria monocytogenes serotype 4b str. F2365 GltC family transcriptional regulator YP_014354.1 1784708 D 265669 CDS YP_014355.1 46907966 2799447 complement(1785592..1786110) 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 1786110 2799447 LMOf2365_1760 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_014355.1 1785592 R 265669 CDS YP_014356.1 46907967 2799563 complement(1786113..1787216) 1 NC_002973.6 identified by match to protein family HMM PF00465; alcohol dehydrogenase, iron-dependent 1787216 2799563 LMOf2365_1761 Listeria monocytogenes serotype 4b str. F2365 alcohol dehydrogenase, iron-dependent YP_014356.1 1786113 R 265669 CDS YP_014357.1 46907968 2797964 complement(1787311..1788126) 1 NC_002973.6 identified by similarity to SP:P10344; match to protein family HMM PF00497; amino acid ABC transporter substrate-binding protein 1788126 2797964 LMOf2365_1762 Listeria monocytogenes serotype 4b str. F2365 amino acid ABC transporter substrate-binding protein YP_014357.1 1787311 R 265669 CDS YP_014358.1 46907969 2799432 complement(1788128..1788775) 1 NC_002973.6 identified by similarity to SP:P10346; match to protein family HMM PF00005; amino acid ABC transporter ATP-binding protein 1788775 2799432 LMOf2365_1763 Listeria monocytogenes serotype 4b str. F2365 amino acid ABC transporter ATP-binding protein YP_014358.1 1788128 R 265669 CDS YP_014359.1 46907970 2799568 complement(1788786..1789427) 1 NC_002973.6 identified by similarity to SP:P76315; match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter permease 1789427 2799568 LMOf2365_1764 Listeria monocytogenes serotype 4b str. F2365 amino acid ABC transporter permease YP_014359.1 1788786 R 265669 CDS YP_014360.1 46907971 2798066 complement(1789825..1790865) 1 NC_002973.6 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 1790865 2798066 LMOf2365_1766 Listeria monocytogenes serotype 4b str. F2365 sensor histidine kinase YP_014360.1 1789825 R 265669 CDS YP_014361.1 46907972 2798940 complement(1790887..1792626) 1 NC_002973.6 identified by match to protein family HMM PF01979; match to protein family HMM TIGR01178; adenine deaminase 1792626 ade 2798940 ade Listeria monocytogenes serotype 4b str. F2365 adenine deaminase YP_014361.1 1790887 R 265669 CDS YP_014362.1 46907973 2798941 complement(1792646..1793104) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1842; hypothetical protein 1793104 2798941 LMOf2365_1768 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014362.1 1792646 R 265669 CDS YP_014363.1 46907974 2799575 complement(1793125..1794000) 1 NC_002973.6 hypothetical protein 1794000 2799575 LMOf2365_1769 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014363.1 1793125 R 265669 CDS YP_014364.1 46907975 2799642 complement(1794070..1794747) 1 NC_002973.6 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1794747 2799642 LMOf2365_1770 Listeria monocytogenes serotype 4b str. F2365 DNA-binding response regulator YP_014364.1 1794070 R 265669 CDS YP_014365.1 46907976 2797311 complement(1794810..1796789) 1 NC_002973.6 identified by match to protein family HMM PF02687; ABC transporter permease 1796789 2797311 LMOf2365_1771 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_014365.1 1794810 R 265669 CDS YP_014366.1 46907977 2797077 complement(1796779..1797546) 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1797546 2797077 LMOf2365_1772 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_014366.1 1796779 R 265669 CDS YP_014367.1 46907978 2798122 complement(1797675..1798184) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1847; hypothetical protein 1798184 2798122 LMOf2365_1773 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014367.1 1797675 R 265669 CDS YP_014368.1 46907979 2797473 1798408..1798881 1 NC_002973.6 identified by match to protein family HMM PF01202; shikimate kinase 1798881 aroK 2797473 aroK Listeria monocytogenes serotype 4b str. F2365 shikimate kinase YP_014368.1 1798408 D 265669 CDS YP_014369.1 46907980 2797474 complement(1798912..1799466) 1 NC_002973.6 hypothetical protein 1799466 2797474 LMOf2365_1775 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014369.1 1798912 R 265669 CDS YP_014370.1 46907981 2797541 complement(1799801..1801162) 1 NC_002973.6 identified by match to protein family HMM PF01938; match to protein family HMM PF05958; match to protein family HMM TIGR00479; RNA methyltransferase 1801162 2797541 LMOf2365_1776 Listeria monocytogenes serotype 4b str. F2365 RNA methyltransferase YP_014370.1 1799801 R 265669 CDS YP_014371.1 46907982 2798133 complement(1801186..1801941) 1 NC_002973.6 hypothetical protein 1801941 2798133 LMOf2365_1777 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014371.1 1801186 R 265669 CDS YP_014372.1 46907983 2797775 complement(1802089..1803021) 1 NC_002973.6 similar to YegS from E. coli; lipid kinase 1803021 2797775 LMOf2365_1778 Listeria monocytogenes serotype 4b str. F2365 lipid kinase YP_014372.1 1802089 R 265669 CDS YP_014373.1 46907984 2798128 complement(1803167..1804597) 1 NC_002973.6 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 1804597 gatB 2798128 gatB Listeria monocytogenes serotype 4b str. F2365 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_014373.1 1803167 R 265669 CDS YP_014374.1 46907985 2798144 complement(1804609..1806060) 1 NC_002973.6 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 1806060 gatA 2798144 gatA Listeria monocytogenes serotype 4b str. F2365 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_014374.1 1804609 R 265669 CDS YP_014375.1 46907986 2798145 complement(1806084..1806377) 1 NC_002973.6 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 1806377 gatC 2798145 gatC Listeria monocytogenes serotype 4b str. F2365 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_014375.1 1806084 R 265669 CDS YP_014376.1 46907987 2798147 complement(1806502..1807617) 1 NC_002973.6 lipoprotein 1807617 2798147 LMOf2365_1782 Listeria monocytogenes serotype 4b str. F2365 lipoprotein YP_014376.1 1806502 R 265669 CDS YP_014377.1 46907988 2798136 complement(1807614..1809629) 1 NC_002973.6 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 1809629 ligA 2798136 ligA Listeria monocytogenes serotype 4b str. F2365 NAD-dependent DNA ligase LigA YP_014377.1 1807614 R 265669 CDS YP_014378.1 46907989 2798137 complement(1809655..1811856) 1 NC_002973.6 identified by similarity to SP:P56255; match to protein family HMM PF00580; match to protein family HMM TIGR01073; ATP-dependent DNA helicase PcrA 1811856 pcrA 2798137 pcrA Listeria monocytogenes serotype 4b str. F2365 ATP-dependent DNA helicase PcrA YP_014378.1 1809655 R 265669 CDS YP_014379.1 46907990 2798138 complement(1811915..1812592) 1 NC_002973.6 PcrB-like protein; GGGP synthase; member of prenyltransferases that transfer isoprenoid groups to nonisoprenoid acceptors; functions in form GGGP from glycerol-1-phosphate (G-1-P) and geranylgeranyl pyrophosphate (GGPP); important in lipid metabolism and especially important as the ether linkages in archaea are different than those in bacteria; GGGP synthase lies at the branch point for membrane lipid biosynthesis; cytosolic; T acidophilum protein acts as a homodimer while M thermoautotrophicum protein has been reported to function as a pentamer; geranylgeranylglyceryl phosphate synthase 1812592 2798138 LMOf2365_1785 Listeria monocytogenes serotype 4b str. F2365 geranylgeranylglyceryl phosphate synthase YP_014379.1 1811915 R 265669 CDS YP_014380.1 46907991 2798140 1812799..1814154 1 NC_002973.6 identified by match to protein family HMM PF00209; sodium:neurotransmitter symporter family protein 1814154 2798140 LMOf2365_1786 Listeria monocytogenes serotype 4b str. F2365 sodium:neurotransmitter symporter family protein YP_014380.1 1812799 D 265669 CDS YP_014381.1 46907992 2798141 complement(1814197..1814451) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1861; hypothetical protein 1814451 2798141 LMOf2365_1787 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014381.1 1814197 R 265669 CDS YP_014382.1 46907993 2798142 complement(1814468..1814764) 1 NC_002973.6 hypothetical protein 1814764 2798142 LMOf2365_1788 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014382.1 1814468 R 265669 CDS YP_014383.1 46907994 2798129 complement(1814903..1816165) 1 NC_002973.6 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 1816165 purD 2798129 purD Listeria monocytogenes serotype 4b str. F2365 phosphoribosylamine--glycine ligase YP_014383.1 1814903 R 265669 CDS YP_014384.1 46907995 2798131 complement(1816190..1817719) 1 NC_002973.6 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1817719 purH 2798131 purH Listeria monocytogenes serotype 4b str. F2365 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_014384.1 1816190 R 265669 CDS YP_014385.1 46907996 2798134 complement(1817725..1818291) 1 NC_002973.6 identified by match to protein family HMM PF00551; match to protein family HMM TIGR00639; phosphoribosylglycinamide formyltransferase 1818291 purN 2798134 purN Listeria monocytogenes serotype 4b str. F2365 phosphoribosylglycinamide formyltransferase YP_014385.1 1817725 R 265669 CDS YP_014386.1 46907997 2798119 complement(1818288..1819337) 1 NC_002973.6 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1819337 purM 2798119 purM Listeria monocytogenes serotype 4b str. F2365 phosphoribosylaminoimidazole synthetase YP_014386.1 1818288 R 265669 CDS YP_014387.1 46907998 2798120 complement(1819356..1820783) 1 NC_002973.6 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1820783 purF 2798120 purF Listeria monocytogenes serotype 4b str. F2365 amidophosphoribosyltransferase YP_014387.1 1819356 R 265669 CDS YP_014388.1 46907999 2798124 complement(1820768..1822987) 1 NC_002973.6 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 1822987 purL 2798124 purL Listeria monocytogenes serotype 4b str. F2365 phosphoribosylformylglycinamidine synthase II YP_014388.1 1820768 R 265669 CDS YP_014389.1 46908000 2798125 complement(1822980..1823663) 1 NC_002973.6 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 1823663 purQ 2798125 purQ Listeria monocytogenes serotype 4b str. F2365 phosphoribosylformylglycinamidine synthase I YP_014389.1 1822980 R 265669 CDS YP_014390.1 46908001 2798156 complement(1823667..1823912) 1 NC_002973.6 With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway; phosphoribosylformylglycinamidine synthase subunit PurS 1823912 purS 2798156 purS Listeria monocytogenes serotype 4b str. F2365 phosphoribosylformylglycinamidine synthase subunit PurS YP_014390.1 1823667 R 265669 CDS YP_014391.1 46908002 2799772 complement(1823924..1824637) 1 NC_002973.6 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 1824637 purC 2799772 purC Listeria monocytogenes serotype 4b str. F2365 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_014391.1 1823924 R 265669 CDS YP_014392.1 46908003 2799756 complement(1824718..1826010) 1 NC_002973.6 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1826010 purB 2799756 purB Listeria monocytogenes serotype 4b str. F2365 adenylosuccinate lyase YP_014392.1 1824718 R 265669 CDS YP_014393.1 46908004 2799798 complement(1826029..1827162) 1 NC_002973.6 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 1827162 purK 2799798 purK Listeria monocytogenes serotype 4b str. F2365 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_014393.1 1826029 R 265669 CDS YP_014394.1 46908005 2799818 complement(1827146..1827634) 1 NC_002973.6 Catalyzes a step in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase catalytic subunit 1827634 purE 2799818 purE Listeria monocytogenes serotype 4b str. F2365 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_014394.1 1827146 R 265669 CDS YP_014395.1 46908006 2799803 complement(1827840..1828364) 1 NC_002973.6 hypothetical protein 1828364 2799803 LMOf2365_1801 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014395.1 1827840 R 265669 CDS YP_014396.1 46908007 2799203 complement(1833750..1834358) 1 NC_002973.6 identified by match to protein family HMM PF01966; HD domain-containing protein 1834358 2799203 LMOf2365_1802 Listeria monocytogenes serotype 4b str. F2365 HD domain-containing protein YP_014396.1 1833750 R 265669 CDS YP_014397.1 46908008 2798712 1834412..1835197 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1835197 2798712 LMOf2365_1803 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_014397.1 1834412 D 265669 CDS YP_014398.1 46908009 2799148 1835259..1835609 1 NC_002973.6 identified by similarity to GP:16414392; hypothetical protein 1835609 2799148 LMOf2365_1804 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014398.1 1835259 D 265669 CDS YP_014399.1 46908010 2799093 complement(1835628..1836860) 1 NC_002973.6 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 1836860 pepT 2799093 pepT Listeria monocytogenes serotype 4b str. F2365 peptidase T YP_014399.1 1835628 R 265669 CDS YP_014400.1 46908011 2799079 complement(1836918..1837448) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1880; hypothetical protein 1837448 2799079 LMOf2365_1806 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014400.1 1836918 R 265669 CDS YP_014401.1 46908012 2799080 1837532..1838287 1 NC_002973.6 identified by similarity to SP:P37454; match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease 1838287 exoA 2799080 exoA Listeria monocytogenes serotype 4b str. F2365 exodeoxyribonuclease YP_014401.1 1837532 D 265669 CDS YP_014402.1 46908013 2799288 complement(1838329..1838688) 1 NC_002973.6 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1838688 rplT 2799288 rplT Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L20 YP_014402.1 1838329 R 265669 CDS YP_014403.1 46908014 2799259 complement(1838728..1838928) 1 NC_002973.6 identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 1838928 rpmI 2799259 rpmI Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L35 YP_014403.1 1838728 R 265669 CDS YP_014404.1 46908015 2799921 complement(1838950..1839465) 1 NC_002973.6 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 1839465 infC 2799921 infC Listeria monocytogenes serotype 4b str. F2365 translation initiation factor IF-3 YP_014404.1 1838950 R 265669 CDS YP_014405.1 46908016 2797034 complement(1839491..1839730) 1 NC_002973.6 hypothetical protein 1839730 2797034 LMOf2365_1811 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014405.1 1839491 R 265669 CDS YP_014406.1 46908017 2799463 complement(1839907..1840800) 1 NC_002973.6 identified by similarity to GP:2879768; match to protein family HMM PF00560; internalin family protein 1840800 2799463 LMOf2365_1812 Listeria monocytogenes serotype 4b str. F2365 internalin family protein YP_014406.1 1839907 R 265669 CDS YP_014407.1 46908018 2799548 complement(1840906..1841019) 1 NC_002973.6 hypothetical protein 1841019 2799548 LMOf2365_1813 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014407.1 1840906 R 265669 CDS YP_014408.1 46908019 2799898 complement(1841583..1841927) 1 NC_002973.6 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1841927 rplS 2799898 rplS Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L19 YP_014408.1 1841583 R 265669 CDS YP_014409.1 46908020 2798939 1842121..1842570 1 NC_002973.6 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 1842570 2798939 LMOf2365_1815 Listeria monocytogenes serotype 4b str. F2365 MerR family transcriptional regulator YP_014409.1 1842121 D 265669 CDS YP_014410.1 46908021 2798874 1842570..1843181 1 NC_002973.6 identified by match to protein family HMM PF02525; flavodoxin-like fold domain-containing protein 1843181 2798874 LMOf2365_1816 Listeria monocytogenes serotype 4b str. F2365 flavodoxin-like fold domain-containing protein YP_014410.1 1842570 D 265669 CDS YP_014411.1 46908022 2798868 1843178..1843894 1 NC_002973.6 identified by match to protein family HMM PF00753; metallo-beta-lactamase 1843894 2798868 LMOf2365_1817 Listeria monocytogenes serotype 4b str. F2365 metallo-beta-lactamase YP_014411.1 1843178 D 265669 CDS YP_014412.1 46908023 2798869 complement(1843925..1844314) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1892; hypothetical protein 1844314 2798869 LMOf2365_1818 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014412.1 1843925 R 265669 CDS YP_014413.1 46908024 2798110 complement(1844334..1845071) 1 NC_002973.6 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1845071 trmD 2798110 trmD Listeria monocytogenes serotype 4b str. F2365 tRNA (guanine-N(1)-)-methyltransferase YP_014413.1 1844334 R 265669 CDS YP_014414.1 46908025 2799425 complement(1845071..1845580) 1 NC_002973.6 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1845580 rimM 2799425 rimM Listeria monocytogenes serotype 4b str. F2365 16S rRNA-processing protein RimM YP_014414.1 1845071 R 265669 CDS YP_014415.1 46908026 2798884 complement(1845599..1845985) 1 NC_002973.6 hypothetical protein 1845985 2798884 LMOf2365_1821 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014415.1 1845599 R 265669 CDS YP_014416.1 46908027 2798948 complement(1846013..1846747) 1 NC_002973.6 identified by match to protein family HMM PF00117; glutamine amidotransferase, class-I 1846747 2798948 LMOf2365_1822 Listeria monocytogenes serotype 4b str. F2365 glutamine amidotransferase, class-I YP_014416.1 1846013 R 265669 CDS YP_014417.1 46908028 2798246 complement(1846858..1847088) 1 NC_002973.6 identified by similarity to SP:O31738; hypothetical protein 1847088 2798246 LMOf2365_1823 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014417.1 1846858 R 265669 CDS YP_014418.1 46908029 2798074 complement(1847105..1847377) 1 NC_002973.6 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1847377 rpsP 2798074 rpsP Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S16 YP_014418.1 1847105 R 265669 CDS YP_014419.1 46908030 2798924 complement(1847480..1849138) 1 NC_002973.6 hypothetical protein 1849138 2798924 LMOf2365_1825 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014419.1 1847480 R 265669 CDS YP_014420.1 46908031 2798899 complement(1852098..1852994) 1 NC_002973.6 identified by similarity to SP:Q05918; protein-tyrosine phosphatase 1852994 2798899 LMOf2365_1827 Listeria monocytogenes serotype 4b str. F2365 protein-tyrosine phosphatase YP_014420.1 1852098 R 265669 CDS YP_014421.1 46908032 2798900 complement(1853137..1854489) 1 NC_002973.6 identified by similarity to SP:P37105; match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein 1854489 ffh 2798900 ffh Listeria monocytogenes serotype 4b str. F2365 signal recognition particle protein YP_014421.1 1853137 R 265669 CDS YP_014422.1 46908033 2799850 complement(1854502..1854834) 1 NC_002973.6 identified by match to protein family HMM PF04297; DNA-binding protein 1854834 2799850 LMOf2365_1829 Listeria monocytogenes serotype 4b str. F2365 DNA-binding protein YP_014422.1 1854502 R 265669 CDS YP_014423.1 46908034 2797568 complement(1854947..1855933) 1 NC_002973.6 identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; cell division ABC transporter substrate-binding protein FtsY 1855933 ftsY 2797568 ftsY Listeria monocytogenes serotype 4b str. F2365 cell division ABC transporter substrate-binding protein FtsY YP_014423.1 1854947 R 265669 CDS YP_014424.1 46908035 2797604 complement(1855948..1859508) 1 NC_002973.6 identified by similarity to SP:P51834; match to protein family HMM PF02463; match to protein family HMM PF02483; match to protein family HMM TIGR01612; chromosome segregation protein SMC 1859508 smC 2797604 smC Listeria monocytogenes serotype 4b str. F2365 chromosome segregation protein SMC YP_014424.1 1855948 R 265669 CDS YP_014425.1 46908036 2797630 complement(1859531..1860220) 1 NC_002973.6 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1860220 rnc 2797630 rnc Listeria monocytogenes serotype 4b str. F2365 ribonuclease III YP_014425.1 1859531 R 265669 CDS YP_014426.1 46908037 2797631 complement(1860238..1860330) 1 NC_002973.6 hypothetical protein 1860330 2797631 LMOf2365_1833 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014426.1 1860238 R 265669 CDS YP_014427.1 46908038 2797506 complement(1860415..1860648) 1 NC_002973.6 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1860648 acpP 2797506 acpP Listeria monocytogenes serotype 4b str. F2365 acyl carrier protein YP_014427.1 1860415 R 265669 CDS YP_014428.1 46908039 2797958 complement(1860755..1861498) 1 NC_002973.6 identified by similarity to SP:P51831; match to protein family HMM PF00106; match to protein family HMM TIGR01830; 3-oxoacyl-ACP reductase 1861498 fabG 2797958 fabG Listeria monocytogenes serotype 4b str. F2365 3-oxoacyl-ACP reductase YP_014428.1 1860755 R 265669 CDS YP_014429.1 46908040 2797742 complement(1861502..1862443) 1 NC_002973.6 identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128; ACP S-malonyltransferase 1862443 fabD 2797742 fabD Listeria monocytogenes serotype 4b str. F2365 ACP S-malonyltransferase YP_014429.1 1861502 R 265669 CDS YP_014430.1 46908041 2797788 complement(1862436..1863449) 1 NC_002973.6 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase 1863449 plsX 2797788 plsX Listeria monocytogenes serotype 4b str. F2365 glycerol-3-phosphate acyltransferase YP_014430.1 1862436 R 265669 CDS YP_014431.1 46908042 2798189 complement(1863470..1864039) 1 NC_002973.6 negative regulator of genes involved in fatty acid and phospholipid biosynthesis for gram positive bacteria; fatty acid biosynthesis transcriptional regulator 1864039 2798189 LMOf2365_1838 Listeria monocytogenes serotype 4b str. F2365 fatty acid biosynthesis transcriptional regulator YP_014431.1 1863470 R 265669 CDS YP_014432.1 46908043 2798281 complement(1864221..1866269) 1 NC_002973.6 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1866269 recG 2798281 recG Listeria monocytogenes serotype 4b str. F2365 ATP-dependent DNA helicase RecG YP_014432.1 1864221 R 265669 CDS YP_014433.1 46908044 2799774 complement(1866262..1867152) 1 NC_002973.6 identified by match to protein family HMM PF03313; match to protein family HMM TIGR00718; L-serine dehydratase, iron-sulfur-dependent subunit alpha 1867152 sdhA 2799774 sdhA Listeria monocytogenes serotype 4b str. F2365 L-serine dehydratase, iron-sulfur-dependent subunit alpha YP_014433.1 1866262 R 265669 CDS YP_014434.1 46908045 2799802 complement(1867288..1867950) 1 NC_002973.6 identified by match to protein family HMM PF01842; match to protein family HMM PF03315; match to protein family HMM TIGR00719; L-serine dehydratase, iron-sulfur-dependent subunit beta 1867950 sdhB 2799802 sdhB Listeria monocytogenes serotype 4b str. F2365 L-serine dehydratase, iron-sulfur-dependent subunit beta YP_014434.1 1867288 R 265669 CDS YP_014435.1 46908046 2799826 complement(1867990..1869648) 1 NC_002973.6 identified by match to protein family HMM PF02734; DAK2 domain-containing protein 1869648 2799826 LMOf2365_1842 Listeria monocytogenes serotype 4b str. F2365 DAK2 domain-containing protein YP_014435.1 1867990 R 265669 CDS YP_014436.1 46908047 2799775 complement(1869663..1870028) 1 NC_002973.6 identified by match to protein family HMM PF03780; hypothetical protein 1870028 2799775 LMOf2365_1843 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014436.1 1869663 R 265669 CDS YP_014437.1 46908048 2798334 1870327..1870515 1 NC_002973.6 required for 70S ribosome assembly; 50S ribosomal protein L28 1870515 rpmB 2798334 rpmB Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L28 YP_014437.1 1870327 D 265669 CDS YP_014438.1 46908049 2798550 complement(1870612..1871256) 1 NC_002973.6 identified by match to protein family HMM PF04263; kinase 1871256 2798550 LMOf2365_1845 Listeria monocytogenes serotype 4b str. F2365 kinase YP_014438.1 1870612 R 265669 CDS YP_014439.1 46908050 2798586 complement(1871320..1871976) 1 NC_002973.6 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 1871976 rpe-2 2798586 rpe-2 Listeria monocytogenes serotype 4b str. F2365 ribulose-phosphate 3-epimerase YP_014439.1 1871320 R 265669 CDS YP_014440.1 46908051 2799852 complement(1871979..1872854) 1 NC_002973.6 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 1872854 2799852 LMOf2365_1847 Listeria monocytogenes serotype 4b str. F2365 ribosome-associated GTPase YP_014440.1 1871979 R 265669 CDS YP_014441.1 46908052 2799853 complement(1872873..1874840) 1 NC_002973.6 identified by match to protein family HMM PF00069; match to protein family HMM PF03793; protein kinase 1874840 2799853 LMOf2365_1848 Listeria monocytogenes serotype 4b str. F2365 protein kinase YP_014441.1 1872873 R 265669 CDS YP_014442.1 46908053 2799154 complement(1874837..1875595) 1 NC_002973.6 serine/threonine protein phosphatase 1875595 2799154 LMOf2365_1849 Listeria monocytogenes serotype 4b str. F2365 serine/threonine protein phosphatase YP_014442.1 1874837 R 265669 CDS YP_014443.1 46908054 2799191 complement(1875618..1876952) 1 NC_002973.6 identified by match to protein family HMM PF01029; match to protein family HMM PF01189; match to protein family HMM TIGR00563; sun protein 1876952 sun 2799191 sun Listeria monocytogenes serotype 4b str. F2365 sun protein YP_014443.1 1875618 R 265669 CDS YP_014444.1 46908055 2799160 complement(1876953..1877891) 1 NC_002973.6 identified by match to protein family HMM PF00551; match to protein family HMM PF02911; match to protein family HMM TIGR00460; methionyl-tRNA formyltransferase 1877891 fmt 2799160 fmt Listeria monocytogenes serotype 4b str. F2365 methionyl-tRNA formyltransferase YP_014444.1 1876953 R 265669 CDS YP_014445.1 46908056 2799225 complement(1877905..1880298) 1 NC_002973.6 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 1880298 priA 2799225 priA Listeria monocytogenes serotype 4b str. F2365 primosome assembly protein PriA YP_014445.1 1877905 R 265669 CDS YP_014446.1 46908057 2799209 complement(1880303..1881502) 1 NC_002973.6 identified by match to protein family HMM PF02441; match to protein family HMM PF04127; match to protein family HMM TIGR00521; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 1881502 coaBC 2799209 coaBC Listeria monocytogenes serotype 4b str. F2365 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_014446.1 1880303 R 265669 CDS YP_014447.1 46908058 2799054 complement(1881657..1881863) 1 NC_002973.6 Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 1881863 rpoZ 2799054 rpoZ Listeria monocytogenes serotype 4b str. F2365 DNA-directed RNA polymerase subunit omega YP_014447.1 1881657 R 265669 CDS YP_014448.1 46908059 2799067 complement(1881860..1882477) 1 NC_002973.6 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 1882477 gmk 2799067 gmk Listeria monocytogenes serotype 4b str. F2365 guanylate kinase YP_014448.1 1881860 R 265669 CDS YP_014449.1 46908060 2799029 complement(1882496..1883371) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1929; match to protein family HMM PF03755; match to protein family HMM TIGR00255; hypothetical protein 1883371 2799029 LMOf2365_1856 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014449.1 1882496 R 265669 CDS YP_014450.1 46908061 2799317 1883528..1885240 1 NC_002973.6 identified by similarity to GP:19110786; match to protein family HMM PF05670; match to protein family HMM PF05833; fibronectin/fibrinogen binding protein 1885240 2799317 LMOf2365_1857 Listeria monocytogenes serotype 4b str. F2365 fibronectin/fibrinogen binding protein YP_014450.1 1883528 D 265669 CDS YP_014451.1 46908062 2799864 1885328..1885927 1 NC_002973.6 identified by similarity to GP:4105359; short chain dehydrogenase 1885927 2799864 LMOf2365_1858 Listeria monocytogenes serotype 4b str. F2365 short chain dehydrogenase YP_014451.1 1885328 D 265669 CDS YP_014452.1 46908063 2799865 complement(1885967..1886596) 1 NC_002973.6 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 1886596 pyrE 2799865 pyrE Listeria monocytogenes serotype 4b str. F2365 orotate phosphoribosyltransferase YP_014452.1 1885967 R 265669 CDS YP_014453.1 46908064 2799559 complement(1886593..1887294) 1 NC_002973.6 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 1887294 pyrF 2799559 pyrF Listeria monocytogenes serotype 4b str. F2365 orotidine 5'-phosphate decarboxylase YP_014453.1 1886593 R 265669 CDS YP_014454.1 46908065 2799484 complement(1887291..1888205) 1 NC_002973.6 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway, using a flavin nucleotide as an essential cofactor; subclass 1B is a heterotetramer consisting of two PyrDB subunits, similar to the PyrDA subunits and two PyrK subunits; dihydroorotate dehydrogenase 1B 1888205 pyrD 2799484 pyrD Listeria monocytogenes serotype 4b str. F2365 dihydroorotate dehydrogenase 1B YP_014454.1 1887291 R 265669 CDS YP_014455.1 46908066 2797012 complement(1888202..1888951) 1 NC_002973.6 identified by similarity to SP:P25983; match to protein family HMM PF00175; dihydroorotate dehydrogenase, electron transfer subunit 1888951 pyrDII 2797012 pyrDII Listeria monocytogenes serotype 4b str. F2365 dihydroorotate dehydrogenase, electron transfer subunit YP_014455.1 1888202 R 265669 CDS YP_014456.1 46908067 2799448 complement(1888989..1892201) 1 NC_002973.6 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1892201 carB 2799448 carB Listeria monocytogenes serotype 4b str. F2365 carbamoyl phosphate synthase large subunit YP_014456.1 1888989 R 265669 CDS YP_014457.1 46908068 2797633 complement(1892194..1893285) 1 NC_002973.6 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1893285 carA 2797633 carA Listeria monocytogenes serotype 4b str. F2365 carbamoyl phosphate synthase small subunit YP_014457.1 1892194 R 265669 CDS YP_014458.1 46908069 2798983 complement(1893282..1894562) 1 NC_002973.6 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 1894562 pyrC 2798983 pyrC Listeria monocytogenes serotype 4b str. F2365 dihydroorotase YP_014458.1 1893282 R 265669 CDS YP_014459.1 46908070 2797280 complement(1894550..1895461) 1 NC_002973.6 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 1895461 pyrB 2797280 pyrB Listeria monocytogenes serotype 4b str. F2365 aspartate carbamoyltransferase catalytic subunit YP_014459.1 1894550 R 265669 CDS YP_014460.1 46908071 2798931 complement(1895542..1896828) 1 NC_002973.6 identified by similarity to SP:P41006; match to protein family HMM PF00860; match to protein family HMM TIGR00801; uracil permease 1896828 uraA 2798931 uraA Listeria monocytogenes serotype 4b str. F2365 uracil permease YP_014460.1 1895542 R 265669 CDS YP_014461.1 46908072 2797270 complement(1896957..1897508) 1 NC_002973.6 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 1897508 2797270 LMOf2365_1868 Listeria monocytogenes serotype 4b str. F2365 bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase YP_014461.1 1896957 R 265669 CDS YP_014462.1 46908073 2798245 1897739..1897969 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1942; hypothetical protein 1897969 2798245 LMOf2365_1869 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014462.1 1897739 D 265669 CDS YP_014463.1 46908074 2797385 1898057..1898881 1 NC_002973.6 identified by match to protein family HMM PF01740; STAS domain-containing protein 1898881 2797385 LMOf2365_1870 Listeria monocytogenes serotype 4b str. F2365 STAS domain-containing protein YP_014463.1 1898057 D 265669 CDS YP_014464.1 46908075 2799442 complement(1898899..1899810) 1 NC_002973.6 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase D 1899810 2799442 LMOf2365_1871 Listeria monocytogenes serotype 4b str. F2365 ribosomal large subunit pseudouridine synthase D YP_014464.1 1898899 R 265669 CDS YP_014465.1 46908076 2799113 complement(1899810..1900274) 1 NC_002973.6 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1900274 lspA 2799113 lspA Listeria monocytogenes serotype 4b str. F2365 lipoprotein signal peptidase YP_014465.1 1899810 R 265669 CDS YP_014466.1 46908077 2799096 complement(1900356..1901639) 1 NC_002973.6 identified by similarity to OMNI:NTL01BH2033; match to protein family HMM PF00860; hypothetical protein 1901639 2799096 LMOf2365_1873 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014466.1 1900356 R 265669 CDS YP_014467.1 46908078 2799104 1901813..1903183 1 NC_002973.6 NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; multidrug efflux protein 1903183 2799104 LMOf2365_1874 Listeria monocytogenes serotype 4b str. F2365 multidrug efflux protein YP_014467.1 1901813 D 265669 CDS YP_014468.1 46908079 2799105 complement(1903199..1904131) 1 NC_002973.6 identified by similarity to SP:P31304; match to protein family HMM PF01297; manganese ABC transporter 1904131 2799105 LMOf2365_1875 Listeria monocytogenes serotype 4b str. F2365 manganese ABC transporter YP_014468.1 1903199 R 265669 CDS YP_014469.1 46908080 2799163 complement(1904128..1904970) 1 NC_002973.6 identified by similarity to SP:Q55282; match to protein family HMM PF00950; manganese ABC transporter permease 1904970 2799163 LMOf2365_1876 Listeria monocytogenes serotype 4b str. F2365 manganese ABC transporter permease YP_014469.1 1904128 R 265669 CDS YP_014470.1 46908081 2799219 complement(1904974..1905696) 1 NC_002973.6 identified by similarity to SP:Q55281; match to protein family HMM PF00005; manganese ABC transporter ATP-binding protein 1905696 2799219 LMOf2365_1877 Listeria monocytogenes serotype 4b str. F2365 manganese ABC transporter ATP-binding protein YP_014470.1 1904974 R 265669 CDS YP_014471.1 46908082 2799130 complement(1905856..1906272) 1 NC_002973.6 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1906272 2799130 LMOf2365_1878 Listeria monocytogenes serotype 4b str. F2365 MarR family transcriptional regulator YP_014471.1 1905856 R 265669 CDS YP_014472.1 46908083 2799202 complement(1906309..1907715) 1 NC_002973.6 identified by match to protein family HMM PF00595; match to protein family HMM PF01471; match to protein family HMM PF03572; match to protein family HMM TIGR00225; carboxypeptidase 1907715 2799202 LMOf2365_1879 Listeria monocytogenes serotype 4b str. F2365 carboxypeptidase YP_014472.1 1906309 R 265669 CDS YP_014473.1 46908084 2799250 complement(1907954..1908160) 1 NC_002973.6 identified by match to protein family HMM PF00403; match to protein family HMM TIGR00003; heavy metal-binding protein 1908160 2799250 LMOf2365_1880 Listeria monocytogenes serotype 4b str. F2365 heavy metal-binding protein YP_014473.1 1907954 R 265669 CDS YP_014474.1 46908085 2799251 complement(1908173..1910386) 1 NC_002973.6 identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; copper-translocating P-type ATPase 1910386 2799251 LMOf2365_1881 Listeria monocytogenes serotype 4b str. F2365 copper-translocating P-type ATPase YP_014474.1 1908173 R 265669 CDS YP_014475.1 46908086 2797007 complement(1910401..1910694) 1 NC_002973.6 identified by similarity to OMNI:NTL01BH0559; match to protein family HMM PF02583; hypothetical protein 1910694 2797007 LMOf2365_1882 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014475.1 1910401 R 265669 CDS YP_014476.1 46908087 2799917 complement(1910817..1911641) 1 NC_002973.6 identified by match to protein family HMM PF02557; D-alanyl-D-alanine carboxypeptidase 1911641 2799917 LMOf2365_1883 Listeria monocytogenes serotype 4b str. F2365 D-alanyl-D-alanine carboxypeptidase YP_014476.1 1910817 R 265669 CDS YP_014477.1 46908088 2799503 complement(1911699..1912400) 1 NC_002973.6 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 1912400 deoD 2799503 deoD Listeria monocytogenes serotype 4b str. F2365 purine nucleoside phosphorylase YP_014477.1 1911699 R 265669 CDS YP_014478.1 46908089 2799902 complement(1912412..1912645) 1 NC_002973.6 identified by similarity to OMNI:EF1680; hypothetical protein 1912645 2799902 LMOf2365_1885 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014478.1 1912412 R 265669 CDS YP_014479.1 46908090 2799884 complement(1912708..1913613) 1 NC_002973.6 identified by match to protein family HMM PF01408; Gfo/Idh/MocA family oxidoreductase 1913613 2799884 LMOf2365_1886 Listeria monocytogenes serotype 4b str. F2365 Gfo/Idh/MocA family oxidoreductase YP_014479.1 1912708 R 265669 CDS YP_014480.1 46908091 2798757 complement(1913696..1914133) 1 NC_002973.6 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 1914133 2798757 LMOf2365_1887 Listeria monocytogenes serotype 4b str. F2365 methionine sulfoxide reductase B YP_014480.1 1913696 R 265669 CDS YP_014481.1 46908092 2798758 complement(1914140..1914673) 1 NC_002973.6 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 1914673 msrA 2798758 msrA Listeria monocytogenes serotype 4b str. F2365 methionine sulfoxide reductase A YP_014481.1 1914140 R 265669 CDS YP_014482.1 46908093 2798436 complement(1914709..1915323) 1 NC_002973.6 identified by similarity to OMNI:EF1682; hypothetical protein 1915323 2798436 LMOf2365_1889 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014482.1 1914709 R 265669 CDS YP_014483.1 46908094 2798302 complement(1915339..1916124) 1 NC_002973.6 lipase/acylhydrolase 1916124 2798302 LMOf2365_1890 Listeria monocytogenes serotype 4b str. F2365 lipase/acylhydrolase YP_014483.1 1915339 R 265669 CDS YP_014484.1 46908095 2799812 complement(1916139..1916978) 1 NC_002973.6 identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762; DegV family protein 1916978 2799812 LMOf2365_1892 Listeria monocytogenes serotype 4b str. F2365 DegV family protein YP_014484.1 1916139 R 265669 CDS YP_014485.1 46908096 2799769 1917157..1917789 1 NC_002973.6 identified by similarity to SP:P54176; match to protein family HMM PF03006; match to protein family HMM TIGR01065; hemolysin III 1917789 hlY-III 2799769 hlY-III Listeria monocytogenes serotype 4b str. F2365 hemolysin III YP_014485.1 1917157 D 265669 CDS YP_014486.1 46908097 2798176 1917911..1918528 1 NC_002973.6 identified by similarity to GP:16414480; match to protein family HMM PF00571; hypothetical protein 1918528 2798176 LMOf2365_1894 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014486.1 1917911 D 265669 CDS YP_014487.1 46908098 2798163 1918541..1919353 1 NC_002973.6 identified by similarity to SP:P54470; match to protein family HMM PF03618; hypothetical protein 1919353 2798163 LMOf2365_1895 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014487.1 1918541 D 265669 CDS YP_014488.1 46908099 2797754 1919372..1922011 1 NC_002973.6 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 1922011 ppdK 2797754 ppdK Listeria monocytogenes serotype 4b str. F2365 pyruvate phosphate dikinase YP_014488.1 1919372 D 265669 CDS YP_014489.1 46908100 2799713 complement(1922061..1922438) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1969; hypothetical protein 1922438 2799713 LMOf2365_1897 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014489.1 1922061 R 265669 CDS YP_014490.1 46908101 2799714 complement(1922442..1923425) 1 NC_002973.6 identified by similarity to GP:18145220; match to protein family HMM PF06081; hypothetical protein 1923425 2799714 LMOf2365_1898 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014490.1 1922442 R 265669 CDS YP_014491.1 46908102 2799729 complement(1923519..1924142) 1 NC_002973.6 identified by match to protein family HMM PF00597; DedA family protein 1924142 2799729 LMOf2365_1899 Listeria monocytogenes serotype 4b str. F2365 DedA family protein YP_014491.1 1923519 R 265669 CDS YP_014492.1 46908103 2797555 complement(1924279..1925631) 1 NC_002973.6 identified by similarity to SP:P39790; serine protease 1925631 2797555 LMOf2365_1900 Listeria monocytogenes serotype 4b str. F2365 serine protease YP_014492.1 1924279 R 265669 CDS YP_014493.1 46908104 2797552 complement(1925886..1927397) 1 NC_002973.6 identified by match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphoglucomutase/phosphomannomutase 1927397 2797552 LMOf2365_1901 Listeria monocytogenes serotype 4b str. F2365 phosphoglucomutase/phosphomannomutase YP_014493.1 1925886 R 265669 CDS YP_014494.1 46908105 2798942 complement(1927466..1928296) 1 NC_002973.6 identified by similarity to GP:16414487; hypothetical protein 1928296 2798942 LMOf2365_1902 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014494.1 1927466 R 265669 CDS YP_014495.1 46908106 2798089 complement(1928394..1928876) 1 NC_002973.6 identified by match to protein family HMM PF00186; dihydrofolate reductase 1928876 folA 2798089 folA Listeria monocytogenes serotype 4b str. F2365 dihydrofolate reductase YP_014495.1 1928394 R 265669 CDS YP_014496.1 46908107 2798998 complement(1928892..1929836) 1 NC_002973.6 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 1929836 thyA 2798998 thyA Listeria monocytogenes serotype 4b str. F2365 thymidylate synthase YP_014496.1 1928892 R 265669 CDS YP_014497.1 46908108 2797965 complement(1929849..1931741) 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1931741 2797965 LMOf2365_1905 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_014497.1 1929849 R 265669 CDS YP_014498.1 46908109 2797966 complement(1931861..1933543) 1 NC_002973.6 catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase 1933543 fhs 2797966 fhs Listeria monocytogenes serotype 4b str. F2365 formate--tetrahydrofolate ligase YP_014498.1 1931861 R 265669 CDS YP_014499.1 46908110 2797685 complement(1933701..1934129) 1 NC_002973.6 involved in manganese homeostasis; activates the transcription of the mntABCD operon; manganese transport transcriptional regulator 1934129 2797685 LMOf2365_1907 Listeria monocytogenes serotype 4b str. F2365 manganese transport transcriptional regulator YP_014499.1 1933701 R 265669 CDS YP_014500.1 46908111 2797841 1934494..1934694 1 NC_002973.6 identified by similarity to SP:P51777; match to protein family HMM PF00313; cold-shock domain-contain protein 1934694 2797841 LMOf2365_1908 Listeria monocytogenes serotype 4b str. F2365 cold-shock domain-contain protein YP_014500.1 1934494 D 265669 CDS YP_014501.1 46908112 2797662 1934818..1935219 1 NC_002973.6 identified by match to protein family HMM PF00075; ribonuclease HI 1935219 rnhA 2797662 rnhA Listeria monocytogenes serotype 4b str. F2365 ribonuclease HI YP_014501.1 1934818 D 265669 CDS YP_014502.1 46908113 2797761 complement(1935238..1936110) 1 NC_002973.6 identified by similarity to SP:P54161; match to protein family HMM PF01367; match to protein family HMM PF02739; 5'-3' exonuclease 1936110 2797761 LMOf2365_1910 Listeria monocytogenes serotype 4b str. F2365 5'-3' exonuclease YP_014502.1 1935238 R 265669 CDS YP_014503.1 46908114 2797658 complement(1936188..1936457) 1 NC_002973.6 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 1936457 rpsN 2797658 rpsN Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S14 YP_014503.1 1936188 R 265669 CDS YP_014504.1 46908115 2797697 complement(1936580..1937638) 1 NC_002973.6 identified by similarity to GP:4587115; match to protein family HMM PF00704; chitinase 1937638 2797697 LMOf2365_1912 Listeria monocytogenes serotype 4b str. F2365 chitinase YP_014504.1 1936580 R 265669 CDS YP_014505.1 46908116 2797653 complement(1937830..1939137) 1 NC_002973.6 identified by similarity to SP:P42086; match to protein family HMM PF00860; match to protein family HMM TIGR00801; xanthine permease 1939137 pbuX 2797653 pbuX Listeria monocytogenes serotype 4b str. F2365 xanthine permease YP_014505.1 1937830 R 265669 CDS YP_014506.1 46908117 2797715 complement(1939144..1939722) 1 NC_002973.6 Catalyzes the transfer of the phosphoribosyl moiety from 5-phospho--D-ribosyl-1-pyrophosphate (PRib-PP) to the 6-oxo-guanine and -xanthine; xanthine phosphoribosyltransferase 1939722 xpt 2797715 xpt Listeria monocytogenes serotype 4b str. F2365 xanthine phosphoribosyltransferase YP_014506.1 1939144 R 265669 CDS YP_014507.1 46908118 2797639 complement(1939950..1941473) 1 NC_002973.6 identified by similarity to SP:P42663; match to protein family HMM PF02074; thermostable carboxypeptidase 1941473 2797639 LMOf2365_1915 Listeria monocytogenes serotype 4b str. F2365 thermostable carboxypeptidase YP_014507.1 1939950 R 265669 CDS YP_014508.1 46908119 2797640 complement(1941478..1942626) 1 NC_002973.6 identified by similarity to SP:P50840; match to protein family HMM PF01170; hypothetical protein 1942626 2797640 LMOf2365_1916 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014508.1 1941478 R 265669 CDS YP_014509.1 46908120 2797705 complement(1942702..1943037) 1 NC_002973.6 identified by similarity to PIR:AG1682; hypothetical protein 1943037 2797705 LMOf2365_1916.5 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014509.1 1942702 R 265669 CDS YP_014510.1 46908121 2797863 complement(1943206..1943547) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1989; match to protein family HMM PF05103; hypothetical protein 1943547 2797863 LMOf2365_1917 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014510.1 1943206 R 265669 CDS YP_014511.1 46908122 2797864 complement(1943679..1944224) 1 NC_002973.6 hypothetical protein 1944224 2797864 LMOf2365_1918 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014511.1 1943679 R 265669 CDS YP_014512.1 46908123 2798478 complement(1944221..1944586) 1 NC_002973.6 identified by similarity to SP:P50833; hypothetical protein 1944586 2798478 LMOf2365_1919 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014512.1 1944221 R 265669 CDS YP_014513.1 46908124 2797902 1944833..1945438 1 NC_002973.6 functions in homologous recombination, DNA repair, and chromosome segregation; binds preferentially to three- and four-stranded DNA intermediates; introduces specific nick sites in four-stranded DNA substrates; functions similarly to Escherichia coli RuvC; Holliday junction-specific endonuclease 1945438 recU 2797902 recU Listeria monocytogenes serotype 4b str. F2365 Holliday junction-specific endonuclease YP_014513.1 1944833 D 265669 CDS YP_014514.1 46908125 2799789 1945470..1947953 1 NC_002973.6 identified by match to protein family HMM PF00041; match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074; penicillin-binding protein 1947953 2799789 LMOf2365_1921 Listeria monocytogenes serotype 4b str. F2365 penicillin-binding protein YP_014514.1 1945470 D 265669 CDS YP_014515.1 46908126 2798729 complement(1947996..1948487) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI1994; hypothetical protein 1948487 2798729 LMOf2365_1922 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014515.1 1947996 R 265669 CDS YP_014516.1 46908127 2798507 complement(1948480..1949139) 1 NC_002973.6 identified by similarity to SP:P39788; match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III 1949139 nth 2798507 nth Listeria monocytogenes serotype 4b str. F2365 endonuclease III YP_014516.1 1948480 R 265669 CDS YP_014517.1 46908128 2798581 complement(1949150..1949869) 1 NC_002973.6 identified by similarity to SP:P39787; match to protein family HMM PF04271; match to protein family HMM TIGR01446; DNA replication protein DnaD 1949869 dnaD 2798581 dnaD Listeria monocytogenes serotype 4b str. F2365 DNA replication protein DnaD YP_014517.1 1949150 R 265669 CDS YP_014518.1 46908129 2799506 complement(1950019..1951311) 1 NC_002973.6 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 1951311 asnC 2799506 asnC Listeria monocytogenes serotype 4b str. F2365 asparaginyl-tRNA synthetase YP_014518.1 1950019 R 265669 CDS YP_014519.1 46908130 2798780 complement(1951325..1952506) 1 NC_002973.6 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1952506 2798780 LMOf2365_1926 Listeria monocytogenes serotype 4b str. F2365 aspartate aminotransferase YP_014519.1 1951325 R 265669 CDS YP_014520.1 46908131 2799172 complement(1952529..1953035) 1 NC_002973.6 hypothetical protein 1953035 2799172 LMOf2365_1927 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014520.1 1952529 R 265669 CDS YP_014521.1 46908132 2799173 complement(1953158..1955944) 1 NC_002973.6 unwinds DNA; bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon 1955944 2799173 LMOf2365_1928 Listeria monocytogenes serotype 4b str. F2365 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon YP_014521.1 1953158 R 265669 CDS YP_014522.1 46908133 2799497 complement(1956041..1956424) 1 NC_002973.6 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 1956424 panD 2799497 panD Listeria monocytogenes serotype 4b str. F2365 aspartate alpha-decarboxylase YP_014522.1 1956041 R 265669 CDS YP_014523.1 46908134 2799703 complement(1956428..1957285) 1 NC_002973.6 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 1957285 panC 2799703 panC Listeria monocytogenes serotype 4b str. F2365 pantoate--beta-alanine ligase YP_014523.1 1956428 R 265669 CDS YP_014524.1 46908135 2797832 complement(1957289..1958122) 1 NC_002973.6 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 1958122 panB 2797832 panB Listeria monocytogenes serotype 4b str. F2365 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_014524.1 1957289 R 265669 CDS YP_014525.1 46908136 2797837 complement(1958289..1958762) 1 NC_002973.6 identified by similarity to SP:P37249; bacteriocin transport accessory protein 1958762 2797837 LMOf2365_1932 Listeria monocytogenes serotype 4b str. F2365 bacteriocin transport accessory protein YP_014525.1 1958289 R 265669 CDS YP_014526.1 46908137 2797811 complement(1958910..1959887) 1 NC_002973.6 identified by match to protein family HMM PF02237; match to protein family HMM PF03099; match to protein family HMM TIGR00121; birA bifunctional protein 1959887 birA 2797811 birA Listeria monocytogenes serotype 4b str. F2365 birA bifunctional protein YP_014526.1 1958910 R 265669 CDS YP_014527.1 46908138 2799628 complement(1959877..1961058) 1 NC_002973.6 catalyzes the addition and repair of the 3'-terminal CCA sequence in tRNA; these proteins belong to the CCA-adding enzyme subfamily 2 which does not have phosphohydrolase activity; tRNA CCA-pyrophosphorylase 1961058 2799628 LMOf2365_1934 Listeria monocytogenes serotype 4b str. F2365 tRNA CCA-pyrophosphorylase YP_014527.1 1959877 R 265669 CDS YP_014528.1 46908139 2799655 complement(1961073..1961477) 1 NC_002973.6 catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 1961477 mgsA 2799655 mgsA Listeria monocytogenes serotype 4b str. F2365 methylglyoxal synthase YP_014528.1 1961073 R 265669 CDS YP_014529.1 46908140 2799510 complement(1961493..1962284) 1 NC_002973.6 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 1962284 dapB 2799510 dapB Listeria monocytogenes serotype 4b str. F2365 dihydrodipicolinate reductase YP_014529.1 1961493 R 265669 CDS YP_014530.1 46908141 2799518 complement(1962281..1962616) 1 NC_002973.6 identified by similarity to SP:P42979; match to protein family HMM PF03819; hypothetical protein 1962616 2799518 LMOf2365_1937 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014530.1 1962281 R 265669 CDS YP_014531.1 46908142 2797027 1962757..1963623 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2010; match to protein family HMM PF02588; YitT family protein 1963623 2797027 LMOf2365_1938 Listeria monocytogenes serotype 4b str. F2365 YitT family protein YP_014531.1 1962757 D 265669 CDS YP_014532.1 46908143 2799550 complement(1963613..1964719) 1 NC_002973.6 identified by match to protein family HMM PF01266; oxidoreductase, FAD-binding 1964719 2799550 LMOf2365_1939 Listeria monocytogenes serotype 4b str. F2365 oxidoreductase, FAD-binding YP_014532.1 1963613 R 265669 CDS YP_014533.1 46908144 2799551 1965039..1966175 1 NC_002973.6 identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 1966175 2799551 LMOf2365_1940 Listeria monocytogenes serotype 4b str. F2365 diguanylate cyclase YP_014533.1 1965039 D 265669 CDS YP_014534.1 46908145 2799500 1966201..1967328 1 NC_002973.6 identified by similarity to GP:16411365; match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 1967328 2799500 LMOf2365_1941 Listeria monocytogenes serotype 4b str. F2365 diguanylate cyclase YP_014534.1 1966201 D 265669 CDS YP_014535.1 46908146 2799538 1967325..1968329 1 NC_002973.6 hypothetical protein 1968329 2799538 LMOf2365_1942 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014535.1 1967325 D 265669 CDS YP_014536.1 46908147 2799493 1968348..1969031 1 NC_002973.6 identified by match to protein family HMM PF00563; EAL domain-containing protein 1969031 2799493 LMOf2365_1943 Listeria monocytogenes serotype 4b str. F2365 EAL domain-containing protein YP_014536.1 1968348 D 265669 CDS YP_014537.1 46908148 2799537 1969142..1970785 1 NC_002973.6 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 1970785 sfcA 2799537 sfcA Listeria monocytogenes serotype 4b str. F2365 malate dehydrogenase YP_014537.1 1969142 D 265669 CDS YP_014538.1 46908149 2799069 1970788..1971795 1 NC_002973.6 identified by similarity to GP:16266764; match to protein family HMM PF00144; peptidase 1971795 2799069 LMOf2365_1945 Listeria monocytogenes serotype 4b str. F2365 peptidase YP_014538.1 1970788 D 265669 CDS YP_014539.1 46908150 2799278 1972010..1974307 1 NC_002973.6 identified by similarity to SP:P09373; match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255; formate acetyltransferase 1974307 pfl-2 2799278 pfl-2 Listeria monocytogenes serotype 4b str. F2365 formate acetyltransferase YP_014539.1 1972010 D 265669 CDS YP_014540.1 46908151 2799211 complement(1974355..1975620) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2019; match to protein family HMM PF03486; match to protein family HMM TIGR00275; hypothetical protein 1975620 2799211 LMOf2365_1947 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014540.1 1974355 R 265669 CDS YP_014541.1 46908152 2799212 complement(1975730..1976413) 1 NC_002973.6 identified by match to protein family HMM PF04298; hypothetical protein 1976413 2799212 LMOf2365_1948 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014541.1 1975730 R 265669 CDS YP_014542.1 46908153 2799185 complement(1976500..1977096) 1 NC_002973.6 hypothetical protein 1977096 2799185 LMOf2365_1949 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014542.1 1976500 R 265669 CDS YP_014543.1 46908154 2798766 complement(1977184..1977729) 1 NC_002973.6 hypothetical protein 1977729 2798766 LMOf2365_1950 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014543.1 1977184 R 265669 CDS YP_014544.1 46908155 2798807 complement(1977765..1979018) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2023; match to protein family HMM PF00515; hypothetical protein 1979018 2798807 LMOf2365_1951 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014544.1 1977765 R 265669 CDS YP_014545.1 46908156 2798808 complement(1979150..1980436) 1 NC_002973.6 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1980436 aroA 2798808 aroA Listeria monocytogenes serotype 4b str. F2365 3-phosphoshikimate 1-carboxyvinyltransferase YP_014545.1 1979150 R 265669 CDS YP_014546.1 46908157 2799220 complement(1980450..1981553) 1 NC_002973.6 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase 1981553 tyrA 2799220 tyrA Listeria monocytogenes serotype 4b str. F2365 prephenate dehydrogenase YP_014546.1 1980450 R 265669 CDS YP_014547.1 46908158 2798795 complement(1981574..1982656) 1 NC_002973.6 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 1982656 hisC 2798795 hisC Listeria monocytogenes serotype 4b str. F2365 histidinol-phosphate aminotransferase YP_014547.1 1981574 R 265669 CDS YP_014548.1 46908159 2798743 complement(1982656..1983030) 1 NC_002973.6 identified by similarity to SP:P19080; match to protein family HMM TIGR01796; chorismate mutase 1983030 aroH 2798743 aroH Listeria monocytogenes serotype 4b str. F2365 chorismate mutase YP_014548.1 1982656 R 265669 CDS YP_014549.1 46908160 2798754 complement(1983027..1984124) 1 NC_002973.6 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 1984124 aroB 2798754 aroB Listeria monocytogenes serotype 4b str. F2365 3-dehydroquinate synthase YP_014549.1 1983027 R 265669 CDS YP_014550.1 46908161 2798694 complement(1984127..1985293) 1 NC_002973.6 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1985293 aroC 2798694 aroC Listeria monocytogenes serotype 4b str. F2365 chorismate synthase YP_014550.1 1984127 R 265669 CDS YP_014551.1 46908162 2798703 complement(1985497..1985940) 1 NC_002973.6 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1985940 ndk 2798703 ndk Listeria monocytogenes serotype 4b str. F2365 nucleoside diphosphate kinase YP_014551.1 1985497 R 265669 CDS YP_014552.1 46908163 2798719 complement(1985959..1986924) 1 NC_002973.6 identified by similarity to SP:P55785; match to protein family HMM PF00348; heptaprenyl diphosphate synthase, component II 1986924 hepB 2798719 hepB Listeria monocytogenes serotype 4b str. F2365 heptaprenyl diphosphate synthase, component II YP_014552.1 1985959 R 265669 CDS YP_014553.1 46908164 2798670 complement(1986935..1987648) 1 NC_002973.6 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 1987648 ubiE 2798670 ubiE Listeria monocytogenes serotype 4b str. F2365 ubiquinone/menaquinone biosynthesis methyltransferase YP_014553.1 1986935 R 265669 CDS YP_014554.1 46908165 2798682 complement(1987671..1988438) 1 NC_002973.6 identified by similarity to SP:P31112; heptaprenyl diphosphate synthase component I 1988438 2798682 LMOf2365_1961 Listeria monocytogenes serotype 4b str. F2365 heptaprenyl diphosphate synthase component I YP_014554.1 1987671 R 265669 CDS YP_014555.1 46908166 2799611 complement(1988495..1989064) 1 NC_002973.6 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1989064 folE 2799611 folE Listeria monocytogenes serotype 4b str. F2365 GTP cyclohydrolase I YP_014555.1 1988495 R 265669 CDS YP_014556.1 46908167 2798632 complement(1989300..1989575) 1 NC_002973.6 identified by similarity to SP:P02346; match to protein family HMM PF00216; DNA-binding protein HU 1989575 hup 2798632 hup Listeria monocytogenes serotype 4b str. F2365 DNA-binding protein HU YP_014556.1 1989300 R 265669 CDS YP_014557.1 46908168 2798658 complement(1989986..1990966) 1 NC_002973.6 identified by similarity to SP:Q05918; protein-tyrosine phosphatase 1990966 2798658 LMOf2365_1964 Listeria monocytogenes serotype 4b str. F2365 protein-tyrosine phosphatase YP_014557.1 1989986 R 265669 CDS YP_014558.1 46908169 2798659 complement(1991069..1992085) 1 NC_002973.6 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1992085 gpsA 2798659 gpsA Listeria monocytogenes serotype 4b str. F2365 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_014558.1 1991069 R 265669 CDS YP_014559.1 46908170 2798643 complement(1992108..1993418) 1 NC_002973.6 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1993418 engA 2798643 engA Listeria monocytogenes serotype 4b str. F2365 GTP-binding protein EngA YP_014559.1 1992108 R 265669 CDS YP_014560.1 46908171 2798609 complement(1993562..1994707) 1 NC_002973.6 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1994707 rpsA 2798609 rpsA Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S1 YP_014560.1 1993562 R 265669 CDS YP_014561.1 46908172 2798598 complement(1995066..1995740) 1 NC_002973.6 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 1995740 cmk 2798598 cmk Listeria monocytogenes serotype 4b str. F2365 cytidylate kinase YP_014561.1 1995066 R 265669 CDS YP_014562.1 46908173 2798402 complement(1995756..1996718) 1 NC_002973.6 identified by similarity to SP:P30363; match to protein family HMM PF00710; L-asparaginase 1996718 ansA 2798402 ansA Listeria monocytogenes serotype 4b str. F2365 L-asparaginase YP_014562.1 1995756 R 265669 CDS YP_014563.1 46908174 2798622 complement(1996799..1997533) 1 NC_002973.6 identified by match to protein family HMM PF01476; lysM domain-containing protein 1997533 2798622 LMOf2365_1970 Listeria monocytogenes serotype 4b str. F2365 lysM domain-containing protein YP_014563.1 1996799 R 265669 CDS YP_014564.1 46908175 2798554 complement(1997853..1999256) 1 NC_002973.6 identified by similarity to SP:P50729; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM TIGR00614; ATP-dependent DNA helicase RecQ 1999256 2798554 LMOf2365_1971 Listeria monocytogenes serotype 4b str. F2365 ATP-dependent DNA helicase RecQ YP_014564.1 1997853 R 265669 CDS YP_014565.1 46908176 2798568 complement(1999253..2000260) 1 NC_002973.6 identified by similarity to SP:P50728; hypothetical protein 2000260 2798568 LMOf2365_1972 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014565.1 1999253 R 265669 CDS YP_014566.1 46908177 2798569 2000415..2000639 1 NC_002973.6 identified by similarity to SP:P10245; ferredoxin, 4Fe-4S 2000639 2798569 LMOf2365_1973 Listeria monocytogenes serotype 4b str. F2365 ferredoxin, 4Fe-4S YP_014566.1 2000415 D 265669 CDS YP_014567.1 46908178 2798433 complement(2000703..2006714) 1 NC_002973.6 identified by match to protein family HMM TIGR01167; match to protein family HMM TIGR01612; cell wall surface anchor family protein 2006714 2798433 LMOf2365_1974 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_014567.1 2000703 R 265669 CDS YP_014568.1 46908179 2798525 complement(2006980..2007591) 1 NC_002973.6 identified by similarity to SP:P50726; hypothetical protein 2007591 2798525 LMOf2365_1975 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014568.1 2006980 R 265669 CDS YP_014569.1 46908180 2798413 complement(2008033..2008551) 1 NC_002973.6 identified by match to protein family HMM PF03061; cytosolic long-chain acyl-CoA thioester hydrolase 2008551 2798413 LMOf2365_1976 Listeria monocytogenes serotype 4b str. F2365 cytosolic long-chain acyl-CoA thioester hydrolase YP_014569.1 2008033 R 265669 CDS YP_014570.1 46908181 2798532 complement(2008567..2010357) 1 NC_002973.6 identified by similarity to SP:P35164; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase ResE 2010357 resE 2798532 resE Listeria monocytogenes serotype 4b str. F2365 sensor histidine kinase ResE YP_014570.1 2008567 R 265669 CDS YP_014571.1 46908182 2798452 complement(2010458..2011174) 1 NC_002973.6 identified by similarity to SP:P35163; match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator ResD 2011174 resD 2798452 resD Listeria monocytogenes serotype 4b str. F2365 DNA-binding response regulator ResD YP_014571.1 2010458 R 265669 CDS YP_014572.1 46908183 2798489 complement(2011357..2012091) 1 NC_002973.6 identified by similarity to SP:P35159; match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; ribosomal large subunit pseudouridine synthase B 2012091 rluB 2798489 rluB Listeria monocytogenes serotype 4b str. F2365 ribosomal large subunit pseudouridine synthase B YP_014572.1 2011357 R 265669 CDS YP_014573.1 46908184 2798498 complement(2012094..2012690) 1 NC_002973.6 identified by similarity to GP:16414565; match to protein family HMM PF04079; match to protein family HMM TIGR00281; hypothetical protein 2012690 2798498 LMOf2365_1980 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014573.1 2012094 R 265669 CDS YP_014574.1 46908185 2798441 complement(2012687..2013436) 1 NC_002973.6 functions during chromosome segregation; may form a condensin-like structure with SMC and ScpB; segregation and condensation protein A 2013436 scpA 2798441 scpA Listeria monocytogenes serotype 4b str. F2365 segregation and condensation protein A YP_014574.1 2012687 R 265669 CDS YP_014575.1 46908186 2798442 complement(2013452..2014762) 1 NC_002973.6 identified by similarity to SP:P23630; match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048; diaminopimelate decarboxylase 2014762 lysA 2798442 lysA Listeria monocytogenes serotype 4b str. F2365 diaminopimelate decarboxylase YP_014575.1 2013452 R 265669 CDS YP_014576.1 46908187 2798468 complement(2014943..2015761) 1 NC_002973.6 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 2015761 2798468 LMOf2365_1983 Listeria monocytogenes serotype 4b str. F2365 purine nucleoside phosphorylase YP_014576.1 2014943 R 265669 CDS YP_014577.1 46908188 2798422 complement(2015780..2016964) 1 NC_002973.6 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 2016964 deoB 2798422 deoB Listeria monocytogenes serotype 4b str. F2365 phosphopentomutase YP_014577.1 2015780 R 265669 CDS YP_014578.1 46908189 2798391 complement(2016993..2017886) 1 NC_002973.6 identified by similarity to SP:P21891; match to protein family HMM PF00589; match to protein family HMM PF02899; integrase/recombinase XerD 2017886 xerD 2798391 xerD Listeria monocytogenes serotype 4b str. F2365 integrase/recombinase XerD YP_014578.1 2016993 R 265669 CDS YP_014579.1 46908190 2798394 complement(2018041..2018493) 1 NC_002973.6 identified by match to protein family HMM PF01475; FUR family transcriptional regulator 2018493 2798394 LMOf2365_1986 Listeria monocytogenes serotype 4b str. F2365 FUR family transcriptional regulator YP_014579.1 2018041 R 265669 CDS YP_014580.1 46908191 2798373 complement(2018735..2019757) 1 NC_002973.6 identified by similarity to SP:P49937; match to protein family HMM PF01032; iron compound ABC transporter permease 2019757 2798373 LMOf2365_1987 Listeria monocytogenes serotype 4b str. F2365 iron compound ABC transporter permease YP_014580.1 2018735 R 265669 CDS YP_014581.1 46908192 2798381 complement(2019757..2020782) 1 NC_002973.6 identified by similarity to SP:P49936; match to protein family HMM PF01032; iron compound ABC transporter permease 2020782 2798381 LMOf2365_1988 Listeria monocytogenes serotype 4b str. F2365 iron compound ABC transporter permease YP_014581.1 2019757 R 265669 CDS YP_014582.1 46908193 2798360 complement(2020884..2021825) 1 NC_002973.6 identified by similarity to SP:P37580; match to protein family HMM PF01497; iron compound ABC transporter substrate-binding protein 2021825 2798360 LMOf2365_1989 Listeria monocytogenes serotype 4b str. F2365 iron compound ABC transporter substrate-binding protein YP_014582.1 2020884 R 265669 CDS YP_014583.1 46908194 2798361 2021990..2022814 1 NC_002973.6 identified by similarity to SP:P49938; match to protein family HMM PF00005; iron compound ABC transporter ATP-binding protein 2022814 2798361 LMOf2365_1990 Listeria monocytogenes serotype 4b str. F2365 iron compound ABC transporter ATP-binding protein YP_014583.1 2021990 D 265669 CDS YP_014584.1 46908195 2798382 2022804..2023802 1 NC_002973.6 identified by match to protein family HMM PF00070; pyridine nucleotide-disulfide oxidoreductase 2023802 2798382 LMOf2365_1991 Listeria monocytogenes serotype 4b str. F2365 pyridine nucleotide-disulfide oxidoreductase YP_014584.1 2022804 D 265669 CDS YP_014585.1 46908196 2798349 complement(2023819..2024439) 1 NC_002973.6 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2024439 2798349 LMOf2365_1992 Listeria monocytogenes serotype 4b str. F2365 TetR family transcriptional regulator YP_014585.1 2023819 R 265669 CDS YP_014586.1 46908197 2798364 complement(2024439..2025254) 1 NC_002973.6 ABC transporter permease 2025254 2798364 LMOf2365_1993 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_014586.1 2024439 R 265669 CDS YP_014587.1 46908198 2797721 complement(2025251..2026138) 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2026138 2797721 LMOf2365_1994 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_014587.1 2025251 R 265669 CDS YP_014588.1 46908199 2798370 complement(2026612..2027169) 1 NC_002973.6 identified by match to protein family HMM PF00293; MutT/nudix family protein 2027169 2798370 LMOf2365_1995 Listeria monocytogenes serotype 4b str. F2365 MutT/nudix family protein YP_014588.1 2026612 R 265669 CDS YP_014589.1 46908200 2798371 2027443..2028102 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2067; hypothetical protein 2028102 2798371 LMOf2365_1996 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014589.1 2027443 D 265669 CDS YP_014590.1 46908201 2797740 2028080..2029279 1 NC_002973.6 identified by similarity to GP:2429345; tellurite resistance protein 2029279 2797740 LMOf2365_1997 Listeria monocytogenes serotype 4b str. F2365 tellurite resistance protein YP_014590.1 2028080 D 265669 CDS YP_014591.1 46908202 2798339 complement(2029316..2030386) 1 NC_002973.6 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 2030386 2798339 LMOf2365_1998 Listeria monocytogenes serotype 4b str. F2365 DNA polymerase IV YP_014591.1 2029316 R 265669 CDS YP_014592.1 46908203 2798350 complement(2030495..2031286) 1 NC_002973.6 identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase oxidoreductase 2031286 2798350 LMOf2365_1999 Listeria monocytogenes serotype 4b str. F2365 short chain dehydrogenase/reductase oxidoreductase YP_014592.1 2030495 R 265669 CDS YP_014593.1 46908204 2798324 complement(2031291..2032211) 1 NC_002973.6 identified by match to protein family HMM PF00753; metallo-beta-lactamase 2032211 2798324 LMOf2365_2000 Listeria monocytogenes serotype 4b str. F2365 metallo-beta-lactamase YP_014593.1 2031291 R 265669 CDS YP_014594.1 46908205 2798336 complement(2032318..2032443) 1 NC_002973.6 hypothetical protein 2032443 2798336 LMOf2365_2001 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014594.1 2032318 R 265669 CDS YP_014595.1 46908206 2798337 2032512..2033987 1 NC_002973.6 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 2033987 zwf 2798337 zwf Listeria monocytogenes serotype 4b str. F2365 glucose-6-phosphate 1-dehydrogenase YP_014595.1 2032512 D 265669 CDS YP_014596.1 46908207 2798327 2034106..2034537 1 NC_002973.6 hypothetical protein 2034537 2798327 LMOf2365_2003 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014596.1 2034106 D 265669 CDS YP_014597.1 46908208 2799835 complement(2034689..2035174) 1 NC_002973.6 hypothetical protein 2035174 2799835 LMOf2365_2004 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014597.1 2034689 R 265669 CDS YP_014598.1 46908209 2799848 complement(2035147..2035674) 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 2035674 2799848 LMOf2365_2005 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_014598.1 2035147 R 265669 CDS YP_014599.1 46908210 2798319 2036365..2038059 1 NC_002973.6 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2038059 ilvD 2798319 ilvD Listeria monocytogenes serotype 4b str. F2365 dihydroxy-acid dehydratase YP_014599.1 2036365 D 265669 CDS YP_014600.1 46908211 2798284 2038077..2039798 1 NC_002973.6 identified by similarity to SP:P37251; match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR00118; acetolactate synthase large subunit 2039798 ilvB 2798284 ilvB Listeria monocytogenes serotype 4b str. F2365 acetolactate synthase large subunit YP_014600.1 2038077 D 265669 CDS YP_014601.1 46908212 2799827 2039799..2040290 1 NC_002973.6 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 2040290 ilvH 2799827 ilvH Listeria monocytogenes serotype 4b str. F2365 acetolactate synthase 3 regulatory subunit YP_014601.1 2039799 D 265669 CDS YP_014602.1 46908213 2798202 2040389..2041384 1 NC_002973.6 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2041384 ilvC 2798202 ilvC Listeria monocytogenes serotype 4b str. F2365 ketol-acid reductoisomerase YP_014602.1 2040389 D 265669 CDS YP_014603.1 46908214 2798203 2041542..2043080 1 NC_002973.6 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 2043080 leuA 2798203 leuA Listeria monocytogenes serotype 4b str. F2365 2-isopropylmalate synthase YP_014603.1 2041542 D 265669 CDS YP_014604.1 46908215 2798283 2043082..2044134 1 NC_002973.6 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 2044134 leuB 2798283 leuB Listeria monocytogenes serotype 4b str. F2365 3-isopropylmalate dehydrogenase YP_014604.1 2043082 D 265669 CDS YP_014605.1 46908216 2797908 2044136..2045524 1 NC_002973.6 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 2045524 leuC 2797908 leuC Listeria monocytogenes serotype 4b str. F2365 isopropylmalate isomerase large subunit YP_014605.1 2044136 D 265669 CDS YP_014606.1 46908217 2798230 2045511..2046092 1 NC_002973.6 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 2046092 leuD 2798230 leuD Listeria monocytogenes serotype 4b str. F2365 isopropylmalate isomerase small subunit YP_014606.1 2045511 D 265669 CDS YP_014607.1 46908218 2797888 2046111..2047379 1 NC_002973.6 catalyzes the formation of 2-oxobutanoate from L-threonine; biosynthetic; threonine dehydratase 2047379 ilvA 2797888 ilvA Listeria monocytogenes serotype 4b str. F2365 threonine dehydratase YP_014607.1 2046111 D 265669 CDS YP_014608.1 46908219 2797892 2047572..2048291 1 NC_002973.6 identified by match to protein family HMM PF03306; match to protein family HMM TIGR01252; alpha-acetolactate decarboxylase 2048291 budA 2797892 budA Listeria monocytogenes serotype 4b str. F2365 alpha-acetolactate decarboxylase YP_014608.1 2047572 D 265669 CDS YP_014609.1 46908220 2797898 complement(2048328..2049629) 1 NC_002973.6 Catalyzes the reversible phosphorolysis of pyrimidines in the nucleotide synthesis salvage pathway; pyrimidine-nucleoside phosphorylase 2049629 pyn 2797898 pyn Listeria monocytogenes serotype 4b str. F2365 pyrimidine-nucleoside phosphorylase YP_014609.1 2048328 R 265669 CDS YP_014610.1 46908221 2797876 complement(2049760..2050770) 1 NC_002973.6 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 2050770 2797876 LMOf2365_2017 Listeria monocytogenes serotype 4b str. F2365 LacI family transcriptional regulator YP_014610.1 2049760 R 265669 CDS YP_014611.1 46908222 2797883 complement(2050850..2051521) 1 NC_002973.6 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 2051521 deoC 2797883 deoC Listeria monocytogenes serotype 4b str. F2365 deoxyribose-phosphate aldolase YP_014611.1 2050850 R 265669 CDS YP_014612.1 46908223 2797868 complement(2051584..2052531) 1 NC_002973.6 identified by similarity to SP:P39140; match to protein family HMM PF04198; DeoR family transcriptional regulator 2052531 deoR 2797868 deoR Listeria monocytogenes serotype 4b str. F2365 DeoR family transcriptional regulator YP_014612.1 2051584 R 265669 CDS YP_014613.1 46908224 2797708 complement(2052629..2053045) 1 NC_002973.6 identified by match to protein family HMM PF03610; match to protein family HMM TIGR00824; PTS system mannose/fructose/sorbose family transporter subunit IIA 2053045 2797708 LMOf2365_2020 Listeria monocytogenes serotype 4b str. F2365 PTS system mannose/fructose/sorbose family transporter subunit IIA YP_014613.1 2052629 R 265669 CDS YP_014614.1 46908225 2797709 complement(2053062..2054057) 1 NC_002973.6 identified by similarity to GP:16414620; hypothetical protein 2054057 2797709 LMOf2365_2021 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014614.1 2053062 R 265669 CDS YP_014615.1 46908226 2797859 complement(2054080..2055135) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2094; match to protein family HMM PF01380; SIS domain-containing protein 2055135 2797859 LMOf2365_2022 Listeria monocytogenes serotype 4b str. F2365 SIS domain-containing protein YP_014615.1 2054080 R 265669 CDS YP_014616.1 46908227 2797701 complement(2055157..2055978) 1 NC_002973.6 identified by similarity to SP:P08188; match to protein family HMM PF03613; PTS system mannose/fructose/sorbose family transporter subunit IID 2055978 2797701 LMOf2365_2023 Listeria monocytogenes serotype 4b str. F2365 PTS system mannose/fructose/sorbose family transporter subunit IID YP_014616.1 2055157 R 265669 CDS YP_014617.1 46908228 2797644 complement(2055959..2056777) 1 NC_002973.6 identified by similarity to SP:P08187; match to protein family HMM PF03609; PTS system transporter subunit IIC 2056777 2797644 LMOf2365_2024 Listeria monocytogenes serotype 4b str. F2365 PTS system transporter subunit IIC YP_014617.1 2055959 R 265669 CDS YP_014618.1 46908229 2797719 complement(2056800..2057267) 1 NC_002973.6 identified by similarity to SP:P37081; match to protein family HMM PF03830; PTS system mannose/fructose/sorbose family transporter subunit IIB 2057267 2797719 LMOf2365_2025 Listeria monocytogenes serotype 4b str. F2365 PTS system mannose/fructose/sorbose family transporter subunit IIB YP_014618.1 2056800 R 265669 CDS YP_014619.1 46908230 2797647 complement(2057287..2057988) 1 NC_002973.6 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 2057988 2797647 LMOf2365_2026 Listeria monocytogenes serotype 4b str. F2365 GntR family transcriptional regulator YP_014619.1 2057287 R 265669 CDS YP_014620.1 46908231 2797648 complement(2057990..2058721) 1 NC_002973.6 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 2058721 2797648 LMOf2365_2027 Listeria monocytogenes serotype 4b str. F2365 GntR family transcriptional regulator YP_014620.1 2057990 R 265669 CDS YP_014621.1 46908232 2797678 complement(2058763..2058873) 1 NC_002973.6 hypothetical protein 2058873 2797678 LMOf2365_2028 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014621.1 2058763 R 265669 CDS YP_014622.1 46908233 2797668 complement(2058894..2059889) 1 NC_002973.6 identified by match to protein family HMM PF00248; aldo/keto reductase oxidoreductase 2059889 2797668 LMOf2365_2029 Listeria monocytogenes serotype 4b str. F2365 aldo/keto reductase oxidoreductase YP_014622.1 2058894 R 265669 CDS YP_014623.1 46908234 2797800 complement(2060006..2061703) 1 NC_002973.6 catalyzes the formation of 2-acetolactate from pyruvate in stationary phase; acetolactate synthase 2061703 alsS 2797800 alsS Listeria monocytogenes serotype 4b str. F2365 acetolactate synthase YP_014623.1 2060006 R 265669 CDS YP_014624.1 46908235 2797793 complement(2061898..2063355) 1 NC_002973.6 identified by match to protein family HMM PF01547; ABC transporter substrate-binding protein 2063355 2797793 LMOf2365_2031 Listeria monocytogenes serotype 4b str. F2365 ABC transporter substrate-binding protein YP_014624.1 2061898 R 265669 CDS YP_014625.1 46908236 2797728 complement(2063375..2064295) 1 NC_002973.6 identified by match to protein family HMM PF00528; ABC transporter permease 2064295 2797728 LMOf2365_2032 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_014625.1 2063375 R 265669 CDS YP_014626.1 46908237 2797767 complement(2064365..2065303) 1 NC_002973.6 identified by match to protein family HMM PF00528; ABC transporter permease 2065303 2797767 LMOf2365_2033 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_014626.1 2064365 R 265669 CDS YP_014627.1 46908238 2797768 complement(2065407..2066891) 1 NC_002973.6 identified by match to protein family HMM PF00072; match to protein family HMM PF00165; DNA-binding response regulator 2066891 2797768 LMOf2365_2034 Listeria monocytogenes serotype 4b str. F2365 DNA-binding response regulator YP_014627.1 2065407 R 265669 CDS YP_014628.1 46908239 2797759 complement(2066891..2068630) 1 NC_002973.6 identified by match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 2068630 2797759 LMOf2365_2035 Listeria monocytogenes serotype 4b str. F2365 sensor histidine kinase YP_014628.1 2066891 R 265669 CDS YP_014629.1 46908240 2797822 complement(2068687..2069298) 1 NC_002973.6 identified by match to protein family HMM PF04854; hypothetical protein 2069298 2797822 LMOf2365_2036 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014629.1 2068687 R 265669 CDS YP_014630.1 46908241 2797818 complement(2069359..2070663) 1 NC_002973.6 hypothetical protein 2070663 2797818 LMOf2365_2037 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014630.1 2069359 R 265669 CDS YP_014631.1 46908242 2797724 complement(2070667..2073324) 1 NC_002973.6 identified by match to protein family HMM PF01074; glycosyl hydrolase 2073324 2797724 LMOf2365_2038 Listeria monocytogenes serotype 4b str. F2365 glycosyl hydrolase YP_014631.1 2070667 R 265669 CDS YP_014632.1 46908243 2797846 complement(2073321..2073578) 1 NC_002973.6 hypothetical protein 2073578 2797846 LMOf2365_2039 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014632.1 2073321 R 265669 CDS YP_014633.1 46908244 2797847 2073579..2076677 1 NC_002973.6 identified by similarity to GP:15128487; match to protein family HMM PF01074; alpha-D-mannosidase 2076677 2797847 LMOf2365_2040 Listeria monocytogenes serotype 4b str. F2365 alpha-D-mannosidase YP_014633.1 2073579 D 265669 CDS YP_014634.1 46908245 2797831 complement(2076746..2076946) 1 NC_002973.6 identified by match to protein family HMM PF00313; cold-shock domain-contain protein 2076946 2797831 LMOf2365_2041 Listeria monocytogenes serotype 4b str. F2365 cold-shock domain-contain protein YP_014634.1 2076746 R 265669 CDS YP_014635.1 46908246 2797812 complement(2077235..2077930) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2112; match to protein family HMM PF01569; PAP2 family protein 2077930 2797812 LMOf2365_2042 Listeria monocytogenes serotype 4b str. F2365 PAP2 family protein YP_014635.1 2077235 R 265669 CDS YP_014636.1 46908247 2797774 complement(2077944..2078933) 1 NC_002973.6 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 2078933 dapF 2797774 dapF Listeria monocytogenes serotype 4b str. F2365 diaminopimelate epimerase YP_014636.1 2077944 R 265669 CDS YP_014637.1 46908248 2797681 complement(2079045..2081810) 1 NC_002973.6 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 2081810 ileS 2797681 ileS Listeria monocytogenes serotype 4b str. F2365 isoleucyl-tRNA synthetase YP_014637.1 2079045 R 265669 CDS YP_014638.1 46908249 2797689 complement(2082093..2082620) 1 NC_002973.6 identified by similarity to OMNI:NTL01BS01543; match to protein family HMM PF05103; cell division protein DivIVA 2082620 divIVA 2797689 divIVA Listeria monocytogenes serotype 4b str. F2365 cell division protein DivIVA YP_014638.1 2082093 R 265669 CDS YP_014639.1 46908250 2797030 complement(2082716..2083237) 1 NC_002973.6 identified by match to protein family HMM PF02829; 3H domain-containing protein 2083237 2797030 LMOf2365_2046 Listeria monocytogenes serotype 4b str. F2365 3H domain-containing protein YP_014639.1 2082716 R 265669 CDS YP_014640.1 46908251 2799527 complement(2083242..2084348) 1 NC_002973.6 identified by similarity to SP:P38033; match to protein family HMM PF00266; carbon-sulfur lyase 2084348 2799527 LMOf2365_2047 Listeria monocytogenes serotype 4b str. F2365 carbon-sulfur lyase YP_014640.1 2083242 R 265669 CDS YP_014641.1 46908252 2796993 2084480..2085934 1 NC_002973.6 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 2085934 nadB 2796993 nadB Listeria monocytogenes serotype 4b str. F2365 L-aspartate oxidase YP_014641.1 2084480 D 265669 CDS YP_014642.1 46908253 2798927 2085931..2086776 1 NC_002973.6 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 2086776 nadC 2798927 nadC Listeria monocytogenes serotype 4b str. F2365 nicotinate-nucleotide pyrophosphorylase YP_014642.1 2085931 D 265669 CDS YP_014643.1 46908254 2798085 2086773..2087873 1 NC_002973.6 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 2087873 nadA 2798085 nadA Listeria monocytogenes serotype 4b str. F2365 quinolinate synthetase YP_014643.1 2086773 D 265669 CDS YP_014644.1 46908255 2798060 complement(2088198..2088464) 1 NC_002973.6 identified by similarity to OMNI:NTL01LL0091; IS3 family transposase OrfA 2088464 2798060 LMOf2365_2051 Listeria monocytogenes serotype 4b str. F2365 IS3 family transposase OrfA YP_014644.1 2088198 R 265669 CDS YP_014645.1 46908256 2798061 complement(2088540..2088845) 1 NC_002973.6 identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein 2088845 2798061 LMOf2365_2052 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_014645.1 2088540 R 265669 CDS YP_014646.1 46908257 2798059 complement(2088873..2089358) 1 NC_002973.6 hypothetical protein 2089358 2798059 LMOf2365_2053 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014646.1 2088873 R 265669 CDS YP_014647.1 46908258 2797399 complement(2089378..2089851) 1 NC_002973.6 hypothetical protein 2089851 2797399 LMOf2365_2054 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014647.1 2089378 R 265669 CDS YP_014648.1 46908259 2797053 complement(2089917..2091911) 1 NC_002973.6 identified by similarity to GP:6690597; hypothetical protein 2091911 2797053 LMOf2365_2055 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014648.1 2089917 R 265669 CDS YP_014649.1 46908260 2799238 complement(2092046..2094127) 1 NC_002973.6 identified by similarity to GP:6690597; hypothetical protein 2094127 2799238 LMOf2365_2056 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014649.1 2092046 R 265669 CDS YP_014650.1 46908261 2799709 complement(2094391..2095929) 1 NC_002973.6 identified by similarity to OMNI:NTL01LM0455; hypothetical protein 2095929 2799709 LMOf2365_2057 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014650.1 2094391 R 265669 CDS YP_014651.1 46908262 2799710 complement(2095951..2096730) 1 NC_002973.6 identified by similarity to GP:9965182; methyltransferase 2096730 2799710 LMOf2365_2058 Listeria monocytogenes serotype 4b str. F2365 methyltransferase YP_014651.1 2095951 R 265669 CDS YP_014652.1 46908263 2798316 complement(2096758..2097351) 1 NC_002973.6 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2097351 2798316 LMOf2365_2059 Listeria monocytogenes serotype 4b str. F2365 TetR family transcriptional regulator YP_014652.1 2096758 R 265669 CDS YP_014653.1 46908264 2799062 complement(2098525..2099301) 1 NC_002973.6 identified by match to protein family HMM PF01479; S4 domain-containing protein 2099301 2799062 LMOf2365_2060 Listeria monocytogenes serotype 4b str. F2365 S4 domain-containing protein YP_014653.1 2098525 R 265669 CDS YP_014654.1 46908265 2799131 complement(2099426..2099716) 1 NC_002973.6 identified by match to protein family HMM PF02325; hypothetical protein 2099716 2799131 LMOf2365_2061 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014654.1 2099426 R 265669 CDS YP_014655.1 46908266 2798794 complement(2099739..2100197) 1 NC_002973.6 identified by similarity to OMNI:NTL01BH2552; match to protein family HMM PF04472; hypothetical protein 2100197 2798794 LMOf2365_2062 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014655.1 2099739 R 265669 CDS YP_014656.1 46908267 2798590 complement(2100201..2100890) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2124; match to protein family HMM PF01168; match to protein family HMM TIGR00044; hypothetical protein 2100890 2798590 LMOf2365_2063 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014656.1 2100201 R 265669 CDS YP_014657.1 46908268 2798591 complement(2101009..2102184) 1 NC_002973.6 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 2102184 ftsZ 2798591 ftsZ Listeria monocytogenes serotype 4b str. F2365 cell division protein FtsZ YP_014657.1 2101009 R 265669 CDS YP_014658.1 46908269 2798557 complement(2102251..2103531) 1 NC_002973.6 identified by similarity to SP:P28264; match to protein family HMM PF02491; match to protein family HMM TIGR01174; cell division protein FtsA 2103531 ftsA 2798557 ftsA Listeria monocytogenes serotype 4b str. F2365 cell division protein FtsA YP_014658.1 2102251 R 265669 CDS YP_014659.1 46908270 2799843 complement(2103897..2104709) 1 NC_002973.6 identified by match to protein family HMM PF03799; cell division protein FtsQ 2104709 2799843 LMOf2365_2066 Listeria monocytogenes serotype 4b str. F2365 cell division protein FtsQ YP_014659.1 2103897 R 265669 CDS YP_014660.1 46908271 2798292 complement(2104732..2105823) 1 NC_002973.6 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 2105823 murG 2798292 murG Listeria monocytogenes serotype 4b str. F2365 UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_014660.1 2104732 R 265669 CDS YP_014661.1 46908272 2798221 complement(2105820..2107187) 1 NC_002973.6 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 2107187 murD 2798221 murD Listeria monocytogenes serotype 4b str. F2365 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_014661.1 2105820 R 265669 CDS YP_014662.1 46908273 2797144 complement(2107329..2108291) 1 NC_002973.6 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 2108291 mraY 2797144 mraY Listeria monocytogenes serotype 4b str. F2365 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_014662.1 2107329 R 265669 CDS YP_014663.1 46908274 2797029 complement(2108350..2109825) 1 NC_002973.6 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 2109825 murE 2797029 murE Listeria monocytogenes serotype 4b str. F2365 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_014663.1 2108350 R 265669 CDS YP_014664.1 46908275 2799471 complement(2110000..2112255) 1 NC_002973.6 identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF03793; penicillin-binding protein 2112255 2799471 LMOf2365_2071 Listeria monocytogenes serotype 4b str. F2365 penicillin-binding protein YP_014664.1 2110000 R 265669 CDS YP_014665.1 46908276 2799596 complement(2112252..2112614) 1 NC_002973.6 identified by similarity to SP:Q07867; cell division protein FtsL 2112614 2799596 LMOf2365_2072 Listeria monocytogenes serotype 4b str. F2365 cell division protein FtsL YP_014665.1 2112252 R 265669 CDS YP_014666.1 46908277 2798115 complement(2112631..2113569) 1 NC_002973.6 identified by similarity to SP:Q929X6; match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW 2113569 mraW 2798115 mraW Listeria monocytogenes serotype 4b str. F2365 S-adenosyl-methyltransferase MraW YP_014666.1 2112631 R 265669 CDS YP_014667.1 46908278 2798237 complement(2113582..2114013) 1 NC_002973.6 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 2114013 mraZ 2798237 mraZ Listeria monocytogenes serotype 4b str. F2365 cell division protein MraZ YP_014667.1 2113582 R 265669 CDS YP_014668.1 46908279 2798051 complement(2114216..2115463) 1 NC_002973.6 hypothetical protein 2115463 2798051 LMOf2365_2075 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014668.1 2114216 R 265669 CDS YP_014669.1 46908280 2798300 2115581..2117395 1 NC_002973.6 identified by match to protein family HMM PF00496; solute-binding family 5 protein 2117395 2798300 LMOf2365_2076 Listeria monocytogenes serotype 4b str. F2365 solute-binding family 5 protein YP_014669.1 2115581 D 265669 CDS YP_014670.1 46908281 2798312 complement(2117703..2118596) 1 NC_002973.6 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 2118596 panE 2798312 panE Listeria monocytogenes serotype 4b str. F2365 2-dehydropantoate 2-reductase YP_014670.1 2117703 R 265669 CDS YP_014671.1 46908282 2799624 complement(2118746..2118919) 1 NC_002973.6 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 2118919 rpmF 2799624 rpmF Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L32 YP_014671.1 2118746 R 265669 CDS YP_014672.1 46908283 2798040 complement(2119010..2119546) 1 NC_002973.6 identified by similarity to GP:10175205; match to protein family HMM PF02620; hypothetical protein 2119546 2798040 LMOf2365_2079 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014672.1 2119010 R 265669 CDS YP_014673.1 46908284 2798041 2119676..2120848 1 NC_002973.6 identified by match to protein family HMM PF05636; hypothetical protein 2120848 2798041 LMOf2365_2080 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014673.1 2119676 D 265669 CDS YP_014674.1 46908285 2798249 2120930..2123170 1 NC_002973.6 identified by similarity to GP:1196907; match to protein family HMM PF00005; daunorubicin resistance protein 2123170 drrC 2798249 drrC Listeria monocytogenes serotype 4b str. F2365 daunorubicin resistance protein YP_014674.1 2120930 D 265669 CDS YP_014675.1 46908286 2798981 complement(2123213..2124253) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2144; hypothetical protein 2124253 2798981 LMOf2365_2082 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014675.1 2123213 R 265669 CDS YP_014676.1 46908287 2798760 complement(2124272..2124754) 1 NC_002973.6 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 2124754 coaD 2798760 coaD Listeria monocytogenes serotype 4b str. F2365 phosphopantetheine adenylyltransferase YP_014676.1 2124272 R 265669 CDS YP_014677.1 46908288 2798663 complement(2124757..2125314) 1 NC_002973.6 identified by similarity to GP:19714972; match to protein family HMM PF03602; match to protein family HMM TIGR00095; methyltransferase 2125314 2798663 LMOf2365_2084 Listeria monocytogenes serotype 4b str. F2365 methyltransferase YP_014677.1 2124757 R 265669 CDS YP_014678.1 46908289 2798664 complement(2125411..2125692) 1 NC_002973.6 hypothetical protein 2125692 2798664 LMOf2365_2085 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014678.1 2125411 R 265669 CDS YP_014679.1 46908290 2799867 complement(2125723..2126172) 1 NC_002973.6 hypothetical protein 2126172 2799867 LMOf2365_2086 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014679.1 2125723 R 265669 CDS YP_014680.1 46908291 2799868 complement(2126220..2127263) 1 NC_002973.6 identified by match to protein family HMM PF00188; hypothetical protein 2127263 2799868 LMOf2365_2087 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014680.1 2126220 R 265669 CDS YP_014681.1 46908292 2798781 complement(2127423..2128328) 1 NC_002973.6 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 2128328 ctaB 2798781 ctaB Listeria monocytogenes serotype 4b str. F2365 protoheme IX farnesyltransferase YP_014681.1 2127423 R 265669 CDS YP_014682.1 46908293 2798800 2128564..2129481 1 NC_002973.6 identified by match to protein family HMM PF02628; cytochrome oxidase assembly protein 2129481 2798800 LMOf2365_2089 Listeria monocytogenes serotype 4b str. F2365 cytochrome oxidase assembly protein YP_014682.1 2128564 D 265669 CDS YP_014683.1 46908294 2799560 2129628..2130332 1 NC_002973.6 identified by match to protein family HMM PF00520; ion transport protein 2130332 2799560 LMOf2365_2090 Listeria monocytogenes serotype 4b str. F2365 ion transport protein YP_014683.1 2129628 D 265669 CDS YP_014684.1 46908295 2799294 complement(2130338..2130979) 1 NC_002973.6 identified by match to protein family HMM PF03473; MOSC domain-containing protein 2130979 2799294 LMOf2365_2091 Listeria monocytogenes serotype 4b str. F2365 MOSC domain-containing protein YP_014684.1 2130338 R 265669 CDS YP_014685.1 46908296 2799320 complement(2130998..2131615) 1 NC_002973.6 hypothetical protein 2131615 2799320 LMOf2365_2092 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014685.1 2130998 R 265669 CDS YP_014686.1 46908297 2799511 complement(2131628..2133253) 1 NC_002973.6 identified by similarity to SP:P12376; match to protein family HMM PF04234; match to protein family HMM PF05425; copper resistance domain-containing protein 2133253 2799511 LMOf2365_2093 Listeria monocytogenes serotype 4b str. F2365 copper resistance domain-containing protein YP_014686.1 2131628 R 265669 CDS YP_014687.1 46908298 2799512 2133393..2133584 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2156; hypothetical protein 2133584 2799512 LMOf2365_2094 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014687.1 2133393 D 265669 CDS YP_014688.1 46908299 2799542 2133646..2134032 1 NC_002973.6 homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 2134032 mscL 2799542 mscL Listeria monocytogenes serotype 4b str. F2365 large-conductance mechanosensitive channel YP_014688.1 2133646 D 265669 CDS YP_014689.1 46908300 2798437 complement(2134167..2134559) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2158; hypothetical protein 2134559 2798437 LMOf2365_2096 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014689.1 2134167 R 265669 CDS YP_014690.1 46908301 2798570 complement(2134604..2134813) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2159; hypothetical protein 2134813 2798570 LMOf2365_2097 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014690.1 2134604 R 265669 CDS YP_014691.1 46908302 2798482 complement(2134964..2135941) 1 NC_002973.6 identified by similarity to SP:Q06115; match to protein family HMM PF02275; choloylglycine hydrolase 2135941 cbH 2798482 cbH Listeria monocytogenes serotype 4b str. F2365 choloylglycine hydrolase YP_014691.1 2134964 R 265669 CDS YP_014692.1 46908303 2798180 complement(2136196..2137824) 1 NC_002973.6 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 2137824 groEL 2798180 groEL Listeria monocytogenes serotype 4b str. F2365 chaperonin GroEL YP_014692.1 2136196 R 265669 CDS YP_014693.1 46908304 2798416 complement(2137858..2138142) 1 NC_002973.6 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 2138142 groES 2798416 groES Listeria monocytogenes serotype 4b str. F2365 co-chaperonin GroES YP_014693.1 2137858 R 265669 CDS YP_014694.1 46908305 2798354 2138240..2138344 1 NC_002973.6 hypothetical protein 2138344 2798354 LMOf2365_2101 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014694.1 2138240 D 265669 CDS YP_014695.1 46908306 2798355 2138377..2139063 1 NC_002973.6 identified by match to protein family HMM PF02517; CAAX amino terminal protease 2139063 2798355 LMOf2365_2102 Listeria monocytogenes serotype 4b str. F2365 CAAX amino terminal protease YP_014695.1 2138377 D 265669 CDS YP_014696.1 46908307 2797492 2139065..2139262 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2163; hypothetical protein 2139262 2797492 LMOf2365_2103 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014696.1 2139065 D 265669 CDS YP_014697.1 46908308 2797743 complement(2139296..2139943) 1 NC_002973.6 modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex 2139943 2797743 LMOf2365_2104 Listeria monocytogenes serotype 4b str. F2365 redox-sensing transcriptional repressor Rex YP_014697.1 2139296 R 265669 CDS YP_014698.1 46908309 2797496 2140253..2142205 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2142205 2797496 LMOf2365_2105 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_014698.1 2140253 D 265669 CDS YP_014699.1 46908310 2797440 2142230..2143189 1 NC_002973.6 hypothetical protein 2143189 2797440 LMOf2365_2106 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014699.1 2142230 D 265669 CDS YP_014700.1 46908311 2797482 complement(2143734..2144756) 1 NC_002973.6 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 2144756 2797482 LMOf2365_2107 Listeria monocytogenes serotype 4b str. F2365 DNA-binding/iron metalloprotein/AP endonuclease YP_014700.1 2143734 R 265669 CDS YP_014701.1 46908312 2797483 complement(2144753..2145208) 1 NC_002973.6 identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575; ribosomal-protein-alanine acetyltransferase 2145208 rimI 2797483 rimI Listeria monocytogenes serotype 4b str. F2365 ribosomal-protein-alanine acetyltransferase YP_014701.1 2144753 R 265669 CDS YP_014702.1 46908313 2797466 complement(2145205..2145897) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2169; match to protein family HMM PF00814; hypothetical protein 2145897 2797466 LMOf2365_2109 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014702.1 2145205 R 265669 CDS YP_014703.1 46908314 2797220 complement(2145894..2146355) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2170; match to protein family HMM PF02367; match to protein family HMM TIGR00150; hypothetical protein 2146355 2797220 LMOf2365_2110 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014703.1 2145894 R 265669 CDS YP_014704.1 46908315 2797261 complement(2146460..2147602) 1 NC_002973.6 lipoprotein 2147602 2797261 LMOf2365_2111 Listeria monocytogenes serotype 4b str. F2365 lipoprotein YP_014704.1 2146460 R 265669 CDS YP_014705.1 46908316 2797249 complement(2147739..2148119) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2172; lipoprotein 2148119 2797249 LMOf2365_2112 Listeria monocytogenes serotype 4b str. F2365 lipoprotein YP_014705.1 2147739 R 265669 CDS YP_014706.1 46908317 2797178 complement(2148214..2148570) 1 NC_002973.6 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 2148570 2797178 LMOf2365_2113 Listeria monocytogenes serotype 4b str. F2365 camphor resistance protein CrcB YP_014706.1 2148214 R 265669 CDS YP_014707.1 46908318 2797179 complement(2148560..2148949) 1 NC_002973.6 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 2148949 2797179 LMOf2365_2114 Listeria monocytogenes serotype 4b str. F2365 camphor resistance protein CrcB YP_014707.1 2148560 R 265669 CDS YP_014708.1 46908319 2797199 complement(2149055..2149681) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2175; hypothetical protein 2149681 2797199 LMOf2365_2115 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014708.1 2149055 R 265669 CDS YP_014709.1 46908320 2797609 complement(2150838..2152526) 1 NC_002973.6 identified by match to protein family HMM PF00746; match to protein family HMM PF05738; match to protein family HMM TIGR01167; cell wall surface anchor family protein 2152526 2797609 LMOf2365_2117 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_014709.1 2150838 R 265669 CDS YP_014710.1 46908321 2797610 complement(2152623..2153894) 1 NC_002973.6 identified by match to protein family HMM PF01381; DNA-binding protein 2153894 2797610 LMOf2365_2118 Listeria monocytogenes serotype 4b str. F2365 DNA-binding protein YP_014710.1 2152623 R 265669 CDS YP_014711.1 46908322 2797572 complement(2154530..2155861) 1 NC_002973.6 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 2155861 2797572 LMOf2365_2119 Listeria monocytogenes serotype 4b str. F2365 MATE efflux family protein YP_014711.1 2154530 R 265669 CDS YP_014712.1 46908323 2797581 complement(2155871..2156461) 1 NC_002973.6 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2156461 2797581 LMOf2365_2120 Listeria monocytogenes serotype 4b str. F2365 TetR family transcriptional regulator YP_014712.1 2155871 R 265669 CDS YP_014713.1 46908324 2797585 complement(2156572..2157615) 1 NC_002973.6 identified by similarity to GP:2853612; lipase 2157615 2797585 LMOf2365_2121 Listeria monocytogenes serotype 4b str. F2365 lipase YP_014713.1 2156572 R 265669 CDS YP_014714.1 46908325 2797067 2157848..2159062 1 NC_002973.6 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 2159062 argG 2797067 argG Listeria monocytogenes serotype 4b str. F2365 argininosuccinate synthase YP_014714.1 2157848 D 265669 CDS YP_014715.1 46908326 2797120 2159066..2160436 1 NC_002973.6 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 2160436 argH 2797120 argH Listeria monocytogenes serotype 4b str. F2365 argininosuccinate lyase YP_014715.1 2159066 D 265669 CDS YP_014716.1 46908327 2797127 2160604..2162127 1 NC_002973.6 identified by similarity to SP:P54417; match to protein family HMM PF02028; match to protein family HMM TIGR00842; glycine betaine transporter 2162127 2797127 LMOf2365_2124 Listeria monocytogenes serotype 4b str. F2365 glycine betaine transporter YP_014716.1 2160604 D 265669 CDS YP_014717.1 46908328 2797128 complement(2162171..2162368) 1 NC_002973.6 hypothetical protein 2162368 2797128 LMOf2365_2125 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014717.1 2162171 R 265669 CDS YP_014718.1 46908329 2797135 complement(2162372..2163022) 1 NC_002973.6 identified by match to protein family HMM PF00596; hypothetical protein 2163022 2797135 LMOf2365_2126 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014718.1 2162372 R 265669 CDS YP_014719.1 46908330 2797140 complement(2163024..2163956) 1 NC_002973.6 identified by match to protein family HMM PF00294; carbohydrate kinase 2163956 2797140 LMOf2365_2127 Listeria monocytogenes serotype 4b str. F2365 carbohydrate kinase YP_014719.1 2163024 R 265669 CDS YP_014720.1 46908331 2797148 complement(2163974..2165323) 1 NC_002973.6 identified by similarity to SP:P37189; match to protein family HMM PF03611; PTS system galactitol-specific transporter subunit IIC 2165323 2797148 LMOf2365_2128 Listeria monocytogenes serotype 4b str. F2365 PTS system galactitol-specific transporter subunit IIC YP_014720.1 2163974 R 265669 CDS YP_014721.1 46908332 2797152 complement(2165351..2165626) 1 NC_002973.6 identified by similarity to SP:P37188; match to protein family HMM PF02302; PTS system galactitol-specific enzyme IIB component 2165626 2797152 LMOf2365_2129 Listeria monocytogenes serotype 4b str. F2365 PTS system galactitol-specific enzyme IIB component YP_014721.1 2165351 R 265669 CDS YP_014722.1 46908333 2797157 complement(2165632..2166099) 1 NC_002973.6 identified by similarity to SP:P37187; match to protein family HMM PF00359; PTS system galactitol-specific enzyme IIA component 2166099 2797157 LMOf2365_2130 Listeria monocytogenes serotype 4b str. F2365 PTS system galactitol-specific enzyme IIA component YP_014722.1 2165632 R 265669 CDS YP_014723.1 46908334 2797158 complement(2166107..2168113) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2189; match to protein family HMM PF00874; hypothetical protein 2168113 2797158 LMOf2365_2131 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014723.1 2166107 R 265669 CDS YP_014724.1 46908335 2797174 complement(2168294..2169739) 1 NC_002973.6 identified by match to protein family HMM PF00155; match to protein family HMM PF00392; GntR family transcriptional regulator 2169739 2797174 LMOf2365_2132 Listeria monocytogenes serotype 4b str. F2365 GntR family transcriptional regulator YP_014724.1 2168294 R 265669 CDS YP_014725.1 46908336 2797184 2169863..2170750 1 NC_002973.6 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS 2170750 2797184 LMOf2365_2133 Listeria monocytogenes serotype 4b str. F2365 pyridoxal biosynthesis lyase PdxS YP_014725.1 2169863 D 265669 CDS YP_014726.1 46908337 2797194 2170752..2171318 1 NC_002973.6 with PdxST is involved in the biosynthesis of pyridoxal 5'-phosphate; PdxT catalyzes the hydrolysis of glutamine to glutamate and ammonia; PdxS utilizes the ammonia to synthesize pyridoxal 5'-phosphate; glutamine amidotransferase subunit PdxT 2171318 2797194 LMOf2365_2134 Listeria monocytogenes serotype 4b str. F2365 glutamine amidotransferase subunit PdxT YP_014726.1 2170752 D 265669 CDS YP_014727.1 46908338 2797206 complement(2171357..2172334) 1 NC_002973.6 in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase 2172334 eutD 2797206 eutD Listeria monocytogenes serotype 4b str. F2365 phosphotransacetylase YP_014727.1 2171357 R 265669 CDS YP_014728.1 46908339 2797210 2172654..2172881 1 NC_002973.6 identified by similarity to GP:19917531; match to protein family HMM PF04023; ferrous iron transport protein A 2172881 2797210 LMOf2365_2136 Listeria monocytogenes serotype 4b str. F2365 ferrous iron transport protein A YP_014728.1 2172654 D 265669 CDS YP_014729.1 46908340 2797227 2172878..2174872 1 NC_002973.6 identified by match to protein family HMM PF02421; match to protein family HMM TIGR00231; match to protein family HMM TIGR00437; ferrous iron transport protein B 2174872 feoB 2797227 feoB Listeria monocytogenes serotype 4b str. F2365 ferrous iron transport protein B YP_014729.1 2172878 D 265669 CDS YP_014730.1 46908341 2797228 2174879..2175061 1 NC_002973.6 identified by similarity to GP:16414723; hypothetical protein 2175061 2797228 LMOf2365_2138 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014730.1 2174879 D 265669 CDS YP_014731.1 46908342 2797237 complement(2175091..2175945) 1 NC_002973.6 identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase 2175945 2797237 LMOf2365_2139 Listeria monocytogenes serotype 4b str. F2365 Ser/Thr protein phosphatase YP_014731.1 2175091 R 265669 CDS YP_014732.1 46908343 2797241 2176198..2176959 1 NC_002973.6 identified by match to protein family HMM PF00455; DeoR family transcriptional regulator 2176959 2797241 LMOf2365_2140 Listeria monocytogenes serotype 4b str. F2365 DeoR family transcriptional regulator YP_014732.1 2176198 D 265669 CDS YP_014733.1 46908344 2797246 2176965..2178098 1 NC_002973.6 identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221; N-acetylglucosamine-6-phosphate deacetylase 2178098 nagA-2 2797246 nagA-2 Listeria monocytogenes serotype 4b str. F2365 N-acetylglucosamine-6-phosphate deacetylase YP_014733.1 2176965 D 265669 CDS YP_014734.1 46908345 2797257 2178140..2178949 1 NC_002973.6 identified by match to protein family HMM PF00561; alpha/beta fold family hydrolase 2178949 2797257 LMOf2365_2142 Listeria monocytogenes serotype 4b str. F2365 alpha/beta fold family hydrolase YP_014734.1 2178140 D 265669 CDS YP_014735.1 46908346 2797433 complement(2179055..2180011) 1 NC_002973.6 identified by match to protein family HMM PF01238; match to protein family HMM TIGR00218; mannose-6-phosphate isomerase 2180011 manA 2797433 manA Listeria monocytogenes serotype 4b str. F2365 mannose-6-phosphate isomerase YP_014735.1 2179055 R 265669 CDS YP_014736.1 46908347 2797447 complement(2180091..2180822) 1 NC_002973.6 identified by similarity to OMNI:SP1710; match to protein family HMM PF00881; nitroreductase 2180822 2797447 LMOf2365_2144 Listeria monocytogenes serotype 4b str. F2365 nitroreductase YP_014736.1 2180091 R 265669 CDS YP_014737.1 46908348 2797448 2180945..2181175 1 NC_002973.6 identified by similarity to GP:16414730; DNA-binding protein 2181175 2797448 LMOf2365_2145 Listeria monocytogenes serotype 4b str. F2365 DNA-binding protein YP_014737.1 2180945 D 265669 CDS YP_014738.1 46908349 2797453 2181259..2182014 1 NC_002973.6 identified by similarity to SP:P39645; heme peroxidase 2182014 2797453 LMOf2365_2146 Listeria monocytogenes serotype 4b str. F2365 heme peroxidase YP_014738.1 2181259 D 265669 CDS YP_014739.1 46908350 2797459 2182210..2182977 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2182977 2797459 LMOf2365_2147 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_014739.1 2182210 D 265669 CDS YP_014740.1 46908351 2797475 2182964..2184904 1 NC_002973.6 identified by match to protein family HMM PF02687; ABC transporter permease 2184904 2797475 LMOf2365_2148 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_014740.1 2182964 D 265669 CDS YP_014741.1 46908352 2797490 complement(2184942..2185775) 1 NC_002973.6 identified by similarity to GP:16414734; hypothetical protein 2185775 2797490 LMOf2365_2149 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014741.1 2184942 R 265669 CDS YP_014742.1 46908353 2797504 2185827..2186288 1 NC_002973.6 identified by similarity to OMNI:EF0824; match to protein family HMM PF00583; acetyltransferase 2186288 2797504 LMOf2365_2150 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_014742.1 2185827 D 265669 CDS YP_014743.1 46908354 2797505 complement(2186323..2187675) 1 NC_002973.6 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 2187675 glmM 2797505 glmM Listeria monocytogenes serotype 4b str. F2365 phosphoglucosamine mutase YP_014743.1 2186323 R 265669 CDS YP_014744.1 46908355 2797513 complement(2187925..2189286) 1 NC_002973.6 hypothetical protein 2189286 2797513 LMOf2365_2152 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014744.1 2187925 R 265669 CDS YP_014745.1 46908356 2797517 complement(2189283..2190104) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2211; match to protein family HMM PF02457; match to protein family HMM TIGR00159; hypothetical protein 2190104 2797517 LMOf2365_2153 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014745.1 2189283 R 265669 CDS YP_014746.1 46908357 2797526 complement(2191682..2193943) 1 NC_002973.6 identified by match to protein family HMM PF03632; match to protein family HMM PF03633; match to protein family HMM PF03636; maltose phosphorylase 2193943 2797526 LMOf2365_2155 Listeria monocytogenes serotype 4b str. F2365 maltose phosphorylase YP_014746.1 2191682 R 265669 CDS YP_014747.1 46908358 2797530 complement(2193959..2194792) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2213; hypothetical protein 2194792 2797530 LMOf2365_2156 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014747.1 2193959 R 265669 CDS YP_014748.1 46908359 2797535 complement(2194820..2195671) 1 NC_002973.6 identified by similarity to SP:Q04699; match to protein family HMM PF00528; maltose/maltodextrin ABC transporter permease 2195671 2797535 LMOf2365_2157 Listeria monocytogenes serotype 4b str. F2365 maltose/maltodextrin ABC transporter permease YP_014748.1 2194820 R 265669 CDS YP_014749.1 46908360 2797539 complement(2195672..2196979) 1 NC_002973.6 identified by similarity to SP:Q04698; match to protein family HMM PF00528; match to protein family HMM PF05154; maltose/maltodextrin ABC transporter permease 2196979 2797539 LMOf2365_2158 Listeria monocytogenes serotype 4b str. F2365 maltose/maltodextrin ABC transporter permease YP_014749.1 2195672 R 265669 CDS YP_014750.1 46908361 2797549 complement(2197067..2198326) 1 NC_002973.6 identified by similarity to SP:P02928; match to protein family HMM PF01547; maltose/maltodextrin ABC transporter maltose/maltodextrin-binding protein 2198326 2797549 LMOf2365_2159 Listeria monocytogenes serotype 4b str. F2365 maltose/maltodextrin ABC transporter maltose/maltodextrin-binding protein YP_014750.1 2197067 R 265669 CDS YP_014751.1 46908362 2797550 complement(2198539..2200314) 1 NC_002973.6 identified by similarity to SP:P38940; match to protein family HMM PF00128; match to protein family HMM PF02903; neopullulanase 2200314 nplT 2797550 nplT Listeria monocytogenes serotype 4b str. F2365 neopullulanase YP_014751.1 2198539 R 265669 CDS YP_014752.1 46908363 2797557 2200572..2201207 1 NC_002973.6 identified by match to protein family HMM PF02517; CAAX amino terminal protease 2201207 2797557 LMOf2365_2161 Listeria monocytogenes serotype 4b str. F2365 CAAX amino terminal protease YP_014752.1 2200572 D 265669 CDS YP_014753.1 46908364 2798615 complement(2201243..2202208) 1 NC_002973.6 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 2202208 2798615 LMOf2365_2162 Listeria monocytogenes serotype 4b str. F2365 LacI family transcriptional regulator YP_014753.1 2201243 R 265669 CDS YP_014754.1 46908365 2797911 complement(2202347..2202583) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2220; hypothetical protein 2202583 2797911 LMOf2365_2163 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014754.1 2202347 R 265669 CDS YP_014755.1 46908366 2797561 complement(2203183..2205006) 1 NC_002973.6 hypothetical protein 2205006 2797561 LMOf2365_2164 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014755.1 2203183 R 265669 CDS YP_014756.1 46908367 2797944 complement(2206015..2206704) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2222; hypothetical protein 2206704 2797944 LMOf2365_2165 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014756.1 2206015 R 265669 CDS YP_014757.1 46908368 2797757 2207183..2207893 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2223; hypothetical protein 2207893 2797757 LMOf2365_2166 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014757.1 2207183 D 265669 CDS YP_014758.1 46908369 2797745 complement(2207923..2208822) 1 NC_002973.6 identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; hypothetical protein 2208822 2797745 LMOf2365_2167 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014758.1 2207923 R 265669 CDS YP_014759.1 46908370 2797851 complement(2208839..2209693) 1 NC_002973.6 identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; fructose-bisphosphate aldolase 2209693 2797851 LMOf2365_2168 Listeria monocytogenes serotype 4b str. F2365 fructose-bisphosphate aldolase YP_014759.1 2208839 R 265669 CDS YP_014760.1 46908371 2798154 complement(2211631..2213088) 1 NC_002973.6 identified by match to protein family HMM PF00874; match to protein family HMM TIGR01199; DNA-binding PRD domain-containing protein 2213088 2798154 LMOf2365_2170 Listeria monocytogenes serotype 4b str. F2365 DNA-binding PRD domain-containing protein YP_014760.1 2211631 R 265669 CDS YP_014761.1 46908372 2798155 2213284..2214186 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2214186 2798155 LMOf2365_2171 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_014761.1 2213284 D 265669 CDS YP_014762.1 46908373 2798174 2214179..2215414 1 NC_002973.6 ABC transporter permease 2215414 2798174 LMOf2365_2172 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_014762.1 2214179 D 265669 CDS YP_014763.1 46908374 2798213 2215431..2215904 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 2215904 2798213 LMOf2365_2173 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_014763.1 2215431 D 265669 CDS YP_014764.1 46908375 2798278 complement(2216494..2217159) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2233; hypothetical protein 2217159 2798278 LMOf2365_2174 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014764.1 2216494 R 265669 CDS YP_014765.1 46908376 2798260 2217400..2219115 1 NC_002973.6 mannose-6-phosphate isomerase 2219115 2798260 LMOf2365_2175 Listeria monocytogenes serotype 4b str. F2365 mannose-6-phosphate isomerase YP_014765.1 2217400 D 265669 CDS YP_014766.1 46908377 2798274 complement(2219154..2219888) 1 NC_002973.6 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 2219888 2798274 LMOf2365_2176 Listeria monocytogenes serotype 4b str. F2365 GntR family transcriptional regulator YP_014766.1 2219154 R 265669 CDS YP_014767.1 46908378 2799776 complement(2220003..2221019) 1 NC_002973.6 hypothetical protein 2221019 2799776 LMOf2365_2177 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014767.1 2220003 R 265669 CDS YP_014768.1 46908379 2799777 complement(2221088..2221942) 1 NC_002973.6 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 2221942 2799777 LMOf2365_2178 Listeria monocytogenes serotype 4b str. F2365 LysR family transcriptional regulator YP_014768.1 2221088 R 265669 CDS YP_014769.1 46908380 2798315 2222048..2223055 1 NC_002973.6 identified by match to protein family HMM PF03601; hypothetical protein 2223055 2798315 LMOf2365_2179 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014769.1 2222048 D 265669 CDS YP_014770.1 46908381 2798323 2223111..2223752 1 NC_002973.6 hypothetical protein 2223752 2798323 LMOf2365_2180 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014770.1 2223111 D 265669 CDS YP_014771.1 46908382 2798345 complement(2223802..2224119) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2238; match to protein family HMM PF03819; hypothetical protein 2224119 2798345 LMOf2365_2181 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014771.1 2223802 R 265669 CDS YP_014772.1 46908383 2798366 2224318..2224494 1 NC_002973.6 hypothetical protein 2224494 2798366 LMOf2365_2182 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014772.1 2224318 D 265669 CDS YP_014773.1 46908384 2798377 complement(2224537..2224836) 1 NC_002973.6 identified by similarity to OMNI:EF0964; match to protein family HMM PF03819; hypothetical protein 2224836 2798377 LMOf2365_2183 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014773.1 2224537 R 265669 CDS YP_014774.1 46908385 2798378 complement(2224943..2225269) 1 NC_002973.6 identified by similarity to SP:P80579; thioredoxin 2225269 2798378 LMOf2365_2184 Listeria monocytogenes serotype 4b str. F2365 thioredoxin YP_014774.1 2224943 R 265669 CDS YP_014775.1 46908386 2798387 complement(2225266..2225703) 1 NC_002973.6 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 2225703 2798387 LMOf2365_2185 Listeria monocytogenes serotype 4b str. F2365 flavodoxin YP_014775.1 2225266 R 265669 CDS YP_014776.1 46908387 2798397 complement(2225700..2226749) 1 NC_002973.6 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 2226749 nrdF 2798397 nrdF Listeria monocytogenes serotype 4b str. F2365 ribonucleotide-diphosphate reductase subunit beta YP_014776.1 2225700 R 265669 CDS YP_014777.1 46908388 2798407 complement(2226805..2229096) 1 NC_002973.6 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2229096 nrdA 2798407 nrdA Listeria monocytogenes serotype 4b str. F2365 ribonucleotide-diphosphate reductase subunit alpha YP_014777.1 2226805 R 265669 CDS YP_014778.1 46908389 2798426 2229632..2229973 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2695; match to protein family HMM TIGR01655; hypothetical protein 2229973 2798426 LMOf2365_2188 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014778.1 2229632 D 265669 CDS YP_014779.1 46908390 2798448 complement(2230027..2231928) 1 NC_002973.6 identified by match to protein family HMM PF00753; metallo-beta-lactamase 2231928 2798448 LMOf2365_2189 Listeria monocytogenes serotype 4b str. F2365 metallo-beta-lactamase YP_014779.1 2230027 R 265669 CDS YP_014780.1 46908391 2798458 complement(2232059..2232244) 1 NC_002973.6 identified by similarity to SP:P70964; match to protein family HMM PF05532; hypothetical protein 2232244 2798458 LMOf2365_2190 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014780.1 2232059 R 265669 CDS YP_014781.1 46908392 2798459 complement(2232338..2233387) 1 NC_002973.6 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; Gfo/Idh/MocA family oxidoreductase 2233387 2798459 LMOf2365_2191 Listeria monocytogenes serotype 4b str. F2365 Gfo/Idh/MocA family oxidoreductase YP_014781.1 2232338 R 265669 CDS YP_014782.1 46908393 2798472 complement(2233410..2234378) 1 NC_002973.6 identified by similarity to OMNI:NTL01LM2151; match to protein family HMM PF01261; hypothetical protein 2234378 2798472 LMOf2365_2192 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014782.1 2233410 R 265669 CDS YP_014783.1 46908394 2798493 complement(2234381..2235103) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2249; hypothetical protein 2235103 2798493 LMOf2365_2193 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014783.1 2234381 R 265669 CDS YP_014784.1 46908395 2798515 complement(2235105..2235845) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2250; hypothetical protein 2235845 2798515 LMOf2365_2194 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014784.1 2235105 R 265669 CDS YP_014785.1 46908396 2798528 complement(2235861..2236937) 1 NC_002973.6 identified by similarity to OMNI:SA0196; match to protein family HMM PF01408; match to protein family HMM PF02894; Gfo/Idh/MocA family oxidoreductase 2236937 2798528 LMOf2365_2195 Listeria monocytogenes serotype 4b str. F2365 Gfo/Idh/MocA family oxidoreductase YP_014785.1 2235861 R 265669 CDS YP_014786.1 46908397 2798537 complement(2237012..2237890) 1 NC_002973.6 identified by match to protein family HMM PF00165; match to protein family HMM PF02311; AraC family transcriptional regulator 2237890 2798537 LMOf2365_2196 Listeria monocytogenes serotype 4b str. F2365 AraC family transcriptional regulator YP_014786.1 2237012 R 265669 CDS YP_014787.1 46908398 2798538 complement(2237960..2238655) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2253; hypothetical protein 2238655 2798538 LMOf2365_2197 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014787.1 2237960 R 265669 CDS YP_014788.1 46908399 2798549 complement(2238908..2239579) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2254; match to protein family HMM PF00027; cyclic nucleotide-binding protein 2239579 2798549 LMOf2365_2198 Listeria monocytogenes serotype 4b str. F2365 cyclic nucleotide-binding protein YP_014788.1 2238908 R 265669 CDS YP_014789.1 46908400 2798559 complement(2239644..2240261) 1 NC_002973.6 identified by match to protein family HMM PF00753; metallo-beta-lactamase 2240261 2798559 LMOf2365_2199 Listeria monocytogenes serotype 4b str. F2365 metallo-beta-lactamase YP_014789.1 2239644 R 265669 CDS YP_014790.1 46908401 2798588 2240392..2240781 1 NC_002973.6 identified by similarity to SP:Q60003; match to protein family HMM PF00903; lactoylglutathione lyase 2240781 2798588 LMOf2365_2200 Listeria monocytogenes serotype 4b str. F2365 lactoylglutathione lyase YP_014790.1 2240392 D 265669 CDS YP_014791.1 46908402 2799483 2240804..2240962 1 NC_002973.6 hypothetical protein 2240962 2799483 LMOf2365_2201 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014791.1 2240804 D 265669 CDS YP_014792.1 46908403 2799554 complement(2241008..2241937) 1 NC_002973.6 identified by similarity to OMNI:SP0419; match to protein family HMM PF03060; enoyl-ACP reductase 2241937 2799554 LMOf2365_2202 Listeria monocytogenes serotype 4b str. F2365 enoyl-ACP reductase YP_014792.1 2241008 R 265669 CDS YP_014793.1 46908404 2799555 complement(2241959..2243182) 1 NC_002973.6 identified by similarity to GP:1235993; match to protein family HMM PF00083; major facilitator family transporter 2243182 2799555 LMOf2365_2203 Listeria monocytogenes serotype 4b str. F2365 major facilitator family transporter YP_014793.1 2241959 R 265669 CDS YP_014794.1 46908405 2799333 complement(2243179..2244762) 1 NC_002973.6 identified by similarity to GP:7242549; match to protein family HMM PF01144; propionate CoA-transferase 2244762 pct 2799333 pct Listeria monocytogenes serotype 4b str. F2365 propionate CoA-transferase YP_014794.1 2243179 R 265669 CDS YP_014795.1 46908406 2799307 complement(2244992..2246299) 1 NC_002973.6 identified by match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM TIGR01199; sigma-54 dependent transcriptional regulator 2246299 2799307 LMOf2365_2205 Listeria monocytogenes serotype 4b str. F2365 sigma-54 dependent transcriptional regulator YP_014795.1 2244992 R 265669 CDS YP_014796.1 46908407 2799283 complement(2246465..2247538) 1 NC_002973.6 identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 2247538 2799283 LMOf2365_2206 Listeria monocytogenes serotype 4b str. F2365 diguanylate cyclase YP_014796.1 2246465 R 265669 CDS YP_014797.1 46908408 2799282 complement(2247717..2248478) 1 NC_002973.6 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 2248478 fabG 2799282 fabG Listeria monocytogenes serotype 4b str. F2365 3-ketoacyl-ACP reductase YP_014797.1 2247717 R 265669 CDS YP_014798.1 46908409 2799255 2248662..2249225 1 NC_002973.6 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2249225 2799255 LMOf2365_2208 Listeria monocytogenes serotype 4b str. F2365 TetR family transcriptional regulator YP_014798.1 2248662 D 265669 CDS YP_014799.1 46908410 2799256 2249331..2249678 1 NC_002973.6 hypothetical protein 2249678 2799256 LMOf2365_2209 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014799.1 2249331 D 265669 CDS YP_014800.1 46908411 2799106 complement(2249718..2254307) 1 NC_002973.6 identified by match to protein family HMM PF00746; match to protein family HMM PF05737; match to protein family HMM PF05738; match to protein family HMM TIGR01167; match to protein family HMM TIGR01612; cell wall surface anchor family protein 2254307 2799106 LMOf2365_2210 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_014800.1 2249718 R 265669 CDS YP_014801.1 46908412 2799074 complement(2254576..2259669) 1 NC_002973.6 identified by match to protein family HMM PF00746; match to protein family HMM PF05737; match to protein family HMM PF05738; match to protein family HMM TIGR01167; match to protein family HMM TIGR01612; cell wall surface anchor family protein 2259669 2799074 LMOf2365_2211 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_014801.1 2254576 R 265669 CDS YP_014802.1 46908413 2799048 complement(2259889..2263344) 1 NC_002973.6 identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; match to protein family HMM TIGR01612; cell wall surface anchor family protein 2263344 2799048 LMOf2365_2212 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_014802.1 2259889 R 265669 CDS YP_014803.1 46908414 2799187 complement(2263537..2264013) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2269; match to protein family HMM PF05565; hypothetical protein 2264013 2799187 LMOf2365_2213 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014803.1 2263537 R 265669 CDS YP_014804.1 46908415 2799119 complement(2264074..2264814) 1 NC_002973.6 identified by similarity to GP:16411651; hypothetical protein 2264814 2799119 LMOf2365_2214 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014804.1 2264074 R 265669 CDS YP_014805.1 46908416 2799120 complement(2264818..2265597) 1 NC_002973.6 identified by similarity to SP:P23878; match to protein family HMM PF00005; iron compound ABC transporter ATP-binding protein 2265597 2799120 LMOf2365_2215 Listeria monocytogenes serotype 4b str. F2365 iron compound ABC transporter ATP-binding protein YP_014805.1 2264818 R 265669 CDS YP_014806.1 46908417 2798812 complement(2265578..2266567) 1 NC_002973.6 identified by similarity to SP:P49937; match to protein family HMM PF01032; iron compound ABC transporter permease 2266567 2798812 LMOf2365_2216 Listeria monocytogenes serotype 4b str. F2365 iron compound ABC transporter permease YP_014806.1 2265578 R 265669 CDS YP_014807.1 46908418 2798786 complement(2266557..2267429) 1 NC_002973.6 identified by similarity to SP:P40409; match to protein family HMM PF01497; iron compound ABC transporter substrate-binding protein 2267429 2798786 LMOf2365_2217 Listeria monocytogenes serotype 4b str. F2365 iron compound ABC transporter substrate-binding protein YP_014807.1 2266557 R 265669 CDS YP_014808.1 46908419 2798772 complement(2267516..2269225) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2274; match to protein family HMM PF05031; hypothetical protein 2269225 2798772 LMOf2365_2218 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014808.1 2267516 R 265669 CDS YP_014809.1 46908420 2798748 complement(2269238..2269864) 1 NC_002973.6 identified by similarity to GP:16414802; match to protein family HMM PF05031; hypothetical protein 2269864 2798748 LMOf2365_2219 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014809.1 2269238 R 265669 CDS YP_014810.1 46908421 2798735 complement(2270075..2270335) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2276; hypothetical protein 2270335 2798735 LMOf2365_2220 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014810.1 2270075 R 265669 CDS YP_014811.1 46908422 2798736 complement(2270634..2272439) 1 NC_002973.6 identified by similarity to SP:P54124; match to protein family HMM PF01432; match to protein family HMM TIGR00181; oligoendopeptidase F 2272439 pepF 2798736 pepF Listeria monocytogenes serotype 4b str. F2365 oligoendopeptidase F YP_014811.1 2270634 R 265669 CDS YP_014812.1 46908423 2798723 complement(2272512..2273597) 1 NC_002973.6 identified by similarity to GP:3211759; match to protein family HMM PF06054; CoiA-like family protein 2273597 2798723 LMOf2365_2222 Listeria monocytogenes serotype 4b str. F2365 CoiA-like family protein YP_014812.1 2272512 R 265669 CDS YP_014813.1 46908424 2798697 complement(2273753..2274406) 1 NC_002973.6 enables recognition and targeting of proteins for proteolysis, involved in negative regulation of competence; adaptor protein 2274406 2798697 LMOf2365_2223 Listeria monocytogenes serotype 4b str. F2365 adaptor protein YP_014813.1 2273753 R 265669 CDS YP_014814.1 46908425 2798675 complement(2274638..2275033) 1 NC_002973.6 the anti-alpha factor Spx interacts with RNA polymerase alpha subunit C-terminal domain in a region that interacts with the sigma 70 subunit and may interfere with activation of promoters; in Bacillus subtilis this protein is a substrate for ClpXP protease; blocks transcription of the competence regulatory gene encoded by the srf operon; regulates a number of genes involved in thiol homeostasis including trxA and trxB; monomeric member of ArsC family of proteins; does not bind DNA; contains a disulfide bond between C10 and C13 which may sense disulfide stress; Spx family transcriptional regulator 2275033 spxA 2798675 spxA Listeria monocytogenes serotype 4b str. F2365 Spx family transcriptional regulator YP_014814.1 2274638 R 265669 CDS YP_014815.1 46908426 2798652 complement(2275353..2276321) 1 NC_002973.6 identified by similarity to SP:P24137; match to protein family HMM PF00005; oligopeptide ABC transporter ATP-binding protein 2276321 2798652 LMOf2365_2225 Listeria monocytogenes serotype 4b str. F2365 oligopeptide ABC transporter ATP-binding protein YP_014815.1 2275353 R 265669 CDS YP_014816.1 46908427 2798637 complement(2276318..2277394) 1 NC_002973.6 identified by similarity to SP:P24136; match to protein family HMM PF00005; match to protein family HMM TIGR01727; oligopeptide ABC transporter ATP-binding protein 2277394 2798637 LMOf2365_2226 Listeria monocytogenes serotype 4b str. F2365 oligopeptide ABC transporter ATP-binding protein YP_014816.1 2276318 R 265669 CDS YP_014817.1 46908428 2798626 complement(2277412..2278446) 1 NC_002973.6 identified by similarity to SP:P24139; match to protein family HMM PF00528; oligopeptide ABC transporter permease 2278446 2798626 LMOf2365_2227 Listeria monocytogenes serotype 4b str. F2365 oligopeptide ABC transporter permease YP_014817.1 2277412 R 265669 CDS YP_014818.1 46908429 2798627 complement(2278446..2279375) 1 NC_002973.6 identified by similarity to SP:P24138; match to protein family HMM PF00528; oligopeptide ABC transporter permease 2279375 2798627 LMOf2365_2228 Listeria monocytogenes serotype 4b str. F2365 oligopeptide ABC transporter permease YP_014818.1 2278446 R 265669 CDS YP_014819.1 46908430 2798603 complement(2279654..2281330) 1 NC_002973.6 identified by match to protein family HMM PF00496; oligopeptide ABC transporter substrate-binding protein 2281330 2798603 LMOf2365_2229 Listeria monocytogenes serotype 4b str. F2365 oligopeptide ABC transporter substrate-binding protein YP_014819.1 2279654 R 265669 CDS YP_014820.1 46908431 2799584 2281954..2282298 1 NC_002973.6 hypothetical protein 2282298 2799584 LMOf2365_2230 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014820.1 2281954 D 265669 CDS YP_014821.1 46908432 2799514 2282633..2283628 1 NC_002973.6 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 2283628 trpS 2799514 trpS Listeria monocytogenes serotype 4b str. F2365 tryptophanyl-tRNA synthetase YP_014821.1 2282633 D 265669 CDS YP_014822.1 46908433 2799531 complement(2283684..2284100) 1 NC_002973.6 identified by match to protein family HMM PF02566; OsmC/Ohr family protein 2284100 2799531 LMOf2365_2232 Listeria monocytogenes serotype 4b str. F2365 OsmC/Ohr family protein YP_014822.1 2283684 R 265669 CDS YP_014823.1 46908434 2799394 complement(2284084..2284539) 1 NC_002973.6 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 2284539 2799394 LMOf2365_2233 Listeria monocytogenes serotype 4b str. F2365 MarR family transcriptional regulator YP_014823.1 2284084 R 265669 CDS YP_014824.1 46908435 2799395 complement(2284658..2285899) 1 NC_002973.6 identified by similarity to GP:6118425; match to protein family HMM PF00109; match to protein family HMM PF02801; 3-ketoacyl-ACP synthase 2285899 fabF 2799395 fabF Listeria monocytogenes serotype 4b str. F2365 3-ketoacyl-ACP synthase YP_014824.1 2284658 R 265669 CDS YP_014825.1 46908436 2798995 complement(2286102..2287040) 1 NC_002973.6 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 2287040 fabH 2798995 fabH Listeria monocytogenes serotype 4b str. F2365 3-oxoacyl-ACP synthase YP_014825.1 2286102 R 265669 CDS YP_014826.1 46908437 2797382 complement(2287160..2288263) 1 NC_002973.6 identified by match to protein family HMM PF01832; N-acetylmuramoyl-L-alanine amidase 2288263 2797382 LMOf2365_2236 Listeria monocytogenes serotype 4b str. F2365 N-acetylmuramoyl-L-alanine amidase YP_014826.1 2287160 R 265669 CDS YP_014827.1 46908438 2798977 2288610..2288798 1 NC_002973.6 hypothetical protein 2288798 2798977 LMOf2365_2237 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014827.1 2288610 D 265669 CDS YP_014828.1 46908439 2798936 complement(2288888..2289577) 1 NC_002973.6 identified by match to protein family HMM PF00300; match to protein family HMM TIGR01258; phosphoglycerate mutase 2289577 gpm 2798936 gpm Listeria monocytogenes serotype 4b str. F2365 phosphoglycerate mutase YP_014828.1 2288888 R 265669 CDS YP_014829.1 46908440 2798880 complement(2289668..2292268) 1 NC_002973.6 identified by similarity to SP:Q9RA63; match to protein family HMM PF00004; match to protein family HMM PF02861; clpB protein 2292268 2798880 LMOf2365_2239 Listeria monocytogenes serotype 4b str. F2365 clpB protein YP_014829.1 2289668 R 265669 CDS YP_014830.1 46908441 2798938 complement(2292416..2293093) 1 NC_002973.6 identified by match to protein family HMM PF01027; hypothetical protein 2293093 2798938 LMOf2365_2240 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014830.1 2292416 R 265669 CDS YP_014831.1 46908442 2799013 complement(2293205..2293975) 1 NC_002973.6 identified by match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD superfamily hydrolase 2293975 2799013 LMOf2365_2241 Listeria monocytogenes serotype 4b str. F2365 HAD superfamily hydrolase YP_014831.1 2293205 R 265669 CDS YP_014832.1 46908443 2799014 complement(2294039..2294824) 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 2294824 2799014 LMOf2365_2242 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_014832.1 2294039 R 265669 CDS YP_014833.1 46908444 2798079 complement(2294945..2295289) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2298; hypothetical protein 2295289 2798079 LMOf2365_2243 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014833.1 2294945 R 265669 CDS YP_014834.1 46908445 2799564 complement(2295446..2296375) 1 NC_002973.6 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 2296375 hemH 2799564 hemH Listeria monocytogenes serotype 4b str. F2365 ferrochelatase YP_014834.1 2295446 R 265669 CDS YP_014835.1 46908446 2799640 complement(2296372..2297433) 1 NC_002973.6 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 2297433 hemE 2799640 hemE Listeria monocytogenes serotype 4b str. F2365 uroporphyrinogen decarboxylase YP_014835.1 2296372 R 265669 CDS YP_014836.1 46908447 2799092 2297630..2298133 1 NC_002973.6 identified by similarity to SP:P38049; hypothetical protein 2298133 2799092 LMOf2365_2246 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014836.1 2297630 D 265669 CDS YP_014837.1 46908448 2798639 complement(2298172..2299389) 1 NC_002973.6 identified by similarity to SP:P55340; match to protein family HMM PF05975; ABC transporter permease 2299389 2798639 LMOf2365_2247 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_014837.1 2298172 R 265669 CDS YP_014838.1 46908449 2798640 complement(2299379..2300131) 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2300131 2798640 LMOf2365_2248 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_014838.1 2299379 R 265669 CDS YP_014839.1 46908450 2797553 2300292..2300714 1 NC_002973.6 identified by similarity to SP:O07513; match to protein family HMM PF01230; HIT family protein 2300714 2797553 LMOf2365_2249 Listeria monocytogenes serotype 4b str. F2365 HIT family protein YP_014839.1 2300292 D 265669 CDS YP_014840.1 46908451 2799671 2300744..2301106 1 NC_002973.6 identified by similarity to OMNI:NTL01BS01000; hypothetical protein 2301106 2799671 LMOf2365_2250 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014840.1 2300744 D 265669 CDS YP_014841.1 46908452 2799672 2301289..2301828 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2306; hypothetical protein 2301828 2799672 LMOf2365_2251 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014841.1 2301289 D 265669 CDS YP_014842.1 46908453 2799631 2301945..2302826 1 NC_002973.6 identified by similarity to SP:P24327; match to protein family HMM PF00639; protein export protein 2302826 prsA-2 2799631 prsA-2 Listeria monocytogenes serotype 4b str. F2365 protein export protein YP_014842.1 2301945 D 265669 CDS YP_014843.1 46908454 2799632 complement(2302867..2303808) 1 NC_002973.6 catalyzes the exonucleic cleavage of mRNA yielding nucleioside 5'-phosphates; 3'-5' exoribonuclease YhaM 2303808 2799632 LMOf2365_2253 Listeria monocytogenes serotype 4b str. F2365 3'-5' exoribonuclease YhaM YP_014843.1 2302867 R 265669 CDS YP_014844.1 46908455 2797159 complement(2303853..2306576) 1 NC_002973.6 hypothetical protein 2306576 2797159 LMOf2365_2254 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014844.1 2303853 R 265669 CDS YP_014845.1 46908456 2797486 complement(2306573..2307808) 1 NC_002973.6 identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase 2307808 2797486 LMOf2365_2255 Listeria monocytogenes serotype 4b str. F2365 Ser/Thr protein phosphatase YP_014845.1 2306573 R 265669 CDS YP_014846.1 46908457 2797487 complement(2307951..2308304) 1 NC_002973.6 identified by match to protein family HMM PF06133; hypothetical protein 2308304 2797487 LMOf2365_2256 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014846.1 2307951 R 265669 CDS YP_014847.1 46908458 2799833 complement(2308386..2309519) 1 NC_002973.6 identified by match to protein family HMM PF04286; hypothetical protein 2309519 2799833 LMOf2365_2257 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014847.1 2308386 R 265669 CDS YP_014848.1 46908459 2799834 complement(2309623..2310990) 1 NC_002973.6 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2310990 fumC 2799834 fumC Listeria monocytogenes serotype 4b str. F2365 fumarate hydratase YP_014848.1 2309623 R 265669 CDS YP_014849.1 46908460 2798320 complement(2311060..2311854) 1 NC_002973.6 hypothetical protein 2311854 2798320 LMOf2365_2259 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014849.1 2311060 R 265669 CDS YP_014850.1 46908461 2798518 complement(2311851..2312756) 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2312756 2798518 LMOf2365_2260 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_014850.1 2311851 R 265669 CDS YP_014851.1 46908462 2798519 complement(2312756..2312953) 1 NC_002973.6 hypothetical protein 2312953 2798519 LMOf2365_2261 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014851.1 2312756 R 265669 CDS YP_014852.1 46908463 2799229 complement(2313063..2315204) 1 NC_002973.6 identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074; penicillin-binding protein 2315204 2799229 LMOf2365_2262 Listeria monocytogenes serotype 4b str. F2365 penicillin-binding protein YP_014852.1 2313063 R 265669 CDS YP_014853.1 46908464 2799230 2315527..2315952 1 NC_002973.6 identified by similarity to SP:P45947; arsenate reductase 2315952 2799230 LMOf2365_2263 Listeria monocytogenes serotype 4b str. F2365 arsenate reductase YP_014853.1 2315527 D 265669 CDS YP_014854.1 46908465 2799217 2316016..2316885 1 NC_002973.6 identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 2316885 2799217 LMOf2365_2264 Listeria monocytogenes serotype 4b str. F2365 cation efflux family protein YP_014854.1 2316016 D 265669 CDS YP_014855.1 46908466 2799030 2317141..2318445 1 NC_002973.6 identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; hypothetical protein 2318445 2799030 LMOf2365_2265 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014855.1 2317141 D 265669 CDS YP_014856.1 46908467 2799031 complement(2318486..2319364) 1 NC_002973.6 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 2319364 2799031 LMOf2365_2266 Listeria monocytogenes serotype 4b str. F2365 LysR family transcriptional regulator YP_014856.1 2318486 R 265669 CDS YP_014857.1 46908468 2799489 2319665..2320519 1 NC_002973.6 identified by similarity to SP:P42419; IolI protein 2320519 2799489 LMOf2365_2267 Listeria monocytogenes serotype 4b str. F2365 IolI protein YP_014857.1 2319665 D 265669 CDS YP_014858.1 46908469 2799490 2320579..2322513 1 NC_002973.6 identified by similarity to SP:P32382; match to protein family HMM PF00070; match to protein family HMM PF00724; NADH oxidase 2322513 2799490 LMOf2365_2268 Listeria monocytogenes serotype 4b str. F2365 NADH oxidase YP_014858.1 2320579 D 265669 CDS YP_014859.1 46908470 2799558 2322572..2323441 1 NC_002973.6 catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 2323441 2799558 LMOf2365_2269 Listeria monocytogenes serotype 4b str. F2365 shikimate 5-dehydrogenase YP_014859.1 2322572 D 265669 CDS YP_014860.1 46908471 2797004 2323474..2324682 1 NC_002973.6 transporter 2324682 2797004 LMOf2365_2270 Listeria monocytogenes serotype 4b str. F2365 transporter YP_014860.1 2323474 D 265669 CDS YP_014861.1 46908472 2797005 2324842..2326032 1 NC_002973.6 identified by match to protein family HMM PF00083; major facilitator family transporter 2326032 2797005 LMOf2365_2271 Listeria monocytogenes serotype 4b str. F2365 major facilitator family transporter YP_014861.1 2324842 D 265669 CDS YP_014862.1 46908473 2797369 complement(2326071..2327135) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2325; hypothetical protein 2327135 2797369 LMOf2365_2272 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014862.1 2326071 R 265669 CDS YP_014863.1 46908474 2797370 complement(2327132..2328010) 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2328010 2797370 LMOf2365_2273 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_014863.1 2327132 R 265669 CDS YP_014864.1 46908475 2798088 complement(2328000..2328395) 1 NC_002973.6 identified by match to protein family HMM PF00392; GntR family transcriptional regulator 2328395 2798088 LMOf2365_2274 Listeria monocytogenes serotype 4b str. F2365 GntR family transcriptional regulator YP_014864.1 2328000 R 265669 CDS YP_014865.1 46908476 2799467 2329106..2329675 1 NC_002973.6 identified by similarity to SP:P19219; match to protein family HMM PF00165; match to protein family HMM PF02805; Ada regulatory protein 2329675 2799467 LMOf2365_2276 Listeria monocytogenes serotype 4b str. F2365 Ada regulatory protein YP_014865.1 2329106 D 265669 CDS YP_014866.1 46908477 2798949 2329697..2330566 1 NC_002973.6 identified by match to protein family HMM PF00849; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase D 2330566 2798949 LMOf2365_2277 Listeria monocytogenes serotype 4b str. F2365 ribosomal large subunit pseudouridine synthase D YP_014866.1 2329697 D 265669 CDS YP_014867.1 46908478 2798950 complement(2330579..2330971) 1 NC_002973.6 identified by match to protein family HMM PF00903; glyoxalase 2330971 2798950 LMOf2365_2278 Listeria monocytogenes serotype 4b str. F2365 glyoxalase YP_014867.1 2330579 R 265669 CDS YP_014868.1 46908479 2799176 complement(2330973..2331629) 1 NC_002973.6 hypothetical protein 2331629 2799176 LMOf2365_2279 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014868.1 2330973 R 265669 CDS YP_014869.1 46908480 2799177 complement(2331626..2332510) 1 NC_002973.6 identified by match to protein family HMM PF00248; aldo/keto reductase oxidoreductase 2332510 2799177 LMOf2365_2280 Listeria monocytogenes serotype 4b str. F2365 aldo/keto reductase oxidoreductase YP_014869.1 2331626 R 265669 CDS YP_014870.1 46908481 2797597 2332897..2333517 1 NC_002973.6 identified by match to protein family HMM PF01865; hypothetical protein 2333517 2797597 LMOf2365_2281 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014870.1 2332897 D 265669 CDS YP_014871.1 46908482 2799215 2333531..2334529 1 NC_002973.6 identified by match to protein family HMM PF01384; phosphate transporter family protein 2334529 2799215 LMOf2365_2282 Listeria monocytogenes serotype 4b str. F2365 phosphate transporter family protein YP_014871.1 2333531 D 265669 CDS YP_014872.1 46908483 2799216 2334721..2336181 1 NC_002973.6 identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726; His/Glu/Gln/Arg/opine ABC transporter permease 2336181 2799216 LMOf2365_2283 Listeria monocytogenes serotype 4b str. F2365 His/Glu/Gln/Arg/opine ABC transporter permease YP_014872.1 2334721 D 265669 CDS YP_014873.1 46908484 2799851 2336174..2336899 1 NC_002973.6 identified by similarity to SP:P27675; match to protein family HMM PF00005; amino acid ABC transporter ATP-binding protein 2336899 2799851 LMOf2365_2284 Listeria monocytogenes serotype 4b str. F2365 amino acid ABC transporter ATP-binding protein YP_014873.1 2336174 D 265669 CDS YP_014874.1 46908485 2797934 2336972..2338123 1 NC_002973.6 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 2338123 aspB 2797934 aspB Listeria monocytogenes serotype 4b str. F2365 aspartate aminotransferase YP_014874.1 2336972 D 265669 CDS YP_014875.1 46908486 2797918 complement(2338167..2338796) 1 NC_002973.6 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; HAD superfamily hydrolase 2338796 2797918 LMOf2365_2286 Listeria monocytogenes serotype 4b str. F2365 HAD superfamily hydrolase YP_014875.1 2338167 R 265669 CDS YP_014876.1 46908487 2797919 2338969..2340261 1 NC_002973.6 identified by match to protein family HMM PF00860; xanthine/uracil permease 2340261 2797919 LMOf2365_2287 Listeria monocytogenes serotype 4b str. F2365 xanthine/uracil permease YP_014876.1 2338969 D 265669 CDS YP_014877.1 46908488 2797400 2340374..2340640 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2341; hypothetical protein 2340640 2797400 LMOf2365_2288 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014877.1 2340374 D 265669 CDS YP_014878.1 46908489 2799629 complement(2340683..2341204) 1 NC_002973.6 identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382; PfpI family intracellular peptidase 2341204 2799629 LMOf2365_2289 Listeria monocytogenes serotype 4b str. F2365 PfpI family intracellular peptidase YP_014878.1 2340683 R 265669 CDS YP_014879.1 46908490 2799649 complement(2341368..2341712) 1 NC_002973.6 hypothetical protein 2341712 2799649 LMOf2365_2290 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014879.1 2341368 R 265669 CDS YP_014880.1 46908491 2799650 complement(2341709..2341900) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2343; ribulose-phosphate 3-epimerase 2341900 2799650 LMOf2365_2291 Listeria monocytogenes serotype 4b str. F2365 ribulose-phosphate 3-epimerase YP_014880.1 2341709 R 265669 CDS YP_014881.1 46908492 2799695 2342051..2342401 1 NC_002973.6 identified by similarity to SP:P46319; match to protein family HMM PF02255; PTS system beta-glucoside-specific transporter subunit IIA 2342401 2799695 LMOf2365_2292 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIA YP_014881.1 2342051 D 265669 CDS YP_014882.1 46908493 2797580 complement(2342392..2343267) 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 2343267 2797580 LMOf2365_2293 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_014882.1 2342392 R 265669 CDS YP_014883.1 46908494 2797605 complement(2343347..2343655) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2346; match to protein family HMM PF01883; hypothetical protein 2343655 2797605 LMOf2365_2294 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014883.1 2343347 R 265669 CDS YP_014884.1 46908495 2797606 complement(2343720..2344472) 1 NC_002973.6 hypothetical protein 2344472 2797606 LMOf2365_2295 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014884.1 2343720 R 265669 CDS YP_014885.1 46908496 2797608 2344624..2345436 1 NC_002973.6 identified by match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD family hydrolase 2345436 2797608 LMOf2365_2296 Listeria monocytogenes serotype 4b str. F2365 HAD family hydrolase YP_014885.1 2344624 D 265669 CDS YP_014886.1 46908497 2797613 complement(2345514..2346416) 1 NC_002973.6 identified by similarity to SP:P39803; match to protein family HMM PF02588; hypothetical protein 2346416 2797613 LMOf2365_2297 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014886.1 2345514 R 265669 CDS YP_014887.1 46908498 2797616 complement(2346500..2346862) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2350; hypothetical protein 2346862 2797616 LMOf2365_2298 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014887.1 2346500 R 265669 CDS YP_014888.1 46908499 2797617 complement(2346882..2347730) 1 NC_002973.6 identified by match to protein family HMM PF01557; fumarylacetoacetate hydrolase 2347730 2797617 LMOf2365_2299 Listeria monocytogenes serotype 4b str. F2365 fumarylacetoacetate hydrolase YP_014888.1 2346882 R 265669 CDS YP_014889.1 46908500 2797627 complement(2347731..2351438) 1 NC_002973.6 identified by similarity to SP:P23478; match to protein family HMM PF00580; match to protein family HMM TIGR01612; ATP-dependent nuclease subunit A 2351438 addA 2797627 addA Listeria monocytogenes serotype 4b str. F2365 ATP-dependent nuclease subunit A YP_014889.1 2347731 R 265669 CDS YP_014890.1 46908501 2797628 complement(2351440..2354913) 1 NC_002973.6 identified by similarity to SP:P23477; match to protein family HMM TIGR01612; ATP-dependent nuclease subunit B 2354913 addB 2797628 addB Listeria monocytogenes serotype 4b str. F2365 ATP-dependent nuclease subunit B YP_014890.1 2351440 R 265669 CDS YP_014891.1 46908502 2797632 complement(2355063..2355419) 1 NC_002973.6 YhzC protein 2355419 yhzC 2797632 yhzC Listeria monocytogenes serotype 4b str. F2365 YhzC protein YP_014891.1 2355063 R 265669 CDS YP_014892.1 46908503 2797071 2355550..2356158 1 NC_002973.6 identified by similarity to SP:P40396; transcriptional regulator 2356158 2797071 LMOf2365_2303 Listeria monocytogenes serotype 4b str. F2365 transcriptional regulator YP_014892.1 2355550 D 265669 CDS YP_014893.1 46908504 2797532 complement(2356213..2356569) 1 NC_002973.6 identified by match to protein family HMM PF01381; DNA-binding protein 2356569 2797532 LMOf2365_2304 Listeria monocytogenes serotype 4b str. F2365 DNA-binding protein YP_014893.1 2356213 R 265669 CDS YP_014894.1 46908505 2797533 complement(2356666..2358564) 1 NC_002973.6 identified by similarity to SP:P23355; match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427; PTS system fructose-specific transporter subunit IIABC 2358564 2797533 LMOf2365_2305 Listeria monocytogenes serotype 4b str. F2365 PTS system fructose-specific transporter subunit IIABC YP_014894.1 2356666 R 265669 CDS YP_014895.1 46908506 2797536 complement(2358566..2359489) 1 NC_002973.6 identified by similarity to SP:O31714; match to protein family HMM PF00294; 1-phosphofructokinase 2359489 fruB 2797536 fruB Listeria monocytogenes serotype 4b str. F2365 1-phosphofructokinase YP_014895.1 2358566 R 265669 CDS YP_014896.1 46908507 2797544 complement(2359486..2360238) 1 NC_002973.6 identified by match to protein family HMM PF00455; DeoR family transcriptional regulator 2360238 2797544 LMOf2365_2307 Listeria monocytogenes serotype 4b str. F2365 DeoR family transcriptional regulator YP_014896.1 2359486 R 265669 CDS YP_014897.1 46908508 2799716 2360456..2361781 1 NC_002973.6 identified by similarity to SP:Q56115; match to protein family HMM PF03051; aminopeptidase C 2361781 2799716 LMOf2365_2308 Listeria monocytogenes serotype 4b str. F2365 aminopeptidase C YP_014897.1 2360456 D 265669 CDS YP_014898.1 46908509 2799717 complement(2361778..2362221) 1 NC_002973.6 identified by match to protein family HMM PF04463; hypothetical protein 2362221 2799717 LMOf2365_2309 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014898.1 2361778 R 265669 CDS YP_014899.1 46908510 2799741 complement(2362302..2363213) 1 NC_002973.6 identified by match to protein family HMM PF04227; indigoidine synthase A-like protein 2363213 2799741 LMOf2365_2310 Listeria monocytogenes serotype 4b str. F2365 indigoidine synthase A-like protein YP_014899.1 2362302 R 265669 CDS YP_014900.1 46908511 2797932 complement(2363210..2364328) 1 NC_002973.6 identified by match to protein family HMM PF00294; carbohydrate kinase 2364328 2797932 LMOf2365_2311 Listeria monocytogenes serotype 4b str. F2365 carbohydrate kinase YP_014900.1 2363210 R 265669 CDS YP_014901.1 46908512 2797933 complement(2364461..2365162) 1 NC_002973.6 identified by similarity to SP:P33918; match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; ribosomal small subunit pseudouridine synthase A 2365162 rsuA 2797933 rsuA Listeria monocytogenes serotype 4b str. F2365 ribosomal small subunit pseudouridine synthase A YP_014901.1 2364461 R 265669 CDS YP_014902.1 46908513 2797939 complement(2365236..2366558) 1 NC_002973.6 identified by similarity to SP:P54950; NtaA/SnaA/SoxA family monooxygenase 2366558 2797939 LMOf2365_2313 Listeria monocytogenes serotype 4b str. F2365 NtaA/SnaA/SoxA family monooxygenase YP_014902.1 2365236 R 265669 CDS YP_014903.1 46908514 2797946 complement(2366555..2366821) 1 NC_002973.6 identified by similarity to SP:P37687; glutaredoxin family protein 2366821 2797946 LMOf2365_2314 Listeria monocytogenes serotype 4b str. F2365 glutaredoxin family protein YP_014903.1 2366555 R 265669 CDS YP_014904.1 46908515 2797769 complement(2366814..2367809) 1 NC_002973.6 identified by match to protein family HMM PF00296; luciferase 2367809 2797769 LMOf2365_2315 Listeria monocytogenes serotype 4b str. F2365 luciferase YP_014904.1 2366814 R 265669 CDS YP_014905.1 46908516 2797770 complement(2367806..2368585) 1 NC_002973.6 identified by similarity to SP:O34900; match to protein family HMM PF00005; amino acid ABC transporter ATP-binding protein 2368585 2797770 LMOf2365_2316 Listeria monocytogenes serotype 4b str. F2365 amino acid ABC transporter ATP-binding protein YP_014905.1 2367806 R 265669 CDS YP_014906.1 46908517 2799763 complement(2368582..2369289) 1 NC_002973.6 identified by similarity to SP:P54953; match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter permease 2369289 2799763 LMOf2365_2317 Listeria monocytogenes serotype 4b str. F2365 amino acid ABC transporter permease YP_014906.1 2368582 R 265669 CDS YP_014907.1 46908518 2799836 complement(2369303..2370019) 1 NC_002973.6 identified by similarity to SP:P76315; match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter permease 2370019 2799836 LMOf2365_2318 Listeria monocytogenes serotype 4b str. F2365 amino acid ABC transporter permease YP_014907.1 2369303 R 265669 CDS YP_014908.1 46908519 2799840 complement(2370041..2370850) 1 NC_002973.6 identified by match to protein family HMM PF00497; amino acid ABC transporter substrate-binding protein 2370850 2799840 LMOf2365_2319 Listeria monocytogenes serotype 4b str. F2365 amino acid ABC transporter substrate-binding protein YP_014908.1 2370041 R 265669 CDS YP_014909.1 46908520 2799841 complement(2370867..2371403) 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 2371403 2799841 LMOf2365_2320 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_014909.1 2370867 R 265669 CDS YP_014910.1 46908521 2798613 complement(2371419..2371964) 1 NC_002973.6 identified by similarity to SP:P80644; match to protein family HMM PF03358; FMN reductase, NADPH-dependent 2371964 2798613 LMOf2365_2321 Listeria monocytogenes serotype 4b str. F2365 FMN reductase, NADPH-dependent YP_014910.1 2371419 R 265669 CDS YP_014911.1 46908522 2799233 2372207..2373106 1 NC_002973.6 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 2373106 2799233 LMOf2365_2322 Listeria monocytogenes serotype 4b str. F2365 LysR family transcriptional regulator YP_014911.1 2372207 D 265669 CDS YP_014912.1 46908523 2799221 complement(2373132..2375084) 1 NC_002973.6 identified by match to protein family HMM PF00999; sodium/hydrogen exchanger family protein 2375084 2799221 LMOf2365_2323 Listeria monocytogenes serotype 4b str. F2365 sodium/hydrogen exchanger family protein YP_014912.1 2373132 R 265669 CDS YP_014913.1 46908524 2799222 complement(2375208..2376806) 1 NC_002973.6 identified by similarity to OMNI:NTL01BS02949; hypothetical protein 2376806 2799222 LMOf2365_2324 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014913.1 2375208 R 265669 CDS YP_014914.1 46908525 2797018 complement(2376810..2378051) 1 NC_002973.6 identified by similarity to SP:P21191; transporter 2378051 2797018 LMOf2365_2325 Listeria monocytogenes serotype 4b str. F2365 transporter YP_014914.1 2376810 R 265669 CDS YP_014915.1 46908526 2799501 complement(2378252..2378863) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2433; hypothetical protein 2378863 2799501 LMOf2365_2326 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014915.1 2378252 R 265669 CDS YP_014916.1 46908527 2798096 complement(2379053..2379583) 1 NC_002973.6 hypothetical protein 2379583 2798096 LMOf2365_2327 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014916.1 2379053 R 265669 CDS YP_014917.1 46908528 2798097 complement(2379599..2380330) 1 NC_002973.6 identified by similarity to SP:O35000; match to protein family HMM PF01182; glucosamine-6-phosphate isomerase 2380330 2798097 LMOf2365_2328 Listeria monocytogenes serotype 4b str. F2365 glucosamine-6-phosphate isomerase YP_014917.1 2379599 R 265669 CDS YP_014918.1 46908529 2799438 complement(2380374..2381219) 1 NC_002973.6 identified by match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; cof family hydrolase 2381219 2799438 LMOf2365_2329 Listeria monocytogenes serotype 4b str. F2365 cof family hydrolase YP_014918.1 2380374 R 265669 CDS YP_014919.1 46908530 2798057 complement(2381339..2384122) 1 NC_002973.6 hypothetical protein 2384122 2798057 LMOf2365_2330 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014919.1 2381339 R 265669 CDS YP_014920.1 46908531 2799003 complement(2384156..2384626) 1 NC_002973.6 identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; Rrf2 family protein 2384626 2799003 LMOf2365_2331 Listeria monocytogenes serotype 4b str. F2365 Rrf2 family protein YP_014920.1 2384156 R 265669 CDS YP_014921.1 46908532 2799004 2384738..2384854 1 NC_002973.6 hypothetical protein 2384854 2799004 LMOf2365_2332 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014921.1 2384738 D 265669 CDS YP_014922.1 46908533 2798239 2385019..2386542 1 NC_002973.6 identified by match to protein family HMM PF00324; match to protein family HMM TIGR00910; amino acid antiporter 2386542 2798239 LMOf2365_2333 Listeria monocytogenes serotype 4b str. F2365 amino acid antiporter YP_014922.1 2385019 D 265669 CDS YP_014923.1 46908534 2798935 2386555..2387949 1 NC_002973.6 identified by similarity to SP:Q928R9; match to protein family HMM PF00282; match to protein family HMM TIGR01788; glutamate decarboxylase 2387949 gadB 2798935 gadB Listeria monocytogenes serotype 4b str. F2365 glutamate decarboxylase YP_014923.1 2386555 D 265669 CDS YP_014924.1 46908535 2799625 complement(2387958..2389472) 1 NC_002973.6 identified by similarity to GP:460083; match to protein family HMM PF07003; RofA family transcriptional regulator 2389472 2799625 LMOf2365_2335 Listeria monocytogenes serotype 4b str. F2365 RofA family transcriptional regulator YP_014924.1 2387958 R 265669 CDS YP_014925.1 46908536 2798044 complement(2396512..2396604) 1 NC_002973.6 hypothetical protein 2396604 2798044 LMOf2365_2336 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014925.1 2396512 R 265669 CDS YP_014926.1 46908537 2798045 complement(2396689..2397447) 1 NC_002973.6 identified by match to protein family HMM PF00455; DeoR family transcriptional regulator 2397447 2798045 LMOf2365_2337 Listeria monocytogenes serotype 4b str. F2365 DeoR family transcriptional regulator YP_014926.1 2396689 R 265669 CDS YP_014927.1 46908538 2798093 complement(2397552..2398904) 1 NC_002973.6 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 2398904 pgi 2798093 pgi Listeria monocytogenes serotype 4b str. F2365 glucose-6-phosphate isomerase YP_014927.1 2397552 R 265669 CDS YP_014928.1 46908539 2798878 complement(2399006..2399413) 1 NC_002973.6 identified by match to protein family HMM PF00293; MutT/nudix family protein 2399413 2798878 LMOf2365_2339 Listeria monocytogenes serotype 4b str. F2365 MutT/nudix family protein YP_014928.1 2399006 R 265669 CDS YP_014929.1 46908540 2799400 complement(2399561..2399914) 1 NC_002973.6 induced by heat shock, salt stress, oxidative stress, glucose limitation and oxygen limitation; general stress protein 13 2399914 2799400 LMOf2365_2340 Listeria monocytogenes serotype 4b str. F2365 general stress protein 13 YP_014929.1 2399561 R 265669 CDS YP_014930.1 46908541 2799401 2400068..2401234 1 NC_002973.6 identified by match to protein family HMM PF00155; class I aminotransferase 2401234 2799401 LMOf2365_2341 Listeria monocytogenes serotype 4b str. F2365 class I aminotransferase YP_014930.1 2400068 D 265669 CDS YP_014931.1 46908542 2799418 2401373..2402476 1 NC_002973.6 identified by match to protein family HMM PF02687; ABC transporter permease 2402476 2799418 LMOf2365_2342 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_014931.1 2401373 D 265669 CDS YP_014932.1 46908543 2798098 2402476..2403156 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2403156 2798098 LMOf2365_2343 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_014932.1 2402476 D 265669 CDS YP_014933.1 46908544 2798099 complement(2403140..2403514) 1 NC_002973.6 identified by similarity to SP:Q45399; match to protein family HMM PF02302; PTS system cellobiose-specific transporter subunit IIB 2403514 2798099 LMOf2365_2344 Listeria monocytogenes serotype 4b str. F2365 PTS system cellobiose-specific transporter subunit IIB YP_014933.1 2403140 R 265669 CDS YP_014934.1 46908545 2797371 2403759..2405120 1 NC_002973.6 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive; aspartate kinase 2405120 2797371 LMOf2365_2345 Listeria monocytogenes serotype 4b str. F2365 aspartate kinase YP_014934.1 2403759 D 265669 CDS YP_014935.1 46908546 2799912 complement(2405165..2405557) 1 NC_002973.6 identified by similarity to GP:16414996; hypothetical protein 2405557 2799912 LMOf2365_2346 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014935.1 2405165 R 265669 CDS YP_014936.1 46908547 2799758 complement(2405671..2407041) 1 NC_002973.6 identified by similarity to GP:13936341; hypothetical protein 2407041 2799758 LMOf2365_2347 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014936.1 2405671 R 265669 CDS YP_014937.1 46908548 2799759 2407223..2407501 1 NC_002973.6 hypothetical protein 2407501 2799759 LMOf2365_2348 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014937.1 2407223 D 265669 CDS YP_014938.1 46908549 2799724 complement(2407526..2408110) 1 NC_002973.6 identified by match to protein family HMM PF00160; cyclophilin type peptidyl-prolyl cis-trans isomerase 2408110 2799724 LMOf2365_2349 Listeria monocytogenes serotype 4b str. F2365 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_014938.1 2407526 R 265669 CDS YP_014939.1 46908550 2797163 2408342..2409553 1 NC_002973.6 identified by similarity to SP:P25744; match to protein family HMM PF00083; major facilitator family transporter 2409553 2797163 LMOf2365_2350 Listeria monocytogenes serotype 4b str. F2365 major facilitator family transporter YP_014939.1 2408342 D 265669 CDS YP_014940.1 46908551 2797164 2409898..2412306 1 NC_002973.6 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit A 2412306 2797164 LMOf2365_2351 Listeria monocytogenes serotype 4b str. F2365 monovalent cation/H+ antiporter subunit A YP_014940.1 2409898 D 265669 CDS YP_014941.1 46908552 2797081 2412293..2412715 1 NC_002973.6 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in the case of S. meliloti it was proved to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit B 2412715 2797081 LMOf2365_2352 Listeria monocytogenes serotype 4b str. F2365 monovalent cation/H+ antiporter subunit B YP_014941.1 2412293 D 265669 CDS YP_014942.1 46908553 2799635 2412715..2413062 1 NC_002973.6 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C 2413062 2799635 LMOf2365_2353 Listeria monocytogenes serotype 4b str. F2365 monovalent cation/H+ antiporter subunit C YP_014942.1 2412715 D 265669 CDS YP_014943.1 46908554 2799644 2413052..2414539 1 NC_002973.6 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D 2414539 2799644 LMOf2365_2354 Listeria monocytogenes serotype 4b str. F2365 monovalent cation/H+ antiporter subunit D YP_014943.1 2413052 D 265669 CDS YP_014944.1 46908555 2799645 2414546..2415025 1 NC_002973.6 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit E 2415025 2799645 LMOf2365_2355 Listeria monocytogenes serotype 4b str. F2365 monovalent cation/H+ antiporter subunit E YP_014944.1 2414546 D 265669 CDS YP_014945.1 46908556 2799662 2415022..2415309 1 NC_002973.6 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit F 2415309 2799662 LMOf2365_2356 Listeria monocytogenes serotype 4b str. F2365 monovalent cation/H+ antiporter subunit F YP_014945.1 2415022 D 265669 CDS YP_014946.1 46908557 2799660 2415293..2415886 1 NC_002973.6 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit G 2415886 2799660 LMOf2365_2357 Listeria monocytogenes serotype 4b str. F2365 monovalent cation/H+ antiporter subunit G YP_014946.1 2415293 D 265669 CDS YP_014947.1 46908558 2799661 complement(2415931..2416302) 1 NC_002973.6 identified by similarity to GP:18266385; match to protein family HMM PF03061; match to protein family HMM TIGR00369; thioesterase 2416302 2799661 LMOf2365_2358 Listeria monocytogenes serotype 4b str. F2365 thioesterase YP_014947.1 2415931 R 265669 CDS YP_014948.1 46908559 2797602 2416430..2416903 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2468; match to protein family HMM PF02681; hypothetical protein 2416903 2797602 LMOf2365_2359 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014948.1 2416430 D 265669 CDS YP_014949.1 46908560 2797039 2417015..2418235 1 NC_002973.6 identified by similarity to OMNI:EF3007; hypothetical protein 2418235 2797039 LMOf2365_2360 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014949.1 2417015 D 265669 CDS YP_014950.1 46908561 2797113 complement(2418262..2418867) 1 NC_002973.6 hypothetical protein 2418867 2797113 LMOf2365_2361 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014950.1 2418262 R 265669 CDS YP_014951.1 46908562 2797114 complement(2419029..2419847) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2469; hypothetical protein 2419847 2797114 LMOf2365_2362 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014951.1 2419029 R 265669 CDS YP_014952.1 46908563 2797116 complement(2419932..2421143) 1 NC_002973.6 identified by match to protein family HMM PF00070; pyridine nucleotide-disulfide oxidoreductase 2421143 2797116 LMOf2365_2363 Listeria monocytogenes serotype 4b str. F2365 pyridine nucleotide-disulfide oxidoreductase YP_014952.1 2419932 R 265669 CDS YP_014953.1 46908564 2797165 2421593..2422588 1 NC_002973.6 identified by match to protein family HMM PF00070; pyridine nucleotide-disulfide oxidoreductase 2422588 2797165 LMOf2365_2364 Listeria monocytogenes serotype 4b str. F2365 pyridine nucleotide-disulfide oxidoreductase YP_014953.1 2421593 D 265669 CDS YP_014954.1 46908565 2797166 2422676..2423305 1 NC_002973.6 identified by similarity to OMNI:NTL01BH1523; hypothetical protein 2423305 2797166 LMOf2365_2365 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014954.1 2422676 D 265669 CDS YP_014955.1 46908566 2797171 complement(2423351..2423584) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2474; hypothetical protein 2423584 2797171 LMOf2365_2366 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014955.1 2423351 R 265669 CDS YP_014956.1 46908567 2797182 complement(2423606..2423932) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2475; hypothetical protein 2423932 2797182 LMOf2365_2367 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014956.1 2423606 R 265669 CDS YP_014957.1 46908568 2797509 complement(2424173..2424370) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2476; hypothetical protein 2424370 2797509 LMOf2365_2368 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014957.1 2424173 R 265669 CDS YP_014958.1 46908569 2797510 complement(2424411..2424530) 1 NC_002973.6 hypothetical protein 2424530 2797510 LMOf2365_2369 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014958.1 2424411 R 265669 CDS YP_014959.1 46908570 2797948 2424856..2427243 1 NC_002973.6 identified by match to protein family HMM PF00560; match to protein family HMM TIGR01167; cell wall surface anchor family protein 2427243 2797948 LMOf2365_2370 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_014959.1 2424856 D 265669 CDS YP_014960.1 46908571 2797752 2427416..2427652 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2479; match to protein family HMM PF01106; NifU family protein 2427652 2797752 LMOf2365_2371 Listeria monocytogenes serotype 4b str. F2365 NifU family protein YP_014960.1 2427416 D 265669 CDS YP_014961.1 46908572 2797753 2427765..2428265 1 NC_002973.6 identified by similarity to SP:O32124; hypothetical protein 2428265 2797753 LMOf2365_2372 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014961.1 2427765 D 265669 CDS YP_014962.1 46908573 2797758 complement(2428290..2429600) 1 NC_002973.6 identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; hypothetical protein 2429600 2797758 LMOf2365_2373 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014962.1 2428290 R 265669 CDS YP_014963.1 46908574 2797664 complement(2429636..2430079) 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 2430079 2797664 LMOf2365_2374 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_014963.1 2429636 R 265669 CDS YP_014964.1 46908575 2798169 complement(2430128..2430895) 1 NC_002973.6 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01457; match to protein family HMM TIGR01460; HAD family hydrolase 2430895 2798169 LMOf2365_2375 Listeria monocytogenes serotype 4b str. F2365 HAD family hydrolase YP_014964.1 2430128 R 265669 CDS YP_014965.1 46908576 2798170 complement(2430915..2431190) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2484; match to protein family HMM PF06265; hypothetical protein 2431190 2798170 LMOf2365_2376 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014965.1 2430915 R 265669 CDS YP_014966.1 46908577 2799783 complement(2431187..2432575) 1 NC_002973.6 identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase 2432575 2799783 LMOf2365_2377 Listeria monocytogenes serotype 4b str. F2365 Ser/Thr protein phosphatase YP_014966.1 2431187 R 265669 CDS YP_014967.1 46908578 2799791 2432702..2433550 1 NC_002973.6 identified by match to protein family HMM PF01925; hypothetical protein 2433550 2799791 LMOf2365_2378 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014967.1 2432702 D 265669 CDS YP_014968.1 46908579 2799792 2433551..2433916 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2487; hypothetical protein 2433916 2799792 LMOf2365_2379 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014968.1 2433551 D 265669 CDS YP_014969.1 46908580 2799806 complement(2433949..2434791) 1 NC_002973.6 identified by similarity to GP:16415027; match to protein family HMM PF01904; hypothetical protein 2434791 2799806 LMOf2365_2380 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014969.1 2433949 R 265669 CDS YP_014970.1 46908581 2798618 complement(2434933..2435247) 1 NC_002973.6 identified by similarity to GP:12141272; hypothetical protein 2435247 2798618 LMOf2365_2381 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014970.1 2434933 R 265669 CDS YP_014971.1 46908582 2798709 complement(2435382..2436776) 1 NC_002973.6 identified by similarity to OMNI:NTL01BH3471; match to protein family HMM PF01458; match to protein family HMM TIGR01980; FeS assembly protein SufB 2436776 sufB 2798709 sufB Listeria monocytogenes serotype 4b str. F2365 FeS assembly protein SufB YP_014971.1 2435382 R 265669 CDS YP_014972.1 46908583 2798710 complement(2436799..2437242) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2490; match to protein family HMM PF01592; NifU family protein 2437242 2798710 LMOf2365_2383 Listeria monocytogenes serotype 4b str. F2365 NifU family protein YP_014972.1 2436799 R 265669 CDS YP_014973.1 46908584 2798721 complement(2437239..2438465) 1 NC_002973.6 identified by similarity to SP:Q9K7A0; match to protein family HMM PF00266; match to protein family HMM TIGR01979; SufD subfamily cysteine desulfurase 2438465 2798721 LMOf2365_2384 Listeria monocytogenes serotype 4b str. F2365 SufD subfamily cysteine desulfurase YP_014973.1 2437239 R 265669 CDS YP_014974.1 46908585 2798744 complement(2438466..2439755) 1 NC_002973.6 identified by similarity to GP:19747525; match to protein family HMM PF01458; match to protein family HMM TIGR01981; FeS assembly protein SufD 2439755 sufD 2798744 sufD Listeria monocytogenes serotype 4b str. F2365 FeS assembly protein SufD YP_014974.1 2438466 R 265669 CDS YP_014975.1 46908586 2799856 complement(2439786..2440571) 1 NC_002973.6 identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978; SUF system FeS assembly ATPase 2440571 sufC 2799856 sufC Listeria monocytogenes serotype 4b str. F2365 SUF system FeS assembly ATPase YP_014975.1 2439786 R 265669 CDS YP_014976.1 46908587 2799141 2440911..2441987 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2494; lipoprotein 2441987 2799141 LMOf2365_2387 Listeria monocytogenes serotype 4b str. F2365 lipoprotein YP_014976.1 2440911 D 265669 CDS YP_014977.1 46908588 2799142 complement(2442029..2442859) 1 NC_002973.6 identified by match to protein family HMM PF03180; ABC transporter substrate-binding protein 2442859 2799142 LMOf2365_2388 Listeria monocytogenes serotype 4b str. F2365 ABC transporter substrate-binding protein YP_014977.1 2442029 R 265669 CDS YP_014978.1 46908589 2799066 complement(2442924..2443598) 1 NC_002973.6 identified by match to protein family HMM PF00528; ABC transporter permease 2443598 2799066 LMOf2365_2389 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_014978.1 2442924 R 265669 CDS YP_014979.1 46908590 2799290 complement(2443595..2444617) 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2444617 2799290 LMOf2365_2390 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_014979.1 2443595 R 265669 CDS YP_014980.1 46908591 2799291 complement(2444934..2445122) 1 NC_002973.6 hypothetical protein 2445122 2799291 LMOf2365_2391 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014980.1 2444934 R 265669 CDS YP_014981.1 46908592 2799303 complement(2445201..2446343) 1 NC_002973.6 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 2446343 2799303 LMOf2365_2392 Listeria monocytogenes serotype 4b str. F2365 sensor histidine kinase YP_014981.1 2445201 R 265669 CDS YP_014982.1 46908593 2799535 complement(2446333..2447028) 1 NC_002973.6 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 2447028 2799535 LMOf2365_2393 Listeria monocytogenes serotype 4b str. F2365 DNA-binding response regulator YP_014982.1 2446333 R 265669 CDS YP_014983.1 46908594 2799539 complement(2447103..2447978) 1 NC_002973.6 identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 2447978 2799539 LMOf2365_2394 Listeria monocytogenes serotype 4b str. F2365 cation efflux family protein YP_014983.1 2447103 R 265669 CDS YP_014984.1 46908595 2799540 complement(2448170..2448454) 1 NC_002973.6 identified by similarity to SP:P06544; thioredoxin 2448454 2799540 LMOf2365_2395 Listeria monocytogenes serotype 4b str. F2365 thioredoxin YP_014984.1 2448170 R 265669 CDS YP_014985.1 46908596 2799475 complement(2448539..2448916) 1 NC_002973.6 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 2448916 gcvH 2799475 gcvH Listeria monocytogenes serotype 4b str. F2365 glycine cleavage system protein H YP_014985.1 2448539 R 265669 CDS YP_014986.1 46908597 2799481 complement(2448957..2449310) 1 NC_002973.6 identified by match to protein family HMM PF03960; match to protein family HMM TIGR01617; ArsC family protein 2449310 2799481 LMOf2365_2397 Listeria monocytogenes serotype 4b str. F2365 ArsC family protein YP_014986.1 2448957 R 265669 CDS YP_014987.1 46908598 2797031 complement(2449467..2450642) 1 NC_002973.6 identified by match to protein family HMM PF01098; cell cycle protein FtsW 2450642 2797031 LMOf2365_2398 Listeria monocytogenes serotype 4b str. F2365 cell cycle protein FtsW YP_014987.1 2449467 R 265669 CDS YP_014988.1 46908599 2797032 complement(2450718..2451887) 1 NC_002973.6 identified by match to protein family HMM PF01098; cell cycle protein FtsW 2451887 2797032 LMOf2365_2399 Listeria monocytogenes serotype 4b str. F2365 cell cycle protein FtsW YP_014988.1 2450718 R 265669 CDS YP_014989.1 46908600 2799482 complement(2452029..2452820) 1 NC_002973.6 identified by similarity to SP:P49938; match to protein family HMM PF00005; iron compound ABC transporter ATP-binding protein 2452820 2799482 LMOf2365_2400 Listeria monocytogenes serotype 4b str. F2365 iron compound ABC transporter ATP-binding protein YP_014989.1 2452029 R 265669 CDS YP_014990.1 46908601 2798107 complement(2452817..2453827) 1 NC_002973.6 identified by similarity to GP:5006425; match to protein family HMM PF01032; iron compound ABC transporter permease 2453827 2798107 LMOf2365_2401 Listeria monocytogenes serotype 4b str. F2365 iron compound ABC transporter permease YP_014990.1 2452817 R 265669 CDS YP_014991.1 46908602 2798108 complement(2453827..2454798) 1 NC_002973.6 identified by similarity to SP:P37580; match to protein family HMM PF01497; iron compound ABC transporter substrate-binding protein 2454798 2798108 LMOf2365_2402 Listeria monocytogenes serotype 4b str. F2365 iron compound ABC transporter substrate-binding protein YP_014991.1 2453827 R 265669 CDS YP_014992.1 46908603 2798993 2454954..2455118 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2509; hypothetical protein 2455118 2798993 LMOf2365_2403 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014992.1 2454954 D 265669 CDS YP_014993.1 46908604 2798964 2455251..2456009 1 NC_002973.6 identified by similarity to GP:15963430; match to protein family HMM PF00756; tributyrin esterase 2456009 estA 2798964 estA Listeria monocytogenes serotype 4b str. F2365 tributyrin esterase YP_014993.1 2455251 D 265669 CDS YP_014994.1 46908605 2798953 complement(2456049..2457452) 1 NC_002973.6 identified by similarity to SP:Q8Y4K4; match to protein family HMM PF00282; match to protein family HMM TIGR01788; glutamate decarboxylase 2457452 gadG 2798953 gadG Listeria monocytogenes serotype 4b str. F2365 glutamate decarboxylase YP_014994.1 2456049 R 265669 CDS YP_014995.1 46908606 2798966 2457579..2457887 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2512; hypothetical protein 2457887 2798966 LMOf2365_2406 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014995.1 2457579 D 265669 CDS YP_014996.1 46908607 2798967 complement(2457949..2458803) 1 NC_002973.6 identified by similarity to SP:P39805; match to protein family HMM PF00874; match to protein family HMM PF03123; transcription antiterminator LicT 2458803 licT 2798967 licT Listeria monocytogenes serotype 4b str. F2365 transcription antiterminator LicT YP_014996.1 2457949 R 265669 CDS YP_014997.1 46908608 2798064 2458915..2459064 1 NC_002973.6 hypothetical protein 2459064 2798064 LMOf2365_2408 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014997.1 2458915 D 265669 CDS YP_014998.1 46908609 2797456 2459071..2459481 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2514; hypothetical protein 2459481 2797456 LMOf2365_2409 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014998.1 2459071 D 265669 CDS YP_014999.1 46908610 2799657 complement(2459504..2460016) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2515; hypothetical protein 2460016 2799657 LMOf2365_2410 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_014999.1 2459504 R 265669 CDS YP_015000.1 46908611 2799658 2460140..2460481 1 NC_002973.6 identified by similarity to GP:16415055; match to protein family HMM TIGR01655; hypothetical protein 2460481 2799658 LMOf2365_2411 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015000.1 2460140 D 265669 CDS YP_015001.1 46908612 2799670 complement(2460513..2460896) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2517; hypothetical protein 2460896 2799670 LMOf2365_2412 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015001.1 2460513 R 265669 CDS YP_015002.1 46908613 2799692 complement(2460952..2461848) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2518; hypothetical protein 2461848 2799692 LMOf2365_2413 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015002.1 2460952 R 265669 CDS YP_015003.1 46908614 2799693 complement(2461893..2462462) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2519; hypothetical protein 2462462 2799693 LMOf2365_2414 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015003.1 2461893 R 265669 CDS YP_015004.1 46908615 2797124 complement(2462638..2463057) 1 NC_002973.6 hypothetical protein 2463057 2797124 LMOf2365_2415 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015004.1 2462638 R 265669 CDS YP_015005.1 46908616 2798236 complement(2463980..2465041) 1 NC_002973.6 identified by match to protein family HMM PF00560; hypothetical protein 2465041 2798236 LMOf2365_2416 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015005.1 2463980 R 265669 CDS YP_015006.1 46908617 2798179 complement(2465092..2469024) 1 NC_002973.6 identified by match to protein family HMM PF01055; match to protein family HMM PF03422; match to protein family HMM TIGR01612; glycosyl hydrolase 2469024 2798179 LMOf2365_2417 Listeria monocytogenes serotype 4b str. F2365 glycosyl hydrolase YP_015006.1 2465092 R 265669 CDS YP_015007.1 46908618 2799780 complement(2469039..2469983) 1 NC_002973.6 identified by match to protein family HMM PF00560; hypothetical protein 2469983 2799780 LMOf2365_2418 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015007.1 2469039 R 265669 CDS YP_015008.1 46908619 2799781 complement(2470044..2473319) 1 NC_002973.6 identified by match to protein family HMM PF01055; match to protein family HMM PF03422; match to protein family HMM TIGR01612; glycosyl hydrolase 2473319 2799781 LMOf2365_2419 Listeria monocytogenes serotype 4b str. F2365 glycosyl hydrolase YP_015008.1 2470044 R 265669 CDS YP_015009.1 46908620 2799821 2473702..2474610 1 NC_002973.6 identified by match to protein family HMM PF01381; match to protein family HMM TIGR01716; transcriptional activator 2474610 2799821 LMOf2365_2420 Listeria monocytogenes serotype 4b str. F2365 transcriptional activator YP_015009.1 2473702 D 265669 CDS YP_015010.1 46908621 2798824 complement(2474666..2475130) 1 NC_002973.6 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2475130 smpB 2798824 smpB Listeria monocytogenes serotype 4b str. F2365 SsrA-binding protein YP_015010.1 2474666 R 265669 CDS YP_015011.1 46908622 2798655 complement(2475146..2477497) 1 NC_002973.6 identified by similarity to SP:P21499; match to protein family HMM PF00575; match to protein family HMM PF00773; match to protein family HMM TIGR00358; match to protein family HMM TIGR02063; ribonuclease R 2477497 2798655 LMOf2365_2422 Listeria monocytogenes serotype 4b str. F2365 ribonuclease R YP_015011.1 2475146 R 265669 CDS YP_015012.1 46908623 2798656 complement(2477561..2478307) 1 NC_002973.6 identified by similarity to SP:Q06174; carboxylesterase 2478307 est-1 2798656 est-1 Listeria monocytogenes serotype 4b str. F2365 carboxylesterase YP_015012.1 2477561 R 265669 CDS YP_015013.1 46908624 2798353 complement(2478605..2478838) 1 NC_002973.6 identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase subunit SecG 2478838 secG 2798353 secG Listeria monocytogenes serotype 4b str. F2365 preprotein translocase subunit SecG YP_015013.1 2478605 R 265669 CDS YP_015014.1 46908625 2798533 complement(2478928..2479671) 1 NC_002973.6 identified by similarity to SP:Q06174; carboxylesterase 2479671 est-2 2798533 est-2 Listeria monocytogenes serotype 4b str. F2365 carboxylesterase YP_015014.1 2478928 R 265669 CDS YP_015015.1 46908626 2799862 complement(2479854..2480573) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2530; hypothetical protein 2480573 2799862 LMOf2365_2426 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015015.1 2479854 R 265669 CDS YP_015016.1 46908627 2799552 complement(2480706..2480873) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2531; hypothetical protein 2480873 2799552 LMOf2365_2427 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015016.1 2480706 R 265669 CDS YP_015017.1 46908628 2799553 complement(2480982..2482274) 1 NC_002973.6 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 2482274 eno 2799553 eno Listeria monocytogenes serotype 4b str. F2365 phosphopyruvate hydratase YP_015017.1 2480982 R 265669 CDS YP_015018.1 46908629 2799521 complement(2482410..2483942) 1 NC_002973.6 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 2483942 gpmA 2799521 gpmA Listeria monocytogenes serotype 4b str. F2365 phosphoglyceromutase YP_015018.1 2482410 R 265669 CDS YP_015019.1 46908630 2799556 complement(2483944..2484699) 1 NC_002973.6 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 2484699 tpiA 2799556 tpiA Listeria monocytogenes serotype 4b str. F2365 triosephosphate isomerase YP_015019.1 2483944 R 265669 CDS YP_015020.1 46908631 2798090 complement(2484745..2485935) 1 NC_002973.6 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 2485935 pgk 2798090 pgk Listeria monocytogenes serotype 4b str. F2365 phosphoglycerate kinase YP_015020.1 2484745 R 265669 CDS YP_015021.1 46908632 2798062 complement(2486070..2487080) 1 NC_002973.6 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase 2487080 gap 2798062 gap Listeria monocytogenes serotype 4b str. F2365 glyceraldehyde-3-phosphate dehydrogenase YP_015021.1 2486070 R 265669 CDS YP_015022.1 46908633 2798149 complement(2487113..2488159) 1 NC_002973.6 identified by match to protein family HMM PF04198; transcriptional regulator 2488159 2798149 LMOf2365_2433 Listeria monocytogenes serotype 4b str. F2365 transcriptional regulator YP_015022.1 2487113 R 265669 CDS YP_015023.1 46908634 2798150 complement(2488600..2489943) 1 NC_002973.6 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 2489943 2798150 LMOf2365_2434 Listeria monocytogenes serotype 4b str. F2365 RNA polymerase factor sigma-54 YP_015023.1 2488600 R 265669 CDS YP_015024.1 46908635 2798101 complement(2490103..2491029) 1 NC_002973.6 identified by match to protein family HMM PF01244; dipeptidase 2491029 2798101 LMOf2365_2435 Listeria monocytogenes serotype 4b str. F2365 dipeptidase YP_015024.1 2490103 R 265669 CDS YP_015025.1 46908636 2798038 complement(2493351..2493959) 1 NC_002973.6 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2493959 2798038 LMOf2365_2437 Listeria monocytogenes serotype 4b str. F2365 TetR family transcriptional regulator YP_015025.1 2493351 R 265669 CDS YP_015026.1 46908637 2797062 complement(2493976..2494476) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2542; hypothetical protein 2494476 2797062 LMOf2365_2438 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015026.1 2493976 R 265669 CDS YP_015027.1 46908638 2799517 2494607..2494942 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2543; hypothetical protein 2494942 2799517 LMOf2365_2439 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015027.1 2494607 D 265669 CDS YP_015028.1 46908639 2799900 complement(2495190..2496626) 1 NC_002973.6 identified by similarity to GP:3308998; match to protein family HMM PF00041; match to protein family HMM PF02839; match to protein family HMM PF03067; chitin-binding protein/carbohydrate-binding protein 2496626 2799900 LMOf2365_2440 Listeria monocytogenes serotype 4b str. F2365 chitin-binding protein/carbohydrate-binding protein YP_015028.1 2495190 R 265669 CDS YP_015029.1 46908640 2799536 2496783..2497379 1 NC_002973.6 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 2497379 clpP 2799536 clpP Listeria monocytogenes serotype 4b str. F2365 ATP-dependent Clp protease proteolytic subunit YP_015029.1 2496783 D 265669 CDS YP_015030.1 46908641 2799491 complement(2497428..2498819) 1 NC_002973.6 identified by match to protein family HMM PF00324; amino acid permease 2498819 2799491 LMOf2365_2442 Listeria monocytogenes serotype 4b str. F2365 amino acid permease YP_015030.1 2497428 R 265669 CDS YP_015031.1 46908642 2799492 2499036..2500202 1 NC_002973.6 identified by match to protein family HMM PF00560; hypothetical protein 2500202 2799492 LMOf2365_2443 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015031.1 2499036 D 265669 CDS YP_015032.1 46908643 2799887 complement(2500255..2501271) 1 NC_002973.6 catalyzes the reduction of alpha, beta-unsaturated aldehydes and ketones; reduces the nitro group nitroester and nitroaromatic compounds; NADPH dehydrogenase NamA 2501271 2799887 LMOf2365_2444 Listeria monocytogenes serotype 4b str. F2365 NADPH dehydrogenase NamA YP_015032.1 2500255 R 265669 CDS YP_015033.1 46908644 2799124 complement(2501298..2502269) 1 NC_002973.6 identified by similarity to OMNI:NTL01BS03470; match to protein family HMM PF02650; match to protein family HMM TIGR00647; hypothetical protein 2502269 2799124 LMOf2365_2445 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015033.1 2501298 R 265669 CDS YP_015034.1 46908645 2799889 complement(2502277..2503245) 1 NC_002973.6 identified by similarity to SP:Q928C0; match to protein family HMM PF01933; match to protein family HMM TIGR01826; hypothetical protein 2503245 2799889 LMOf2365_2446 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015034.1 2502277 R 265669 CDS YP_015035.1 46908646 2799890 complement(2503247..2504122) 1 NC_002973.6 identified by match to protein family HMM PF03668; hypothetical protein 2504122 2799890 LMOf2365_2447 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015035.1 2503247 R 265669 CDS YP_015036.1 46908647 2797675 complement(2504230..2505960) 1 NC_002973.6 identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01369; phosphoglucomutase/phosphomannomutase 2505960 2797675 LMOf2365_2448 Listeria monocytogenes serotype 4b str. F2365 phosphoglucomutase/phosphomannomutase YP_015036.1 2504230 R 265669 CDS YP_015037.1 46908648 2798727 complement(2506002..2507045) 1 NC_002973.6 identified by similarity to SP:P05149; match to protein family HMM PF01263; aldose 1-epimerase 2507045 mro 2798727 mro Listeria monocytogenes serotype 4b str. F2365 aldose 1-epimerase YP_015037.1 2506002 R 265669 CDS YP_015038.1 46908649 2798673 complement(2507080..2508063) 1 NC_002973.6 identified by match to protein family HMM PF01370; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase 2508063 galE 2798673 galE Listeria monocytogenes serotype 4b str. F2365 UDP-glucose 4-epimerase YP_015038.1 2507080 R 265669 CDS YP_015039.1 46908650 2798674 complement(2508183..2509142) 1 NC_002973.6 identified by match to protein family HMM PF00070; match to protein family HMM TIGR01292; thioredoxin-disulfide reductase 2509142 trxB 2798674 trxB Listeria monocytogenes serotype 4b str. F2365 thioredoxin-disulfide reductase YP_015039.1 2508183 R 265669 CDS YP_015040.1 46908651 2797191 complement(2509221..2510696) 1 NC_002973.6 identified by match to protein family HMM PF00515; hypothetical protein 2510696 2797191 LMOf2365_2452 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015040.1 2509221 R 265669 CDS YP_015041.1 46908652 2797531 complement(2510781..2511278) 1 NC_002973.6 identified by match to protein family HMM PF00132; hexapeptide transferase 2511278 2797531 LMOf2365_2453 Listeria monocytogenes serotype 4b str. F2365 hexapeptide transferase YP_015041.1 2510781 R 265669 CDS YP_015042.1 46908653 2797484 complement(2511282..2511935) 1 NC_002973.6 hydrolyzes pyrophosphate formed during serine-46-phosphorylated HPr dephosphorylation; pyrophosphatase PpaX 2511935 2797484 LMOf2365_2454 Listeria monocytogenes serotype 4b str. F2365 pyrophosphatase PpaX YP_015042.1 2511282 R 265669 CDS YP_015043.1 46908654 2797485 complement(2511979..2512812) 1 NC_002973.6 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 2512812 lgt 2797485 lgt Listeria monocytogenes serotype 4b str. F2365 prolipoprotein diacylglyceryl transferase YP_015043.1 2511979 R 265669 CDS YP_015044.1 46908655 2797170 complement(2512898..2513836) 1 NC_002973.6 catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase 2513836 hprK 2797170 hprK Listeria monocytogenes serotype 4b str. F2365 HPr kinase/phosphorylase YP_015044.1 2512898 R 265669 CDS YP_015045.1 46908656 2797121 complement(2514023..2514376) 1 NC_002973.6 identified by match to protein family HMM PF04020; hypothetical protein 2514376 2797121 LMOf2365_2457 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015045.1 2514023 R 265669 CDS YP_015046.1 46908657 2799688 complement(2514385..2514585) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2612; match to protein family HMM PF04024; PspC domain-containing protein, truncated 2514585 2799688 LMOf2365_2458 Listeria monocytogenes serotype 4b str. F2365 PspC domain-containing protein, truncated YP_015046.1 2514385 R 265669 CDS YP_015047.1 46908658 2797091 complement(2514609..2515820) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2612; match to protein family HMM PF04024; PspC domain-containing protein 2515820 2797091 LMOf2365_2459 Listeria monocytogenes serotype 4b str. F2365 PspC domain-containing protein YP_015047.1 2514609 R 265669 CDS YP_015048.1 46908659 2797092 complement(2515887..2517149) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2613; hypothetical protein 2517149 2797092 LMOf2365_2460 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015048.1 2515887 R 265669 CDS YP_015049.1 46908660 2799667 complement(2517358..2520228) 1 NC_002973.6 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 2520228 uvrA 2799667 uvrA Listeria monocytogenes serotype 4b str. F2365 excinuclease ABC subunit A YP_015049.1 2517358 R 265669 CDS YP_015050.1 46908661 2797088 complement(2520236..2522212) 1 NC_002973.6 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 2522212 uvrB 2797088 uvrB Listeria monocytogenes serotype 4b str. F2365 excinuclease ABC subunit B YP_015050.1 2520236 R 265669 CDS YP_015051.1 46908662 2799637 complement(2522463..2522702) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2616; hypothetical protein 2522702 2799637 LMOf2365_2463 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015051.1 2522463 R 265669 CDS YP_015052.1 46908663 2799638 complement(2522723..2523370) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2617; HD domain-containing protein 2523370 2799638 LMOf2365_2464 Listeria monocytogenes serotype 4b str. F2365 HD domain-containing protein YP_015052.1 2522723 R 265669 CDS YP_015053.1 46908664 2797279 complement(2523392..2523778) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2618; hypothetical protein 2523778 2797279 LMOf2365_2465 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015053.1 2523392 R 265669 CDS YP_015054.1 46908665 2797273 complement(2523884..2524189) 1 NC_002973.6 identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 2524189 2797273 LMOf2365_2466 Listeria monocytogenes serotype 4b str. F2365 ArsR family transcriptional regulator YP_015054.1 2523884 R 265669 CDS YP_015055.1 46908666 2797065 complement(2524457..2525116) 1 NC_002973.6 identified by similarity to SP:Q9X4T4; match to protein family HMM PF01895; phosphate transport system protein PhoU 2525116 2797065 LMOf2365_2467 Listeria monocytogenes serotype 4b str. F2365 phosphate transport system protein PhoU YP_015055.1 2524457 R 265669 CDS YP_015056.1 46908667 2797066 complement(2525129..2525908) 1 NC_002973.6 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 2525908 2797066 LMOf2365_2468 Listeria monocytogenes serotype 4b str. F2365 phosphate ABC transporter ATP-binding protein YP_015056.1 2525129 R 265669 CDS YP_015057.1 46908668 2797070 complement(2525923..2526738) 1 NC_002973.6 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 2526738 2797070 LMOf2365_2469 Listeria monocytogenes serotype 4b str. F2365 phosphate ABC transporter ATP-binding protein YP_015057.1 2525923 R 265669 CDS YP_015058.1 46908669 2797075 complement(2526766..2527650) 1 NC_002973.6 identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter permease 2527650 2797075 LMOf2365_2470 Listeria monocytogenes serotype 4b str. F2365 phosphate ABC transporter permease YP_015058.1 2526766 R 265669 CDS YP_015059.1 46908670 2797076 complement(2527647..2528597) 1 NC_002973.6 identified by similarity to SP:Q58420; match to protein family HMM PF00528; match to protein family HMM TIGR02138; phosphate ABC transporter permease 2528597 2797076 LMOf2365_2471 Listeria monocytogenes serotype 4b str. F2365 phosphate ABC transporter permease YP_015059.1 2527647 R 265669 CDS YP_015060.1 46908671 2797082 complement(2528664..2529572) 1 NC_002973.6 identified by match to protein family HMM PF01547; phosphate ABC transporter substrate-binding protein 2529572 2797082 LMOf2365_2472 Listeria monocytogenes serotype 4b str. F2365 phosphate ABC transporter substrate-binding protein YP_015060.1 2528664 R 265669 CDS YP_015061.1 46908672 2797096 complement(2529828..2531603) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2626; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM TIGR00229; histidine kinase 2531603 2797096 LMOf2365_2473 Listeria monocytogenes serotype 4b str. F2365 histidine kinase YP_015061.1 2529828 R 265669 CDS YP_015062.1 46908673 2797100 complement(2531603..2532325) 1 NC_002973.6 identified by similarity to SP:P13792; match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator PhoP 2532325 phoP 2797100 phoP Listeria monocytogenes serotype 4b str. F2365 DNA-binding response regulator PhoP YP_015062.1 2531603 R 265669 CDS YP_015063.1 46908674 2797101 complement(2532464..2533639) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2628; hypothetical protein 2533639 2797101 LMOf2365_2475 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015063.1 2532464 R 265669 CDS YP_015064.1 46908675 2798747 complement(2533667..2535115) 1 NC_002973.6 identified by similarity to SP:O66043; match to protein family HMM PF00614; cardiolipin synthetase 2535115 cls-2 2798747 cls-2 Listeria monocytogenes serotype 4b str. F2365 cardiolipin synthetase YP_015064.1 2533667 R 265669 CDS YP_015065.1 46908676 2797106 complement(2535239..2536549) 1 NC_002973.6 identified by match to protein family HMM PF01551; M48 family peptidase 2536549 2797106 LMOf2365_2477 Listeria monocytogenes serotype 4b str. F2365 M48 family peptidase YP_015065.1 2535239 R 265669 CDS YP_015066.1 46908677 2798707 complement(2536669..2537874) 1 NC_002973.6 identified by match to protein family HMM PF00877; NLP/P60 family protein 2537874 2798707 LMOf2365_2478 Listeria monocytogenes serotype 4b str. F2365 NLP/P60 family protein YP_015066.1 2536669 R 265669 CDS YP_015067.1 46908678 2798708 complement(2537950..2538834) 1 NC_002973.6 identified by similarity to SP:O34876; match to protein family HMM PF02687; cell division ABC transporter permease FtsX 2538834 ftsX 2798708 ftsX Listeria monocytogenes serotype 4b str. F2365 cell division ABC transporter permease FtsX YP_015067.1 2537950 R 265669 CDS YP_015068.1 46908679 2797107 complement(2538824..2539510) 1 NC_002973.6 identified by similarity to SP:P10115; match to protein family HMM PF00005; cell division ATP-binding protein FtsE 2539510 ftsE 2797107 ftsE Listeria monocytogenes serotype 4b str. F2365 cell division ATP-binding protein FtsE YP_015068.1 2538824 R 265669 CDS YP_015069.1 46908680 2797108 complement(2540017..2540880) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2634; match to protein family HMM PF02588; YitT family protein 2540880 2797108 LMOf2365_2481 Listeria monocytogenes serotype 4b str. F2365 YitT family protein YP_015069.1 2540017 R 265669 CDS YP_015070.1 46908681 2799766 complement(join(2540886..2541914,2541916..2541987)) 1 NC_002973.6 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 2541987 prfB 2799766 prfB Listeria monocytogenes serotype 4b str. F2365 peptide chain release factor 2 YP_015070.1 2540886 R 265669 CDS YP_015071.1 46908682 2797551 complement(2542072..2544585) 1 NC_002973.6 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 2544585 secA 2797551 secA Listeria monocytogenes serotype 4b str. F2365 preprotein translocase subunit SecA YP_015071.1 2542072 R 265669 CDS YP_015072.1 46908683 2797111 complement(2544816..2545379) 1 NC_002973.6 identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; ribosomal subunit interface protein 2545379 yfiA 2797111 yfiA Listeria monocytogenes serotype 4b str. F2365 ribosomal subunit interface protein YP_015072.1 2544816 R 265669 CDS YP_015073.1 46908684 2797112 complement(2545574..2546230) 1 NC_002973.6 identified by similarity to SP:P39147; comFC family protein 2546230 2797112 LMOf2365_2485 Listeria monocytogenes serotype 4b str. F2365 comFC family protein YP_015073.1 2545574 R 265669 CDS YP_015074.1 46908685 2797436 complement(2546223..2547542) 1 NC_002973.6 identified by similarity to SP:P39145; match to protein family HMM PF00271; helicase 2547542 2797436 LMOf2365_2486 Listeria monocytogenes serotype 4b str. F2365 helicase YP_015074.1 2546223 R 265669 CDS YP_015075.1 46908686 2797222 complement(2547738..2548589) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2640; match to protein family HMM PF02645; match to protein family HMM TIGR00762; DegV family protein 2548589 2797222 LMOf2365_2487 Listeria monocytogenes serotype 4b str. F2365 DegV family protein YP_015075.1 2547738 R 265669 CDS YP_015076.1 46908687 2797137 complement(2548610..2549296) 1 NC_002973.6 identified by similarity to SP:P13800; match to protein family HMM PF00072; match to protein family HMM PF00196; DNA-binding response regulator DegU 2549296 degU 2797137 degU Listeria monocytogenes serotype 4b str. F2365 DNA-binding response regulator DegU YP_015076.1 2548610 R 265669 CDS YP_015077.1 46908688 2797138 2549681..2550316 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2642; match to protein family HMM PF01205; match to protein family HMM TIGR00257; hypothetical protein 2550316 2797138 LMOf2365_2489 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015077.1 2549681 D 265669 CDS YP_015078.1 46908689 2797146 2550318..2550863 1 NC_002973.6 identified by similarity to OMNI:EF3079; match to protein family HMM PF00583; acetyltransferase 2550863 2797146 LMOf2365_2490 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_015078.1 2550318 D 265669 CDS YP_015079.1 46908690 2797167 2551039..2552097 1 NC_002973.6 identified by similarity to SP:Q02115; match to protein family HMM PF03816; match to protein family HMM TIGR00350; transcriptional regulator 2552097 2797167 LMOf2365_2491 Listeria monocytogenes serotype 4b str. F2365 transcriptional regulator YP_015079.1 2551039 D 265669 CDS YP_015080.1 46908691 2797180 complement(2552135..2553187) 1 NC_002973.6 identified by match to protein family HMM PF00953; glycoside hydrolase 2553187 2797180 LMOf2365_2492 Listeria monocytogenes serotype 4b str. F2365 glycoside hydrolase YP_015080.1 2552135 R 265669 CDS YP_015081.1 46908692 2797181 complement(2553195..2554319) 1 NC_002973.6 identified by similarity to GP:9955592; match to protein family HMM PF01188; match to protein family HMM PF02746; match to protein family HMM TIGR01928; N-acylamino acid racemase 2554319 2797181 LMOf2365_2493 Listeria monocytogenes serotype 4b str. F2365 N-acylamino acid racemase YP_015081.1 2553195 R 265669 CDS YP_015082.1 46908693 2797200 complement(2554320..2555054) 1 NC_002973.6 identified by similarity to SP:P27620; match to protein family HMM PF03808; match to protein family HMM TIGR00696; teichoic acid biosynthesis protein A 2555054 2797200 LMOf2365_2494 Listeria monocytogenes serotype 4b str. F2365 teichoic acid biosynthesis protein A YP_015082.1 2554320 R 265669 CDS YP_015083.1 46908694 2797211 complement(2555181..2556014) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2648; match to protein family HMM PF01476; LysM domain-containing protein 2556014 2797211 LMOf2365_2495 Listeria monocytogenes serotype 4b str. F2365 LysM domain-containing protein YP_015083.1 2555181 R 265669 CDS YP_015084.1 46908695 2797212 complement(2556405..2556770) 1 NC_002973.6 identified by similarity to SP:P37455; match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein 2556770 ssb-2 2797212 ssb-2 Listeria monocytogenes serotype 4b str. F2365 single-strand binding protein YP_015084.1 2556405 R 265669 CDS YP_015085.1 46908696 2797230 complement(2557021..2557455) 1 NC_002973.6 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 2557455 fabZ 2797230 fabZ Listeria monocytogenes serotype 4b str. F2365 (3R)-hydroxymyristoyl-ACP dehydratase YP_015085.1 2557021 R 265669 CDS YP_015086.1 46908697 2797243 complement(2557478..2558473) 1 NC_002973.6 identified by similarity to SP:P39751; match to protein family HMM TIGR00904; rod shape-determining protein MreB 2558473 2797243 LMOf2365_2498 Listeria monocytogenes serotype 4b str. F2365 rod shape-determining protein MreB YP_015086.1 2557478 R 265669 CDS YP_015087.1 46908698 2797253 complement(2558636..2559928) 1 NC_002973.6 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2559928 murA-1 2797253 murA-1 Listeria monocytogenes serotype 4b str. F2365 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_015087.1 2558636 R 265669 CDS YP_015088.1 46908699 2797262 complement(2560110..2560346) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2653; hypothetical protein 2560346 2797262 LMOf2365_2500 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015088.1 2560110 R 265669 CDS YP_015089.1 46908700 2797263 complement(2560468..2560872) 1 NC_002973.6 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 2560872 atpC 2797263 atpC Listeria monocytogenes serotype 4b str. F2365 F0F1 ATP synthase subunit epsilon YP_015089.1 2560468 R 265669 CDS YP_015090.1 46908701 2797449 complement(2560894..2562315) 1 NC_002973.6 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 2562315 atpD-2 2797449 atpD-2 Listeria monocytogenes serotype 4b str. F2365 F0F1 ATP synthase subunit beta YP_015090.1 2560894 R 265669 CDS YP_015091.1 46908702 2797460 complement(2562376..2563248) 1 NC_002973.6 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 2563248 atpG 2797460 atpG Listeria monocytogenes serotype 4b str. F2365 F0F1 ATP synthase subunit gamma YP_015091.1 2562376 R 265669 CDS YP_015092.1 46908703 2797461 complement(2563286..2564800) 1 NC_002973.6 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 2564800 atpA-2 2797461 atpA-2 Listeria monocytogenes serotype 4b str. F2365 F0F1 ATP synthase subunit alpha YP_015092.1 2563286 R 265669 CDS YP_015093.1 46908704 2797471 complement(2564827..2565366) 1 NC_002973.6 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 2565366 atpH 2797471 atpH Listeria monocytogenes serotype 4b str. F2365 F0F1 ATP synthase subunit delta YP_015093.1 2564827 R 265669 CDS YP_015094.1 46908705 2797498 complement(2565363..2565875) 1 NC_002973.6 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 2565875 atpF 2797498 atpF Listeria monocytogenes serotype 4b str. F2365 F0F1 ATP synthase subunit B YP_015094.1 2565363 R 265669 CDS YP_015095.1 46908706 2797502 complement(2565963..2566181) 1 NC_002973.6 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 2566181 atpE 2797502 atpE Listeria monocytogenes serotype 4b str. F2365 F0F1 ATP synthase subunit C YP_015095.1 2565963 R 265669 CDS YP_015096.1 46908707 2797503 complement(2566253..2566969) 1 NC_002973.6 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 2566969 atpB 2797503 atpB Listeria monocytogenes serotype 4b str. F2365 F0F1 ATP synthase subunit A YP_015096.1 2566253 R 265669 CDS YP_015097.1 46908708 2797514 complement(2566976..2567374) 1 NC_002973.6 identified by similarity to SP:P37816; match to protein family HMM PF05468; ATP synthase I 2567374 atpI 2797514 atpI Listeria monocytogenes serotype 4b str. F2365 ATP synthase I YP_015097.1 2566976 R 265669 CDS YP_015098.1 46908709 2797523 complement(2568205..2569344) 1 NC_002973.6 identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; UDP-N-acetylglucosamine 2-epimerase 2569344 2797523 LMOf2365_2510 Listeria monocytogenes serotype 4b str. F2365 UDP-N-acetylglucosamine 2-epimerase YP_015098.1 2568205 R 265669 CDS YP_015099.1 46908710 2797540 complement(2569462..2570091) 1 NC_002973.6 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 2570091 upp 2797540 upp Listeria monocytogenes serotype 4b str. F2365 uracil phosphoribosyltransferase YP_015099.1 2569462 R 265669 CDS YP_015100.1 46908711 2799723 complement(2570229..2571470) 1 NC_002973.6 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 2571470 glyA 2799723 glyA Listeria monocytogenes serotype 4b str. F2365 serine hydroxymethyltransferase YP_015100.1 2570229 R 265669 CDS YP_015101.1 46908712 2799706 complement(2571606..2572013) 1 NC_002973.6 identified by match to protein family HMM PF01451; low molecular weight phosphotyrosine protein phosphatase 2572013 2799706 LMOf2365_2513 Listeria monocytogenes serotype 4b str. F2365 low molecular weight phosphotyrosine protein phosphatase YP_015101.1 2571606 R 265669 CDS YP_015102.1 46908713 2799707 complement(2572010..2573047) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2667; match to protein family HMM PF01300; match to protein family HMM PF03481; match to protein family HMM TIGR00057; Sua5/YciO/YrdC/YwlC family protein 2573047 2799707 LMOf2365_2514 Listeria monocytogenes serotype 4b str. F2365 Sua5/YciO/YrdC/YwlC family protein YP_015102.1 2572010 R 265669 CDS YP_015103.1 46908714 2798224 complement(2573348..2574199) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2668; match to protein family HMM TIGR00536; HemK family modification methylase 2574199 2798224 LMOf2365_2515 Listeria monocytogenes serotype 4b str. F2365 HemK family modification methylase YP_015103.1 2573348 R 265669 CDS YP_015104.1 46908715 2799795 complement(2574186..2575262) 1 NC_002973.6 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 2575262 prfA 2799795 prfA Listeria monocytogenes serotype 4b str. F2365 peptide chain release factor 1 YP_015104.1 2574186 R 265669 CDS YP_015105.1 46908716 2799800 complement(2575285..2575860) 1 NC_002973.6 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 2575860 2799800 LMOf2365_2517 Listeria monocytogenes serotype 4b str. F2365 thymidine kinase YP_015105.1 2575285 R 265669 CDS YP_015106.1 46908717 2799801 complement(2575972..2576838) 1 NC_002973.6 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 2576838 thrB 2799801 thrB Listeria monocytogenes serotype 4b str. F2365 homoserine kinase YP_015106.1 2575972 R 265669 CDS YP_015107.1 46908718 2799815 complement(2576838..2577893) 1 NC_002973.6 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 2577893 thrC 2799815 thrC Listeria monocytogenes serotype 4b str. F2365 threonine synthase YP_015107.1 2576838 R 265669 CDS YP_015108.1 46908719 2799844 complement(2577896..2579182) 1 NC_002973.6 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 2579182 hom 2799844 hom Listeria monocytogenes serotype 4b str. F2365 homoserine dehydrogenase YP_015108.1 2577896 R 265669 CDS YP_015109.1 46908720 2798513 complement(2579404..2579649) 1 NC_002973.6 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 2579649 rpmE2 2798513 rpmE2 Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L31 YP_015109.1 2579404 R 265669 CDS YP_015110.1 46908721 2798680 complement(2579751..2580188) 1 NC_002973.6 identified by similarity to SP:Q9ZH29; match to protein family HMM PF04138; cell wall teichoic acid glycosylation protein GtcA 2580188 gtcA 2798680 gtcA Listeria monocytogenes serotype 4b str. F2365 cell wall teichoic acid glycosylation protein GtcA YP_015110.1 2579751 R 265669 CDS YP_015111.1 46908722 2798686 complement(2580221..2581492) 1 NC_002973.6 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 2581492 rho 2798686 rho Listeria monocytogenes serotype 4b str. F2365 transcription termination factor Rho YP_015111.1 2580221 R 265669 CDS YP_015112.1 46908723 2798687 complement(2581597..2582868) 1 NC_002973.6 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2582868 murA-2 2798687 murA-2 Listeria monocytogenes serotype 4b str. F2365 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_015112.1 2581597 R 265669 CDS YP_015113.1 46908724 2798692 complement(2582985..2584058) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2680; match to protein family HMM PF03706; match to protein family HMM TIGR00374; hypothetical protein 2584058 2798692 LMOf2365_2525 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015113.1 2582985 R 265669 CDS YP_015114.1 46908725 2798701 complement(2584065..2585075) 1 NC_002973.6 identified by similarity to OMNI:SP1075; match to protein family HMM PF00534; glycosyl transferase CpoA 2585075 2798701 LMOf2365_2526 Listeria monocytogenes serotype 4b str. F2365 glycosyl transferase CpoA YP_015114.1 2584065 R 265669 CDS YP_015115.1 46908726 2798716 complement(2585083..2586366) 1 NC_002973.6 identified by match to protein family HMM PF00534; glycoside hydrolase 2586366 2798716 LMOf2365_2527 Listeria monocytogenes serotype 4b str. F2365 glycoside hydrolase YP_015115.1 2585083 R 265669 CDS YP_015116.1 46908727 2798717 complement(2586687..2587541) 1 NC_002973.6 identified by similarity to SP:P42420; match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01859; fructose-bisphosphate aldolase 2587541 2798717 LMOf2365_2528 Listeria monocytogenes serotype 4b str. F2365 fructose-bisphosphate aldolase YP_015116.1 2586687 R 265669 CDS YP_015117.1 46908728 2798722 complement(2587709..2588629) 1 NC_002973.6 similar to YegS from E. coli; lipid kinase 2588629 2798722 LMOf2365_2529 Listeria monocytogenes serotype 4b str. F2365 lipid kinase YP_015117.1 2587709 R 265669 CDS YP_015118.1 46908729 2798734 2588946..2591258 1 NC_002973.6 identified by match to protein family HMM PF01510; N-acetylmuramoyl-L-alanine amidase 2591258 2798734 LMOf2365_2530 Listeria monocytogenes serotype 4b str. F2365 N-acetylmuramoyl-L-alanine amidase YP_015118.1 2588946 D 265669 CDS YP_015119.1 46908730 2798740 complement(2591311..2592909) 1 NC_002973.6 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 2592909 pyrG 2798740 pyrG Listeria monocytogenes serotype 4b str. F2365 CTP synthetase YP_015119.1 2591311 R 265669 CDS YP_015120.1 46908731 2798741 complement(2593274..2593810) 1 NC_002973.6 participates in both the initiation and recycling phases of transcription; in the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; DNA-directed RNA polymerase subunit delta 2593810 rpoE 2798741 rpoE Listeria monocytogenes serotype 4b str. F2365 DNA-directed RNA polymerase subunit delta YP_015120.1 2593274 R 265669 CDS YP_015121.1 46908732 2798752 complement(2594176..2595846) 1 NC_002973.6 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 2595846 argS 2798752 argS Listeria monocytogenes serotype 4b str. F2365 arginyl-tRNA synthetase YP_015121.1 2594176 R 265669 CDS YP_015122.1 46908733 2798759 complement(2595843..2596277) 1 NC_002973.6 identified by similarity to OMNI:SA0662; hypothetical protein 2596277 2798759 LMOf2365_2534 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015122.1 2595843 R 265669 CDS YP_015123.1 46908734 2798764 complement(2596370..2597023) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2690; match to protein family HMM PF02163; hypothetical protein 2597023 2798764 LMOf2365_2535 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015123.1 2596370 R 265669 CDS YP_015124.1 46908735 2798777 2597097..2597282 1 NC_002973.6 identified by similarity to SP:Q01468; match to protein family HMM PF01361; match to protein family HMM TIGR00013; 4-oxalocrotonate tautomerase 2597282 2798777 LMOf2365_2536 Listeria monocytogenes serotype 4b str. F2365 4-oxalocrotonate tautomerase YP_015124.1 2597097 D 265669 CDS YP_015125.1 46908736 2798778 complement(2597317..2598639) 1 NC_002973.6 identified by similarity to GP:16415246; match to protein family HMM PF01966; HD domain-containing protein 2598639 2798778 LMOf2365_2537 Listeria monocytogenes serotype 4b str. F2365 HD domain-containing protein YP_015125.1 2597317 R 265669 CDS YP_015126.1 46908737 2798785 complement(2598654..2599490) 1 NC_002973.6 identified by match to protein family HMM PF03099; biotin/lipoate A/B protein ligase 2599490 2798785 LMOf2365_2538 Listeria monocytogenes serotype 4b str. F2365 biotin/lipoate A/B protein ligase YP_015126.1 2598654 R 265669 CDS YP_015127.1 46908738 2798792 complement(2599600..2599734) 1 NC_002973.6 hypothetical protein 2599734 2798792 LMOf2365_2539 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015127.1 2599600 R 265669 CDS YP_015128.1 46908739 2798793 complement(2599808..2600008) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2694; hypothetical protein 2600008 2798793 LMOf2365_2540 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015128.1 2599808 R 265669 CDS YP_015129.1 46908740 2798799 complement(2600031..2600354) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2695; match to protein family HMM TIGR01655; hypothetical protein 2600354 2798799 LMOf2365_2541 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015129.1 2600031 R 265669 CDS YP_015130.1 46908741 2798805 complement(2600508..2602148) 1 NC_002973.6 identified by match to protein family HMM PF00496; solute-binding family 5 protein 2602148 2798805 LMOf2365_2542 Listeria monocytogenes serotype 4b str. F2365 solute-binding family 5 protein YP_015130.1 2600508 R 265669 CDS YP_015131.1 46908742 2798810 complement(2602304..2602918) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2697; hypothetical protein 2602918 2798810 LMOf2365_2543 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015131.1 2602304 R 265669 CDS YP_015132.1 46908743 2798811 complement(2602942..2603574) 1 NC_002973.6 identified by similarity to SP:P21369; amidase 2603574 2798811 LMOf2365_2544 Listeria monocytogenes serotype 4b str. F2365 amidase YP_015132.1 2602942 R 265669 CDS YP_015133.1 46908744 2799861 complement(2603575..2604099) 1 NC_002973.6 identified by similarity to SP:P45862; match to protein family HMM PF01872; hypothetical protein 2604099 2799861 LMOf2365_2545 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015133.1 2603575 R 265669 CDS YP_015134.1 46908745 2799858 complement(2604102..2605100) 1 NC_002973.6 identified by match to protein family HMM PF00107; zinc-dependent alcohol dehydrogenase 2605100 2799858 LMOf2365_2546 Listeria monocytogenes serotype 4b str. F2365 zinc-dependent alcohol dehydrogenase YP_015134.1 2604102 R 265669 CDS YP_015135.1 46908746 2799859 complement(2605197..2605469) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2701; hypothetical protein 2605469 2799859 LMOf2365_2547 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015135.1 2605197 R 265669 CDS YP_015136.1 46908747 2799886 complement(2605518..2606429) 1 NC_002973.6 identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 2606429 2799886 LMOf2365_2548 Listeria monocytogenes serotype 4b str. F2365 cation efflux family protein YP_015136.1 2605518 R 265669 CDS YP_015137.1 46908748 2799878 complement(2606807..2607646) 1 NC_002973.6 identified by similarity to GP:15023577; match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; HAD-superfamily cof-like hydrolase 2607646 2799878 LMOf2365_2549 Listeria monocytogenes serotype 4b str. F2365 HAD-superfamily cof-like hydrolase YP_015137.1 2606807 R 265669 CDS YP_015138.1 46908749 2799875 2607749..2608624 1 NC_002973.6 identified by similarity to GP:16415258; match to protein family HMM PF06028; lipoprotein 2608624 2799875 LMOf2365_2550 Listeria monocytogenes serotype 4b str. F2365 lipoprotein YP_015138.1 2607749 D 265669 CDS YP_015139.1 46908750 2799876 2608635..2608928 1 NC_002973.6 identified by similarity to GP:16415259; match to protein family HMM PF02619; match to protein family HMM PF03992; hypothetical protein 2608928 2799876 LMOf2365_2551 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015139.1 2608635 D 265669 CDS YP_015140.1 46908751 2799885 complement(2609153..2609821) 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2609821 2799885 LMOf2365_2552 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_015140.1 2609153 R 265669 CDS YP_015141.1 46908752 2799892 complement(2609821..2610909) 1 NC_002973.6 identified by match to protein family HMM PF02687; ABC transporter permease 2610909 2799892 LMOf2365_2553 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_015141.1 2609821 R 265669 CDS YP_015142.1 46908753 2799893 complement(2610988..2612367) 1 NC_002973.6 identified by similarity to SP:P23545; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 2612367 2799893 LMOf2365_2554 Listeria monocytogenes serotype 4b str. F2365 sensor histidine kinase YP_015142.1 2610988 R 265669 CDS YP_015143.1 46908754 2799184 complement(2612364..2613041) 1 NC_002973.6 identified by similarity to SP:P13792; match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 2613041 2799184 LMOf2365_2555 Listeria monocytogenes serotype 4b str. F2365 DNA-binding response regulator YP_015143.1 2612364 R 265669 CDS YP_015144.1 46908755 2799073 complement(2613088..2613873) 1 NC_002973.6 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 2613873 fdhD 2799073 fdhD Listeria monocytogenes serotype 4b str. F2365 formate dehydrogenase accessory protein YP_015144.1 2613088 R 265669 CDS YP_015145.1 46908756 2799909 complement(2613935..2614411) 1 NC_002973.6 identified by similarity to SP:O05396; hypothetical protein 2614411 2799909 LMOf2365_2557 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015145.1 2613935 R 265669 CDS YP_015146.1 46908757 2799910 complement(2614411..2617398) 1 NC_002973.6 identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01591; formate dehydrogenase subunit alpha 2617398 2799910 LMOf2365_2558 Listeria monocytogenes serotype 4b str. F2365 formate dehydrogenase subunit alpha YP_015146.1 2614411 R 265669 CDS YP_015147.1 46908758 2799911 2617896..2618738 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2714; match to protein family HMM PF01887; hypothetical protein 2618738 2799911 LMOf2365_2559 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015147.1 2617896 D 265669 CDS YP_015148.1 46908759 2799908 complement(2618788..2620269) 1 NC_002973.6 identified by similarity to SP:O35018; match to protein family HMM TIGR00711; lincomycin resistance protein LmrB 2620269 lmrB-2 2799908 lmrB-2 Listeria monocytogenes serotype 4b str. F2365 lincomycin resistance protein LmrB YP_015148.1 2618788 R 265669 CDS YP_015149.1 46908760 2799507 complement(2620370..2621257) 1 NC_002973.6 identified by similarity to SP:O31500; match to protein family HMM PF00440; TetR family transcriptional regulator 2621257 2799507 LMOf2365_2561 Listeria monocytogenes serotype 4b str. F2365 TetR family transcriptional regulator YP_015149.1 2620370 R 265669 CDS YP_015150.1 46908761 2799519 complement(2626939..2627031) 1 NC_002973.6 hypothetical protein 2627031 2799519 LMOf2365_2562 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015150.1 2626939 R 265669 CDS YP_015151.1 46908762 2799520 complement(2627049..2628077) 1 NC_002973.6 identified by similarity to SP:P50863; ATP-binding Mrp/Nbp35 family protein 2628077 2799520 LMOf2365_2563 Listeria monocytogenes serotype 4b str. F2365 ATP-binding Mrp/Nbp35 family protein YP_015151.1 2627049 R 265669 CDS YP_015152.1 46908763 2799528 2628346..2629872 1 NC_002973.6 identified by match to protein family HMM PF01832; N-acetylmuramoyl-L-alanine amidase 2629872 2799528 LMOf2365_2564 Listeria monocytogenes serotype 4b str. F2365 N-acetylmuramoyl-L-alanine amidase YP_015152.1 2628346 D 265669 CDS YP_015153.1 46908764 2799530 complement(2629913..2630764) 1 NC_002973.6 identified by similarity to SP:Q02198; match to protein family HMM PF00248; morphine 6-dehydrogenase 2630764 morA 2799530 morA Listeria monocytogenes serotype 4b str. F2365 morphine 6-dehydrogenase YP_015153.1 2629913 R 265669 CDS YP_015154.1 46908765 2799600 complement(2630786..2631208) 1 NC_002973.6 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 2631208 2799600 LMOf2365_2566 Listeria monocytogenes serotype 4b str. F2365 MerR family transcriptional regulator YP_015154.1 2630786 R 265669 CDS YP_015155.1 46908766 2799601 2631490..2631729 1 NC_002973.6 hypothetical protein 2631729 2799601 LMOf2365_2567 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015155.1 2631490 D 265669 CDS YP_015156.1 46908767 2799597 2631777..2632646 1 NC_002973.6 lipoprotein 2632646 2799597 LMOf2365_2568 Listeria monocytogenes serotype 4b str. F2365 lipoprotein YP_015156.1 2631777 D 265669 CDS YP_015157.1 46908768 2797016 complement(2632787..2633179) 1 NC_002973.6 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 2633179 rpsI 2797016 rpsI Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S9 YP_015157.1 2632787 R 265669 CDS YP_015158.1 46908769 2798086 complement(2633201..2633638) 1 NC_002973.6 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 2633638 rplM 2798086 rplM Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L13 YP_015158.1 2633201 R 265669 CDS YP_015159.1 46908770 2798894 complement(2633833..2634579) 1 NC_002973.6 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 2634579 truA 2798894 truA Listeria monocytogenes serotype 4b str. F2365 tRNA pseudouridine synthase A YP_015159.1 2633833 R 265669 CDS YP_015160.1 46908771 2798895 complement(2634585..2635382) 1 NC_002973.6 identified by match to protein family HMM PF02361; cobalt ABC transporter permease 2635382 2798895 LMOf2365_2572 Listeria monocytogenes serotype 4b str. F2365 cobalt ABC transporter permease YP_015160.1 2634585 R 265669 CDS YP_015161.1 46908772 2797377 complement(2635385..2636251) 1 NC_002973.6 with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene; cobalt transporter ATP-binding subunit 2636251 cbiO 2797377 cbiO Listeria monocytogenes serotype 4b str. F2365 cobalt transporter ATP-binding subunit YP_015161.1 2635385 R 265669 CDS YP_015162.1 46908773 2798070 complement(2636227..2637066) 1 NC_002973.6 with CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene; cobalt transporter ATP-binding subunit 2637066 cbiO 2798070 cbiO Listeria monocytogenes serotype 4b str. F2365 cobalt transporter ATP-binding subunit YP_015162.1 2636227 R 265669 CDS YP_015163.1 46908774 2797410 2637197..2637859 1 NC_002973.6 identified by match to protein family HMM PF02308; MgtC family protein 2637859 2797410 LMOf2365_2575 Listeria monocytogenes serotype 4b str. F2365 MgtC family protein YP_015163.1 2637197 D 265669 CDS YP_015164.1 46908775 2797411 2637980..2638870 1 NC_002973.6 identified by match to protein family HMM PF03069; acetamidase/formamidase 2638870 2797411 LMOf2365_2576 Listeria monocytogenes serotype 4b str. F2365 acetamidase/formamidase YP_015164.1 2637980 D 265669 CDS YP_015165.1 46908776 2798973 complement(2638902..2639996) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2735; hypothetical protein 2639996 2798973 LMOf2365_2577 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015165.1 2638902 R 265669 CDS YP_015166.1 46908777 2799397 complement(2640211..2640618) 1 NC_002973.6 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 2640618 rplQ 2799397 rplQ Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L17 YP_015166.1 2640211 R 265669 CDS YP_015167.1 46908778 2799197 complement(2640635..2641579) 1 NC_002973.6 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 2641579 rpoA 2799197 rpoA Listeria monocytogenes serotype 4b str. F2365 DNA-directed RNA polymerase subunit alpha YP_015167.1 2640635 R 265669 CDS YP_015168.1 46908779 2799198 complement(2641689..2642078) 1 NC_002973.6 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 2642078 rpsK 2799198 rpsK Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S11 YP_015168.1 2641689 R 265669 CDS YP_015169.1 46908780 2798724 complement(2642101..2642466) 1 NC_002973.6 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 2642466 rpsM 2798724 rpsM Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S13 YP_015169.1 2642101 R 265669 CDS YP_015170.1 46908781 2798227 complement(2642485..2642598) 1 NC_002973.6 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 2642598 rpmJ 2798227 rpmJ Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L36 YP_015170.1 2642485 R 265669 CDS YP_015171.1 46908782 2797840 complement(2642702..2642920) 1 NC_002973.6 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 2642920 infA 2797840 infA Listeria monocytogenes serotype 4b str. F2365 translation initiation factor IF-1 YP_015171.1 2642702 R 265669 CDS YP_015172.1 46908783 2797109 complement(2643307..2643954) 1 NC_002973.6 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 2643954 adk 2797109 adk Listeria monocytogenes serotype 4b str. F2365 adenylate kinase YP_015172.1 2643307 R 265669 CDS YP_015173.1 46908784 2797110 complement(2644014..2645309) 1 NC_002973.6 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 2645309 secY 2797110 secY Listeria monocytogenes serotype 4b str. F2365 preprotein translocase subunit SecY YP_015173.1 2644014 R 265669 CDS YP_015174.1 46908785 2797272 complement(2645309..2645749) 1 NC_002973.6 late assembly protein; 50S ribosomal protein L15 2645749 rplO 2797272 rplO Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L15 YP_015174.1 2645309 R 265669 CDS YP_015175.1 46908786 2797276 complement(2645805..2645984) 1 NC_002973.6 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 2645984 rpmD 2797276 rpmD Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L30 YP_015175.1 2645805 R 265669 CDS YP_015176.1 46908787 2797554 complement(2646001..2646504) 1 NC_002973.6 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 2646504 rpsE 2797554 rpsE Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S5 YP_015176.1 2646001 R 265669 CDS YP_015177.1 46908788 2797277 complement(2646526..2646885) 1 NC_002973.6 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 2646885 rplR 2797277 rplR Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L18 YP_015177.1 2646526 R 265669 CDS YP_015178.1 46908789 2797441 complement(2646925..2647461) 1 NC_002973.6 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 2647461 rplF 2797441 rplF Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L6 YP_015178.1 2646925 R 265669 CDS YP_015179.1 46908790 2797442 complement(2647492..2647890) 1 NC_002973.6 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 2647890 rpsH 2797442 rpsH Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S8 YP_015179.1 2647492 R 265669 CDS YP_015180.1 46908791 2797495 complement(2647921..2648106) 1 NC_002973.6 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 2648106 rpsN 2797495 rpsN Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S14 YP_015180.1 2647921 R 265669 CDS YP_015181.1 46908792 2797741 complement(2648138..2648677) 1 NC_002973.6 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 2648677 rplE 2797741 rplE Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L5 YP_015181.1 2648138 R 265669 CDS YP_015182.1 46908793 2797682 complement(2648704..2649015) 1 NC_002973.6 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 2649015 rplX 2797682 rplX Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L24 YP_015182.1 2648704 R 265669 CDS YP_015183.1 46908794 2798210 complement(2649053..2649421) 1 NC_002973.6 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 2649421 rplN 2798210 rplN Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L14 YP_015183.1 2649053 R 265669 CDS YP_015184.1 46908795 2798211 complement(2649501..2649764) 1 NC_002973.6 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 2649764 rpsQ 2798211 rpsQ Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S17 YP_015184.1 2649501 R 265669 CDS YP_015185.1 46908796 2799744 complement(2649791..2649982) 1 NC_002973.6 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 2649982 rpmC 2799744 rpmC Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L29 YP_015185.1 2649791 R 265669 CDS YP_015186.1 46908797 2798264 complement(2649972..2650406) 1 NC_002973.6 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 2650406 rplP 2798264 rplP Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L16 YP_015186.1 2649972 R 265669 CDS YP_015187.1 46908798 2798628 complement(2650409..2651065) 1 NC_002973.6 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 2651065 rpsC 2798628 rpsC Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S3 YP_015187.1 2650409 R 265669 CDS YP_015188.1 46908799 2798706 complement(2651069..2651425) 1 NC_002973.6 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 2651425 rplV 2798706 rplV Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L22 YP_015188.1 2651069 R 265669 CDS YP_015189.1 46908800 2798774 complement(2651446..2651724) 1 NC_002973.6 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 2651724 rpsS 2798774 rpsS Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S19 YP_015189.1 2651446 R 265669 CDS YP_015190.1 46908801 2798775 complement(2651812..2652645) 1 NC_002973.6 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 2652645 rplB 2798775 rplB Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L2 YP_015190.1 2651812 R 265669 CDS YP_015191.1 46908802 2799866 complement(2652686..2652970) 1 NC_002973.6 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 2652970 rplW 2799866 rplW Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L23 YP_015191.1 2652686 R 265669 CDS YP_015192.1 46908803 2799108 complement(2652970..2653593) 1 NC_002973.6 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 2653593 rplD 2799108 rplD Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L4 YP_015192.1 2652970 R 265669 CDS YP_015193.1 46908804 2799502 complement(2653619..2654248) 1 NC_002973.6 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 2654248 rplC 2799502 rplC Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L3 YP_015193.1 2653619 R 265669 CDS YP_015194.1 46908805 2797060 complement(2654283..2654591) 1 NC_002973.6 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 2654591 rpsJ 2797060 rpsJ Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S10 YP_015194.1 2654283 R 265669 CDS YP_015195.1 46908806 2797061 complement(2654953..2655753) 1 NC_002973.6 identified by match to protein family HMM PF02361; cobalt transport protein 2655753 2797061 LMOf2365_2607 Listeria monocytogenes serotype 4b str. F2365 cobalt transport protein YP_015195.1 2654953 R 265669 CDS YP_015196.1 46908807 2799480 complement(2655774..2656733) 1 NC_002973.6 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 2656733 2799480 LMOf2365_2608 Listeria monocytogenes serotype 4b str. F2365 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_015196.1 2655774 R 265669 CDS YP_015197.1 46908808 2798259 complement(2656815..2657897) 1 NC_002973.6 identified by similarity to SP:P41780; match to protein family HMM PF02424; thiamine biosynthesis lipoprotein ApbE 2657897 2798259 LMOf2365_2609 Listeria monocytogenes serotype 4b str. F2365 thiamine biosynthesis lipoprotein ApbE YP_015197.1 2656815 R 265669 CDS YP_015198.1 46908809 2799573 complement(2658061..2658960) 1 NC_002973.6 lipoprotein 2658960 2799573 LMOf2365_2610 Listeria monocytogenes serotype 4b str. F2365 lipoprotein YP_015198.1 2658061 R 265669 CDS YP_015199.1 46908810 2799574 2659408..2661294 1 NC_002973.6 identified by match to protein family HMM PF00070; pyridine nucleotide-disulfide oxidoreductase 2661294 2799574 LMOf2365_2611 Listeria monocytogenes serotype 4b str. F2365 pyridine nucleotide-disulfide oxidoreductase YP_015199.1 2659408 D 265669 CDS YP_015200.1 46908811 2798937 2661470..2661904 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2770; hypothetical protein 2661904 2798937 LMOf2365_2612 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015200.1 2661470 D 265669 CDS YP_015201.1 46908812 2799005 2661937..2662479 1 NC_002973.6 identified by similarity to GP:18145889; hypothetical protein 2662479 2799005 LMOf2365_2613 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015201.1 2661937 D 265669 CDS YP_015202.1 46908813 2799006 2662501..2663481 1 NC_002973.6 identified by match to protein family HMM PF00348; polyprenyl synthetase 2663481 2799006 LMOf2365_2614 Listeria monocytogenes serotype 4b str. F2365 polyprenyl synthetase YP_015202.1 2662501 D 265669 CDS YP_015203.1 46908814 2799618 2663571..2664902 1 NC_002973.6 identified by match to protein family HMM PF00149; serine/threonine protein phosphatase 2664902 2799618 LMOf2365_2615 Listeria monocytogenes serotype 4b str. F2365 serine/threonine protein phosphatase YP_015203.1 2663571 D 265669 CDS YP_015204.1 46908815 2799377 complement(2664949..2665935) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2774; hypothetical protein 2665935 2799377 LMOf2365_2616 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015204.1 2664949 R 265669 CDS YP_015205.1 46908816 2799392 complement(2666041..2666784) 1 NC_002973.6 identified by similarity to GP:8894743; hypothetical protein 2666784 2799392 LMOf2365_2617 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015205.1 2666041 R 265669 CDS YP_015206.1 46908817 2799393 complement(2666785..2667504) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2777; hypothetical protein 2667504 2799393 LMOf2365_2618 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015206.1 2666785 R 265669 CDS YP_015207.1 46908818 2799007 complement(2667464..2668213) 1 NC_002973.6 identified by match to protein family HMM PF02633; creatinine amidohydrolase 2668213 2799007 LMOf2365_2619 Listeria monocytogenes serotype 4b str. F2365 creatinine amidohydrolase YP_015207.1 2667464 R 265669 CDS YP_015208.1 46908819 2798111 complement(2668226..2669218) 1 NC_002973.6 identified by match to protein family HMM PF02126; phosphotriesterase 2669218 2798111 LMOf2365_2620 Listeria monocytogenes serotype 4b str. F2365 phosphotriesterase YP_015208.1 2668226 R 265669 CDS YP_015209.1 46908820 2798112 complement(2669288..2670586) 1 NC_002973.6 membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC 2670586 ulaA 2798112 ulaA Listeria monocytogenes serotype 4b str. F2365 PTS system ascorbate-specific transporter subunit IIC YP_015209.1 2669288 R 265669 CDS YP_015210.1 46908821 2799469 complement(2670613..2670885) 1 NC_002973.6 identified by similarity to OMNI:NTL01BH0223; match to protein family HMM PF02302; PTS system lactose/cellobiose specific transporter subunit IIB 2670885 2799469 LMOf2365_2622 Listeria monocytogenes serotype 4b str. F2365 PTS system lactose/cellobiose specific transporter subunit IIB YP_015210.1 2670613 R 265669 CDS YP_015211.1 46908822 2799428 complement(2670888..2671322) 1 NC_002973.6 identified by match to protein family HMM PF00359; PTS system IIA component domain-containing protein 2671322 2799428 LMOf2365_2623 Listeria monocytogenes serotype 4b str. F2365 PTS system IIA component domain-containing protein YP_015211.1 2670888 R 265669 CDS YP_015212.1 46908823 2798083 complement(2671394..2671489) 1 NC_002973.6 hypothetical protein 2671489 2798083 LMOf2365_2624 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015212.1 2671394 R 265669 CDS YP_015213.1 46908824 2798084 complement(2671515..2673581) 1 NC_002973.6 identified by match to protein family HMM PF00359; match to protein family HMM PF00874; match to protein family HMM PF02302; PTS system transporter subunit IIA 2673581 2798084 LMOf2365_2625 Listeria monocytogenes serotype 4b str. F2365 PTS system transporter subunit IIA YP_015213.1 2671515 R 265669 CDS YP_015214.1 46908825 2799417 complement(2673736..2674218) 1 NC_002973.6 hypothetical protein 2674218 2799417 LMOf2365_2626 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015214.1 2673736 R 265669 CDS YP_015215.1 46908826 2798933 complement(2674215..2674859) 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2674859 2798933 LMOf2365_2627 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_015215.1 2674215 R 265669 CDS YP_015216.1 46908827 2798934 complement(2674871..2675620) 1 NC_002973.6 hypothetical protein 2675620 2798934 LMOf2365_2628 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015216.1 2674871 R 265669 CDS YP_015217.1 46908828 2797401 complement(2675622..2676320) 1 NC_002973.6 hypothetical protein 2676320 2797401 LMOf2365_2629 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015217.1 2675622 R 265669 CDS YP_015218.1 46908829 2797955 complement(2676307..2677092) 1 NC_002973.6 hypothetical protein 2677092 2797955 LMOf2365_2630 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015218.1 2676307 R 265669 CDS YP_015219.1 46908830 2797591 complement(2677158..2677565) 1 NC_002973.6 identified by similarity to GP:528976; hypothetical protein 2677565 2797591 LMOf2365_2631 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015219.1 2677158 R 265669 CDS YP_015220.1 46908831 2797592 complement(2677749..2678936) 1 NC_002973.6 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 2678936 tuf 2797592 tuf Listeria monocytogenes serotype 4b str. F2365 elongation factor Tu YP_015220.1 2677749 R 265669 CDS YP_015221.1 46908832 2799673 complement(2679045..2681132) 1 NC_002973.6 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 2681132 fusA 2799673 fusA Listeria monocytogenes serotype 4b str. F2365 elongation factor G YP_015221.1 2679045 R 265669 CDS YP_015222.1 46908833 2799680 complement(2681198..2681668) 1 NC_002973.6 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 2681668 rpsG 2799680 rpsG Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S7 YP_015222.1 2681198 R 265669 CDS YP_015223.1 46908834 2797571 complement(2681699..2682112) 1 NC_002973.6 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 2682112 rpsL 2797571 rpsL Listeria monocytogenes serotype 4b str. F2365 30S ribosomal protein S12 YP_015223.1 2681699 R 265669 CDS YP_015224.1 46908835 2797586 complement(2682305..2683702) 1 NC_002973.6 dGTPase type 3 subfamily, presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 2683702 dgt 2797586 dgt Listeria monocytogenes serotype 4b str. F2365 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_015224.1 2682305 R 265669 CDS YP_015225.1 46908836 2797587 complement(2683718..2684197) 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 2684197 2797587 LMOf2365_2637 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_015225.1 2683718 R 265669 CDS YP_015226.1 46908837 2797234 2684358..2685827 1 NC_002973.6 identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein 2685827 2797234 LMOf2365_2638 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_015226.1 2684358 D 265669 CDS YP_015227.1 46908838 2799719 complement(2685882..2686526) 1 NC_002973.6 identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; ribulose-phosphate 3-epimerase 2686526 rpe-3 2799719 rpe-3 Listeria monocytogenes serotype 4b str. F2365 ribulose-phosphate 3-epimerase YP_015227.1 2685882 R 265669 CDS YP_015228.1 46908839 2797914 complement(2686523..2688538) 1 NC_002973.6 identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; transketolase 2688538 tkt-3 2797914 tkt-3 Listeria monocytogenes serotype 4b str. F2365 transketolase YP_015228.1 2686523 R 265669 CDS YP_015229.1 46908840 2797915 complement(2688572..2689246) 1 NC_002973.6 identified by match to protein family HMM PF00834; ribulose-phosphate 3-epimerase 2689246 2797915 LMOf2365_2641 Listeria monocytogenes serotype 4b str. F2365 ribulose-phosphate 3-epimerase YP_015229.1 2688572 R 265669 CDS YP_015230.1 46908841 2797913 complement(2689255..2689695) 1 NC_002973.6 identified by similarity to SP:P37351; match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01120; ribose 5-phosphate isomerase B 2689695 rpiB-3 2797913 rpiB-3 Listeria monocytogenes serotype 4b str. F2365 ribose 5-phosphate isomerase B YP_015230.1 2689255 R 265669 CDS YP_015231.1 46908842 2797750 complement(2689890..2690921) 1 NC_002973.6 identified by match to protein family HMM PF00107; zinc-dependent alcohol dehydrogenase 2690921 2797750 LMOf2365_2643 Listeria monocytogenes serotype 4b str. F2365 zinc-dependent alcohol dehydrogenase YP_015231.1 2689890 R 265669 CDS YP_015232.1 46908843 2797791 complement(2690923..2691975) 1 NC_002973.6 identified by match to protein family HMM PF00107; zinc-dependent alcohol dehydrogenase 2691975 2797791 LMOf2365_2644 Listeria monocytogenes serotype 4b str. F2365 zinc-dependent alcohol dehydrogenase YP_015232.1 2690923 R 265669 CDS YP_015233.1 46908844 2797792 complement(2692012..2693283) 1 NC_002973.6 identified by similarity to SP:P37189; match to protein family HMM PF03611; PTS system galactitol-specific transporter subunit IIC 2693283 2797792 LMOf2365_2645 Listeria monocytogenes serotype 4b str. F2365 PTS system galactitol-specific transporter subunit IIC YP_015233.1 2692012 R 265669 CDS YP_015234.1 46908845 2797659 complement(2693344..2693625) 1 NC_002973.6 identified by similarity to SP:P37188; match to protein family HMM PF02302; PTS system galactitol-specific transporter subunit IIB 2693625 2797659 LMOf2365_2646 Listeria monocytogenes serotype 4b str. F2365 PTS system galactitol-specific transporter subunit IIB YP_015234.1 2693344 R 265669 CDS YP_015235.1 46908846 2799816 complement(2693683..2694147) 1 NC_002973.6 identified by match to protein family HMM PF00359; PTS system transporter subunit IIA 2694147 2799816 LMOf2365_2647 Listeria monocytogenes serotype 4b str. F2365 PTS system transporter subunit IIA YP_015235.1 2693683 R 265669 CDS YP_015236.1 46908847 2799817 complement(2694181..2696250) 1 NC_002973.6 identified by match to protein family HMM PF00359; match to protein family HMM PF00874; PTS system IIA component domain-containing protein 2696250 2799817 LMOf2365_2648 Listeria monocytogenes serotype 4b str. F2365 PTS system IIA component domain-containing protein YP_015236.1 2694181 R 265669 CDS YP_015237.1 46908848 2799753 complement(2696620..2697432) 1 NC_002973.6 hypothetical protein 2697432 2799753 LMOf2365_2649 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015237.1 2696620 R 265669 CDS YP_015238.1 46908849 2799778 complement(2697506..2697868) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2801; match to protein family HMM PF04237; hypothetical protein 2697868 2799778 LMOf2365_2650 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015238.1 2697506 R 265669 CDS YP_015239.1 46908850 2799749 complement(2697865..2698233) 1 NC_002973.6 identified by match to protein family HMM PF00903; hypothetical protein 2698233 2799749 LMOf2365_2651 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015239.1 2697865 R 265669 CDS YP_015240.1 46908851 2799750 complement(2698279..2699085) 1 NC_002973.6 identified by match to protein family HMM PF00165; AraC family transcriptional regulator 2699085 2799750 LMOf2365_2652 Listeria monocytogenes serotype 4b str. F2365 AraC family transcriptional regulator YP_015240.1 2698279 R 265669 CDS YP_015241.1 46908852 2798207 2699201..2699671 1 NC_002973.6 identified by match to protein family HMM PF00582; universal stress protein 2699671 2798207 LMOf2365_2653 Listeria monocytogenes serotype 4b str. F2365 universal stress protein YP_015241.1 2699201 D 265669 CDS YP_015242.1 46908853 2798233 2699717..2700172 1 NC_002973.6 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 2700172 rpiB-4 2798233 rpiB-4 Listeria monocytogenes serotype 4b str. F2365 ribose-5-phosphate isomerase B YP_015242.1 2699717 D 265669 CDS YP_015243.1 46908854 2798234 2700371..2700712 1 NC_002973.6 identified by similarity to GP:10119930; hypothetical protein 2700712 2798234 LMOf2365_2655 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015243.1 2700371 D 265669 CDS YP_015244.1 46908855 2798508 2700725..2701981 1 NC_002973.6 identified by match to protein family HMM PF00817; ImpB/MucB/SamB family protein 2701981 2798508 LMOf2365_2656 Listeria monocytogenes serotype 4b str. F2365 ImpB/MucB/SamB family protein YP_015244.1 2700725 D 265669 CDS YP_015245.1 46908856 2798771 complement(2701983..2702795) 1 NC_002973.6 identified by match to protein family HMM PF00561; alpha/beta fold family hydrolase 2702795 2798771 LMOf2365_2657 Listeria monocytogenes serotype 4b str. F2365 alpha/beta fold family hydrolase YP_015245.1 2701983 R 265669 CDS YP_015246.1 46908857 2799869 complement(2702836..2703531) 1 NC_002973.6 identified by similarity to SP:P21866; match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator KdpE 2703531 kdpE 2799869 kdpE Listeria monocytogenes serotype 4b str. F2365 DNA-binding response regulator KdpE YP_015246.1 2702836 R 265669 CDS YP_015247.1 46908858 2799870 complement(2703528..2706218) 1 NC_002973.6 identified by similarity to SP:P94608; match to protein family HMM PF00512; match to protein family HMM PF00582; match to protein family HMM PF02518; match to protein family HMM PF02702; sensor histidine kinase KdpD 2706218 kdpD 2799870 kdpD Listeria monocytogenes serotype 4b str. F2365 sensor histidine kinase KdpD YP_015247.1 2703528 R 265669 CDS YP_015248.1 46908859 2799139 complement(2706234..2706806) 1 NC_002973.6 identified by match to protein family HMM PF02669; match to protein family HMM TIGR00681; K+-transporting ATPase subunit C 2706806 kdpC 2799139 kdpC Listeria monocytogenes serotype 4b str. F2365 K+-transporting ATPase subunit C YP_015248.1 2706234 R 265669 CDS YP_015249.1 46908860 2799195 complement(2706821..2708866) 1 NC_002973.6 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 2708866 kdpB 2799195 kdpB Listeria monocytogenes serotype 4b str. F2365 potassium-transporting ATPase subunit B YP_015249.1 2706821 R 265669 CDS YP_015250.1 46908861 2799100 complement(2708878..2710563) 1 NC_002973.6 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 2710563 kdpA 2799100 kdpA Listeria monocytogenes serotype 4b str. F2365 potassium-transporting ATPase subunit A YP_015250.1 2708878 R 265669 CDS YP_015251.1 46908862 2799318 2710903..2711208 1 NC_002973.6 identified by similarity to SP:P46318; match to protein family HMM PF02302; PTS system beta-glucoside-specific transporter subunit IIB 2711208 2799318 LMOf2365_2663 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIB YP_015251.1 2710903 D 265669 CDS YP_015252.1 46908863 2799319 2711343..2712650 1 NC_002973.6 identified by similarity to SP:P46317; match to protein family HMM PF02378; match to protein family HMM TIGR00410; PTS system beta-glucoside-specific transporter subunit IIC 2712650 2799319 LMOf2365_2664 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIC YP_015252.1 2711343 D 265669 CDS YP_015253.1 46908864 2799332 2712687..2712989 1 NC_002973.6 identified by similarity to SP:P46319; match to protein family HMM PF02255; PTS system beta-glucoside-specific transporter subunit IIA 2712989 2799332 LMOf2365_2665 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIA YP_015253.1 2712687 D 265669 CDS YP_015254.1 46908865 2797022 complement(2713011..2714132) 1 NC_002973.6 identified by match to protein family HMM PF01098; cell cycle protein FtsW 2714132 2797022 LMOf2365_2666 Listeria monocytogenes serotype 4b str. F2365 cell cycle protein FtsW YP_015254.1 2713011 R 265669 CDS YP_015255.1 46908866 2797023 complement(2714129..2715244) 1 NC_002973.6 identified by match to protein family HMM PF01098; cell cycle protein FtsW 2715244 2797023 LMOf2365_2667 Listeria monocytogenes serotype 4b str. F2365 cell cycle protein FtsW YP_015255.1 2714129 R 265669 CDS YP_015256.1 46908867 2798092 complement(2715260..2717830) 1 NC_002973.6 identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01524; magnesium-translocating P-type ATPase 2717830 2798092 LMOf2365_2668 Listeria monocytogenes serotype 4b str. F2365 magnesium-translocating P-type ATPase YP_015256.1 2715260 R 265669 CDS YP_015257.1 46908868 2798943 complement(2718384..2718950) 1 NC_002973.6 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2718950 2798943 LMOf2365_2669 Listeria monocytogenes serotype 4b str. F2365 TetR family transcriptional regulator YP_015257.1 2718384 R 265669 CDS YP_015258.1 46908869 2798962 2719112..2720887 1 NC_002973.6 cell wall hydrolase; muramidase-2 like protein in Enterococcus faecalis; in Enterococcus faecalis a mutant in this gene has no effect on virulence in mouse models; Listeria monocytogenes MurA in involved in general autolysis; contains an N-terminal muramidase domain and C-terminal LysM repeats for cell wall-anchoring; autolysin 2720887 2798962 LMOf2365_2670 Listeria monocytogenes serotype 4b str. F2365 autolysin YP_015258.1 2719112 D 265669 CDS YP_015259.1 46908870 2798963 complement(2721118..2721447) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2821; match to protein family HMM PF06153; hypothetical protein 2721447 2798963 LMOf2365_2671 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015259.1 2721118 R 265669 CDS YP_015260.1 46908871 2799571 complement(2721556..2722182) 1 NC_002973.6 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 2722182 tmk 2799571 tmk Listeria monocytogenes serotype 4b str. F2365 thymidylate kinase YP_015260.1 2721556 R 265669 CDS YP_015261.1 46908872 2798876 complement(2722235..2723614) 1 NC_002973.6 identified by similarity to SP:P37536; match to protein family HMM PF01276; Orn/Lys/Arg decarboxylase 2723614 2798876 LMOf2365_2673 Listeria monocytogenes serotype 4b str. F2365 Orn/Lys/Arg decarboxylase YP_015261.1 2722235 R 265669 CDS YP_015262.1 46908873 2798877 2723798..2724787 1 NC_002973.6 with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 2724787 2798877 LMOf2365_2674 Listeria monocytogenes serotype 4b str. F2365 dihydroxyacetone kinase subunit DhaK YP_015262.1 2723798 D 265669 CDS YP_015263.1 46908874 2798903 2724809..2725405 1 NC_002973.6 identified by similarity to SP:P45510; match to protein family HMM PF02734; dihydroxyacetone kinase, Dak2 subunit 2725405 2798903 LMOf2365_2675 Listeria monocytogenes serotype 4b str. F2365 dihydroxyacetone kinase, Dak2 subunit YP_015263.1 2724809 D 265669 CDS YP_015264.1 46908875 2797117 2725409..2725783 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2826; match to protein family HMM PF03610; PTS system mannnose-specific transporter subunit IIA 2725783 2797117 LMOf2365_2676 Listeria monocytogenes serotype 4b str. F2365 PTS system mannnose-specific transporter subunit IIA YP_015264.1 2725409 D 265669 CDS YP_015265.1 46908876 2798479 2725889..2726740 1 NC_002973.6 identified by match to protein family HMM PF01418; RpiR family phosphosugar-binding transcriptional regulator 2726740 2798479 LMOf2365_2677 Listeria monocytogenes serotype 4b str. F2365 RpiR family phosphosugar-binding transcriptional regulator YP_015265.1 2725889 D 265669 CDS YP_015266.1 46908877 2798480 2726859..2727698 1 NC_002973.6 identified by match to protein family HMM PF00702; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; cof family hydrolase 2727698 2798480 LMOf2365_2678 Listeria monocytogenes serotype 4b str. F2365 cof family hydrolase YP_015266.1 2726859 D 265669 CDS YP_015267.1 46908878 2799049 complement(2727725..2728171) 1 NC_002973.6 identified by match to protein family HMM PF00293; MutT/nudix family protein 2728171 2799049 LMOf2365_2679 Listeria monocytogenes serotype 4b str. F2365 MutT/nudix family protein YP_015267.1 2727725 R 265669 CDS YP_015268.1 46908879 2799683 2728287..2729129 1 NC_002973.6 identified by match to protein family HMM PF00248; aldo/keto reductase oxidoreductase 2729129 2799683 LMOf2365_2680 Listeria monocytogenes serotype 4b str. F2365 aldo/keto reductase oxidoreductase YP_015268.1 2728287 D 265669 CDS YP_015269.1 46908880 2799684 complement(2729175..2729420) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2830; hypothetical protein 2729420 2799684 LMOf2365_2681 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015269.1 2729175 R 265669 CDS YP_015270.1 46908881 2797274 complement(2729435..2730031) 1 NC_002973.6 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 2730031 recR 2797274 recR Listeria monocytogenes serotype 4b str. F2365 recombination protein RecR YP_015270.1 2729435 R 265669 CDS YP_015271.1 46908882 2797275 complement(2730140..2730457) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2832; match to protein family HMM PF02575; match to protein family HMM TIGR00103; hypothetical protein 2730457 2797275 LMOf2365_2683 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015271.1 2730140 R 265669 CDS YP_015272.1 46908883 2797588 complement(2730487..2732226) 1 NC_002973.6 identified by similarity to SP:P09122; match to protein family HMM PF00004; DNA polymerase III subunits gamma and tau 2732226 dnaX 2797588 dnaX Listeria monocytogenes serotype 4b str. F2365 DNA polymerase III subunits gamma and tau YP_015272.1 2730487 R 265669 CDS YP_015273.1 46908884 2797614 complement(2732475..2732939) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2834; hypothetical protein 2732939 2797614 LMOf2365_2685 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015273.1 2732475 R 265669 CDS YP_015274.1 46908885 2797615 complement(2732957..2733139) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2835; hypothetical protein 2733139 2797615 LMOf2365_2686 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015274.1 2732957 R 265669 CDS YP_015275.1 46908886 2797937 complement(2733142..2733363) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2836; hypothetical protein 2733363 2797937 LMOf2365_2687 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015275.1 2733142 R 265669 CDS YP_015276.1 46908887 2798330 complement(2733498..2734862) 1 NC_002973.6 identified by similarity to SP:P17334; match to protein family HMM PF02378; match to protein family HMM TIGR00410; PTS system cellobiose-specific transporter subunit IIC 2734862 2798330 LMOf2365_2688 Listeria monocytogenes serotype 4b str. F2365 PTS system cellobiose-specific transporter subunit IIC YP_015276.1 2733498 R 265669 CDS YP_015277.1 46908888 2798331 2735303..2735458 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2838; hypothetical protein 2735458 2798331 LMOf2365_2689 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015277.1 2735303 D 265669 CDS YP_015278.1 46908889 2799768 complement(2735490..2736131) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2839; hypothetical protein 2736131 2799768 LMOf2365_2690 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015278.1 2735490 R 265669 CDS YP_015279.1 46908890 2799242 complement(2736674..2736769) 1 NC_002973.6 hypothetical protein 2736769 2799242 LMOf2365_2691 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015279.1 2736674 R 265669 CDS YP_015280.1 46908891 2799243 complement(2736828..2738342) 1 NC_002973.6 identified by match to protein family HMM PF00370; match to protein family HMM PF02782; gluconate kinase 2738342 2799243 LMOf2365_2692 Listeria monocytogenes serotype 4b str. F2365 gluconate kinase YP_015280.1 2736828 R 265669 CDS YP_015281.1 46908892 2799226 complement(2738457..2739395) 1 NC_002973.6 hypothetical protein 2739395 2799226 LMOf2365_2693 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015281.1 2738457 R 265669 CDS YP_015282.1 46908893 2797014 complement(2739438..2740385) 1 NC_002973.6 identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein 2740385 2797014 LMOf2365_2694 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_015282.1 2739438 R 265669 CDS YP_015283.1 46908894 2797015 complement(2740528..2742267) 1 NC_002973.6 identified by similarity to SP:P94367; match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 2742267 cydD 2797015 cydD Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_015283.1 2740528 R 265669 CDS YP_015284.1 46908895 2799526 complement(2742267..2743991) 1 NC_002973.6 identified by similarity to SP:P94366; match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 2743991 cydC 2799526 cydC Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_015284.1 2742267 R 265669 CDS YP_015285.1 46908896 2799920 complement(2743991..2745004) 1 NC_002973.6 identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203; cytochrome d ubiquinol oxidase, subunit II 2745004 cydB 2799920 cydB Listeria monocytogenes serotype 4b str. F2365 cytochrome d ubiquinol oxidase, subunit II YP_015285.1 2743991 R 265669 CDS YP_015286.1 46908897 2799513 complement(2744991..2746397) 1 NC_002973.6 identified by similarity to SP:P94364; match to protein family HMM PF01654; cytochrome d ubiquinol oxidase, subunit I 2746397 cydA 2799513 cydA Listeria monocytogenes serotype 4b str. F2365 cytochrome d ubiquinol oxidase, subunit I YP_015286.1 2744991 R 265669 CDS YP_015287.1 46908898 2799269 complement(2746779..2747249) 1 NC_002973.6 identified by match to protein family HMM PF00383; cytidine/deoxycytidylate deaminase 2747249 2799269 LMOf2365_2699 Listeria monocytogenes serotype 4b str. F2365 cytidine/deoxycytidylate deaminase YP_015287.1 2746779 R 265669 CDS YP_015288.1 46908899 2798919 2747444..2749021 1 NC_002973.6 identified by similarity to SP:P39062; match to protein family HMM PF00501; acetyl-coenzyme A synthetase 2749021 acsA 2798919 acsA Listeria monocytogenes serotype 4b str. F2365 acetyl-coenzyme A synthetase YP_015288.1 2747444 D 265669 CDS YP_015289.1 46908900 2798920 complement(2749153..2749785) 1 NC_002973.6 hypothetical protein 2749785 2798920 LMOf2365_2701 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015289.1 2749153 R 265669 CDS YP_015290.1 46908901 2798036 complement(2749802..2751088) 1 NC_002973.6 hypothetical protein 2751088 2798036 LMOf2365_2702 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015290.1 2749802 R 265669 CDS YP_015291.1 46908902 2797378 complement(2751088..2752053) 1 NC_002973.6 identified by similarity to GP:17064986; hypothetical protein 2752053 2797378 LMOf2365_2703 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015291.1 2751088 R 265669 CDS YP_015292.1 46908903 2797379 2752956..2753186 1 NC_002973.6 hypothetical protein 2753186 2797379 LMOf2365_2704 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015292.1 2752956 D 265669 CDS YP_015293.1 46908904 2799566 complement(2753260..2753559) 1 NC_002973.6 hypothetical protein 2753559 2799566 LMOf2365_2705 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015293.1 2753260 R 265669 CDS YP_015294.1 46908905 2799567 complement(2753646..2753801) 1 NC_002973.6 hypothetical protein 2753801 2799567 LMOf2365_2706 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015294.1 2753646 R 265669 CDS YP_015295.1 46908906 2798054 complement(2754033..2754806) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI0397; hypothetical protein 2754806 2798054 LMOf2365_2707 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015295.1 2754033 R 265669 CDS YP_015296.1 46908907 2797394 complement(2754973..2755692) 1 NC_002973.6 identified by similarity to SP:O35000; match to protein family HMM PF01182; 6-phosphogluconolactonase 2755692 2797394 LMOf2365_2708 Listeria monocytogenes serotype 4b str. F2365 6-phosphogluconolactonase YP_015296.1 2754973 R 265669 CDS YP_015297.1 46908908 2797395 2755772..2756506 1 NC_002973.6 identified by similarity to SP:P39075; match to protein family HMM PF00376; multidrug efflux transporter transcriptional regulatory protein 2756506 2797395 LMOf2365_2709 Listeria monocytogenes serotype 4b str. F2365 multidrug efflux transporter transcriptional regulatory protein YP_015297.1 2755772 D 265669 CDS YP_015298.1 46908909 2796994 2756560..2757021 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 2757021 2796994 LMOf2365_2710 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_015298.1 2756560 D 265669 CDS YP_015299.1 46908910 2797713 complement(2757041..2757484) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2853; hypothetical protein 2757484 2797713 LMOf2365_2711 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015299.1 2757041 R 265669 CDS YP_015300.1 46908911 2797714 complement(2757542..2758894) 1 NC_002973.6 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 2758894 2797714 LMOf2365_2712 Listeria monocytogenes serotype 4b str. F2365 MATE efflux family protein YP_015300.1 2757542 R 265669 CDS YP_015301.1 46908912 2797693 complement(2758891..2759340) 1 NC_002973.6 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 2759340 2797693 LMOf2365_2713 Listeria monocytogenes serotype 4b str. F2365 MarR family transcriptional regulator YP_015301.1 2758891 R 265669 CDS YP_015302.1 46908913 2797722 2759510..2760391 1 NC_002973.6 hypothetical protein 2760391 2797722 LMOf2365_2714 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015302.1 2759510 D 265669 CDS YP_015303.1 46908914 2797723 2760476..2760931 1 NC_002973.6 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 2760931 2797723 LMOf2365_2715 Listeria monocytogenes serotype 4b str. F2365 MerR family transcriptional regulator YP_015303.1 2760476 D 265669 CDS YP_015304.1 46908915 2797122 2760931..2761335 1 NC_002973.6 hypothetical protein 2761335 2797122 LMOf2365_2716 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015304.1 2760931 D 265669 CDS YP_015305.1 46908916 2799677 complement(2761378..2761989) 1 NC_002973.6 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; HAD family hydrolase 2761989 2799677 LMOf2365_2717 Listeria monocytogenes serotype 4b str. F2365 HAD family hydrolase YP_015305.1 2761378 R 265669 CDS YP_015306.1 46908917 2799678 complement(2762003..2762371) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2860; hypothetical protein 2762371 2799678 LMOf2365_2718 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015306.1 2762003 R 265669 CDS YP_015307.1 46908918 2797576 complement(2762454..2763206) 1 NC_002973.6 phosphosugar-binding protein 2763206 2797576 LMOf2365_2719 Listeria monocytogenes serotype 4b str. F2365 phosphosugar-binding protein YP_015307.1 2762454 R 265669 CDS YP_015308.1 46908919 2797589 2763372..2765330 1 NC_002973.6 identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427; PTS system fructose-specific transporter subunit IIABC 2765330 2797589 LMOf2365_2720 Listeria monocytogenes serotype 4b str. F2365 PTS system fructose-specific transporter subunit IIABC YP_015308.1 2763372 D 265669 CDS YP_015309.1 46908920 2797590 2765391..2768039 1 NC_002973.6 identified by match to protein family HMM PF01074; glycosyl hydrolase 2768039 2797590 LMOf2365_2721 Listeria monocytogenes serotype 4b str. F2365 glycosyl hydrolase YP_015309.1 2765391 D 265669 CDS YP_015310.1 46908921 2797105 2768041..2769723 1 NC_002973.6 identified by similarity to SP:P76041; match to protein family HMM PF00128; sucrose phosphorylase 2769723 2797105 LMOf2365_2722 Listeria monocytogenes serotype 4b str. F2365 sucrose phosphorylase YP_015310.1 2768041 D 265669 CDS YP_015311.1 46908922 2797083 2769720..2770853 1 NC_002973.6 identified by similarity to SP:P23524; match to protein family HMM PF02595; match to protein family HMM TIGR00045; glycerate kinase 2770853 garK-1 2797083 garK-1 Listeria monocytogenes serotype 4b str. F2365 glycerate kinase YP_015311.1 2769720 D 265669 CDS YP_015312.1 46908923 2797172 complement(2770858..2771814) 1 NC_002973.6 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 2771814 2797172 LMOf2365_2724 Listeria monocytogenes serotype 4b str. F2365 LacI family transcriptional regulator YP_015312.1 2770858 R 265669 CDS YP_015313.1 46908924 2797216 complement(2771882..2773216) 1 NC_002973.6 identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; hypothetical protein 2773216 2797216 LMOf2365_2725 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015313.1 2771882 R 265669 CDS YP_015314.1 46908925 2797217 complement(2773334..2774023) 1 NC_002973.6 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 2774023 2797217 LMOf2365_2726 Listeria monocytogenes serotype 4b str. F2365 NAD-dependent deacetylase YP_015314.1 2773334 R 265669 CDS YP_015315.1 46908926 2797430 complement(2774016..2774306) 1 NC_002973.6 identified by similarity to GP:1770137; hypothetical protein 2774306 2797430 LMOf2365_2727 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015315.1 2774016 R 265669 CDS YP_015316.1 46908927 2797431 complement(2774296..2775504) 1 NC_002973.6 identified by match to protein family HMM PF00083; major facilitator family transporter 2775504 2797431 LMOf2365_2728 Listeria monocytogenes serotype 4b str. F2365 major facilitator family transporter YP_015316.1 2774296 R 265669 CDS YP_015317.1 46908928 2797462 complement(2775621..2775968) 1 NC_002973.6 identified by match to protein family HMM PF00018; SH3 domain-containing protein 2775968 2797462 LMOf2365_2729 Listeria monocytogenes serotype 4b str. F2365 SH3 domain-containing protein YP_015317.1 2775621 R 265669 CDS YP_015318.1 46908929 2797463 complement(2775987..2776631) 1 NC_002973.6 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; translaldolase 2776631 2797463 LMOf2365_2730 Listeria monocytogenes serotype 4b str. F2365 translaldolase YP_015318.1 2775987 R 265669 CDS YP_015319.1 46908930 2799731 complement(2776772..2777461) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2868; match to protein family HMM PF00027; cyclic nucleotide-binding protein 2777461 2799731 LMOf2365_2731 Listeria monocytogenes serotype 4b str. F2365 cyclic nucleotide-binding protein YP_015319.1 2776772 R 265669 CDS YP_015320.1 46908931 2799737 2777791..2779518 1 NC_002973.6 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 2779518 2799737 LMOf2365_2732 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein/permease YP_015320.1 2777791 D 265669 CDS YP_015321.1 46908932 2799738 complement(2779572..2779823) 1 NC_002973.6 identified by similarity to OMNI:NTL01LM2735; match to protein family HMM PF04994; hypothetical protein 2779823 2799738 LMOf2365_2733 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015321.1 2779572 R 265669 CDS YP_015322.1 46908933 2799728 complement(2779843..2781126) 1 NC_002973.6 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 2781126 serS 2799728 serS Listeria monocytogenes serotype 4b str. F2365 seryl-tRNA synthetase YP_015322.1 2779843 R 265669 CDS YP_015323.1 46908934 2797921 complement(2781460..2781879) 1 NC_002973.6 identified by similarity to SP:P80238; general stress protein 26 2781879 2797921 LMOf2365_2735 Listeria monocytogenes serotype 4b str. F2365 general stress protein 26 YP_015323.1 2781460 R 265669 CDS YP_015324.1 46908935 2797922 2782009..2782581 1 NC_002973.6 identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566; glutamine amidotransferase 2782581 2797922 LMOf2365_2736 Listeria monocytogenes serotype 4b str. F2365 glutamine amidotransferase YP_015324.1 2782009 D 265669 CDS YP_015325.1 46908936 2797926 2782578..2784284 1 NC_002973.6 identified by match to protein family HMM PF00425; match to protein family HMM TIGR00553; para-aminobenzoate synthase, component I 2784284 pabB 2797926 pabB Listeria monocytogenes serotype 4b str. F2365 para-aminobenzoate synthase, component I YP_015325.1 2782578 D 265669 CDS YP_015326.1 46908937 2797927 2784446..2786167 1 NC_002973.6 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 2786167 2797927 LMOf2365_2738 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein/permease YP_015326.1 2784446 D 265669 CDS YP_015327.1 46908938 2797928 2786167..2787939 1 NC_002973.6 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein/permease 2787939 2797928 LMOf2365_2739 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein/permease YP_015327.1 2786167 D 265669 CDS YP_015328.1 46908939 2797739 2788119..2789972 1 NC_002973.6 hypothetical protein 2789972 2797739 LMOf2365_2740 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015328.1 2788119 D 265669 CDS YP_015329.1 46908940 2797772 2789983..2790930 1 NC_002973.6 identified by match to protein family HMM PF00535; glycosyl transferase family protein 2790930 2797772 LMOf2365_2741 Listeria monocytogenes serotype 4b str. F2365 glycosyl transferase family protein YP_015329.1 2789983 D 265669 CDS YP_015330.1 46908941 2797773 complement(2791011..2792348) 1 NC_002973.6 identified by similarity to SP:P08750; match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase 2792348 2797773 LMOf2365_2742 Listeria monocytogenes serotype 4b str. F2365 D-alanyl-D-alanine carboxypeptidase YP_015330.1 2791011 R 265669 CDS YP_015331.1 46908942 2797799 complement(2792527..2794194) 1 NC_002973.6 identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976; CocE/NonD family hydrolase 2794194 2797799 LMOf2365_2743 Listeria monocytogenes serotype 4b str. F2365 CocE/NonD family hydrolase YP_015331.1 2792527 R 265669 CDS YP_015332.1 46908943 2797830 complement(2794303..2796456) 1 NC_002973.6 decatenates replicating daughter chromosomes; DNA topoisomerase III 2796456 topB 2797830 topB Listeria monocytogenes serotype 4b str. F2365 DNA topoisomerase III YP_015332.1 2794303 R 265669 CDS YP_015333.1 46908944 2797731 complement(2796480..2798252) 1 NC_002973.6 identified by similarity to SP:P15043; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389; ATP-dependent DNA helicase RecQ 2798252 recQ 2797731 recQ Listeria monocytogenes serotype 4b str. F2365 ATP-dependent DNA helicase RecQ YP_015333.1 2796480 R 265669 CDS YP_015334.1 46908945 2797732 complement(2798413..2799879) 1 NC_002973.6 identified by match to protein family HMM PF00478; match to protein family HMM PF00571; match to protein family HMM TIGR01302; inosine-5'-monophosphate dehydrogenase 2799879 guaB 2797732 guaB Listeria monocytogenes serotype 4b str. F2365 inosine-5'-monophosphate dehydrogenase YP_015334.1 2798413 R 265669 CDS YP_015335.1 46908946 2797733 2800064..2800156 1 NC_002973.6 hypothetical protein 2800156 2797733 LMOf2365_2747 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015335.1 2800064 D 265669 CDS YP_015336.1 46908947 2797795 complement(2800167..2800697) 1 NC_002973.6 identified by match to protein family HMM PF01661; hypothetical protein 2800697 2797795 LMOf2365_2748 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015336.1 2800167 R 265669 CDS YP_015337.1 46908948 2797796 complement(2800755..2802365) 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2802365 2797796 LMOf2365_2749 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_015337.1 2800755 R 265669 CDS YP_015338.1 46908949 2797786 2802721..2802855 1 NC_002973.6 hypothetical protein 2802855 2797786 LMOf2365_2750 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015338.1 2802721 D 265669 CDS YP_015339.1 46908950 2797787 2802883..2804337 1 NC_002973.6 identified by match to protein family HMM PF00232; glycosyl hydrolase 2804337 2797787 LMOf2365_2751 Listeria monocytogenes serotype 4b str. F2365 glycosyl hydrolase YP_015339.1 2802883 D 265669 CDS YP_015340.1 46908951 2797680 2804381..2804683 1 NC_002973.6 identified by similarity to SP:P17409; match to protein family HMM PF02302; PTS system cellobiose-specific transporter subunit IIB 2804683 2797680 LMOf2365_2752 Listeria monocytogenes serotype 4b str. F2365 PTS system cellobiose-specific transporter subunit IIB YP_015340.1 2804381 D 265669 CDS YP_015341.1 46908952 2797666 2804716..2806068 1 NC_002973.6 identified by similarity to SP:P17334; match to protein family HMM PF02378; match to protein family HMM TIGR00410; PTS system cellobiose-specific transporter subunit IIC 2806068 2797666 LMOf2365_2753 Listeria monocytogenes serotype 4b str. F2365 PTS system cellobiose-specific transporter subunit IIC YP_015341.1 2804716 D 265669 CDS YP_015342.1 46908953 2797667 2806080..2806964 1 NC_002973.6 identified by match to protein family HMM PF00480; ROK family protein 2806964 2797667 LMOf2365_2754 Listeria monocytogenes serotype 4b str. F2365 ROK family protein YP_015342.1 2806080 D 265669 CDS YP_015343.1 46908954 2797646 2806957..2807265 1 NC_002973.6 identified by similarity to SP:P46319; match to protein family HMM PF02255; PTS system transporter subunit IIA 2807265 2797646 LMOf2365_2755 Listeria monocytogenes serotype 4b str. F2365 PTS system transporter subunit IIA YP_015343.1 2806957 D 265669 CDS YP_015344.1 46908955 2797695 complement(2807305..2808039) 1 NC_002973.6 identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family phosphosugar-binding transcriptional regulator 2808039 2797695 LMOf2365_2756 Listeria monocytogenes serotype 4b str. F2365 RpiR family phosphosugar-binding transcriptional regulator YP_015344.1 2807305 R 265669 CDS YP_015345.1 46908956 2797696 complement(2808140..2808802) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2890; hypothetical protein 2808802 2797696 LMOf2365_2757 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015345.1 2808140 R 265669 CDS YP_015346.1 46908957 2797704 complement(2808873..2810003) 1 NC_002973.6 hypothetical protein 2810003 2797704 LMOf2365_2758 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015346.1 2808873 R 265669 CDS YP_015347.1 46908958 2797637 complement(2810030..2810917) 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2810917 2797637 LMOf2365_2759 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_015347.1 2810030 R 265669 CDS YP_015348.1 46908959 2797638 2811087..2813417 1 NC_002973.6 Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; bifunctional glutamate--cysteine ligase/glutathione synthetase 2813417 2797638 LMOf2365_2760 Listeria monocytogenes serotype 4b str. F2365 bifunctional glutamate--cysteine ligase/glutathione synthetase YP_015348.1 2811087 D 265669 CDS YP_015349.1 46908960 2797862 complement(2813457..2814905) 1 NC_002973.6 identified by similarity to SP:Q46829; match to protein family HMM PF00232; 6-phospho-beta-glucosidase 2814905 bglA 2797862 bglA Listeria monocytogenes serotype 4b str. F2365 6-phospho-beta-glucosidase YP_015349.1 2813457 R 265669 CDS YP_015350.1 46908961 2797871 complement(2814898..2816751) 1 NC_002973.6 identified by similarity to SP:P40739; match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830; PTS system beta-glucoside-specific transporter subunit IIABC 2816751 2797871 LMOf2365_2762 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIABC YP_015350.1 2814898 R 265669 CDS YP_015351.1 46908962 2797872 complement(2816851..2817696) 1 NC_002973.6 identified by similarity to SP:P39805; match to protein family HMM PF00874; match to protein family HMM PF03123; BigG family transcription antiterminator 2817696 2797872 LMOf2365_2763 Listeria monocytogenes serotype 4b str. F2365 BigG family transcription antiterminator YP_015351.1 2816851 R 265669 CDS YP_015352.1 46908963 2797879 complement(2817852..2818055) 1 NC_002973.6 hypothetical protein 2818055 2797879 LMOf2365_2764 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015352.1 2817852 R 265669 CDS YP_015353.1 46908964 2797886 complement(2818052..2818675) 1 NC_002973.6 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2818675 2797886 LMOf2365_2765 Listeria monocytogenes serotype 4b str. F2365 ABC transporter ATP-binding protein YP_015353.1 2818052 R 265669 CDS YP_015354.1 46908965 2797887 complement(2818668..2820836) 1 NC_002973.6 identified by match to protein family HMM TIGR01654; bacteriocin immunity protein 2820836 2797887 LMOf2365_2766 Listeria monocytogenes serotype 4b str. F2365 bacteriocin immunity protein YP_015354.1 2818668 R 265669 CDS YP_015355.1 46908966 2797897 complement(2820899..2821294) 1 NC_002973.6 identified by similarity to GP:3355782; match to protein family HMM TIGR01653; bacteriocin 2821294 2797897 LMOf2365_2767 Listeria monocytogenes serotype 4b str. F2365 bacteriocin YP_015355.1 2820899 R 265669 CDS YP_015356.1 46908967 2797906 2821895..2823085 1 NC_002973.6 identified by match to protein family HMM PF00083; match to protein family HMM TIGR00710; Bcr/CflA subfamily drug resistance transporter 2823085 2797906 LMOf2365_2768 Listeria monocytogenes serotype 4b str. F2365 Bcr/CflA subfamily drug resistance transporter YP_015356.1 2821895 D 265669 CDS YP_015357.1 46908968 2797907 complement(2823218..2823727) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2897; hypothetical protein 2823727 2797907 LMOf2365_2769 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015357.1 2823218 R 265669 CDS YP_015358.1 46908969 2798301 complement(2824049..2825149) 1 NC_002973.6 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2825149 ychF 2798301 ychF Listeria monocytogenes serotype 4b str. F2365 GTP-dependent nucleic acid-binding protein EngD YP_015358.1 2824049 R 265669 CDS YP_015359.1 46908970 2799823 complement(2825300..2825608) 1 NC_002973.6 identified by similarity to SP:P46319; match to protein family HMM PF02255; PTS system beta-glucoside-specific transporter subunit IIA 2825608 2799823 LMOf2365_2771 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIA YP_015359.1 2825300 R 265669 CDS YP_015360.1 46908971 2799824 complement(2825614..2827884) 1 NC_002973.6 identified by similarity to SP:P33363; match to protein family HMM PF00933; match to protein family HMM PF01915; beta-glucosidase 2827884 bglX-2 2799824 bglX-2 Listeria monocytogenes serotype 4b str. F2365 beta-glucosidase YP_015360.1 2825614 R 265669 CDS YP_015361.1 46908972 2798303 complement(2827919..2828218) 1 NC_002973.6 identified by similarity to SP:P46318; match to protein family HMM PF02302; PTS system beta-glucoside-specific transporter subunit IIB 2828218 2798303 LMOf2365_2773 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIB YP_015361.1 2827919 R 265669 CDS YP_015362.1 46908973 2798304 complement(2828233..2829528) 1 NC_002973.6 PTS system beta-glucoside-specific transporter subunit IIC 2829528 2798304 LMOf2365_2774 Listeria monocytogenes serotype 4b str. F2365 PTS system beta-glucoside-specific transporter subunit IIC YP_015362.1 2828233 R 265669 CDS YP_015363.1 46908974 2798305 complement(2829678..2831594) 1 NC_002973.6 identified by match to protein family HMM PF00359; match to protein family HMM PF00874; PRD domain-containing protein 2831594 2798305 LMOf2365_2775 Listeria monocytogenes serotype 4b str. F2365 PRD domain-containing protein YP_015363.1 2829678 R 265669 CDS YP_015364.1 46908975 2798596 complement(2831805..2833271) 1 NC_002973.6 identified by similarity to SP:P24168; match to protein family HMM PF00199; catalase 2833271 kaT 2798596 kaT Listeria monocytogenes serotype 4b str. F2365 catalase YP_015364.1 2831805 R 265669 CDS YP_015365.1 46908976 2798455 complement(2833420..2833626) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2901; match to protein family HMM PF06107; hypothetical protein 2833626 2798455 LMOf2365_2777 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015365.1 2833420 R 265669 CDS YP_015366.1 46908977 2798456 complement(2833630..2834481) 1 NC_002973.6 identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; ParB family chromosome partioning protein 2834481 2798456 LMOf2365_2778 Listeria monocytogenes serotype 4b str. F2365 ParB family chromosome partioning protein YP_015366.1 2833630 R 265669 CDS YP_015367.1 46908978 2798610 complement(2834474..2835235) 1 NC_002973.6 identified by similarity to SP:P37522; match to protein family HMM PF00991; sporulation initiation inhibitor protein SOJ 2835235 soj 2798610 soj Listeria monocytogenes serotype 4b str. F2365 sporulation initiation inhibitor protein SOJ YP_015367.1 2834474 R 265669 CDS YP_015368.1 46908979 2798313 complement(2835459..2836217) 1 NC_002973.6 identified by match to protein family HMM PF01381; DNA-binding protein 2836217 2798313 LMOf2365_2780 Listeria monocytogenes serotype 4b str. F2365 DNA-binding protein YP_015368.1 2835459 R 265669 CDS YP_015369.1 46908980 2798314 complement(2836376..2836675) 1 NC_002973.6 lipoprotein 2836675 2798314 LMOf2365_2781 Listeria monocytogenes serotype 4b str. F2365 lipoprotein YP_015369.1 2836376 R 265669 CDS YP_015370.1 46908981 2799863 complement(2836687..2837541) 1 NC_002973.6 identified by similarity to SP:P26497; match to protein family HMM PF02195; match to protein family HMM TIGR00180; ParB family chromosome partioning protein 2837541 2799863 LMOf2365_2782 Listeria monocytogenes serotype 4b str. F2365 ParB family chromosome partioning protein YP_015370.1 2836687 R 265669 CDS YP_015371.1 46908982 2799168 complement(2837713..2838519) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2907; match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family phosphosugar-binding transcriptional regulator 2838519 2799168 LMOf2365_2783 Listeria monocytogenes serotype 4b str. F2365 RpiR family phosphosugar-binding transcriptional regulator YP_015371.1 2837713 R 265669 CDS YP_015372.1 46908983 2799169 complement(2838503..2839408) 1 NC_002973.6 identified by match to protein family HMM PF00480; ROK family protein 2839408 2799169 LMOf2365_2784 Listeria monocytogenes serotype 4b str. F2365 ROK family protein YP_015372.1 2838503 R 265669 CDS YP_015373.1 46908984 2799524 complement(2839433..2839879) 1 NC_002973.6 identified by similarity to SP:P32058; match to protein family HMM PF00359; PTS system transporter subunit IIA 2839879 2799524 LMOf2365_2785 Listeria monocytogenes serotype 4b str. F2365 PTS system transporter subunit IIA YP_015373.1 2839433 R 265669 CDS YP_015374.1 46908985 2799579 complement(2839892..2840548) 1 NC_002973.6 identified by similarity to GP:16414878; match to protein family HMM PF00702; match to protein family HMM TIGR01509; HAD superfamily hydrolase 2840548 2799579 LMOf2365_2786 Listeria monocytogenes serotype 4b str. F2365 HAD superfamily hydrolase YP_015374.1 2839892 R 265669 CDS YP_015375.1 46908986 2799580 complement(2840611..2842017) 1 NC_002973.6 identified by similarity to SP:P50852; match to protein family HMM PF02302; match to protein family HMM PF02378; PTS system mannitol-specific transporter subunit IIBC 2842017 mtlA 2799580 mtlA Listeria monocytogenes serotype 4b str. F2365 PTS system mannitol-specific transporter subunit IIBC YP_015375.1 2840611 R 265669 CDS YP_015376.1 46908987 2799598 complement(2842051..2843052) 1 NC_002973.6 identified by similarity to OMNI:SA0196; match to protein family HMM PF01408; match to protein family HMM PF02894; Gfo/Idh/MocA family oxidoreductase 2843052 2799598 LMOf2365_2788 Listeria monocytogenes serotype 4b str. F2365 Gfo/Idh/MocA family oxidoreductase YP_015376.1 2842051 R 265669 CDS YP_015377.1 46908988 2799589 complement(2843072..2843752) 1 NC_002973.6 Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; N-acetylmannosamine-6-phosphate 2-epimerase 2843752 2799589 LMOf2365_2789 Listeria monocytogenes serotype 4b str. F2365 N-acetylmannosamine-6-phosphate 2-epimerase YP_015377.1 2843072 R 265669 CDS YP_015378.1 46908989 2799590 complement(2843969..2844685) 1 NC_002973.6 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 2844685 gidB 2799590 gidB Listeria monocytogenes serotype 4b str. F2365 16S rRNA methyltransferase GidB YP_015378.1 2843969 R 265669 CDS YP_015379.1 46908990 2799604 complement(2844747..2844863) 1 NC_002973.6 hypothetical protein 2844863 2799604 LMOf2365_2791 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015379.1 2844747 R 265669 CDS YP_015380.1 46908991 2796988 complement(2844838..2845104) 1 NC_002973.6 hypothetical protein 2845104 2796988 LMOf2365_2792 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015380.1 2844838 R 265669 CDS YP_015381.1 46908992 2796989 complement(2845106..2845471) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2915; hypothetical protein 2845471 2796989 LMOf2365_2793 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015381.1 2845106 R 265669 CDS YP_015382.1 46908993 2797057 complement(2845464..2846744) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2916; hypothetical protein 2846744 2797057 LMOf2365_2794 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015382.1 2845464 R 265669 CDS YP_015383.1 46908994 2798978 complement(2846750..2847136) 1 NC_002973.6 identified by similarity to GP:16415478; hypothetical protein 2847136 2798978 LMOf2365_2795 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015383.1 2846750 R 265669 CDS YP_015384.1 46908995 2798979 complement(2847264..2847650) 1 NC_002973.6 identified by similarity to GP:16415479; hypothetical protein 2847650 2798979 LMOf2365_2796 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015384.1 2847264 R 265669 CDS YP_015385.1 46908996 2797967 complement(2847778..2848155) 1 NC_002973.6 identified by similarity to GP:16415480; hypothetical protein 2848155 2797967 LMOf2365_2797 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015385.1 2847778 R 265669 CDS YP_015386.1 46908997 2798944 complement(2848585..2849565) 1 NC_002973.6 hypothetical protein 2849565 2798944 LMOf2365_2798 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015386.1 2848585 R 265669 CDS YP_015387.1 46908998 2798945 2851210..2852040 1 NC_002973.6 identified by match to protein family HMM PF01381; DNA-binding protein 2852040 2798945 LMOf2365_2799 Listeria monocytogenes serotype 4b str. F2365 DNA-binding protein YP_015387.1 2851210 D 265669 CDS YP_015388.1 46908999 2798073 complement(2853048..2854946) 1 NC_002973.6 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 2854946 gidA 2798073 gidA Listeria monocytogenes serotype 4b str. F2365 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_015388.1 2853048 R 265669 CDS YP_015389.1 46909000 2798075 complement(2854971..2856344) 1 NC_002973.6 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 2856344 trmE 2798075 trmE Listeria monocytogenes serotype 4b str. F2365 tRNA modification GTPase TrmE YP_015389.1 2854971 R 265669 CDS YP_015390.1 46909001 2798898 2856702..2857520 1 NC_002973.6 identified by match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase 2857520 2798898 LMOf2365_2803 Listeria monocytogenes serotype 4b str. F2365 D-alanyl-D-alanine carboxypeptidase YP_015390.1 2856702 D 265669 CDS YP_015391.1 46909002 2797416 complement(2857576..2858283) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2926; hypothetical protein 2858283 2797416 LMOf2365_2804 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015391.1 2857576 R 265669 CDS YP_015392.1 46909003 2797417 complement(2858307..2858834) 1 NC_002973.6 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 2858834 2797417 LMOf2365_2805 Listeria monocytogenes serotype 4b str. F2365 TetR family transcriptional regulator YP_015392.1 2858307 R 265669 CDS YP_015393.1 46909004 2799076 2858995..2859726 1 NC_002973.6 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 2859726 fabG 2799076 fabG Listeria monocytogenes serotype 4b str. F2365 3-ketoacyl-ACP reductase YP_015393.1 2858995 D 265669 CDS YP_015394.1 46909005 2799189 complement(2859773..2860966) 1 NC_002973.6 major facilitator family transporter 2860966 2799189 LMOf2365_2807 Listeria monocytogenes serotype 4b str. F2365 major facilitator family transporter YP_015394.1 2859773 R 265669 CDS YP_015395.1 46909006 2799190 complement(2861054..2862247) 1 NC_002973.6 identified by similarity to SP:P80092; match to protein family HMM PF01546; match to protein family HMM TIGR01891; carboxypeptidase 2862247 2799190 LMOf2365_2808 Listeria monocytogenes serotype 4b str. F2365 carboxypeptidase YP_015395.1 2861054 R 265669 CDS YP_015396.1 46909007 2798833 complement(2862263..2863663) 1 NC_002973.6 identified by match to protein family HMM PF00083; major facilitator family transporter 2863663 2798833 LMOf2365_2809 Listeria monocytogenes serotype 4b str. F2365 major facilitator family transporter YP_015396.1 2862263 R 265669 CDS YP_015397.1 46909008 2798831 complement(2863663..2864850) 1 NC_002973.6 identified by match to protein family HMM PF01546; match to protein family HMM TIGR01891; M20/M25/M40 family peptidase 2864850 2798831 LMOf2365_2810 Listeria monocytogenes serotype 4b str. F2365 M20/M25/M40 family peptidase YP_015397.1 2863663 R 265669 CDS YP_015398.1 46909009 2798832 complement(2865059..2867401) 1 NC_002973.6 identified by match to protein family HMM PF00165; AraC family transcriptional regulator 2867401 2798832 LMOf2365_2811 Listeria monocytogenes serotype 4b str. F2365 AraC family transcriptional regulator YP_015398.1 2865059 R 265669 CDS YP_015399.1 46909010 2798152 2867614..2870364 1 NC_002973.6 identified by match to protein family HMM PF00560; match to protein family HMM PF00746; match to protein family HMM TIGR01167; cell wall surface anchor family protein 2870364 2798152 LMOf2365_2812 Listeria monocytogenes serotype 4b str. F2365 cell wall surface anchor family protein YP_015399.1 2867614 D 265669 CDS YP_015400.1 46909011 2798153 complement(2870409..2870732) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2934; hypothetical protein 2870732 2798153 LMOf2365_2813 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015400.1 2870409 R 265669 CDS YP_015401.1 46909012 2797278 complement(2870740..2871981) 1 NC_002973.6 identified by similarity to GP:18143712; match to protein family HMM PF06245; hypothetical protein 2871981 2797278 LMOf2365_2814 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015401.1 2870740 R 265669 CDS YP_015402.1 46909013 2797048 complement(2872070..2873281) 1 NC_002973.6 identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-isomer specific 2-hydroxyacid dehydrogenase 2873281 2797048 LMOf2365_2815 Listeria monocytogenes serotype 4b str. F2365 D-isomer specific 2-hydroxyacid dehydrogenase YP_015402.1 2872070 R 265669 CDS YP_015403.1 46909014 2797049 complement(2873250..2874341) 1 NC_002973.6 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 2874341 serC 2797049 serC Listeria monocytogenes serotype 4b str. F2365 phosphoserine aminotransferase YP_015403.1 2873250 R 265669 CDS YP_015404.1 46909015 2799698 complement(2874712..2875860) 1 NC_002973.6 identified by match to protein family HMM PF00083; major facilitator family transporter 2875860 2799698 LMOf2365_2817 Listeria monocytogenes serotype 4b str. F2365 major facilitator family transporter YP_015404.1 2874712 R 265669 CDS YP_015405.1 46909016 2799701 complement(2875874..2876296) 1 NC_002973.6 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 2876296 2799701 LMOf2365_2818 Listeria monocytogenes serotype 4b str. F2365 MarR family transcriptional regulator YP_015405.1 2875874 R 265669 CDS YP_015406.1 46909017 2799702 complement(2876399..2876752) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2940; hypothetical protein 2876752 2799702 LMOf2365_2819 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015406.1 2876399 R 265669 CDS YP_015407.1 46909018 2797952 2876946..2877545 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2941; match to protein family HMM PF00881; hypothetical protein 2877545 2797952 LMOf2365_2820 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015407.1 2876946 D 265669 CDS YP_015408.1 46909019 2797746 complement(2877603..2877923) 1 NC_002973.6 identified by match to protein family HMM PF00085; thioredoxin 2877923 trx-2 2797746 trx-2 Listeria monocytogenes serotype 4b str. F2365 thioredoxin YP_015408.1 2877603 R 265669 CDS YP_015409.1 46909020 2797747 complement(2878046..2878708) 1 NC_002973.6 identified by similarity to SP:P71447; match to protein family HMM PF00702; match to protein family HMM TIGR01509; beta-phosphoglucomutase 2878708 2797747 LMOf2365_2822 Listeria monocytogenes serotype 4b str. F2365 beta-phosphoglucomutase YP_015409.1 2878046 R 265669 CDS YP_015410.1 46909021 2797669 complement(2878705..2879826) 1 NC_002973.6 identified by similarity to SP:P23524; match to protein family HMM PF02595; match to protein family HMM TIGR00045; glycerate kinase 2879826 garK-2 2797669 garK-2 Listeria monocytogenes serotype 4b str. F2365 glycerate kinase YP_015410.1 2878705 R 265669 CDS YP_015411.1 46909022 2797670 complement(2879823..2882000) 1 NC_002973.6 identified by match to protein family HMM PF03632; match to protein family HMM PF03633; match to protein family HMM PF03636; glycosyl transferase family protein 2882000 2797670 LMOf2365_2824 Listeria monocytogenes serotype 4b str. F2365 glycosyl transferase family protein YP_015411.1 2879823 R 265669 CDS YP_015412.1 46909023 2798229 complement(2881997..2883028) 1 NC_002973.6 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; Gfo/Idh/MocA family oxidoreductase 2883028 2798229 LMOf2365_2825 Listeria monocytogenes serotype 4b str. F2365 Gfo/Idh/MocA family oxidoreductase YP_015412.1 2881997 R 265669 CDS YP_015413.1 46909024 2798822 complement(2883085..2883879) 1 NC_002973.6 identified by similarity to SP:P76044; match to protein family HMM PF01261; YcjR protein 2883879 ycjR 2798822 ycjR Listeria monocytogenes serotype 4b str. F2365 YcjR protein YP_015413.1 2883085 R 265669 CDS YP_015414.1 46909025 2798823 complement(2883892..2884944) 1 NC_002973.6 identified by match to protein family HMM PF00107; zinc-dependent alcohol dehydrogenase 2884944 2798823 LMOf2365_2827 Listeria monocytogenes serotype 4b str. F2365 zinc-dependent alcohol dehydrogenase YP_015414.1 2883892 R 265669 CDS YP_015415.1 46909026 2798825 complement(2884963..2885814) 1 NC_002973.6 identified by similarity to SP:P77716; match to protein family HMM PF00528; ABC transporter permease 2885814 2798825 LMOf2365_2828 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_015415.1 2884963 R 265669 CDS YP_015416.1 46909027 2798826 complement(2885801..2886682) 1 NC_002973.6 identified by similarity to SP:P77653; match to protein family HMM PF00528; ABC transporter permease 2886682 2798826 LMOf2365_2829 Listeria monocytogenes serotype 4b str. F2365 ABC transporter permease YP_015416.1 2885801 R 265669 CDS YP_015417.1 46909028 2798827 complement(2886758..2888050) 1 NC_002973.6 identified by match to protein family HMM PF01547; ABC transporter substrate-binding protein 2888050 2798827 LMOf2365_2830 Listeria monocytogenes serotype 4b str. F2365 ABC transporter substrate-binding protein YP_015417.1 2886758 R 265669 CDS YP_015418.1 46909029 2798828 complement(2888047..2889747) 1 NC_002973.6 identified by similarity to SP:P76041; match to protein family HMM PF00128; sucrose phosphorylase 2889747 2798828 LMOf2365_2831 Listeria monocytogenes serotype 4b str. F2365 sucrose phosphorylase YP_015418.1 2888047 R 265669 CDS YP_015419.1 46909030 2798829 2889974..2890999 1 NC_002973.6 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 2890999 2798829 LMOf2365_2832 Listeria monocytogenes serotype 4b str. F2365 LacI family transcriptional regulator YP_015419.1 2889974 D 265669 CDS YP_015420.1 46909031 2798386 complement(2891136..2893130) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2954; hypothetical protein 2893130 2798386 LMOf2365_2833 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015420.1 2891136 R 265669 CDS YP_015421.1 46909032 2798495 complement(2893263..2893787) 1 NC_002973.6 identified by match to protein family HMM PF00583; acetyltransferase 2893787 2798495 LMOf2365_2834 Listeria monocytogenes serotype 4b str. F2365 acetyltransferase YP_015421.1 2893263 R 265669 CDS YP_015422.1 46909033 2798575 2893962..2895374 1 NC_002973.6 identified by match to protein family HMM PF00083; major facilitator family transporter 2895374 2798575 LMOf2365_2835 Listeria monocytogenes serotype 4b str. F2365 major facilitator family transporter YP_015422.1 2893962 D 265669 CDS YP_015423.1 46909034 2798576 complement(2895415..2895729) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2957; hypothetical protein 2895729 2798576 LMOf2365_2836 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015423.1 2895415 R 265669 CDS YP_015424.1 46909035 2799052 complement(2895742..2896563) 1 NC_002973.6 identified by similarity to SP:P32169; match to protein family HMM PF00596; rhamnulose-1-phosphate aldolase 2896563 rhaD 2799052 rhaD Listeria monocytogenes serotype 4b str. F2365 rhamnulose-1-phosphate aldolase YP_015424.1 2895742 R 265669 CDS YP_015425.1 46909036 2799053 complement(2896576..2897838) 1 NC_002973.6 catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase 2897838 rhaA 2799053 rhaA Listeria monocytogenes serotype 4b str. F2365 L-rhamnose isomerase YP_015425.1 2896576 R 265669 CDS YP_015426.1 46909037 2797011 complement(2897851..2899302) 1 NC_002973.6 identified by similarity to SP:P32171; match to protein family HMM PF00370; rhamnulokinase 2899302 rhaB 2797011 rhaB Listeria monocytogenes serotype 4b str. F2365 rhamnulokinase YP_015426.1 2897851 R 265669 CDS YP_015427.1 46909038 2798240 complement(2899321..2900589) 1 NC_002973.6 identified by similarity to SP:P42417; match to protein family HMM PF00083; sugar transporter 2900589 2798240 LMOf2365_2840 Listeria monocytogenes serotype 4b str. F2365 sugar transporter YP_015427.1 2899321 R 265669 CDS YP_015428.1 46909039 2798241 2900712..2901692 1 NC_002973.6 identified by match to protein family HMM PF00165; match to protein family HMM PF02311; AraC family transcriptional regulator 2901692 2798241 LMOf2365_2841 Listeria monocytogenes serotype 4b str. F2365 AraC family transcriptional regulator YP_015428.1 2900712 D 265669 CDS YP_015429.1 46909040 2798956 complement(2901742..2902203) 1 NC_002973.6 identified by similarity to OMNI:NTL01LI2963; match to protein family HMM PF06171; hypothetical protein 2902203 2798956 LMOf2365_2842 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015429.1 2901742 R 265669 CDS YP_015430.1 46909041 2798103 complement(2902258..2902878) 1 NC_002973.6 identified by match to protein family HMM PF00013; match to protein family HMM PF01424; RNA-binding protein 2902878 2798103 LMOf2365_2843 Listeria monocytogenes serotype 4b str. F2365 RNA-binding protein YP_015430.1 2902258 R 265669 CDS YP_015431.1 46909042 2798104 complement(2902875..2903738) 1 NC_002973.6 identified by similarity to SP:Q01625; match to protein family HMM PF02096; SpoJ protein 2903738 2798104 LMOf2365_2844 Listeria monocytogenes serotype 4b str. F2365 SpoJ protein YP_015431.1 2902875 R 265669 CDS YP_015432.1 46909043 2798883 complement(2903779..2904138) 1 NC_002973.6 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 2904138 rnpA 2798883 rnpA Listeria monocytogenes serotype 4b str. F2365 ribonuclease P YP_015432.1 2903779 R 265669 CDS YP_015433.1 46909044 2799622 complement(2904228..2904362) 1 NC_002973.6 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 2904362 rpmH 2799622 rpmH Listeria monocytogenes serotype 4b str. F2365 50S ribosomal protein L34 YP_015433.1 2904228 R 265669 CDS YP_015434.1 46909045 2799623 complement(2904530..2905000) 1 NC_002973.6 identified by similarity to GP:2695687; hypothetical protein 2905000 2799623 LMOf2365_2847 Listeria monocytogenes serotype 4b str. F2365 hypothetical protein YP_015434.1 2904530 R 265669 CDS